Q13310 PABP4_HUMAN
Gene name: PABPC4
Protein name: Polyadenylate-binding protein 4
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cell differentiation GO:0030154
- cellular nitrogen compound metabolic process GO:0034641
- immune system process GO:0002376
- nucleobase-containing compound catabolic process GO:0034655
- response to stress GO:0006950
- translation GO:0006412
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q8IWL8 | STH | 0.82679 | cellular nitrogen compound metabolic process GO:0034641 mRNA processing GO:0006397 |
| 2 | Q9NY57 | STK32B | 0.7592 | cellular protein modification process GO:0006464 signal transduction GO:0007165 |
| 3 | P48549 | KCNJ3 | 0.71289 | cell-cell signaling GO:0007267 circulatory system process GO:0003013 transmembrane transport GO:0055085 ... |
| 4 | P0DMU3 | n/a | 0.66287 | |
| 5 | Q5XKR4 | OTP | 0.63644 | anatomical structure development GO:0048856 cell differentiation GO:0030154 cell population proliferation GO:0008283 |
| 6 | P31483 | TIA1 | 0.63432 | biosynthetic process GO:0009058 cell death GO:0008219 cellular nitrogen compound metabolic process GO:0034641 ... |
| 7 | P46937 | YAP1 | 0.63222 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell death GO:0008219 ... |
| 8 | Q99541 | PLIN2 | 0.62567 | transport GO:0006810 |
| 9 | Q9NYK6 | EURL | 0.62389 | anatomical structure development GO:0048856 cell differentiation GO:0030154 |
| 10 | Q9UGC6 | RGS17 | 0.62143 | signal transduction GO:0007165 |
20 40 60 80 100 AA: MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGN STMI: DO_DISOPRED3: DDDDDDDD............................................................................................ DO_IUPRED2A: .................................................................................................... DO_SPOTD: DDDDDDD............................................................................................. CONSENSUS: DDDDDDD............................................................................................. CONSENSUS_MOBI: ....................................................................................................
120 140 160 180 200 AA: VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGE STMI: DO_DISOPRED3: ..............................................................................DDDDDDDDDD............ DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: EVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN STMI: DO_DISOPRED3: ....................................................................DDDDDDDDDDDDD................... DO_IUPRED2A: ..............................................DDDD.................................................. DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400 AA: LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQ STMI: DO_DISOPRED3: ................................................................................DDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ..................................................DDD.....................DDDDDDD................... DO_SPOTD: ...........................................................................DDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: ...........................................................................DDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .................................................................................................... RICH_[AQ]: Q RICH_[A]: AgmrAlpAnAilnq RICH_[Q]: Q
420 440 460 480 500 AA: FQPAAGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVP STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: .........DDD.......DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDD....DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ...................................DDDDDDDDDDDDDDDDDDDDDDDD......................................... RICH_[PQ]: PavPQaQgrPPyytPnQlaQmrP RICH_[PY]: PaaggYfvPavPqaqgrPPYYtPnqlaqmrPnP RICH_[AG]: AptGsecpdrlAmdfGGAGAAqqG RICH_[QY]: QaQgrppYYtpnQlaQ RICH_[AP]: PAAggyfvPAvPqAqgrPP RICH_[AQ]: fQpAAggyfvpAvpQAQ RICH_[AV]: Vp RICH_[AY]: AAggYfvpAvpqAqgrppYY RICH_[A]: fqpAA AmdfggAgAA RICH_[G]: GGaGaaqqGltdscqsGG RICH_[Q]: fQpaaggyfvpavpQaQ QlaQmrpnprwQQggrpQgfQgmpsairQ QQgltdscQsggvp RICH_[GP]: PnPrwqqGGrPqGfqGmP RICH_[GQ]: QmrpnprwQQGGrpQGfQGmpsairQsG RICH_fLPS_[Q]: QlaQmrpnprwQQggrpQgfQ RICH_MOBI_[Q]: QQggrpQgfQgmpsairQ RICH_MOBI_[GQ]: QQGGrpQGfQGmpsairQsG
520 540 560 580 600 AA: TAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD........................................ DO_IUPRED2A: DD..DDDDDD.............DD.DD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.D...DDDDD......................... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD............................................... CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD........................................ CONSENSUS_MOBI: .................................................................................................... RICH_[PQ]: PhPaiQPlQaPQPavhvQgQeP RICH_[PY]: PravaPYkYassvrsPhP RICH_[AP]: AAPrAvAPykyAssvrsPhPA RICH_[AV]: tAVqnlAprAAVA RICH_[AY]: AprAAvAAAAprAvApYkYAssvrsphpA RICH_[A]: AvqnlAprAAvAAAAprAvApykyA RICH_[Q]: tavQ QplQapQpavhvQgQ RICH_[HQ]: HpaiQplQapQpavH RICH_fLPS_[A]: AvqnlAprAAvAAAAprAvA
620 640 AA: ELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS STMI: DO_DISOPRED3: ...........................DDDDDDDDDDDDDDDDD DO_IUPRED2A: ....DDDDD.......DDD...DDD.D.....DDDDD.D..... DO_SPOTD: .............................DDDDDDDDDDDDDDD CONSENSUS: .............................DDDDDDDDDDDDDDD CONSENSUS_MOBI: ............................................ RICH_[A]: AAqkvgAvAAA