1. 1ulr putative acylphosphatase 0.1451800
d1ulra_ Acylphosphatase
Acylphosphatase/BLUF domain-like
Ferredoxin-like
A:2-11,16-29,30-38,40-48,49-63,67-78
2. 1fvq COPPER-TRANSPORTING ATPASE 0.1443001
d1fvqa_ Copper transporter domain ccc2a
HMA, heavy metal-associated domain
Ferredoxin-like
A:1-10,13-28,29-38,39-47,51-63,64-72
3. 1k47 phosphomevalonate kinase 0.1422475
d1k47a2 Phosphomevalonate kinase (PMK)
GHMP Kinase, C-terminal domain
Ferredoxin-like
A:200-209,271-282,285-291,296-304,305-320,321-329
4. 1zpv ACT domain protein 0.1347709
d1zpva1 UPF0237 protein SP0238
ACT-like
Ferredoxin-like
A:1-10,14-27,28-39,40-50,55-71,72-79
5. 1u0s Chemotaxis protein cheA 0.1346983
d1u0sa_ CheY-binding domain of CheA
CheY-binding domain of CheA
Ferredoxin-like
A:176-185,191-207,208-214,227-236,238-250,252-260
6. 1mwq HYPOTHETICAL PROTEIN HI0828 0.1291489
d1mwqa_ Hypothetical protein HI0828
Dimeric alpha+beta barrel
Ferredoxin-like
A:1-10,20-35,36-45,55-65,67-78,85-94
7. 1sc6 D-3-phosphoglycerate dehydrogenase 0.1287333
d1sc6a3 Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain
ACT-like
Ferredoxin-like
A:337-346,347-362,363-374,375-385,386-400,402-410
8. 1y7p Hypothetical protein AF1403 0.1282545
d1y7pa2 Hypothetical protein AF1403, N-terminal domain
ACT-like
Ferredoxin-like
A:2-10,12-24,29-40,44-54,57-69,70-77
9. 1vr6 Phospho-2-dehydro-3-deoxyheptonate aldolase 0.1213003
d1vr6a1 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG)
Aldolase
TIM beta/alpha-barrel
A:1-6,10-25,26-34,35-43,48-57,58-64
10. 2p8i Putative dioxygenase 0.1188919
d2p8ia1 Putative dioxygenase BxeB0224
DOPA-like
Ferredoxin-like
A:9-18,22-38,41-49,56-64,67-80,82-90
11. 1cc8 PROTEIN (METALLOCHAPERONE ATX1) 0.1161440
d1cc8a_ ATX1 metallochaperone protein (ATOX1)
HMA, heavy metal-associated domain
Ferredoxin-like
A:4-12,15-30,32-41,42-50,52-64,66-73
12. 1itp proteinase A inhibitor 1 0.1161036
d1itpa_ Proteinase A inhibitor 1, POIA1
Protease propeptides/inhibitors
Ferredoxin-like
A:4-11,15-30,31-40,41-49,50-61,64-72
13. 1k0v CopZ 0.1140251
d1k0va_ Copper chaperone
HMA, heavy metal-associated domain
Ferredoxin-like
A:1-9,13-28,29-38,39-47,52-65,66-72
14. 1mwy ZntA 0.1134559
d1mwya_ Metal ion-transporting ATPase ZntA, N-terminal domain
HMA, heavy metal-associated domain
Ferredoxin-like
A:3-11,15-30,31-40,41-49,52-64,66-72
15. 1kqk POTENTIAL COPPER-TRANSPORTING ATPASE 0.1131990
d1kqka_ Potential copper-translocating P-type ATPase CopA (YvgX)
HMA, heavy metal-associated domain
Ferredoxin-like
A:2-11,14-29,30-39,40-48,53-65,66-74
16. 1kb9 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE 0.1129944
d1kb9a1 Cytochrome bc1 core subunit 1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:48-59,79-90,91-99,100-109,112-128,205-212
17. 1u8s glycine cleavage system transcriptional repre 0.1128032
d1u8sa2 putative transcriptional repressor VC2159
ACT-like
Ferredoxin-like
A:91-101,105-118,119-130,139-150,154-170,171-180
18. 1ygy D-3-phosphoglycerate dehydrogenase 0.1127015
d1ygya3 Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain
ACT-like
Ferredoxin-like
A:454-463,466-479,481-490,495-503,507-519,518-528
19. 1nza Divalent cation tolerance protein 0.1112347
d1nzaa_ Cut A1
GlnB-like
Ferredoxin-like
A:1-10,11-26,28-36,51-61,63-76,81-87
20. 1vgg Conserved Hypothetical Protein TT1634 0.1101564
d1vgga_ Hypothetical protein TT1634 (TTHA1091)
Ta1353-like
Ta1353-like
A:14-22,23-39,42-51,79-87,91-102,104-113
21. 1ppj Ubiquinol-cytochrome C reductase complex core 0.1094811
d1ppjb1 Cytochrome bc1 core subunit 2
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
B:43-53,81-93,94-102,103-113,115-130,203-210
22. 1gxu HYDROGENASE MATURATION PROTEIN HYPF 0.1094811
d1gxua_ Hydrogenase maturation protein HypF N-terminal domain (HypF-ACP)
Acylphosphatase/BLUF domain-like
Ferredoxin-like
A:4-16,21-34,36-43,44-51,53-65,70-83
23. 1mwq HYPOTHETICAL PROTEIN HI0828 0.1083658
d1mwqa_ Hypothetical protein HI0828
Dimeric alpha+beta barrel
Ferredoxin-like
A:1-10,20-35,36-45,55-65,78-84,85-94
24. 2f1f Acetolactate synthase isozyme III small subun 0.1083424
d2f1fa1 Acetolactate synthase small subunit, IlvH
ACT-like
Ferredoxin-like
A:2-11,12-27,29-38,42-51,53-68,69-76
25. 1ear UREASE ACCESSORY PROTEIN UREE 0.1081315
d1eara2 Urease metallochaperone UreE, C-terminal domain
Urease metallochaperone UreE, C-terminal domain
Ferredoxin-like
A:75-83,85-100,103-107,108-114,115-126,127-135
26. 1ppj Ubiquinol-cytochrome C reductase complex core 0.1078749
d1ppjb1 Cytochrome bc1 core subunit 2
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
B:43-53,64-73,94-102,103-113,115-130,203-210
27. 1scj SUBTILISIN E 0.1067008
d1scjb_ Subtilisin prosegment
Protease propeptides/inhibitors
Ferredoxin-like
B:308-315,322-334,335-341,345-351,352-362,364-371
28. 1rf8 Eukaryotic translation initiation factor 4E 0.1061346
d1rf8a_ Translation initiation factor eIF4e
eIF4e-like
eIF4e-like
A:112-120,125-141,148-157,160-168,171-187,193-199
29. 2fuf Large T antigen 0.1057418
d2fufa1 The origin DNA-binding domain of SV40 T-antigen
Origin of replication-binding domain, RBD-like
Origin of replication-binding domain, RBD-like
A:157-164,164-180,181-190,191-199,204-216,221-227
30. 2bz2 NEGATIVE ELONGATION FACTOR E 0.1050420
d2bz2a1 Negative elongation factor E, NELF-E
RNA-binding domain, RBD
Ferredoxin-like
A:39-46,50-62,63-72,73-81,82-96,103-107
31. 1koh TIP ASSOCIATING PROTEIN 0.1043623
d1koha2 mRNA export factor tap
RNA-binding domain, RBD
Ferredoxin-like
A:119-126,131-143,150-156,157-164,165-176,188-194
32. 2bop PROTEIN (E2) 0.1040366
d2bopa_ Papillomavirus-1 E2 protein
Viral DNA-binding domain
Ferredoxin-like
A:326-333,334-350,353-361,374-380,382-394,399-406
33. 1ofd FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 2 0.1030928
d1ofda3 Alpha subunit of glutamate synthase, N-terminal domain
N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Ntn hydrolase-like
A:72-80,82-101,102-110,126-135,140-159,163-170
34. 1r6v subtilisin-like serine protease 0.1029866
d1r6va_ Fervidolysin
Subtilisin-like
Subtilisin-like
A:40-47,48-60,61-69,70-77,81-93,96-102
35. 1w1o CYTOKININ DEHYDROGENASE 1 0.1028172
d1w1oa1 Cytokinin dehydrogenase 1
FAD-linked oxidases, C-terminal domain
Ferredoxin-like
A:248-257,258-271,284-294,325-336,344-358,363-370
36. 1ztp Basophilic leukemia expressed protein BLES03 0.1023751
d1ztpa1 Basophilic leukemia expressed protein BLES03
eIF4e-like
eIF4e-like
A:125-134,135-153,156-161,169-178,181-196,199-205
37. 1h72 HOMOSERINE KINASE 0.1018953
d1h72c2 Homoserine kinase
GHMP Kinase, C-terminal domain
Ferredoxin-like
C:170-177,241-250,252-259,263-270,273-286,287-293
38. 2a6o ISHp608 Transposase 0.1013274
d2a6oa1 ISHP608 transposase
Transposase IS200-like
Ferredoxin-like
A:17-25,33-52,53-62,63-71,72-76,111-116
39. 1r8h Regulatory protein E2 0.1008369
d1r8ha_ Papillomavirus-1 E2 protein
Viral DNA-binding domain
Ferredoxin-like
A:282-291,292-307,310-318,329-335,337-348,354-363
40. 1mwq HYPOTHETICAL PROTEIN HI0828 0.1006543
d1mwqa_ Hypothetical protein HI0828
Dimeric alpha+beta barrel
Ferredoxin-like
A:1-10,13-21,36-45,55-65,67-78,85-94
41. 2fge zinc metalloprotease (insulinase family) 0.1006441
d2fgea4 Presequence protease 1, PREP1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:58-67,74-87,105-114,115-124,125-143,234-242
42. 1s7i hypothetical protein PA1349 0.0999101
d1s7ia_ Hypothetical protein PA1349
Dimeric alpha+beta barrel
Ferredoxin-like
A:7-16,24-46,47-54,82-92,94-105,111-118
43. 1nwa Peptide methionine sulfoxide reductase msrA 0.0999001
d1nwaa_ Peptide methionine sulfoxide reductase
Peptide methionine sulfoxide reductase
Ferredoxin-like
A:4-12,13-24,26-36,48-59,64-77,93-99
44. 1oy8 Acriflavine resistance protein B 0.0997208
d1oy8a3 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Ferredoxin-like
A:570-578,583-603,605-614,623-632,643-659,661-667
45. 2cdq ASPARTOKINASE 0.0993641
d2cdqa2 Aspartokinase
ACT-like
Ferredoxin-like
A:341-348,354-369,371-379,380-387,397-412,412-419
46. 2f06 conserved hypothetical protein 0.0986582
d2f06a2 Hypothetical protein BT0572
ACT-like
Ferredoxin-like
A:4-11,12-28,30-40,41-50,51-63,65-70
47. 1q8l Copper-transporting ATPase 1 0.0981547
d1q8la_ Menkes copper-transporting ATPase
HMA, heavy metal-associated domain
Ferredoxin-like
A:8-17,23-34,36-45,46-54,59-71,72-76
48. 1jx4 DNA polymerase IV (family Y) 0.0971062
d1jx4a2 DinB homolog (DBH)
DNA/RNA polymerases
DNA/RNA polymerases
A:1-9,92-97,98-103,105-112,117-137,139-146
49. 1fe0 COPPER TRANSPORT PROTEIN ATOX1 0.0970591
d1fe0a_ ATX1 metallochaperone protein (ATOX1)
HMA, heavy metal-associated domain
Ferredoxin-like
A:2-9,12-27,29-36,37-44,47-59,61-66
50. 1gpj GLUTAMYL-TRNA REDUCTASE 0.0968711
d1gpja3 Glutamyl tRNA-reductase catalytic, N-terminal domain
Glutamyl tRNA-reductase catalytic, N-terminal domain
Ferredoxin-like
A:3-11,26-38,40-48,49-57,58-70,73-78
51. 1q8b Protein yjcS 0.0967773
d1q8ba_ Hypothetical protein YjcS
Dimeric alpha+beta barrel
Ferredoxin-like
A:12-23,27-46,47-56,61-70,81-91,92-104
52. 1ppj Ubiquinol-cytochrome C reductase complex core 0.0959509
d1ppja1 Cytochrome bc1 core subunit 1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:33-45,70-83,84-92,93-103,105-120,194-202
53. 1yrx hypothetical protein Rsph03001874 0.0951294
d1yrxa1 Sensor of blue light AppA
Acylphosphatase/BLUF domain-like
Ferredoxin-like
A:17-26,30-49,50-58,59-67,68-82,84-95
54. 1l8b EUKARYOTIC TRANSLATION INITIATION FACTOR 4E 0.0950661
d1l8ba_ Translation initiation factor eIF4e
eIF4e-like
eIF4e-like
A:109-119,125-140,148-158,159-169,172-188,195-199
55. 1phz PROTEIN (PHENYLALANINE HYDROXYLASE) 0.0949487
d1phza1 Phenylalanine hydroxylase N-terminal domain
ACT-like
Ferredoxin-like
A:33-43,46-59,64-70,75-85,87-103,106-111
56. 2d69 Ribulose bisphosphate carboxylase 0.0944465
d2d69a2 Ribulose 1,5-bisphosphate carboxylase-oxygenase
RuBisCO, large subunit, small (N-terminal) domain
Ferredoxin-like
A:25-35,38-53,70-79,80-89,97-107,114-126
57. 1r9w Replication protein E1 0.0941176
d1r9wa_ Replication initiation protein E1
Origin of replication-binding domain, RBD-like
Origin of replication-binding domain, RBD-like
A:241-249,251-258,265-276,279-289,293-306,311-316
58. 2cg4 REGULATORY PROTEIN ASNC 0.0937734
d2cg4a2 Regulatory protein AsnC
Dimeric alpha+beta barrel
Ferredoxin-like
A:67-76,81-93,94-100,106-114,115-131,133-141
59. 2ftr BH0200 0.0936242
d2ftra1 Hypothetical protein BH0200
Dimeric alpha+beta barrel
Ferredoxin-like
A:5-16,30-38,41-49,58-67,79-94,96-106
60. 1kb9 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE 0.0930319
d1kb9b1 Cytochrome bc1 core subunit 2
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
B:27-39,63-75,75-84,85-95,97-112,184-191
61. 2u2f PROTEIN (SPLICING FACTOR U2AF 65 KD SUBUNIT) 0.0929800
d2u2fa_ Splicing factor U2AF 65 KDa subunit
RNA-binding domain, RBD
Ferredoxin-like
A:2-8,14-26,28-35,44-50,52-64,73-79
62. 1jj2 RIBOSOMAL PROTEIN L10E 0.0928333
d1jj2h_ Ribosomal protein L10e
Ribosomal protein L16p/L10e
alpha/beta-Hammerhead
H:43-52,57-76,81-86,127-137,140-154,156-163
63. 1q2l Protease III 0.0925754
d1q2la3 Protease III
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:288-298,306-317,332-341,347-358,364-383,454-460
64. 2cq3 RNA-binding protein 9 0.0923361
d2cq3a1 RNA-binding protein 9
RNA-binding domain, RBD
Ferredoxin-like
A:119-127,133-145,146-154,161-169,169-183,190-195
65. 2fyx transposase, putative 0.0922679
d2fyxa1 Putative transposase DR0177
Transposase IS200-like
Ferredoxin-like
A:11-20,27-46,47-56,57-65,66-70,107-111
66. 1wi6 Hypothetical protein (RIKEN cDNA 1300006N24) 0.0918780
d1wi6a1 Ribonucleoprotein PTB-binding 1, Raver-1
RNA-binding domain, RBD
Ferredoxin-like
A:69-73,79-88,91-99,102-109,110-123,128-135
67. 2dya Nucleoside diphosphate kinase 0.0915919
d2dyaa1 Nucleoside diphosphate kinase, NDK
Nucleoside diphosphate kinase, NDK
Ferredoxin-like
A:7-15,22-35,36-45,75-84,85-95,122-126
68. 1vio Ribosomal small subunit pseudouridine synthas 0.0912326
d1vioa1 Ribosomal small subunit pseudouridine 516 synthase RsuA
Pseudouridine synthase
Pseudouridine synthase
A:129-138,141-151,164-170,172-179,184-194,195-206
69. 2cq1 PTB-like protein L 0.0911993
d2cq1a1 Polypyrimidine tract-binding protein 2, PTBP2
RNA-binding domain, RBD
Ferredoxin-like
A:60-65,71-83,84-93,94-102,103-118,126-131
70. 1b3t PROTEIN (NUCLEAR PROTEIN EBNA1) 0.0910664
d1b3ta_ Epstein barr virus nuclear antigen-1 (ebna1)
Viral DNA-binding domain
Ferredoxin-like
A:504-511,513-529,531-539,559-567,568-587,593-600
71. 1urr CG18505 PROTEIN 0.0908678
d1urra_ Acylphosphatase 2 (Cg18505)
Acylphosphatase/BLUF domain-like
Ferredoxin-like
A:6-16,21-34,35-43,45-54,54-68,73-86
72. 1i1g TRANSCRIPTIONAL REGULATOR LRPA 0.0908348
d1i1ga2 LprA
Dimeric alpha+beta barrel
Ferredoxin-like
A:63-73,76-88,89-96,101-109,110-125,127-136
73. 1q2l Protease III 0.0908100
d1q2la1 Protease III
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:546-557,580-591,592-598,600-610,612-627,698-707
74. 1n0u Elongation factor 2 0.0906043
d1n0ua5 Elongation factor 2 (eEF-2)
EF-G C-terminal domain-like
Ferredoxin-like
A:726-736,736-751,752-759,765-774,779-789,792-802
75. 1kvk mevalonate kinase 0.0904895
d1kvka2 Mevalonate kinase
GHMP Kinase, C-terminal domain
Ferredoxin-like
A:230-239,312-326,328-332,337-344,349-364,365-372
76. 1vqs hypothetical protein AGR_L_1239 0.0898715
d1vqsa_ Hypothetical protein Atu4242
Dimeric alpha+beta barrel
Ferredoxin-like
A:1-11,25-35,36-43,49-58,59-74,86-96
77. 1ffg CHEMOTAXIS PROTEIN CHEA 0.0897263
d1ffgb_ CheY-binding domain of CheA
CheY-binding domain of CheA
Ferredoxin-like
B:159-166,168-184,185-192,193-200,204-216,220-226
78. 2cph RNA binding motif protein 19 0.0896620
d2cpha1 Probable RNA-binding protein 19, Rbm19
RNA-binding domain, RBD
Ferredoxin-like
A:463-468,474-486,487-493,505-512,513-528,535-540
79. 1zh5 Lupus La protein 0.0896379
d1zh5a2 Lupus LA protein
RNA-binding domain, RBD
Ferredoxin-like
A:112-117,123-135,136-143,152-159,160-171,180-185
80. 1mwq HYPOTHETICAL PROTEIN HI0828 0.0895255
d1mwqa_ Hypothetical protein HI0828
Dimeric alpha+beta barrel
Ferredoxin-like
A:1-10,13-21,36-45,55-65,78-84,85-94
81. 1fvg PEPTIDE METHIONINE SULFOXIDE REDUCTASE 0.0891902
d1fvga_ Peptide methionine sulfoxide reductase
Peptide methionine sulfoxide reductase
Ferredoxin-like
A:63-71,72-83,85-95,111-122,127-140,156-161
82. 1fi4 MEVALONATE 5-DIPHOSPHATE DECARBOXYLASE 0.0891186
d1fi4a2 Mevalonate 5-diphosphate decarboxylase
GHMP Kinase, C-terminal domain
Ferredoxin-like
A:191-199,275-293,297-301,305-313,315-328,367-375
83. 1x4d Matrin 3 0.0886289
d1x4da1 Matrin 3
RNA-binding domain, RBD
Ferredoxin-like
A:16-22,28-41,42-49,53-60,61-76,84-90
84. 1uek 4-(cytidine 5'-diphospho)-2C-methyl-D-erythri 0.0883236
d1ueka2 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE
GHMP Kinase, C-terminal domain
Ferredoxin-like
A:150-159,210-224,225-231,235-241,243-258,258-266
85. 1wj9 CRISPR-associated protein 0.0881368
d1wj9a1 Hypothetical protein TTHB192
CRISPR-associated protein
Ferredoxin-like
A:1-9,21-34,43-49,56-64,68-73,76-85
86. 1kb9 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE 0.0875197
d1kb9b1 Cytochrome bc1 core subunit 2
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
B:27-39,46-55,75-84,85-95,97-112,184-191
87. 1kb9 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE 0.0874585
d1kb9a2 Cytochrome bc1 core subunit 1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:258-266,300-310,312-320,325-335,336-340,431-438
88. 1vbk hypothetical protein PH1313 0.0873668
d1vbka2 Hypothetical protein PH1313, N-terminal domain
THUMP domain-like
THUMP domain
A:2-8,18-38,41-48,49-55,57-69,71-82
89. 1vmb 30S ribosomal protein S6 0.0872676
d1vmba_ Ribosomal protein S6
Ribosomal protein S6
Ferredoxin-like
A:6-17,20-40,41-54,62-74,77-89,90-99
90. 1rki hypothetical protein 0.0868131
d1rkia1 Hypothetical protein PAE0736
THUMP domain-like
THUMP domain
A:2-10,13-26,32-37,40-47,47-58,63-71
91. 2cpf RNA binding motif protein 19 0.0867002
d2cpfa1 Probable RNA-binding protein 19, Rbm19
RNA-binding domain, RBD
Ferredoxin-like
A:362-366,372-384,385-392,405-412,413-427,434-438
92. 1uj6 ribose 5-phosphate isomerase 0.0865876
d1uj6a2 D-ribose-5-phosphate isomerase (RpiA), lid domain
D-ribose-5-phosphate isomerase (RpiA), lid domain
Ferredoxin-like
A:135-141,144-156,157-162,174-182,187-199,200-205
93. 1n0u Elongation factor 2 0.0865276
d1n0ua4 Elongation factor 2 (eEF-2)
EF-G C-terminal domain-like
Ferredoxin-like
A:488-496,500-516,518-524,526-533,534-551,553-558
94. 1tdj BIOSYNTHETIC THREONINE DEAMINASE 0.0863558
d1tdja2 Allosteric threonine deaminase C-terminal domain
ACT-like
Ferredoxin-like
A:337-346,351-360,363-369,376-385,387-403,403-408
95. 1lfw pepV 0.0860511
d1lfwa2 Aminopeptidase PepV
Bacterial exopeptidase dimerisation domain
Ferredoxin-like
A:187-197,293-308,327-339,340-352,356-369,371-376
96. 2fge zinc metalloprotease (insulinase family) 0.0859550
d2fgea4 Presequence protease 1, PREP1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:58-67,94-103,105-114,115-124,125-143,234-242
97. 1x4h RNA-binding protein 28 0.0858516
d1x4ha1 RNA-binding protein 28
RNA-binding domain, RBD
Ferredoxin-like
A:16-22,28-40,41-48,58-65,66-79,93-98
98. 1x0p hypothetical protein Tll0078 0.0854628
d1x0pa1 Hypothetical protein Tll0078
Acylphosphatase/BLUF domain-like
Ferredoxin-like
A:103-113,117-136,137-145,146-155,155-170,171-183
99. 1h72 HOMOSERINE KINASE 0.0851209
d1h72c2 Homoserine kinase
GHMP Kinase, C-terminal domain
Ferredoxin-like
C:170-177,241-250,252-259,263-270,270-274,287-293
100. 1u2c Dystroglycan 0.0848896
d1u2ca2 Dystroglycan, domain 2
Dystroglycan, domain 2
Dystroglycan, domain 2
A:185-195,201-217,223-228,252-263,271-282,291-301
101. 1mg7 early switch protein xol-1 2.2k splice form 0.0848824
d1mg7a2 Early switch protein XOL-1
GHMP Kinase, C-terminal domain
Ferredoxin-like
A:213-221,279-297,298-306,307-314,316-321,340-347
102. 1u8s glycine cleavage system transcriptional repre 0.0848536
d1u8sa1 putative transcriptional repressor VC2159
ACT-like
Ferredoxin-like
A:4-15,18-31,32-43,44-55,55-74,75-82
103. 1kn6 Prohormone Convertase 1 0.0848176
d1kn6a_ Prohormone convertase 1 pro-domain
Protease propeptides/inhibitors
Ferredoxin-like
A:6-12,15-27,28-33,39-45,56-61,71-76
104. 2ewh Major carboxysome shell protein 1A 0.0847673
d2ewha1 Major carboxysome shell protein 1A, CsoS1A
CcmK-like
Ferredoxin-like
A:7-16,16-32,33-42,44-52,53-71,74-83
105. 1f9y PROTEIN (6-HYDROXYMETHYL-7,8-DIHYDROPTERIN PY 0.0846382
d1f9ya_ 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
Ferredoxin-like
A:1-10,13-28,30-43,52-63,65-81,93-102
106. 1rjj expressed protein 0.0840760
d1rjja_ Hypothetical protein AT5G22580
Dimeric alpha+beta barrel
Ferredoxin-like
A:4-14,19-37,38-46,57-65,66-77,90-101
107. 1fj7 NUCLEOLIN RBD1 0.0839208
d1fj7a_ Nucleolin
RNA-binding domain, RBD
Ferredoxin-like
A:18-24,30-46,48-56,59-66,67-80,87-91
108. 5rub RUBISCO (RIBULOSE-1,5-BISPHOSPHATE CARBOXYLAS 0.0833750
d5ruba2 Ribulose 1,5-bisphosphate carboxylase-oxygenase
RuBisCO, large subunit, small (N-terminal) domain
Ferredoxin-like
A:22-33,37-51,69-77,78-87,100-110,117-128
109. 1wi8 Eukaryotic translation initiation factor 4B 0.0833681
d1wi8a_ Eukaryotic translation initiation factor 4B
RNA-binding domain, RBD
Ferredoxin-like
A:95-102,108-117,120-126,139-145,146-159,166-171
110. 1vr7 S-adenosylmethionine decarboxylase proenzyme 0.0833125
d1vr7a1 S-adenosylmethionine decarboxylase (SamDC, SpeH)
S-adenosylmethionine decarboxylase
S-adenosylmethionine decarboxylase
A:4-14,22-38,62-72,73-84,88-101,103-113
111. 1x5o RNA binding motif, single-stranded interactin 0.0828089
d1x5oa1 RNA-binding motif, single-stranded-interacting protein 1, RBMS1
RNA-binding domain, RBD
Ferredoxin-like
A:26-32,38-50,51-58,67-74,75-89,104-108
112. 1mli MUCONOLACTONE ISOMERASE 0.0823045
d1mlia_ Muconalactone isomerase, MLI
Dimeric alpha+beta barrel
Ferredoxin-like
A:1-10,16-38,39-46,51-58,60-71,76-84
113. 2fge zinc metalloprotease (insulinase family) 0.0822301
d2fgea2 Presequence protease 1, PREP1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:811-820,828-852,854-863,864-875,876-887,967-974
114. 1o51 Hypothetical protein TM0021 0.0820412
d1o51a_ Hypothetical protein TM0021
GlnB-like
Ferredoxin-like
A:-1-11,18-31,34-41,61-71,71-86,89-98
115. 1tuv Protein ygiN 0.0820277
d1tuva_ Hypothetical protein YgiN
Dimeric alpha+beta barrel
Ferredoxin-like
A:1-11,15-34,36-44,58-67,68-78,91-101
116. 1u7l Vacuolar ATP synthase subunit C 0.0817996
d1u7la_ Vacuolar ATP synthase subunit C
Vacuolar ATP synthase subunit C
Vacuolar ATP synthase subunit C
A:9-18,29-38,43-48,324-332,333-349,386-392
117. 1kkh Mevalonate Kinase 0.0817996
d1kkha2 Mevalonate kinase
GHMP Kinase, C-terminal domain
Ferredoxin-like
A:192-198,259-274,273-279,285-291,295-307,308-314
118. 1gmu UREE 0.0817728
d1gmua2 Urease metallochaperone UreE, C-terminal domain
Urease metallochaperone UreE, C-terminal domain
Ferredoxin-like
A:71-79,81-96,99-103,104-110,111-122,125-131
119. 2cqg TAR DNA-binding protein-43 0.0817394
d2cqga1 TAR DNA-binding protein 43, TDP-43
RNA-binding domain, RBD
Ferredoxin-like
A:106-110,116-128,129-136,146-153,154-165,170-177
120. 1vqs hypothetical protein AGR_L_1239 0.0816393
d1vqsa_ Hypothetical protein Atu4242
Dimeric alpha+beta barrel
Ferredoxin-like
A:1-11,25-35,36-43,49-58,73-84,86-96
121. 1r89 tRNA nucleotidyltransferase 0.0814531
d1r89a3 tRNA nucleotidyltransferase, C-terminal domain
PAP/Archaeal CCA-adding enzyme, C-terminal domain
Ferredoxin-like
A:276-285,289-312,313-323,325-335,384-397,412-416
122. 1aw0 MENKES COPPER-TRANSPORTING ATPASE 0.0814200
d1aw0a_ Menkes copper-transporting ATPase
HMA, heavy metal-associated domain
Ferredoxin-like
A:1-11,14-28,30-39,40-49,53-65,66-72
123. 2fzc Aspartate carbamoyltransferase regulatory cha 0.0813471
d2fzcb1 Aspartate carbamoyltransferase
Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
Ferredoxin-like
B:13-23,34-39,41-50,54-63,67-79,81-89
124. 1szw tRNA pseudouridine synthase D 0.0811425
d1szwa_ tRNA pseudouridine synthase TruD
Pseudouridine synthase
Pseudouridine synthase
A:42-51,54-67,72-75,84-93,100-104,108-118
125. 1x4e RNA binding motif, single-stranded interactin 0.0809454
d1x4ea1 RNA-binding motif, single-stranded-interacting protein 2, RBMS2
RNA-binding domain, RBD
Ferredoxin-like
A:8-12,26-30,31-38,48-55,56-71,73-76
126. 1q2l Protease III 0.0809389
d1q2la3 Protease III
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:288-298,322-331,332-341,347-358,364-383,454-460
127. 1x4f Matrin 3 0.0808277
d1x4fa1 Matrin 3
RNA-binding domain, RBD
Ferredoxin-like
A:26-32,39-51,52-61,62-70,71-86,94-99
128. 1wuu Galactokinase 0.0805737
d1wuua2 Galactokinase
GHMP Kinase, C-terminal domain
Ferredoxin-like
A:217-226,322-336,337-344,350-358,358-373,375-381
129. 1no8 ALY 0.0802697
d1no8a_ Nuclear factor Aly
RNA-binding domain, RBD
Ferredoxin-like
A:105-111,117-129,130-137,146-153,154-166,172-181
130. 1o8b RIBOSE 5-PHOSPHATE ISOMERASE 0.0802697
d1o8ba2 D-ribose-5-phosphate isomerase (RpiA), lid domain
D-ribose-5-phosphate isomerase (RpiA), lid domain
Ferredoxin-like
A:130-136,137-151,152-157,165-173,178-190,191-196
131. 2dis unnamed protein product 0.0800705
d2disa1 Hypothetical protein FLJ20273
RNA-binding domain, RBD
Ferredoxin-like
A:9-15,21-34,35-41,53-60,61-75,84-88
132. 2apo Probable tRNA pseudouridine synthase B 0.0799616
d2apoa2 Pseudouridine synthase II TruB
Pseudouridine synthase
Pseudouridine synthase
A:106-117,120-134,155-164,165-174,178-191,192-205
133. 1rjj expressed protein 0.0799552
d1rjja_ Hypothetical protein AT5G22580
Dimeric alpha+beta barrel
Ferredoxin-like
A:4-14,19-37,38-46,57-65,76-91,90-101
134. 2hmf Probable aspartokinase 0.0795229
d2hmfa3 Aspartokinase
ACT-like
Ferredoxin-like
A:317-328,330-346,348-354,358-367,367-382,394-402
135. 1k8w tRNA Pseudouridine Synthase B 0.0793714
d1k8wa5 Pseudouridine synthase II TruB
Pseudouridine synthase
Pseudouridine synthase
A:72-83,104-116,156-165,166-176,179-192,194-206
136. 1ppj Ubiquinol-cytochrome C reductase complex core 0.0793525
d1ppja2 Cytochrome bc1 core subunit 1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:250-262,264-278,304-312,316-327,327-349,420-427
137. 2byc BLUE LIGHT SENSING 0.0788022
d2byca1 Blue light receptor BlrB
Acylphosphatase/BLUF domain-like
Ferredoxin-like
A:4-14,17-37,38-45,47-56,56-70,72-84
138. 1h6k 20 KDA NUCLEAR CAP BINDING PROTEIN 0.0785731
d1h6kx_ CBP20, 20KDa nuclear cap-binding protein
RNA-binding domain, RBD
Ferredoxin-like
X:40-46,52-64,65-72,82-89,90-104,111-116
139. 1f0x D-LACTATE DEHYDROGENASE 0.0784437
d1f0xa1 D-lactate dehydrogenase
FAD-linked oxidases, C-terminal domain
Ferredoxin-like
A:275-284,285-300,304-311,389-398,397-415,417-422
140. 1uta CELL DIVISION PROTEIN FTSN 0.0784314
d1utaa_ Cell division protein FtsN
Sporulation related repeat
Ferredoxin-like
A:246-256,257-272,275-280,283-293,294-308,313-317
141. 1wi6 Hypothetical protein (RIKEN cDNA 1300006N24) 0.0783822
d1wi6a1 Ribonucleoprotein PTB-binding 1, Raver-1
RNA-binding domain, RBD
Ferredoxin-like
A:69-73,87-91,91-99,102-109,110-123,128-135
142. 2cpi CCR4-NOT transcription complex subunit 4 0.0783576
d2cpia1 E3 ubiquitin protein ligase CNOT4
RNA-binding domain, RBD
Ferredoxin-like
A:110-115,128-136,138-145,157-163,165-179,186-189
143. 1aps ACYLPHOSPHATASE 0.0783453
d1apsa_ Acylphosphatase
Acylphosphatase/BLUF domain-like
Ferredoxin-like
A:6-17,22-34,35-43,44-54,54-68,76-86
144. 1mla MALONYL-COENZYME A ACYL CARRIER PROTEIN TRANS 0.0782228
d1mlaa2 Probable ACP-binding domain of malonyl-CoA ACP transacylase
Probable ACP-binding domain of malonyl-CoA ACP transacylase
Ferredoxin-like
A:130-137,139-152,155-163,165-172,173-187,189-194
145. 2d69 Ribulose bisphosphate carboxylase 0.0782167
d2d69a2 Ribulose 1,5-bisphosphate carboxylase-oxygenase
RuBisCO, large subunit, small (N-terminal) domain
Ferredoxin-like
A:25-35,38-53,70-79,80-89,106-112,114-126
146. 1q2l Protease III 0.0781861
d1q2la4 Protease III
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:65-76,85-97,116-124,125-134,134-152,230-238
147. 1iuj hypothetical protein TT1380 0.0780640
d1iuja_ Hypothetical protein TT1380
Dimeric alpha+beta barrel
Ferredoxin-like
A:1-9,25-32,34-43,49-57,58-68,90-97
148. 1jjc PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN 0.0780336
d1jjcb6 B3/B4 domain of PheRS, PheT
PheT/TilS domain
PheT/TilS domain
B:212-220,243-257,260-265,329-337,365-385,392-396
149. 2fzc Aspartate carbamoyltransferase regulatory cha 0.0778210
d2fzcb1 Aspartate carbamoyltransferase
Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
Ferredoxin-like
B:13-23,22-34,41-50,54-63,67-79,81-89
150. 1r9w Replication protein E1 0.0778089
d1r9wa_ Replication initiation protein E1
Origin of replication-binding domain, RBD-like
Origin of replication-binding domain, RBD-like
A:241-249,257-266,265-276,279-289,293-306,311-316
151. 2bj7 NICKEL RESPONSIVE REGULATOR 0.0774234
d2bj7a2 Nickel responsive regulator NikR, C-terminal domain
ACT-like
Ferredoxin-like
A:53-64,68-81,83-93,95-106,106-120,123-132
152. 1y0z protein product of AT3G21360 0.0771248
d1y0za_ Clavaminate synthase-like protein At3g21360
Clavaminate synthase-like
Double-stranded beta-helix
A:174-183,194-200,216-222,224-234,250-259,268-272
153. 1t1e kumamolisin 0.0770891
d1t1ea2 Pro-kumamolisin activation domain
Protease propeptides/inhibitors
Ferredoxin-like
A:39-47,84-99,100-108,109-117,117-126,155-161
154. 1wdd Ribulose bisphosphate carboxylase large chain 0.0770654
d1wdda2 Ribulose 1,5-bisphosphate carboxylase-oxygenase
RuBisCO, large subunit, small (N-terminal) domain
Ferredoxin-like
A:34-45,49-64,82-90,96-105,112-122,129-140
155. 1jjc PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN 0.0769704
d1jjcb4 Phenylalanyl-tRNA synthetase
Anticodon-binding domain of PheRS
Ferredoxin-like
B:692-703,706-719,721-732,739-750,757-776,777-784
156. 1vgy succinyl-diaminopimelate desuccinylase 0.0769290
d1vgya2 Succinyl-diaminopimelate desuccinylase
Bacterial exopeptidase dimerisation domain
Ferredoxin-like
A:181-196,204-219,231-240,250-260,265-281,283-292
157. 1ieg CAPSID PROTEIN P40: ASSEMBLIN PROTEASE 0.0768994
d1iega_ Human cytomegalovirus protease
Herpes virus serine proteinase, assemblin
Herpes virus serine proteinase, assemblin
A:13-23,64-68,67-79,80-90,118-129,169-175
158. 1m1h Transcription antitermination protein nusG 0.0766342
d1m1ha2 N-utilization substance G protein NusG, N-terminal domain
N-utilization substance G protein NusG, N-terminal domain
Ferredoxin-like
A:11-19,22-38,43-48,137-144,146-156,158-163
159. 2a10 Carbon dioxide concentrating mechanism protei 0.0765931
d2a10a1 Carboxysome shell protein CcmK4
CcmK-like
Ferredoxin-like
A:5-14,14-30,31-40,42-50,51-70,74-82
160. 1o0p Splicing factor U2AF 65 kDa subunit 0.0765462
d1o0pa_ Splicing factor U2AF 65 KDa subunit
RNA-binding domain, RBD
Ferredoxin-like
A:376-382,391-410,411-417,430-437,438-450,459-465
161. 1qd1 FORMIMINOTRANSFERASE-CYCLODEAMINASE 0.0759244
d1qd1a2 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
Formiminotransferase domain of formiminotransferase-cyclodeaminase.
Ferredoxin-like
A:182-190,192-204,218-228,229-239,240-245,263-270
162. 2c5s PROBABLE THIAMINE BIOSYNTHESIS PROTEIN THII 0.0758898
d2c5sa2 Thiamine biosynthesis protein ThiI, N-terminal domain
THUMP domain-like
THUMP domain
A:4-11,35-39,40-47,48-55,58-69,71-83
163. 1r7i 3-hydroxy-3-methylglutaryl-coenzyme A reducta 0.0756544
d1r7ia1 NAD-binding domain of HMG-CoA reductase
NAD-binding domain of HMG-CoA reductase
Ferredoxin-like
A:111-120,123-135,154-168,169-181,197-206,207-215
164. 2cpi CCR4-NOT transcription complex subunit 4 0.0755687
d2cpia1 E3 ubiquitin protein ligase CNOT4
RNA-binding domain, RBD
Ferredoxin-like
A:110-115,117-122,138-145,157-163,165-179,186-189
165. 1cpz PROTEIN (COPZ) 0.0754603
d1cpza_ Copper chaperone
HMA, heavy metal-associated domain
Ferredoxin-like
A:1-8,12-26,27-34,38-45,50-62,63-68
166. 1x4g Nucleolysin TIAR 0.0754262
d1x4ga1 Nucleolysin TIAR
RNA-binding domain, RBD
Ferredoxin-like
A:26-33,38-50,51-60,61-69,70-84,89-96
167. 1l3k HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1 0.0754205
d1l3ka1 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
RNA-binding domain, RBD
Ferredoxin-like
A:15-20,26-38,39-46,56-63,64-75,84-89
168. 1qd1 FORMIMINOTRANSFERASE-CYCLODEAMINASE 0.0752502
d1qd1a2 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
Formiminotransferase domain of formiminotransferase-cyclodeaminase.
Ferredoxin-like
A:182-190,192-204,218-228,229-239,245-261,263-270
169. 1kn6 Prohormone Convertase 1 0.0752219
d1kn6a_ Prohormone convertase 1 pro-domain
Protease propeptides/inhibitors
Ferredoxin-like
A:6-12,15-27,28-33,39-45,60-70,71-76
170. 1dj0 PSEUDOURIDINE SYNTHASE I 0.0750638
d1dj0a_ Pseudouridine synthase I TruA
Pseudouridine synthase
Pseudouridine synthase
A:9-21,34-48,53-56,68-75,79-92,94-103
171. 1vfj nitrogen regulatory protein p-II 0.0749064
d1vfja_ PII (product of glnB)
GlnB-like
Ferredoxin-like
A:1-9,9-24,28-36,55-66,66-82,89-96
172. 2gvk Heme peroxidase 0.0748895
d2gvka1 Hypothetical protein BT1219
Dimeric alpha+beta barrel
Ferredoxin-like
A:22-32,47-60,62-71,107-115,116-132,134-145
173. 2iiz Melanin biosynthesis protein TyrA, putative 0.0748503
d2iiza1 Melanin biosynthesis protein TyrA
Dimeric alpha+beta barrel
Ferredoxin-like
A:19-29,31-55,58-67,101-109,110-126,128-139
174. 1tr0 stable protein 1 0.0748167
d1tr0a_ Boiling stable protein 1
Dimeric alpha+beta barrel
Ferredoxin-like
A:8-17,22-41,43-51,64-72,73-83,97-107
175. 1tuv Protein ygiN 0.0747608
d1tuva_ Hypothetical protein YgiN
Dimeric alpha+beta barrel
Ferredoxin-like
A:1-11,15-34,36-44,58-67,78-89,91-101
176. 1jl0 S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 0.0746714
d1jl0a_ S-adenosylmethionine decarboxylase
S-adenosylmethionine decarboxylase
S-adenosylmethionine decarboxylase
A:11-20,36-48,67-74,75-82,86-103,105-116
177. 1q2l Protease III 0.0746547
d1q2la4 Protease III
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:65-76,105-115,116-124,125-134,134-152,230-238
178. 1tr0 stable protein 1 0.0746213
d1tr0a_ Boiling stable protein 1
Dimeric alpha+beta barrel
Ferredoxin-like
A:8-17,22-41,43-51,64-72,83-97,97-107
179. 1ppj Ubiquinol-cytochrome C reductase complex core 0.0745601
d1ppja1 Cytochrome bc1 core subunit 1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:33-45,52-66,84-92,93-103,105-120,194-202
180. 2hiq Hypothetical protein ydhR 0.0745379
d2hiqa1 Hypothetical protein YdhR
Dimeric alpha+beta barrel
Ferredoxin-like
A:9-18,30-40,42-53,54-64,65-84,88-95
181. 1mg7 early switch protein xol-1 2.2k splice form 0.0743937
d1mg7a2 Early switch protein XOL-1
GHMP Kinase, C-terminal domain
Ferredoxin-like
A:213-221,279-297,298-306,307-314,320-336,340-347
182. 1ysj protein yxeP 0.0743550
d1ysja2 Protein YxeP
Bacterial exopeptidase dimerisation domain
Ferredoxin-like
A:178-188,201-214,227-236,246-255,257-280,281-291
183. 2fge zinc metalloprotease (insulinase family) 0.0743052
d2fgea1 Presequence protease 1, PREP1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:573-583,593-604,622-633,640-652,654-669,758-764
184. 2ftr BH0200 0.0741565
d2ftra1 Hypothetical protein BH0200
Dimeric alpha+beta barrel
Ferredoxin-like
A:5-16,30-38,41-49,58-67,69-79,96-106
185. 1why hypothetical protein RIKEN cDNA 1810017N16 0.0741070
d1whya_ Putative RNA-binding protein 15B, Rbm15b
RNA-binding domain, RBD
Ferredoxin-like
A:91-97,103-116,116-125,126-134,135-149,158-163
186. 2cyy Putative HTH-type transcriptional regulator P 0.0740741
d2cyya2 Putative transcriptional regulator PH1519
Dimeric alpha+beta barrel
Ferredoxin-like
A:66-76,76-91,92-99,104-112,113-127,129-138
187. 2cq4 RNA binding motif protein 23 0.0739426
d2cq4a1 RNA binding protein 23
RNA-binding domain, RBD
Ferredoxin-like
A:151-156,162-175,175-182,192-199,200-211,217-224
188. 2cpj Non-POU domain-containing octamer-binding pro 0.0738334
d2cpja1 Non-POU domain-containing octamer-binding protein, NonO
RNA-binding domain, RBD
Ferredoxin-like
A:73-79,85-97,99-107,108-115,117-130,135-143
189. 2f06 conserved hypothetical protein 0.0738334
d2f06a1 Hypothetical protein BT0572
ACT-like
Ferredoxin-like
A:71-78,79-94,96-105,107-116,117-129,131-133
190. 1fno PEPTIDASE T 0.0735943
d1fnoa3 Peptidase T (tripeptidase)
Bacterial exopeptidase dimerisation domain
Ferredoxin-like
A:208-219,233-246,259-269,271-282,283-303,309-319
191. 2atz H. pylori predicted coding region HP0184 0.0735510
d2atza1 Hypothetical protein HP0184
Prim-pol domain
Prim-pol domain
A:73-80,82-98,100-107,111-118,123-143,145-150
192. 2ghp U4/U6 snRNA-associated splicing factor PRP24 0.0735024
d2ghpa2 U4/U6 snRNA-associated-splicing factor PRP24
RNA-binding domain, RBD
Ferredoxin-like
A:41-49,53-65,66-75,80-88,89-100,106-114
193. 1f60 ELONGATION FACTOR EEF1BA 0.0734484
d1f60b_ Guanine nucleotide exchange factor (GEF) domain from elongation factor-1 beta
eEF-1beta-like
Ferredoxin-like
B:1119-1130,1135-1147,1150-1162,1164-1176,1180-1192,1194-1206
194. 1cli PROTEIN (PHOSPHORIBOSYL-AMINOIMIDAZOLE SYNTHE 0.0734376
d1clia2 Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain
PurM C-terminal domain-like
PurM C-terminal domain-like
A:177-186,228-241,242-248,301-309,309-324,326-336
195. 1wf2 Heterogeneous nuclear ribonucleoproteins C1/C 0.0734053
d1wf2a_ Heterogeneous nuclear ribonucleoproteins C1/C2
RNA-binding domain, RBD
Ferredoxin-like
A:16-22,29-41,42-50,51-58,59-73,80-85
196. 1tdj BIOSYNTHETIC THREONINE DEAMINASE 0.0733837
d1tdja2 Allosteric threonine deaminase C-terminal domain
ACT-like
Ferredoxin-like
A:337-346,347-351,363-369,376-385,387-403,403-408
197. 2cq3 RNA-binding protein 9 0.0732601
d2cq3a1 RNA-binding protein 9
RNA-binding domain, RBD
Ferredoxin-like
A:119-127,129-133,146-154,161-169,169-183,190-195
198. 1x4c Splicing factor, arginine/serine-rich 1 0.0732279
d1x4ca1 Splicing factor, arginine/serine-rich 1, SFRS1
RNA-binding domain, RBD
Ferredoxin-like
A:16-22,28-40,41-49,51-58,59-71,80-90
199. 1vqs hypothetical protein AGR_L_1239 0.0727855
d1vqsa_ Hypothetical protein Atu4242
Dimeric alpha+beta barrel
Ferredoxin-like
A:1-11,11-26,36-43,49-58,59-74,86-96
200. 1t94 polymerase (DNA directed) kappa 0.0727484
d1t94a2 DNA polymerase kappa
DNA/RNA polymerases
DNA/RNA polymerases
A:102-109,170-190,192-196,198-204,289-306,308-315
201. 1x4e RNA binding motif, single-stranded interactin 0.0727220
d1x4ea1 RNA-binding motif, single-stranded-interacting protein 2, RBMS2
RNA-binding domain, RBD
Ferredoxin-like
A:8-12,18-27,31-38,48-55,56-71,73-76
202. 1lxn HYPOTHETICAL PROTEIN MTH1187 0.0727061
d1lxna_ Hypothetical protein MTH1187
MTH1187/YkoF-like
Ferredoxin-like
A:1-11,17-33,34-40,41-48,49-68,71-80
203. 1hr6 MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBU 0.0726322
d1hr6a1 Mitochondrial processing peptidase (MPP) alpha chain
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:39-50,76-88,90-97,98-107,107-125,199-206
204. 1jjc PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN 0.0722857
d1jjcb6 B3/B4 domain of PheRS, PheT
PheT/TilS domain
PheT/TilS domain
B:212-220,243-257,260-265,329-337,365-385,387-390
205. 1jl0 S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 0.0722700
d1jl0a_ S-adenosylmethionine decarboxylase
S-adenosylmethionine decarboxylase
S-adenosylmethionine decarboxylase
A:11-20,31-36,67-74,75-82,86-103,105-116
206. 2cpi CCR4-NOT transcription complex subunit 4 0.0722335
d2cpia1 E3 ubiquitin protein ligase CNOT4
RNA-binding domain, RBD
Ferredoxin-like
A:110-115,122-129,138-145,157-163,165-179,186-189
207. 1pj5 N,N-dimethylglycine oxidase 0.0720877
d1pj5a4 N,N-dimethylglycine oxidase domain 3
Folate-binding domain
Folate-binding domain
A:509-516,516-527,547-559,561-567,569-587,591-598
208. 2cfx HTH-TYPE TRANSCRIPTIONAL REGULATOR LRPC 0.0719528
d2cfxa2 Transcriptional regulator LrpC
Dimeric alpha+beta barrel
Ferredoxin-like
A:64-74,77-88,90-97,102-110,111-126,125-133
209. 1whv poly(A)-specific ribonuclease 0.0719424
d1whva_ Poly(A)-specific ribonuclease PARN
RNA-binding domain, RBD
Ferredoxin-like
A:439-447,450-462,464-470,471-478,480-495,497-501
210. 1vr7 S-adenosylmethionine decarboxylase proenzyme 0.0718649
d1vr7a1 S-adenosylmethionine decarboxylase (SamDC, SpeH)
S-adenosylmethionine decarboxylase
S-adenosylmethionine decarboxylase
A:4-14,22-38,62-72,73-84,84-88,103-113
211. 1r7i 3-hydroxy-3-methylglutaryl-coenzyme A reducta 0.0718030
d1r7ia1 NAD-binding domain of HMG-CoA reductase
NAD-binding domain of HMG-CoA reductase
Ferredoxin-like
A:111-120,123-135,154-168,169-181,186-198,207-215
212. 2fiu conserved hypothetical protein 0.0716178
d2fiua1 Hypothetical protein Atu0297
Dimeric alpha+beta barrel
Ferredoxin-like
A:2-13,25-33,33-40,52-61,71-85,84-95
213. 1nm2 malonyl CoA:acyl carrier protein malonyltrans 0.0714745
d1nm2a2 Probable ACP-binding domain of malonyl-CoA ACP transacylase
Probable ACP-binding domain of malonyl-CoA ACP transacylase
Ferredoxin-like
A:135-142,144-156,157-164,166-173,173-184,189-194
214. 1hbn METHYL-COENZYME M REDUCTASE I BETA SUBUNIT 0.0714082
d1hbnb2 Beta chain
Methyl-coenzyme M reductase subunits
Ferredoxin-like
B:45-49,81-95,100-107,110-117,126-147,174-177
215. 1t3t Phosphoribosylformylglycinamidine synthase 0.0708516
d1t3ta6 FGAM synthase PurL, PurM-like module, C1 and C2 domains
PurM C-terminal domain-like
PurM C-terminal domain-like
A:434-440,474-492,497-503,549-556,556-571,573-582
216. 1ulr putative acylphosphatase 0.0707514
d1ulra_ Acylphosphatase
Acylphosphatase/BLUF domain-like
Ferredoxin-like
A:2-11,16-29,30-38,40-48,64-68,67-78
217. 1r3e tRNA pseudouridine synthase B 0.0707314
d1r3ea2 Pseudouridine synthase II TruB
Pseudouridine synthase
Pseudouridine synthase
A:72-83,104-118,160-165,166-176,179-192,194-206
218. 2cpd APOBEC-1 stimulating protein 0.0706115
d2cpda1 APOBEC1 stimulating protein
RNA-binding domain, RBD
Ferredoxin-like
A:231-237,243-256,258-266,267-274,275-288,293-301
219. 1uw4 UPF3X 0.0704622
d1uw4a_ RNA processing protein UPF3x, RRM domain
RNA-binding domain, RBD
Ferredoxin-like
A:51-60,63-72,76-84,93-102,103-115,124-134
220. 1whw hypothetical protein RIKEN CDNA 1200009A02 0.0704523
d1whwa_ Probable RNA-binding protein 19, Rbm19
RNA-binding domain, RBD
Ferredoxin-like
A:38-44,50-62,63-69,80-87,88-102,106-114
221. 1y0h hypothetical protein Rv0793 0.0703235
d1y0ha_ Hypothetical protein Rv0793
Dimeric alpha+beta barrel
Ferredoxin-like
A:4-13,18-36,38-47,52-61,71-85,89-95
222. 1wey calcipressin 1 0.0702346
d1weya_ Calcipressin-1
RNA-binding domain, RBD
Ferredoxin-like
A:6-12,21-33,37-45,46-54,55-67,76-81
223. 1v5v aminomethyltransferase 0.0701557
d1v5va2 Glycine cleavage system T protein, GcvT
Folate-binding domain
Folate-binding domain
A:54-63,63-74,95-107,109-117,119-139,141-148
224. 2cq0 Eukaryotic translation initiation factor 3 su 0.0697788
d2cq0a1 Eukaryotic translation initiation factor 3 subunit 4
RNA-binding domain, RBD
Ferredoxin-like
A:239-245,251-263,265-271,281-287,289-303,310-315
225. 1l3k HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1 0.0694589
d1l3ka2 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
RNA-binding domain, RBD
Ferredoxin-like
A:105-111,117-129,130-137,147-154,155-166,175-180
226. 2cq0 Eukaryotic translation initiation factor 3 su 0.0692569
d2cq0a1 Eukaryotic translation initiation factor 3 subunit 4
RNA-binding domain, RBD
Ferredoxin-like
A:239-245,247-251,265-271,281-287,289-303,310-315
227. 1q5y Nickel responsive regulator 0.0692569
d1q5ya_ Nickel responsive regulator NikR, C-terminal domain
ACT-like
Ferredoxin-like
A:51-62,64-79,81-91,93-104,104-118,121-131
228. 2cpf RNA binding motif protein 19 0.0692281
d2cpfa1 Probable RNA-binding protein 19, Rbm19
RNA-binding domain, RBD
Ferredoxin-like
A:362-366,368-372,385-392,405-412,413-427,434-438
229. 2cph RNA binding motif protein 19 0.0691898
d2cpha1 Probable RNA-binding protein 19, Rbm19
RNA-binding domain, RBD
Ferredoxin-like
A:463-468,470-474,487-493,505-512,513-528,535-540
230. 1x4h RNA-binding protein 28 0.0690512
d1x4ha1 RNA-binding protein 28
RNA-binding domain, RBD
Ferredoxin-like
A:16-22,24-28,41-48,58-65,66-79,93-98
231. 1t95 Hypothetical protein AF0491 0.0690084
d1t95a3 Hypothetical protein AF0491, C-terminal domain
EF-G C-terminal domain-like
Ferredoxin-like
A:168-178,180-192,193-201,203-213,212-228,231-234
232. 2hiq Hypothetical protein ydhR 0.0688990
d2hiqa1 Hypothetical protein YdhR
Dimeric alpha+beta barrel
Ferredoxin-like
A:9-18,22-31,42-53,54-64,65-84,88-95
233. 1vmb 30S ribosomal protein S6 0.0688800
d1vmba_ Ribosomal protein S6
Ribosomal protein S6
Ferredoxin-like
A:6-17,20-40,41-54,62-74,74-78,90-99
234. 1ppj Ubiquinol-cytochrome C reductase complex core 0.0686860
d1ppja2 Cytochrome bc1 core subunit 1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:250-262,292-302,304-312,316-327,327-349,420-427
235. 1vi7 Hypothetical protein yigZ 0.0685401
d1vi7a2 Hypothetical protein YigZ, C-terminal domain
EF-G C-terminal domain-like
Ferredoxin-like
A:139-147,147-162,163-171,173-181,181-197,202-205
236. 2j0w LYSINE-SENSITIVE ASPARTOKINASE 3 0.0683527
d2j0wa2 Aspartokinase
ACT-like
Ferredoxin-like
A:307-315,320-336,341-346,347-355,367-379,378-385
237. 1vqs hypothetical protein AGR_L_1239 0.0683480
d1vqsa_ Hypothetical protein Atu4242
Dimeric alpha+beta barrel
Ferredoxin-like
A:1-11,11-26,36-43,49-58,73-84,86-96
238. 1wex HYPOTHETICAL PROTEIN (RIKEN CDNA 2810036L13) 0.0683340
d1wexa_ Heterogeneous nuclear ribonucleoprotein L-like
RNA-binding domain, RBD
Ferredoxin-like
A:16-22,28-40,41-50,51-59,60-75,83-88
239. 1q8b Protein yjcS 0.0678702
d1q8ba_ Hypothetical protein YjcS
Dimeric alpha+beta barrel
Ferredoxin-like
A:12-23,27-46,47-56,61-70,71-82,92-104
240. 2bop PROTEIN (E2) 0.0678656
d2bopa_ Papillomavirus-1 E2 protein
Viral DNA-binding domain
Ferredoxin-like
A:326-333,349-354,353-361,374-380,382-394,399-406
241. 1jih DNA Polymerase ETA 0.0677553
d1jiha2 DNA polymerase eta
DNA/RNA polymerases
DNA/RNA polymerases
A:25-31,127-147,148-153,155-161,232-257,260-266
242. 2f9d Pre-mRNA branch site protein p14 0.0675813
d2f9da1 Pre-mRNA branch site protein p14
RNA-binding domain, RBD
Ferredoxin-like
A:19-25,31-43,44-51,58-65,66-78,84-92
243. 1cvj POLYDENYLATE BINDING PROTEIN 1 0.0675493
d1cvja2 Poly(A)-binding protein
RNA-binding domain, RBD
Ferredoxin-like
A:99-105,111-123,124-131,139-146,147-159,168-173
244. 1sgv tRNA pseudouridine synthase B 0.0675265
d1sgva2 Pseudouridine synthase II TruB
Pseudouridine synthase
Pseudouridine synthase
A:67-77,99-112,149-162,163-174,178-191,193-205
245. 1hbn METHYL-COENZYME M REDUCTASE I ALPHA SUBUNIT 0.0674900
d1hbna2 Alpha chain
Methyl-coenzyme M reductase subunits
Ferredoxin-like
A:104-109,125-142,160-167,204-211,219-240,259-262
246. 2cqi Nucleolysin TIAR 0.0673854
d2cqia1 Nucleolysin TIAR
RNA-binding domain, RBD
Ferredoxin-like
A:9-15,21-34,34-42,49-56,57-69,75-83
247. 1lou RIBOSOMAL PROTEIN S6 0.0672721
d1loua_ Ribosomal protein S6
Ribosomal protein S6
Ferredoxin-like
A:1-11,15-34,35-44,56-68,68-83,84-93
248. 2ghp U4/U6 snRNA-associated splicing factor PRP24 0.0672359
d2ghpa3 U4/U6 snRNA-associated-splicing factor PRP24
RNA-binding domain, RBD
Ferredoxin-like
A:210-216,223-235,236-242,254-261,262-274,279-287
249. 2b4v RNA editing complex protein MP57 0.0672269
d2b4va2 RNA editing terminal uridyl transferase 2, TUTase 2, RET2
Nucleotidyltransferase
Nucleotidyltransferase
A:176-183,187-199,202-211,213-222,223-236,247-253
250. 1sgv tRNA pseudouridine synthase B 0.0671817
d1sgva2 Pseudouridine synthase II TruB
Pseudouridine synthase
Pseudouridine synthase
A:67-77,99-112,149-162,163-174,175-179,193-205
251. 1u7l Vacuolar ATP synthase subunit C 0.0671637
d1u7la_ Vacuolar ATP synthase subunit C
Vacuolar ATP synthase subunit C
Vacuolar ATP synthase subunit C
A:9-18,29-38,43-48,324-332,348-353,386-392
252. 1x7v PA3566 protein 0.0668762
d1x7va_ Hypothetical protein PA3566
Dimeric alpha+beta barrel
Ferredoxin-like
A:4-14,17-35,37-46,51-60,61-71,84-94
253. 1lfw pepV 0.0668271
d1lfwa2 Aminopeptidase PepV
Bacterial exopeptidase dimerisation domain
Ferredoxin-like
A:187-197,293-308,327-339,340-352,356-369,379-382
254. 1hbn METHYL-COENZYME M REDUCTASE I GAMMA SUBUNIT 0.0668137
d1hbnc_ Methyl-coenzyme M reductase gamma chain
Methyl-coenzyme M reductase subunits
Ferredoxin-like
C:82-90,97-109,112-118,119-126,126-141,147-151
255. 1ykw RuBisCO-like protein 0.0667646
d1ykwa2 Ribulose 1,5-bisphosphate carboxylase-oxygenase
RuBisCO, large subunit, small (N-terminal) domain
Ferredoxin-like
A:20-32,33-47,65-76,90-102,118-124,126-137
256. 1jj2 RIBOSOMAL PROTEIN L5 0.0663086
d1jj2d_ Ribosomal protein L5
Ribosomal protein L5
Ribosomal protein L5
D:16-27,35-46,49-54,67-76,84-92,128-136
257. 2a6o ISHp608 Transposase 0.0662778
d2a6oa1 ISHP608 transposase
Transposase IS200-like
Ferredoxin-like
A:17-25,33-52,53-62,63-71,76-97,111-116
258. 1oy8 Acriflavine resistance protein B 0.0662559
d1oy8a1 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Ferredoxin-like
A:40-49,53-70,74-84,86-95,99-115,126-132
259. 1sjr Polypyrimidine tract-binding protein 1 0.0662164
d1sjra_ Polypyrimidine tract-binding protein
RNA-binding domain, RBD
Ferredoxin-like
A:45-53,59-72,72-82,83-92,93-105,114-121
260. 1x4a splicing factor, arginine/serine-rich 1 (spli 0.0661463
d1x4aa1 Splicing factor, arginine/serine-rich 1, SFRS1
RNA-binding domain, RBD
Ferredoxin-like
A:23-29,35-47,48-56,62-69,70-83,88-95
261. 1ftr FORMYLMETHANOFURAN:TETRAHYDROMETHANOPTERIN FO 0.0659935
d1ftra1 Formylmethanofuran:tetrahydromethanopterin formyltransferase
Formylmethanofuran:tetrahydromethanopterin formyltransferase
Ferredoxin-like
A:18-28,29-42,52-57,69-80,81-101,102-108
262. 1wdd Ribulose bisphosphate carboxylase large chain 0.0659761
d1wdda2 Ribulose 1,5-bisphosphate carboxylase-oxygenase
RuBisCO, large subunit, small (N-terminal) domain
Ferredoxin-like
A:34-45,49-64,82-90,96-105,121-127,129-140
263. 1iuj hypothetical protein TT1380 0.0659152
d1iuja_ Hypothetical protein TT1380
Dimeric alpha+beta barrel
Ferredoxin-like
A:1-9,11-26,34-43,49-57,58-68,90-97
264. 1fxl PARANEOPLASTIC ENCEPHALOMYELITIS ANTIGEN HUD 0.0657635
d1fxla2 Hu antigen D (Hud)
RNA-binding domain, RBD
Ferredoxin-like
A:125-131,137-149,150-157,167-174,175-187,197-203
265. 1pie Galactokinase 0.0657289
d1piea2 Galactokinase
GHMP Kinase, C-terminal domain
Ferredoxin-like
A:214-222,324-338,339-346,352-360,360-379,382-387
266. 1l5i Rep protein 0.0656858
d1l5ia_ DNA-binding domain of REP protein
Origin of replication-binding domain, RBD-like
Origin of replication-binding domain, RBD-like
A:12-20,24-36,39-52,54-66,72-77,89-94
267. 1s7i hypothetical protein PA1349 0.0655781
d1s7ia_ Hypothetical protein PA1349
Dimeric alpha+beta barrel
Ferredoxin-like
A:7-16,24-46,47-54,82-92,105-111,111-118
268. 1kwm Procarboxypeptidase B 0.0655308
d1kwma2 Procarboxypeptidase B
Protease propeptides/inhibitors
Ferredoxin-like
A:9A-19A,19A-34A,35A-39A,48A-58A,57A-72A,74A-81A
269. 1fx2 RECEPTOR-TYPE ADENYLATE CYCLASE GRESAG 4.1 0.0655008
d1fx2a_ Receptor-type monomeric adenylyl cyclase
Nucleotide cyclase
Ferredoxin-like
A:899-908,917-940,941-948,949-956,957-975,1020-1029
270. 1lq9 ACTVA-ORF6 MONOOXYGENASE 0.0654108
d1lq9a_ Actinorhodin biosynthesis monooxygenase ActVa-Orf6
Dimeric alpha+beta barrel
Ferredoxin-like
A:10-21,37-43,45-54,57-67,79-92,99-105
271. 2dya Nucleoside diphosphate kinase 0.0651593
d2dyaa1 Nucleoside diphosphate kinase, NDK
Nucleoside diphosphate kinase, NDK
Ferredoxin-like
A:7-15,22-35,36-45,75-84,106-112,122-126
272. 1pg5 Aspartate carbamoyltransferase regulatory cha 0.0650111
d1pg5b1 Aspartate carbamoyltransferase
Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
Ferredoxin-like
B:16-26,25-37,45-54,58-67,71-83,85-92
273. 1lq9 ACTVA-ORF6 MONOOXYGENASE 0.0649942
d1lq9a_ Actinorhodin biosynthesis monooxygenase ActVa-Orf6
Dimeric alpha+beta barrel
Ferredoxin-like
A:10-21,21-35,45-54,57-67,79-92,99-105
274. 2adc Polypyrimidine tract-binding protein 1 0.0646956
d2adca2 Polypyrimidine tract-binding protein
RNA-binding domain, RBD
Ferredoxin-like
A:454-460,466-478,480-487,492-499,500-512,519-527
275. 1cvj POLYDENYLATE BINDING PROTEIN 1 0.0646789
d1cvja1 Poly(A)-binding protein
RNA-binding domain, RBD
Ferredoxin-like
A:11-17,23-35,36-43,53-60,61-73,82-87
276. 1osd hypothetical protein MerP 0.0646204
d1osda_ Mercuric ion binding protein MerP
HMA, heavy metal-associated domain
Ferredoxin-like
A:1-9,14-29,30-39,40-49,53-65,68-71
277. 1kb9 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE 0.0645953
d1kb9a2 Cytochrome bc1 core subunit 1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:258-266,300-310,312-320,325-335,339-358,431-438
278. 1t1e kumamolisin 0.0645578
d1t1ea2 Pro-kumamolisin activation domain
Protease propeptides/inhibitors
Ferredoxin-like
A:39-47,84-99,100-108,109-117,149-156,155-161
279. 1r7i 3-hydroxy-3-methylglutaryl-coenzyme A reducta 0.0645078
d1r7ia1 NAD-binding domain of HMG-CoA reductase
NAD-binding domain of HMG-CoA reductase
Ferredoxin-like
A:111-120,134-147,154-168,169-181,197-206,207-215
280. 1q8i DNA polymerase II 0.0644870
d1q8ia2 Family B DNA polymerase
DNA/RNA polymerases
DNA/RNA polymerases
A:413-421,512-538,539-546,547-553,558-585,591-600
281. 1ftr FORMYLMETHANOFURAN:TETRAHYDROMETHANOPTERIN FO 0.0644538
d1ftra1 Formylmethanofuran:tetrahydromethanopterin formyltransferase
Formylmethanofuran:tetrahydromethanopterin formyltransferase
Ferredoxin-like
A:18-28,41-45,52-57,69-80,81-101,102-108
282. 1nh8 ATP Phosphoribosyltransferase 0.0643459
d1nh8a2 ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain
GlnB-like
Ferredoxin-like
A:211-221,223-232,237-242,246-256,255-270,271-278
283. 1f08 REPLICATION PROTEIN E1 0.0642220
d1f08a_ Replication initiation protein E1
Origin of replication-binding domain, RBD-like
Origin of replication-binding domain, RBD-like
A:190-198,200-215,214-226,227-238,242-255,260-265
284. 2dit HIV TAT specific factor 1 variant 0.0641890
d2dita1 HIV Tat-specific factor 1
RNA-binding domain, RBD
Ferredoxin-like
A:16-22,32-51,54-59,65-71,73-87,91-99
285. 1h3d ATP-PHOSPHORIBOSYLTRANSFERASE 0.0641026
d1h3da2 ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain
GlnB-like
Ferredoxin-like
A:225-232,237-246,251-254,264-271,274-285,289-293
286. 2cqb Peptidyl-prolyl cis-trans isomerase E 0.0640861
d2cqba1 Peptidyl-prolyl cis-trans isomerase E, N-terminal domain
RNA-binding domain, RBD
Ferredoxin-like
A:6-12,18-30,31-37,48-55,56-68,74-82
287. 2cqg TAR DNA-binding protein-43 0.0640574
d2cqga1 TAR DNA-binding protein 43, TDP-43
RNA-binding domain, RBD
Ferredoxin-like
A:106-110,112-116,129-136,146-153,154-165,170-177
288. 1tgo PROTEIN (THERMOSTABLE B DNA POLYMERASE) 0.0640000
d1tgoa2 Family B DNA polymerase
DNA/RNA polymerases
DNA/RNA polymerases
A:398-406,506-533,534-541,542-548,552-571,576-584
289. 1r8h Regulatory protein E2 0.0639918
d1r8ha_ Papillomavirus-1 E2 protein
Viral DNA-binding domain
Ferredoxin-like
A:282-291,306-311,310-318,329-335,337-348,354-363
290. 1oy8 Acriflavine resistance protein B 0.0639918
d1oy8a4 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Ferredoxin-like
A:678-687,691-710,713-719,821-832,836-851,854-859
291. 1n0u Elongation factor 2 0.0639632
d1n0ua5 Elongation factor 2 (eEF-2)
EF-G C-terminal domain-like
Ferredoxin-like
A:726-736,736-751,752-759,765-774,773-778,792-802
292. 2cpy RNA-binding protein 12 0.0638978
d2cpya1 RNA-binding protein 12
RNA-binding domain, RBD
Ferredoxin-like
A:544-550,556-565,573-577,586-592,594-605,611-620
293. 1wf2 Heterogeneous nuclear ribonucleoproteins C1/C 0.0638814
d1wf2a_ Heterogeneous nuclear ribonucleoproteins C1/C2
RNA-binding domain, RBD
Ferredoxin-like
A:16-22,24-29,42-50,51-58,59-73,80-85
294. 1fxl PARANEOPLASTIC ENCEPHALOMYELITIS ANTIGEN HUD 0.0637714
d1fxla1 Hu antigen D (Hud)
RNA-binding domain, RBD
Ferredoxin-like
A:39-45,51-63,64-71,81-88,89-101,107-115
295. 2p8i Putative dioxygenase 0.0636943
d2p8ia1 Putative dioxygenase BxeB0224
DOPA-like
Ferredoxin-like
A:9-18,22-38,41-49,56-64,64-68,82-90
296. 1whx hypothetical protein RIKEN CDNA 1200009A02 0.0636862
d1whxa_ Probable RNA-binding protein 19, Rbm19
RNA-binding domain, RBD
Ferredoxin-like
A:222-228,234-247,247-253,259-265,266-280,287-292
297. 1oo0 CG8781-PA 0.0635809
d1oo0b_ RNA-binding protein 8
RNA-binding domain, RBD
Ferredoxin-like
B:71-79,85-97,98-104,115-122,123-135,141-149
298. 2cq2 hypothetical protein LOC91801 0.0635284
d2cq2a1 Alkylation repair AlkB homolog 8, ALKBH8
RNA-binding domain, RBD
Ferredoxin-like
A:43-49,57-70,70-76,81-88,89-103,110-120
299. 1oy8 Acriflavine resistance protein B 0.0634679
d1oy8a2 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Ferredoxin-like
A:136-146,162-171,173-179,286-293,310-317,319-329
300. 1vk8 hypothetical protein TM0486 0.0633152
d1vk8a_ Hypothetical protein TM0486
MTH1187/YkoF-like
Ferredoxin-like
A:3-13,15-34,35-41,42-49,49-69,70-79
301. 2dpi DNA polymerase iota 0.0632911
d2dpia2 DNA polymerase iota
DNA/RNA polymerases
DNA/RNA polymerases
A:29-36,98-118,119-124,126-132,167-192,194-201
302. 1wwh nucleoporin 35 0.0632551
d1wwha1 Nucleoporin 35
RNA-binding domain, RBD
Ferredoxin-like
A:173-179,181-196,197-204,208-215,216-227,235-242
303. 1why hypothetical protein RIKEN cDNA 1810017N16 0.0632311
d1whya_ Putative RNA-binding protein 15B, Rbm15b
RNA-binding domain, RBD
Ferredoxin-like
A:91-97,99-103,116-125,126-134,135-149,158-163
304. 2gs5 Conserved hypothetical protein 0.0631872
d2gs5a1 Hypothetical protein DIP2367
VC0467-like
VC0467-like
A:87-95,99-104,105-109,112-117,121-129,128-136
305. 1rki hypothetical protein 0.0631353
d1rkia1 Hypothetical protein PAE0736
THUMP domain-like
THUMP domain
A:2-10,25-30,32-37,40-47,47-58,63-71
306. 1ivz hypothetical protein 1110008I14RIK 0.0630756
d1ivza_ SEA domain from the hypothetical protein homologous to mucin 16
SEA domain
Ferredoxin-like
A:10-22,34-56,60-71,78-89,95-108,122-128
307. 1fno PEPTIDASE T 0.0629247
d1fnoa3 Peptidase T (tripeptidase)
Bacterial exopeptidase dimerisation domain
Ferredoxin-like
A:208-219,250-254,259-269,271-282,283-303,309-319
308. 1oy8 Acriflavine resistance protein B 0.0628812
d1oy8a2 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Ferredoxin-like
A:136-146,162-171,173-179,286-293,298-306,319-329
309. 2d3q Decolorizing Peroxidase 0.0628615
d2d3qa1 Decolorizing peroxidase DyP
Dimeric alpha+beta barrel
Ferredoxin-like
A:22-32,33-49,65-72,118-126,127-143,145-156
310. 2f5g Transposase, putative 0.0628575
d2f5ga1 Putative transposase SSO1474
Transposase IS200-like
Ferredoxin-like
A:13-22,29-48,49-58,59-67,72-93,105-110
311. 1vk3 Phosphoribosylformylglycinamidine synthase II 0.0626213
d1vk3a3 Phosphoribosylformylglycinamidine synthase II, domains 2 and 4
PurM C-terminal domain-like
PurM C-terminal domain-like
A:171-180,211-229,232-237,283-290,290-305,307-316
312. 1wdt elongation factor G homolog 0.0624103
d1wdta5 Elongation factor G (EF-G)
EF-G C-terminal domain-like
Ferredoxin-like
A:382-390,397-410,412-419,420-428,429-444,446-451
313. 1oy8 Acriflavine resistance protein B 0.0623519
d1oy8a1 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Ferredoxin-like
A:40-49,53-70,74-84,86-95,114-119,126-132
314. 1kp6 PROTEIN (TOXIN) 0.0623092
d1kp6a_ Killer toxin KP6 alpha-subunit
Killer toxin KP6 alpha-subunit
Ferredoxin-like
A:13-22,34-40,42-47,48-54,57-69,70-77
315. 1u2c Dystroglycan 0.0622975
d1u2ca2 Dystroglycan, domain 2
Dystroglycan, domain 2
Dystroglycan, domain 2
A:185-195,201-217,223-228,252-263,281-289,291-301
316. 1yqh IG hypothetical 16092 0.0622937
d1yqha1 Hypothetical protein BC0424
MTH1187/YkoF-like
Ferredoxin-like
A:4-15,19-35,37-42,43-50,50-69,70-81
317. 1hhs P2 PROTEIN 0.0622161
d1hhsa_ dsRNA phage RNA-dependent RNA-polymerase
DNA/RNA polymerases
DNA/RNA polymerases
A:318-326,397-420,445-452,453-460,483-487,487-491
318. 1hw8 HMG-COA REDUCTASE 0.0621234
d1hw8a1 NAD-binding domain of HMG-CoA reductase
NAD-binding domain of HMG-CoA reductase
Ferredoxin-like
A:587-596,611-627,628-640,641-652,656-676,678-684
319. 1q2l Protease III 0.0621118
d1q2la1 Protease III
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:546-557,580-591,592-598,600-610,609-613,698-707
320. 1nza Divalent cation tolerance protein 0.0620732
d1nzaa_ Cut A1
GlnB-like
Ferredoxin-like
A:1-10,11-26,28-36,51-61,60-64,81-87
321. 2fge zinc metalloprotease (insulinase family) 0.0619310
d2fgea2 Presequence protease 1, PREP1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:811-820,828-852,852-855,864-875,876-887,967-974
322. 1x5u Splicing factor 3B subunit 4 (Spliceosome ass 0.0618123
d1x5ua1 Splicing factor 3B subunit 4
RNA-binding domain, RBD
Ferredoxin-like
A:16-22,28-40,41-47,58-65,66-79,84-92
323. 1f46 CELL DIVISION PROTEIN ZIPA 0.0616979
d1f46a_ Cell-division protein ZipA, C-terminal domain
Cell-division protein ZipA, C-terminal domain
TBP-like
A:8-17,24-36,57-64,80-89,93-113,114-119
324. 1qlt VANILLYL-ALCOHOL OXIDASE 0.0616903
d1qlta1 Vanillyl-alcohol oxidase
FAD-linked oxidases, C-terminal domain
Ferredoxin-like
A:275-284,285-303,308-313,350-359,360-379,380-385
325. 2cqd RNA-binding region containing protein 1 0.0615082
d2cqda1 RNA-binding region containing protein 1
RNA-binding domain, RBD
Ferredoxin-like
A:11-17,23-35,36-43,53-60,61-72,78-86
326. 1wj9 CRISPR-associated protein 0.0615044
d1wj9a1 Hypothetical protein TTHB192
CRISPR-associated protein
Ferredoxin-like
A:1-9,12-22,43-49,56-64,68-73,76-85
327. 1hr6 MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBU 0.0613874
d1hr6a2 Mitochondrial processing peptidase (MPP) alpha chain
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:256-268,306-311,312-321,324-336,337-358,442-448
328. 2q43 IAA-amino acid hydrolase ILR1-like 2 0.0613798
d2q43a2 IAA-amino acid hydrolase
Bacterial exopeptidase dimerisation domain
Ferredoxin-like
A:195-206,217-236,243-253,263-274,276-296,297-304
329. 1rki hypothetical protein 0.0613008
d1rkia1 Hypothetical protein PAE0736
THUMP domain-like
THUMP domain
A:2-10,13-26,32-37,40-47,57-64,63-71
330. 1y0h hypothetical protein Rv0793 0.0612670
d1y0ha_ Hypothetical protein Rv0793
Dimeric alpha+beta barrel
Ferredoxin-like
A:4-13,18-36,38-47,52-61,61-71,89-95
331. 1wel RNA-binding protein 12 0.0611958
d1wela1 RNA-binding protein 12
RNA-binding domain, RBD
Ferredoxin-like
A:430-436,442-451,459-463,472-478,480-491,497-505
332. 1wey calcipressin 1 0.0611808
d1weya_ Calcipressin-1
RNA-binding domain, RBD
Ferredoxin-like
A:6-12,32-36,37-45,46-54,55-67,76-81
333. 5rub RUBISCO (RIBULOSE-1,5-BISPHOSPHATE CARBOXYLAS 0.0611060
d5ruba2 Ribulose 1,5-bisphosphate carboxylase-oxygenase
RuBisCO, large subunit, small (N-terminal) domain
Ferredoxin-like
A:22-33,37-51,69-77,78-87,109-115,117-128
334. 2adc Polypyrimidine tract-binding protein 1 0.0610762
d2adca1 Polypyrimidine tract-binding protein
RNA-binding domain, RBD
Ferredoxin-like
A:337-343,350-363,363-370,375-382,383-395,403-409
335. 2cg4 REGULATORY PROTEIN ASNC 0.0610240
d2cg4a2 Regulatory protein AsnC
Dimeric alpha+beta barrel
Ferredoxin-like
A:67-76,81-93,94-100,106-114,130-134,133-141
336. 2fiu conserved hypothetical protein 0.0609422
d2fiua1 Hypothetical protein Atu0297
Dimeric alpha+beta barrel
Ferredoxin-like
A:2-13,25-33,33-40,52-61,61-71,84-95
337. 1aye PROCARBOXYPEPTIDASE A2 0.0609236
d1ayea2 Procarboxypeptidase A
Protease propeptides/inhibitors
Ferredoxin-like
A:9A-17A,32A-34C,35A-40A,50A-58A,57A-72A,73A-81A
338. 1fjc NUCLEOLIN RBD2 0.0608939
d1fjca_ Nucleolin
RNA-binding domain, RBD
Ferredoxin-like
A:17-23,29-38,41-48,53-60,62-74,83-88
339. 1wf0 TAR DNA-binding protein-43 0.0607755
d1wf0a_ TAR DNA-binding protein 43, TDP-43
RNA-binding domain, RBD
Ferredoxin-like
A:6-12,18-30,31-37,43-50,51-61,67-74
340. 1azs IIC2 0.0607644
d1azsb_ Adenylyl cyclase IIC1, domain C2a
Nucleotide cyclase
Ferredoxin-like
B:883-892,907-929,934-941,942-949,964-991,996-1004
341. 1ufw Synaptojanin 2 0.0607128
d1ufwa_ Synaptojanin 2
RNA-binding domain, RBD
Ferredoxin-like
A:16-23,34-50,50-58,59-66,67-78,84-91
342. 1wey calcipressin 1 0.0605987
d1weya_ Calcipressin-1
RNA-binding domain, RBD
Ferredoxin-like
A:6-12,14-20,37-45,46-54,55-67,76-81
343. 1wdt elongation factor G homolog 0.0605254
d1wdta4 Elongation factor G (EF-G)
EF-G C-terminal domain-like
Ferredoxin-like
A:571-584,583-598,599-608,609-618,624-634,637-649
344. 1wvf 4-cresol dehydrogenase [hydroxylating] flavop 0.0604595
d1wvfa1 Flavoprotein subunit of p-cresol methylhydroxylase
FAD-linked oxidases, C-terminal domain
Ferredoxin-like
A:244-253,254-272,277-282,320-329,330-349,351-355
345. 1l3k HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1 0.0604266
d1l3ka1 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
RNA-binding domain, RBD
Ferredoxin-like
A:15-20,22-26,39-46,56-63,64-75,84-89
346. 1mml MMLV REVERSE TRANSCRIPTASE 0.0604193
d1mmla_ MMLV reverse transcriptase
DNA/RNA polymerases
DNA/RNA polymerases
A:144-152,207-215,217-223,224-231,232-251,259-262
347. 1jx4 DNA polymerase IV (family Y) 0.0603938
d1jx4a2 DinB homolog (DBH)
DNA/RNA polymerases
DNA/RNA polymerases
A:1-9,77-93,98-103,105-112,117-137,139-146
348. 1w1o CYTOKININ DEHYDROGENASE 1 0.0603282
d1w1oa1 Cytokinin dehydrogenase 1
FAD-linked oxidases, C-terminal domain
Ferredoxin-like
A:394-404,404-420,425-435,450-461,465-485,487-491
349. 1x7v PA3566 protein 0.0603245
d1x7va_ Hypothetical protein PA3566
Dimeric alpha+beta barrel
Ferredoxin-like
A:4-14,17-35,37-46,51-60,71-81,84-94
350. 1wjw Phosphoacetylglucosamine mutase 0.0602228
d1wjwa_ Phosphoacetylglucosamine mutase
Phosphoglucomutase, C-terminal domain
TBP-like
A:14-22,40-55,56-64,69-77,78-98,100-102
351. 1hr6 MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBU 0.0600781
d1hr6a2 Mitochondrial processing peptidase (MPP) alpha chain
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:256-268,300-307,312-321,324-336,337-358,442-448
352. 2ghp U4/U6 snRNA-associated splicing factor PRP24 0.0599772
d2ghpa1 U4/U6 snRNA-associated-splicing factor PRP24
RNA-binding domain, RBD
Ferredoxin-like
A:117-123,129-141,143-149,160-166,167-179,185-193
353. 2gya 50S ribosomal protein L16 0.0599053
d2gyak1 Ribosomal protein L16p
Ribosomal protein L16p/L10e
alpha/beta-Hammerhead
K:31-37,42-58,62-66,97-106,111-125,127-131
354. 1oj4 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KI 0.0599053
d1oj4a2 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE
GHMP Kinase, C-terminal domain
Ferredoxin-like
A:167-175,219-233,234-238,243-249,250-261,265-273
355. 1s4e Galactokinase 0.0598767
d1s4ea2 Galactokinase
GHMP Kinase, C-terminal domain
Ferredoxin-like
A:181-190,282-296,297-303,309-317,316-336,338-344
356. 1ppj Ubiquinol-cytochrome C reductase complex core 0.0598301
d1ppjb1 Cytochrome bc1 core subunit 2
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
B:43-53,64-73,94-102,103-113,112-116,203-210
357. 1kb9 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE 0.0597550
d1kb9b2 Cytochrome bc1 core subunit 2
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
B:236-246,246-262,271-280,281-292,293-311,351-357
358. 1lq9 ACTVA-ORF6 MONOOXYGENASE 0.0597158
d1lq9a_ Actinorhodin biosynthesis monooxygenase ActVa-Orf6
Dimeric alpha+beta barrel
Ferredoxin-like
A:10-21,21-35,45-54,57-67,68-80,99-105
359. 1nu4 U1A RNA binding domain 0.0595309
d1nu4a_ Splicesomal U1A protein
RNA-binding domain, RBD
Ferredoxin-like
A:10-16,22-38,39-45,53-60,61-73,79-87
360. 1qd1 FORMIMINOTRANSFERASE-CYCLODEAMINASE 0.0595309
d1qd1a1 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
Formiminotransferase domain of formiminotransferase-cyclodeaminase.
Ferredoxin-like
A:3-13,16-31,33-42,45-54,54-74,87-98
361. 2cpz CUG triplet repeat RNA-binding protein 1 0.0594212
d2cpza1 CUG triplet repeat RNA-binding protein 1
RNA-binding domain, RBD
Ferredoxin-like
A:401-407,413-425,427-433,443-449,451-464,469-477
362. 1rwu Hypothetical UPF0250 protein ybeD 0.0593895
d1rwua_ Hypothetical protein ybeD
YbeD-like
Ferredoxin-like
A:10-23,24-40,44-49,54-66,66-80,83-87
363. 2fyx transposase, putative 0.0592839
d2fyxa1 Putative transposase DR0177
Transposase IS200-like
Ferredoxin-like
A:11-20,27-46,47-56,57-65,70-91,107-111
364. 2cqh IGF-II mRNA-binding protein 2 isoform a 0.0592698
d2cqha1 IGF-II mRNA-binding protein 2 isoform A
RNA-binding domain, RBD
Ferredoxin-like
A:4-9,15-27,33-38,39-44,47-63,69-74
365. 2fgc acetolactate synthase, small subunit 0.0591506
d2fgca1 Acetolactate synthase small subunit, IlvH
ACT-like
Ferredoxin-like
A:109-122,125-137,138-144,146-155,155-167,170-184
366. 1ppj Ubiquinol-cytochrome C reductase complex core 0.0590702
d1ppjb1 Cytochrome bc1 core subunit 2
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
B:43-53,81-93,94-102,103-113,112-116,203-210
367. 1ppj Ubiquinol-cytochrome C reductase complex core 0.0590284
d1ppjb2 Cytochrome bc1 core subunit 2
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
B:251-264,266-280,307-315,318-330,329-350,422-428
368. 1lq9 ACTVA-ORF6 MONOOXYGENASE 0.0588859
d1lq9a_ Actinorhodin biosynthesis monooxygenase ActVa-Orf6
Dimeric alpha+beta barrel
Ferredoxin-like
A:10-21,37-43,45-54,57-67,68-80,99-105
369. 1r7i 3-hydroxy-3-methylglutaryl-coenzyme A reducta 0.0588512
d1r7ia1 NAD-binding domain of HMG-CoA reductase
NAD-binding domain of HMG-CoA reductase
Ferredoxin-like
A:111-120,134-147,154-168,169-181,186-198,207-215
370. 1sqe hypothetical protein PG130 0.0588443
d1sqea_ Hypothetical protein PG130 (SAV0165)
Dimeric alpha+beta barrel
Ferredoxin-like
A:17-27,43-48,49-58,64-74,75-85,107-118
371. 1xsz guanine nucleotide exchange protein 0.0588374
d1xsza2 RalF, C-terminal domain
RalF, C-terminal domain
TBP-like
A:201-206,213-225,269-280,291-299,303-316,319-324
372. 1aye PROCARBOXYPEPTIDASE A2 0.0586648
d1ayea2 Procarboxypeptidase A
Protease propeptides/inhibitors
Ferredoxin-like
A:9A-17A,19A-33A,35A-40A,50A-58A,57A-72A,73A-81A
373. 2cqi Nucleolysin TIAR 0.0586029
d2cqia1 Nucleolysin TIAR
RNA-binding domain, RBD
Ferredoxin-like
A:9-15,17-21,34-42,49-56,57-69,75-83
374. 1f60 ELONGATION FACTOR EEF1BA 0.0584215
d1f60b_ Guanine nucleotide exchange factor (GEF) domain from elongation factor-1 beta
eEF-1beta-like
Ferredoxin-like
B:1119-1130,1135-1147,1150-1162,1164-1176,1176-1180,1194-1206
375. 1ixk Methyltransferase 0.0583533
d1ixka_ Hypothetical methyltransferase PH1374
S-adenosyl-L-methionine-dependent methyltransferases
S-adenosyl-L-methionine-dependent methyltransferases
A:45-50,55-67,67-73,78-86,92-98,99-103
376. 2cz4 hypothetical protein TTHA0516 0.0580821
d2cz4a1 Hypothetical protein TTHA0516
GlnB-like
Ferredoxin-like
A:2-15,14-29,33-39,54-63,63-79,84-95
377. 1zhv hypothetical protein Atu0741 0.0578838
d1zhva1 Hypothetical protein Atu0741
ACT-like
Ferredoxin-like
A:13-21,26-31,35-40,42-50,49-54,58-61
378. 1jj2 RIBOSOMAL PROTEIN L5 0.0578603
d1jj2d_ Ribosomal protein L5
Ribosomal protein L5
Ribosomal protein L5
D:16-27,35-46,49-54,67-76,76-85,128-136
379. 1zq1 Glutamyl-tRNA(Gln) amidotransferase subunit E 0.0577667
d1zq1c3 Glutamyl-tRNA(Gln) amidotransferase subunit E, GatE
Glutamine synthetase/guanido kinase
Glutamine synthetase/guanido kinase
C:14-25,97-112,151-166,182-194,198-217,225-235
380. 3pmg ALPHA-D-GLUCOSE-1,6-BISPHOSPHATE 0.0577434
d3pmga4 Phosphoglucomutase
Phosphoglucomutase, C-terminal domain
TBP-like
A:421-433,433-450,496-504,510-521,547-553,558-561
381. 1t0t APC35880 0.0577234
d1t0tv_ YwfI homologue
Dimeric alpha+beta barrel
Ferredoxin-like
V:7-21,29-54,56-64,69-77,78-93,97-111
382. 1sqg SUN protein 0.0577234
d1sqga2 Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
S-adenosyl-L-methionine-dependent methyltransferases
S-adenosyl-L-methionine-dependent methyltransferases
A:174-179,184-196,198-202,207-212,222-226,227-231
383. 1gxu HYDROGENASE MATURATION PROTEIN HYPF 0.0577234
d1gxua_ Hydrogenase maturation protein HypF N-terminal domain (HypF-ACP)
Acylphosphatase/BLUF domain-like
Ferredoxin-like
A:4-16,21-34,36-43,44-51,66-70,70-83
384. 1wj9 CRISPR-associated protein 0.0577034
d1wj9a2 Hypothetical protein TTHB192
CRISPR-associated protein
Ferredoxin-like
A:91-102,117-134,145-155,170-183,184-195,206-211
385. 1jqg carboxypeptidase A 0.0576369
d1jqga2 Procarboxypeptidase A
Protease propeptides/inhibitors
Ferredoxin-like
A:9P-17P,19P-34P,35P-39P,51P-58P,57P-72P,73P-81P
386. 1q2l Protease III 0.0576103
d1q2la1 Protease III
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:546-557,562-581,592-598,600-610,612-627,698-707
387. 1zt2 DNA primase small subunit 0.0575705
d1zt2a1 DNA primase small subunit PriA
Prim-pol domain
Prim-pol domain
A:97-103,142-165,168-173,177-183,192-205,233-235
388. 1m55 Rep protein 0.0575606
d1m55a_ Replication protein Rep, nuclease domain
Origin of replication-binding domain, RBD-like
Origin of replication-binding domain, RBD-like
A:2-11,49-72,76-85,86-96,100-121,130-134
389. 2ibo Hypothetical protein SP2199 0.0574944
d2iboa1 Hypothetical protein SP2199
MTH1187/YkoF-like
Ferredoxin-like
A:2-12,14-33,35-40,41-48,48-68,69-79
390. 1r3n beta-alanine synthase 0.0572935
d1r3na2 Peptidase-like beta-alanine synthase
Bacterial exopeptidase dimerisation domain
Ferredoxin-like
A:248-263,273-293,294-304,313-323,325-347,352-363
391. 1s99 ykoF 0.0572181
d1s99a_ Putative thiamin/HMP-binding protein YkoF
MTH1187/YkoF-like
Ferredoxin-like
A:11-20,23-36,40-46,47-53,54-73,75-85
392. 1itp proteinase A inhibitor 1 0.0572050
d1itpa_ Proteinase A inhibitor 1, POIA1
Protease propeptides/inhibitors
Ferredoxin-like
A:4-11,15-30,31-40,41-49,60-65,64-72
393. 1fno PEPTIDASE T 0.0571853
d1fnoa3 Peptidase T (tripeptidase)
Bacterial exopeptidase dimerisation domain
Ferredoxin-like
A:208-219,246-250,259-269,271-282,283-303,309-319
394. 1gpj GLUTAMYL-TRNA REDUCTASE 0.0570060
d1gpja3 Glutamyl tRNA-reductase catalytic, N-terminal domain
Glutamyl tRNA-reductase catalytic, N-terminal domain
Ferredoxin-like
A:3-11,15-24,40-48,49-57,58-70,73-78
395. 2cpd APOBEC-1 stimulating protein 0.0569703
d2cpda1 APOBEC1 stimulating protein
RNA-binding domain, RBD
Ferredoxin-like
A:231-237,239-243,258-266,267-274,275-288,293-301
396. 1u7l Vacuolar ATP synthase subunit C 0.0569444
d1u7la_ Vacuolar ATP synthase subunit C
Vacuolar ATP synthase subunit C
Vacuolar ATP synthase subunit C
A:190-200,209-215,221-229,230-240,239-254,255-258
397. 1lxj HYPOTHETICAL 11.5KDA PROTEIN IN HTB2-NTH2 INT 0.0568958
d1lxja_ Hypothetical protein YB1001C
MTH1187/YkoF-like
Ferredoxin-like
A:5-15,21-37,39-44,45-52,52-71,74-83
398. 1ppj Ubiquinol-cytochrome C reductase complex core 0.0567472
d1ppja1 Cytochrome bc1 core subunit 1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:33-45,70-83,84-92,93-103,102-106,194-202
399. 1ufw Synaptojanin 2 0.0567086
d1ufwa_ Synaptojanin 2
RNA-binding domain, RBD
Ferredoxin-like
A:16-23,34-50,50-58,59-66,77-81,84-91
400. 2cqp RNA-binding protein 12 0.0566797
d2cqpa1 RNA-binding protein 12
RNA-binding domain, RBD
Ferredoxin-like
A:925-932,938-947,955-959,968-975,976-988,994-1002
401. 2hhv DNA Polymerase I 0.0564748
d2hhva2 DNA polymerase I (Klenow fragment)
DNA/RNA polymerases
DNA/RNA polymerases
A:646-655,793-819,822-829,830-838,837-841,863-870
402. 1jl0 S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 0.0564143
d1jl0a_ S-adenosylmethionine decarboxylase
S-adenosylmethionine decarboxylase
S-adenosylmethionine decarboxylase
A:174-183,185-194,237-248,249-258,263-276,278-287
403. 2aho Translation initiation factor 2 alpha subunit 0.0564111
d2ahob3 eIF-2-alpha, C-terminal domain
eIF-2-alpha, C-terminal domain
Ferredoxin-like
B:176-187,206-212,214-222,225-234,238-258,259-264
404. 1naq Periplasmic divalent cation tolerance protein 0.0563984
d1naqa_ Cut A1
GlnB-like
Ferredoxin-like
A:10-19,20-35,37-45,55-70,69-85,90-96
405. 1vrt HIV-1 REVERSE TRANSCRIPTASE 0.0562968
d1vrta2 HIV-1 reverse transcriptase
DNA/RNA polymerases
DNA/RNA polymerases
A:104-112,153-176,178-184,185-192,194-213,215-217
406. 1p1t Cleavage stimulation factor, 64 kDa subunit 0.0562556
d1p1ta_ Cleavage stimulation factor, 64 kda subunit
RNA-binding domain, RBD
Ferredoxin-like
A:17-22,28-40,43-46,58-64,66-78,85-92
407. 2hhv DNA Polymerase I 0.0562145
d2hhva2 DNA polymerase I (Klenow fragment)
DNA/RNA polymerases
DNA/RNA polymerases
A:646-655,793-819,822-829,830-838,840-857,863-870
408. 2b4v RNA editing complex protein MP57 0.0561482
d2b4va2 RNA editing terminal uridyl transferase 2, TUTase 2, RET2
Nucleotidyltransferase
Nucleotidyltransferase
A:176-183,187-199,202-211,213-222,241-245,247-253
409. 1q79 Poly(A) polymerase alpha 0.0561419
d1q79a3 Poly(A) polymerase, PAP, C-terminal domain
PAP/Archaeal CCA-adding enzyme, C-terminal domain
Ferredoxin-like
A:372-382,397-409,410-417,433-444,455-475,480-490
410. 1s48 RNA-dependent RNA polymerase 0.0560790
d1s48a_ Viral RNA polymerase
DNA/RNA polymerases
DNA/RNA polymerases
A:338-344,407-431,441-446,449-456,455-466,486-489
411. 2cb2 SULFUR OXYGENASE REDUCTASE 0.0560475
d2cb2a1 Sulfur oxygenase reductase SOR
Dimeric alpha+beta barrel
Ferredoxin-like
A:159-169,172-191,192-205,245-255,256-271,284-299
412. 1r8g Hypothetical protein ybdK 0.0560099
d1r8ga_ Carboxylate-amine ligase YbdK
Glutamine synthetase/guanido kinase
Glutamine synthetase/guanido kinase
A:12-26,33-42,48-53,57-67,68-91,92-96
413. 1hr6 MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBU 0.0559879
d1hr6a1 Mitochondrial processing peptidase (MPP) alpha chain
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:39-50,57-68,90-97,98-107,107-125,199-206
414. 1wj9 CRISPR-associated protein 0.0559315
d1wj9a1 Hypothetical protein TTHB192
CRISPR-associated protein
Ferredoxin-like
A:1-9,33-40,43-49,56-64,68-73,76-85
415. 1s99 ykoF 0.0557942
d1s99a_ Putative thiamin/HMP-binding protein YkoF
MTH1187/YkoF-like
Ferredoxin-like
A:11-20,36-41,40-46,47-53,54-73,75-85
416. 2bvc GLUTAMINE SYNTHETASE 1 0.0557569
d2bvca2 Glutamine synthetase, C-terminal domain
Glutamine synthetase/guanido kinase
Glutamine synthetase/guanido kinase
A:135-140,195-210,212-222,224-231,234-257,258-262
417. 1x5s Cold-inducible RNA-binding protein 0.0557258
d1x5sa1 Cold-inducible RNA-binding protein
RNA-binding domain, RBD
Ferredoxin-like
A:13-19,25-37,40-45,55-61,63-76,81-89
418. 1qup SUPEROXIDE DISMUTASE 1 COPPER CHAPERONE 0.0556700
d1qupa2 Copper chaperone for superoxide dismutase, N-terminal domain
HMA, heavy metal-associated domain
Ferredoxin-like
A:6-13,17-31,33-42,43-51,53-65,68-71
419. 1s99 ykoF 0.0556638
d1s99a_ Putative thiamin/HMP-binding protein YkoF
MTH1187/YkoF-like
Ferredoxin-like
A:114-124,128-144,145-151,152-159,159-179,180-190
420. 1vlo Aminomethyltransferase 0.0556266
d1vloa2 Glycine cleavage system T protein, GcvT
Folate-binding domain
Folate-binding domain
A:51-59,60-71,93-104,107-115,114-130,134-139
421. 1uku periplasmic divalent cation tolerance protein 0.0555648
d1ukua_ Cut A1
GlnB-like
Ferredoxin-like
A:1-9,10-25,27-31,43-58,58-73,80-85
422. 2cpx Hypothetical protein FLJ11016 0.0554139
d2cpxa1 RNA-binding protein 41, RBM41
RNA-binding domain, RBD
Ferredoxin-like
A:309-315,321-330,340-345,351-357,359-371,377-385
423. 1zhv hypothetical protein Atu0741 0.0554017
d1zhva1 Hypothetical protein Atu0741
ACT-like
Ferredoxin-like
A:13-21,26-31,35-40,42-50,54-58,58-61
424. 1t3t Phosphoribosylformylglycinamidine synthase 0.0553373
d1t3ta7 FGAM synthase PurL, PurM-like module, C1 and C2 domains
PurM C-terminal domain-like
PurM C-terminal domain-like
A:823-832,859-877,879-885,924-933,932-947,951-960
425. 1sqg SUN protein 0.0553159
d1sqga2 Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
S-adenosyl-L-methionine-dependent methyltransferases
S-adenosyl-L-methionine-dependent methyltransferases
A:174-179,184-196,198-202,207-212,216-221,227-231
426. 2fge zinc metalloprotease (insulinase family) 0.0552914
d2fgea1 Presequence protease 1, PREP1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:573-583,610-622,622-633,640-652,654-669,758-764
427. 2cve hypothetical protein TTHA1053 0.0552761
d2cvea2 Hypothetical protein TTHA1053, C-terminal domain
EF-G C-terminal domain-like
Ferredoxin-like
A:126-135,135-150,153-159,160-170,169-185,188-191
428. 2aho Translation initiation factor 2 alpha subunit 0.0552700
d2ahob3 eIF-2-alpha, C-terminal domain
eIF-2-alpha, C-terminal domain
Ferredoxin-like
B:176-187,206-212,214-222,225-234,235-239,259-264
429. 1jjc PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN 0.0552090
d1jjcb4 Phenylalanyl-tRNA synthetase
Anticodon-binding domain of PheRS
Ferredoxin-like
B:692-703,702-706,721-732,739-750,757-776,777-784
430. 1h3d ATP-PHOSPHORIBOSYLTRANSFERASE 0.0551846
d1h3da2 ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain
GlnB-like
Ferredoxin-like
A:225-232,234-238,251-254,264-271,274-285,289-293
431. 1q2l Protease III 0.0551542
d1q2la2 Protease III
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:755-764,783-795,800-809,810-821,824-846,918-927
432. 1phz PROTEIN (PHENYLALANINE HYDROXYLASE) 0.0549541
d1phza1 Phenylalanine hydroxylase N-terminal domain
ACT-like
Ferredoxin-like
A:33-43,46-59,64-70,75-85,84-88,106-111
433. 2ghp U4/U6 snRNA-associated splicing factor PRP24 0.0548095
d2ghpa3 U4/U6 snRNA-associated-splicing factor PRP24
RNA-binding domain, RBD
Ferredoxin-like
A:210-216,218-223,236-242,254-261,262-274,279-287
434. 1gx5 RNA-DIRECTED RNA POLYMERASE 0.0547735
d1gx5a_ Viral RNA polymerase
DNA/RNA polymerases
DNA/RNA polymerases
A:213-220,284-307,310-317,318-326,328-347,356-358
435. 1xhx DNA polymerase 0.0547046
d1xhxa2 phi29 DNA polymerase
DNA/RNA polymerases
DNA/RNA polymerases
A:240-251,426-449,451-457,458-464,468-475,482-490
436. 1khv RNA-DIRECTED RNA POLYMERASE 0.0547016
d1khva_ Viral RNA polymerase
DNA/RNA polymerases
DNA/RNA polymerases
A:245-252,342-348,348-353,354-360,367-379,381-385
437. 3pmg ALPHA-D-GLUCOSE-1,6-BISPHOSPHATE 0.0546597
d3pmga4 Phosphoglucomutase
Phosphoglucomutase, C-terminal domain
TBP-like
A:421-433,433-450,496-504,510-521,530-547,558-561
438. 1jl0 S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 0.0545881
d1jl0a_ S-adenosylmethionine decarboxylase
S-adenosylmethionine decarboxylase
S-adenosylmethionine decarboxylase
A:174-183,208-214,237-248,249-258,263-276,278-287
439. 1umg 385aa long conserved hypothetical protein 0.0542918
d1umga_ ST0318
Sulfolobus fructose-1,6-bisphosphatase-like
Sulfolobus fructose-1,6-bisphosphatase-like
A:124-133,135-149,210-218,234-241,247-258,290-301
440. 1kp6 PROTEIN (TOXIN) 0.0541771
d1kp6a_ Killer toxin KP6 alpha-subunit
Killer toxin KP6 alpha-subunit
Ferredoxin-like
A:13-22,27-35,42-47,48-54,57-69,70-77
441. 2q43 IAA-amino acid hydrolase ILR1-like 2 0.0541419
d2q43a2 IAA-amino acid hydrolase
Bacterial exopeptidase dimerisation domain
Ferredoxin-like
A:195-206,217-236,243-253,263-274,276-296,310-312
442. 1w25 STALKED-CELL DIFFERENTIATION CONTROLLING PROT 0.0541243
d1w25a3 Response regulator PleD, C-terminal domain
Nucleotide cyclase
Ferredoxin-like
A:320-329,339-359,362-368,370-378,380-399,412-420
443. 1u7l Vacuolar ATP synthase subunit C 0.0538793
d1u7la_ Vacuolar ATP synthase subunit C
Vacuolar ATP synthase subunit C
Vacuolar ATP synthase subunit C
A:190-200,199-210,221-229,230-240,239-254,255-258
444. 1hw8 HMG-COA REDUCTASE 0.0538503
d1hw8a1 NAD-binding domain of HMG-CoA reductase
NAD-binding domain of HMG-CoA reductase
Ferredoxin-like
A:587-596,598-612,628-640,641-652,656-676,678-684
445. 1x5u Splicing factor 3B subunit 4 (Spliceosome ass 0.0537866
d1x5ua1 Splicing factor 3B subunit 4
RNA-binding domain, RBD
Ferredoxin-like
A:16-22,24-28,41-47,58-65,66-79,84-92
446. 2fge zinc metalloprotease (insulinase family) 0.0537750
d2fgea3 Presequence protease 1, PREP1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:296-306,332-342,345-354,359-367,369-391,474-485
447. 2bf5 TOLUENE-4-MONOOXYGENASE SYSTEM PROTEIN D 0.0537230
d2bf5a1 Toluene-4-monooxygenase catalytic effector protein
Monooxygenase (hydroxylase) regulatory protein
Monooxygenase (hydroxylase) regulatory protein
A:12-19,19-35,39-45,46-53,72-80,80-83
448. 1x5s Cold-inducible RNA-binding protein 0.0537201
d1x5sa1 Cold-inducible RNA-binding protein
RNA-binding domain, RBD
Ferredoxin-like
A:13-19,21-25,40-45,55-61,63-76,81-89
449. 1q8k Eukaryotic translation initiation factor 2 su 0.0536653
d1q8ka2 eIF-2-alpha, C-terminal domain
eIF-2-alpha, C-terminal domain
Ferredoxin-like
A:187-198,200-219,222-229,233-241,242-265,266-272
450. 2cb2 SULFUR OXYGENASE REDUCTASE 0.0535705
d2cb2a1 Sulfur oxygenase reductase SOR
Dimeric alpha+beta barrel
Ferredoxin-like
A:4-15,16-38,39-52,70-81,82-94,112-120
451. 1s5j DNA polymerase I 0.0535676
d1s5ja2 Family B DNA polymerase
DNA/RNA polymerases
DNA/RNA polymerases
A:508-516,622-648,650-656,657-663,665-681,683-692
452. 1wg5 Heterogeneous nuclear ribonucleoprotein H 0.0535475
d1wg5a_ Heterogeneous nuclear ribonucleoprotein H'
RNA-binding domain, RBD
Ferredoxin-like
A:16-22,28-37,45-49,58-64,66-77,86-91
453. 1ixk Methyltransferase 0.0535361
d1ixka_ Hypothetical methyltransferase PH1374
S-adenosyl-L-methionine-dependent methyltransferases
S-adenosyl-L-methionine-dependent methyltransferases
A:45-50,55-67,67-73,78-86,88-92,99-103
454. 1ppj Ubiquinol-cytochrome C reductase complex core 0.0535332
d1ppjb2 Cytochrome bc1 core subunit 2
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
B:251-264,293-304,307-315,318-330,329-350,422-428
455. 2cqb Peptidyl-prolyl cis-trans isomerase E 0.0534931
d2cqba1 Peptidyl-prolyl cis-trans isomerase E, N-terminal domain
RNA-binding domain, RBD
Ferredoxin-like
A:6-12,14-18,31-37,48-55,56-68,74-82
456. 1fjc NUCLEOLIN RBD2 0.0534817
d1fjca_ Nucleolin
RNA-binding domain, RBD
Ferredoxin-like
A:17-23,25-29,41-48,53-60,62-74,83-88
457. 1f3v TUMOR NECROSIS FACTOR RECEPTOR TYPE 1 ASSOCIA 0.0533789
d1f3va_ TRADD, N-terminal domain
TRADD, N-terminal domain
Ferredoxin-like
A:11-22,34-54,58-67,70-79,79-93,113-121
458. 1sqe hypothetical protein PG130 0.0531745
d1sqea_ Hypothetical protein PG130 (SAV0165)
Dimeric alpha+beta barrel
Ferredoxin-like
A:17-27,28-41,49-58,64-74,75-85,107-118
459. 2cz4 hypothetical protein TTHA0516 0.0531096
d2cz4a1 Hypothetical protein TTHA0516
GlnB-like
Ferredoxin-like
A:2-15,14-29,33-39,54-63,78-82,84-95
460. 1ftr FORMYLMETHANOFURAN:TETRAHYDROMETHANOPTERIN FO 0.0530701
d1ftra2 Formylmethanofuran:tetrahydromethanopterin formyltransferase
Formylmethanofuran:tetrahydromethanopterin formyltransferase
Ferredoxin-like
A:163-174,175-194,195-198,241-251,252-271,272-279
461. 2aho Translation initiation factor 2 alpha subunit 0.0530279
d2ahob3 eIF-2-alpha, C-terminal domain
eIF-2-alpha, C-terminal domain
Ferredoxin-like
B:176-187,191-205,214-222,225-234,238-258,259-264
462. 1ekr MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN C 0.0530251
d1ekra_ Molybdenum cofactor biosynthesis protein C, MoaC
Molybdenum cofactor biosynthesis protein C, MoaC
Ferredoxin-like
A:22-36,53-69,82-92,95-108,111-131,137-148
463. 2f5g Transposase, putative 0.0528178
d2f5ga1 Putative transposase SSO1474
Transposase IS200-like
Ferredoxin-like
A:13-22,29-48,49-58,59-67,72-93,100-102
464. 1rki hypothetical protein 0.0527454
d1rkia1 Hypothetical protein PAE0736
THUMP domain-like
THUMP domain
A:2-10,25-30,32-37,40-47,57-64,63-71
465. 2fge zinc metalloprotease (insulinase family) 0.0526288
d2fgea1 Presequence protease 1, PREP1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:573-583,593-604,622-633,640-652,651-655,758-764
466. 1mli MUCONOLACTONE ISOMERASE 0.0526177
d1mlia_ Muconalactone isomerase, MLI
Dimeric alpha+beta barrel
Ferredoxin-like
A:1-10,16-38,39-46,51-58,71-77,76-84
467. 1umg 385aa long conserved hypothetical protein 0.0526122
d1umga_ ST0318
Sulfolobus fructose-1,6-bisphosphatase-like
Sulfolobus fructose-1,6-bisphosphatase-like
A:3-12,23-41,43-52,53-62,67-89,111-119
468. 1vlo Aminomethyltransferase 0.0524824
d1vloa2 Glycine cleavage system T protein, GcvT
Folate-binding domain
Folate-binding domain
A:51-59,60-71,93-104,107-115,129-133,134-139
469. 1khv RNA-DIRECTED RNA POLYMERASE 0.0524549
d1khva_ Viral RNA polymerase
DNA/RNA polymerases
DNA/RNA polymerases
A:245-252,342-348,348-353,354-360,361-368,381-385
470. 1x9m DNA polymerase 0.0523560
d1x9ma2 T7 phage DNA polymerase
DNA/RNA polymerases
DNA/RNA polymerases
A:469-477,605-637,645-653,654-661,662-685,691-698
471. 1tz0 hypothetical protein 0.0523122
d1tz0a_ Hypothetical protein BC2969
Dimeric alpha+beta barrel
Ferredoxin-like
A:3-15,15-26,36-45,50-62,62-72,90-102
472. 1lfw pepV 0.0523067
d1lfwa2 Aminopeptidase PepV
Bacterial exopeptidase dimerisation domain
Ferredoxin-like
A:187-197,293-308,327-339,340-352,368-372,371-376
473. 1mml MMLV REVERSE TRANSCRIPTASE 0.0522030
d1mmla_ MMLV reverse transcriptase
DNA/RNA polymerases
DNA/RNA polymerases
A:144-152,207-215,217-223,224-231,232-251,253-255
474. 1t0t APC35880 0.0520373
d1t0tv_ YwfI homologue
Dimeric alpha+beta barrel
Ferredoxin-like
V:139-149,160-179,182-189,196-204,205-220,225-237
475. 1nh8 ATP Phosphoribosyltransferase 0.0520318
d1nh8a2 ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain
GlnB-like
Ferredoxin-like
A:211-221,220-224,237-242,246-256,255-270,271-278
476. 1j27 hypothetical protein TT1725 0.0519049
d1j27a_ Hypothetical protein TT1725
Hypothetical protein TT1725
Ferredoxin-like
A:1-16,18-38,39-46,51-62,63-82,84-98
477. 2f2a Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfer 0.0518726
d2f2ab2 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain
Glutamine synthetase/guanido kinase
Glutamine synthetase/guanido kinase
B:4-15,52-67,123-128,143-155,159-178,188-198
478. 1z2l Allantoate amidohydrolase 0.0518215
d1z2la2 Allantoate amidohydrolase AllC
Bacterial exopeptidase dimerisation domain
Ferredoxin-like
A:213-229,239-259,262-272,281-292,293-316,317-328
479. 1i19 CHOLESTEROL OXIDASE 0.0518188
d1i19a1 Cholesterol oxidase
FAD-linked oxidases, C-terminal domain
Ferredoxin-like
A:430-440,440-466,472-481,510-520,523-543,546-550
480. 1cg2 CARBOXYPEPTIDASE G2 0.0517893
d1cg2a2 Carboxypeptidase G2
Bacterial exopeptidase dimerisation domain
Ferredoxin-like
A:214-230,239-256,259-270,279-290,291-309,314-324
481. 2u1a U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A 0.0516929
d2u1aa_ Splicesomal U1A protein
RNA-binding domain, RBD
Ferredoxin-like
A:14-22,26-38,39-45,51-58,59-71,84-86
482. 2aho Translation initiation factor 2 alpha subunit 0.0513136
d2ahob3 eIF-2-alpha, C-terminal domain
eIF-2-alpha, C-terminal domain
Ferredoxin-like
B:176-187,191-205,214-222,225-234,235-239,259-264
483. 2fyx transposase, putative 0.0512584
d2fyxa1 Putative transposase DR0177
Transposase IS200-like
Ferredoxin-like
A:11-20,27-46,47-56,57-65,70-91,102-104
484. 1muk MINOR CORE PROTEIN LAMBDA 3 0.0512374
d1muka_ Reovirus polymerase lambda3
DNA/RNA polymerases
DNA/RNA polymerases
A:578-587,684-705,728-733,734-742,749-767,770-775
485. 1p1t Cleavage stimulation factor, 64 kDa subunit 0.0511143
d1p1ta_ Cleavage stimulation factor, 64 kda subunit
RNA-binding domain, RBD
Ferredoxin-like
A:17-22,24-28,43-46,58-64,66-78,85-92
486. 1azs VC1 0.0510230
d1azsa_ Adenylyl cyclase VC1, domain C1a
Nucleotide cyclase
Ferredoxin-like
A:388-399,408-431,432-439,440-447,454-478,481-491
487. 1wc3 ADENYLATE CYCLASE 0.0509217
d1wc3a_ Adenylate cyclase CyaC
Nucleotide cyclase
Ferredoxin-like
A:1010-1020,1029-1052,1053-1060,1061-1068,1074-1104,1114-1124
488. 2cb2 SULFUR OXYGENASE REDUCTASE 0.0508751
d2cb2a1 Sulfur oxygenase reductase SOR
Dimeric alpha+beta barrel
Ferredoxin-like
A:4-15,16-38,39-52,70-81,93-108,112-120
489. 1pbu Elongation factor 1-gamma 0.0508130
d1pbua_ Elongation factor 1-gamma C-terminal domain
eEF1-gamma domain
Ferredoxin-like
A:318-326,334-350,355-366,367-379,391-397,396-402
490. 1x7v PA3566 protein 0.0505945
d1x7va_ Hypothetical protein PA3566
Dimeric alpha+beta barrel
Ferredoxin-like
A:4-14,17-35,37-46,51-60,80-85,84-94
491. 2hhp Poly(A) polymerase 0.0505663
d2hhpa3 Poly(A) polymerase, PAP, C-terminal domain
PAP/Archaeal CCA-adding enzyme, C-terminal domain
Ferredoxin-like
A:359-370,371-396,398-405,457-471,480-497,504-514
492. 1tuw Tetracenomycin polyketide synthesis protein t 0.0505331
d1tuwa_ Tetracenomycin polyketide synthesis protein TcmI
Dimeric alpha+beta barrel
Ferredoxin-like
A:2-11,29-36,38-46,47-56,58-70,83-85
493. 1gqe RELEASE FACTOR 2 0.0504490
d1gqea_ Polypeptide chain release factor 2 (RF2)
Release factor
Release factor
A:127-135,137-160,161-171,175-185,187-196,213-225
494. 1q8k Eukaryotic translation initiation factor 2 su 0.0504007
d1q8ka2 eIF-2-alpha, C-terminal domain
eIF-2-alpha, C-terminal domain
Ferredoxin-like
A:187-198,200-219,222-229,233-241,242-265,275-277
495. 1ftr FORMYLMETHANOFURAN:TETRAHYDROMETHANOPTERIN FO 0.0502639
d1ftra2 Formylmethanofuran:tetrahydromethanopterin formyltransferase
Formylmethanofuran:tetrahydromethanopterin formyltransferase
Ferredoxin-like
A:163-174,175-194,204-206,241-251,252-271,272-279
496. 2cpx Hypothetical protein FLJ11016 0.0500776
d2cpxa1 RNA-binding protein 41, RBM41
RNA-binding domain, RBD
Ferredoxin-like
A:309-315,317-321,340-345,351-357,359-371,377-385
497. 2cpz CUG triplet repeat RNA-binding protein 1 0.0500751
d2cpza1 CUG triplet repeat RNA-binding protein 1
RNA-binding domain, RBD
Ferredoxin-like
A:401-407,409-413,427-433,443-449,451-464,469-477
498. 1gml CCT-GAMMA 0.0500501
d1gmla_ Thermosome, A-domain
GroEL apical domain-like
The "swivelling" beta/beta/alpha domain
A:213-222,316-328,346-349,357-367,368-372,373-378
499. 1ppj Ubiquinol-cytochrome C reductase complex core 0.0500325
d1ppja1 Cytochrome bc1 core subunit 1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:33-45,52-66,84-92,93-103,102-106,194-202
500. 1u6f RNA-binding protein UBP1 0.0500300
d1u6fa1 RNA-binding protein UBP1
RNA-binding domain, RBD
Ferredoxin-like
A:43-49,55-68,68-73,86-92,93-105,111-119
501. 2cb2 SULFUR OXYGENASE REDUCTASE 0.0499575
d2cb2a1 Sulfur oxygenase reductase SOR
Dimeric alpha+beta barrel
Ferredoxin-like
A:159-169,172-191,192-205,245-255,270-284,284-299
502. 1wdt elongation factor G homolog 0.0498157
d1wdta4 Elongation factor G (EF-G)
EF-G C-terminal domain-like
Ferredoxin-like
A:571-584,583-598,599-608,609-618,618-623,637-649
503. 1f0x D-LACTATE DEHYDROGENASE 0.0497934
d1f0xa1 D-lactate dehydrogenase
FAD-linked oxidases, C-terminal domain
Ferredoxin-like
A:451-463,474-482,481-491,492-503,506-522,522-526
504. 1lq9 ACTVA-ORF6 MONOOXYGENASE 0.0495958
d1lq9a_ Actinorhodin biosynthesis monooxygenase ActVa-Orf6
Dimeric alpha+beta barrel
Ferredoxin-like
A:10-21,37-43,45-54,57-67,79-92,94-96
505. 1tz0 hypothetical protein 0.0494584
d1tz0a_ Hypothetical protein BC2969
Dimeric alpha+beta barrel
Ferredoxin-like
A:3-15,29-34,36-45,50-62,62-72,90-102
506. 1r3e tRNA pseudouridine synthase B 0.0494438
d1r3ea2 Pseudouridine synthase II TruB
Pseudouridine synthase
Pseudouridine synthase
A:72-83,104-118,150-160,166-176,179-192,194-206
507. 1kb9 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE 0.0493681
d1kb9b2 Cytochrome bc1 core subunit 2
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
B:236-246,265-272,271-280,281-292,293-311,351-357
508. 1oy8 Acriflavine resistance protein B 0.0492490
d1oy8a2 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Ferredoxin-like
A:136-146,150-163,173-179,286-293,310-317,319-329
509. 1q79 Poly(A) polymerase alpha 0.0492368
d1q79a3 Poly(A) polymerase, PAP, C-terminal domain
PAP/Archaeal CCA-adding enzyme, C-terminal domain
Ferredoxin-like
A:372-382,397-409,420-423,433-444,455-475,480-490
510. 1vly Unknown protein from 2D-page 0.0489764
d1vlya2 Hypothetical protein YgfZ, N-terminal domain
Folate-binding domain
Folate-binding domain
A:26-35,34-45,67-77,81-88,87-103,106-112
511. 2cpe RNA-binding protein EWS 0.0489356
d2cpea1 RNA-binding protein EWS
RNA-binding domain, RBD
Ferredoxin-like
A:361-367,373-385,397-401,411-417,419-431,437-445
512. 1t95 Hypothetical protein AF0491 0.0488687
d1t95a3 Hypothetical protein AF0491, C-terminal domain
EF-G C-terminal domain-like
Ferredoxin-like
A:168-178,177-181,193-201,203-213,212-228,231-234
513. 1jmt SPLICING FACTOR U2AF 35 KDA SUBUNIT 0.0488615
d1jmta_ U2AF35 (35 KDa subunit)
RNA-binding domain, RBD
Ferredoxin-like
A:44-50,63-94,95-104,110-118,119-133,141-145
514. 1xhx DNA polymerase 0.0486594
d1xhxa2 phi29 DNA polymerase
DNA/RNA polymerases
DNA/RNA polymerases
A:240-251,426-449,451-457,458-464,468-475,490-495
515. 1oy8 Acriflavine resistance protein B 0.0482439
d1oy8a2 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Ferredoxin-like
A:136-146,150-163,173-179,286-293,298-306,319-329
516. 1f3v TUMOR NECROSIS FACTOR RECEPTOR TYPE 1 ASSOCIA 0.0478858
d1f3va_ TRADD, N-terminal domain
TRADD, N-terminal domain
Ferredoxin-like
A:11-22,34-54,58-67,70-79,93-108,113-121
517. 1vef Acetylornithine/acetyl-lysine aminotransferas 0.0478515
d1vefa1 Acetylornithine/acetyl-lysine aminotransferase ArgD
PLP-dependent transferases
PLP-dependent transferases
A:105-112,112-129,248-253,261-268,269-276,284-286
518. 1t0t APC35880 0.0477259
d1t0tv_ YwfI homologue
Dimeric alpha+beta barrel
Ferredoxin-like
V:7-21,29-54,56-64,69-77,92-98,97-111
519. 1u2f PROTEIN (SPLICING FACTOR U2AF 65 KD SUBUNIT) 0.0476508
d1u2fa_ Splicing factor U2AF 65 KDa subunit
RNA-binding domain, RBD
Ferredoxin-like
A:2-8,14-30,39-47,48-55,60-68,77-81
520. 1tuw Tetracenomycin polyketide synthesis protein t 0.0475602
d1tuwa_ Tetracenomycin polyketide synthesis protein TcmI
Dimeric alpha+beta barrel
Ferredoxin-like
A:2-11,29-36,38-46,47-56,72-83,83-85
521. 2f1f Acetolactate synthase isozyme III small subun 0.0474969
d2f1fa2 Acetolactate synthase small subunit, IlvH
ACT-like
Ferredoxin-like
A:80-93,94-109,110-117,118-127,127-139,142-146
522. 1q79 Poly(A) polymerase alpha 0.0474608
d1q79a3 Poly(A) polymerase, PAP, C-terminal domain
PAP/Archaeal CCA-adding enzyme, C-terminal domain
Ferredoxin-like
A:372-382,383-398,410-417,433-444,455-475,480-490
523. 1s0a Adenosylmethionine-8-amino-7-oxononanoate ami 0.0474271
d1s0aa_ Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
PLP-dependent transferases
PLP-dependent transferases
A:104-111,111-131,268-273,282-289,290-300,310-312
524. 2gvk Heme peroxidase 0.0470743
d2gvka1 Hypothetical protein BT1219
Dimeric alpha+beta barrel
Ferredoxin-like
A:22-32,34-48,62-71,107-115,116-132,134-145
525. 1lq9 ACTVA-ORF6 MONOOXYGENASE 0.0465333
d1lq9a_ Actinorhodin biosynthesis monooxygenase ActVa-Orf6
Dimeric alpha+beta barrel
Ferredoxin-like
A:10-21,37-43,45-54,57-67,68-80,94-96
526. 2f1f Acetolactate synthase isozyme III small subun 0.0462321
d2f1fa2 Acetolactate synthase small subunit, IlvH
ACT-like
Ferredoxin-like
A:80-93,94-109,110-117,118-127,138-143,142-146
527. 1nz8 TRANSCRIPTION ANTITERMINATION PROTEIN NUSG 0.0462043
d1nz8a_ N-utilization substance G protein NusG, N-terminal domain
N-utilization substance G protein NusG, N-terminal domain
Ferredoxin-like
A:3-10,30-35,34-40,64-71,79-88,101-104
528. 1lfw pepV 0.0461744
d1lfwa2 Aminopeptidase PepV
Bacterial exopeptidase dimerisation domain
Ferredoxin-like
A:187-197,293-308,327-339,340-352,368-372,379-382
529. 1sh0 RNA Polymerase 0.0452468
d1sh0a_ Viral RNA polymerase
DNA/RNA polymerases
DNA/RNA polymerases
A:236-241,304-326,336-342,343-350,354-366,381-383
530. 2fge zinc metalloprotease (insulinase family) 0.0450593
d2fgea3 Presequence protease 1, PREP1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:296-306,332-342,344-346,359-367,369-391,474-485
531. 2cpx Hypothetical protein FLJ11016 0.0450390
d2cpxa1 RNA-binding protein 41, RBM41
RNA-binding domain, RBD
Ferredoxin-like
A:309-315,329-336,340-345,351-357,359-371,377-385
532. 2fge zinc metalloprotease (insulinase family) 0.0448833
d2fgea1 Presequence protease 1, PREP1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:573-583,610-622,622-633,640-652,651-655,758-764
533. 1rq0 Peptide chain release factor 1 0.0447067
d1rq0a_ Peptide chain release factor 1, RF1
Release factor
Release factor
A:86-97,97-120,121-132,134-147,147-156,173-185
534. 1u04 hypothetical protein PF0537 0.0442733
d1u04a1 Argonaute homologue PF0537
PAZ domain
SH3-like barrel
A:8-13,102-115,121-136,137-152,292-308,311-313
535. 1q2l Protease III 0.0440509
d1q2la1 Protease III
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:546-557,562-581,592-598,600-610,609-613,698-707
536. 1t0t APC35880 0.0435844
d1t0tv_ YwfI homologue
Dimeric alpha+beta barrel
Ferredoxin-like
V:139-149,160-179,182-189,196-204,219-226,225-237
537. 1mml MMLV REVERSE TRANSCRIPTASE 0.0431854
d1mmla_ MMLV reverse transcriptase
DNA/RNA polymerases
DNA/RNA polymerases
A:144-152,192-208,217-223,224-231,232-251,259-262
538. 1pbu Elongation factor 1-gamma 0.0430515
d1pbua_ Elongation factor 1-gamma C-terminal domain
eEF1-gamma domain
Ferredoxin-like
A:318-326,349-356,355-366,367-379,391-397,396-402
539. 1hr6 MITOCHONDRIAL PROCESSING PEPTIDASE BETA SUBUN 0.0429849
d1hr6b2 Mitochondrial processing peptidase (MPP) beta chain
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
B:264-274,307-315,320-331,332-344,348-366,439-445
540. 1q79 Poly(A) polymerase alpha 0.0427734
d1q79a3 Poly(A) polymerase, PAP, C-terminal domain
PAP/Archaeal CCA-adding enzyme, C-terminal domain
Ferredoxin-like
A:372-382,383-398,420-423,433-444,455-475,480-490
541. 1zpw hypothetical protein TT1823 0.0427204
d1zpwx1 Hypothetical protein TTP0101 (TT1823)
TTP0101/SSO1404-like
Ferredoxin-like
X:3-12,14-29,29-33,35-42,42-57,62-69
542. 1uc2 hypothetical protein PH1602 0.0419375
d1uc2a_ Hypothetical protein PH1602
Hypothetical protein PH1602
Hypothetical protein PH1602
A:97-106,115-128,203-214,227-237,314-320,319-328
543. 1ih7 DNA POLYMERASE 0.0390747
d1ih7a2 Family B DNA polymerase
DNA/RNA polymerases
DNA/RNA polymerases
A:406-413,579-610,616-622,623-629,658-675,682-690
544. 1s48 RNA-dependent RNA polymerase 0.0380358
d1s48a_ Viral RNA polymerase
DNA/RNA polymerases
DNA/RNA polymerases
A:338-344,407-431,441-446,449-456,465-474,486-489
545. 2f2a Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfer 0.0366838
d2f2ab2 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain
Glutamine synthetase/guanido kinase
Glutamine synthetase/guanido kinase
B:4-15,52-67,111-123,143-155,159-178,188-198
546. 2f2a Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfer 0.0357500
d2f2ab2 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain
Glutamine synthetase/guanido kinase
Glutamine synthetase/guanido kinase
B:4-15,52-67,111-123,143-155,183-187,188-198
547. 2fge zinc metalloprotease (insulinase family) 0.0339259
d2fgea3 Presequence protease 1, PREP1
LuxS/MPP-like metallohydrolase
LuxS/MPP-like metallohydrolase
A:296-306,332-342,344-346,366-370,369-391,474-485
548. 2bbv PROTEIN (BLACK BEETLE VIRUS CAPSID PROTEIN) 0.0319428
d2bbva_ Alphanodavirus capsid protein
Positive stranded ssRNA viruses
Nucleoplasmin-like/VP (viral coat and capsid proteins)
A:89-105,155-163,162-167,309-324,324-328,333-336
549. 2bbv PROTEIN (BLACK BEETLE VIRUS CAPSID PROTEIN) 0.0312881
d2bbva_ Alphanodavirus capsid protein
Positive stranded ssRNA viruses
Nucleoplasmin-like/VP (viral coat and capsid proteins)
A:89-105,147-153,162-167,309-324,324-328,333-336
550. 1yvu hypothetical protein aq_1447 0.0289210
d1yvua1 Argonaute homologue Aq 1447
PAZ domain
SH3-like barrel
A:8-16,122-128,132-149,151-166,279-302,301-306
551. 1yvu hypothetical protein aq_1447 0.0279806
d1yvua1 Argonaute homologue Aq 1447
PAZ domain
SH3-like barrel
A:8-16,109-123,132-149,151-166,279-302,301-306
