Structural similarities of EDD domain Families.
Structural similarities of EDD domain-containing families and tubulin GTPase domain.
Structural models produced with MOLSCRIPT reveal similarities between (A)
Dak representative structure (1un9) with N-terminal EDD domain, (B) EIIA-man
structure (1pdo) of EDD domain swapped dimer, and (C) DegV representative
structure (1pzx) with N-terminal EDD domain in
comparison to (D) tubulin GTPase domain representative structure (1tub).
The α-helices and β-strands of the EDD domain homologs and the N-terminal tubulin domain
are colored blue and yellow, respectively. The α-helices and β-strands of the equivalent
C-terminal domains are colored purple and green, respectively. Elements inserted into
the EDD domain core fold are colored white while elements inserted into the C-terminal
domain (or elements corresponding to the EIIA-man swapped dimer that replace the
C-terminal domain) are colored gray. Bonds representations of bound ligands
(Dihydroxyacetone in Dak and Palmitate in DegV) and family-conserved residues
marking the active sites are colored according to atom type (gray for carbon,
red for oxygen, blue for nitrogen, and pink for phosphate). The N-terminus and
the C-terminus of each structure is labeled.