P11940 PABP1_HUMAN
Gene name: PABPC1
Protein name: Polyadenylate-binding protein 1
List of terms from Generic GO subset, which this protein is a part of:
- biological process involved in symbiotic interaction GO:0044403
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cellular nitrogen compound metabolic process GO:0034641
- mRNA processing GO:0006397
- nucleobase-containing compound catabolic process GO:0034655
- translation GO:0006412
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q8WZ71 | TMEM158 | 0.70669 | |
| 2 | Q8NBI6 | XXYLT1 | 0.68625 | biosynthetic process GO:0009058 cellular protein modification process GO:0006464 |
| 3 | Q9NR56 | MBNL1 | 0.67487 | anatomical structure development GO:0048856 cell differentiation GO:0030154 cellular nitrogen compound metabolic process GO:0034641 ... |
| 4 | Q9UKD1 | GMEB2 | 0.67072 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 |
| 5 | Q9H0Z9 | RBM38 | 0.66451 | anatomical structure development GO:0048856 biological process involved in symbiotic interaction GO:0044403 catabolic process GO:0009056 ... |
| 6 | Q7RTV5 | PRXL2C | 0.64551 | carbohydrate metabolic process GO:0005975 catabolic process GO:0009056 cellular nitrogen compound metabolic process GO:0034641 ... |
| 7 | Q53RT3 | ASPRV1 | 0.64398 | anatomical structure development GO:0048856 protein maturation GO:0051604 |
| 8 | Q9NQX7 | ITM2C | 0.63895 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell death GO:0008219 ... |
| 9 | Q5H8A4 | PIGG | 0.63645 | biosynthetic process GO:0009058 cellular protein modification process GO:0006464 |
| 10 | Q4LDE5 | SVEP1 | 0.63314 | anatomical structure development GO:0048856 cell adhesion GO:0007155 cell junction organization GO:0034330 ... |
20 40 60 80 100 AA: MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGN STMI: DO_DISOPRED3: DDDDDDDD............................................................................................ DO_IUPRED2A: .................................................................................................... DO_SPOTD: DDDDDDD............................................................................................. CONSENSUS: DDDDDDD............................................................................................. CONSENSUS_MOBI: DDDDDDDDD...........................................................................................
120 140 160 180 200 AA: IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGE STMI: DO_DISOPRED3: ..............................................................................DDDDDDDDD............. DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ...................................................................................DDDDDDDDDDDDDDDD.
220 240 260 280 300 AA: DMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN STMI: DO_DISOPRED3: ....................................................................DDDDDDDDDDDDDD.................. DO_IUPRED2A: ..............................................DDDDD......................DDDD....................... DO_SPOTD: .................................................................................................... CONSENSUS: .........................................................................DDDD....................... CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400 AA: LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPY STMI: DO_DISOPRED3: ...............................................................................DDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: .................................................DDDD................DD...DDDDDDDDDDD...D...DDDDDD.. DO_SPOTD: .................................................................................................... CONSENSUS: ...............................................................................DDDDDDDDDDDDDDDDDDD.. CONSENSUS_MOBI: .................................................................................................... RICH_[MV]: MqrMasVraVpnpV RICH_[NV]: VraVpNpViN
420 440 460 480 500 AA: QPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAA STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: .......DDDD..........DDDDDDD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: ..................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: .......DDDD..........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ................................................................DD.................................. RICH_[PY]: YYPPsqiaqlrPsP RICH_[AP]: AqgArPhPfqnmPgAirPAAPrPP PrPAAAAAA RICH_[AT]: TqrvAnTsTqTmgprpAAAA RICH_[AY]: AAAAAA RICH_[A]: AntstqtmgprpAAAAAA RICH_[P]: PhPfqnmPgairPaaPrPP RICH_[T]: TqrvanTsTqT RICH_[V]: VprVmstqrV RICH_fLPS_[A]: AAAAAA
520 540 560 580 600 AA: ATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESP STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.............................................. DO_IUPRED2A: DD.......DDDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.DDDDDD.........................D...DDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD......................................................... CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.............................................. CONSENSUS_MOBI: .................................................................................................... RICH_[QV]: QpQVtmQQpaVhVQgQ RICH_[QY]: QYkYaagvrnpQQhlnaQpQ RICH_[AP]: AtPAvrtvP RICH_[AY]: AtpAvrtvpqYkYAA RICH_[A]: AtpAvrtvpqykyAA RICH_[Q]: QykyaagvrnpQQhlnaQpQvtmQQpavhvQgQ RICH_[V]: VtmqqpaVhV RICH_[VY]: VrtVpqYkYaagV RICH_fLPS_[A]: AtpAvrtvpqykyAA RICH_fLPS_[Q]: QQhlnaQpQvtmQQpavhvQgQ
620 AA: ESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPTV STMI: DO_DISOPRED3: .................DDDDDDDDDDDDDDDDDDD DO_IUPRED2A: D......DDDD..DD..D...D.DDDDDDDDDDD.. DO_SPOTD: ....................DDDDDDDDDDDDDDDD CONSENSUS: .................DDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .................................... RICH_[A]: AkeAAqkAvnsA RICH_[V]: VnsatgVptV