Citrus Sinensis ID: 000341

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620------1630----
MDQNQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPLLIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVNSSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWLVTWDQKQQGIDESDGKSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVFTYDMISEAVIDRIVELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS
cccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHcccHHHHcccccccccccHHHccHHHHHHccccHHHHHHHHHHHHEEEEEcccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHcccccHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccHHHHccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccEEHHHHHHHHccccccHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccHHHHHHHHHHccccccccccHHHHHcccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccHHHccHHHHHHHccccccHHHHHHHHHHHHccccccHHHHccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHEEEEccccccccccccccHHHHHccHHHHcccHHHHHHHHccccccccccccccccccccccc
************************QFHPARAAIIDLFNLYLG*************PPLLIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQ*****QLRSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLL***********************************************************************************************SVRDNAISSLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWLVTWDQKQQG*****GKSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVFTYDMISEAVIDRIVELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLR****************VSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSP************************FVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQ**SKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAAT*********
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MDQNQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPLLIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVNSSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWLVTWDQKQQGIDESDGKSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVFTYDMISEAVIDRIVELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Mediator of RNA polymerase II transcription subunit 23 Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity).confidentF4I4P3

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!