Q92889 XPF_HUMAN
Gene name: ERCC4
Protein name: DNA repair endonuclease XPF
List of terms from Generic GO subset, which this protein is a part of:
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cell cycle GO:0007049
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- chromosome organization GO:0051276
- chromosome segregation GO:0007059
- DNA metabolic process GO:0006259
- homeostatic process GO:0042592
- protein-containing complex assembly GO:0065003
- reproduction GO:0000003
- response to stress GO:0006950
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q96GQ7 | DDX27 | 0.78708 | cellular nitrogen compound metabolic process GO:0034641 ribosome biogenesis GO:0042254 |
| 2 | Q6ZQQ6 | WDR87 | 0.77913 | |
| 3 | Q9UIG0 | BAZ1B | 0.77024 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 cellular protein modification process GO:0006464 ... |
| 4 | Q96T23 | RSF1 | 0.76501 | biological process involved in symbiotic interaction GO:0044403 biosynthetic process GO:0009058 cellular component assembly GO:0022607 ... |
| 5 | Q9BVP2 | GNL3 | 0.76466 | biosynthetic process GO:0009058 cell division GO:0051301 cell population proliferation GO:0008283 ... |
| 6 | Q16533 | SNAPC1 | 0.76212 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 |
| 7 | Q9NPD8 | UBE2T | 0.75611 | cellular nitrogen compound metabolic process GO:0034641 cellular protein modification process GO:0006464 DNA metabolic process GO:0006259 ... |
| 8 | Q13206 | DDX10 | 0.75531 | anatomical structure development GO:0048856 cellular nitrogen compound metabolic process GO:0034641 ribosome biogenesis GO:0042254 |
| 9 | Q13451 | FKBP5 | 0.75471 | cellular protein modification process GO:0006464 protein folding GO:0006457 |
| 10 | Q8NFC6 | BOD1L1 | 0.75201 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 cellular protein modification process GO:0006464 ... |
20 40 60 80 100 AA: MESGQPARRIAMAPLLEYERQLVLELLDTDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYFINQLKIEGVEHLPRRVTNEITSNSRYEV STMI: DO_DISOPRED3: DDDDDDDDD........................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: DDDDDDDDD........................................................................................... CONSENSUS: DDDDDDDDD........................................................................................... CONSENSUS_MOBI: ....................................................................................................
120 140 160 180 200 AA: YTQGGVIFATSRILVVDFLTDRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYLWPRFHVAV STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: NSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQ STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400 AA: YDCVTFLNLLESLRATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDAKMSKKEKISEKMEIKEGEETKKELVLESNPKWEALTEVLKEIEAENKESEA STMI: DO_DISOPRED3: .................................................DDDDDDDDDDDDDDDDDDD................................ DO_IUPRED2A: ........................................................DDDDDDD.....DD........................DD.... DO_SPOTD: ................................................DDDDDDDDDDDDDDDDDDDDDDD............................. CONSENSUS: .................................................DDDDDDDDDDDDDDDDDDDDD.............................. CONSENSUS_MOBI: .................................................................................................... RICH_[E]: EkisEkmEikEgEE RICH_[K]: KmsKKeKiseKmeiKegeetK RICH_[EI]: EkIsEkmEIkEgEE RICH_[EK]: KmsKKEKisEKmEiKEgEEtK RICH_[IK]: KmsKKeKIseKmeIK RICH_[KM]: KMsKKeKiseKMeiK RICH_fLPS_[E]: EkmEikEgEE RICH_fLPS_[KE]: KmsKKEKisEKmEiKEgEEtK RICH_fLPS_[K]: KmsKKeKiseKmeiKegeetK
420 440 460 480 500 AA: LGGPGQVLICASDDRTCSQLRDYITLGAEAFLLRLYRKTFEKDSKAEEVWMKFRKEDSSKRIRKSHKRPKDPQNKERASTKERTLKKKKRKLTLTQMVGK STMI: DO_DISOPRED3: .................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ...D..............................................D.........DDDDDDDDDDDDDDDDDDDDDDDDDD.....DD..DDDDD DO_SPOTD: ......................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: ..................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ...........................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDD............. RICH_[K]: KfrKedssKrirKshKrpKdpqnKerastKertlKKKKrKltltqmvgK RICH_[R]: RkedsskRiRkshkR RICH_[T]: TkerTlkkkkrklTlT RICH_[EK]: KKKrKltltqmvgK RICH_[KL]: LKKKKrKLtLtqmvgK RICH_[KR]: KfRKedssKRiRKshKRpK RICH_[KT]: TKerTlKKKKrKlTlT RICH_MOBI_[K]: KrirKshKrpKdpqnKerastKertlKK RICH_MOBI_[R]: RiRkshkRpkdpqnkeR RICH_MOBI_[KR]: KRiRKshKRpKdpqnKeR
520 540 560 580 600 AA: PEELEEEGDVEEGYRREISSSPESCPEEIKHEEFDVNLSSDAAFGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPG STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...................................................... DO_IUPRED2A: DDDDDDDDDDDDDDDDDDD.DDD.D.D.DDD..................................................................... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD......................................................... CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD......................................................... CONSENSUS_MOBI: .DDDDDDDDDDDDDDDDDDDDDDDDD.......................................................................... RICH_[E]: EElEEEgdvEEgyrrEissspEscpEEikhEE RICH_[EK]: pEElEEE RICH_[ES]: SSSpEScpEE RICH_[KL]: peeL RICH_MOBI_[E]: EElEEEgdvEEgyrrEissspE
620 640 660 680 700 AA: KPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLVRGTASADVSTDTRKAGGQEQNGTQQSIVVDMREFRSELPSLIH STMI: DO_DISOPRED3: .....................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...................... DO_IUPRED2A: ........................................DDDDDD..DDDDDDDDDDDDD...DDDDDDDDDDDDDDDD..DD................ DO_SPOTD: ....................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..................... CONSENSUS: .....................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..................... CONSENSUS_MOBI: ...........................................................DDDDDDDDDDDDDDDDDDDD..................... RICH_[D]: DetnlDlvrgtasaDvstD RICH_[T]: TnldlvrgTasadvsTdT RICH_[DT]: DeTnlDlvrgTasaDvsTDT
720 740 760 780 800 AA: RRGIDIEPVTLEVGDYILTPEMCVERKSISDLIGSLNNGRLYSQCISMSRYYKRPVLLIEFDPSKPFSLTSRGALFQEISSNDISSKLTLLTLHFPRLRI STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
820 840 860 880 900 AA: LWCPSPHATAELFEELKQSKPQPDAATALAITADSETLPESEKYNPGPQDFLLKMPGVNAKNCRSLMHHVKNIAELAALSQDELTSILGNAANAKQLYDF STMI: DO_DISOPRED3: ........................DDDDDDDDDDDDDDDDDDD......................................................... DO_IUPRED2A: ............DDDDD......D..D.DDDD......DDDD.D.D..D................................................... DO_SPOTD: .................................................................................................... CONSENSUS: ..........................DDDDDD......DDDD.......................................................... CONSENSUS_MOBI: ....................................................................................................
AA: IHTSFAEVVSKGKGKK STMI: DO_DISOPRED3: ......DDDDDDDDDD DO_IUPRED2A: ...............D DO_SPOTD: ........DDDDDDDD CONSENSUS: ........DDDDDDDD CONSENSUS_MOBI: ................