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The list of neighbours is sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Each neighbour has links to pairwise structural alignment with the query structure, to pre-computed structural neighbours in the Dali Database,
and to the PDB format coordinate file where the neighbour
is superimposed onto the query structure.
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Summary
No: Chain Z rmsd lali nres %id PDB Description
1: 2rgn-B 16.5 3.4 177 327 20 PDB MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(Q) SUBUNIT
Pairwise Structural Alignments
Notation: three-state secondary structure definitions by DSSP (reduced to H=helix, E=sheet, L=coil) are shown above the amino acid sequence. Structurally equivalent residues are in uppercase, structurally non-equivalent residues (e.g. in loops) are in lowercase. Amino acid identities are marked by vertical bars.
No 1: Query=mol1A Sbjct=2rgnB Z-score=16.5
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DSSP ---------LHHHHHHHHHHHHHHHHHHHHHHHHHHHLHHHHHHHHHhhllllHHHHHHH Query ---------QSRALVIAQELLSSEKAYVEXLQHLNLDFHGAVXRALDdxdhedTLAREEL 51 ident | || || || | | Sbjct seeeqkkkaLERSMYVLSELVETEKMYVDDLGQIVEGYMATMAAQGV-----pESLRGRD 55 DSSP llhhhhlhhHHHHHHHHHHHHHHHHHHHHHHHHHHLLHHHHHHHHLL-----lLLLHHHH DSSP HHHHHHHHHHHHHHH-HHHHHHHHHHHLLlllLLLLHHHHLLLLLHHHHHHHHHHHHHHH Query RQGLSELPAIHDLHQ-GILEELEERLSNWesqQKVADVFLAREQGFDHHATHILQFDRYL 110 ident | | | | || | | | | Sbjct RIVFGNIQQIYEWHRdYFLQELQRCLKDP---DWLAQLFIKHERRLHMYVVYCQNKPKSE 112 DSSP HHHHLLHHHHHHHHHhLHHHHHHHHHLLH---HHHHHHHHHLLLLLHHHHHHHHLLHHHH DSSP HHHHHHHllLHHHHHHHHHHHLL-LHHHHHHHHHHHHHHHHHHHHHHHLLL-LLLLHhHH Query GLLSENClhSPRLAAAVREFEQS-TAKHRLLRVVQRLFQYQVLLTDYLNNL-CPDSAeYD 168 ident || | ||| || || | | Sbjct HVVSEFG--DSYFEELRQQLGHRlQLNDLLIKPVQRIMKYQLLLKDFLKYYnRAGMD-TA 169 DSSP HHHLLLL--HHHHHHHHHHHLLLlLHHHHLLHHHHHHLLHHHHHHHHHHHLlLLLLL-HH DSSP HHHHHHHHHHHHHHHHHHHLL-----------------------lhhhhhhhhhhhhhee Query NTQGALSLISKVTDRANDSXE-----------------------qgenlqklvhiehsvr 205 ident | | | || Sbjct DLEQAVEVMCFVPKRCNDMMTlgrlrgfegkltaqgkllgqdtfwvtepsrgrerrvflf 229 DSSP HHHHHHHHHHHHHHHHHHHHHhhhllllllllllllleeeeeeeeeelllllleeeeeee DSSP llllllllllleeelleeeeeelleeeeeeeeeelleeeeeeellllleeeeeeeellll Query gqgdllqpgreflkegtlxkvtgknrrprhlflxndvllytypqkdgkyrlkntlavsrp 265 ident Sbjct eqiiifsealgpgyvyknsikvsclglegnlqgdpcrfaltsrgpeggiqryvlqaadpa 289 DSSP lleeeeeeelllleeeeeeeehhheeeeelhhhllleeeeeeellllleeeeeeeellhh DSSP llllllleeeeelllleeeeelllhhhhhhhhhhhhhl Query vxekvpyalkietsesclxlsasscaerdewygclsra 303 ident Sbjct isqawikhvaqilesqrdflnalqspieyqrresqtns 327 DSSP hhhhhhhhhhhhhhhhhhhhhhhllhhhhhhhhhhhhl