P11047 LAMC1_HUMAN
Gene name: LAMC1
Protein name: Laminin subunit gamma-1
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- cell adhesion GO:0007155
- cell differentiation GO:0030154
- cell junction organization GO:0034330
- cell morphogenesis GO:0000902
- cell population proliferation GO:0008283
- cellular component assembly GO:0022607
- cellular protein modification process GO:0006464
- extracellular matrix organization GO:0030198
- homeostatic process GO:0042592
- protein-containing complex assembly GO:0065003
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q7Z4R8 | C6orf120 | 0.86193 | cell death GO:0008219 immune system process GO:0002376 transport GO:0006810 ... |
| 2 | Q8N653 | LZTR1 | 0.848 | anatomical structure development GO:0048856 cellular protein modification process GO:0006464 signal transduction GO:0007165 |
| 3 | Q9C029 | TRIM7 | 0.8155 | cellular protein modification process GO:0006464 |
| 4 | P55058 | PLTP | 0.8064 | biosynthetic process GO:0009058 reproduction GO:0000003 small molecule metabolic process GO:0044281 ... |
| 5 | Q96QD5 | DEPDC7 | 0.80506 | signal transduction GO:0007165 |
| 6 | P81605 | DCD | 0.78849 | biological process involved in symbiotic interaction GO:0044403 immune system process GO:0002376 response to stress GO:0006950 |
| 7 | O75503 | CLN5 | 0.78488 | anatomical structure development GO:0048856 catabolic process GO:0009056 cell differentiation GO:0030154 ... |
| 8 | O15212 | PFDN6 | 0.76822 | cellular component assembly GO:0022607 protein folding GO:0006457 protein-containing complex assembly GO:0065003 |
| 9 | P51854 | TKTL1 | 0.76339 | carbohydrate metabolic process GO:0005975 catabolic process GO:0009056 cellular nitrogen compound metabolic process GO:0034641 ... |
| 10 | Q9H0T7 | RAB17 | 0.72701 | anatomical structure development GO:0048856 cell differentiation GO:0030154 cell junction organization GO:0034330 ... |
20 40 60 80 100 AA: MRGSHRAAPALRPRGRLWPVLAVLAAAAAAGCAQAAMDECTDEGGRPQRCMPEFVNAAFNVTVVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQPHLQ STMI: SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD............................................................... DO_IUPRED2A: DDDDDDDDDD................................D......................................................... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................................................................. CONSENSUS: D.................................................................. CONSENSUS_MOBI: ...................................................................
120 140 160 180 200 AA: HGAAFLTDYNNQADTTWWQSQTMLAGVQYPSSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDE STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: ............................................................................................D....... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: QQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECMKNEF STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400 AA: DKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSSCHC STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
420 440 460 480 500 AA: SPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSIDECNIETGRCVCKDNVEGFNCERCKPGFFNLESSNPRGCTPCFCFGH STMI: DO_DISOPRED3: ...............................................D.................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
520 540 560 580 600 AA: SSVCTNAVGYSVYSISSTFQIDEDGWRAEQRDGSEASLEWSSERQDIAVISDSYFPRYFIAPAKFLGKQVLSYGQNLSFSFRVDRRDTRLSAEDLVLEGA STMI: DO_DISOPRED3: .........................................DD......................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
620 640 660 680 700 AA: GLRVSVPLIAQGNSYPSETTVKYVFRLHEATDYPWRPALTPFEFQKLLNNLTSIKIRGTYSERSAGYLDDVTLASARPGPGVPATWVESCTCPVGYGGQF STMI: DO_DISOPRED3: ........DD.DDDDDD................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
720 740 760 780 800 AA: CEMCLSGYRRETPNLGPYSPCVLCACNGHSETCDPETGVCNCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPCPGGSSCAVVPKTKEVVCTNCPTGTT STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
820 840 860 880 900 AA: GKRCELCDDGYFGDPLGRNGPVRLCRLCQCSDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSSCNP STMI: DO_DISOPRED3: .............................................................................................D...... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
920 940 960 980 1000 AA: VTGQCECLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNGQCDIRTGQCECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDDGR STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
1020 1040 1060 1080 1100 AA: CECREGFVGNRCDQCEENYFYNRSWPGCQECPACYRLVKDKVADHRVKLQELESLIANLGTGDEMVTDQAFEDRLKEAEREVMDLLREAQDVKDVDQNLM STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: ..................................................................DDDDDDDD...........DDD........DDD. DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
1120 1140 1160 1180 1200 AA: DRLQRVNNTLSSQISRLQNIRNTIEETGNLAEQARAHVENTERLIEIASRELEKAKVAAANVSVTQPESTGDPNNMTLLAEEARKLAERHKQEADDIVRV STMI: DO_DISOPRED3: ................................................................DDDDDDDDDDDD...................D.... DO_IUPRED2A: ..D.............DDD...D.DDDDDDDDDDDD....D................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.DDDDDDDDDDDD DO_SPOTD: .................................................................DDDDD.............................. CONSENSUS: ................................................................DDDDDDDDDDDD...................D.... CONSENSUS_MOBI: ....................................................................................................
1220 1240 1260 1280 1300 AA: AKTANDTSTEAYNLLLRTLAGENQTAFEIEELNRKYEQAKNISQDLEKQAARVHEEAKRAGDKAVEIYASVAQLSPLDSETLENEANNIKMEAENLEQLI STMI: DO_DISOPRED3: ...................DDD.DD.DDD....................................................................... DO_IUPRED2A: DDD........DDDDD..........DD.DDD.....DDDDDDDDDDDDDDDDDDDDD...................DDDDDDDDDDDDDDDDD...... DO_SPOTD: .................................................................................................... CONSENSUS: ..........................DD........................................................................ CONSENSUS_MOBI: ....................................................................................................
1320 1340 1360 1380 1400 AA: DQKLKDYEDLREDMRGKELEVKNLLEKGKTEQQTADQLLARADAAKALAEEAAKKGRDTLQEANDILNNLKDFDRRVNDNKTAAEEALRKIPAINQTITE STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: ......DD.DDDD....DDDDDDDDDDD.DDDDDDDDDDDDDDD.D..DDDDDDDDDDDDDDDDDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
1420 1440 1460 1480 1500 AA: ANEKTREAQQALGSAAADATEAKNKAHEAERIASAVQKNATSTKAEAERTFAEVTDLDNEVNNMLKQLQEAEKELKRKQDDADQDMMMAGMASQAAQEAE STMI: DO_DISOPRED3: ........................DDDDDDDDD.DD..DD..........................D...DDDDD.DD.......D........D..... DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: .................................................................................................... CONSENSUS: ........................DDDDDDDDDDDDDDDD..........................DDDDDDDDDDDD.......D........D..... CONSENSUS_MOBI: .................................................................................................... RICH_[A]: AheAeriAsAvqknA
1520 1540 1560 1580 1600 AA: INARKAKNSVTSLLSIINDLLEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIEEIMKDIRNLEDIRKTLPSGC STMI: DO_DISOPRED3: .................................DDDDDDDDDDD.DD........DD..DD.DDD.DD......................DDDDD..... DO_IUPRED2A: DDDDD................................DD...D.DDD.DD..DDDDDDDDDDDDDDDDDDDD...........................D DO_SPOTD: .................................................................................................... CONSENSUS: .....................................DDDDDDDDDD........DDDDDDDDDDDDD................................ CONSENSUS_MOBI: ...........................DDDDDDD..................................................................
AA: FNTPSIEKP STMI: DO_DISOPRED3: DDD...DDD DO_IUPRED2A: D.DDDDDDD DO_SPOTD: .......D. CONSENSUS: DDDDDDDDD CONSENSUS_MOBI: ....DDDDD