P09429 HMGB1_HUMAN
Gene name: HMGB1
Protein name: High mobility group protein B1
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biological process involved in symbiotic interaction GO:0044403
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cell adhesion GO:0007155
- cell death GO:0008219
- cell differentiation GO:0030154
- cell population proliferation GO:0008283
- cell-cell signaling GO:0007267
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- cellular protein modification process GO:0006464
- chromosome organization GO:0051276
- DNA metabolic process GO:0006259
- homeostatic process GO:0042592
- immune system process GO:0002376
- nucleobase-containing compound catabolic process GO:0034655
- protein transport GO:0015031
- protein-containing complex assembly GO:0065003
- response to stress GO:0006950
- signal transduction GO:0007165
- transport GO:0006810
- vesicle-mediated transport GO:0016192
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q58FF8 | HSP90AB2P | 0.86705 | protein folding GO:0006457 response to stress GO:0006950 |
| 2 | Q9NRF9 | POLE3 | 0.85006 | biosynthetic process GO:0009058 cell cycle GO:0007049 cellular component assembly GO:0022607 ... |
| 3 | Q15061 | WDR43 | 0.83458 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ribosome biogenesis GO:0042254 |
| 4 | Q58FF3 | HSP90B2P | 0.82439 | catabolic process GO:0009056 protein folding GO:0006457 response to stress GO:0006950 |
| 5 | Q13562 | NEUROD1 | 0.82436 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell cycle GO:0007049 ... |
| 6 | P55209 | NAP1L1 | 0.82082 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
| 7 | Q9HC10 | OTOF | 0.79024 | cell-cell signaling GO:0007267 cellular component assembly GO:0022607 membrane organization GO:0061024 ... |
| 8 | Q01105 | SET | 0.7883 | biological process involved in symbiotic interaction GO:0044403 biosynthetic process GO:0009058 catabolic process GO:0009056 ... |
| 9 | P0C2Y1 | NBPF7 | 0.77461 | |
| 10 | Q9UKP3 | ITGB1BP2 | 0.77226 | anatomical structure development GO:0048856 signal transduction GO:0007165 |
20 40 60 80 100 AA: MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPS STMI: DO_DISOPRED3: DDDDDDDDDDDDDDD..........DDDDDDDDDDDDDDD.............................................DDDDDDDDD...... DO_IUPRED2A: DDDDDDDD..DD.................DDDDD.....................DDD.D..DDDDD...DDDDDDDD...DDDDDDDDDDDDDD..... DO_SPOTD: DDDDDDDDDD...............................................................DDDDDDDDDDDDDDDDDDDDDDD.... CONSENSUS: DDDDDDDDDDDD.................DDDDD.......................................DDDDDDDDDDDDDDDDDDDDDD..... CONSENSUS_MOBI: .................................................................................................... RICH_[K]: KgdpKKprgK KtyippKgetKKKfK RICH_[GK]: GKGdpKKprG RICH_[KP]: KtyiPPKgetKKKfKdPnaP
120 140 160 180 200 AA: AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE STMI: DO_DISOPRED3: ...................................DDDDDDDDDDDDDDDDDD............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ...............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD......DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: ................................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: ...................................DDDDDDDDDDDDDDDD.............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ..................................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[D]: DeeDeeDeeee RICH_[E]: EkskkkkEEEEdEEdEEdEEEE RICH_[K]: KqpyeKKaaK KgKpdaaKKgvvKaeKsKKKK RICH_[DE]: EEEEDEEDEEDEEEE RICH_[EK]: KKgvvKaEKsKKKKEEEEdEEdEEdEEEE RICH_fLPS_[D]: DeeDeeDeeee RICH_fLPS_[E]: EEEEdEEdEEdEEEE RICH_fLPS_[K]: KgKpdaaKKgvvKaeKsKKKK RICH_fLPS_[ED]: EEEEDEEDEEDEEEE RICH_MOBI_[D]: DeeDeeDeeee RICH_MOBI_[E]: EkskkkkEEEEdEEdEEdEEEE RICH_MOBI_[K]: KpdaaKKgvvKaeKsKKKK RICH_MOBI_[DE]: EEEEDEEDEEDEEEE RICH_MOBI_[EK]: KKgvvKaEKsKKKKEEEEdEEdEEdEEEE RICH_MOBI_[KV]: KpdaaKKgVVKaeKsKKK RICH_fLPS_MOBI_[D]: DeeDeeDeeee RICH_fLPS_MOBI_[E]: EEEEdEEdEEdEEEE RICH_fLPS_MOBI_[K]: KpdaaKKgvvKaeKsKKKKe RICH_fLPS_MOBI_[ED]: EEEEDEEDEEDEEEE
AA: EDEEDEDEEEDDDDE STMI: DO_DISOPRED3: DDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDD CONSENSUS_MOBI: DDDDDDDDDDDDDDD RICH_[D]: eDeeDeDeeeDDDD RICH_[E]: EdEEdEdEEEddddE RICH_[DE]: EDEEDEDEEEDDDDE RICH_[EK]: E RICH_fLPS_[D]: eDeeDeDeeeDDDD RICH_fLPS_[E]: EdEEdEdEEE RICH_fLPS_[ED]: EDEEDEDEEEDDDDE RICH_MOBI_[D]: eDeeDeDeeeDDDD RICH_MOBI_[E]: EdEEdEdEEEddddE RICH_MOBI_[DE]: EDEEDEDEEEDDDDE RICH_MOBI_[EK]: E RICH_fLPS_MOBI_[D]: eDeeDeDeeeDDDD RICH_fLPS_MOBI_[E]: EdEEdEdEEE RICH_fLPS_MOBI_[ED]: EDEEDEDEEEDDDDE