P09429 HMGB1_HUMAN
Gene name: HMGB1
Protein name: High mobility group protein B1
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biological process involved in symbiotic interaction GO:0044403
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cell adhesion GO:0007155
- cell death GO:0008219
- cell differentiation GO:0030154
- cell population proliferation GO:0008283
- cell-cell signaling GO:0007267
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- cellular protein modification process GO:0006464
- chromosome organization GO:0051276
- DNA metabolic process GO:0006259
- homeostatic process GO:0042592
- immune system process GO:0002376
- nucleobase-containing compound catabolic process GO:0034655
- protein transport GO:0015031
- protein-containing complex assembly GO:0065003
- response to stress GO:0006950
- signal transduction GO:0007165
- transport GO:0006810
- vesicle-mediated transport GO:0016192
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
# | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
---|---|---|---|---|
1 | Q58FF8 | HSP90AB2P | 0.86705 |
protein folding
GO:0006457 response to stress GO:0006950 |
2 | Q9NRF9 | POLE3 | 0.85006 |
biosynthetic process
GO:0009058 cell cycle GO:0007049 cellular component assembly GO:0022607 ... |
3 | Q15061 | WDR43 | 0.83458 |
biosynthetic process
GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ribosome biogenesis GO:0042254 |
4 | Q58FF3 | HSP90B2P | 0.82439 |
catabolic process
GO:0009056 protein folding GO:0006457 response to stress GO:0006950 |
5 | Q13562 | NEUROD1 | 0.82436 |
anatomical structure development
GO:0048856 biosynthetic process GO:0009058 cell cycle GO:0007049 ... |
6 | P55209 | NAP1L1 | 0.82082 |
anatomical structure development
GO:0048856 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
7 | Q9HC10 | OTOF | 0.79024 |
cell-cell signaling
GO:0007267 cellular component assembly GO:0022607 membrane organization GO:0061024 ... |
8 | Q01105 | SET | 0.7883 |
biological process involved in symbiotic interaction
GO:0044403 biosynthetic process GO:0009058 catabolic process GO:0009056 ... |
9 | P0C2Y1 | NBPF7 | 0.77461 | |
10 | Q9UKP3 | ITGB1BP2 | 0.77226 |
anatomical structure development
GO:0048856 signal transduction GO:0007165 |
20 40 60 80 100
AA: MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPS
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDD..........DDDDDDDDDDDDDDD.............................................DDDDDDDDD......
DO_IUPRED2A: DDDDDDDD..DD.................DDDDD.....................DDD.D..DDDDD...DDDDDDDD...DDDDDDDDDDDDDD.....
DO_SPOTD: DDDDDDDDDD...............................................................DDDDDDDDDDDDDDDDDDDDDDD....
CONSENSUS: DDDDDDDDDDDD.................DDDDD.......................................DDDDDDDDDDDDDDDDDDDDDD.....
CONSENSUS_MOBI: ....................................................................................................
RICH_[K]: KgdpKKprgK KtyippKgetKKKfK
RICH_[GK]: GKGdpKKprG
RICH_[KP]: KtyiPPKgetKKKfKdPnaP
120 140 160 180 200
AA: AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE
STMI:
DO_DISOPRED3: ...................................DDDDDDDDDDDDDDDDDD............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: ...............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD......DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD: ................................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: ...................................DDDDDDDDDDDDDDDD.............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ..................................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
RICH_[D]: DeeDeeDeeee
RICH_[E]: EkskkkkEEEEdEEdEEdEEEE
RICH_[K]: KqpyeKKaaK KgKpdaaKKgvvKaeKsKKKK
RICH_[DE]: EEEEDEEDEEDEEEE
RICH_[EK]: KKgvvKaEKsKKKKEEEEdEEdEEdEEEE
RICH_fLPS_[D]: DeeDeeDeeee
RICH_fLPS_[E]: EEEEdEEdEEdEEEE
RICH_fLPS_[K]: KgKpdaaKKgvvKaeKsKKKK
RICH_fLPS_[ED]: EEEEDEEDEEDEEEE
RICH_MOBI_[D]: DeeDeeDeeee
RICH_MOBI_[E]: EkskkkkEEEEdEEdEEdEEEE
RICH_MOBI_[K]: KpdaaKKgvvKaeKsKKKK
RICH_MOBI_[DE]: EEEEDEEDEEDEEEE
RICH_MOBI_[EK]: KKgvvKaEKsKKKKEEEEdEEdEEdEEEE
RICH_MOBI_[KV]: KpdaaKKgVVKaeKsKKK
RICH_fLPS_MOBI_[D]: DeeDeeDeeee
RICH_fLPS_MOBI_[E]: EEEEdEEdEEdEEEE
RICH_fLPS_MOBI_[K]: KpdaaKKgvvKaeKsKKKKe
RICH_fLPS_MOBI_[ED]: EEEEDEEDEEDEEEE
AA: EDEEDEDEEEDDDDE
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDD
DO_IUPRED2A: DDDDDDDDDDDDDDD
DO_SPOTD: DDDDDDDDDDDDDDD
CONSENSUS: DDDDDDDDDDDDDDD
CONSENSUS_MOBI: DDDDDDDDDDDDDDD
RICH_[D]: eDeeDeDeeeDDDD
RICH_[E]: EdEEdEdEEEddddE
RICH_[DE]: EDEEDEDEEEDDDDE
RICH_[EK]: E
RICH_fLPS_[D]: eDeeDeDeeeDDDD
RICH_fLPS_[E]: EdEEdEdEEE
RICH_fLPS_[ED]: EDEEDEDEEEDDDDE
RICH_MOBI_[D]: eDeeDeDeeeDDDD
RICH_MOBI_[E]: EdEEdEdEEEddddE
RICH_MOBI_[DE]: EDEEDEDEEEDDDDE
RICH_MOBI_[EK]: E
RICH_fLPS_MOBI_[D]: eDeeDeDeeeDDDD
RICH_fLPS_MOBI_[E]: EdEEdEdEEE
RICH_fLPS_MOBI_[ED]: EDEEDEDEEEDDDDE