Citrus Sinensis ID: 000257

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620------1630------1640------1650------1660------1670------1680------1690------1700------1710------1720------1730------1740------1750------1760------1770----

MAAGGFVSRAFESMLKECSGKKFPDLQKAIQTYLDNAKEVKPPASSETSEATASAGDGSSIETEAGAAEKGTEAVQLPAEQTEHIGKTVGVSGSVATALANAGHTLEAADAELVLNPLRLAIETKNLKLLESALDCLHKLIAYDHLEGDPGLNGGKNAPLFTDILNMVCGCVDNSSSDSTILQVLKVLLTAVASAKFRVHGEPLLGVIRVCYNISLNSKSPINQATSKAMLTQMVSIVVRRMENDQVSTLPTSSGHTETSSADDASRMPEETTLGDKNKDGMTLGDALTQAKDTPIASVEELHNLAGGADIKGLEAVLDKAVHLEDGKKITRGIDLESMSIGQQDALLVFRTLCKMGMKEDSDEVTTKTRILSLELLQGLLEGVSHSFTKNFHFIDSIKAYLSYALLRASVSQSSVIFQYATGIFSVLLLRFRESLKGEIGVFFPLIVLRSLDGSDNNQKTSVLRMIDKVCKDPQMLVDVYVNYDCDLEAPNLFERMVTTLSKIAQGTQNTDPNSVMVSQTTTIKGSSLQCLVNVLKSLVEWERSRRETKKKNENSLSLAEEVNAKESVEIKSRDDVPDNFEKAKAHKSTMEAAISEFNRKPVKGVEYLISNKLVDNDPTSVAQFLRNAANLDKAMIGDYLGQHEEFPVAVMHAYVDSMKFSGMKFDTAIRELLKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVLAYSVILLNTDAHNPMVWPKMTKSDFVRMNAVNDAEECASTELLEEIYDSIVKEEIKMKDDVAKSSRQKQEGEERGGLVGILNLALPKQKSSTDTKSESEAIVKQTQAIFRNQGVKRGVFYTSNRIELVRPMVEAVGWPLLAAFSVTMEEGENKPRVALCMEGFKAGIHITQVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDTEPDSLQDTWNAVLECVSRLEFIMSTPAISATVMLGSNQISKDAVVQSLKELAGKPAEQVFVNSVKLPSDSIVEFFNALCGVSAEELRQTPARVFSLQKLVEISYYNMARIRMVWARIWSVLANHFISAGSHHDEKIAMYAIDSLRQLSMKYLERAELTNFTFQNDILKPFVVLIRNSRSETIRSLIVDCIVQMIKSKVGSIKSGWRSVFMIFTAAADDEVESIVESAFENVEQVILEHFDQVVGDCFMDCVNCLIRFANNKTSHRISLKAIALLRICEDRLAEGLIPGGDLKPIDVETDATFDVTEHFWFPMLAGLSDLTSDPRPEVRSCALEVLFDLLNERGSKFSASFWESIFHRVLFPIFDHVRHAGKESLISSEDEWFRETSIHSLQLLCNLFNTFYKEVCFMLPPLLSLLLDCAKKPDQSVVSISLGALVHLIEVGGHQFSESDWDTLLKSIRDASYTTQPLELLNENLKNVTVVIRDSEVGAGEADNNQFGVSDNGKVSTLSSPTIGADGTPRNLNTPFSLDHNQEAGLHLDGSEGVPSPSGRAQKTTEAFQRNQSIGQKIMGNMMDNRFLRSFTSKSKSQVPDASIPSSSPKLPDAVEPDAKDEEESPIWATIRGKCITQLLLLSAIDSIQRKYWGKLKAPQKIAIMDILLSLLEFSASYNSYSNLRMRMHHIPAERPPLNLLRQELAGTSIYLDILQKTTSRFNGNGEEIPKSNGSQGVDTTLDDNTSSCITHFDEKLVGIAEEKLVSFCEQVLREASDLQSSVGETTNMHIHRVLELRSPIIVKVLKGMCLMNNQIFRRHLRDFYPLLVRLICCDQMDIRGAVGDLFRMQLKALLP

cccccccHHHHHHHHHccccccccHHHHHHHHHHHcccccccccccccccHccccccccccccccHHHccccccccccHHHHHHccccccccHHHHHHHHHcccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccHHccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHccccccccHHHHHHHHHccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccccccccHHHHHHHcccccccccccHHHHHHHHHHHHHccccccccHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHcHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcHHHccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHcHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccc

***GGFVSRAFESMLK**********************************************************************KTVGVSGSVATALANAGHTLEAADAELVLNPLRLAIETKNLKLLESALDCLHKLIAYDHLEGDPGLNGGKNAPLFTDILNMVCGCVDNSSSDSTILQVLKVLLTAVASAKFRVHGEPLLGVIRVCYNISLNS***********MLTQMVSIVVRRM*********************************************************************************************LESMSIGQQDALLVFRTLCKMGM********TKTRILSLELLQGLLEGVSHSFTKNFHFIDSIKAYLSYALLRASVSQSSVIFQYATGIFSVLLLRFRESLKGEIGVFFPLIVLRSLDGSDNNQKTSVLRMIDKVCKDPQMLVDVYVNYDCDLEAPNLFERMVTTLSKIAQ**********MVSQTTTIKGSSLQCLVNVLKSLVEW**********************************************STMEAAISEFNRKPVKGVEYLISNKLVDNDPTSVAQFLRNAANLDKAMIGDYLGQHEEFPVAVMHAYVDSMKFSGMKFDTAIRELLKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVLAYSVILLNTDAHNPMVWPKMTKSDFVRMNAVNDAEECASTELLEEIYDSIVKEEIKMKDDV************RGGLVGILNLALPKQKSSTDTKSESEAIVKQTQAIFRNQGVKRGVFYTSNRIELVRPMVEAVGWPLLAAFSVTMEEGENKPRVALCMEGFKAGIHITQVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDTEPDSLQDTWNAVLECVSRLEFIMSTPAI*******************LKELAGKPAEQVFVNSVKLPSDSIVEFFNALCGVSAEELRQTPARVFSLQKLVEISYYNMARIRMVWARIWSVLANHFISAGSHHDEKIAMYAIDSLRQLSMKYLERAELTNFTFQNDILKPFVVLIRNSRSETIRSLIVDCIVQMIKSKVGSIKSGWRSVFMIFTAAADDEVESIVESAFENVEQVILEHFDQVVGDCFMDCVNCLIRFANNKTSHRISLKAIALLRICEDRLAEGL****************FDVTEHFWFPMLAGLSDLTSDPRPEVRSCALEVLFDLLNERGSKFSASFWESIFHRVLFPIFDHVRHAGKESLISSEDEWFRETSIHSLQLLCNLFNTFYKEVCFMLPPLLSLLLDCAKKPDQSVVSISLGALVHLIEVGGHQFSESDWDTLLKSIRDASYTTQPLELLNEN**********************************************************************************************************************************************IWATIRGKCITQLLLLSAIDSIQRKYWGKLKAPQKIAIMDILLSLLEFSASYNSYSNLRMRMHHIPAERPPLNLLRQELAGTSIYLDILQKTTSR*******************TLDDNTSSCITHFDEKLVGIAEEKLVSFCEQVLREASDLQSSVGETTNMHIHRVLELRSPIIVKVLKGMCLMNNQIFRRHLRDFYPLLVRLICCDQMDIRGAVGDLFRMQLKALLP

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Brefeldin A-inhibited guanine nucleotide-exchange protein 5	Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting. Acts as the major regulator of early endosomal vesicule trafficking but is also involved in the endocytosis process. Target of hopM1, a conserved Pseudomonas syringae virulence protein that directs the protein to its own proteasome-mediated degradation. Plays a broad role in PAMP-triggered immunity (PTI), effector-triggered immunity (ETI), and salicylic acid (SA)-regulated immunity.	confident	F4IXW2

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3LTL, chain A
Confidence level:very confident
Coverage over the Query: 584-772
View the alignment between query and template
View the model in PyMOL

Template: 1XSZ, chain A
Confidence level:very confident
Coverage over the Query: 579-777,801-921
View the alignment between query and template
View the model in PyMOL

Template: 2R09, chain A
Confidence level:very confident
Coverage over the Query: 582-805
View the alignment between query and template
View the model in PyMOL

Template: 1B3U, chain A
Confidence level:probable
Coverage over the Query: 883-1033,1046-1384
View the alignment between query and template
View the model in PyMOL

Template: 1U6G, chain C
Confidence level:probable
Coverage over the Query: 994-1208,1252-1313,1326-1394
View the alignment between query and template
View the model in PyMOL