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Results Summary:
The query matrix is available at here. The target database is pdb_genmatrix
This query finds 153 pdb hits containing 428 motifs (shown as below) spanning over 6 SCOP folds and 10 SCOP superfamilies
The ranking list of motif hits is shown as below. The description of each motif is formatted as:
1. 1y0y Frv operon protein FrvX 0.0832293 d1y0ya1 Frv operon protein FrvX Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like A:72-81,83-91,99-107,111-119,139-143,160-165 2. 1xfo Frv operon protein FrvX 0.0831186 d1xfob1 Frv operon protein FrvX Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like B:72-81,83-91,99-107,111-120,138-143,160-165 3. 1y0r Frv operon protein FrvX 0.0828775 d1y0ra1 Frv operon protein FrvX Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like A:72-81,83-91,99-107,111-119,139-143,160-165 4. 1xfo Frv operon protein FrvX 0.0824266 d1xfoa1 Frv operon protein FrvX Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like A:72-81,83-91,99-107,111-120,138-143,160-165 5. 1xfo Frv operon protein FrvX 0.0822301 d1xfoc1 Frv operon protein FrvX Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like C:72-81,83-91,99-107,111-120,138-143,160-165 6. 2jj2 ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0819941 Not in scop A:26-36,37-43,50-56,58-68,69-77,86-90 7. 2jj2 ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0815927 Not in scop H:26-36,37-43,50-56,58-68,69-77,86-90 8. 1cow BOVINE MITOCHONDRIAL F1-ATPASE 0.0811359 d1cowc2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like C:26-36,37-43,50-56,58-68,69-76,86-91 9. 1d8s F1 ATPASE (ALPHA SUBUNIT) 0.0809520 d1d8sc_ ATP synthase ATP synthase ATP synthase C:26-36,37-43,50-56,58-68,69-76,86-91 10. 1qo1 ATP SYNTHASE ALPHA CHAIN 0.0809520 d1qo1c_ ATP synthase ATP synthase ATP synthase C:26-36,37-43,50-56,58-68,69-76,86-91 11. 1bmf BOVINE MITOCHONDRIAL F1-ATPASE 0.0809389 d1bmfc2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like C:26-36,37-43,50-56,58-68,69-76,86-91 12. 1efr BOVINE MITOCHONDRIAL F1-ATPASE 0.0808865 d1efrc2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like C:26-36,37-43,50-56,58-68,69-76,86-91 13. 1e1r BOVINE MITOCHONDRIAL F1-ATPASE 0.0808277 d1e1rc2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like C:26-36,37-43,50-56,58-68,69-76,86-91 14. 1w0k ATP SYNTHASE ALPHA CHAIN HEART ISOFORM, MITOC 0.0802568 d1w0ka2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:26-36,37-43,50-56,58-68,69-76,86-91 15. 1cow BOVINE MITOCHONDRIAL F1-ATPASE 0.0799936 d1cowb2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:26-36,37-43,50-56,58-68,69-76,86-91 16. 2jiz ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0798021 Not in scop C:26-36,37-43,50-56,58-68,69-76,86-91 17. 1qo1 ATP SYNTHASE ALPHA CHAIN 0.0797639 d1qo1b_ ATP synthase ATP synthase ATP synthase B:26-36,37-43,50-56,58-68,69-76,86-91 18. 1bmf BOVINE MITOCHONDRIAL F1-ATPASE 0.0797575 d1bmfb2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:26-36,37-43,50-56,58-68,69-76,86-91 19. 1efr BOVINE MITOCHONDRIAL F1-ATPASE 0.0795925 d1efrb2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:26-36,37-43,50-56,58-68,69-76,86-91 20. 2hld ATP synthase alpha chain, mitochondrial 0.0788022 Not in scop A:28-38,39-45,52-58,60-70,71-79,88-93 21. 1vhe aminopeptidase/glucanase homolog 0.0781006 d1vhea1 Hypothetical protein YsdC Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like A:72-81,83-91,100-108,109-118,138-142,157-164 22. 2gre Deblocking aminopeptidase 0.0780884 d2greb1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like B:73-82,84-92,100-109,111-120,141-146,162-169 23. 2hld ATP synthase alpha chain, mitochondrial 0.0777665 Not in scop U:28-38,39-45,52-58,60-70,71-79,88-93 24. 1cow BOVINE MITOCHONDRIAL F1-ATPASE 0.0777605 d1cowa2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:26-36,37-43,50-56,58-68,69-76,84-91 25. 2gre Deblocking aminopeptidase 0.0777545 d2gren1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like N:73-82,84-92,100-109,111-120,141-146,162-169 26. 1qo1 ATP SYNTHASE ALPHA CHAIN 0.0775916 d1qo1a_ ATP synthase ATP synthase ATP synthase A:26-36,37-43,50-56,58-68,69-76,84-91 27. 1bmf BOVINE MITOCHONDRIAL F1-ATPASE 0.0775855 d1bmfa2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:26-36,37-43,50-56,58-68,69-76,84-91 28. 1d8s F1 ATPASE (ALPHA SUBUNIT) 0.0775735 d1d8sa_ ATP synthase ATP synthase ATP synthase A:26-36,37-43,50-56,58-68,69-76,84-91 29. 1jnv ATP SYNTHASE ALPHA CHAIN 0.0775615 d1jnva_ ATP synthase ATP synthase ATP synthase A:26-36,37-43,50-56,58-68,69-76,84-91 30. 2f1l 16S rRNA processing protein 0.0771784 d2f1la2 16S rRNA processing protein RimM, N-terminal domain Translation proteins Reductase/isomerase/elongation factor common domain A:7-18,23-29,40-47,48-56,63-70,83-90 31. 2gre Deblocking aminopeptidase 0.0768285 d2grea1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like A:73-82,84-92,100-109,111-120,141-146,162-169 32. 2v7q ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0767519 Not in scop C:26-36,37-43,50-56,58-68,69-76,84-91 33. 2cf4 PROTEIN PH0519 0.0762253 Not in scop A:65-74,76-84,93-101,102-110,131-134,150-155 34. 1e1q BOVINE MITOCHONDRIAL F1-ATPASE 0.0761905 d1e1qb2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:26-35,38-43,50-56,58-68,69-76,86-91 35. 2jdi ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0760109 Not in scop C:26-36,37-43,50-56,58-68,69-76,84-91 36. 1e1r BOVINE MITOCHONDRIAL F1-ATPASE 0.0758438 d1e1ra2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:26-36,37-43,50-56,58-68,69-76,84-91 37. 1h8e BOVINE MITOCHONDRIAL F1-ATPASE 0.0757002 d1h8eb2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:26-35,38-43,50-56,58-68,69-76,86-91 38. 2gre Deblocking aminopeptidase 0.0755230 d2greg1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like G:73-82,84-92,101-109,111-120,141-146,162-169 39. 1e79 ATP SYNTHASE ALPHA CHAIN HEART ISOFORM 0.0754831 d1e79b2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:26-35,38-43,50-56,58-68,69-76,86-91 40. 2jdi ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0751936 Not in scop B:26-36,37-43,50-56,58-68,69-76,84-91 41. 2ck3 ATP SYNTHASE ALPHA CHAIN HEART ISOFORM 0.0751202 Not in scop C:26-36,37-43,50-56,58-68,69-76,84-91 42. 2gre Deblocking aminopeptidase 0.0750188 d2grej1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like J:73-82,84-92,100-109,111-120,141-146,164-169 43. 2hvy Small nucleolar rnp similar to gar1 0.0749850 Not in scop B:1-12,14-22,26-33,35-47,49-59,68-73 44. 2gre Deblocking aminopeptidase 0.0749794 d2greh1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like H:73-82,84-92,100-109,111-120,141-146,162-169 45. 1e79 ATP SYNTHASE ALPHA CHAIN HEART ISOFORM 0.0747552 d1e79c2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like C:26-36,37-43,50-56,58-68,69-76,84-91 46. 2gre Deblocking aminopeptidase 0.0747272 d2gree1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like E:73-82,84-92,100-109,111-120,141-146,164-169 47. 1jnv ATP SYNTHASE ALPHA CHAIN 0.0746826 d1jnvb_ ATP synthase ATP synthase ATP synthase B:26-36,37-43,50-56,58-68,69-76,84-91 48. 1d8s F1 ATPASE (ALPHA SUBUNIT) 0.0746770 d1d8sb_ ATP synthase ATP synthase ATP synthase B:26-36,37-43,50-56,58-68,69-76,84-91 49. 1h8h BOVINE MITOCHONDRIAL F1-ATPASE 0.0746157 d1h8hc2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like C:26-36,37-43,50-56,58-68,69-76,84-91 50. 1sky F1-ATPASE 0.0745823 d1skyb2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:26-36,37-43,50-56,58-68,69-77,84-91 51. 2v7q ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0745323 Not in scop A:26-36,37-43,50-56,58-68,69-77,84-91 52. 1ohh ATP SYNTHASE ALPHA CHAIN HEART ISOFORM, MITOC 0.0745045 d1ohhc2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like C:26-36,37-43,50-56,58-68,69-76,84-91 53. 2f1m Acriflavine resistance protein A 0.0744934 Not in scop D:54-63,210-219,241-249,257-261,273-282,289-297 54. 2gre Deblocking aminopeptidase 0.0742446 d2grem1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like M:73-82,84-92,101-109,111-120,141-146,164-169 55. 2hld ATP synthase alpha chain, mitochondrial 0.0742115 Not in scop L:28-38,39-45,52-58,60-70,71-79,86-93 56. 2gre Deblocking aminopeptidase 0.0742115 d2gred1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like D:73-82,84-92,100-109,111-120,141-146,164-169 57. 2gre Deblocking aminopeptidase 0.0741345 d2grei1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like I:73-82,84-92,100-109,111-120,141-146,164-169 58. 1jnv ATP SYNTHASE ALPHA CHAIN 0.0740357 d1jnvc_ ATP synthase ATP synthase ATP synthase C:26-36,37-43,50-56,58-68,69-76,84-91 59. 2gre Deblocking aminopeptidase 0.0740357 d2grel1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like L:73-82,84-92,100-109,111-120,141-146,164-169 60. 1h8e BOVINE MITOCHONDRIAL F1-ATPASE 0.0739153 d1h8ec2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like C:26-36,37-43,50-56,58-68,69-76,84-91 61. 1nbm F1-ATPASE 0.0738771 d1nbmc2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like C:26-36,37-43,50-56,58-68,69-76,84-91 62. 2gre Deblocking aminopeptidase 0.0738771 d2greo1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like O:73-82,84-92,100-109,111-120,141-146,164-169 63. 1nbm F1-ATPASE 0.0738443 d1nbmb2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:26-36,37-43,50-56,58-68,69-76,84-91 64. 2jj2 ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0738171 Not in scop C:26-36,37-43,50-56,58-68,69-76,84-91 65. 1h8h BOVINE MITOCHONDRIAL F1-ATPASE 0.0734214 d1h8ha2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:26-36,37-43,50-56,58-68,69-76,84-91 66. 2jj1 ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0734107 Not in scop C:26-36,37-43,50-56,58-68,69-76,84-91 67. 1e1q BOVINE MITOCHONDRIAL F1-ATPASE 0.0733676 d1e1qc2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like C:26-36,37-43,50-56,58-68,69-76,84-91 68. 1w0j ATP SYNTHASE ALPHA CHAIN HEART ISOFORM, MITOC 0.0732654 d1w0jc2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like C:26-36,37-43,50-56,58-68,69-76,84-91 69. 2gre Deblocking aminopeptidase 0.0731957 d2grec1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like C:73-82,84-92,100-109,111-120,141-146,164-169 70. 1e1q BOVINE MITOCHONDRIAL F1-ATPASE 0.0731529 d1e1qa2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:26-36,37-43,50-56,58-68,69-76,84-91 71. 2gre Deblocking aminopeptidase 0.0731101 d2gref1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like F:73-82,84-92,101-109,111-120,141-146,162-169 72. 2v7q ATP SYNTHASE SUBUNIT BETA 0.0730674 Not in scop D:9-18,19-25,32-39,45-54,56-64,73-78 73. 2jiz ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0730300 Not in scop J:26-36,37-43,50-56,58-68,69-76,84-91 74. 1ohh ATP SYNTHASE ALPHA CHAIN HEART ISOFORM, MITOC 0.0730140 d1ohha2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:26-36,37-43,50-56,58-68,69-76,84-91 75. 2jj2 ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0730087 Not in scop J:26-36,37-43,50-56,58-68,69-76,84-91 76. 1w0k ATP SYNTHASE ALPHA CHAIN HEART ISOFORM, MITOC 0.0729980 d1w0kc2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like C:26-36,37-43,50-56,58-68,69-76,84-91 77. 1nbm F1-ATPASE 0.0729395 d1nbma2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:26-36,37-43,50-56,58-68,69-76,84-91 78. 1vf7 Multidrug resistance protein mexA 0.0728120 d1vf7m_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins M:29-37,171-180,202-211,219-224,235-244,251-259 79. 2jj1 ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0727537 Not in scop J:26-36,37-43,50-56,58-68,69-77,84-91 80. 1h8e BOVINE MITOCHONDRIAL F1-ATPASE 0.0727537 d1h8ea2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:26-36,37-43,50-56,58-68,69-76,84-90 81. 2gre Deblocking aminopeptidase 0.0726164 d2grek1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like K:73-82,84-92,101-109,111-120,141-146,162-169 82. 2jdi ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0724848 Not in scop A:26-36,37-43,50-56,58-68,69-76,84-90 83. 2hld ATP synthase alpha chain, mitochondrial 0.0724375 Not in scop S:28-38,39-45,52-58,60-70,71-79,86-93 84. 2qe7 ATP synthase subunit alpha 0.0723956 Not in scop B:27-36,37-43,50-56,58-68,69-77,84-91 85. 2hld ATP synthase alpha chain, mitochondrial 0.0723956 Not in scop C:28-38,39-45,52-58,60-70,71-79,86-93 86. 2jj2 ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0723903 Not in scop B:26-35,37-43,50-56,58-68,69-76,86-91 87. 2gre Deblocking aminopeptidase 0.0723694 d2grep1 Deblocking aminopeptidase YhfE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like P:73-82,84-92,101-109,111-120,141-146,164-169 88. 2hld ATP synthase alpha chain, mitochondrial 0.0723484 Not in scop K:28-38,39-45,52-58,60-70,71-79,86-93 89. 1cow BOVINE MITOCHONDRIAL F1-ATPASE 0.0722909 d1cowd2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like D:9-18,19-25,34-39,45-54,56-64,71-78 90. 1kmh ATPase alpha subunit 0.0721813 d1kmha2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:27-37,38-44,52-57,59-69,70-77,87-93 91. 1w0j ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECUR 0.0721761 d1w0jf2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like F:9-18,19-25,32-39,45-54,56-64,73-78 92. 2jj1 ATP SYNTHASE SUBUNIT BETA 0.0720825 Not in scop F:9-18,19-25,32-39,45-54,56-64,73-78 93. 1w0j ATP SYNTHASE ALPHA CHAIN HEART ISOFORM, MITOC 0.0720098 d1w0ja2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:26-36,37-43,50-56,58-68,69-76,84-90 94. 2hld ATP synthase alpha chain, mitochondrial 0.0719891 Not in scop J:28-38,39-45,52-58,60-70,71-79,86-93 95. 1h8e BOVINE MITOCHONDRIAL F1-ATPASE 0.0718804 d1h8ed2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like D:9-18,19-25,32-39,45-54,56-64,73-78 96. 1xfo Frv operon protein FrvX 0.0717412 d1xfod1 Frv operon protein FrvX Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like D:72-81,83-91,99-107,111-120,138-143,158-165 97. 1n05 putative Riboflavin kinase 0.0716743 d1n05a_ Riboflavin kinase Riboflavin kinase-like Reductase/isomerase/elongation factor common domain A:22-31,43-49,63-72,73-82,95-100,110-118 98. 2jiz ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0716281 Not in scop H:26-36,37-43,50-56,58-68,69-76,84-90 99. 1t5e Multidrug resistance protein mexA 0.0714184 d1t5ej_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins J:29-36,171-180,202-211,219-224,233-244,251-259 100. 2hld ATP synthase alpha chain, mitochondrial 0.0714184 Not in scop B:28-38,39-45,52-58,60-70,71-79,86-93 101. 1fx0 ATP SYNTHASE ALPHA CHAIN 0.0713929 d1fx0a2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:27-37,38-44,51-57,59-69,70-77,87-93 102. 2jiz ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0713012 Not in scop A:26-36,37-43,50-56,58-68,69-76,84-90 103. 1e1r BOVINE MITOCHONDRIAL F1-ATPASE 0.0713012 d1e1rb2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:26-35,38-43,50-56,58-68,69-76,84-91 104. 1e79 ATP SYNTHASE ALPHA CHAIN HEART ISOFORM 0.0712301 d1e79a2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:26-36,37-43,50-56,58-68,69-76,84-90 105. 2jj1 ATP SYNTHASE SUBUNIT BETA 0.0711339 Not in scop L:9-18,19-25,32-39,45-54,56-64,73-78 106. 1w0j ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECUR 0.0709421 d1w0je2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like E:9-18,19-25,32-39,45-54,56-64,73-78 107. 1t5e Multidrug resistance protein mexA 0.0709320 d1t5ea_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins A:29-36,171-180,202-211,219-224,233-244,251-259 108. 1t5e Multidrug resistance protein mexA 0.0708115 d1t5eh_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins H:29-36,171-180,202-211,219-224,233-244,251-259 109. 2ck3 ATP SYNTHASE ALPHA CHAIN HEART ISOFORM 0.0707965 Not in scop A:26-36,37-43,50-56,58-68,69-76,84-90 110. 1efr BOVINE MITOCHONDRIAL F1-ATPASE 0.0707864 d1efra2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:26-36,37-43,50-56,58-68,69-76,84-90 111. 1t5e Multidrug resistance protein mexA 0.0707614 d1t5eb_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins B:29-36,171-180,202-211,219-224,233-244,251-259 112. 1t5e Multidrug resistance protein mexA 0.0706364 d1t5ed_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins D:29-36,171-180,202-211,219-224,233-244,251-259 113. 1w0k ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECUR 0.0706314 d1w0kd2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like D:9-18,19-25,32-39,45-54,56-64,73-78 114. 1t5e Multidrug resistance protein mexA 0.0706215 d1t5ee_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins E:29-36,171-180,202-211,219-224,233-244,251-259 115. 1h8h BOVINE MITOCHONDRIAL F1-ATPASE 0.0706215 d1h8hb2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:26-35,38-43,50-56,58-68,69-76,84-91 116. 1qo1 ATP SYNTHASE BETA CHAIN 0.0705467 d1qo1f_ ATP synthase ATP synthase ATP synthase F:9-18,19-25,32-39,45-54,56-64,72-78 117. 2jiz ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0705467 Not in scop I:26-35,38-43,50-56,58-68,69-76,84-91 118. 1bmf BOVINE MITOCHONDRIAL F1-ATPASE 0.0705418 d1bmff2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like F:9-18,19-25,32-39,45-54,56-64,72-78 119. 1d8s F1 ATPASE (BETA SUBUNIT) 0.0705368 d1d8sf_ ATP synthase ATP synthase ATP synthase F:9-18,19-25,32-39,45-54,56-64,72-78 120. 2j5u MREC PROTEIN 0.0705268 Not in scop B:116-126,133-141,147-154,155-166,167-174,268-275 121. 1jnv ATP SYNTHASE BETA CHAIN 0.0705119 d1jnvf_ ATP synthase ATP synthase ATP synthase F:9-18,19-25,32-39,45-54,56-64,72-78 122. 1t5e Multidrug resistance protein mexA 0.0704622 d1t5el_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins L:29-36,171-180,202-211,219-224,233-244,251-259 123. 2jiz ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0703581 Not in scop B:26-35,38-43,50-56,58-68,69-76,84-91 124. 1t5e Multidrug resistance protein mexA 0.0702988 d1t5ek_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins K:29-36,171-180,202-211,219-224,233-244,251-259 125. 1t5e Multidrug resistance protein mexA 0.0702988 d1t5ei_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins I:29-37,171-180,202-211,219-224,233-244,251-259 126. 2hld ATP synthase alpha chain, mitochondrial 0.0702839 Not in scop T:28-38,39-45,52-58,60-70,71-79,86-93 127. 1t5e Multidrug resistance protein mexA 0.0702445 d1t5eg_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins G:29-36,171-180,202-211,219-224,233-244,251-259 128. 1t5e Multidrug resistance protein mexA 0.0701557 d1t5em_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins M:29-36,171-180,202-211,219-224,233-244,251-259 129. 1t5e Multidrug resistance protein mexA 0.0701508 d1t5ef_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins F:29-36,171-180,202-211,219-224,233-244,251-259 130. 2hld ATP synthase beta chain, mitochondrial 0.0700476 Not in scop E:9-18,19-25,33-42,43-55,57-65,72-79 131. 2hld ATP synthase beta chain, mitochondrial 0.0699252 Not in scop N:9-18,19-25,33-42,43-55,57-65,72-79 132. 1vf7 Multidrug resistance protein mexA 0.0698470 d1vf7d_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins D:28-36,171-180,202-211,219-224,235-244,251-260 133. 1t5e Multidrug resistance protein mexA 0.0698227 d1t5ec_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins C:29-36,171-180,202-211,219-224,233-244,251-259 134. 2jj1 ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0697691 Not in scop A:26-36,37-43,50-56,58-68,69-77,84-90 135. 1ohh ATP SYNTHASE ALPHA CHAIN HEART ISOFORM, MITOC 0.0695314 d1ohhb2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:26-35,38-43,50-56,58-68,69-76,84-91 136. 2hld ATP synthase beta chain, mitochondrial 0.0695120 Not in scop W:9-18,19-25,33-42,43-55,57-65,72-79 137. 2jj1 ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0694830 Not in scop B:26-35,38-43,50-56,58-68,69-76,84-91 138. 1w0j ATP SYNTHASE ALPHA CHAIN HEART ISOFORM, MITOC 0.0693866 d1w0jb2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:26-35,38-43,50-56,58-68,69-76,84-91 139. 1efr BOVINE MITOCHONDRIAL F1-ATPASE 0.0693289 d1efrf2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like F:9-18,19-25,32-39,45-54,56-64,72-78 140. 2v7q ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0691659 Not in scop B:26-35,38-43,50-56,58-68,69-77,84-91 141. 2jj2 ATP SYNTHASE SUBUNIT BETA 0.0691515 Not in scop M:9-18,19-25,32-39,45-54,56-64,72-78 142. 2jj1 ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0690751 Not in scop H:26-36,37-43,50-56,58-68,69-77,84-90 143. 1e1q BOVINE MITOCHONDRIAL F1-ATPASE 0.0689941 d1e1qf2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like F:9-18,19-25,32-39,45-54,56-64,72-78 144. 1h8e BOVINE MITOCHONDRIAL F1-ATPASE 0.0689513 d1h8ee2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like E:9-18,19-25,32-39,45-54,56-64,72-78 145. 2qe7 ATP synthase subunit beta 0.0689180 Not in scop E:2-11,12-18,26-33,39-49,51-58,66-74 146. 2ck3 ATP SYNTHASE ALPHA CHAIN HEART ISOFORM 0.0689037 Not in scop B:26-35,37-43,50-56,58-68,69-76,84-91 147. 2jj2 ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0687805 Not in scop I:26-35,37-43,50-56,58-68,69-76,84-91 148. 2hld ATP synthase beta chain, mitochondrial 0.0685589 Not in scop D:9-18,19-25,33-42,43-55,57-65,73-79 149. 2jj1 ATP SYNTHASE SUBUNIT ALPHA HEART ISOFORM 0.0684697 Not in scop I:26-35,37-43,50-56,58-68,69-76,84-91 150. 2j5u MREC PROTEIN 0.0683901 Not in scop A:115-126,133-141,147-154,155-166,167-174,268-276 151. 2hld ATP synthase beta chain, mitochondrial 0.0683107 Not in scop V:9-18,19-25,33-42,43-55,57-65,73-79 152. 2jiz ATP SYNTHASE SUBUNIT BETA 0.0681245 Not in scop L:9-18,19-25,32-39,45-54,56-64,72-78 153. 1w0k ATP SYNTHASE ALPHA CHAIN HEART ISOFORM, MITOC 0.0681013 d1w0kb2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:26-35,38-43,50-56,58-68,69-76,84-91 154. 2hld ATP synthase beta chain, mitochondrial 0.0678841 Not in scop M:9-18,19-25,33-42,43-55,57-64,72-79 155. 2qe7 ATP synthase subunit beta 0.0678334 Not in scop D:2-11,12-18,26-33,39-49,51-59,66-74 156. 1fx0 ATP SYNTHASE BETA CHAIN 0.0677461 d1fx0b2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:19-28,29-35,43-50,61-70,72-80,89-94 157. 2hld ATP synthase beta chain, mitochondrial 0.0675174 Not in scop O:9-18,19-25,33-42,43-55,57-65,72-79 158. 1t6x riboflavin kinase/FMN adenylyltransferase 0.0673854 d1t6xb1 Riboflavin kinase domain of bifunctional FAD synthetase Riboflavin kinase-like Reductase/isomerase/elongation factor common domain B:460-467,480-485,495-505,507-518,528-535,544-552 159. 2qe7 ATP synthase subunit beta 0.0672721 Not in scop F:2-11,12-18,26-33,39-49,51-59,67-74 160. 2f1m Acriflavine resistance protein A 0.0672359 Not in scop B:54-62,210-219,242-249,257-260,271-282,289-297 161. 1qo1 ATP SYNTHASE BETA CHAIN 0.0670781 d1qo1d_ ATP synthase ATP synthase ATP synthase D:9-18,19-25,32-39,45-54,56-64,71-78 162. 1bmf BOVINE MITOCHONDRIAL F1-ATPASE 0.0670781 d1bmfd2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like D:9-18,19-25,32-39,45-54,56-64,71-78 163. 1jnv ATP SYNTHASE BETA CHAIN 0.0670691 d1jnvd_ ATP synthase ATP synthase ATP synthase D:9-18,19-25,32-39,45-54,56-64,71-78 164. 1d8s F1 ATPASE (BETA SUBUNIT) 0.0670556 d1d8sd_ ATP synthase ATP synthase ATP synthase D:9-18,19-25,32-39,45-54,56-64,71-78 165. 2hld ATP synthase beta chain, mitochondrial 0.0670466 Not in scop X:9-18,19-25,33-42,43-55,57-65,72-79 166. 1s4m riboflavin kinase/FMN adenylyltransferase 0.0669165 d1s4mb1 Riboflavin kinase domain of bifunctional FAD synthetase Riboflavin kinase-like Reductase/isomerase/elongation factor common domain B:460-467,480-485,495-505,507-517,529-535,544-552 167. 2hld ATP synthase beta chain, mitochondrial 0.0668852 Not in scop F:9-18,19-25,33-42,43-55,57-64,72-79 168. 2qe7 ATP synthase subunit alpha 0.0668226 Not in scop A:28-36,37-43,50-56,58-68,69-77,86-91 169. 1kmh ATPase beta subunit 0.0667022 d1kmhb2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:19-28,29-35,43-50,61-70,72-80,88-94 170. 1t6z riboflavin kinase/FMN adenylyltransferase 0.0665513 d1t6zb1 Riboflavin kinase domain of bifunctional FAD synthetase Riboflavin kinase-like Reductase/isomerase/elongation factor common domain B:460-467,480-485,495-505,507-518,528-535,544-552 171. 2i1l Riboflavin kinase/FMN adenylyltransferase 0.0664275 d2i1lb1 Riboflavin kinase domain of bifunctional FAD synthetase Riboflavin kinase-like Reductase/isomerase/elongation factor common domain B:460-467,480-485,495-505,507-517,529-535,544-552 172. 1efr BOVINE MITOCHONDRIAL F1-ATPASE 0.0662032 d1efrd2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like D:9-18,19-25,32-39,45-54,56-64,71-79 173. 1h8e BOVINE MITOCHONDRIAL F1-ATPASE 0.0658631 d1h8ef2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like F:9-18,19-25,32-39,45-54,56-64,71-78 174. 1h8h BOVINE MITOCHONDRIAL F1-ATPASE 0.0658068 d1h8hf2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like F:9-18,19-25,32-39,45-54,56-64,71-78 175. 2v7q ATP SYNTHASE SUBUNIT BETA 0.0657462 Not in scop F:9-18,19-25,32-39,45-54,56-64,71-78 176. 2fvg endoglucanase 0.0657419 d2fvga1 Endoglucanase TM1049 Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like A:64-73,75-83,91-98,99-107,124-129,143-150 177. 2ey4 small nucleolar rnp similar to gar1 0.0657160 d2ey4d1 Gar1 homolog PF1791 Translation proteins Reductase/isomerase/elongation factor common domain D:1-12,14-22,27-33,35-42,49-58,68-73 178. 1h8h BOVINE MITOCHONDRIAL F1-ATPASE 0.0657117 d1h8hd2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like D:9-18,19-25,32-39,45-54,56-64,71-78 179. 2jj2 ATP SYNTHASE SUBUNIT BETA 0.0655867 Not in scop F:9-18,19-25,32-39,45-54,56-64,71-78 180. 1bmf BOVINE MITOCHONDRIAL F1-ATPASE 0.0655437 d1bmfe2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like E:9-18,19-25,32-39,45-54,56-64,71-78 181. 1qo1 ATP SYNTHASE BETA CHAIN 0.0655394 d1qo1e_ ATP synthase ATP synthase ATP synthase E:9-18,19-25,32-39,45-54,56-64,71-78 182. 1d8s F1 ATPASE (BETA SUBUNIT) 0.0655351 d1d8se_ ATP synthase ATP synthase ATP synthase E:9-18,19-25,32-39,45-54,56-64,71-78 183. 1jnv ATP SYNTHASE BETA CHAIN 0.0655008 d1jnve_ ATP synthase ATP synthase ATP synthase E:9-18,19-25,32-39,45-54,56-64,71-78 184. 1mrz Riboflavin kinase/FMN adenylyltransferase 0.0654279 d1mrzb1 Riboflavin kinase domain of bifunctional FAD synthetase Riboflavin kinase-like Reductase/isomerase/elongation factor common domain B:460-467,480-485,495-505,507-518,528-535,544-552 185. 1e1r BOVINE MITOCHONDRIAL F1-ATPASE 0.0654236 d1e1rd2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like D:9-18,19-25,32-39,45-54,56-64,71-78 186. 2jdi ATP SYNTHASE SUBUNIT BETA 0.0653723 d2jdif2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like F:9-18,19-25,32-39,45-54,56-64,71-78 187. 1h8h BOVINE MITOCHONDRIAL F1-ATPASE 0.0653680 d1h8he2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like E:9-18,19-25,32-39,45-54,56-64,71-78 188. 2jj1 ATP SYNTHASE SUBUNIT BETA 0.0653125 Not in scop D:9-18,19-25,32-39,45-54,56-64,71-78 189. 2jj1 ATP SYNTHASE SUBUNIT BETA 0.0653083 Not in scop M:9-18,19-25,32-39,45-54,56-64,71-78 190. 1t6y riboflavin kinase/FMN adenylyltransferase 0.0652656 d1t6yb1 Riboflavin kinase domain of bifunctional FAD synthetase Riboflavin kinase-like Reductase/isomerase/elongation factor common domain B:460-467,480-485,495-505,507-518,528-535,544-552 191. 2qn6 Translation initiation factor 2 gamma subunit 0.0652103 Not in scop A:213-222,235-244,250-256,271-282,294-300,312-319 192. 1e1q BOVINE MITOCHONDRIAL F1-ATPASE 0.0651339 d1e1qe2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like E:9-18,19-25,32-39,45-54,56-64,71-78 193. 1ohh ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL 0.0650407 d1ohhd2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like D:9-18,19-25,32-39,45-54,56-64,71-78 194. 2ck3 ATP SYNTHASE BETA CHAIN 0.0649815 d2ck3f2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like F:9-18,19-25,32-39,45-54,56-64,71-78 195. 1wb2 TRANSLATION ELONGATION FACTOR SELB 0.0649604 d1wb2c1 Elongation factor SelB, domains 2 and 4 Translation proteins Reductase/isomerase/elongation factor common domain C:186-191,200-209,214-222,223-230,246-254,264-268 196. 2jiz ATP SYNTHASE SUBUNIT BETA 0.0649519 Not in scop D:9-18,19-25,32-39,45-54,56-64,71-78 197. 2jiz ATP SYNTHASE SUBUNIT BETA 0.0649140 Not in scop F:9-18,19-25,32-39,45-54,56-64,71-78 198. 1e79 ATP SYNTHASE BETA CHAIN 0.0649013 d1e79e2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like E:9-18,19-25,32-39,45-54,56-64,71-78 199. 2jj2 ATP SYNTHASE SUBUNIT BETA 0.0648550 Not in scop D:9-18,19-25,32-39,45-54,56-64,71-78 200. 1e1r BOVINE MITOCHONDRIAL F1-ATPASE 0.0648508 d1e1re2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like E:9-18,19-25,32-39,45-54,56-64,71-78 201. 3cw2 Translation initiation factor 2 subunit gamma 0.0648130 Not in scop B:213-222,235-244,251-256,271-282,294-300,314-319 202. 2qmu Translation initiation factor 2 gamma subunit 0.0648046 Not in scop A:213-222,235-244,250-256,271-282,294-300,312-319 203. 2qf5 Cell shape determining protein MreC 0.0647752 Not in scop A:110-122,128-136,144-149,150-161,162-169,264-272 204. 1e1q BOVINE MITOCHONDRIAL F1-ATPASE 0.0647668 d1e1qd2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like D:9-18,19-25,32-39,45-54,56-64,71-78 205. 2jiz ATP SYNTHASE SUBUNIT BETA 0.0647459 Not in scop M:9-18,19-25,32-39,45-54,56-64,71-78 206. 2ck3 ATP SYNTHASE BETA CHAIN 0.0647333 d2ck3e2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like E:9-18,19-25,32-39,45-54,56-64,71-78 207. 1efr BOVINE MITOCHONDRIAL F1-ATPASE 0.0647291 d1efre2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like E:9-18,19-25,32-39,45-54,56-64,71-78 208. 2jj1 ATP SYNTHASE SUBUNIT BETA 0.0646621 Not in scop K:9-18,19-25,32-39,45-54,56-64,71-78 209. 1e1r BOVINE MITOCHONDRIAL F1-ATPASE 0.0646496 d1e1rf2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like F:9-18,19-25,32-39,45-54,56-64,71-78 210. 1ohh ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL 0.0646162 d1ohhe2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like E:9-18,19-25,32-39,45-54,56-64,71-78 211. 1vf7 Multidrug resistance protein mexA 0.0646037 d1vf7i_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins I:28-36,171-180,202-211,219-224,233-244,251-260 212. 2jj1 ATP SYNTHASE SUBUNIT BETA 0.0645245 Not in scop E:9-18,19-25,32-39,45-54,56-64,71-78 213. 1cow BOVINE MITOCHONDRIAL F1-ATPASE 0.0645161 d1cowe2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like E:9-18,19-25,32-39,45-54,56-64,71-78 214. 1w0k ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECUR 0.0645161 d1w0kf2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like F:9-18,19-25,32-39,45-54,56-64,71-78 215. 1e79 ATP SYNTHASE BETA CHAIN 0.0645120 d1e79f2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like F:9-18,19-25,32-39,45-54,56-64,71-78 216. 1nbm F1-ATPASE 0.0644912 d1nbmd2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like D:9-18,19-26,32-39,45-54,56-64,71-78 217. 1vf7 Multidrug resistance protein mexA 0.0644787 d1vf7f_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins F:28-36,171-180,202-211,219-224,234-244,251-260 218. 1cow BOVINE MITOCHONDRIAL F1-ATPASE 0.0644745 d1cowf2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like F:9-18,19-25,32-39,45-54,56-64,72-79 219. 1nbm F1-ATPASE 0.0644247 d1nbme2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like E:9-18,19-25,32-39,45-54,56-64,71-78 220. 2jdi ATP SYNTHASE SUBUNIT BETA 0.0644081 d2jdie2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like E:9-18,19-25,32-39,45-54,56-64,71-78 221. 2jj2 ATP SYNTHASE SUBUNIT BETA 0.0643252 Not in scop E:9-18,19-25,32-39,45-54,56-64,71-78 222. 2jiz ATP SYNTHASE SUBUNIT BETA 0.0642797 Not in scop K:9-18,19-25,32-39,45-54,56-64,71-78 223. 2jj2 ATP SYNTHASE SUBUNIT BETA 0.0642550 Not in scop K:9-18,19-25,32-39,45-54,56-64,71-78 224. 2jdi ATP SYNTHASE SUBUNIT BETA 0.0641766 d2jdid2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like D:9-18,19-25,32-39,45-54,56-64,71-78 225. 1e79 ATP SYNTHASE BETA CHAIN 0.0641437 d1e79d2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like D:9-18,19-25,32-39,45-54,56-64,71-78 226. 2ck3 ATP SYNTHASE BETA CHAIN 0.0641313 d2ck3d2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like D:9-18,19-25,32-39,45-54,56-64,71-78 227. 1w0j ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECUR 0.0639672 d1w0jd2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like D:9-18,19-25,32-39,45-54,56-64,71-78 228. 2jj2 ATP SYNTHASE SUBUNIT BETA 0.0639141 Not in scop L:9-18,19-25,32-39,45-54,56-64,71-78 229. 1jny Elongation factor 1-alpha 0.0637755 d1jnya1 Elongation factor eEF-1alpha, domain 2 Translation proteins Reductase/isomerase/elongation factor common domain A:232-243,247-256,262-269,270-277,292-301,309-315 230. 1w0k ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECUR 0.0637471 d1w0ke2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like E:9-18,19-25,32-39,45-54,56-64,71-78 231. 2f43 ATP synthase beta chain, mitochondrial 0.0637389 d2f43b2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:9-18,19-25,32-39,45-54,56-64,71-78 232. 1vf7 Multidrug resistance protein mexA 0.0635930 d1vf7b_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins B:28-36,171-180,202-211,219-224,235-244,251-260 233. 1vf7 Multidrug resistance protein mexA 0.0634719 d1vf7l_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins L:28-36,171-180,202-211,219-224,233-244,251-260 234. 1ylo hypothetical protein SF2450 0.0629208 d1yloe1 Aminopeptidase YpdE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like E:66-75,77-85,93-102,104-117,118-127,142-149 235. 2jiz ATP SYNTHASE SUBUNIT BETA 0.0628812 Not in scop E:9-18,19-25,32-39,45-54,56-64,71-78 236. 2elf Protein translation elongation factor 1A 0.0628101 Not in scop A:173-182,188-196,202-209,210-222,231-241,249-255 237. 2f1m Acriflavine resistance protein A 0.0626056 Not in scop C:54-62,210-220,240-249,257-261,271-282,289-298 238. 2qf4 Cell shape determining protein MreC 0.0624922 Not in scop B:109-122,128-136,144-149,150-161,162-169,264-272 239. 1ylo hypothetical protein SF2450 0.0624220 d1yloc1 Aminopeptidase YpdE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like C:66-75,77-85,93-102,104-117,118-127,142-149 240. 1ylo hypothetical protein SF2450 0.0623791 d1ylod1 Aminopeptidase YpdE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like D:66-75,77-85,93-102,104-117,118-127,142-149 241. 1ylo hypothetical protein SF2450 0.0623286 d1ylob1 Aminopeptidase YpdE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like B:66-75,77-85,93-102,104-117,118-127,142-149 242. 2qe7 ATP synthase subunit alpha 0.0621543 Not in scop C:28-36,37-43,50-56,58-68,69-77,83-91 243. 2pmd Translation initiation factor 2 gamma subunit 0.0621350 Not in scop B:213-222,235-244,250-257,271-282,294-300,312-319 244. 3cw2 Translation initiation factor 2 subunit gamma 0.0621311 Not in scop E:213-222,235-244,250-256,271-282,294-300,313-319 245. 1ylo hypothetical protein SF2450 0.0621234 d1ylof1 Aminopeptidase YpdE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like F:66-75,77-85,93-102,104-117,118-127,142-149 246. 1ylo hypothetical protein SF2450 0.0620810 d1yloa1 Aminopeptidase YpdE Aminopeptidase/glucanase lid domain Domain of alpha and beta subunits of F1 ATP synthase-like A:66-75,77-85,93-102,104-117,118-127,142-149 247. 2f43 ATP synthase alpha chain, mitochondrial 0.0620347 Not in scop A:26-36,37-43,50-56,58-68,69-76,86-94 248. 2pmd Translation initiation factor 2 gamma subunit 0.0618927 Not in scop A:213-222,235-244,250-257,271-282,294-300,312-319 249. 2v7q ATP SYNTHASE SUBUNIT BETA 0.0618620 Not in scop E:10-18,19-25,32-39,45-54,56-64,73-78 250. 1ohh ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL 0.0618544 d1ohhf2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like F:10-18,19-25,32-39,45-54,56-64,72-78 251. 1wb3 TRANSLATION ELONGATION FACTOR SELB 0.0618123 d1wb3c1 Elongation factor SelB, domains 2 and 4 Translation proteins Reductase/isomerase/elongation factor common domain C:186-191,199-209,214-222,223-235,246-254,264-268 252. 1vf7 Multidrug resistance protein mexA 0.0618047 d1vf7j_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins J:28-36,171-180,202-211,219-224,233-244,251-260 253. 1mab PROTEIN (F1-ATPASE ALPHA CHAIN) 0.0615271 d1maba2 F1 ATP synthase alpha subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like A:26-36,37-43,50-56,58-68,69-76,86-94 254. 1d1n INITIATION FACTOR 2 0.0614893 d1d1na_ Initiation factor IF2/eIF5b, domains 2 and 4 Translation proteins Reductase/isomerase/elongation factor common domain A:146-159,163-172,179-186,193-201,212-219,228-234 255. 1kjz eIF2gamma 0.0614213 d1kjza1 Initiation factor eIF2 gamma subunit, domain II Translation proteins Reductase/isomerase/elongation factor common domain A:209-218,231-240,246-253,267-278,290-296,308-314 256. 2r9v ATP synthase subunit alpha 0.0612257 Not in scop A:26-35,37-43,49-57,58-65,70-77,87-93 257. 1s0u Translation initiation factor 2 gamma subunit 0.0612033 d1s0ua1 Initiation factor eIF2 gamma subunit, domain II Translation proteins Reductase/isomerase/elongation factor common domain A:236-245,258-267,273-280,294-305,317-323,335-341 258. 1kk1 eIF2gamma 0.0610836 d1kk1a1 Initiation factor eIF2 gamma subunit, domain II Translation proteins Reductase/isomerase/elongation factor common domain A:209-218,231-240,246-253,267-278,290-296,308-314 259. 2rfk Small nucleolar rnp similar to gar1 0.0610799 Not in scop C:1-12,14-21,26-33,35-42,50-57,66-74 260. 1kk2 eIF2gamma 0.0610650 d1kk2a1 Initiation factor eIF2 gamma subunit, domain II Translation proteins Reductase/isomerase/elongation factor common domain A:209-218,231-240,246-253,267-278,290-296,308-314 261. 1kk3 eIF2gamma 0.0608310 d1kk3a1 Initiation factor eIF2 gamma subunit, domain II Translation proteins Reductase/isomerase/elongation factor common domain A:209-218,231-240,246-253,267-278,290-296,308-314 262. 1mab PROTEIN (F1-ATPASE BETA CHAIN) 0.0607497 d1mabb2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like B:9-18,19-25,32-40,45-54,56-64,71-78 263. 3cw2 Translation initiation factor 2 subunit gamma 0.0606796 Not in scop A:213-222,235-244,250-256,271-282,294-300,312-319 264. 2aho Translation initiation factor 2 gamma subunit 0.0606355 d2ahoa1 Initiation factor eIF2 gamma subunit, domain II Translation proteins Reductase/isomerase/elongation factor common domain A:213-222,235-244,250-257,271-282,294-300,312-319 265. 1t6y riboflavin kinase/FMN adenylyltransferase 0.0601974 d1t6ya1 Riboflavin kinase domain of bifunctional FAD synthetase Riboflavin kinase-like Reductase/isomerase/elongation factor common domain A:160-167,180-185,195-205,207-219,227-235,242-252 266. 1aip ELONGATION FACTOR TU 0.0601142 d1aipe1 Elongation factor Tu (EF-Tu), domain 2 Translation proteins Reductase/isomerase/elongation factor common domain E:221-226,234-244,250-257,262-273,282-291,300-306 267. 1aip ELONGATION FACTOR TU 0.0600492 d1aipa1 Elongation factor Tu (EF-Tu), domain 2 Translation proteins Reductase/isomerase/elongation factor common domain A:221-226,234-244,250-257,262-273,282-291,300-306 268. 1kk0 eIF2gamma 0.0599484 d1kk0a1 Initiation factor eIF2 gamma subunit, domain II Translation proteins Reductase/isomerase/elongation factor common domain A:209-218,231-240,247-253,267-278,290-296,308-314 269. 1zm9 Elongation factor 2 0.0595238 d1zm9e1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain E:377-383,393-402,407-415,425-433,450-458,465-471 270. 2plf Translation initiation factor 2 gamma subunit 0.0594424 Not in scop A:213-222,235-244,250-257,271-282,294-300,314-319 271. 2ywh GTP-binding protein LepA 0.0594142 Not in scop A:193-198,207-216,222-229,230-243,254-262,273-279 272. 2p8y Elongation factor 2 0.0593754 d2p8yt1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain T:377-388,393-402,407-415,425-433,450-458,465-471 273. 2p8w Elongation factor 2 0.0593683 d2p8wt1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain T:377-388,393-402,407-415,425-433,450-458,465-471 274. 2p8z Elongation factor 2 0.0593648 d2p8zt1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain T:377-388,393-402,407-415,425-433,450-458,465-471 275. 3b78 Elongation factor 2 0.0592593 Not in scop E:378-383,393-402,407-415,425-433,450-458,465-471 276. 2hcj Protein chain elongation factor EF-Tu 0.0591856 Not in scop B:210-215,223-233,240-246,250-261,270-279,288-294 277. 2ywe GTP-binding protein lepA 0.0591191 Not in scop A:193-198,207-216,221-229,230-243,254-262,272-279 278. 1zm3 Elongation factor 2 0.0591017 d1zm3e1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain E:377-383,393-402,407-415,425-433,450-458,465-471 279. 3b82 Elongation factor 2 0.0590912 Not in scop E:378-383,393-402,407-415,425-433,450-458,465-471 280. 1zm9 Elongation factor 2 0.0590179 d1zm9c1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain C:377-390,393-402,407-415,425-433,450-458,465-471 281. 2bvn ELONGATION FACTOR TU 0.0590110 d2bvna1 Elongation factor Tu (EF-Tu), domain 2 Translation proteins Reductase/isomerase/elongation factor common domain A:210-215,224-233,239-246,250-261,270-279,288-294 282. 1aip ELONGATION FACTOR TU 0.0588824 d1aipb1 Elongation factor Tu (EF-Tu), domain 2 Translation proteins Reductase/isomerase/elongation factor common domain B:221-226,235-244,250-257,262-273,282-291,299-306 283. 1ha3 ELONGATION FACTOR TU 0.0588478 d1ha3a1 Elongation factor Tu (EF-Tu), domain 2 Translation proteins Reductase/isomerase/elongation factor common domain A:221-228,234-244,249-257,262-273,282-291,299-306 284. 1zm3 Elongation factor 2 0.0588166 d1zm3c1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain C:377-390,393-402,407-415,425-433,450-458,465-471 285. 1zm9 Elongation factor 2 0.0588062 d1zm9a1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain A:377-390,393-402,407-415,425-433,450-458,465-471 286. 1zm2 Elongation factor 2 0.0587406 d1zm2e1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain E:377-383,393-402,407-415,425-433,450-458,465-471 287. 2v31 UBIQUITIN-ACTIVATING ENZYME E1 X 0.0586579 Not in scop A:217-226,228-235,243-252,264-271,273-279,286-295 288. 2ywf GTP-binding protein lepA 0.0586545 Not in scop A:193-198,207-216,222-229,230-243,254-262,272-279 289. 1zm2 Elongation factor 2 0.0585652 d1zm2c1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain C:377-383,393-402,407-415,425-433,450-458,465-471 290. 1zm3 Elongation factor 2 0.0585343 d1zm3a1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain A:377-383,393-402,407-415,425-433,450-458,465-471 291. 1efu ELONGATION FACTOR TU 0.0584864 d1efua1 Elongation factor Tu (EF-Tu), domain 2 Translation proteins Reductase/isomerase/elongation factor common domain A:210-215,223-233,239-246,250-261,270-279,288-294 292. 1nbm F1-ATPASE 0.0584830 d1nbmf2 F1 ATP synthase beta subunit, domain 1 N-terminal domain of alpha and beta subunits of F1 ATP synthase Domain of alpha and beta subunits of F1 ATP synthase-like F:10-18,19-25,32-39,45-54,56-64,71-78 293. 1g7s TRANSLATION INITIATION FACTOR IF2/EIF5B 0.0583942 d1g7sa1 Initiation factor IF2/eIF5b, domains 2 and 4 Translation proteins Reductase/isomerase/elongation factor common domain A:231-242,246-255,262-269,270-283,305-312,320-327 294. 3b8h Elongation factor 2 0.0583635 Not in scop E:378-383,393-402,407-415,425-433,450-458,465-471 295. 2bvn ELONGATION FACTOR TU 0.0583635 d2bvnb1 Elongation factor Tu (EF-Tu), domain 2 Translation proteins Reductase/isomerase/elongation factor common domain B:210-215,223-233,239-246,250-261,270-279,288-294 296. 1exm ELONGATION FACTOR TU (EF-TU) 0.0583328 d1exma1 Elongation factor Tu (EF-Tu), domain 2 Translation proteins Reductase/isomerase/elongation factor common domain A:221-226,234-244,250-257,262-273,282-291,299-306 297. 2qf4 Cell shape determining protein MreC 0.0583328 Not in scop A:108-122,128-136,144-149,150-161,162-169,264-272 298. 1wb3 TRANSLATION ELONGATION FACTOR SELB 0.0583192 d1wb3b1 Elongation factor SelB, domains 2 and 4 Translation proteins Reductase/isomerase/elongation factor common domain B:186-191,200-209,216-222,223-235,244-254,266-268 299. 3b82 Elongation factor 2 0.0583090 Not in scop A:378-383,393-402,407-415,425-433,450-458,465-471 300. 3cpx Aminopeptidase, M42 family 0.0581869 Not in scop B:69-75,77-83,89-98,99-110,111-117,124-130 301. 1efu ELONGATION FACTOR TU 0.0581700 d1efuc1 Elongation factor Tu (EF-Tu), domain 2 Translation proteins Reductase/isomerase/elongation factor common domain C:210-215,223-233,240-246,250-261,270-279,288-294 302. 2gh8 Capsid protein 0.0581362 Not in scop C:422-431,436-444,496-506,524-530,548-553,558-568 303. 1mj1 Elongation Factor Tu 0.0581260 d1mj1a_ 70S ribosome functional complex Ribosome and ribosomal fragments Ribosome and ribosomal fragments A:221-226,234-244,249-257,262-273,282-291,299-306 304. 2ywg GTP-binding protein LepA 0.0581159 Not in scop A:193-198,207-216,222-229,230-243,254-262,272-279 305. 2zit Elongation factor 2 0.0581024 Not in scop A:378-383,393-402,407-415,425-433,450-458,465-471 306. 3b8h Elongation factor 2 0.0579441 Not in scop A:377-383,393-402,407-415,425-433,450-458,465-471 307. 1zm4 Elongation factor 2 0.0579341 d1zm4a1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain A:377-383,393-402,407-415,425-433,450-458,465-471 308. 1zm2 Elongation factor 2 0.0579240 d1zm2a1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain A:377-390,393-402,407-415,425-433,450-458,465-471 309. 2zit Elongation factor 2 0.0578704 Not in scop E:378-383,393-402,407-415,425-433,450-458,465-471 310. 1zm4 Elongation factor 2 0.0577367 d1zm4e1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain E:377-383,393-402,407-415,425-433,450-458,465-471 311. 1zm4 Elongation factor 2 0.0575705 d1zm4c1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain C:377-390,393-402,407-415,425-433,450-458,465-471 312. 3cpx Aminopeptidase, M42 family 0.0572213 Not in scop C:69-75,77-83,89-98,99-110,111-117,124-130 313. 3b8v Alanine racemase 0.0571135 Not in scop A:234-250,266-274,284-291,292-298,303-312,320-326 314. 1g7r TRANSLATION INITIATION FACTOR IF2/EIF5B 0.0570418 d1g7ra1 Initiation factor IF2/eIF5b, domains 2 and 4 Translation proteins Reductase/isomerase/elongation factor common domain A:231-242,246-255,262-269,270-284,305-312,320-327 315. 2b5o Ferredoxin--NADP reductase 0.0569736 Not in scop A:122-134,141-149,160-165,178-184,195-203,232-240 316. 1u2r Elongation factor 2 0.0569346 d1u2ra1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain A:377-390,393-402,407-415,425-433,450-458,465-471 317. 1vfs alanine racemase 0.0569022 d1vfsb1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like B:1249-1265,1281-1289,1301-1306,1307-1313,1318-1326,1334-1343 318. 3cpx Aminopeptidase, M42 family 0.0568796 Not in scop A:69-75,77-83,89-98,99-110,111-117,124-130 319. 2b5o Ferredoxin--NADP reductase 0.0566829 Not in scop B:122-134,141-149,160-165,178-184,195-203,232-240 320. 1wb3 TRANSLATION ELONGATION FACTOR SELB 0.0564557 d1wb3c2 Elongation factor SelB, domains 2 and 4 Translation proteins Reductase/isomerase/elongation factor common domain C:387-399,404-407,421-427,431-439,444-450,456-466 321. 1wb2 TRANSLATION ELONGATION FACTOR SELB 0.0564079 d1wb2b1 Elongation factor SelB, domains 2 and 4 Translation proteins Reductase/isomerase/elongation factor common domain B:186-191,199-209,216-222,223-230,244-254,266-268 322. 2hdn Elongation factor EF-Tu 0.0560978 Not in scop L:210-214,224-233,239-246,250-261,270-279,290-294 323. 2hdn Elongation factor EF-Tu 0.0560884 Not in scop F:210-214,224-233,239-246,250-261,270-279,290-294 324. 2hdn Elongation factor EF-Tu 0.0559347 Not in scop J:210-214,224-233,239-246,250-261,270-279,290-294 325. 3b8u Alanine racemase 0.0558098 Not in scop B:234-250,266-274,284-291,292-298,303-312,320-326 326. 2hdn Elongation factor EF-Tu 0.0557414 Not in scop H:210-214,224-233,239-246,250-261,270-279,290-294 327. 2p8x Elongation factor 2 0.0556514 d2p8xt1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain T:377-389,393-402,407-415,425-433,450-458,465-471 328. 1dg1 ELONGATION FACTOR TU 0.0554170 d1dg1h1 Elongation factor Tu (EF-Tu), domain 2 Translation proteins Reductase/isomerase/elongation factor common domain H:210-214,223-233,238-246,250-261,270-280,290-294 329. 2hdn Elongation factor EF-Tu 0.0552730 Not in scop B:210-214,223-233,239-246,250-261,270-279,290-294 330. 2hdn Elongation factor EF-Tu 0.0551572 Not in scop D:210-214,223-233,239-246,250-261,270-279,290-294 331. 1n06 PUTATIVE riboflavin kinase 0.0551177 d1n06a_ Riboflavin kinase Riboflavin kinase-like Reductase/isomerase/elongation factor common domain A:22-31,45-49,62-72,77-85,92-100,110-118 332. 1f60 ELONGATION FACTOR EEF1A 0.0549300 d1f60a1 Elongation factor eEF-1alpha, domain 2 Translation proteins Reductase/isomerase/elongation factor common domain A:244-254,258-267,274-280,282-293,303-310,320-327 333. 1ijf elongation factor 1-alpha 0.0547705 d1ijfa1 Elongation factor eEF-1alpha, domain 2 Translation proteins Reductase/isomerase/elongation factor common domain A:244-254,258-267,274-280,282-293,303-310,320-327 334. 1n08 putative riboflavin kinase 0.0547375 d1n08b_ Riboflavin kinase Riboflavin kinase-like Reductase/isomerase/elongation factor common domain B:23-31,45-49,62-72,77-85,92-100,110-118 335. 1efc PROTEIN (ELONGATION FACTOR) 0.0546777 d1efca1 Elongation factor Tu (EF-Tu), domain 2 Translation proteins Reductase/isomerase/elongation factor common domain A:210-214,223-233,240-246,250-261,270-279,290-294 336. 1xfc Alanine racemase 0.0545852 Not in scop B:250-263,280-290,302-307,308-314,319-328,337-343 337. 1dg1 ELONGATION FACTOR TU 0.0545584 d1dg1g1 Elongation factor Tu (EF-Tu), domain 2 Translation proteins Reductase/isomerase/elongation factor common domain G:210-214,223-233,239-246,250-261,270-280,290-294 338. 3cmm Ubiquitin-activating enzyme E1 1 0.0541477 Not in scop C:182-190,192-198,207-215,227-234,236-243,251-258 339. 1n07 PUTATIVE riboflavin kinase 0.0541067 d1n07b_ Riboflavin kinase Riboflavin kinase-like Reductase/isomerase/elongation factor common domain B:23-31,45-49,62-72,77-85,92-100,110-117 340. 1eft ELONGATION FACTOR TU 0.0538880 d1efta1 Elongation factor Tu (EF-Tu), domain 2 Translation proteins Reductase/isomerase/elongation factor common domain A:221-232,234-244,250-257,262-273,282-291,300-306 341. 2rjh Alanine racemase 0.0538561 Not in scop A:234-250,266-274,284-291,292-298,303-312,318-326 342. 2rjh Alanine racemase 0.0538213 Not in scop C:234-250,266-274,284-291,292-298,303-312,318-326 343. 2rjh Alanine racemase 0.0538184 Not in scop B:234-250,266-274,284-291,292-298,303-312,318-326 344. 2rjh Alanine racemase 0.0537461 Not in scop D:234-250,266-274,284-291,292-298,303-312,318-326 345. 2gh8 Capsid protein 0.0536021 Not in scop A:422-431,436-444,495-506,524-531,548-553,558-569 346. 3b8w Alanine racemase 0.0534902 Not in scop D:234-250,266-274,284-291,292-298,303-312,318-326 347. 3b8w Alanine racemase 0.0533874 Not in scop B:234-250,266-274,284-291,292-298,303-312,318-326 348. 3b8w Alanine racemase 0.0533732 Not in scop A:234-250,266-274,284-291,292-298,303-312,318-326 349. 2rjg Alanine racemase 0.0533732 Not in scop A:234-250,266-274,284-291,292-298,303-312,318-326 350. 3b8t Alanine racemase 0.0532964 Not in scop B:234-250,266-274,284-291,292-298,303-312,318-326 351. 3b8v Alanine racemase 0.0532396 Not in scop B:234-250,266-274,284-291,292-298,303-312,318-326 352. 2rjg Alanine racemase 0.0532255 Not in scop C:234-250,266-274,284-291,292-298,303-312,318-326 353. 3b8v Alanine racemase 0.0532255 Not in scop C:234-250,266-274,284-291,292-298,303-312,318-326 354. 3cmm Ubiquitin-activating enzyme E1 1 0.0531971 Not in scop A:182-190,192-198,207-215,227-234,236-243,251-258 355. 2rjg Alanine racemase 0.0531802 Not in scop D:234-250,266-274,284-291,292-298,303-312,318-326 356. 3b8v Alanine racemase 0.0531802 Not in scop D:234-250,266-274,284-291,292-298,303-312,318-326 357. 3b8u Alanine racemase 0.0531802 Not in scop D:234-250,266-274,284-291,292-298,303-312,318-326 358. 3b8t Alanine racemase 0.0531773 Not in scop A:234-250,266-274,284-291,292-298,303-312,318-326 359. 2rjg Alanine racemase 0.0531576 Not in scop B:234-250,266-274,284-291,292-298,303-312,318-326 360. 1xfc Alanine racemase 0.0530955 Not in scop A:250-266,282-290,302-307,308-314,319-327,337-343 361. 3b8u Alanine racemase 0.0529577 Not in scop A:234-250,266-274,284-291,292-298,303-312,318-326 362. 3b8t Alanine racemase 0.0528430 Not in scop D:234-250,266-274,284-291,292-298,303-312,318-326 363. 2c78 ELONGATION FACTOR TU-A 0.0528430 d2c78a1 Elongation factor Tu (EF-Tu), domain 2 Translation proteins Reductase/isomerase/elongation factor common domain A:221-232,234-244,250-257,262-273,282-291,300-306 364. 2glw 92aa long hypothetical protein 0.0525017 Not in scop A:3-13,15-19,31-44,45-58,60-64,76-89 365. 1n06 PUTATIVE riboflavin kinase 0.0524742 d1n06b_ Riboflavin kinase Riboflavin kinase-like Reductase/isomerase/elongation factor common domain B:23-31,45-49,62-72,77-85,92-100,110-118 366. 3b8u Alanine racemase 0.0523396 Not in scop C:234-250,266-274,284-291,292-298,303-312,318-325 367. 3b8h Elongation factor 2 0.0521921 Not in scop A:383-390,393-402,407-415,425-433,450-458,465-471 368. 1zm3 Elongation factor 2 0.0518726 d1zm3e1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain E:383-390,393-402,407-415,425-433,450-458,465-471 369. 1zm9 Elongation factor 2 0.0518592 d1zm9e1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain E:383-390,393-402,407-415,425-433,450-458,465-471 370. 1zm3 Elongation factor 2 0.0517384 d1zm3a1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain A:383-390,393-402,407-415,425-433,450-458,465-471 371. 1zm2 Elongation factor 2 0.0516929 d1zm2c1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain C:383-390,393-402,407-415,425-433,450-458,465-471 372. 1zm2 Elongation factor 2 0.0516502 d1zm2e1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain E:383-390,393-402,407-415,425-433,450-458,465-471 373. 1zm4 Elongation factor 2 0.0515490 d1zm4e1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain E:383-390,393-402,407-415,425-433,450-458,465-471 374. 3b82 Elongation factor 2 0.0515092 Not in scop A:383-390,393-402,407-415,425-433,450-458,465-471 375. 2zit Elongation factor 2 0.0514721 Not in scop A:383-390,393-402,407-415,425-433,450-458,465-471 376. 1gjr FERREDOXIN-NADP REDUCTASE 0.0513743 d1gjra1 Ferredoxin reductase (flavodoxin reductase) N-terminal domain Riboflavin synthase domain-like Reductase/isomerase/elongation factor common domain A:20-32,39-47,58-63,76-82,93-101,126-137 377. 1zm4 Elongation factor 2 0.0512978 d1zm4a1 Elongation factor 2 (eEF-2), domain II Translation proteins Reductase/isomerase/elongation factor common domain A:383-390,393-402,407-415,425-433,450-458,465-471 378. 3co8 Alanine racemase 0.0511091 Not in scop B:245-257,277-285,297-301,302-308,313-320,326-333 379. 3b82 Elongation factor 2 0.0509295 Not in scop E:383-390,393-402,407-415,425-433,450-458,465-471 380. 2gya 50S ribosomal protein L3 0.0508440 Not in scop B:3-10,20-29,104-113,174-181,185-191,199-206 381. 3b8h Elongation factor 2 0.0506688 Not in scop E:383-390,393-402,407-415,425-433,450-458,465-471 382. 3b78 Elongation factor 2 0.0505817 Not in scop E:383-390,393-402,407-415,425-433,450-458,465-471 383. 2zit Elongation factor 2 0.0505510 Not in scop E:383-390,393-402,407-415,425-433,450-458,465-471 384. 2gyc 50S ribosomal protein L3 0.0503246 Not in scop B:3-10,20-29,104-113,174-181,185-191,199-206 385. 1wb2 TRANSLATION ELONGATION FACTOR SELB 0.0500751 d1wb2a2 Elongation factor SelB, domains 2 and 4 Translation proteins Reductase/isomerase/elongation factor common domain A:387-401,402-408,420-428,429-441,442-450,455-467 386. 2zjq 50S ribosomal protein L3 0.0500551 Not in scop B:7-17,18-28,100-112,169-178,179-186,192-201 387. 1qg0 PROTEIN (FERREDOXIN:NADP+ REDUCTASE) 0.0496944 d1qg0b1 Ferredoxin reductase (flavodoxin reductase) N-terminal domain Riboflavin synthase domain-like Reductase/isomerase/elongation factor common domain B:1031-1042,1050-1060,1068-1073,1086-1092,1102-1111,1135-1146 388. 1wb1 TRANSLATION ELONGATION FACTOR SELB 0.0496524 d1wb1a2 Elongation factor SelB, domains 2 and 4 Translation proteins Reductase/isomerase/elongation factor common domain A:387-401,402-408,420-428,429-441,442-450,455-467 389. 1p85 50S ribosomal protein L3 0.0495221 d1p85b_ 70S ribosome functional complex Ribosome and ribosomal fragments Ribosome and ribosomal fragments B:3-9,20-29,103-113,174-181,185-191,197-206 390. 1p86 50S ribosomal protein L3 0.0492635 d1p86b_ 70S ribosome functional complex Ribosome and ribosomal fragments Ribosome and ribosomal fragments B:3-9,20-29,103-113,174-181,185-191,199-206 391. 3f1h 50S ribosomal protein L3 0.0489524 Not in scop E:7-17,18-28,99-112,169-178,179-186,192-201 392. 3f1f 50S ribosomal protein L3 0.0489261 Not in scop E:7-17,18-28,99-112,169-178,179-186,192-201 393. 3dll 50S ribosomal protein L3 0.0485979 Not in scop B:7-17,18-28,99-112,169-178,179-186,193-201 394. 1vs8 50S RIBOSOMAL PROTEIN L3 0.0485013 Not in scop D:4-9,21-28,105-117,161-181,185-191,197-206 395. 1wb3 TRANSLATION ELONGATION FACTOR SELB 0.0474361 d1wb3a2 Elongation factor SelB, domains 2 and 4 Translation proteins Reductase/isomerase/elongation factor common domain A:387-401,402-408,420-428,429-441,442-449,455-467 396. 2jl6 50S RIBOSOMAL PROTEIN L3 0.0470035 Not in scop E:7-17,18-28,98-115,169-178,179-186,192-201 397. 3cw2 Translation initiation factor 2 subunit gamma 0.0469881 Not in scop F:213-222,235-244,250-264,270-282,294-300,312-319 398. 2jl8 50S RIBOSOMAL PROTEIN L3 0.0469726 Not in scop E:7-17,18-28,98-115,169-178,179-186,192-201 399. 1s1i 60S ribosomal protein L3 0.0461510 d1s1ic_ 70S ribosome functional complex Ribosome and ribosomal fragments Ribosome and ribosomal fragments C:44-50,73-80,210-225,278-286,319-325,332-341 400. 1xqk Alanine racemase 0.0459643 Not in scop A:244-260,276-284,295-300,301-307,312-319,325-332 401. 1xql Alanine racemase 0.0458947 Not in scop A:244-260,276-284,295-300,301-307,312-319,325-332 402. 1epv ALANINE RACEMASE 0.0457247 d1epvb1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like B:244-259,273-284,295-300,301-307,312-319,325-332 403. 1l6f alanine racemase 0.0457226 d1l6fa1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like A:244-260,276-284,295-300,301-307,312-319,325-332 404. 1epv ALANINE RACEMASE 0.0456454 d1epva1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like A:244-259,273-284,295-300,301-307,312-319,325-332 405. 1sft ALANINE RACEMASE 0.0455976 d1sftb1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like B:244-259,273-284,295-300,301-307,312-319,325-332 406. 1sft ALANINE RACEMASE 0.0455976 d1sfta1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like A:244-259,273-284,295-300,301-307,312-319,325-332 407. 1l6f alanine racemase 0.0455104 d1l6fb1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like B:244-260,276-284,295-300,301-307,312-319,325-332 408. 2sfp PROTEIN (ALANINE RACEMASE) 0.0454980 d2sfpa1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like A:244-260,276-284,295-300,301-307,312-319,325-332 409. 1bd0 ALANINE RACEMASE 0.0454814 d1bd0a1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like A:244-260,276-284,295-300,301-307,312-319,325-332 410. 1bd0 ALANINE RACEMASE 0.0454690 d1bd0b1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like B:244-260,276-284,295-300,301-307,312-319,325-332 411. 1xql Alanine racemase 0.0453823 Not in scop B:244-260,276-284,295-300,301-307,312-319,325-332 412. 2sfp PROTEIN (ALANINE RACEMASE) 0.0453721 d2sfpb1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like B:244-260,276-284,295-300,301-307,312-319,325-332 413. 1xqk Alanine racemase 0.0453721 Not in scop B:244-260,276-284,295-300,301-307,312-319,325-332 414. 1niu Alanine Racemase 0.0452796 d1niua1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like A:244-259,273-284,295-300,301-307,312-319,325-332 415. 1l6g alanine racemase 0.0452100 d1l6ga1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like A:244-260,276-284,295-300,301-307,312-319,325-332 416. 1ftx ALANINE RACEMASE 0.0451692 d1ftxb1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like B:244-259,273-284,295-300,301-307,312-319,325-332 417. 1niu Alanine Racemase 0.0451671 d1niub1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like B:244-259,273-284,295-300,301-307,312-319,325-332 418. 1l6g alanine racemase 0.0451040 d1l6gb1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like B:244-259,273-284,295-300,301-307,312-319,325-332 419. 1ftx ALANINE RACEMASE 0.0450268 d1ftxa1 Alanine racemase Alanine racemase C-terminal domain-like Domain of alpha and beta subunits of F1 ATP synthase-like A:244-259,273-284,295-300,301-307,312-319,325-332 420. 3co8 Alanine racemase 0.0445911 Not in scop A:245-261,277-285,295-301,302-308,313-320,326-333 421. 1cy1 DNA TOPOISOMERASE I 0.0407448 d1cy1a_ DNA topoisomerase I, 67K N-terminal domain Prokaryotic type I DNA topoisomerase Prokaryotic type I DNA topoisomerase A:216-229,231-242,266-279,405-418,419-433,457-472 422. 3d5d 50S ribosomal protein L3 0.0406124 Not in scop E:7-17,18-28,98-115,158-178,179-186,192-201 423. 3d5b 50S ribosomal protein L3 0.0406075 Not in scop E:7-17,18-28,98-115,158-178,179-186,192-201 424. 2r6h NADH:ubiquinone oxidoreductase, Na translocat 0.0393608 Not in scop D:130-143,145-153,165-173,204-214,221-229,259-270 425. 2r6h NADH:ubiquinone oxidoreductase, Na translocat 0.0393066 Not in scop B:130-143,145-153,165-173,204-214,221-229,258-270 426. 1vf7 Multidrug resistance protein mexA 0.0384025 d1vf7e_ Multidrug resistance protein MexA domain HlyD-like secretion proteins HlyD-like secretion proteins E:23-36,171-180,202-211,219-224,234-244,251-266 427. 2vji TAILSPIKE PROTEIN 0.0378401 Not in scop A:633-643,642-650,658-664,675-681,683-692,696-708 428. 2vjj TAILSPIKE PROTEIN 0.0378215 Not in scop A:633-643,642-650,658-664,675-681,683-692,696-708