Q92889 XPF_HUMAN
Gene name: ERCC4
Protein name: DNA repair endonuclease XPF
List of terms from Generic GO subset, which this protein is a part of:
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cell cycle GO:0007049
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- chromosome organization GO:0051276
- chromosome segregation GO:0007059
- DNA metabolic process GO:0006259
- homeostatic process GO:0042592
- protein-containing complex assembly GO:0065003
- reproduction GO:0000003
- response to stress GO:0006950
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
# | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
---|---|---|---|---|
1 | Q96GQ7 | DDX27 | 0.78708 |
cellular nitrogen compound metabolic process
GO:0034641 ribosome biogenesis GO:0042254 |
2 | Q6ZQQ6 | WDR87 | 0.77913 | |
3 | Q9UIG0 | BAZ1B | 0.77024 |
biosynthetic process
GO:0009058 cellular nitrogen compound metabolic process GO:0034641 cellular protein modification process GO:0006464 ... |
4 | Q96T23 | RSF1 | 0.76501 |
biological process involved in symbiotic interaction
GO:0044403 biosynthetic process GO:0009058 cellular component assembly GO:0022607 ... |
5 | Q9BVP2 | GNL3 | 0.76466 |
biosynthetic process
GO:0009058 cell division GO:0051301 cell population proliferation GO:0008283 ... |
6 | Q16533 | SNAPC1 | 0.76212 |
biosynthetic process
GO:0009058 cellular nitrogen compound metabolic process GO:0034641 |
7 | Q9NPD8 | UBE2T | 0.75611 |
cellular nitrogen compound metabolic process
GO:0034641 cellular protein modification process GO:0006464 DNA metabolic process GO:0006259 ... |
8 | Q13206 | DDX10 | 0.75531 |
anatomical structure development
GO:0048856 cellular nitrogen compound metabolic process GO:0034641 ribosome biogenesis GO:0042254 |
9 | Q13451 | FKBP5 | 0.75471 |
cellular protein modification process
GO:0006464 protein folding GO:0006457 |
10 | Q8NFC6 | BOD1L1 | 0.75201 |
biosynthetic process
GO:0009058 cellular nitrogen compound metabolic process GO:0034641 cellular protein modification process GO:0006464 ... |
20 40 60 80 100
AA: MESGQPARRIAMAPLLEYERQLVLELLDTDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYFINQLKIEGVEHLPRRVTNEITSNSRYEV
STMI:
DO_DISOPRED3: DDDDDDDDD...........................................................................................
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: DDDDDDDDD...........................................................................................
CONSENSUS: DDDDDDDDD...........................................................................................
CONSENSUS_MOBI: ....................................................................................................
120 140 160 180 200
AA: YTQGGVIFATSRILVVDFLTDRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYLWPRFHVAV
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300
AA: NSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQ
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400
AA: YDCVTFLNLLESLRATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDAKMSKKEKISEKMEIKEGEETKKELVLESNPKWEALTEVLKEIEAENKESEA
STMI:
DO_DISOPRED3: .................................................DDDDDDDDDDDDDDDDDDD................................
DO_IUPRED2A: ........................................................DDDDDDD.....DD........................DD....
DO_SPOTD: ................................................DDDDDDDDDDDDDDDDDDDDDDD.............................
CONSENSUS: .................................................DDDDDDDDDDDDDDDDDDDDD..............................
CONSENSUS_MOBI: ....................................................................................................
RICH_[E]: EkisEkmEikEgEE
RICH_[K]: KmsKKeKiseKmeiKegeetK
RICH_[EI]: EkIsEkmEIkEgEE
RICH_[EK]: KmsKKEKisEKmEiKEgEEtK
RICH_[IK]: KmsKKeKIseKmeIK
RICH_[KM]: KMsKKeKiseKMeiK
RICH_fLPS_[E]: EkmEikEgEE
RICH_fLPS_[KE]: KmsKKEKisEKmEiKEgEEtK
RICH_fLPS_[K]: KmsKKeKiseKmeiKegeetK
420 440 460 480 500
AA: LGGPGQVLICASDDRTCSQLRDYITLGAEAFLLRLYRKTFEKDSKAEEVWMKFRKEDSSKRIRKSHKRPKDPQNKERASTKERTLKKKKRKLTLTQMVGK
STMI:
DO_DISOPRED3: .................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: ...D..............................................D.........DDDDDDDDDDDDDDDDDDDDDDDDDD.....DD..DDDDD
DO_SPOTD: ......................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: ..................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ...........................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDD.............
RICH_[K]: KfrKedssKrirKshKrpKdpqnKerastKertlKKKKrKltltqmvgK
RICH_[R]: RkedsskRiRkshkR
RICH_[T]: TkerTlkkkkrklTlT
RICH_[EK]: KKKrKltltqmvgK
RICH_[KL]: LKKKKrKLtLtqmvgK
RICH_[KR]: KfRKedssKRiRKshKRpK
RICH_[KT]: TKerTlKKKKrKlTlT
RICH_MOBI_[K]: KrirKshKrpKdpqnKerastKertlKK
RICH_MOBI_[R]: RiRkshkRpkdpqnkeR
RICH_MOBI_[KR]: KRiRKshKRpKdpqnKeR
520 540 560 580 600
AA: PEELEEEGDVEEGYRREISSSPESCPEEIKHEEFDVNLSSDAAFGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPG
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD......................................................
DO_IUPRED2A: DDDDDDDDDDDDDDDDDDD.DDD.D.D.DDD.....................................................................
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.........................................................
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.........................................................
CONSENSUS_MOBI: .DDDDDDDDDDDDDDDDDDDDDDDDD..........................................................................
RICH_[E]: EElEEEgdvEEgyrrEissspEscpEEikhEE
RICH_[EK]: pEElEEE
RICH_[ES]: SSSpEScpEE
RICH_[KL]: peeL
RICH_MOBI_[E]: EElEEEgdvEEgyrrEissspE
620 640 660 680 700
AA: KPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLVRGTASADVSTDTRKAGGQEQNGTQQSIVVDMREFRSELPSLIH
STMI:
DO_DISOPRED3: .....................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD......................
DO_IUPRED2A: ........................................DDDDDD..DDDDDDDDDDDDD...DDDDDDDDDDDDDDDD..DD................
DO_SPOTD: ....................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.....................
CONSENSUS: .....................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.....................
CONSENSUS_MOBI: ...........................................................DDDDDDDDDDDDDDDDDDDD.....................
RICH_[D]: DetnlDlvrgtasaDvstD
RICH_[T]: TnldlvrgTasadvsTdT
RICH_[DT]: DeTnlDlvrgTasaDvsTDT
720 740 760 780 800
AA: RRGIDIEPVTLEVGDYILTPEMCVERKSISDLIGSLNNGRLYSQCISMSRYYKRPVLLIEFDPSKPFSLTSRGALFQEISSNDISSKLTLLTLHFPRLRI
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
820 840 860 880 900
AA: LWCPSPHATAELFEELKQSKPQPDAATALAITADSETLPESEKYNPGPQDFLLKMPGVNAKNCRSLMHHVKNIAELAALSQDELTSILGNAANAKQLYDF
STMI:
DO_DISOPRED3: ........................DDDDDDDDDDDDDDDDDDD.........................................................
DO_IUPRED2A: ............DDDDD......D..D.DDDD......DDDD.D.D..D...................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ..........................DDDDDD......DDDD..........................................................
CONSENSUS_MOBI: ....................................................................................................
AA: IHTSFAEVVSKGKGKK
STMI:
DO_DISOPRED3: ......DDDDDDDDDD
DO_IUPRED2A: ...............D
DO_SPOTD: ........DDDDDDDD
CONSENSUS: ........DDDDDDDD
CONSENSUS_MOBI: ................