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Results Summary:
The query matrix is available at here. The target database is scop40.
This query finds 158 pdb hits containing 167 motifs (shown as below) spanning over 21 SCOP folds and 32 SCOP superfamilies
The ranking list of motif hits is shown as below. The information of each motif is formatted as:
1. 1wj4 KIAA0794 protein 0.1065190 d1wj4a_ Hypothetical protein KIAA0794 Ubiquitin-like beta-Grasp (ubiquitin-like) A:43-51,53-61,65-77,82-88,110-119 2. 1wmh Protein kinase C, iota type 0.0951022 d1wmha_ Protein kinase C, iota type CAD & PB1 domains beta-Grasp (ubiquitin-like) A:16-24,25-33,37-50,57-64,91-98 3. 2npt Dual specificity mitogen-activated protein ki 0.0950661 d2npta1 Mitogen activated protein kinase kinase 5, Map2k5 CAD & PB1 domains beta-Grasp (ubiquitin-like) A:17-24,26-33,40-53,58-65,101-108 4. 1gg3 ERYTHROID MEMBRANE PROTEIN 4.1R 0.0826241 d1gg3a3 Erythroid membrane protein 4.1R Ubiquitin-like beta-Grasp (ubiquitin-like) A:1-8,10-17,24-36,44-50,71-77 5. 1ip9 BEM1 PROTEIN 0.0821625 d1ip9a_ Bud emergence mediator Bemp1 CAD & PB1 domains beta-Grasp (ubiquitin-like) A:12-20,21-29,33-46,49-56,78-85 6. 1h8c FAS-ASSOCIATED FACTOR 1 0.0817261 d1h8ca_ Fas-associated factor 1, Faf1 Ubiquitin-like beta-Grasp (ubiquitin-like) A:4-13,15-24,27-39,45-51,72-80 7. 2c60 HUMAN MITOGEN-ACTIVATED PROTEIN KINASE KINASE 0.0811359 d2c60a1 Mitogen-activated protein kinase kinase kinase 3, MEKK 3 CAD & PB1 domains beta-Grasp (ubiquitin-like) A:44-52,53-61,65-78,81-88,115-122 8. 1v6e cytoskeleton-associated protein 1 0.0785238 d1v6ea_ Ubiquitin-like domain of tubulin folding cofactor B Ubiquitin-like beta-Grasp (ubiquitin-like) A:7-14,20-26,30-43,48-56,78-87 9. 1t0y tubulin folding cofactor B 0.0778028 d1t0ya_ Ubiquitin-like domain of tubulin folding cofactor B Ubiquitin-like beta-Grasp (ubiquitin-like) A:3-12,17-24,27-40,45-53,74-84 10. 1wmh Partitioning defective-6 homolog alpha 0.0773515 d1wmhb_ Partitioning defective-6 homolog alpha, PAR-6 alpha CAD & PB1 domains beta-Grasp (ubiquitin-like) B:14-23,24-33,38-51,57-64,87-94 11. 1h4r MERLIN 0.0769704 d1h4ra3 Merlin Ubiquitin-like beta-Grasp (ubiquitin-like) A:20-29,30-39,42-55,61-69,91-99 12. 1lfd RALGDS 0.0751597 d1lfda_ Ral guanosine-nucleotide exchange factor, RalGDS Ubiquitin-like beta-Grasp (ubiquitin-like) A:15-24,31-38,41-54,63-69,93-99 13. 1zkh Splicing factor 3 subunit 1 0.0745212 d1zkha1 Splicing factor 3 subunit 1, C-terminal domain Ubiquitin-like beta-Grasp (ubiquitin-like) A:1-10,20-29,33-46,51-57,74-83 14. 1c1y PROTO-ONKOGENE SERINE/THREONINE PROTEIN KINAS 0.0738934 d1c1yb_ c-Raf1 RBD Ubiquitin-like beta-Grasp (ubiquitin-like) B:56-63,65-72,77-90,96-103,124-130 15. 1ttn dendritic cell-derived ubiquitin-like protein 0.0730087 d1ttna1 Dendritic cell-derived ubiquitin-like protein Ubiquitin-like beta-Grasp (ubiquitin-like) A:23-31,33-41,45-58,64-69,89-94 16. 1q27 Putative Nudix hydrolase DR0079 0.0726903 d1q27a_ Hypothetical protein DR0079 Nudix Nudix A:34-44,67-71,77-91,98-106,114-123 17. 1xdy Bacterial Sulfite Oxidase 0.0725847 d1xdya_ Bacterial sulfite oxidase YedY Oxidoreductase molybdopterin-binding domain Oxidoreductase molybdopterin-binding domain A:68-74,79-84,116-125,131-138,208-216 18. 1l7y HYPOTHETICAL PROTEIN ZK652.3 0.0723275 d1l7ya_ Hypothetical protein zk652.3 Ubiquitin-like beta-Grasp (ubiquitin-like) A:13-20,26-34,38-51,56-62,82-89 19. 1mg8 Parkin 0.0717566 d1mg8a_ Ubiquitin-like domain of parkin Ubiquitin-like beta-Grasp (ubiquitin-like) A:2-10,13-20,24-37,42-48,66-74 20. 1wgr Growth factor receptor-bound protein 7 0.0715717 d1wgra_ Growth factor receptor-bound protein 7, GRB-7 Ubiquitin-like beta-Grasp (ubiquitin-like) A:9-17,19-27,31-41,51-59,84-91 21. 2cr5 Reproduction 8 0.0710076 d2cr5a1 UBX domain-containing protein 6 (Reproduction 8) Ubiquitin-like beta-Grasp (ubiquitin-like) A:22-31,33-42,45-57,62-68,89-98 22. 1acc ANTHRAX PROTECTIVE ANTIGEN 0.0701557 d1acca_ Anthrax protective antigen Anthrax protective antigen Anthrax protective antigen A:488-495,498-506,522-532,549-555,587-594 23. 1c9f CASPASE-ACTIVATED DNASE 0.0698178 d1c9fa_ Caspase-activated DNase (CAD), DFF40, N-terminal domain CAD & PB1 domains beta-Grasp (ubiquitin-like) A:8-15,20-27,28-41,46-53,68-77 24. 1vjk molybdopterin converting factor, subunit 1 0.0697010 d1vjka_ Molybdopterin synthase subunit MoaD MoaD/ThiS beta-Grasp (ubiquitin-like) A:1-9,19-26,30-43,59-65,78-85 25. 1wgy Rap guanine nucleotide exchange factor 5 0.0694203 d1wgya_ Rap guanine nucleotide exchange factor 5, RapGEF5 Ubiquitin-like beta-Grasp (ubiquitin-like) A:10-17,19-26,31-44,49-57,79-86 26. 2faz Ubiquitin-like containing PHD and RING finger 0.0692953 d2faza1 Ubiquitin-like PHD and RING finger domain-containing protein 1 Ubiquitin-like beta-Grasp (ubiquitin-like) A:1-8,12-18,24-37,42-48,65-74 27. 2igd PROTEIN G 0.0680180 d2igda_ Immunoglobulin-binding protein G, different constituent domains Immunoglobulin-binding domains beta-Grasp (ubiquitin-like) A:5-15,16-26,27-43,47-53,54-61 28. 1v8c MoaD related protein 0.0679348 d1v8ca1 MoaD-related protein, N-terminal domain MoaD/ThiS beta-Grasp (ubiquitin-like) A:1-6,16-20,24-37,52-58,76-83 29. 1mg4 DOUBLECORTIN-LIKE KINASE (N-TERMINAL DOMAIN) 0.0676361 d1mg4a_ Doublecortin-like kinase Dclk Doublecortin (DC) beta-Grasp (ubiquitin-like) A:56-64,71-77,83-96,106-111,125-133 30. 1v5o 1700011N24Rik protein 0.0673310 d1v5oa_ 1700011n24rik protein Ubiquitin-like beta-Grasp (ubiquitin-like) A:7-18,19-29,33-46,51-57,75-84 31. 2bkf ZINC-FINGER PROTEIN NBR1 (NEXT TO BREAST CANC 0.0667780 d2bkfa1 Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) CAD & PB1 domains beta-Grasp (ubiquitin-like) A:3-12,13-22,27-40,43-51,76-85 32. 1vkb hypothetical protein 0.0663350 d1vkba_ Hypothetical protein LOC223267 BtrG-like BtrG-like A:1-7,59-71,72-83,88-96,108-118 33. 1wm3 Ubiquitin-like protein SMT3B 0.0663262 d1wm3a_ SUMO-2 Ubiquitin-like beta-Grasp (ubiquitin-like) A:17-25,27-35,39-52,58-63,80-88 34. 2a9d Sulfite Oxidase 0.0662427 d2a9da2 Sulfite oxidase, middle catalytic domain Oxidoreductase molybdopterin-binding domain Oxidoreductase molybdopterin-binding domain A:152-156,162-166,218-227,236-243,302-310 35. 1z2m interferon, alpha-inducible protein (clone IF 0.0656383 d1z2ma2 Interferon-induced 15 kDa protein Ubiquitin-like beta-Grasp (ubiquitin-like) A:81-89,91-99,103-116,121-127,144-153 36. 1wju NEDD8 ultimate buster-1 0.0655437 d1wjua_ NEDD8 ultimate buster-1, NUB1 Ubiquitin-like beta-Grasp (ubiquitin-like) A:15-22,31-37,41-54,59-65,82-91 37. 1z2m interferon, alpha-inducible protein (clone IF 0.0655437 d1z2ma1 Interferon-induced 15 kDa protein Ubiquitin-like beta-Grasp (ubiquitin-like) A:3-9,13-19,24-37,42-49,67-76 38. 1twf DNA-directed RNA polymerase II 140 kDa polype 0.0655308 d1twfb_ RBP2 beta and beta-prime subunits of DNA dependent RNA-polymerase beta and beta-prime subunits of DNA dependent RNA-polymerase B:577-583,584-591,592-607,613-620,621-628 39. 1et9 SUPERANTIGEN SPE-H 0.0649308 d1et9a2 Streptococcal superantigen Spe-H Superantigen toxins, C-terminal domain beta-Grasp (ubiquitin-like) A:97-109,110-122,126-143,154-162,196-204 40. 1x1m Ubiquitin-like protein SB132 0.0647878 d1x1ma1 Ubiquitin-like protein 7 Ubiquitin-like beta-Grasp (ubiquitin-like) A:13-20,27-32,46-59,67-73,90-99 41. 1wxv BAG-family molecular chaperone regulator-1 0.0638529 d1wxva1 Bag-family molecular chaperone regulator-1 Ubiquitin-like beta-Grasp (ubiquitin-like) A:7-15,16-24,33-46,52-57,76-83 42. 1jal YchF protein 0.0627274 d1jala2 YchF GTP-binding protein, C-terminal domain TGS-like beta-Grasp (ubiquitin-like) A:279-287,288-296,300-310,316-323,353-361 43. 2fug NADH-quinone oxidoreductase chain 3 0.0626370 d2fug33 Nadh-quinone oxidoreductase chain 3, Nqo3, N-terminal domain 2Fe-2S ferredoxin-like beta-Grasp (ubiquitin-like) 3:1-7,8-14,18-27,48-54,89-95 44. 2ghf Zinc fingers and homeoboxes protein 1 0.0626017 d2ghfa1 Zinc fingers and homeoboxes protein 1, ZHX1 C2H2 and C2HC zinc fingers C2H2 and C2HC zinc fingers A:50-55,56-60,62-75,79-88,89-98 45. 1wxq GTP-binding protein 0.0623403 d1wxqa2 GTP-binding protein PH0525 TGS-like beta-Grasp (ubiquitin-like) A:320-325,341-345,350-360,366-372,386-394 46. 1wgd Homocysteine-responsive endoplasmic reticulum 0.0618774 d1wgda_ Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, HERPUD1 Ubiquitin-like beta-Grasp (ubiquitin-like) A:7-13,21-27,31-44,51-57,77-85 47. 1wx8 RIKEN cDNA 4931431F19 0.0615953 d1wx8a1 4931431F19Rik Ubiquitin-like beta-Grasp (ubiquitin-like) A:16-25,26-35,38-51,56-62,79-88 48. 1wxa Afadin 0.0614628 d1wxaa1 Afadin Ubiquitin-like beta-Grasp (ubiquitin-like) A:9-16,25-31,35-48,57-65,98-107 49. 1lm8 ELONGIN B 0.0614515 d1lm8b_ Elongin B Ubiquitin-like beta-Grasp (ubiquitin-like) B:1-10,11-20,23-36,41-47,72-80 50. 2z0d Microtubule-associated proteins 1A/1B light c 0.0613234 d2z0db1 Microtubule-associated proteins 1A/1B light chain 3B Ubiquitin-like beta-Grasp (ubiquitin-like) B:29-38,50-56,59-72,79-84,107-115 51. 1f2r INHIBITOR OF CASPASE-ACTIVATED DNASE 0.0609088 d1f2ri_ Inhibitor of caspase-activated DNase (ICAD), DFF45, N-terminal domain CAD & PB1 domains beta-Grasp (ubiquitin-like) I:18-25,31-37,38-51,59-65,81-89 52. 1se9 ubiquitin family 0.0606244 d1se9a_ Hypothetical protein At3g01050 Ubiquitin-like beta-Grasp (ubiquitin-like) A:7-15,17-26,30-43,56-61,84-92 53. 1enf ENTEROTOXIN H 0.0601974 d1enfa2 Staphylococcal enterotoxin H, SEH Superantigen toxins, C-terminal domain beta-Grasp (ubiquitin-like) A:107-117,118-129,134-151,160-169,203-213 54. 1xlq Putidaredoxin 0.0600060 d1xlqa1 2Fe-2S ferredoxin 2Fe-2S ferredoxin-like beta-Grasp (ubiquitin-like) A:1-8,10-17,22-31,48-53,95-102 55. 1wx9 HLA-B associated transcript-3 isoform b 0.0598982 d1wx9a1 Large proline-rich protein BAT3 Ubiquitin-like beta-Grasp (ubiquitin-like) A:8-15,17-24,29-42,47-53,70-78 56. 1v30 Hypothetical UPF0131 protein PH0828 0.0597657 d1v30a_ Hypothetical protein PH0828 BtrG-like BtrG-like A:8-13,55-64,65-75,80-89,90-99 57. 2bwf UBIQUITIN-LIKE PROTEIN DSK2 0.0597514 d2bwfa1 DSK2 Ubiquitin-like beta-Grasp (ubiquitin-like) A:2-10,11-19,23-36,41-47,64-73 58. 2fb1 conserved hypothetical protein 0.0595628 d2fb1a2 Hypothetical protein BT0354, N-terminal domain Nudix Nudix A:12-24,46-50,55-69,74-82,92-101 59. 2c5l PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C PLC 0.0593542 d2c5lc1 Phospholipase C-epsilon-1 Ubiquitin-like beta-Grasp (ubiquitin-like) C:2135-2143,2149-2157,2160-2173,2186-2195,2227-2236 60. 2cs4 Protein C12orf2 0.0593225 d2cs4a1 Ras association domain-containing protein 8 Ubiquitin-like beta-Grasp (ubiquitin-like) A:8-15,16-23,29-42,46-54,80-87 61. 1gnu GABARAP 0.0592839 d1gnua_ GABA(A) receptor associated protein GABARAP Ubiquitin-like beta-Grasp (ubiquitin-like) A:27-36,47-53,56-69,76-81,103-111 62. 1tke Threonyl-tRNA synthetase 0.0592347 d1tkea1 Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain TGS-like beta-Grasp (ubiquitin-like) A:1-7,9-15,19-28,36-41,53-61 63. 2inc TouB protein 0.0591331 d2incc1 Toluene, o-xylene monooxygenase oxygenase subunit TouB TmoB-like beta-Grasp (ubiquitin-like) C:3-11,16-22,26-39,49-57,76-85 64. 1oey NEUTROPHIL CYTOSOL FACTOR 2 0.0585172 d1oeya_ Neutrophil cytosol factor 2 (p67phox component of NADPH oxidase) CAD & PB1 domains beta-Grasp (ubiquitin-like) A:352-358,360-366,371-384,391-395,420-427 65. 1wgh ubiquitin-like 3 0.0579509 d1wgha_ Ubiquitin-like protein 3, Ubl3 Ubiquitin-like beta-Grasp (ubiquitin-like) A:16-24,26-34,38-51,66-70,89-96 66. 2guf Vitamin B12 transporter btuB 0.0579072 d2gufa1 Outer membrane cobalamin transporter BtuB Porins Transmembrane beta-barrels A:75-81,82-85,91-100,105-114,122-131 67. 1yqb Ubiquilin 3 0.0573954 d1yqba1 Ubiquilin-3 Ubiquitin-like beta-Grasp (ubiquitin-like) A:20-29,30-39,42-55,60-66,83-92 68. 1l5p ferredoxin 0.0565899 d1l5pa_ 2Fe-2S ferredoxin 2Fe-2S ferredoxin-like beta-Grasp (ubiquitin-like) A:1-8,9-16,21-30,47-54,87-93 69. 2fug NADH-quinone oxidoreductase chain 1 0.0564653 d2fug13 NADH-quinone oxidoreductase chain 1, Nqo1 Nqo1 middle domain-like beta-Grasp (ubiquitin-like) 1:250-256,261-266,271-281,286-293,325-333 70. 1m94 Protein YNR032c-a 0.0564111 d1m94a_ Ubiquitin-like modifier protein hub1 Ubiquitin-like beta-Grasp (ubiquitin-like) A:1-9,11-19,23-36,41-47,64-73 71. 1wjn Tubulin-folding protein TBCE 0.0562019 d1wjna_ Tubulin-folding protein TbcE Ubiquitin-like beta-Grasp (ubiquitin-like) A:8-17,24-31,34-47,52-58,83-92 72. 2al6 Focal adhesion kinase 1 0.0561041 d2al6a3 Focal adhesion kinase 1 Ubiquitin-like beta-Grasp (ubiquitin-like) A:35-41,52-58,63-76,82-90,119-127 73. 1k8r Protein kinase byr2 0.0559097 d1k8rb_ Protein kinase byr2 Ubiquitin-like beta-Grasp (ubiquitin-like) B:71-77,81-87,90-103,109-117,142-148 74. 3seb STAPHYLOCOCCAL ENTEROTOXIN B 0.0558659 d3seba2 Staphylococcal enterotoxin B, SEB Superantigen toxins, C-terminal domain beta-Grasp (ubiquitin-like) A:129-139,140-151,156-173,181-192,227-237 75. 1vhz ADP compounds hydrolase nudE 0.0557476 d1vhza_ ADP compounds hydrolase NudE Nudix Nudix A:48-57,78-82,87-101,105-115,122-131 76. 1q40 MRNA TRANSPORT REGULATOR Mtr2 0.0550570 d1q40a_ mRNA transport regulator MTR2 NTF2-like Cystatin-like A:50-55,56-59,66-79,139-154,162-173 77. 1b25 PROTEIN (FORMALDEHYDE FERREDOXIN OXIDOREDUCTA 0.0550025 d1b25a2 Formaldehyde ferredoxin oxidoreductase Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, N-terminal domain A:6-14,15-23,33-47,57-62,107-114 78. 1oey NEUTROPHIL CYTOSOL FACTOR 4 0.0549451 d1oeyj_ Neutrophil cytosol factor 4 (p40phox component of NADPH oxidase) CAD & PB1 domains beta-Grasp (ubiquitin-like) J:238-247,248-257,266-279,282-290,323-329 79. 1vk6 NADH pyrophosphatase 0.0544870 d1vk6a2 NADH pyrophosphatase Nudix Nudix A:127-138,156-161,166-180,185-195,198-207 80. 1xd3 UBC protein 0.0534674 d1xd3b_ Ubiquitin Ubiquitin-like beta-Grasp (ubiquitin-like) B:1-8,10-16,22-35,40-46,63-72 81. 1doi 2FE-2S FERREDOXIN 0.0529942 d1doia_ 2Fe-2S ferredoxin 2Fe-2S ferredoxin-like beta-Grasp (ubiquitin-like) A:1-8,36-42,47-56,71-77,109-116 82. 1v5t 8430435I17Rik Protein 0.0528178 d1v5ta_ 8430435i17rik protein Ubiquitin-like beta-Grasp (ubiquitin-like) A:9-15,16-22,29-42,48-52,74-81 83. 1uel UV excision repair protein RAD23 homolog B 0.0524411 d1uela_ Ubiquitin-like domain of Rad23 homolog B (Hhr23B) Ubiquitin-like beta-Grasp (ubiquitin-like) A:1-8,10-17,22-35,43-49,69-75 84. 1i7h FERREDOXIN 0.0518081 d1i7ha_ Adrenodoxin-like ferredoxin 2Fe-2S ferredoxin-like beta-Grasp (ubiquitin-like) A:2-8,14-21,26-35,51-58,94-100 85. 1e7u PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUN 0.0517947 d1e7ua3 Phoshoinositide 3-kinase (PI3K) Ubiquitin-like beta-Grasp (ubiquitin-like) A:218-227,228-237,240-253,270-275,303-309 86. 1b25 PROTEIN (FORMALDEHYDE FERREDOXIN OXIDOREDUCTA 0.0517438 d1b25a2 Formaldehyde ferredoxin oxidoreductase Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, N-terminal domain A:118-125,126-133,140-153,156-161,195-203 87. 1we6 splicing factor, putative 0.0517143 d1we6a_ Splicing factor 3 subunit 1, C-terminal domain Ubiquitin-like beta-Grasp (ubiquitin-like) A:27-34,42-48,53-66,71-76,97-103 88. 1fm0 MOLYBDOPTERIN CONVERTIN FACTOR, SUBUNIT 1 0.0515677 d1fm0d_ Molybdopterin synthase subunit MoaD MoaD/ThiS beta-Grasp (ubiquitin-like) D:1-7,17-22,27-40,51-56,69-76 89. 2a6t SPAC19A8.12 0.0515464 d2a6ta2 mRNA decapping enzyme Dcp2p catalytic domain Nudix Nudix A:97-105,126-130,135-149,160-167,168-178 90. 1wh3 59 kDa 2'-5'-oligoadenylate synthetase like p 0.0512374 d1wh3a_ 2'-5'-oligoadenylate synthetase-like protein, OASL Ubiquitin-like beta-Grasp (ubiquitin-like) A:7-15,17-25,29-42,47-51,70-79 91. 1hzt ISOPENTENYL DIPHOSPHATE DELTA-ISOMERASE 0.0511065 d1hzta_ Isopentenyl diphosphate isomerase Nudix Nudix A:31-41,65-69,75-88,91-109,111-126 92. 1v97 Xanthine dehydrogenase 0.0511012 d1v97a2 Xanthine oxidase, N-terminal domain 2Fe-2S ferredoxin-like beta-Grasp (ubiquitin-like) A:5-11,12-18,25-35,51-60,81-87 93. 1wia hypothetical ubiquitin-like protein (RIKEN cD 0.0508285 d1wiaa_ Ubiquitin-like protein bab25500 (2010008E23Rik) Ubiquitin-like beta-Grasp (ubiquitin-like) A:162-170,172-180,184-194,199-205,224-232 94. 1m4v SET3, superantigen-like protein 0.0506868 d1m4va2 Superantigen-like protein SET3 Superantigen toxins, C-terminal domain beta-Grasp (ubiquitin-like) A:106-118,119-131,136-153,162-169,195-203 95. 1iry hMTH1 0.0506663 d1irya_ 7,8-dihydro-8-oxoguanine triphosphatase Hmth1 Nudix Nudix A:3-12,34-39,44-58,64-75,79-88 96. 1v1o EXOTOXIN 1 0.0506406 d1v1oa2 Exotoxin 1 (SET1, Superantigen-like protein 7) Superantigen toxins, C-terminal domain beta-Grasp (ubiquitin-like) A:112-125,126-140,143-160,168-176,202-212 97. 1v86 DNA segment, Chr 7, Wayne State University 12 0.0503449 d1v86a_ hypothetical D7wsu128e protein Ubiquitin-like beta-Grasp (ubiquitin-like) A:17-25,26-34,38-51,59-61,78-84 98. 2bye PHOSPHOLIPASE C, EPSILON 1 0.0494878 d2byea1 Phospholipase C-epsilon-1 Ubiquitin-like beta-Grasp (ubiquitin-like) A:8-16,23-30,33-43,54-61,101-108 99. 1ryj unknown 0.0494756 d1ryja_ Hypothetical protein MTH1743 MoaD/ThiS beta-Grasp (ubiquitin-like) A:6-14,17-25,28-37,43-48,61-68 100. 1yel At1g16640 0.0493535 d1yela1 At1g16640 DNA-binding pseudobarrel domain DNA-binding pseudobarrel domain A:38-45,47-58,66-75,80-88,90-98 101. 2pia PHTHALATE DIOXYGENASE REDUCTASE 0.0492053 d2piaa3 Phthalate dioxygenase reductase, C-terminal domain 2Fe-2S ferredoxin-like beta-Grasp (ubiquitin-like) A:236-244,245-253,256-265,280-286,315-320 102. 1n6z Hypothetical 12.3 kDa protein in ZDS2-URA5 in 0.0488926 d1n6za_ Hypothetical protein Yml108w Hypothetical protein Yml108w Hypothetical protein Yml108w A:6-14,34-44,49-69,72-78,80-86 103. 1czp FERREDOXIN I 0.0484051 d1czpa_ 2Fe-2S ferredoxin 2Fe-2S ferredoxin-like beta-Grasp (ubiquitin-like) A:1-11,12-22,25-34,49-55,86-92 104. 2b0v NUDIX hydrolase 0.0481325 d2b0va1 Hypothetical protein NE0184 Nudix Nudix A:5-13,36-40,45-59,65-77,78-90 105. 1wf9 NPL4 family protein 0.0477076 d1wf9a1 NPL4-like protein 1 Ubiquitin-like beta-Grasp (ubiquitin-like) A:8-15,16-23,29-42,47-52,85-94 106. 1ur4 GALACTANASE 0.0476508 d1ur4a_ Beta-1,4-galactanase (Trans)glycosidases TIM beta/alpha-barrel A:43-46,48-51,52-61,374-377,379-382 107. 1nyr threonyl-tRNA synthetase 1 0.0466461 d1nyra2 Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain TGS-like beta-Grasp (ubiquitin-like) A:4-9,11-16,21-31,39-43,56-62 108. 1vky S-adenosylmethionine:tRNA ribosyltransferase- 0.0465723 d1vkya_ Queuosine biosynthesis protein queA QueA-like QueA-like A:26-34,35-43,42-51,285-291,330-335 109. 2fkb Putative Nudix hydrolase yfcD 0.0463736 d2fkba1 Hypothetical protein YfcD Nudix Nudix A:36-47,70-75,80-94,100-111,112-124 110. 2fug NADH-quinone oxidoreductase chain 1 0.0461106 d2fug13 NADH-quinone oxidoreductase chain 1, Nqo1 Nqo1 middle domain-like beta-Grasp (ubiquitin-like) 1:250-256,261-266,271-281,292-294,325-333 111. 2fvv Diphosphoinositol polyphosphate phosphohydrol 0.0460702 d2fvva1 Diphosphoinositol polyphosphate phosphohydrolase Nudix Nudix A:16-27,49-53,58-72,76-88,89-99 112. 1f3y DIADENOSINE 5',5'''-P1,P4-TETRAPHOSPHATE HYDR 0.0459664 d1f3ya_ Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) Nudix Nudix A:13-24,43-47,52-66,69-76,102-113 113. 1feh PROTEIN (PERIPLASMIC HYDROGENASE 1) 0.0458905 d1feha2 Fe-only hydrogenase, N-terminal domain 2Fe-2S ferredoxin-like beta-Grasp (ubiquitin-like) A:1-7,8-14,18-27,49-54,68-74 114. 1viu ADP-ribose pyrophosphatase 0.0457917 d1viua_ ADP-ribose pyrophosphatase homologue YffH Nudix Nudix A:45-56,84-88,92-106,112-120,124-136 115. 1urj MAJOR DNA-BINDING PROTEIN 0.0457687 d1urja_ Infected cell protein 8, ICP8 Viral ssDNA binding protein Viral ssDNA binding protein A:912-923,959-967,968-975,975-988,1021-1031 116. 1fob BETA-1,4-GALACTANASE 0.0456267 d1foba_ Beta-1,4-galactanase (Trans)glycosidases TIM beta/alpha-barrel A:22-25,27-30,31-40,316-320,321-325 117. 1feu 50S RIBOSOMAL PROTEIN L25 0.0455332 d1feua_ Ribosomal protein TL5 (general stress protein CTC) Ribosomal protein L25-like Ribosomal protein L25-like A:23-31,32-40,40-52,68-77,82-91 118. 1f3y DIADENOSINE 5',5'''-P1,P4-TETRAPHOSPHATE HYDR 0.0449297 d1f3ya_ Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) Nudix Nudix A:13-24,43-47,52-66,79-83,102-113 119. 1wgk RIKEN cDNA 2900073H19 protein 0.0448974 d1wgka_ C9orf74 homolog MoaD/ThiS beta-Grasp (ubiquitin-like) A:8-19,30-40,44-58,73-79,96-104 120. 1tif TRANSLATION INITIATION FACTOR 3 0.0448793 d1tifa_ Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, N-terminal domain beta-Grasp (ubiquitin-like) A:15-21,23-30,30-42,43-50,55-61 121. 1n62 Carbon monoxide dehydrogenase small chain 0.0448672 d1n62a2 Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain 2Fe-2S ferredoxin-like beta-Grasp (ubiquitin-like) A:3-11,12-20,24-34,50-55,71-76 122. 1rrq MutY 0.0448229 d1rrqa2 Adenine glycosylase MutY, C-terminal domain Nudix Nudix A:234-247,269-273,277-287,298-308,309-323 123. 2bs2 QUINOL-FUMARATE REDUCTASE IRON-SULFUR SUBUNIT 0.0443459 d2bs2b2 Fumarate reductase iron-sulfur protein, N-terminal domain 2Fe-2S ferredoxin-like beta-Grasp (ubiquitin-like) B:3-13,19-30,35-49,65-70,87-93 124. 1zps Phosphoribosyl-AMP cyclohydrolase 0.0443262 d1zpsa1 Phosphoribosyl-AMP cyclohydrolase HisI HisI-like HisI-like A:23-32,33-43,43-54,75-85,89-99 125. 1g0s HYPOTHETICAL 23.7 KDA PROTEIN IN ICC-TOLC INT 0.0442733 d1g0sa_ ADP-ribose pyrophosphatase Nudix Nudix A:57-68,94-99,104-118,121-132,136-148 126. 2azw MutT/nudix family protein 0.0442028 d2azwa1 Hypothetical protein EF1141 Nudix Nudix A:15-25,46-50,55-69,73-89,90-105 127. 2fml MutT/nudix family protein 0.0440937 d2fmla2 Hypothetical protein EF2700, N-terminal domain Nudix Nudix A:38-52,75-79,84-98,106-113,122-132 128. 1xhs Hypothetical UPF0131 protein ytfP 0.0439174 d1xhsa_ Hypothetical protein YtfP BtrG-like BtrG-like A:1-6,48-59,59-72,76-84,85-93 129. 1wid DNA-binding protein RAV1 0.0435996 d1wida_ DNA-binding protein RAV1 DNA-binding pseudobarrel domain DNA-binding pseudobarrel domain A:225-233,235-245,255-265,270-277,283-290 130. 1nek Succinate dehydrogenase iron-sulfur protein 0.0434499 d1nekb2 Succinate dehydogenase iron-sulfur protein, N-terminal domain 2Fe-2S ferredoxin-like beta-Grasp (ubiquitin-like) B:1-10,18-27,34-47,63-68,88-93 131. 1krh Benzoate 1,2-Dioxygenase Reductase 0.0433576 d1krha3 Benzoate dioxygenase reductase, N-terminal domain 2Fe-2S ferredoxin-like beta-Grasp (ubiquitin-like) A:2-11,13-22,25-34,49-55,89-95 132. 1pun Mutator mutT protein 0.0431425 d1puna_ Nucleoside triphosphate pyrophosphorylase (MutT) Nudix Nudix A:1-14,35-38,45-59,65-76,77-89 133. 1rm6 4-hydroxybenzoyl-CoA reductase gamma subunit 0.0431351 d1rm6c2 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, N-terminal domain 2Fe-2S ferredoxin-like beta-Grasp (ubiquitin-like) C:1-10,11-20,23-33,49-54,69-75 134. 1qqr STREPTOKINASE DOMAIN B 0.0424863 d1qqra_ Streptokinase Staphylokinase/streptokinase beta-Grasp (ubiquitin-like) A:157-169,182-189,195-212,213-227,266-279 135. 1wpg Sarcoplasmic/endoplasmic reticulum calcium AT 0.0422226 d1wpga3 Calcium ATPase Metal cation-transporting ATPase, ATP-binding domain N Metal cation-transporting ATPase, ATP-binding domain N A:526-531,532-537,538-555,560-568,591-599 136. 1nqz CoA pyrophosphatase (MutT/nudix family protei 0.0419445 d1nqza_ Coenzyme A pyrophosphatase Nudix Nudix A:33-45,69-73,78-92,98-110,112-123 137. 2b06 MutT/nudix family protein 0.0419287 d2b06a1 Hypothetical protein SP1235 (spr1115) Nudix Nudix A:4-19,41-45,50-64,68-80,81-94 138. 1l4d STREPTOKINASE 0.0417519 d1l4db_ Streptokinase Staphylokinase/streptokinase beta-Grasp (ubiquitin-like) B:15-27,37-42,75-91,97-104,132-146 139. 2sak STAPHYLOKINASE 0.0415282 d2saka_ Staphylokinase Staphylokinase/streptokinase beta-Grasp (ubiquitin-like) A:22-34,36-49,56-72,76-82,122-135 140. 1rrq MutY 0.0413189 d1rrqa2 Adenine glycosylase MutY, C-terminal domain Nudix Nudix A:234-247,269-273,277-287,292-298,309-323 141. 1vle Pyrogallol hydroxytransferase small subunit 0.0411879 d1vlen2 Transhydroxylase beta subunit, BthL, N-terminal domain 4Fe-4S ferredoxins Ferredoxin-like N:2-10,153-160,160-172,173-175,185-190 142. 1vcd Ndx1 0.0406372 d1vcda1 AP6A hydrolase Ndx1 Nudix Nudix A:1-12,29-32,38-52,58-69,71-84 143. 1rya GDP-mannose mannosyl hydrolase 0.0406108 d1ryaa_ GDP-mannose mannosyl hydrolase NudD Nudix Nudix A:17-28,49-53,58-72,80-92,99-112 144. 1ty0 putative exotoxin (superantigen) 0.0404727 d1ty0a2 Streptococcal pyrogenic exotoxin Spe-J Superantigen toxins, C-terminal domain beta-Grasp (ubiquitin-like) A:104-111,112-120,130-147,156-165,200-210 145. 1kqf FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, IRO 0.0397852 d1kqfb1 Formate dehydrogenase N, iron-sulfur (beta) subunit 4Fe-4S ferredoxins Ferredoxin-like B:30-36,183-188,188-207,210-215,223-230 146. 1hz6 PROTEIN L 0.0395679 d1hz6a_ Immunoglobulin light chain-binding domain of protein L Immunoglobulin-binding domains beta-Grasp (ubiquitin-like) A:3-13,15-25,25-45,45-53,56-64 147. 1q40 mRNA export factor MEX67 0.0393856 d1q40b_ NTF2-like domain of mRNA export factor MEX67 NTF2-like Cystatin-like B:335-342,385-388,388-400,471-484,488-501 148. 1u20 U8 snoRNA-binding protein X29 0.0390701 d1u20a1 U8 snorna-binding protein x29 Nudix Nudix A:32-49,71-75,81-95,107-116,118-129 149. 1h0h FORMATE DEHYDROGENASE (SMALL SUBUNIT) 0.0388259 d1h0hb_ Tungsten containing formate dehydrogenase, small subunit 4Fe-4S ferredoxins Ferredoxin-like B:2-8,160-165,165-185,186-190,196-203 150. 1jkg TAP 0.0385639 d1jkgb_ NTF2-like domain of Tip associating protein, TAP NTF2-like Cystatin-like B:414-420,455-458,458-470,507-523,525-539 151. 1sjy MutT/nudix family protein 0.0385356 d1sjya_ Hypothetical protein DR1025 Nudix Nudix A:12-23,48-52,57-71,75-88,90-103 152. 1x51 A/G-specific adenine DNA glycosylase 0.0381083 d1x51a1 A/G-specific adenine DNA glycosylase Nudix Nudix A:18-31,54-58,61-78,85-96,97-109 153. 1nww Limonene-1,2-epoxide hydrolase 0.0376067 d1nwwa_ Limonene-1,2-epoxide hydrolase NTF2-like Cystatin-like A:51-56,60-63,63-78,108-124,125-134 154. 1mp2 ADPR pyrophosphatase 0.0370261 d1mp2a_ ADP-ribose pyrophosphatase Nudix Nudix A:34-53,75-79,85-99,103-113,117-129 155. 1vcd Ndx1 0.0369918 d1vcda1 AP6A hydrolase Ndx1 Nudix Nudix A:1-12,29-32,38-52,54-58,71-84 156. 2sak STAPHYLOKINASE 0.0364458 d2saka_ Staphylokinase Staphylokinase/streptokinase beta-Grasp (ubiquitin-like) A:22-34,36-49,56-72,86-95,122-135 157. 1ktg Diadenosine Tetraphosphate Hydrolase 0.0363201 d1ktga_ Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) Nudix Nudix A:2-15,34-39,44-58,70-79,80-93 158. 1v8y ADP-ribose pyrophosphatase 0.0362555 d1v8ya_ ADP-ribose pyrophosphatase Nudix Nudix A:27-41,65-69,74-88,92-101,105-117 159. 1tuh hypothetical protein EGC068 0.0361193 d1tuha_ Hypothetical protein egc068 from a soil-derived mobile gene cassette NTF2-like Cystatin-like A:51-56,62-67,67-83,113-128,129-139 160. 1sjy MutT/nudix family protein 0.0355227 d1sjya_ Hypothetical protein DR1025 Nudix Nudix A:12-23,48-52,57-71,73-75,90-103 161. 1s5a Hypothetical protein yesE 0.0354862 d1s5aa_ Hypothetical protein YesE NTF2-like Cystatin-like A:36-41,49-53,53-68,100-116,117-126 162. 2a15 HYPOTHETICAL PROTEIN Rv0760c 0.0351927 d2a15a1 Hypothetical protein Rv0760c NTF2-like Cystatin-like A:36-40,53-56,56-72,102-117,119-128 163. 1igr PROTEIN (INSULIN-LIKE GROWTH FACTOR RECEPTOR 0.0347923 d1igra3 Type 1 insulin-like growth factor receptor Cys-rich domain Growth factor receptor domain Knottins (small inhibitors, toxins, lectins) A:238-242,244-248,248-255,266-270,271-275 164. 1ktg Diadenosine Tetraphosphate Hydrolase 0.0335604 d1ktga_ Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) Nudix Nudix A:2-15,34-39,44-58,63-66,80-93 165. 1ut9 CELLULOSE 1,4-BETA-CELLOBIOSIDASE 0.0331818 d1ut9a1 Cellulose 1,4-beta-cellobiosidase CbhA Six-hairpin glycosidases alpha/alpha toroid A:353-359,373-377,434-452,466-472,486-493 166. 1q3i Na,K-ATPase 0.0331422 d1q3ia_ Sodium/potassium-transporting ATPase alpha chain Metal cation-transporting ATPase, ATP-binding domain N Metal cation-transporting ATPase, ATP-binding domain N A:512-517,518-523,524-542,543-553,576-587 167. 1ut9 CELLULOSE 1,4-BETA-CELLOBIOSIDASE 0.0314525 d1ut9a1 Cellulose 1,4-beta-cellobiosidase CbhA Six-hairpin glycosidases alpha/alpha toroid A:353-359,373-377,434-452,464-467,486-493