Q13838 DX39B_HUMAN
Gene name: DDX39B
Protein name: Spliceosome RNA helicase DDX39B
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biological process involved in symbiotic interaction GO:0044403
- biosynthetic process GO:0009058
- cell cycle GO:0007049
- cell differentiation GO:0030154
- cell population proliferation GO:0008283
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- DNA metabolic process GO:0006259
- growth GO:0040007
- mRNA processing GO:0006397
- nucleocytoplasmic transport GO:0006913
- protein transport GO:0015031
- protein-containing complex assembly GO:0065003
- response to stress GO:0006950
- ribonucleoprotein complex assembly GO:0022618
- translation GO:0006412
- transport GO:0006810
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q15544 | TAF11 | 0.72041 | biological process involved in symbiotic interaction GO:0044403 biosynthetic process GO:0009058 cellular component assembly GO:0022607 ... |
| 2 | Q9BXV9 | GON7 | 0.71974 | |
| 3 | O60678 | PRMT3 | 0.71389 | cellular protein modification process GO:0006464 |
| 4 | O14787 | TNPO2 | 0.71251 | nucleocytoplasmic transport GO:0006913 protein transport GO:0015031 transport GO:0006810 |
| 5 | Q96ET8 | TVP23C | 0.71006 | protein transport GO:0015031 transport GO:0006810 vesicle-mediated transport GO:0016192 |
| 6 | O60337 | MARCHF6 | 0.70026 | catabolic process GO:0009056 cellular protein modification process GO:0006464 response to stress GO:0006950 |
| 7 | Q8IY51 | TIGD4 | 0.6992 | |
| 8 | O14958 | CASQ2 | 0.69618 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 cell differentiation GO:0030154 ... |
| 9 | Q8NCS7 | SLC44A5 | 0.68936 | biosynthetic process GO:0009058 transmembrane transport GO:0055085 transport GO:0006810 |
| 10 | Q9NYZ1 | TVP23B | 0.68758 | protein transport GO:0015031 transport GO:0006810 vesicle-mediated transport GO:0016192 |
20 40 60 80 100 AA: MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFV STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................................................................. DO_IUPRED2A: .....DD.DDDDDDDDDDDDDDDDDDDDD....................................................................... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................................................................. CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................................................................. CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..DDDDDDDDDDD........................................................ RICH_[AD]: DyeDDevetAAggDgAeApA RICH_[AE]: EddEvEtAAggdgAEApA RICH_[AG]: AAGGdGAeApA RICH_[A]: AAggdgAeApA RICH_[D]: DvDnellDyeDDevetaaggD RICH_[DE]: EnDvDnEllDyEDDEvEtaaggDgaE RICH_fLPS_[D]: aenDvDnellDyeDD RICH_MOBI_[AD]: DyeDDevetAAggDgAeApA RICH_MOBI_[AE]: EddEvEtAAggdgAEApA RICH_MOBI_[AG]: AAGGdGAeApA RICH_MOBI_[A]: AAggdgAeApA RICH_MOBI_[D]: DvDnellDyeDDevetaaggD RICH_MOBI_[DE]: EnDvDnEllDyEDDEvEtaaggDgaE RICH_fLPS_MOBI_[D]: aenDvDnellDyeDD
120 140 160 180 200 AA: LATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDK STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: MLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400 AA: IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
420 AA: NDVQDRFEVNISELPDEIDISSYIEQTR STMI: DO_DISOPRED3: ..........................DD DO_IUPRED2A: ............................ DO_SPOTD: ........................DDDD CONSENSUS: ..........................DD CONSENSUS_MOBI: ............................