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The list of neighbours is sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.
Each neighbour has links to pairwise structural alignment with the query structure, to pre-computed structural neighbours in the Dali Database,
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Summary
No: Chain Z rmsd lali nres %id PDB Description
1: 1jwq-A 24.7 1.7 176 179 34 PDB MOLECULE: N-ACETYLMURAMOYL-L-ALANINE AMIDASE CWLV;
Pairwise Structural Alignments
Notation: three-state secondary structure definitions by DSSP (reduced to H=helix, E=sheet, L=coil) are shown above the amino acid sequence. Structurally equivalent residues are in uppercase, structurally non-equivalent residues (e.g. in loops) are in lowercase. Amino acid identities are marked by vertical bars.
No 1: Query=mol1A Sbjct=1jwqA Z-score=24.7
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DSSP lLEEEEEEELLLLLLLLLLL-LLLLLHHHHHHHHHHHHHHHHHHLLLEEEEELLLLLLLL Query aSFRVVLDPGHGGIDGGARG-VTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFL 59 ident || | ||| | || | || || | | | ||| | || Sbjct -MKVVVIDAGHGAKDSGAVGiSRKNYEKTFNLAMALKVESILKQNPKLEVVLTRSDDTFL 59 DSSP -LEEEEEEELLLLLLLLLLLlLLLLLHHHHHHHHHHHHHHHHHLLLLEEEEELLLLLLLL DSSP LHHHHHHHHHHLLLLEEEEEELLLLLLLLLLLEEEEEEllllllhhhhhhhhhhhhhhhh Query RLSERVKKAQEFDADLFISIHADTIDVHSLRGATVYTIsdeasdaiakslaesenkvdll 119 ident | ||| | | | |||| | | Sbjct ELKQRVKVAENLKANVFVSIHANSSGSSASNGTETYYQ---------------------- 97 DSSP LHHHHHHHHHHLLLLEEEEEEEELLLLLLLLLEEEEEL---------------------- DSSP hllllllhhhhhhhhhhHHHHHHHHHHHHHHHHHLlLLEEEeEEEEELLHHHLLLLLLEE Query dglpkedilldltrretHAFSINFANNVVSNLSKShINLINnPHRYADFQVLKAPDVPSV 179 ident | ||| || | | | | Sbjct -----------------RSASKAFANVMHKYFAPAtGLTDR-GIRYGNFHVIRETTMPAV 139 DSSP -----------------LHHHHHHHHHHHHHHHHHhLLLEE-EEEELLLHHHHLLLLLEE DSSP EEELLLLLLHHHHHHHLLHHHHHHHHHHHHHHHHHHHHHhlllllll Query LIEIGYLSNKEDEKLLNNPQWRKQXAASIAYSIRQFAEYrqkixqpl 226 ident | | ||||| | | | || | Sbjct LLEVGYLSNAKEEATLFDEDFQNRVAQGIADGITEYLDV-------k 179 DSSP EEEEEELLLHHHHHHHLLHHHHHHHHHHHHHHHHHHHLL-------l