Citrus Sinensis ID: 000257
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1774 | 2.2.26 [Sep-21-2011] | |||||||
| F4IXW2 | 1739 | Brefeldin A-inhibited gua | yes | no | 0.969 | 0.989 | 0.751 | 0.0 | |
| Q9LPC5 | 1750 | Brefeldin A-inhibited gua | no | no | 0.719 | 0.729 | 0.387 | 0.0 | |
| F4JSZ5 | 1687 | Brefeldin A-inhibited gua | no | no | 0.706 | 0.742 | 0.363 | 0.0 | |
| Q9LZX8 | 1793 | Brefeldin A-inhibited gua | no | no | 0.591 | 0.585 | 0.401 | 0.0 | |
| F4JN05 | 1706 | Brefeldin A-inhibited gua | no | no | 0.719 | 0.748 | 0.357 | 0.0 | |
| Q9Y6D5 | 1785 | Brefeldin A-inhibited gua | yes | no | 0.713 | 0.708 | 0.331 | 0.0 | |
| Q7TSU1 | 1791 | Brefeldin A-inhibited gua | yes | no | 0.711 | 0.705 | 0.324 | 0.0 | |
| Q9Y6D6 | 1849 | Brefeldin A-inhibited gua | no | no | 0.582 | 0.559 | 0.355 | 0.0 | |
| O46382 | 1849 | Brefeldin A-inhibited gua | no | no | 0.583 | 0.560 | 0.356 | 0.0 | |
| G3X9K3 | 1846 | Brefeldin A-inhibited gua | yes | no | 0.582 | 0.560 | 0.353 | 0.0 |
| >sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2 | Back alignment and function desciption |
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Score = 2704 bits (7008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1345/1790 (75%), Positives = 1497/1790 (83%), Gaps = 70/1790 (3%)
Query: 1 MAAGGFVSRAFESMLKECSGKKFPDLQKAIQTYLDNAKEVKPPASSETSEATASAGDGSS 60
MAAGGF++RAF++MLKE GKKFPDLQKAIQ Y D +K V A S E++ + G G
Sbjct: 1 MAAGGFLTRAFDTMLKESGGKKFPDLQKAIQAYQDGSKVVTQAAPSSIVESSQAEGGGEK 60
Query: 61 IETEAGAAEKGTEAVQLPAEQTEHIGKTVGVSGSVATALANAGHTLEAADAELVLNPLRL 120
EA +K T A ++ + ++ +T+ VS LANAGHTL A+ ELVL PLRL
Sbjct: 61 TGVEADEPQKVTSA-EVAQQASQSKSETINVS------LANAGHTLGGAEVELVLKPLRL 113
Query: 121 AIETKNLKLLESALDCLHKLIAYDHLEGDPGLNGGKNAPLFTDILNMVCGCVDNSSSDST 180
A ETKNLK+ ++ALDCLHKLIAYDHLEGDPGL+GGKN+ FTDILNMVC CVDNSS DST
Sbjct: 114 AFETKNLKIFDAALDCLHKLIAYDHLEGDPGLDGGKNSAPFTDILNMVCSCVDNSSPDST 173
Query: 181 ILQVLKVLLTAVASAKFRVHGEPLLGVIRVCYNISLNSKSPINQATSKAMLTQMVSIVVR 240
+LQVLKVLLTAVAS KF+VHGEPLLGVIRVCYNI+LNSKSPINQATSKAMLTQM+SIV R
Sbjct: 174 VLQVLKVLLTAVASGKFKVHGEPLLGVIRVCYNIALNSKSPINQATSKAMLTQMISIVFR 233
Query: 241 RMENDQVSTLPTSSGHTETSSADDASRMPEETTLGDKNKDGMTLGDALTQAKDTPIASVE 300
RME D VS T S E S D +S EE T D+N+ MTLGDALTQAKDT +ASVE
Sbjct: 234 RMETDIVSASSTVS-QEEHVSGDTSSPKNEEITAADENEKEMTLGDALTQAKDTTLASVE 292
Query: 301 ELHNLAGGADIKGLEAVLDKAVHLEDGKKITRGIDLESMSIGQQDALLVFRTLCKMGMKE 360
ELH L GGADIKGLEA LDKAVHLEDGKKI RGI+LESMSIGQ+DALLVFRTLCKMGMKE
Sbjct: 293 ELHTLVGGADIKGLEAALDKAVHLEDGKKIKRGIELESMSIGQRDALLVFRTLCKMGMKE 352
Query: 361 DSDEVTTKTRILSLELLQGLLEGVSHSFTKNFHFIDSIKAYLSYALLRASVSQSSVIFQY 420
DSDEVTTKTRILSLELLQG+LEGVSHSFTKNFHFIDS+KAYLSYALLRASVSQSSVIFQY
Sbjct: 353 DSDEVTTKTRILSLELLQGMLEGVSHSFTKNFHFIDSVKAYLSYALLRASVSQSSVIFQY 412
Query: 421 ATGIFSVLLLRFRESLKGEIGVFFPLIVLRSLDGSD--NNQKTSVLRMIDKVCKDPQMLV 478
A+GIFSVLLLRFR+SLKGEIG+FFP+IVLRSLD S+ N+QK VLRM++KVCKDPQMLV
Sbjct: 413 ASGIFSVLLLRFRDSLKGEIGIFFPIIVLRSLDNSECPNDQKMGVLRMLEKVCKDPQMLV 472
Query: 479 DVYVNYDCDLEAPNLFERMVTTLSKIAQGTQNTDPNSVMVSQTTTIKGSSLQCLVNVLKS 538
DVYVNYDCDLEAPNLFERMVTTLSKIAQG+Q+ DPN M SQT ++KGSSLQCLVNVLKS
Sbjct: 473 DVYVNYDCDLEAPNLFERMVTTLSKIAQGSQSADPNPAMASQTASVKGSSLQCLVNVLKS 532
Query: 539 LVEWERSRRE----TKKKNENSLSLAEEVNAKESVEIKSRDDVPDNFEKAKAHKSTMEAA 594
LV+WE+ RRE T+ NE+S S E +E KSR+DVP NFEKAKAHKSTMEAA
Sbjct: 533 LVDWEKIRREAENSTRNANEDSASTGE------PIETKSREDVPSNFEKAKAHKSTMEAA 586
Query: 595 ISEFNRKPVKGVEYLISNKLVDNDPTSVAQFLRNAANLDKAMIGDYLGQHEEFPVAVMHA 654
ISEFNR VKGVEYLI+NKLV+ +P SVAQFLR+ ++L K MIGDYLGQHEEFP+AVMHA
Sbjct: 587 ISEFNRNSVKGVEYLIANKLVERNPASVAQFLRSTSSLSKVMIGDYLGQHEEFPLAVMHA 646
Query: 655 YVDSMKFSGMKFDTAIRELLKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVL 714
YVDSMKFS MKF +AIRE LKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVL
Sbjct: 647 YVDSMKFSEMKFHSAIREFLKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVL 706
Query: 715 AYSVILLNTDAHNPMVWPKMTKSDFVRMNAVNDAEECASTELLEEIYDSIVKEEIKMKDD 774
AY+VI+LNTDAHNPMVWPKM+KSDF RMNA ND E+CA TELLEEIYDSIV+EEIK+KDD
Sbjct: 707 AYAVIMLNTDAHNPMVWPKMSKSDFTRMNATNDPEDCAPTELLEEIYDSIVQEEIKLKDD 766
Query: 775 --VAKSSRQKQEGEERGGLVGILNLALPKQKSSTDTKSESEAIVKQTQAIFRNQGVKRGV 832
+ K S Q+ GEERGGLV ILNL LPK+ S+ D KSE+E IV++TQ IFR GVKRGV
Sbjct: 767 DTMKKLSSQRPGGEERGGLVSILNLGLPKRISAADAKSETEDIVRKTQEIFRKHGVKRGV 826
Query: 833 FYTSNRIELVRPMVEAVGWPLLAAFSVTMEEGENKPRVALCMEGFKAGIHITQVLGMDTM 892
F+T +++++RPMVEAVGWPLLAAFSVTME G+NKPR+ LCMEGFKAGIHI VLGMDTM
Sbjct: 827 FHTVEQVDIIRPMVEAVGWPLLAAFSVTMEVGDNKPRILLCMEGFKAGIHIAYVLGMDTM 886
Query: 893 RYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDTEPDSLQDTWNAVLECVSRLEFIM 952
RYAFLTSLVRFTFLHAPKEMRSKNVEALR LL LCD+EPD+LQDTWNAVLECVSRLEFI+
Sbjct: 887 RYAFLTSLVRFTFLHAPKEMRSKNVEALRILLGLCDSEPDTLQDTWNAVLECVSRLEFII 946
Query: 953 STPAISATVMLGSNQISKDAVVQSLKELAGKPAEQVFVNSVKLPSDSIVEFFNALCGVSA 1012
STP I+ATVM GSNQIS+D VVQSLKELAG+PAEQVFVNSVKLPS+S+VEFF ALCGVSA
Sbjct: 947 STPGIAATVMHGSNQISRDGVVQSLKELAGRPAEQVFVNSVKLPSESVVEFFTALCGVSA 1006
Query: 1013 EELRQTPARVFSLQKLVEISYYNMARIRMVWARIWSVLANHFISAGSHHDEKIAMYAIDS 1072
EEL+Q+PARVFSLQKLVEISYYN+ARIRMVWARIWSVLA HF+SAGSHHDEKIAMYAIDS
Sbjct: 1007 EELKQSPARVFSLQKLVEISYYNIARIRMVWARIWSVLAEHFVSAGSHHDEKIAMYAIDS 1066
Query: 1073 LRQLSMKYLERAELTNFTFQNDILKPFVVLIRNSRSETIRSLIVDCIVQMIKSKVGSIKS 1132
LRQL MKYLERAELTNFTFQNDILKPFV+++RN++S+TIRSLIVDCIVQMIKSKVGSIKS
Sbjct: 1067 LRQLGMKYLERAELTNFTFQNDILKPFVIIMRNTQSQTIRSLIVDCIVQMIKSKVGSIKS 1126
Query: 1133 GWRSVFMIFTAAADDEVESIVESAFENVEQVILEHFDQVVGDCFMDCVNCLIRFANNKTS 1192
GWRSVFMIFTAAADDEVESIVE +FENVEQVILEHFDQV+GDCFMDCVNCLIRFANNK S
Sbjct: 1127 GWRSVFMIFTAAADDEVESIVEKSFENVEQVILEHFDQVIGDCFMDCVNCLIRFANNKAS 1186
Query: 1193 HRISLKAIALLRICEDRLAEGLIPGGDLKPIDVETDATFDVTEHFWFPMLAGLSDLTSDP 1252
RISLKAIALLRICEDRLAEGLIPGG LKP+D D TFDVTEH+WFPMLAGLSDLTSD
Sbjct: 1187 DRISLKAIALLRICEDRLAEGLIPGGVLKPVDGNEDETFDVTEHYWFPMLAGLSDLTSDY 1246
Query: 1253 RPEVRSCALEVLFDLLNERGSKFSASFWESIFHRVLFPIFDHVRHAGKESLISSEDEWFR 1312
RPEVR+CALEVLFDLLNERG+KFS FWESIFHR+LFPIFDHV HAGKESLISS D FR
Sbjct: 1247 RPEVRNCALEVLFDLLNERGNKFSTPFWESIFHRILFPIFDHVSHAGKESLISSGDVKFR 1306
Query: 1313 ETSIHSLQLLCNLFNTFYKEVCFMLPPLLSLLLDCAKKPDQSVVSISLGALVHLIEVGGH 1372
ETSIHSLQLLCNLFNTFYKEVCFMLPPLLSLLLDCAKK DQ+VVSISLGALVHLIEVGGH
Sbjct: 1307 ETSIHSLQLLCNLFNTFYKEVCFMLPPLLSLLLDCAKKSDQTVVSISLGALVHLIEVGGH 1366
Query: 1373 QFSESDWDTLLKSIRDASYTTQPLELLN----ENLKNVTVVIRDSEVGAGEA---DNNQF 1425
QFSE DWD LLKSIRDASYTTQPLELLN +N K V+ D E A ++ D N
Sbjct: 1367 QFSEGDWDMLLKSIRDASYTTQPLELLNALSFDNPKKNLVLAGDIEADASDSPRVDRNPD 1426
Query: 1426 GVSDNGKVSTLSSPTIGADGTPRNLNTPFSLDHNQEAGLHLDGSEGVPSPSGRAQKTTE- 1484
+ DNGKVS +SP IG GT P DGSEG PS SGRAQK +
Sbjct: 1427 DIKDNGKVSAQASPRIGTHGTSLESGIP----------PKADGSEGRPSSSGRAQKDVDD 1476
Query: 1485 -AFQRNQSIGQKIMGNMMDNRFLRSFTSKSKSQVPDASIPSSSPKLPDAVEPDAKDEEES 1543
QR+Q+ GQ+ MDN FLR+ TS+ KS V + ++PSS K D EPD++ EEES
Sbjct: 1477 VNLQRSQTFGQR----FMDNLFLRNLTSQPKSSVAEVTVPSSPYKHEDPTEPDSR-EEES 1531
Query: 1544 PIWATIRGKCITQLLLLSAIDSIQRKYWGKLKAPQKIAIMDILLSLLEFSASYNSYSNLR 1603
P IRGKCITQLLLL AI+SIQ+KYW LK PQKIAIMDIL S +EF++SYNSYSNLR
Sbjct: 1532 PALGAIRGKCITQLLLLGAINSIQQKYWSNLKTPQKIAIMDILFSFIEFASSYNSYSNLR 1591
Query: 1604 MRMHHIPAERPPLNLLRQELAGTSIYLDILQKTTSRFNGNGEEIPKSNGSQGVDTTLDDN 1663
RM+HIP ERPPLNLLRQEL GT+IYLD+LQKTTS DD
Sbjct: 1592 TRMNHIPTERPPLNLLRQELEGTTIYLDVLQKTTSGL-------------------ADDA 1632
Query: 1664 TSSCITHFDEKLVGIAEEKLVSFCEQVLREASDLQSSVGETTNMHIHRVLELRSPIIVKV 1723
++S +++L G AEEKLVSFCEQVL+E SDLQS++GETTNM +HRVLELRSP+IVKV
Sbjct: 1633 SNS-----EDRLEGAAEEKLVSFCEQVLKETSDLQSTLGETTNMDVHRVLELRSPVIVKV 1687
Query: 1724 LKGMCLMNNQIFRRHLRDFYPLLVRLICCDQMDIRGAVGDLFRMQLKALL 1773
L+GMC MNN IFR+H+R+FYPLL RL+CC+QM+IRGA+ +LF+ QLK LL
Sbjct: 1688 LEGMCFMNNTIFRKHMREFYPLLTRLVCCEQMEIRGALANLFKAQLKPLL 1737
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Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting. Acts as the major regulator of early endosomal vesicule trafficking but is also involved in the endocytosis process. Target of hopM1, a conserved Pseudomonas syringae virulence protein that directs the protein to its own proteasome-mediated degradation. Plays a broad role in PAMP-triggered immunity (PTI), effector-triggered immunity (ETI), and salicylic acid (SA)-regulated immunity. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LPC5|BIG3_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Arabidopsis thaliana GN=BIG3 PE=1 SV=1 | Back alignment and function description |
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| >sp|F4JSZ5|BIG1_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Arabidopsis thaliana GN=BIG1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Arabidopsis thaliana GN=BIG2 PE=2 SV=1 | Back alignment and function description |
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| >sp|F4JN05|BIG4_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 4 OS=Arabidopsis thaliana GN=BIG4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9Y6D5|BIG2_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo sapiens GN=ARFGEF2 PE=1 SV=3 | Back alignment and function description |
|---|
| >sp|Q7TSU1|BIG2_RAT Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Rattus norvegicus GN=Arfgef2 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q9Y6D6|BIG1_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Homo sapiens GN=ARFGEF1 PE=1 SV=2 | Back alignment and function description |
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| >sp|O46382|BIG1_BOVIN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Bos taurus GN=ARFGEF1 PE=1 SV=1 | Back alignment and function description |
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| >sp|G3X9K3|BIG1_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Mus musculus GN=Arfgef1 PE=2 SV=1 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1774 | ||||||
| 297738490 | 1778 | unnamed protein product [Vitis vinifera] | 0.983 | 0.981 | 0.803 | 0.0 | |
| 359484237 | 1730 | PREDICTED: brefeldin A-inhibited guanine | 0.959 | 0.983 | 0.810 | 0.0 | |
| 255550257 | 1714 | guanine nucleotide-exchange, putative [R | 0.956 | 0.989 | 0.800 | 0.0 | |
| 356545802 | 1757 | PREDICTED: brefeldin A-inhibited guanine | 0.979 | 0.988 | 0.781 | 0.0 | |
| 449433135 | 1783 | PREDICTED: brefeldin A-inhibited guanine | 0.988 | 0.983 | 0.771 | 0.0 | |
| 449061867 | 1739 | RecName: Full=Brefeldin A-inhibited guan | 0.969 | 0.989 | 0.751 | 0.0 | |
| 186510627 | 1758 | guanine nucleotide-exchange factor [Arab | 0.969 | 0.978 | 0.743 | 0.0 | |
| 297818780 | 1758 | predicted protein [Arabidopsis lyrata su | 0.965 | 0.974 | 0.738 | 0.0 | |
| 356564698 | 1759 | PREDICTED: brefeldin A-inhibited guanine | 0.975 | 0.983 | 0.758 | 0.0 | |
| 334185713 | 1727 | guanine nucleotide-exchange factor [Arab | 0.962 | 0.988 | 0.740 | 0.0 |
| >gi|297738490|emb|CBI27735.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2908 bits (7538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1448/1802 (80%), Positives = 1578/1802 (87%), Gaps = 57/1802 (3%)
Query: 2 AAGGFVSRAFESMLKECSGKKFPDLQKAIQTYLDNAKEV-KPPASSETSEATASAGDGSS 60
AAGGF+SRAFESMLKECSGKK+P L K+IQTYLD+ KEV + A SET++A + GSS
Sbjct: 5 AAGGFISRAFESMLKECSGKKYPALHKSIQTYLDSTKEVDQHSAFSETNQAASLTAYGSS 64
Query: 61 IETEAGAAEKGTEAVQLPA---EQTEHIGKTVGVSGSVATALANAGHTLEAADAELVLNP 117
ET+AG A+ EA A E E +G+ VG SG++ ALA+AGHTLE A+ ELVLNP
Sbjct: 65 SETDAGIAKNEIEANHSRAHTGEGVERVGRPVGTSGTITAALAHAGHTLEGAEVELVLNP 124
Query: 118 LRLAIETKNLKLLESALDCLHKLIAYDHLEGDPGLNGGKNAPLFTDILNMVCGCVDNSSS 177
LRLAIETKNLK+LE ALDCLHKLIAY+HLEGDPGL+GG NAPLFTDILNMVC CVDNSSS
Sbjct: 125 LRLAIETKNLKVLEPALDCLHKLIAYEHLEGDPGLDGGTNAPLFTDILNMVCSCVDNSSS 184
Query: 178 DSTILQVLKVLLTAVASAKFRVHGEPLLGVIRVCYNISLNSKSPINQATSKAMLTQMVSI 237
DSTILQVL+VLLTAVAS KFRVHGEPLLGVIR+CYNI+LNSKSPINQATSKAMLTQM+SI
Sbjct: 185 DSTILQVLQVLLTAVASTKFRVHGEPLLGVIRICYNIALNSKSPINQATSKAMLTQMISI 244
Query: 238 VVRRMENDQVSTLPTSSGHTETSSADDASRMPEETTLGDKNKDGMTLGDALT--QAKDTP 295
+ RRME D V T S+ + E + AD+ + ET+ GD+ + MTLGDAL+ Q KDT
Sbjct: 245 IFRRMETDPVCTTSGSAANKEATLADNLNS-EVETSSGDQTEKEMTLGDALSMNQVKDTA 303
Query: 296 IASVEELHNLAGGADIKGLEAVLDKAVHLEDGKKITRGIDLESMSIGQQDALLVFRTLCK 355
+ASVEEL NLAGGADIKGLEAVLDKAVHLEDGKK+TRGIDLESMSI Q+DALL+FRTLCK
Sbjct: 304 LASVEELQNLAGGADIKGLEAVLDKAVHLEDGKKMTRGIDLESMSIRQRDALLLFRTLCK 363
Query: 356 MGMKEDSDEVTTKTRILSLELLQGLLEGVSHSFTKNFHFIDSIKAYLSYALLRASVSQSS 415
MGMKED+DEVTTKTRILSLELLQGLLEGVSHSFT NFHFIDS+KAYLSYALLRASVSQS
Sbjct: 364 MGMKEDNDEVTTKTRILSLELLQGLLEGVSHSFTTNFHFIDSVKAYLSYALLRASVSQSP 423
Query: 416 VIFQYATGIFSVLLLRFRESLKGEIGVFFPLIVLRSLDGSDN--NQKTSVLRMIDKVCKD 473
VIFQYATGIFSVLLLRFRESLKGEIGVFFPLIVLRSLDGSD NQ+ SVLRM++KVCKD
Sbjct: 424 VIFQYATGIFSVLLLRFRESLKGEIGVFFPLIVLRSLDGSDFPVNQRISVLRMLEKVCKD 483
Query: 474 PQMLVDVYVNYDCDLEAPNLFERMVTTLSKIAQGTQNTDPNSVMVSQTTTIKGSSLQCLV 533
PQMLVD+YVNYDCDLEAPNLFERMVTTLSKIAQGTQN DPNSV VSQTTTIKGSSLQCLV
Sbjct: 484 PQMLVDIYVNYDCDLEAPNLFERMVTTLSKIAQGTQNADPNSVAVSQTTTIKGSSLQCLV 543
Query: 534 NVLKSLVEWERSRRETKKKNENSLSLAEEVNAKESVEIKSRDDVPDNFEKAKAHKSTMEA 593
NVLKSLV+WERS R+ +K+ S EE++A+ESVEIKSR+D+P+NFE+AKAHKSTMEA
Sbjct: 544 NVLKSLVDWERSHRDKHRKSTQSPE--EELSARESVEIKSREDMPNNFERAKAHKSTMEA 601
Query: 594 AISEFNRKPVKGVEYLISNKLVDNDPTSVAQFLRNAANLDKAMIGDYLGQHEEFPVAVMH 653
AISEFNR+P KG+EYLISN+LV+N P SVAQFLRN +LDKAMIGDYLGQHEEFP+AVMH
Sbjct: 602 AISEFNRQPGKGIEYLISNRLVENTPASVAQFLRNTPSLDKAMIGDYLGQHEEFPLAVMH 661
Query: 654 AYVDSMKFSGMKFDTAIRELLKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYV 713
AYVDSMKFSGMKFDTAIRE L+GFRLPGEAQKIDRIMEKFAERYCADNP LFKNADTAYV
Sbjct: 662 AYVDSMKFSGMKFDTAIREFLRGFRLPGEAQKIDRIMEKFAERYCADNPDLFKNADTAYV 721
Query: 714 LAYSVILLNTDAHNPMVWPKMTKSDFVRMNAVNDAEECASTELLEEIYDSIVKEEIKMKD 773
LAY+VI+LNTDAHNPMVWPKM+KSDF+R+NA+NDAEECA ELLEEIYDSIVKEEIKMKD
Sbjct: 722 LAYAVIMLNTDAHNPMVWPKMSKSDFIRVNAMNDAEECAPKELLEEIYDSIVKEEIKMKD 781
Query: 774 DVA---KSSRQKQEGEERGGLVGILNLALPKQKSSTDTKSESEAIVKQTQAIFRNQGVKR 830
D A K +QK EGEERG LV ILNLALPK+KSS DTKSESEAI+KQTQAIFRNQG KR
Sbjct: 782 DAAGIGKGIKQKPEGEERGRLVSILNLALPKRKSSVDTKSESEAIIKQTQAIFRNQGAKR 841
Query: 831 GVFYTSNRIELVRPMVEAVGWPLLAAFSVTMEEGENKPRVALCMEGFKAGIHITQVLGMD 890
GVFYTS +IELVRPMVEAVGWPLLA FSVTMEEG+NKPRV LCMEGF+AGIHIT V+GMD
Sbjct: 842 GVFYTSQQIELVRPMVEAVGWPLLATFSVTMEEGDNKPRVLLCMEGFRAGIHITHVIGMD 901
Query: 891 TMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDTEPDSLQDTWNAVLECVSRLEF 950
TMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCD+E +SLQDTWNAVLECVSRLEF
Sbjct: 902 TMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDSETNSLQDTWNAVLECVSRLEF 961
Query: 951 IMSTPAISATVMLGSNQISKDAVVQSLKELAGKPAEQVFVNSVKLPSDSIVEFFNALCGV 1010
I STPAI+ATVM SNQIS+DA++QSL+ELAGKPAEQVFVNSVKLPSDS+VEFF ALCGV
Sbjct: 962 ITSTPAIAATVMQASNQISRDAILQSLRELAGKPAEQVFVNSVKLPSDSVVEFFTALCGV 1021
Query: 1011 SAEELRQTPARVFSLQKLVEISYYNMARIRMVWARIWSVLANHFISAGSHHDEKIAMYAI 1070
SAEEL+QTPARVFSLQKLVEISYYNMARIR+VWARIWSVLANHFISAGSHHDEKIAMYAI
Sbjct: 1022 SAEELKQTPARVFSLQKLVEISYYNMARIRLVWARIWSVLANHFISAGSHHDEKIAMYAI 1081
Query: 1071 DSLRQLSMKYLERAELTNFTFQNDILKPFVVLIRNSRSETIRSLIVDCIVQMIKSKVGSI 1130
DSLRQL MKYLERAEL NFTFQNDILKPFV+L+RNS+SETIRSLIVDCIVQMIKSKVGSI
Sbjct: 1082 DSLRQLGMKYLERAELANFTFQNDILKPFVILMRNSQSETIRSLIVDCIVQMIKSKVGSI 1141
Query: 1131 KSGWRSVFMIFTAAADDEVESIVESAFENVEQVILEHFDQVVGDCFMDCVNCLIRFANNK 1190
KSGWRSVFMIFTAAADDE+ESIVESAFENVEQVILEHFDQVVGDCFMDCVNCLI F+NNK
Sbjct: 1142 KSGWRSVFMIFTAAADDELESIVESAFENVEQVILEHFDQVVGDCFMDCVNCLIGFSNNK 1201
Query: 1191 TSHRISLKAIALLRICEDRLAEGLIPGGDLKPIDVETDATFDVTEHFWFPMLAGLSDLTS 1250
+SHRISLKAIALLRICEDRLAEGLIPGG LKPID+ D TFDVTEH+WFPMLAGLSDLTS
Sbjct: 1202 SSHRISLKAIALLRICEDRLAEGLIPGGALKPIDINMDTTFDVTEHYWFPMLAGLSDLTS 1261
Query: 1251 DPRPEVRSCALEVLFDLLNERGSKFSASFWESIFHRVLFPIFDHVRHAGKESLISSEDEW 1310
DPRPEVRSCALEVLFDLLNERG KFS+SFWESIFHRVLFPIFDHVR A KESL+SS DEW
Sbjct: 1262 DPRPEVRSCALEVLFDLLNERGHKFSSSFWESIFHRVLFPIFDHVRDASKESLVSSGDEW 1321
Query: 1311 FRETSIHSLQLLCNLFNTFYKEVCFMLPPLLSLLLDCAKKPDQSVVSISLGALVHLIEVG 1370
RETSIHSLQLLCNLFNTFYKEVCFMLPPLLSLLLDCAKK DQSVVSISLGALVHLIEVG
Sbjct: 1322 LRETSIHSLQLLCNLFNTFYKEVCFMLPPLLSLLLDCAKKTDQSVVSISLGALVHLIEVG 1381
Query: 1371 GHQFSESDWDTLLKSIRDASYTTQPLELLN----ENLKNVTVVIRDSEVGAG-------- 1418
GHQFSESDWDTLLKSIRDASYTTQPLELLN EN KN V+ RDSE+ G
Sbjct: 1382 GHQFSESDWDTLLKSIRDASYTTQPLELLNALGFENPKNHAVLARDSEITKGVSPSPKSV 1441
Query: 1419 ---EADNNQFGVSDNGKVSTLSSPTIGADGTPRNLNTPFSLDHNQEAGL--HLDGSEGVP 1473
+ D++QF V DNGK S L+SP+I +DGT +NLN DHNQE G +LDGSEG+P
Sbjct: 1442 DNIQVDDHQFDVRDNGKTSPLASPSIVSDGTIKNLNASVVEDHNQEMGFQTNLDGSEGLP 1501
Query: 1474 SPSGRAQKTTE-AFQRNQSIGQKIMGNMMDNRFLRSFTSKSKSQVPDASIPSSSPKLPDA 1532
SPSGRAQK E R+Q+IGQ+IMGNMMDN FLRS TSKSKS+V DAS P S PK PDA
Sbjct: 1502 SPSGRAQKAAEVGLHRSQTIGQRIMGNMMDNLFLRSLTSKSKSRVSDASAPPSPPKFPDA 1561
Query: 1533 VEPDAKDEEESPIWATIRGKCITQLLLLSAIDSIQRKYWGKLKAPQKIAIMDILLSLLEF 1592
VEPD KD+EE+ + TIRGKC+TQLLLL AIDSIQ+KYW KL QK+ +M+ILL++LEF
Sbjct: 1562 VEPDTKDKEENLLLGTIRGKCVTQLLLLGAIDSIQKKYWSKLNRSQKVTMMEILLAVLEF 1621
Query: 1593 SASYNSYSNLRMRMHHIPAERPPLNLLRQELAGTSIYLDILQKTTSRFNGNGEEIPKSNG 1652
+ASYNSY+NLRMRMHHIPAERPPLNLLRQELAGT IYLDILQKTTS N EE +SN
Sbjct: 1622 AASYNSYTNLRMRMHHIPAERPPLNLLRQELAGTCIYLDILQKTTSGLNNKKEEHLESN- 1680
Query: 1653 SQGVDTTLDDNTSSCITHFDEKLVGIAEEKLVSFCEQVLREASDLQSSVGETTNMHIHRV 1712
GIAEEKLVSFC Q+LREASDLQS+VGETTNM IHRV
Sbjct: 1681 ------------------------GIAEEKLVSFCGQILREASDLQSTVGETTNMDIHRV 1716
Query: 1713 LELRSPIIVKVLKGMCLMNNQIFRRHLRDFYPLLVRLICCDQMDIRGAVGDLFRMQLKAL 1772
LELRSPIIVKVLK M MNNQIFRRHLR+FYPL+ +L+CCDQMD+RGA+GDLF QL AL
Sbjct: 1717 LELRSPIIVKVLKSMSFMNNQIFRRHLREFYPLITKLVCCDQMDVRGALGDLFSTQLNAL 1776
Query: 1773 LP 1774
LP
Sbjct: 1777 LP 1778
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359484237|ref|XP_003633087.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255550257|ref|XP_002516179.1| guanine nucleotide-exchange, putative [Ricinus communis] gi|223544665|gb|EEF46181.1| guanine nucleotide-exchange, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356545802|ref|XP_003541323.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449433135|ref|XP_004134353.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Cucumis sativus] gi|449480318|ref|XP_004155860.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449061867|sp|F4IXW2.2|BIG5_ARATH RecName: Full=Brefeldin A-inhibited guanine nucleotide-exchange protein 5; Short=BIG5; AltName: Full=ARF guanine-nucleotide exchange factor BIG5; AltName: Full=Protein BFA-VISUALIZED ENDOCYTIC TRAFFICKING DEFECTIVE 1; Short=Protein BEN1; AltName: Full=Protein HOPM INTERACTOR 7 | Back alignment and taxonomy information |
|---|
| >gi|186510627|ref|NP_189916.4| guanine nucleotide-exchange factor [Arabidopsis thaliana] gi|332644264|gb|AEE77785.1| guanine nucleotide-exchange factor [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297818780|ref|XP_002877273.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297323111|gb|EFH53532.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|356564698|ref|XP_003550586.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|334185713|ref|NP_001190006.1| guanine nucleotide-exchange factor [Arabidopsis thaliana] gi|332644265|gb|AEE77786.1| guanine nucleotide-exchange factor [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1774 | ||||||
| TAIR|locus:2084706 | 1739 | ATMIN7 "AT3G43300" [Arabidopsi | 0.909 | 0.927 | 0.749 | 0.0 | |
| UNIPROTKB|Q10P53 | 1789 | Os03g0246800 "Sec7 domain cont | 0.206 | 0.204 | 0.458 | 1.1e-228 | |
| TAIR|locus:2025502 | 1750 | EDA10 "AT1G01960" [Arabidopsis | 0.207 | 0.210 | 0.463 | 3e-225 | |
| TAIR|locus:2101906 | 1793 | AT3G60860 "AT3G60860" [Arabido | 0.206 | 0.204 | 0.469 | 1.9e-215 | |
| FB|FBgn0028538 | 1653 | Sec71 "Sec71 ortholog (S. cere | 0.454 | 0.488 | 0.358 | 6.9e-208 | |
| UNIPROTKB|A8J189 | 2150 | CHLREDRAFT_148829 "SEC7/BIG-li | 0.209 | 0.172 | 0.407 | 3e-195 | |
| ZFIN|ZDB-GENE-030131-108 | 1849 | arfgef1 "ADP-ribosylation fact | 0.250 | 0.240 | 0.344 | 6.1e-192 | |
| RGD|1560793 | 1846 | Arfgef1 "ADP-ribosylation fact | 0.229 | 0.221 | 0.361 | 4.2e-189 | |
| MGI|MGI:2442988 | 1846 | Arfgef1 "ADP-ribosylation fact | 0.229 | 0.221 | 0.356 | 8.3e-189 | |
| UNIPROTKB|E1BP90 | 1849 | ARFGEF1 "Brefeldin A-inhibited | 0.229 | 0.220 | 0.356 | 8.7e-189 |
| TAIR|locus:2084706 ATMIN7 "AT3G43300" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 6172 (2177.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 1237/1651 (74%), Positives = 1367/1651 (82%)
Query: 1 MAAGGFVSRAFESMLKECSGKKFPDLQKAIQTYLDNAKEVKPPXXXXXXXXXXXXGDGSS 60
MAAGGF++RAF++MLKE GKKFPDLQKAIQ Y D +K V G G
Sbjct: 1 MAAGGFLTRAFDTMLKESGGKKFPDLQKAIQAYQDGSKVVTQAAPSSIVESSQAEGGGEK 60
Query: 61 IXXXXXXXXXXXXXVQLPAEQTEHIGKTVGVSGSVATALANAGHTLEAADAELVLNPLRL 120
++ + ++ +T+ VS LANAGHTL A+ ELVL PLRL
Sbjct: 61 -TGVEADEPQKVTSAEVAQQASQSKSETINVS------LANAGHTLGGAEVELVLKPLRL 113
Query: 121 AIETKNLKLLESALDCLHKLIAYDHLEGDPGLNGGKNAPLFTDILNMVCGCVDNSSSDST 180
A ETKNLK+ ++ALDCLHKLIAYDHLEGDPGL+GGKN+ FTDILNMVC CVDNSS DST
Sbjct: 114 AFETKNLKIFDAALDCLHKLIAYDHLEGDPGLDGGKNSAPFTDILNMVCSCVDNSSPDST 173
Query: 181 ILQVLKVLLTAVASAKFRVHGEPLLGVIRVCYNISLNSKSPINQATSKAMLTQMVSIVVR 240
+LQVLKVLLTAVAS KF+VHGEPLLGVIRVCYNI+LNSKSPINQATSKAMLTQM+SIV R
Sbjct: 174 VLQVLKVLLTAVASGKFKVHGEPLLGVIRVCYNIALNSKSPINQATSKAMLTQMISIVFR 233
Query: 241 RMENDQVSTLPTSSGHTETSSADDASRMPEETTLGDKNKDGMTLGDALTQAKDTPIASVE 300
RME D VS T S E S D +S EE T D+N+ MTLGDALTQAKDT +ASVE
Sbjct: 234 RMETDIVSASSTVS-QEEHVSGDTSSPKNEEITAADENEKEMTLGDALTQAKDTTLASVE 292
Query: 301 ELHNLAGGADIKGLEAVLDKAVHLEDGKKITRGIDLESMSIGQQDALLVFRTLCKMGMKE 360
ELH L GGADIKGLEA LDKAVHLEDGKKI RGI+LESMSIGQ+DALLVFRTLCKMGMKE
Sbjct: 293 ELHTLVGGADIKGLEAALDKAVHLEDGKKIKRGIELESMSIGQRDALLVFRTLCKMGMKE 352
Query: 361 DSDEVTTKTRIXXXXXXXXXXXXVSHSFTKNFHFIDSIKAYLSYALLRASVSQSSVIFQY 420
DSDEVTTKTRI VSHSFTKNFHFIDS+KAYLSYALLRASVSQSSVIFQY
Sbjct: 353 DSDEVTTKTRILSLELLQGMLEGVSHSFTKNFHFIDSVKAYLSYALLRASVSQSSVIFQY 412
Query: 421 ATGIFSVLLLRFRESLKGEIGVFFPLIVLRSLDGSD--NNQKTSVLRMIDKVCKDPQMLV 478
A+GIFSVLLLRFR+SLKGEIG+FFP+IVLRSLD S+ N+QK VLRM++KVCKDPQMLV
Sbjct: 413 ASGIFSVLLLRFRDSLKGEIGIFFPIIVLRSLDNSECPNDQKMGVLRMLEKVCKDPQMLV 472
Query: 479 DVYVNYDCDLEAPNLFERMVTTLSKIAQGTQNTDPNSVMVSQTTTIKGSSLQCLVNVLKS 538
DVYVNYDCDLEAPNLFERMVTTLSKIAQG+Q+ DPN M SQT ++KGSSLQCLVNVLKS
Sbjct: 473 DVYVNYDCDLEAPNLFERMVTTLSKIAQGSQSADPNPAMASQTASVKGSSLQCLVNVLKS 532
Query: 539 LVEWERSRRETKKKNENSLSLAEEVNAKESVEIKSRDDVPDNFEKAKAHKSTMEAAISEF 598
LV+WE+ RRE + N+ + + E +E KSR+DVP NFEKAKAHKSTMEAAISEF
Sbjct: 533 LVDWEKIRREAENSTRNANE--DSASTGEPIETKSREDVPSNFEKAKAHKSTMEAAISEF 590
Query: 599 NRKPVKGVEYLISNKLVDNDPTSVAQFLRNAANLDKAMIGDYLGQHEEFPVAVMHAYVDS 658
NR VKGVEYLI+NKLV+ +P SVAQFLR+ ++L K MIGDYLGQHEEFP+AVMHAYVDS
Sbjct: 591 NRNSVKGVEYLIANKLVERNPASVAQFLRSTSSLSKVMIGDYLGQHEEFPLAVMHAYVDS 650
Query: 659 MKFSGMKFDTAIRELLKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVLAYSV 718
MKFS MKF +AIRE LKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVLAY+V
Sbjct: 651 MKFSEMKFHSAIREFLKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVLAYAV 710
Query: 719 ILLNTDAHNPMVWPKMTKSDFVRMNAVNDAEECASTELLEEIYDSIVKEEIKMKDD--VA 776
I+LNTDAHNPMVWPKM+KSDF RMNA ND E+CA TELLEEIYDSIV+EEIK+KDD +
Sbjct: 711 IMLNTDAHNPMVWPKMSKSDFTRMNATNDPEDCAPTELLEEIYDSIVQEEIKLKDDDTMK 770
Query: 777 KSSRQKQEGEERGGLVGILNLALPKQKSSTDTKSESEAIVKQTQAIFRNQGVKRGVFYTS 836
K S Q+ GEERGGLV ILNL LPK+ S+ D KSE+E IV++TQ IFR GVKRGVF+T
Sbjct: 771 KLSSQRPGGEERGGLVSILNLGLPKRISAADAKSETEDIVRKTQEIFRKHGVKRGVFHTV 830
Query: 837 NRIELVRPMVEAVGWPLLAAFSVTMEEGENKPRVALCMEGFKAGIHITQVLGMDTMRYAF 896
+++++RPMVEAVGWPLLAAFSVTME G+NKPR+ LCMEGFKAGIHI VLGMDTMRYAF
Sbjct: 831 EQVDIIRPMVEAVGWPLLAAFSVTMEVGDNKPRILLCMEGFKAGIHIAYVLGMDTMRYAF 890
Query: 897 LTSLVRFTFLHAPKEMRSKNVEALRTLLALCDTEPDSLQDTWNAVLECVSRLEFIMSTPA 956
LTSLVRFTFLHAPKEMRSKNVEALR LL LCD+EPD+LQDTWNAVLECVSRLEFI+STP
Sbjct: 891 LTSLVRFTFLHAPKEMRSKNVEALRILLGLCDSEPDTLQDTWNAVLECVSRLEFIISTPG 950
Query: 957 ISATVMLGSNQISKDAVVQSLKELAGKPAEQVFVNSVKLPSDSIVEFFNALCGVSAEELR 1016
I+ATVM GSNQIS+D VVQSLKELAG+PAEQVFVNSVKLPS+S+VEFF ALCGVSAEEL+
Sbjct: 951 IAATVMHGSNQISRDGVVQSLKELAGRPAEQVFVNSVKLPSESVVEFFTALCGVSAEELK 1010
Query: 1017 QTPARVFSLQKLVEISYYNMARIRMVWARIWSVLANHFISAGSHHDEKIAMYAIDSLRQL 1076
Q+PARVFSLQKLVEISYYN+ARIRMVWARIWSVLA HF+SAGSHHDEKIAMYAIDSLRQL
Sbjct: 1011 QSPARVFSLQKLVEISYYNIARIRMVWARIWSVLAEHFVSAGSHHDEKIAMYAIDSLRQL 1070
Query: 1077 SMKYLERAELTNFTFQNDILKPFVVLIRNSRSETIRSLIVDCIVQMIKSKVGSIKSGWRS 1136
MKYLERAELTNFTFQNDILKPFV+++RN++S+TIRSLIVDCIVQMIKSKVGSIKSGWRS
Sbjct: 1071 GMKYLERAELTNFTFQNDILKPFVIIMRNTQSQTIRSLIVDCIVQMIKSKVGSIKSGWRS 1130
Query: 1137 VFMIFTAAADDEVESIVESAFENVEQVILEHFDQVVGDCFMDCVNCLIRFANNKTSHRIS 1196
VFMIFTAAADDEVESIVE +FENVEQVILEHFDQV+GDCFMDCVNCLIRFANNK S RIS
Sbjct: 1131 VFMIFTAAADDEVESIVEKSFENVEQVILEHFDQVIGDCFMDCVNCLIRFANNKASDRIS 1190
Query: 1197 LKAIALLRICEDRLAEGLIPGGDLKPIDVETDATFDVTEHFWFPMLAGLSDLTSDPRPEV 1256
LKAIALLRICEDRLAEGLIPGG LKP+D D TFDVTEH+WFPMLAGLSDLTSD RPEV
Sbjct: 1191 LKAIALLRICEDRLAEGLIPGGVLKPVDGNEDETFDVTEHYWFPMLAGLSDLTSDYRPEV 1250
Query: 1257 RSCALEVLFDLLNERGSKFSASFWESIFHRVLFPIFDHVRHAGKESLISSEDEWFRETSI 1316
R+CALEVLFDLLNERG+KFS FWESIFHR+LFPIFDHV HAGKESLISS D FRETSI
Sbjct: 1251 RNCALEVLFDLLNERGNKFSTPFWESIFHRILFPIFDHVSHAGKESLISSGDVKFRETSI 1310
Query: 1317 HSLQLLCNLFNTFYKEVCFMXXXXXXXXXDCAKKPDQSVVSISLGALVHLIEVGGHQFSE 1376
HSLQLLCNLFNTFYKEVCFM DCAKK DQ+VVSISLGALVHLIEVGGHQFSE
Sbjct: 1311 HSLQLLCNLFNTFYKEVCFMLPPLLSLLLDCAKKSDQTVVSISLGALVHLIEVGGHQFSE 1370
Query: 1377 SDWDTLLKSIRDASYTTQPLELLN----ENLKNVTVVIRDSEVGAGEA---DNNQFGVSD 1429
DWD LLKSIRDASYTTQPLELLN +N K V+ D E A ++ D N + D
Sbjct: 1371 GDWDMLLKSIRDASYTTQPLELLNALSFDNPKKNLVLAGDIEADASDSPRVDRNPDDIKD 1430
Query: 1430 NGKVSTLSSPTIGADGTPRNLNTPFSLDHNQEAGLHLDGSEGVPSPSGRAQKTTEA--FQ 1487
NGKVS +SP IG GT P +A DGSEG PS SGRAQK + Q
Sbjct: 1431 NGKVSAQASPRIGTHGTSLESGIP------PKA----DGSEGRPSSSGRAQKDVDDVNLQ 1480
Query: 1488 RNQSIGQKIMGNMMDNRFLRSFTSKSKSQVPDASIPSSSPKLPDAVEPDAKDEEESPIWA 1547
R+Q+ GQ+ M DN FLR+ TS+ KS V + ++PSS K D EPD++ EEESP
Sbjct: 1481 RSQTFGQRFM----DNLFLRNLTSQPKSSVAEVTVPSSPYKHEDPTEPDSR-EEESPALG 1535
Query: 1548 TIRGKCITQLLLLSAIDSIQRKYWGKLKAPQKIAIMDILLSLLEFSASYNSYSNLRMRMH 1607
IRGKCITQLLLL AI+SIQ+KYW LK PQKIAIMDIL S +EF++SYNSYSNLR RM+
Sbjct: 1536 AIRGKCITQLLLLGAINSIQQKYWSNLKTPQKIAIMDILFSFIEFASSYNSYSNLRTRMN 1595
Query: 1608 HIPAERPPLNLLRQELAGTSIYLDILQKTTS 1638
HIP ERPPLNLLRQEL GT+IYLD+LQKTTS
Sbjct: 1596 HIPTERPPLNLLRQELEGTTIYLDVLQKTTS 1626
|
|
| UNIPROTKB|Q10P53 Os03g0246800 "Sec7 domain containing protein, expressed" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2025502 EDA10 "AT1G01960" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2101906 AT3G60860 "AT3G60860" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0028538 Sec71 "Sec71 ortholog (S. cerevisiae)" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|A8J189 CHLREDRAFT_148829 "SEC7/BIG-like ARF-guanine nucleotide exchange factor" [Chlamydomonas reinhardtii (taxid:3055)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-108 arfgef1 "ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| RGD|1560793 Arfgef1 "ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2442988 Arfgef1 "ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BP90 ARFGEF1 "Brefeldin A-inhibited guanine nucleotide-exchange protein 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| F4IXW2 | BIG5_ARATH | No assigned EC number | 0.7513 | 0.9695 | 0.9890 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00016348001 | SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (1757 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1774 | |||
| PLN03076 | 1780 | PLN03076, PLN03076, ARF guanine nucleotide exchang | 0.0 | |
| pfam01369 | 188 | pfam01369, Sec7, Sec7 domain | 8e-82 | |
| COG5307 | 1024 | COG5307, COG5307, SEC7 domain proteins [General fu | 5e-76 | |
| cd00171 | 185 | cd00171, Sec7, Sec7 domain; Domain named after the | 1e-71 | |
| smart00222 | 189 | smart00222, Sec7, Sec7 domain | 3e-65 | |
| pfam12783 | 166 | pfam12783, Sec7_N, Guanine nucleotide exchange fac | 6e-43 | |
| pfam09324 | 86 | pfam09324, DUF1981, Domain of unknown function (DU | 1e-27 | |
| PLN03076 | 1780 | PLN03076, PLN03076, ARF guanine nucleotide exchang | 7e-08 |
| >gnl|CDD|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional | Back alignment and domain information |
|---|
Score = 1079 bits (2793), Expect = 0.0
Identities = 562/1505 (37%), Positives = 812/1505 (53%), Gaps = 187/1505 (12%)
Query: 59 SSIETEAGAAEKGTEAVQLPAEQTEHIGKTVGVSGSVATALANAG-HTLEAADAELVLNP 117
S + E A + + + T + S+ L + G A++EL+L+P
Sbjct: 31 SKLAHECKAVIERLNSPEKNPPSTSSAAADSASASSLPGPLHDGGSIEYSLAESELILSP 90
Query: 118 LRLAIETKNLKLLESALDCLHKLIAYDHLEGDPGLNGGKNAPLFTDILNMVCGCVDNSSS 177
L A T + K+++ ALDC+ KLIA+ +L G+ +GG A L ++ VC C D
Sbjct: 91 LINACGTGSAKIVDPALDCIQKLIAHGYLRGEADPSGGPEALLLAKLIESVCKCHD-LGD 149
Query: 178 DSTILQVLKVLLTAVASAKFRVHGEPLLGVIRVCYNISLNSKS----------------- 220
+ L VLK LL+AV S R+HG+ LL +R CY+I L SK+
Sbjct: 150 EGIELLVLKTLLSAVTSTSLRIHGDCLLQAVRTCYDIYLGSKNVVNQTTAKASLIQMLVI 209
Query: 221 ------------------------PINQATSKAMLTQMV-SIVVRRMENDQVSTLPTSSG 255
P ++ S +TQ V + + M++ P ++G
Sbjct: 210 VFRRMEADSSTVPIQPIVVAELMEPAEKSDSDTSMTQFVQGFITKIMQDIDGVLNPATAG 269
Query: 256 HTETSSADDASRMPEETTLGDKNKDGMTLGDALTQAKDTPIASVEELHNLAGGADIKGLE 315
+ S A D + ETT + + L D + KD A E+ + + E
Sbjct: 270 KSSGSGAHDGAF---ETTATVETTNPADLLD--STDKDMLDAKYWEISMYKSALEGRKGE 324
Query: 316 AVLDKAVHLEDGKKITRGIDLESMSIG---QQDALLVFRTLCKMGMK-----EDSDEVTT 367
L DG+ + + DLE + IG ++DA LVFR LCK+ MK +D
Sbjct: 325 --------LADGE-VEKDDDLE-VQIGNKLRRDAFLVFRALCKLSMKTPPKEALADPQLM 374
Query: 368 KTRILSLELLQGLLEGVSHSFTKNFHFIDSIKAYLSYALLRASVSQSSVIFQYATGIFSV 427
+ +IL+LELL+ LLE F + F+ +IK YL +LL+ S S +IFQ + IF
Sbjct: 375 RGKILALELLKILLENAGAVFRTSDRFLGAIKQYLCLSLLKNSASSLMIIFQLSCSIFIS 434
Query: 428 LLLRFRESLKGEIGVFFPLIVLRSLDG---SDNNQKTSVLRMIDKVCKDPQMLVDVYVNY 484
L+ RFR LK EIGVFFP+IVLR L+ + QK VLR +DK+C D Q+LVD+++NY
Sbjct: 435 LVSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLDKLCVDSQILVDIFINY 494
Query: 485 DCDLEAPNLFERMVTTLSKIAQGTQNTDPNSVMVSQTTTIKGSSLQCLVNVLKSLVEW-E 543
DCD+ + N+FERMV L K AQG +++ Q +K +++CLV +L+S+ +W
Sbjct: 495 DCDVNSSNIFERMVNGLLKTAQGVPPGVETTLLPPQEAAMKLEAMKCLVAILRSMGDWMN 554
Query: 544 RSRR-----ETKKKN-------ENSLSLAEEVNAKESVEIKSRDDVPDN-------FEKA 584
+ R KK + SL +A N E+ E + E+
Sbjct: 555 KQLRLPDPASLKKLDAVENNLEPGSLPVANG-NGDENGEGSDSHSELSSETSDAATIEQR 613
Query: 585 KAHKSTMEAAISEFNRKPVKGVEYLISNKLVDNDPTSVAQFLRNAANLDKAMIGDYLGQH 644
+A+K ++ IS FNRKP KG+E+LI+ V P +A FL++A+ L+K +IGDYLG+
Sbjct: 614 RAYKLELQEGISLFNRKPKKGIEFLINANKVGESPEEIAAFLKDASGLNKTLIGDYLGER 673
Query: 645 EEFPVAVMHAYVDSMKFSGMKFDTAIRELLKGFRLPGEAQKIDRIMEKFAERYCADNPGL 704
E+ + VMHAYVDS F GM+FD AIR L+GFRLPGEAQKIDRIMEKFAERYC NP
Sbjct: 674 EDLSLKVMHAYVDSFDFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKA 733
Query: 705 FKNADTAYVLAYSVILLNTDAHNPMVWPKMTKSDFVRMNAVNDAEECASTELLEEIYDSI 764
F +ADTAYVLAYSVI+LNTDAHNPMV KM+ DF+R N D + E + +Y+ I
Sbjct: 734 FSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPEEFMRSLYERI 793
Query: 765 VKEEIKMK-DDVAKSSRQKQEGEERGGLVGILNLALPKQKSSTDTKSE-SEAIVKQTQAI 822
K EIKMK DD+ +Q GL ILN+ + K+ D+ E S+ ++K Q
Sbjct: 794 SKNEIKMKEDDLVPQQKQSANSNRILGLDSILNIVIRKRGE--DSYMETSDDLIKHMQEQ 851
Query: 823 FRNQGVKRG-VFYTSNRIELVRPMVEAVGWPLLAAFSVTMEEGENKPRVALCMEGFKAGI 881
F+ + K V+Y + + ++R MVE P+LAAFSV +++ +++ C+EGF+ I
Sbjct: 852 FKEKARKSESVYYAATDVVILRFMVEVCWAPMLAAFSVPLDQSDDEVVTFQCLEGFRHAI 911
Query: 882 HITQVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDTEPDSLQDTWNAV 941
H+T V+ M T R AF+TSL +FT LH+P +++ KN++A++ ++++ D + + LQ+ W +
Sbjct: 912 HVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVSIADEDGNYLQEAWEHI 971
Query: 942 LECVSRLE---FIMSTPAISATVM------LGSNQISKDAVVQSLKE------------- 979
L CVSR E + AT ++ +K ++ LK
Sbjct: 972 LTCVSRFEHLHLLGEGAPPDATFFAAPQNESDKSKQAKSPILPVLKRKGPGKLQYAAAAV 1031
Query: 980 ---------LAGKPA------------------EQV--------FVNSVKLPSDSIVEFF 1004
+ GK + EQV F S KL S++I++F
Sbjct: 1032 RRGSYDSAGVGGKASGVVTSEQMNNLVSNLNMLEQVGSFEMNRIFTRSQKLNSEAIIDFV 1091
Query: 1005 NALCGVSAEELRQ-TPARVFSLQKLVEISYYNMARIRMVWARIWSVLANHFISAGSHHDE 1063
ALC VS EELR + RVFSL K+VEI++YNM RIR+VW+ IW VL++ F++ G +
Sbjct: 1092 KALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSENL 1151
Query: 1064 KIAMYAIDSLRQLSMKYLERAELTNFTFQNDILKPFVVLIRNSRSETIRSLIVDCIVQMI 1123
IA++A+DSLRQLSMK+LER EL N+ FQN+ +KPFV+++R S + IR LI+ C+ QM+
Sbjct: 1152 SIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMV 1211
Query: 1124 KSKVGSIKSGWRSVFMIFTAAADDEVESIVESAFENVEQVILEHFDQVV---GDCFMDCV 1180
S+V ++KSGW+S+FM+FT AA D+ ++IV AFE +E++I E+F + F DCV
Sbjct: 1212 LSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITETETTTFTDCV 1271
Query: 1181 NCLIRFANNKTSHRISLKAIALLRICEDRLAEGLI-------------PGGDLKPIDVET 1227
NCLI F N++ + ISL AIA LR C +LAEG + +
Sbjct: 1272 NCLIAFTNSRFNKDISLNAIAFLRFCATKLAEGDLGSSSRNKDKEAPPSSPQSGKDGKQE 1331
Query: 1228 DATF---DVTEHFWFPMLAGLSDLTSDPRPEVRSCALEVLFDLLNERGSKFSASFWESIF 1284
F D +FWFP+LAGLS+L+ DPRPE+R AL+VLFD L G FS WE +F
Sbjct: 1332 SGEFTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLRNHGHLFSLPLWERVF 1391
Query: 1285 HRVLFPIFDHVRHA--------------GKESLISSEDEWFRETSIHSLQLLCNLFNTFY 1330
VLFPIFD+VRHA + +D W ET +LQL+ +LF FY
Sbjct: 1392 ESVLFPIFDYVRHAIDPSGGDEPEGQGVDGDQGELDQDAWLYETCTLALQLVVDLFVKFY 1451
Query: 1331 KEVCFMLPPLLSLLLDCAKKPDQSVVSISLGALVHLIEVGGHQFSESDWDTLLKSIRDAS 1390
V +L +L LL+ K+P QS+ I + A V L+ GH FS+ W ++ S+++A+
Sbjct: 1452 PTVNPLLKKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGHLFSDEKWLEVVLSLKEAA 1511
Query: 1391 YTTQP 1395
T P
Sbjct: 1512 NATLP 1516
|
Length = 1780 |
| >gnl|CDD|216460 pfam01369, Sec7, Sec7 domain | Back alignment and domain information |
|---|
| >gnl|CDD|227623 COG5307, COG5307, SEC7 domain proteins [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|238100 cd00171, Sec7, Sec7 domain; Domain named after the S | Back alignment and domain information |
|---|
| >gnl|CDD|214569 smart00222, Sec7, Sec7 domain | Back alignment and domain information |
|---|
| >gnl|CDD|221768 pfam12783, Sec7_N, Guanine nucleotide exchange factor in Golgi transport N-terminal | Back alignment and domain information |
|---|
| >gnl|CDD|204198 pfam09324, DUF1981, Domain of unknown function (DUF1981) | Back alignment and domain information |
|---|
| >gnl|CDD|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1774 | |||
| PLN03076 | 1780 | ARF guanine nucleotide exchange factor (ARF-GEF); | 100.0 | |
| KOG0929 | 1514 | consensus Guanine nucleotide exchange factor [Intr | 100.0 | |
| KOG0928 | 1386 | consensus Pattern-formation protein/guanine nucleo | 100.0 | |
| COG5307 | 1024 | SEC7 domain proteins [General function prediction | 100.0 | |
| KOG1848 | 1610 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| KOG0930 | 395 | consensus Guanine nucleotide exchange factor Cytoh | 100.0 | |
| cd00171 | 185 | Sec7 Sec7 domain; Domain named after the S. cerevi | 100.0 | |
| PF01369 | 190 | Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 do | 100.0 | |
| smart00222 | 187 | Sec7 Sec7 domain. Domain named after the S. cerevi | 100.0 | |
| KOG0931 | 627 | consensus Predicted guanine nucleotide exchange fa | 100.0 | |
| KOG1846 | 1777 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| PF12783 | 168 | Sec7_N: Guanine nucleotide exchange factor in Golg | 99.97 | |
| KOG0932 | 774 | consensus Guanine nucleotide exchange factor EFA6 | 99.93 | |
| PF09324 | 86 | DUF1981: Domain of unknown function (DUF1981); Int | 99.84 | |
| PLN03076 | 1780 | ARF guanine nucleotide exchange factor (ARF-GEF); | 96.52 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 94.57 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 94.22 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 93.72 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 91.41 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 89.52 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 89.08 | |
| KOG1241 | 859 | consensus Karyopherin (importin) beta 1 [Nuclear s | 88.63 | |
| KOG1848 | 1610 | consensus Uncharacterized conserved protein [Funct | 87.47 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 85.58 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 84.43 | |
| PF11864 | 464 | DUF3384: Domain of unknown function (DUF3384); Int | 82.06 |
| >PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-307 Score=3040.04 Aligned_cols=1599 Identities=39% Similarity=0.631 Sum_probs=1297.2
Q ss_pred CcccccHHHHHHHHhcccCCCChhHHHHHHHHHHHhhhcCCCCCCccccccccCCCCCCccccccccccccccccCcccc
Q 000257 2 AAGGFVSRAFESMLKECSGKKFPDLQKAIQTYLDNAKEVKPPASSETSEATASAGDGSSIETEAGAAEKGTEAVQLPAEQ 81 (1774)
Q Consensus 2 ~~~~~~~~ale~i~~~~~~kk~~~l~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (1774)
+.++||++|||+|+++|+||||++|++||++||+.+|+...+..++ +.++..+. +
T Consensus 9 ~~~~~~~~ale~i~~~k~~rk~~~l~~a~~~al~~l~~~~~~~~~~--------~~~~~~~~-----------------~ 63 (1780)
T PLN03076 9 RLGKVVSPALEKIIKNASWRKHSKLAHECKAVIERLNSPEKNPPST--------SSAAADSA-----------------S 63 (1780)
T ss_pred hhhHHHHHHHHHHHhhHHhhccHHHHHHHHHHHHHHhccccccccc--------cccccccc-----------------c
Confidence 3578999999999999999999999999999999999766432110 00000000 0
Q ss_pred ccccCcccccchhHHHHHhhhCCCCCccCHHHHHHHHHHHHccCChhHHHHHHHHHHHHhhcCcccCCCCCCCCCCcchH
Q 000257 82 TEHIGKTVGVSGSVATALANAGHTLEAADAELVLNPLRLAIETKNLKLLESALDCLHKLIAYDHLEGDPGLNGGKNAPLF 161 (1774)
Q Consensus 82 ~~~~~~p~~~~~~~~~~l~~~~~~~~~~d~~~i~~Pf~LAc~sks~ki~~~ALdcLqKLis~~~i~~~~~~~~~~~~~li 161 (1774)
..+.++|+.+++. ..++.++|+.||.||++||+||++||+.+|||||||||+||||.|+.++.+++..++|
T Consensus 64 ~~~~~~~~~~~~~---------~~~~~~~~~~i~~pl~lac~s~~~ki~~~ALdcl~KLis~~~i~~~~~~~~~~~~~li 134 (1780)
T PLN03076 64 ASSLPGPLHDGGS---------IEYSLAESELILSPLINACGTGSAKIVDPALDCIQKLIAHGYLRGEADPSGGPEALLL 134 (1780)
T ss_pred ccccccccccccc---------ccccccCHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhcCCCCCCCCCccccHH
Confidence 0011334333221 1234569999999999999999999999999999999999999997766555667899
Q ss_pred HHHHHHHHhhccCCCCchhHHHHHHHHHHHhccccccccchhHHHHHHHHHhhhccCCChhHHHHHHHHHHHHHHHHHhc
Q 000257 162 TDILNMVCGCVDNSSSDSTILQVLKVLLTAVASAKFRVHGEPLLGVIRVCYNISLNSKSPINQATSKAMLTQMVSIVVRR 241 (1774)
Q Consensus 162 ~~iv~tIc~c~~~~~~d~v~LQIlkaLlt~V~s~~~~vhg~~LlkaVrtcyni~l~Sks~vnq~tA~aTLtQmv~~VF~R 241 (1774)
+++|++||+|+++ ++|.|||||||+|+++|+++++.|||++||+|||||||||+.||+++||+||||||||||++||+|
T Consensus 135 d~~i~~Ic~c~~~-~de~iqLqilk~Ll~~v~s~~~~vhg~~LLkaVR~cyni~l~Sks~~nq~tA~atLtQmv~~VF~R 213 (1780)
T PLN03076 135 AKLIESVCKCHDL-GDEGIELLVLKTLLSAVTSTSLRIHGDCLLQAVRTCYDIYLGSKNVVNQTTAKASLIQMLVIVFRR 213 (1780)
T ss_pred HHHHHHHHhhccC-CchHHHHHHHHHHHHHHcCCCceeEHHHHHHHHHHhheeeecCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999975 456699999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCC--CCCccCCCCcccccCCCCCCCCc------------------cccc-ccccCC-CCCchh
Q 000257 242 MENDQVSTLPTSSGHTETS--SADDASRMPEETTLGDKNKDGMT------------------LGDA-LTQAKD-TPIASV 299 (1774)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~-~~~~~~-~~~~~~ 299 (1774)
|+.+.......+....+.. ...+.+..+.....+....+.+. ..+. ...... ....+.
T Consensus 214 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (1780)
T PLN03076 214 MEADSSTVPIQPIVVAELMEPAEKSDSDTSMTQFVQGFITKIMQDIDGVLNPATAGKSSGSGAHDGAFETTATVETTNPA 293 (1780)
T ss_pred hhcccccccccccccccccccccccccccchhhhhhhhhhhhccccccccCcccccccccccccccccccccccCCCCcc
Confidence 9876532211111000000 00000000000000000000000 0000 000000 000000
Q ss_pred hhhhccCCC-Cccchhhh-hhhhhcc---cc--cccc-cccCCcccccChhhhHHHHHHHHHHhccCCCCCc-----hhh
Q 000257 300 EELHNLAGG-ADIKGLEA-VLDKAVH---LE--DGKK-ITRGIDLESMSIGQQDALLVFRTLCKMGMKEDSD-----EVT 366 (1774)
Q Consensus 300 ~~~~~~~~~-~~~~~~~~-~~~~~~~---~~--~~~~-~~~~~~~~~~~~~~kDa~lvFr~LC~Ls~k~~~~-----~~~ 366 (1774)
+.+++.... .+....+. +...+.. .+ ++.. ...+.++...++++||||+|||+|||||+|+.+. .+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDAflvFr~lCkLs~K~~~~~~~~d~~~ 373 (1780)
T PLN03076 294 DLLDSTDKDMLDAKYWEISMYKSALEGRKGELADGEVEKDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEALADPQL 373 (1780)
T ss_pred hhhcccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhHHHHHHHHHHHhCCCCCCCccccHHH
Confidence 000000000 00000000 0000000 00 0000 0000111123679999999999999999998763 368
Q ss_pred hhhhHHHHHHHHHHHhcCCccccCChhhHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHhHHHHHhHHHH
Q 000257 367 TKTRILSLELLQGLLEGVSHSFTKNFHFIDSIKAYLSYALLRASVSQSSVIFQYATGIFSVLLLRFRESLKGEIGVFFPL 446 (1774)
Q Consensus 367 ~rsk~lsLeLl~~iL~~~~~~f~~~~~f~~~ik~~Lc~~Llrn~~S~~~~vF~lsl~if~~Ll~~~r~~Lk~Eievfl~~ 446 (1774)
+|+|++|||||+++|+++|++|.+|+.|+++||+|||.+|+||++|++++||+++|+|||+|+.+||.+||.||||||++
T Consensus 374 ~rsKllsL~Li~~ile~~g~~f~~~~~fi~~ik~~Lc~sL~~n~~S~~~~vf~lsl~If~~L~~~~R~~LK~eievF~~~ 453 (1780)
T PLN03076 374 MRGKILALELLKILLENAGAVFRTSDRFLGAIKQYLCLSLLKNSASSLMIIFQLSCSIFISLVSRFRAGLKAEIGVFFPM 453 (1780)
T ss_pred HHHHHHHHHHHHHHHhcccHhhhcCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCC---ChhhHHHHHHHHHHHhcCchHHHHHHHhcCCCCCCccHHHHHHHHHHHHhccCCCCCCCccccccccc
Q 000257 447 IVLRSLDGS---DNNQKTSVLRMIDKVCKDPQMLVDVYVNYDCDLEAPNLFERMVTTLSKIAQGTQNTDPNSVMVSQTTT 523 (1774)
Q Consensus 447 i~l~~Le~s---~~~qK~~~Le~l~~lc~dp~~lvdiy~NYDCd~~~~nife~lv~~Lsk~a~~~~~~~~~~~~~~~~~~ 523 (1774)
|++++|++. +++||+++|++|.+||+||++++|||+|||||.+++||||+||+.|+|+|+|.++....+..++|++.
T Consensus 454 I~l~ile~~~~~s~~qK~~~L~~L~~lc~dp~~lveiyvNYDCD~~~~NifE~lv~~Lsk~a~~~~~~~~~~~~~~qe~~ 533 (1780)
T PLN03076 454 IVLRVLENVAQPNFQQKMIVLRFLDKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVETTLLPPQEAA 533 (1780)
T ss_pred HHHHHhhcCCCCCHHHHHHHHHHHHHHHhCccHHHHHHhccCCCCCCchHHHHHHHHHHHHhcCCCCccccccCchHHHH
Confidence 999999963 39999999999999999999999999999999999999999999999999986544333345678999
Q ss_pred cccchHHHHHHHHHHHHHHHHHhhh--hh---hcccC---c-chhhhhh---cc---cc----ccccccCCCCchhHHHH
Q 000257 524 IKGSSLQCLVNVLKSLVEWERSRRE--TK---KKNEN---S-LSLAEEV---NA---KE----SVEIKSRDDVPDNFEKA 584 (1774)
Q Consensus 524 l~~~~l~~Lv~il~sl~~w~~~~~~--~~---~~~~~---~-~~~~~~~---~~---~~----~~~~~~~~d~p~~~e~~ 584 (1774)
+|..||+||++||+||++|.+.... .. +.... . ....... +. .+ ..+.....++|++|+++
T Consensus 534 lk~~aLecLv~il~sl~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (1780)
T PLN03076 534 MKLEAMKCLVAILRSMGDWMNKQLRLPDPASLKKLDAVENNLEPGSLPVANGNGDENGEGSDSHSELSSETSDAATIEQR 613 (1780)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCcccccccchhhccccccccccccccccccccccccccccccccCCcHHHHHHH
Confidence 9999999999999999999875421 00 00000 0 0000000 00 00 01122234678899999
Q ss_pred HhhhHHHHHHHHHhhcChhhhHHHHHHCCCCCCChHHHHHHHHhcCCCChHHHHhhhcCCCChHHHHHHHHHHcCCCCCC
Q 000257 585 KAHKSTMEAAISEFNRKPVKGVEYLISNKLVDNDPTSVAQFLRNAANLDKAMIGDYLGQHEEFPVAVMHAYVDSMKFSGM 664 (1774)
Q Consensus 585 k~~K~~~~~~i~~FN~~pkkGi~~L~~~g~i~~~p~~iA~fL~~~~~Ldk~~iGeyLg~~~~~~~~vl~~yv~~~dF~~~ 664 (1774)
|++|..+++|+.+||+|||+||+||+++|+++++|++||+||++++||||++||||||++++++.+||++|++.|||+|+
T Consensus 614 k~~K~~l~~g~~~FN~~Pk~Gi~~L~~~~~i~~~p~~iA~FL~~~~~Ldk~~iGeyLg~~~~~~~~vl~~yv~~fdF~g~ 693 (1780)
T PLN03076 614 RAYKLELQEGISLFNRKPKKGIEFLINANKVGESPEEIAAFLKDASGLNKTLIGDYLGEREDLSLKVMHAYVDSFDFQGM 693 (1780)
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHcCCCCCCHHHHHHHHHhCCCCCHHHHHHHHcCCChHHHHHHHHHHHhCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHHhhcCCCCCCCCCCCCHhHHHhhhc
Q 000257 665 KFDTAIRELLKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVLAYSVILLNTDAHNPMVWPKMTKSDFVRMNA 744 (1774)
Q Consensus 665 ~i~~ALR~fL~~frLPgEaQ~IdRime~Fa~ry~~~Np~~f~s~d~~yvLaysiimLnTDlHn~~vk~kmt~~~Fi~~n~ 744 (1774)
+||+|||.||++||||||+|+||||||+||+|||+|||+.|.++|++|+|+||+||||||+|||+||+|||+++|++|||
T Consensus 694 ~~d~ALR~fL~~FrLPGEaQ~IdRime~Fa~rY~~~Np~~f~~~D~~yvLaysiIMLnTDlHnp~vk~kMt~~~Fi~n~r 773 (1780)
T PLN03076 694 EFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNR 773 (1780)
T ss_pred CHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHhHHhcCCccCCCCCHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccccHHHHHHHHHHhhcccccccchhhhhh-hccccccccccchhhhccccccccCccchhhhhHHHHHHHHHHH
Q 000257 745 VNDAEECASTELLEEIYDSIVKEEIKMKDDVAKSS-RQKQEGEERGGLVGILNLALPKQKSSTDTKSESEAIVKQTQAIF 823 (1774)
Q Consensus 745 ~~d~~~~lp~e~L~~iY~~I~~~ei~l~~e~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~t~~l~ 823 (1774)
|+|+|+|+|+|||++||++|+++||+|++|+.... ++..+.....++..+++.. .|++..+.|+++++.++++++..+
T Consensus 774 gin~g~dlp~e~L~~iY~~I~~~ei~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~r~~~~e~~~~~s~~l~~~~~~~~ 852 (1780)
T PLN03076 774 GIDDGKDLPEEFMRSLYERISKNEIKMKEDDLVPQQKQSANSNRILGLDSILNIV-IRKRGEDSYMETSDDLIKHMQEQF 852 (1780)
T ss_pred CCCCCCCCCHHHHHHHHHHHHhCcccCcccccccccccccccchhhhhHHHHhHh-hHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999999998863211 1111101111222233432 345556778899999999999888
Q ss_pred Hhc-CcccceEEecccccchHHHHHHhhhHHHHHHHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHh
Q 000257 824 RNQ-GVKRGVFYTSNRIELVRPMVEAVGWPLLAAFSVTMEEGENKPRVALCMEGFKAGIHITQVLGMDTMRYAFLTSLVR 902 (1774)
Q Consensus 824 k~~-~~~~~~f~~a~~~~~v~~mf~~~w~p~LaalS~~l~~~~d~~~i~~cLeGf~~~i~ia~~~~l~~~Rdafi~sL~k 902 (1774)
|.. ++..+.|+.+++.+|+||||+++|+|+|||||++|++++|++++.+||+||+.+|+|+|.|||+++||+||++|||
T Consensus 853 k~~~~~~~~~f~~a~~~~~~~~mfe~~W~p~laalS~~~~~s~d~~~~~~cL~G~~~~i~ia~~f~l~~~rdafv~~L~k 932 (1780)
T PLN03076 853 KEKARKSESVYYAATDVVILRFMVEVCWAPMLAAFSVPLDQSDDEVVTFQCLEGFRHAIHVTAVMSMKTHRDAFVTSLAK 932 (1780)
T ss_pred HHhhccccCceeecchHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 754 4456789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCccchhhhhHHHHHHHHhhhccCCChhhhhHHHHHHHHHHhHHhhcC-----CCccc----------c-------
Q 000257 903 FTFLHAPKEMRSKNVEALRTLLALCDTEPDSLQDTWNAVLECVSRLEFIMST-----PAISA----------T------- 960 (1774)
Q Consensus 903 ft~L~~~~em~~KNv~alr~LL~lA~~~Gn~L~~SW~~IL~~isqLe~l~~~-----P~~~~----------~------- 960 (1774)
||.|++|.+|++||++|+|+||+||+++||+|++||++||+|||+||+++.. |+... +
T Consensus 933 fT~L~~~~emk~Knv~Aik~ll~ia~~~Gn~L~~sW~~IL~cISqLerl~Li~~gv~~d~~~~~~~~~~~~~~~~~~~~~ 1012 (1780)
T PLN03076 933 FTSLHSPADIKQKNIDAIKAIVSIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAAPQNESDKSKQAKSPI 1012 (1780)
T ss_pred HcCCCChhhhhHHHHHHHHHHHHHHHHhhhHHHhHHHHHHHHHHHHHHHHHhhcCCCcchhhhccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999832 22100 0
Q ss_pred ------------------cccCCCc-----------cchhHHHH------HHHHhhCCchhhhhhcCCCCChhHHHHHHH
Q 000257 961 ------------------VMLGSNQ-----------ISKDAVVQ------SLKELAGKPAEQVFVNSVKLPSDSIVEFFN 1005 (1774)
Q Consensus 961 ------------------~~~~s~~-----------~s~~~~~~------sl~e~~~~~id~IF~~S~~Ls~eAiv~Fv~ 1005 (1774)
.++++.. ...+.+.. .+..+..+.+|+||++|.+|+++||++||+
T Consensus 1013 ~p~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~i~~~~idkIF~~S~~L~~eai~~fv~ 1092 (1780)
T PLN03076 1013 LPVLKRKGPGKLQYAAAAVRRGSYDSAGVGGKASGVVTSEQMNNLVSNLNMLEQVGSFEMNRIFTRSQKLNSEAIIDFVK 1092 (1780)
T ss_pred ccccccccccccchhhhhhcccccccccccccccccCCHHHHHHHHhhhhhhhhhhhhHHHHHHHhcccCCHHHHHHHHH
Confidence 0000000 00011100 011223457999999999999999999999
Q ss_pred HHHhhcHHhhhcC-CCccchHHHHHHHHhhcccccccchHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhhh
Q 000257 1006 ALCGVSAEELRQT-PARVFSLQKLVEISYYNMARIRMVWARIWSVLANHFISAGSHHDEKIAMYAIDSLRQLSMKYLERA 1084 (1774)
Q Consensus 1006 ALc~vS~eEl~~s-~pr~FsLqKLvEVa~~Nm~Rirl~W~~IW~vl~~hf~~vg~~~n~~va~~AiDsLrQLs~kfLe~e 1084 (1774)
|||+||++||+++ +||+|+|+||||||+|||+|||++|++||+++++||+++|||+|..||+||+|+||||+|||++++
T Consensus 1093 AL~~vS~eEl~~~~~pr~FsLqKLveIa~~Nm~Rirl~W~~iW~~l~~hf~~vg~~~n~~va~fAidsLrQLs~kfle~e 1172 (1780)
T PLN03076 1093 ALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSENLSIAIFAMDSLRQLSMKFLERE 1172 (1780)
T ss_pred HHHHhhHHHHccCCCCchhHHHHHHHHHHhcccchheehHhHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHhcchh
Confidence 9999999999874 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhhHHhhhhhHHHHHhcCchHHHHHHHHHHHHHHHHhccCCcccCcHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 000257 1085 ELTNFTFQNDILKPFVVLIRNSRSETIRSLIVDCIVQMIKSKVGSIKSGWRSVFMIFTAAADDEVESIVESAFENVEQVI 1164 (1774)
Q Consensus 1085 EL~~f~fQ~~fLkPFe~im~~s~~~eIre~IL~cL~qmI~~~~~~IkSGWk~IF~IL~~aa~d~~e~iV~~AF~~l~~I~ 1164 (1774)
|+.||+||++||+||+++|.++.+.+||++|++|+.|||++++++|+||||+||+||+.|+.++++.+|+.||+++++|+
T Consensus 1173 EL~~f~FQkefLkPfe~im~~s~~~eVrE~ILeCv~qmI~s~~~nIkSGWktIF~VLs~aa~d~~e~iV~lAFetl~~I~ 1252 (1780)
T PLN03076 1173 ELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKII 1252 (1780)
T ss_pred hhhchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhcCcHHHHHHHHHHHhCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhh---hhhHHHHHHHHHHHHhccCcccchHHHHHhHHHHHHHhhcccCCCCCC-C-----C---C-C--C-cc-
Q 000257 1165 LEHFDQVV---GDCFMDCVNCLIRFANNKTSHRISLKAIALLRICEDRLAEGLIPGGDL-K-----P---I-D--V-ET- 1227 (1774)
Q Consensus 1165 ~d~~~~l~---~~~f~dlI~cL~~F~~q~~d~nISL~AI~lLw~~~d~L~~~~~~~~~~-~-----~---~-~--~-~~- 1227 (1774)
++||+.++ .++|.|||+||.+|++|..++||||+||++||.|+++++++.+..... . + . . . +.
T Consensus 1253 ~d~f~~l~~~~~~~F~DlV~cL~~Fa~q~~~~nISL~AI~lL~~~~~~La~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 1332 (1780)
T PLN03076 1253 REYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLNAIAFLRFCATKLAEGDLGSSSRNKDKEAPPSSPQSGKDGKQES 1332 (1780)
T ss_pred HhhhhhccccchhHHHHHHHHHHHHHhCcCcccccHHHHHHHHHHHHHHHhccccccccccccccccccccccccccccc
Confidence 99999877 599999999999999999999999999999999999998764311000 0 0 0 0 0 00
Q ss_pred --cCccchhhhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhHHHHHHHhhhhcccccc-
Q 000257 1228 --DATFDVTEHFWFPMLAGLSDLTSDPRPEVRSCALEVLFDLLNERGSKFSASFWESIFHRVLFPIFDHVRHAGKESLI- 1304 (1774)
Q Consensus 1228 --~~~~~~~~~lW~pLL~~Ls~l~~d~R~EVR~~ALqtLF~iL~~~G~~f~~~~W~~If~~VLfPif~~l~~~~~~~~~- 1304 (1774)
....+....+|+|||++|+++++|+|+|||++||+|||++|..||+.|++++|+.||++||||||+.++...+....
T Consensus 1333 ~~~~~~~~~~~lW~pLL~~Ls~l~~D~RlEVR~~ALqtLF~iL~~yG~~Fs~~~W~~if~~VLFPIFd~l~~~~~~~~~~ 1412 (1780)
T PLN03076 1333 GEFTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPSGGD 1412 (1780)
T ss_pred cccccchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 01233446899999999999999999999999999999999999999999999999999999999999865332111
Q ss_pred -------------cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhC
Q 000257 1305 -------------SSEDEWFRETSIHSLQLLCNLFNTFYKEVCFMLPPLLSLLLDCAKKPDQSVVSISLGALVHLIEVGG 1371 (1774)
Q Consensus 1305 -------------~~~~~Wl~eT~~~aL~~lv~LF~~yf~~l~~~L~~~l~lL~~ci~q~n~~ia~ig~~~L~~Li~~~~ 1371 (1774)
.+.++|+.|||++||+++++||++||+.|++||++++.||.+||||+|++|||||++||++||.+||
T Consensus 1413 ~~~~~~~~~~~~~~e~~~Wl~eT~~~AL~~lvdLft~fFd~L~~~L~~~l~ll~~ci~q~n~~la~ig~~~l~~li~~ng 1492 (1780)
T PLN03076 1413 EPEGQGVDGDQGELDQDAWLYETCTLALQLVVDLFVKFYPTVNPLLKKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAG 1492 (1780)
T ss_pred ccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHhh
Confidence 1347899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHhhHHHHHHHHHHHHhhcCchhhhhhcccccchhccccccCCCCCCCCCCCcCCCCCcccCCCCCCCCCCCCCCCC
Q 000257 1372 HQFSESDWDTLLKSIRDASYTTQPLELLNENLKNVTVVIRDSEVGAGEADNNQFGVSDNGKVSTLSSPTIGADGTPRNLN 1451 (1774)
Q Consensus 1372 ~~f~~~~W~~i~~~~~~~~~~t~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1451 (1774)
.+|++++|++||++|+++|++|+|+++ +.+..... +. .+. .+.
T Consensus 1493 ~~F~~~~W~~i~~~~~~lf~~T~p~~~--~~~~~~~~-------~~-----------~~~-----------~~~------ 1535 (1780)
T PLN03076 1493 HLFSDEKWLEVVLSLKEAANATLPDFS--YVVSGEYM-------PA-----------ENI-----------QDS------ 1535 (1780)
T ss_pred ccCCHHHHHHHHHHHHHHHHHhCCchh--hccccccc-------cc-----------ccc-----------ccc------
Confidence 999999999999999999999999953 33311000 00 000 000
Q ss_pred CCCCCCccccccccCCCCCCCCCCCCCccchhhhhhhccccccccccccchhhhhccccccCCCCCCCCCCCCCCCCCCC
Q 000257 1452 TPFSLDHNQEAGLHLDGSEGVPSPSGRAQKTTEAFQRNQSIGQKIMGNMMDNRFLRSFTSKSKSQVPDASIPSSSPKLPD 1531 (1774)
Q Consensus 1452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1531 (1774)
. ++... .. ...+
T Consensus 1536 -~-----~~~~~---------~~-----------------------------------------~~~~------------ 1547 (1780)
T PLN03076 1536 -E-----NAEAA---------SS-----------------------------------------STAD------------ 1547 (1780)
T ss_pred -c-----ccccc---------cc-----------------------------------------cccc------------
Confidence 0 00000 00 0000
Q ss_pred CCCCCccccccchhhHHHH-HHH--HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHhhh
Q 000257 1532 AVEPDAKDEEESPIWATIR-GKC--ITQLLLLSAIDSIQRKYWGKLKAPQKIAIMDILLSLLEFSASYNSYSNLRMRMHH 1608 (1774)
Q Consensus 1532 ~~~~~~~~~~~~~~~~~i~-~kc--v~qLlli~~~~~l~~~~~~~l~~~~l~~l~~~l~~s~~fA~~fN~d~~lR~~L~~ 1608 (1774)
. ......+++.|+.|+ +|| |+||||||+++|||+.||.+||++|+++|++||++||+|||+||+|++||++|||
T Consensus 1548 -~--~~~~~~~~~~~~~i~~~kc~~v~QLllI~~~~~l~~~~~~~l~~~~l~~l~~~L~~s~~fA~~fN~d~~lR~~l~~ 1624 (1780)
T PLN03076 1548 -N--DAEAERSRRLYAAISDAKCRAAVQLLLIQAVMEIYNMYRPRLSAKNTLVLFDALHTVASHAHKINSDTALRSKLQE 1624 (1780)
T ss_pred -c--hhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 0 001112567788888 999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC--CchhhhhhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccccCCCCcccccchhhhHHHHHHHHHHH
Q 000257 1609 IPAERPP--LNLLRQELAGTSIYLDILQKTTSRFNGNGEEIPKSNGSQGVDTTLDDNTSSCITHFDEKLVGIAEEKLVSF 1686 (1774)
Q Consensus 1609 ~~~~~~~--PNLLkQEt~s~a~~l~il~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ie~~l~~~ 1686 (1774)
+|+|+++ |||||||++|+|+||+||||||+|.+. ...+.++|+||+++
T Consensus 1625 ~g~~~~~~~PnLLkqE~~s~~~~l~il~~~~~d~~~------------------------------~~~~~~~~~~l~~~ 1674 (1780)
T PLN03076 1625 LGSMTQMQDPPLLRLENESYQICLTFLQNLILDKPP------------------------------LAKEAEVESRLVEL 1674 (1780)
T ss_pred hhhcccCCCCchhhHhHHHHHHHHHHHHHHhcCCCc------------------------------cchHHHHHHHHHHH
Confidence 9999975 999999999999999999999999531 01267899999999
Q ss_pred HHHHHHHHhhcccc-----------cCCcc--cccchhhcccchhHHHHHHHHHhcCChHHHHhhhhhhHHHHHHHhhcC
Q 000257 1687 CEQVLREASDLQSS-----------VGETT--NMHIHRVLELRSPIIVKVLKGMCLMNNQIFRRHLRDFYPLLVRLICCD 1753 (1774)
Q Consensus 1687 c~~il~~y~~l~~~-----------~~~~~--~~~~~R~~~aw~pvvv~iL~~~~~l~d~~F~~~~~~~y~l~~~l~~~~ 1753 (1774)
|.+||++|..++.. +.|.. .+.+||||+||+||||+||+||++|||++|++|++.||||+|+|++||
T Consensus 1675 c~~il~~y~~l~~~~~~~~~~~~~~~~~~~p~~~~~~r~i~a~~pv~v~il~~~~~l~~~~f~~~~~~~y~l~~~l~~~e 1754 (1780)
T PLN03076 1675 CEEVLQFYIETSTAGQDSEDSSSQQPRWLIPLGSGKRRELAARAPLVVATLQAVCGLGDSSFEKNLVRFFPLLAGLISCE 1754 (1780)
T ss_pred HHHHHHHHHHhhcccccccccccccccccccccchhHHHHHhcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999998741 11211 146799999999999999999999999999999999999999999997
Q ss_pred c--hHHHHHHHHHHHHhhcccCC
Q 000257 1754 Q--MDIRGAVGDLFRMQLKALLP 1774 (1774)
Q Consensus 1754 ~--~e~r~~l~~~~~~~~~~~~~ 1774 (1774)
+ +|||.||+++|++|+||+++
T Consensus 1755 ~~~~e~r~~l~~~~~~rvg~~~~ 1777 (1780)
T PLN03076 1755 HGSNEVQVALSDMLSSWVGPVLL 1777 (1780)
T ss_pred CCCHHHHHHHHHHHHHHhhhhHh
Confidence 4 79999999999999999863
|
|
| >KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0928 consensus Pattern-formation protein/guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5307 SEC7 domain proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1848 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd00171 Sec7 Sec7 domain; Domain named after the S | Back alignment and domain information |
|---|
| >PF01369 Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 domain was named after the first protein found to contain such a region [] | Back alignment and domain information |
|---|
| >smart00222 Sec7 Sec7 domain | Back alignment and domain information |
|---|
| >KOG0931 consensus Predicted guanine nucleotide exchange factor, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1846 consensus Uncharacterized conserved protein, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12783 Sec7_N: Guanine nucleotide exchange factor in Golgi transport N-terminal | Back alignment and domain information |
|---|
| >KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF09324 DUF1981: Domain of unknown function (DUF1981); InterPro: IPR015403 This domain is functionally uncharacterised and found in various plant and yeast protein transport proteins | Back alignment and domain information |
|---|
| >PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1848 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >PF11864 DUF3384: Domain of unknown function (DUF3384); InterPro: IPR024584 This entry represents the N-terminal domain of tuberin which is functionally uncharacterised | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1774 | ||||
| 1r8m_E | 203 | Sec7 Domain Of The Arf Exchange Factor Arno With Br | 5e-47 | ||
| 1r8q_E | 203 | Full-Length Arf1-Gdp-Mg In Complex With Brefeldin A | 1e-46 | ||
| 1r8s_E | 203 | Arf1[delta1-17]-Gdp In Complex With A Sec7 Domain C | 3e-46 | ||
| 3ltl_A | 211 | Crystal Structure Of Human Big1 Sec7 Domain Length | 5e-46 | ||
| 1pbv_A | 195 | Sec7 Domain Of The Exchange Factor Arno Length = 19 | 1e-43 | ||
| 4a4p_A | 192 | Crystal Structure Of The Sec7 Domain From Human Cyt | 3e-41 | ||
| 1bc9_A | 200 | Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average | 3e-41 | ||
| 2r0d_A | 347 | Crystal Structure Of Autoinhibited Form Of Grp1 Arf | 9e-41 | ||
| 2r09_A | 347 | Crystal Structure Of Autoinhibited Form Of Grp1 Arf | 1e-38 | ||
| 3l8n_A | 202 | Crystal Structure Of A Domain Of Brefeldin A-Inhibi | 1e-38 | ||
| 1xsz_A | 356 | The Structure Of Ralf Length = 356 | 4e-24 | ||
| 1xt0_B | 203 | The Structure Of N-Terminal Sec7 Domain Of Ralf Len | 4e-22 | ||
| 1re0_B | 221 | Structure Of Arf1-Gdp Bound To Sec7 Domain Complexe | 5e-22 | ||
| 1ku1_A | 230 | Crystal Structure Of The Sec7 Domain Of Yeast Gea2 | 6e-22 |
| >pdb|1R8M|E Chain E, Sec7 Domain Of The Arf Exchange Factor Arno With Brefeldin A- Sensitizing Mutations Length = 203 | Back alignment and structure |
|
| >pdb|1R8Q|E Chain E, Full-Length Arf1-Gdp-Mg In Complex With Brefeldin A And A Sec7 Domain Length = 203 | Back alignment and structure |
| >pdb|1R8S|E Chain E, Arf1[delta1-17]-Gdp In Complex With A Sec7 Domain Carrying The Mutation Of The Catalytic Glutamate To Lysine Length = 203 | Back alignment and structure |
| >pdb|3LTL|A Chain A, Crystal Structure Of Human Big1 Sec7 Domain Length = 211 | Back alignment and structure |
| >pdb|1PBV|A Chain A, Sec7 Domain Of The Exchange Factor Arno Length = 195 | Back alignment and structure |
| >pdb|4A4P|A Chain A, Crystal Structure Of The Sec7 Domain From Human Cytohesin1 Length = 192 | Back alignment and structure |
| >pdb|1BC9|A Chain A, Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average Structure Length = 200 | Back alignment and structure |
| >pdb|2R0D|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347 | Back alignment and structure |
| >pdb|2R09|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347 | Back alignment and structure |
| >pdb|3L8N|A Chain A, Crystal Structure Of A Domain Of Brefeldin A-Inhibited Guanine Nucleotide-Exchange Protein 2 (Brefeldina-Inhibited Gep 2) From Homo Sapiens (Human). Northeast Structural Genomics Consortium Target Id Hr5562a Length = 202 | Back alignment and structure |
| >pdb|1XSZ|A Chain A, The Structure Of Ralf Length = 356 | Back alignment and structure |
| >pdb|1XT0|B Chain B, The Structure Of N-Terminal Sec7 Domain Of Ralf Length = 203 | Back alignment and structure |
| >pdb|1RE0|B Chain B, Structure Of Arf1-Gdp Bound To Sec7 Domain Complexed With Brefeldin A Length = 221 | Back alignment and structure |
| >pdb|1KU1|A Chain A, Crystal Structure Of The Sec7 Domain Of Yeast Gea2 Length = 230 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ltl_A Brefeldin A-inhibited guanine nucleotide-exchange 1; all alpha, guanine-nucleotide releasing factor, signaling PR; 2.20A {Homo sapiens} PDB: 3l8n_A 3swv_A Length = 211 | Back alignment and structure |
|---|
Score = 293 bits (752), Expect = 4e-91
Identities = 91/204 (44%), Positives = 123/204 (60%), Gaps = 2/204 (0%)
Query: 573 SRDDVPDNFEKAKAHKSTMEAAISEFNRKPVKGVEYLISNKLVDNDPTSVAQFLRNAANL 632
FE K K +E I FN+KP +G++YL ++ P +AQFL L
Sbjct: 4 HHHHHGTQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERL 63
Query: 633 DKAMIGDYLGQHEEFPVAVMHAYVDSMKFSGMKFDTAIRELLKGFRLPGEAQKIDRIMEK 692
D +G++LG +++F VM+AYVD FSG F +A+R L+GFRLPGEAQKIDR+MEK
Sbjct: 64 DSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLMEK 123
Query: 693 FAERYCADNP--GLFKNADTAYVLAYSVILLNTDAHNPMVWPKMTKSDFVRMNAVNDAEE 750
FA RY N LF +ADTAYVLAYS+I+L TD H+P V KMTK +++MN + +
Sbjct: 124 FAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSK 183
Query: 751 CASTELLEEIYDSIVKEEIKMKDD 774
E L IY+ I ++I MK+
Sbjct: 184 DLPEEYLSAIYNEIAGKKISMKET 207
|
| >1r8s_E ARNO; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Homo sapiens} SCOP: a.118.3.1 PDB: 1r8m_E* 1r8q_E* 1s9d_E* 1pbv_A 1bc9_A Length = 203 | Back alignment and structure |
|---|
| >1xsz_A Guanine nucleotide exchange protein; ARF guanine nucleotide exchange factor, signaling protein; 1.41A {Legionella pneumophila} SCOP: a.118.3.1 d.129.9.1 PDB: 1xt0_B Length = 356 | Back alignment and structure |
|---|
| >2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* Length = 347 | Back alignment and structure |
|---|
| >1ku1_A ARF guanine-nucleotide exchange factor 2; SEC7 domain, guanine nucleotide exchange factor (GEF), ARF small GTP-binding proteins; 1.93A {Saccharomyces cerevisiae} SCOP: a.118.3.1 PDB: 1re0_B* Length = 230 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1774 | ||||
| d1r8se_ | 187 | a.118.3.1 (E:) Exchange factor ARNO {Human (Homo s | 8e-75 | |
| d1xsza1 | 197 | a.118.3.1 (A:1-197) RalF, N-terminal domain {Legio | 1e-67 | |
| d1ku1a_ | 211 | a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 | 3e-66 |
| >d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Sec7 domain family: Sec7 domain domain: Exchange factor ARNO species: Human (Homo sapiens) [TaxId: 9606]
Score = 244 bits (624), Expect = 8e-75
Identities = 89/185 (48%), Positives = 120/185 (64%)
Query: 590 TMEAAISEFNRKPVKGVEYLISNKLVDNDPTSVAQFLRNAANLDKAMIGDYLGQHEEFPV 649
M +FN P KG+++L+ N+L+ N P +A+FL L+K IGDYLG+ EE +
Sbjct: 3 KMAMGRKKFNMDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNL 62
Query: 650 AVMHAYVDSMKFSGMKFDTAIRELLKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNAD 709
AV+HA+VD +F+ + A+R+ L FRLPG+AQKIDR+ME FA+RYC NPG+F++ D
Sbjct: 63 AVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGKAQKIDRMMEAFAQRYCLCNPGVFQSTD 122
Query: 710 TAYVLAYSVILLNTDAHNPMVWPKMTKSDFVRMNAVNDAEECASTELLEEIYDSIVKEEI 769
T YVL+YSVI+LNTD HNP V KM FV MN + ELL +YDSI E
Sbjct: 123 TCYVLSYSVIMLNTDLHNPNVRDKMGLERFVAMNRGINEGGDLPEELLRNLYDSIRNEPF 182
Query: 770 KMKDD 774
K+ +D
Sbjct: 183 KIPED 187
|
| >d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]} Length = 197 | Back information, alignment and structure |
|---|
| >d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 211 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1774 | |||
| d1ku1a_ | 211 | ARF guanine-exchange factor 2, Gea2 {Baker's yeast | 100.0 | |
| d1r8se_ | 187 | Exchange factor ARNO {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1xsza1 | 197 | RalF, N-terminal domain {Legionella pneumophila [T | 100.0 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 98.49 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 97.92 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 97.57 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 97.19 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 97.05 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 96.69 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 96.59 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 95.13 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 94.66 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 93.91 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 93.56 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 93.42 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 92.78 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 91.68 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 90.3 |
| >d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Sec7 domain family: Sec7 domain domain: ARF guanine-exchange factor 2, Gea2 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=418.37 Aligned_cols=187 Identities=35% Similarity=0.580 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC-CHHHHHHHHH-HCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCC
Q ss_conf 9854699999999960491566899997899889-9599999977-0479995889831057987279999999970899
Q 000257 584 AKAHKSTMEAAISEFNRKPVKGVEYLISNKLVDN-DPTSVAQFLR-NAANLDKAMIGDYLGQHEEFPVAVMHAYVDSMKF 661 (1774)
Q Consensus 584 ~k~~K~~l~~~i~~FN~kpkkGI~~L~~~g~i~~-~p~~iA~fL~-~~~~Ldk~~iGeyLg~~~~~~~~vl~~yv~~~dF 661 (1774)
.++||..+.+|+.+||+|||+||+||+++|++.+ +|++||+||+ .+++|||.+||||||+++ |.+||++|++.|||
T Consensus 8 ~~~rK~~~~~~v~~FN~~pk~Gi~~L~~~~~i~~~~~~~iA~FL~~~~~~Ldk~~iGeyLg~~~--n~~vL~~y~~~fdf 85 (211)
T d1ku1a_ 8 HMDRKTEFIECTNAFNEKPKKGIPMLIEKGFIASDSDKDIAEFLFNNNNRMNKKTIGLLLCHPD--KVSLLNEYIRLFDF 85 (211)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSSSCSSHHHHHHHHHHTTTTSCHHHHHHHHTCGG--GHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCC--HHHHHHHHHHCCCC
T ss_conf 8999999999999980499999999998888499998999999986578889899999977984--68999999852476
Q ss_pred CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC---------------CCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 99871699999970178998558999999999999986199---------------999982379999999998403788
Q 000257 662 SGMKFDTAIRELLKGFRLPGEAQKIDRIMEKFAERYCADNP---------------GLFKNADTAYVLAYSVILLNTDAH 726 (1774)
Q Consensus 662 ~~~~~~~ALR~fl~~frLPgEaQ~IdRime~Fa~ry~~~Np---------------~~f~sad~~yvLaysiimLnTDlH 726 (1774)
+|++||+|||.||.+||||||+|+|||+|++||+|||+||| ..|.++|++|+|+||+||||||+|
T Consensus 86 ~~~~id~ALR~~l~~f~LPgEaQ~IdRile~Fa~~Y~~~N~~~~~~~~~~~~~~~~~~f~s~d~~y~L~ysiimLnTdlH 165 (211)
T d1ku1a_ 86 SGLRVDEAIRILLTKFRLPGESQQIERIIEAFSSAYCENQDYDPSKISDNAEDDISTVQPDADSVFILSYSIIMLNTDLH 165 (211)
T ss_dssp TTCCHHHHHHHHTTTCCCCSSHHHHHHHHHHHHHHHHHTSCCCGGGCCSCCTTCGGGCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 89978999999998450886089999999998499996288884100000000111122571089999999999700203
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 9988899997677762036898862319999999999630435555
Q 000257 727 NPMVWPKMTKSDFVRMNAVNDAEECASTELLEEIYDSIVKEEIKMK 772 (1774)
Q Consensus 727 n~~vk~kmt~~~Fi~~n~~~~~~~~lp~e~L~~iY~~I~~~~i~l~ 772 (1774)
||++|+|||+++|++|+||+++|+|+|+++|++||++|+.+||+||
T Consensus 166 np~vk~kMt~~~Fi~n~rgin~~~d~~~e~L~~iY~~I~~~ei~lP 211 (211)
T d1ku1a_ 166 NPQVKEHMSFEDYSGNLKGCCNHKDFPFWYLDRVYCSIRDKEIVMP 211 (211)
T ss_dssp CTTCSSCCCHHHHHHHTTTCBTTBCCCHHHHHHHHHHHHHSCCCCC
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 8755678899999999866767788999999999999985877799
|
| >d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
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| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|