Citrus Sinensis ID: 000393

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------158
MENRVGNSDGTAIPKKARSLDLKSLYKSGTSMESQHKDVKRKISKEDGDDEKSNKRKKSSKTVSISRLKNVDNSKRSVDGVYNGVVSSGSVDLKDLKCHNSCSGFNGISFSLDNSGVRIPKRKRGFVGRKKVEVDQVLKLPEHSCSKASIIDQAAKVTGDDSGTRDNSSRDSDPRVESSKDLGELFEPSKFKRKDSDDFKENWNGELHSARHLQEGECAIRSVVNHGESSLKKEKRRSKSNSNRHLKEGGHACYSVLNNGQSLLKKPNGVTNSNSGQCLKEENEGASHSVLNNSNSSLKESRRNNSKRKDSARHKKSVAKEAEHVINASGNVSNIKDSDHDRSVGKEAEPLVDASAKVSKRKDFSQDKISVAKEADILIDTSGKACDNLLEDEENLEENAAMMLSSRFDPSCTGFSSNGKSIVSPNGLSFLLSSGQGPGSHDSSLLDAAGRALRPRTHHREKGHSRKRRHYYEIFSGDLDGFWVLKRRIKVFWPLDQCWYYGLVDDYDKGKKLHHVKYDDRDEEWINLENERFKLLLLPSEVPGKAARRRSRKRVNSVDEGKLSLKSSKEKEKRNLNTEEENCMGSYMESEPIISWLARSTHRVKSSPTPAMKKQKISDLYPTSGPPFLANKVGNAHGLDADSKTSKFSSNSKLPDRFTDGGRGEESTSENPTCSKDSGLPIVYYRRRFRKTGSSLCSTSSGNNISSSTPASVTLLSSSIGEFWDFEEHDTFCKREVSNGASWSTTTGSGRVGLTIPLIDPKQARFKFSFPVLSILNYAFEAENLWLVHEVFLLHYGKLITMWPSVQLEMLFVDNVVGLRYFLFEDCLKQAVGYVFLVLSLFHQPNVLGKSSDRQLPVTSIRFKFSCFQNLSKQFVFAFYNFAEVKNSTWMYMDSKLKRHCLLTRQLPLSECTNDNIKVLQNGGNLLSTAAVCWDDSSTKGLQRISKQRTYLMGVPKQSARVKVGWCSSNLDKQRNLPPFVLSFTAAPSFFISLHLKLLMEHSGAGMSLHGQESTECAGSGCLIADESTYENNVPQCTLELNMSKSLDYNMMVMSKDAASHECSPAATSKLEAVSSSVCGDESWTRSPQICRNSSTNVAGTSASSQEPEQIGNEAIVPLQKLQYHDPKSEQCVLLPRPSSGDCDKTDTAYNSPLNSIRVEIPTFDQFEKHDREYHSVQCTTDLNWNMNGGIVPSLNPTAPRSTGHRNRSSSSFGYLAHGWSVEKADVAHSSFGSAPKKPRTQVSYSLPFGGYYSPKNRVNHQKGLPHMRIRRANEKRLSDVSRVSKKNLELLPCDANVLIVHGDKGWRECGAQIALELFEHNEWKLAVKLSGTTRFSYKAHQFLQPGSTNRYTHAMMWKGGKDWILEFPDRSQWALFKEMHEECYNRNIRAASVKNIPIPGVCLIEEFDDNVTEVAFVRSSSKYFRQVETDVEMALDPSRVLYDMDSDDEQWLLKIRSSSEADDCGLSEISEEIFEKIIDIFEKAAYSQQRDQFTSNEIEELMAGVGSMEAIKVIYEHWRQKRLKKGMPLIRHLQVTSELIACLICHEFIACGSVVTSFSPLYDMIYLRFHVMSLVLLE
cccccccccccccccccccccccccccccccHHHcccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccHHHHHccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccEEEEEEEEccccccEEEEcccccccEEEccccEEEEEEcccccccHHHHccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEccEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEEEEccccccEEEEEEEEEcccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccHHHHHHHHHHcccccHHHccccccccccccEEEEEccccEEEcccEEEEEEcccccEEEEEEEccEEEEEcccccccccccccccccEEEEEccccEEEEcccccHHHHHHHHHHHHHHHcccccccccccccccEEEcccccccccccccccccccEEEcccHHHHccccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHEEEEcc
cccccccccccEcccccccccHHHHHcccccHHHHHcccEEEccccccccccccccccccEEEEEEccccccccccccccEccccccccccccHEEccccccccccEEEEEcccccEEcccccccccccEEcccccEEEcccccccHHHHHHccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccEccccEEEEcccccccccccccccccccccccccccccccccccccccEEEcccccccccccHHHcccccccccccccccccccHHHHccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccHHHHcccEEEEEcccccHHEEEEEEEcccccccEEEEEccccEEEEEccccEEEEEEcccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccHEHHHHHEHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEEEEcccccccEEEEEEEEEccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccccccccccccccccccccccEcccccccEEEcccccccccEEcccccccccccccccHEEHcccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEcccccccccccHcccccccccccccccHHHcccccccccccccccHHHHcccccccccccccccccccccccEccccHccccccHHHHcccccccccccccccccccccccccEEEEEEcccccccccccccccccccccHEcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccccEEEEccccccccccccccccccccEcEEEEEEEEcccccEEcccEEEEEEcccccEEEEEEEcccEEEEEccHHcccccccccccHHEEEEcccccEEEcccHHHHHHHHHHHHHHHHcccccccccEcccccEEEEccccccccccccccccccEEEEccccHHHccccccEEEccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccEEEEEEcccHcEEEEEEEEEEEcccEEEEcccHHHHHHHHHHHHHHHHcc
menrvgnsdgtaipkkARSLDLKSLyksgtsmesqHKDVKRKiskedgddeksnkrkksskTVSISRlknvdnskrsvdgVYNGVVSsgsvdlkdlkchnscsgfngisfsldnsgvripkrkrgfvgrkkvevdqvlklpehscskaSIIDQAakvtgddsgtrdnssrdsdprvesskdlgelfepskfkrkdsddfkenwngeLHSARHLQEGECAIRSVVnhgesslkkekrrsksnsnrhlkegGHACYSVLNNgqsllkkpngvtnsnsgqclkeenegashsvlnnsnsslkesrrnnskrkdsaRHKKSVAKEAEHVINasgnvsnikdsdhdrsvgkeaeplvdasakvskrkdfsqdkisvaKEADILIDTSGKACDNLLEDEENLEENAAMMLssrfdpsctgfssngksivspnglsfllssgqgpgshdssLLDAAgralrprthhrekghsrkrrhYYEIFSGDLDGFWVLKRRIKvfwpldqcwyyglvddydkgkklhhvkyddrdeEWINLENERFKLlllpsevpgkaarrrsrkrvnsvdegklsLKSSKEKEKRNlnteeencmgsymesePIISWLARsthrvkssptpamkkqkisdlyptsgppflankvgnahgldadsktskfssnsklpdrftdggrgeestsenptcskdsglpivYYRRRfrktgsslcstssgnnissstpASVTLLSSSigefwdfeehdtfckrevsngaswstttgsgrvgltiplidpkqarfkfsfpVLSILNYAFEAENLWLVHEVFLLHYGKLITMWPSVQLEMLFVDNVVGLRYFLFEDCLKQAVGYVFLVLSLfhqpnvlgkssdrqlpvtsiRFKFSCFQNLSKQFVFAFYNFAEVKNSTWMYMDSklkrhclltrqlplsectndNIKVLQNGGNLLSTAAvcwddsstkglQRISKQRTYlmgvpkqsarvkvgwcssnldkqrnlppfvlsftaaPSFFISLHLKLLMEhsgagmslhgqestecagsgcliadestyennvpqctlELNMSKSLDYNMmvmskdaashecspaatsKLEAvsssvcgdeswtrspqicrnsstnvagtsassqepeqigneaivplqklqyhdpkseqcvllprpssgdcdktdtaynsplnsirveiptfdqfekhdreyhsvqcttdlnwnmnggivpslnptaprstghrnrssssfgylahgwsvekadvahssfgsapkkprtqvsyslpfggyyspknrvnhqkglphmrIRRAnekrlsdvsrvskknlellpcdanvlivhgdkgwrECGAQIALELFEHNEWKLAVKLSgttrfsykahqflqpgstnrytHAMMWKGGkdwilefpDRSQWALFKEMHEECYNRNIraasvknipipgvclieefddnvTEVAFVRSSSKYFRQVETDVemaldpsrvlydmdsdDEQWLLKIrssseaddcglsEISEEIFEKIIDIFEKAAYSQQRDQFTSNEIEELMAGVGSMEAIKVIYEHWRQKRLkkgmplirHLQVTSELIACLICHEfiacgsvvtsfsplydMIYLRFHVMSLVLLE
menrvgnsdgtaipkkarslDLKSlyksgtsmesqhkdvkrkiskedgddeksnkrkkssktvsisrlknvdnskrsvdgvYNGVVSSGSVDLKDLKCHNSCSGFNgisfsldnsgvripkrkrgfvgrkkvevdqvlklpehscskasiidqaakvtgddsgtrdnssrdsdprvesskdlgelfepskfkrkdsddfKENWNGELHSARHLQEGECAIRSvvnhgesslkkekrrsksnsnrhlkeggHACYSVLNNGQSLLKKPNGVTNSNSGQCLKEenegashsvlnnsnsslkesrrnnskrkdsarhkksvAKEAehvinasgnvsnikdsdhdrsvgkeaeplvdasakvskrkdfsqdkisvakeadilidTSGKACDNLLEDEENLEENAAMMLSSRFDPSCTGFSSNGKSIVSPNGLSFLLSSGQGPGSHDSSLLDAagralrprthhrekghsrkrrhyyeifsgdldgfWVLKRRIKVFWPLDQCWYYGLVDDYDKGKKLHHVKYDDRDEEWINLENErfkllllpsevpgkaarrrsrkrvnsvdegklslksskekekrnlnteeencmgsymESEPIISWLARSTHRVkssptpamkkqkISDLYPTSGPPFLANKVGNAHGLDAdsktskfssnsklpdrftdggrgeestsenptcskdsglpIVYYRRRFRKTGSslcstssgnnissstpASVTLLSSSIGEFWDFEEHDTFCKREvsngaswstttgsgrvglTIPLIDPKQARFKFSFPVLSILNYAFEAENLWLVHEVFLLHYGKLITMWPSVQLEMLFVDNVVGLRYFLFEDCLKQAVGYVFLVLSLFHQPNVLGKSSDRQLPVTSIRFKFSCFQNLSKQFVFAFYNFAEVKNSTWMYMDSKLKRHCLLTRQLPLSECTNDNIKVLQNGGNLLSTAAVCWDDSSTKGLQRISKQrtylmgvpkqsarVKVGWCSSNLDKQRNLPPFVLSFTAAPSFFISLHLKLLMEHSGAGMSLHGQESTECAGSGCLIADESTYENNVPQCTLELNMSKSLDYNMMVMSKDAASHECSPAATSKLEAVSSSVCGDESWTRSPQICRNSSTNVAGTSASSQEPEQIGNEAIVPLQKLQYHDPKSEQCVLLPRPSSGDCDKTDtaynsplnsirvEIPTFDQFEKHDREYHSVQCTTDLNWNMNGGIVPSLNPTAPRSTGHRNRSSSSFGYLAHGWSVEKADVAHSsfgsapkkprtqVSYSLPfggyyspknrvnhqkglphmrirranekrlsdvsrvskknlellpcdaNVLIVHGDKGWRECGAQIALELFEHNEWKLAVKLSGTTRFSYKAHQflqpgstnrYTHAMMWKGGKDWILEFPDRSQWALFKEMHEECYNRNIRAASVKNIPIPGVCLIEEFDDNVTEVAFVRssskyfrqvetdvemaldPSRVLYDMDSDDEQWLLKIRssseaddcglSEISEEIFEKIIDIFEKAAYSQQRDQFTSNEIEELMAGVGSMEAIKVIYEHWRQKRLKKGMPLIRHLQVTSELIACLICHEFIACGSVVTSFSPLYDMIYLRFHVMSLVLLE
MENRVGNSDGTAIPKKARSLDLKSLYKSGTSMESQHKDVKRKISKEDGDDEKSNKRKKSSKTVSISRLKNVDNSKRsvdgvyngvvssgsvDLKDLKCHNSCSGFNGISFSLDNSGVRIPkrkrgfvgrkkvEVDQVLKLPEHSCSKASIIDQAAKVTGDDSGTRDNSSRDSDPRVESSKDLGELFEPskfkrkdsddfkENWNGELHSARHLQEGECAIRSVVNHGesslkkekrrsksnsnrhlkEGGHACYSVLNNGQSLLKKPNGVTNSNSGQCLKEENEGASHSVlnnsnsslkesrrnnskrkDSARHKKSVAKEAEHVINASGNVSNIKDSDHDRSVGKEAEPLVDASAKVSKRKDFSQDKISVAKEADILIDTSGKACdnlledeenleenAAMMLSSRFDPSCTGFSSNGKSIVSPNGLSFLLSSGQGPGSHDSSLLDAAGRALRPRTHHREKGHSRKRRHYYEIFSGDLDGFWVLKRRIKVFWPLDQCWYYGLVDDYDKGKKLHHVKYDDRDEEWINLENERFKLLLLPSEVPGKAARRRSRKRVNSVDEGklslksskekekRNLNTEEENCMGSYMESEPIISWLARSTHRVKSSPTPAMKKQKISDLYPTSGPPFLANKVGNAHGLDADSKTSKFSSNSKLPDRFTDGGRGEESTSENPTCSKDSGLPIVYYRRRFRKTgsslcstssgnnissstpasVTLLSSSIGEFWDFEEHDTFCKREVSNGASWSTTTGSGRVGLTIPLIDPKQARFKFSFPVLSILNYAFEAENLWLVHEVFLLHYGKLITMWPSVQLEMLFVDNVVGLRYFLFEDCLKQAVGYVFLVLSLFHQPNVLGKSSDRQLPVTSIRFKFSCFQNLSKQFVFAFYNFAEVKNSTWMYMDSKLKRHCLLTRQLPLSECTNDNIKVLQNGGNLLSTAAVCWDDSSTKGLQRISKQRTYLMGVPKQSARVKVGWCSSNLDKQRNLPPFVLSFTAAPSFFISLHLKLLMEHSGAGMSLHGQESTECAGSGCLIADESTYENNVPQCTLELNMSKSLDYNMMVMSKDAASHECSPAATSKLEAVSSSVCGDESWTRSPQICRNSSTNVAGTSASSQEPEQIGNEAIVPLQKLQYHDPKSEQCVLLPRPSSGDCDKTDTAYNSPLNSIRVEIPTFDQFEKHDREYHSVQCTTDLNWNMNGGIVPSLNPTAPRSTGHRNRSSSSFGYLAHGWSVEKADVAHSSFGSAPKKPRTQVSYSLPFGGYYSPKNRVNHQKGLPHMRIRRANEKRLSDVSRVSKKNLELLPCDANVLIVHGDKGWRECGAQIALELFEHNEWKLAVKLSGTTRFSYKAHQFLQPGSTNRYTHAMMWKGGKDWILEFPDRSQWALFKEMHEECYNRNIRAASVKNIPIPGVCLIEEFDDNVTEVAFVRSSSKYFRQVETDVEMALDPSRVLYDMDSDDEQWLLKIRSSSEADDCGLseiseeifekiidifekAAYSQQRDQFTSNEIEELMAGVGSMEAIKVIYEHWRQKRLKKGMPLIRHLQVTSELIACLICHEFIACGSVVTSFSPLYDMIYLRFHVMSLVLLE
******************************************************************************DGVYNGVVSSGSVDLKDLKCHNSCSGFNGISFSLDNSGVRIPKRKRGFVGRKKVEVDQVLKL****************************************************************************************************************CYSVL**********************************************************************************************************************DILID****************************************************************************************RHYYEIFSGDLDGFWVLKRRIKVFWPLDQCWYYGLVDDYDKGKKLHHVKYDDRDEEWINLENERFKLLLL******************************************************IISWL**********************************************************************************LPIVYYRRRFR***********************TLLSSSIGEFWDFEEHDTFCKREVSNGASWSTTTGSGRVGLTIPLIDPKQARFKFSFPVLSILNYAFEAENLWLVHEVFLLHYGKLITMWPSVQLEMLFVDNVVGLRYFLFEDCLKQAVGYVFLVLSLFHQPNVLGKSSDRQLPVTSIRFKFSCFQNLSKQFVFAFYNFAEVKNSTWMYMDSKLKRHCLLTRQLPLSECTNDNIKVLQNGGNLLSTAAVCWDDSSTKGLQRISKQRTYLMGVPKQSARVKVGWCSSNLDKQRNLPPFVLSFTAAPSFFISLHLKLLMEHSGAGM*L******ECAGSGCLIADESTYENNVPQCTLELN***************************************************************************************************************LNSIRVEIPTFDQFEKHDREYHSVQCTTDLNWNMNGGIV********************FGYLAHGWSVE***********************LPFGGYY**********************************NLELLPCDANVLIVHGDKGWRECGAQIALELFEHNEWKLAVKLSGTTRFSYKAHQFLQPGSTNRYTHAMMWKGGKDWILEFPDRSQWALFKEMHEECYNRNIRAASVKNIPIPGVCLIEEFDDNVTEVAFVRSSSKYFRQVETDVEMALDPSRVLYDMDSDDEQWLLKIR*****DDCGLSEISEEIFEKIIDIFEKAAYSQQRDQFTSNEIEELMAGVGSMEAIKVIYEHWRQKRLKKGMPLIRHLQVTSELIACLICHEFIACGSVVTSFSPLYDMIYLRFHVMSLVL**
**************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************WVLKRRIKVFWPLDQCWYYGLVDDYDKGKKLHHVKYDDRDEEWINLENER**************************************************************************************************************************************************************************************************************************RVGLTIPLIDPKQARFKFSFPVLSILNYAFEAENLWLVHEVFLLHYGKLITMWPSVQLEMLFVDNVVGLRYFLFEDCLKQAVGYVFLVLSLFHQPNVLGKSSDRQLPVTSIRFKFSCFQNLSKQFVFAFYNFAEVKNSTWMYMDSKLKRHCLLTRQLPLSECTNDNIKVLQNGGNLLSTAAVCW******************MGVPKQSARVKVGW*SS*****RNLPPFVLSFTAAPSFFISLHLKLLMEHSGAGMSLHG****************************************MVMSKDAASH***********************************************************KL*************************************************************************************************************************************************************************LPCDANVLIVHGDKGWRECGAQIALELFEHNEWKLAVKLSGTTRFSYKAHQFLQPGSTNRYTHAMMWKGGKDWILEFPDRSQWALFKEMHE**************IPIPGVCLIEEFDDNVTEVAFVRSSSKYFRQVETDVEMALDPSRVLYDMDSDDEQWLLKIR************ISEEIFEKIIDIFEKAAYSQQRDQFTSNEIEELMAGVGSMEAIKVIYEHWRQKRLKKGMPLIRHLQVTSELIACLICHEFIACGSVVTSFSPLYDMIYLRFHVMSLVLLE
**********TAIPKKARSLDLKSLYKS*************************************SRLKNVDNSKRSVDGVYNGVVSSGSVDLKDLKCHNSCSGFNGISFSLDNSGVRIPKRKRGFVGRKKVEVDQVLKLPEHSCSKASIIDQAA*************************DLGELFEPSKFKRKDSDDFKENWNGELHSARHLQEGECAIRSVVN********************LKEGGHACYSVLNNGQSLLKKPNGVTNSNSGQCLKEENEGASHSVLNN****************************AEHVINASGNVSNIKDSDHDRSVGKEAEPL**************QDKISVAKEADILIDTSGKACDNLLEDEENLEENAAMMLSSRFDPSCTGFSSNGKSIVSPNGLSFLLS**********SLLDAAGRALR*************RRHYYEIFSGDLDGFWVLKRRIKVFWPLDQCWYYGLVDDYDKGKKLHHVKYDDRDEEWINLENERFKLLLLPSEV*********************SLKSSKEKEKRNLNTEEENCMGSYMESEPIISWLARS**************QKISDLYPTSGPPFLANKVGNAHGLDADSKTSKFSSNSKLPDR*****************SKDSGLPIVYYRRRFRKT*******************SVTLLSSSIGEFWDFEEHDTFCKREVSNGASWSTTTGSGRVGLTIPLIDPKQARFKFSFPVLSILNYAFEAENLWLVHEVFLLHYGKLITMWPSVQLEMLFVDNVVGLRYFLFEDCLKQAVGYVFLVLSLFHQPNVLGKSSDRQLPVTSIRFKFSCFQNLSKQFVFAFYNFAEVKNSTWMYMDSKLKRHCLLTRQLPLSECTNDNIKVLQNGGNLLSTAAVCWDDSSTKGLQRISKQRTYLMGVPKQSARVKVGWCSSNLDKQRNLPPFVLSFTAAPSFFISLHLKLLMEHSGA***********CAGSGCLIADESTYENNVPQCTLELNMSKSLDYNMMVMS**********************************ICRNS***************QIGNEAIVPLQKLQYHDPKSEQCVLLPRPSSGDCDKTDTAYNSPLNSIRVEIPTFDQFEKHDREYHSVQCTTDLNWNMNGGIVPSLNPT************SSFGYLAHGWSVEKADVAHSSFGSAPKKPRTQVSYSLPFGGYYSPKNRVNHQKGLPHMRIRRANEKRLSDVSRVSKKNLELLPCDANVLIVHGDKGWRECGAQIALELFEHNEWKLAVKLSGTTRFSYKAHQFLQPGSTNRYTHAMMWKGGKDWILEFPDRSQWALFKEMHEECYNRNIRAASVKNIPIPGVCLIEEFDDNVTEVAFVRSSSKYFRQVETDVEMALDPSRVLYDMDSDDEQWLLKIRSSSEADDCGLSEISEEIFEKIIDIFEKAAYSQQRDQFTSNEIEELMAGVGSMEAIKVIYEHWRQKRLKKGMPLIRHLQVTSELIACLICHEFIACGSVVTSFSPLYDMIYLRFHVMSLVLLE
*****************RSLDLKSLYKSGTSMES******RKI****************SKTVSISRL********SV*******V***SVDLKDLKCHNSCSGFNGISFSLDNSGVRIPKRKRGFVGRKKVEVDQVLKLPEHSCSKASIIDQAAK***********************************************************GECAI*********************************************************************************************************************************************************************************************************************************************************HYYEIFSGDLDGFWVLKRRIKVFWPLDQCWYYGLVDDYDKGKKLHHVKYDDRDEEWINLENERFKLLLLPS*****************************************************************************************************************************************SGLPIVYYRRRFR**************************************************************GLTIPLIDPKQARFKFSFPVLSILNYAFEAENLWLVHEVFLLHYGKLITMWPSVQLEMLFVDNVVGLRYFLFEDCLKQAVGYVFLVLSLFHQPNVLGKSSDRQLPVTSIRFKFSCFQNLSKQFVFAFYNFAEVKNSTWMYMDSKLKRHCLLTRQLPLSECTNDNIKVLQNGG****T**VCW******GLQRISKQRTYLMGVPKQSARVKVGWCSSNLDKQRNLPPFVLSFTAAPSFFISLHLKLLMEHSGAGMSLHGQESTECAGSGCLIADESTYENNVPQCTLELNMSKSLDYNMMVMSKDAASHECSPAATSKLEAVSSSVCGDESWTRSPQICRNSSTNVAGTSASSQEPEQIGNEAIVPLQKLQYHDPKSEQCVLLPR**SGDCDKTD*AYNSPLNSIRVEIPTFDQFEKH*REYHSVQCTTDLNWNMNGGIVPSLNPTAPRST****************WSVEKADVAHSSFGSAPKKPRTQVSYSLPFGG************************************NLELLPCDANVLIVHGDKGWRECGAQIALELFEHNEWKLAVKLSGTTRFSYKAHQFLQPGSTNRYTHAMMWKGGKDWILEFPDRSQWALFKEMHEECYNRNIRAASVKNIPIPGVCLIEEFDDNVTEVAFVRSSSKYFRQVETDVEMALDPSRVLYDMDSDDEQWLLKIRSSSEADDCGLSEISEEIFEKIIDIFEKAAYSQQRDQFTSNEIEELMAGVGSMEAIKVIYEHWRQKRLKKGMPLIRHLQVTSELIACLICHEFIACGSVVTSFSPLYDMIYLRFHVMSLVLLE
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MENRVGNSDGTAIPKKARSLDLKSLYKSGTSMESQHKDVKRKISKEDGDDEKSNKRKKSSKTVSISRLKNVDNSKRSVDGVYNGVVSSGSVDLKDLKCHNSCSGFNGISFSLDNSGVRIPKRKRGFVGRKKVEVDQVLKLPEHSCSKASIIDQAAKVTGDDSGTRDNSSRDSDPRVESSKDLGELFEPSKFKRKDSDDFKENWNGELHSARHLQEGECAIRSVVNHGESSLKKEKRRSKSNSNRHLKEGGHACYSVLNNGQSLLKKPNGVTNSNSGQCLKEENEGASHSVLNNSNSSLKESRRNNSKRKDSARHKKSVAKEAEHVINASGNVSNIKDSDHDRSVGKEAEPLVDASAKVSKRKDFSQDKISVAKEADILIDTSGKACDNLLEDEENLEENAAMMLSSRFDPSCTGFSSNGKSIVSPNGLSFLLSSGQGPGSHDSSLLDAAGRALRPRTHHREKGHSRKRRHYYEIFSGDLDGFWVLKRRIKVFWPLDQCWYYGLVDDYDKGKKLHHVKYDDRDEEWINLENERFKLLLLPSEVPGKAARRRSRKRVNSVDEGxxxxxxxxxxxxxxxxxxxxxCMGSYMESEPIISWLARSTHRVKSSPTPAMKKQKISDLYPTSGPPFLANKVGNAHGLDADSKTSKFSSNSKLPDRFTDGGRGEESTSENPTCSKDSGLPIVYYRRRFRKTGSSLCSTSSGNNISSSTPASVTLLSSSIGEFWDFEEHDTFCKREVSNGASWSTTTGSGRVGLTIPLIDPKQARFKFSFPVLSILNYAFEAENLWLVHEVFLLHYGKLITMWPSVQLEMLFVDNVVGLRYFLFEDCLKQAVGYVFLVLSLFHQPNVLGKSSDRQLPVTSIRFKFSCFQNLSKQFVFAFYNFAEVKNSTWMYMDSKLKRHCLLTRQLPLSECTNDNIKVLQNGGNLLSTAAVCWDDSSTKGLQRISKQRTYLMGVPKQSARVKVGWCSSNLDKQRNLPPFVLSFTAAPSFFISLHLKLLMEHSGAGMSLHGQESTECAGSGCLIADESTYENNVPQCTLELNMSKSLDYNMMVMSKDAASHECSPAATSKLEAVSSSVCGDESWTRSPQICRNSSTNVAGTSASSQEPEQIGNEAIVPLQKLQYHDPKSEQCVLLPRPSSGDCDKTDTAYNSPLNSIRVEIPTFDQFEKHDREYHSVQCTTDLNWNMNGGIVPSLNPTAPRSTGHRNRSSSSFGYLAHGWSVEKADVAHSSFGSAPKKPRTQVSYSLPFGGYYSPKNRVNHQKGLPHMRIRRANEKRLSDVSRVSKKNLELLPCDANVLIVHGDKGWRECGAQIALELFEHNEWKLAVKLSGTTRFSYKAHQFLQPGSTNRYTHAMMWKGGKDWILEFPDRSQWALFKEMHEECYNRNIRAASVKNIPIPGVCLIEEFDDNVTEVAFVRSSSKYFRQVETDVEMALDPSRVLYDMDSDDEQWLLKIRSSSEADDCGLSEISEEIFEKIIDIFEKAAYSQQRDQFTSNEIEELMAGVGSMEAIKVIYEHWRQKRLKKGMPLIRHLQVTSELIACLICHEFIACGSVVTSFSPLYDMIYLRFHVMSLVLLE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1579 2.2.26 [Sep-21-2011]
O04716 1324 DNA mismatch repair prote no no 0.031 0.037 0.448 7e-06
P0CB221083 Histone-lysine N-methyltr no no 0.031 0.046 0.46 0.0003
>sp|O04716|MSH6_ARATH DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana GN=MSH6 PE=1 SV=2 Back     alignment and function desciption
 Score = 54.3 bits (129), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 36/49 (73%)

Query: 484 VLKRRIKVFWPLDQCWYYGLVDDYDKGKKLHHVKYDDRDEEWINLENER 532
           V+ ++++V+WPLD+ WY G V  YDKG+  H V+Y+D +EE ++L  E+
Sbjct: 124 VVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEK 172
Involved in post-replicative DNA-mismatch repair.
Arabidopsis thaliana (taxid: 3702)
>sp|P0CB22|ATX2_ARATH Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis thaliana GN=ATX2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1579
255551112 1705 hypothetical protein RCOM_0804080 [Ricin 0.877 0.812 0.523 0.0
224092384 1686 hypothetical protein POPTRDRAFT_561815 [ 0.848 0.794 0.474 0.0
2254301071679 PREDICTED: uncharacterized protein LOC10 0.723 0.680 0.536 0.0
2960819351634 unnamed protein product [Vitis vinifera] 0.709 0.685 0.530 0.0
4495035641466 PREDICTED: LOW QUALITY PROTEIN: uncharac 0.654 0.704 0.514 0.0
3565619491586 PREDICTED: uncharacterized protein LOC10 0.733 0.730 0.467 0.0
3565543561603 PREDICTED: uncharacterized protein LOC10 0.744 0.733 0.480 0.0
3565543541564 PREDICTED: uncharacterized protein LOC10 0.709 0.716 0.478 0.0
4494373721476 PREDICTED: uncharacterized protein LOC10 0.656 0.702 0.490 0.0
3565619531578 PREDICTED: uncharacterized protein LOC10 0.724 0.724 0.471 0.0
>gi|255551112|ref|XP_002516604.1| hypothetical protein RCOM_0804080 [Ricinus communis] gi|223544424|gb|EEF45945.1| hypothetical protein RCOM_0804080 [Ricinus communis] Back     alignment and taxonomy information
 Score = 1405 bits (3637), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 826/1578 (52%), Positives = 1003/1578 (63%), Gaps = 193/1578 (12%)

Query: 1    MENRVGNSDGTAIPKKARSLDLKSLYKSGT-SMESQHKDVKRKISKEDGDDEKSNKRKKS 59
            MENR+GNS    IPKK+RSLDL+SLY+S   S E+Q K++KRK    D D+    KRKKS
Sbjct: 1    MENRIGNSHEAEIPKKSRSLDLRSLYQSSEGSKEAQIKNLKRK-GGSDVDNSGFEKRKKS 59

Query: 60   SKTVSISRLKNVD-NSKRSVDGVYNGVVSSGSVDLKDLK--------CHNSCSGFNGISF 110
             K VSIS  + V+ N  +S++ VYNG +SSGS D K++K         +NS SG + IS 
Sbjct: 60   RKAVSISSFRKVNGNGSKSLEEVYNGSLSSGSHDTKEIKSGSLNQQRVNNSNSGVSKISQ 119

Query: 111  SLDNSGVRIPKRKRGFVGRKKVEVD-QVLKLPEHSCSKASIIDQAAKVTGDDSGTRDNSS 169
            +L+ S  +IP+RKRGFVGRKKVE D QVLK  E S  K    DQ +K+T           
Sbjct: 120  NLEGSFDKIPRRKRGFVGRKKVEKDSQVLKPAEESRDKLET-DQISKLT----------- 167

Query: 170  RDSDPRVESSKDLGELFEPSKFKRKD-SDDFKENWNGELHSARHLQEGECAIRSVVNHGE 228
                      KD G++ E SK K+K  SDDFKEN                          
Sbjct: 168  ---------VKDTGKVVESSKVKQKKVSDDFKEN-------------------------- 192

Query: 229  SSLKKEKRRSKSNSNRHLKEGGHACYSVLNNG-QSLLKKPNGVTNSNSGQCLKEENEGAS 287
                   R S+ +S RH +E GH  +SV  +   SL K   G                  
Sbjct: 193  -------RISERSSGRHCEEDGHTGHSVARSVVLSLWKSQTG------------------ 227

Query: 288  HSVLNNSNSSLKESRRNNSKRKDSARHKKSVAKEAEHVINASGNVSNIKDSDHDRSVGKE 347
            HSV  + +SS K+S R  S      R +K++  E                   D+SV KE
Sbjct: 228  HSVEIDDDSSKKKSLRKRS------RKRKNLISE-------------------DKSVAKE 262

Query: 348  AEPLVDASAKVSKRKDFSQDKISVAKEADILIDTSGKACDNLLEDEENLEENAAMMLSSR 407
            AEP VD  A+VS                          CD   +DEENLEENAA MLSSR
Sbjct: 263  AEPSVD--AEVS--------------------------CDLHDDDEENLEENAARMLSSR 294

Query: 408  FDPSCTGFSSNGKS--IVSPNGLSFLLSSGQGPGSH--------DSSLLDAAGRALRPRT 457
            FD SCTGFSSN K+  + S NGLSFLLSSGQ   +H        +S+ LDAA R LRPR 
Sbjct: 295  FDTSCTGFSSNSKASPVPSTNGLSFLLSSGQEFATHGPNYISGSESASLDAAARILRPRK 354

Query: 458  HHREKGHSRKRRHYYEIFSGDLDGFWVLKRRIKVFWPLDQCWYYGLVDDYDKGKKLHHVK 517
             H+EKG SRKRRHYYEIFSGDLD +WVL RRIKVFWPLDQ WYYGLV+DYD  +KLHHVK
Sbjct: 355  QHKEKGSSRKRRHYYEIFSGDLDAYWVLNRRIKVFWPLDQSWYYGLVNDYDNVRKLHHVK 414

Query: 518  YDDRDEEWINLENERFKLLLLPSEVPGKAARRRSRKRVNSVDEGKLSLKSSKEKEKRNLN 577
            YDDRDEEWINL++ERFKLLLLPSEVPGK  R+RSR +      GK  LK SKEK  R+  
Sbjct: 415  YDDRDEEWINLQDERFKLLLLPSEVPGKPQRKRSRTKEKISKGGKGKLKPSKEK--RDST 472

Query: 578  TEEENCMGSYMESEPIISWLARSTHRVKSSPTPAMKKQKISDLYPTSGPPFLA------N 631
             E+++ +G+YM+SEPIISWLARSTHRVKSSP  A+KKQK+S +  TS P  L       N
Sbjct: 473  IEDDSYVGNYMDSEPIISWLARSTHRVKSSPLRALKKQKVSGISLTSAPSLLPEEAVCRN 532

Query: 632  KVGNAHGLDADSKTSKFSSNSKLPDRFTDGGRGEESTSENPTCS-KDSGLPIVYYRRRFR 690
            +      L  D   S  S NS LP RFT GGR      E P  S KD+ LP+VYYRRRFR
Sbjct: 533  ECSEGDLLSRD--KSNLSGNSALPGRFTAGGR-----DEVPDISPKDNKLPVVYYRRRFR 585

Query: 691  KTGSSLCSTSSGNNISSSTPASVTLLSSSIGEFWDFEEHDTFCKR--------EVSNGAS 742
               S     S  N++S   P S T L  ++     FE+ D    R         +    +
Sbjct: 586  CANSMPRHASEDNHVSIGVPESDTSLVPAVYVSRAFEKQDISLARVDPDSDLGRLDTAEA 645

Query: 743  WSTTTGSGRVGLTIPLIDPKQARFKFSFPVLSILNYAFEAENLWLVHEVFLLHYGKLITM 802
               +   G + L   L++P+Q RF    PVLS+ N++F + + W  + + LL +G+L+T 
Sbjct: 646  LWLSDVRGLLRLNTELVEPRQFRFGLRIPVLSVHNFSFISGHTWFCNALLLLQHGRLMTT 705

Query: 803  WPSVQLEMLFVDNVVGLRYFLFEDCLKQAVGYVFLVLSLFHQPNVLGKSSDRQLPVTSIR 862
            WP V LEMLFVDN+VGLR+ LFE CLKQA+ +V  VL++FHQP   GK  D QLPVTSI+
Sbjct: 706  WPRVHLEMLFVDNIVGLRFLLFEGCLKQAIAFVLQVLTVFHQPTEHGKFVDLQLPVTSIK 765

Query: 863  FKFSCFQNLSKQFVFAFYNFAEVKNSTWMYMDSKLKRHCLLTRQLPLSECTNDNIKVLQN 922
            FKFSC Q+  KQ VFAFYNF+E+KNS WM++DS+LKRHCLLT+QLPLSECT DN+K LQN
Sbjct: 766  FKFSCIQDFRKQLVFAFYNFSELKNSKWMHLDSRLKRHCLLTKQLPLSECTYDNVKALQN 825

Query: 923  GGNLLSTAAVCWDDSSTKGLQRISKQRTYLMGVPKQSARVKVGWCSSNLDKQRN-LPPFV 981
            G + L  ++VC D +  KG  +  +Q   LMGV + S  V     SS  DK     PPF 
Sbjct: 826  GTSQLLDSSVCRDSARIKGPVKRFRQCVSLMGVSRDSNYVNSPSSSSRFDKSHGWFPPFA 885

Query: 982  LSFTAAPSFFISLHLKLLMEHSGAGMSLHGQESTECA-GSGCLIADESTYENNVPQCTLE 1040
            LSFTAAP+FF+SLHLKLLMEHS   +S    +S E    SG L AD+    ++    +L 
Sbjct: 886  LSFTAAPTFFLSLHLKLLMEHSVTHISFQDHDSVEHPENSGSLQADDCYSVDD----SLN 941

Query: 1041 LNMSKSLDYNMMVMSKDAASHECSPAATSKLEAVSSSVCGDESWTRSPQICRNSSTNVAG 1100
             +   + D N    S+D    EC   A ++  AV  SV     W +     +NS  + A 
Sbjct: 942  KHAETTPDNNSKGSSRDVDCEECLFCANTEPLAVGVSVNTVGDWMKPSPKHQNSDVH-AE 1000

Query: 1101 TSASSQEPEQIGNEAIVPLQKLQYHDPKSEQCVLLPRPSSGDCDKTDTAYNSPLNSIRVE 1160
            TSA S++  ++G + I  LQK + H  ++EQ   LP+PS       D A    LN IRVE
Sbjct: 1001 TSAFSKDSGELGRD-IASLQKWRCHHSEAEQNDALPKPS------VDRAL---LNGIRVE 1050

Query: 1161 IPTFDQFEKH-DREYHSVQCTTDLNWNMNGGIVPSLNPTAPRSTGHRNRSS-SSFGYLAH 1218
            IP+ +QF+K  D++    Q +TDL+WNMNGGI+PS NPTA RST HRNRS+ +S GY AH
Sbjct: 1051 IPSSNQFDKQVDKDLDGAQQSTDLSWNMNGGIIPSPNPTARRSTWHRNRSNLASVGYNAH 1110

Query: 1219 GWSVEKADVAHSSFGSAPKKPRTQVSYSLPFGGY-YSPKNRVNHQKGLPHMRIRRANEKR 1277
            GWS  + D   ++F + PKKPRTQVSY+LPFG + YS K++ + QKG+PH RIR ANEKR
Sbjct: 1111 GWSDGRGDFLQNNFRNGPKKPRTQVSYALPFGAFDYSSKSKGHSQKGIPHKRIRTANEKR 1170

Query: 1278 LSDVSRVSKKNLELLPCDANVLIVHGDKGWRECGAQIALELFEHNEWKLAVKLSGTTRFS 1337
             SDVSR S++NLELL C+ANVLI  GDKGWRE GAQ+ LEL +HNEWKLAVKLSGTT++S
Sbjct: 1171 SSDVSRGSERNLELLSCEANVLITLGDKGWREYGAQVVLELSDHNEWKLAVKLSGTTKYS 1230

Query: 1338 YKAHQFLQPGSTNRYTHAMMWKGGKDWILEFPDRSQWALFKEMHEECYNRNIRAASVKNI 1397
            YKAHQFLQPGSTNRYTHAMMWKGGKDWILEF DRSQWALFKEMHEECYNRNI AASVKNI
Sbjct: 1231 YKAHQFLQPGSTNRYTHAMMWKGGKDWILEFSDRSQWALFKEMHEECYNRNIHAASVKNI 1290

Query: 1398 PIPGVCLIEEFDDNVTEVAFVRSSSKYFRQVETDVEMALDPSRVLYDMDSDDEQWLLKIR 1457
            PIPGV LIEE DDN  EV F+R SSKYFRQVETDVEMAL+PSR+LYD+DSDDEQW+    
Sbjct: 1291 PIPGVRLIEEHDDNGIEVPFIRHSSKYFRQVETDVEMALNPSRLLYDIDSDDEQWISNNL 1350

Query: 1458 SSSEADDCGLSEISEEIFEKIIDIFEKAAYSQQRDQFTSNEIEELMAGVGSMEAIKVIYE 1517
            SS E  +    EISEEIFEK +D+FEKAAYSQ RDQFTS+EIEELMAGVGSMEAIKVI++
Sbjct: 1351 SSLEVFNSNSWEISEEIFEKTMDLFEKAAYSQHRDQFTSDEIEELMAGVGSMEAIKVIHD 1410

Query: 1518 HWRQKRLKKGMPLIRHLQ 1535
            +W+QKR +KGMPLIRHLQ
Sbjct: 1411 YWQQKRQRKGMPLIRHLQ 1428

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224092384|ref|XP_002309585.1| hypothetical protein POPTRDRAFT_561815 [Populus trichocarpa] gi|222855561|gb|EEE93108.1| hypothetical protein POPTRDRAFT_561815 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225430107|ref|XP_002281922.1| PREDICTED: uncharacterized protein LOC100264575 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296081935|emb|CBI20940.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449503564|ref|XP_004162065.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228859 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356561949|ref|XP_003549238.1| PREDICTED: uncharacterized protein LOC100789801 [Glycine max] Back     alignment and taxonomy information
>gi|356554356|ref|XP_003545513.1| PREDICTED: uncharacterized protein LOC100781778 [Glycine max] Back     alignment and taxonomy information
>gi|356554354|ref|XP_003545512.1| PREDICTED: uncharacterized protein LOC100781230 [Glycine max] Back     alignment and taxonomy information
>gi|449437372|ref|XP_004136466.1| PREDICTED: uncharacterized protein LOC101216141 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356561953|ref|XP_003549240.1| PREDICTED: uncharacterized protein LOC100792436 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1579
TAIR|locus:2125682 1540 AT4G32620 [Arabidopsis thalian 0.240 0.246 0.562 2.3e-221
TAIR|locus:2180218766 AT5G04670 "AT5G04670" [Arabido 0.157 0.325 0.350 2.3e-32
TAIR|locus:2116787873 AT4G31880 [Arabidopsis thalian 0.063 0.115 0.311 6.9e-07
TAIR|locus:2025712774 AT1G80810 [Arabidopsis thalian 0.045 0.093 0.402 3.2e-06
TAIR|locus:2183750395 AT5G10950 "AT5G10950" [Arabido 0.031 0.124 0.469 7e-05
TAIR|locus:2200557990 AT1G15940 [Arabidopsis thalian 0.061 0.097 0.355 0.00062
TAIR|locus:2125682 AT4G32620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1081 (385.6 bits), Expect = 2.3e-221, Sum P(4) = 2.3e-221
 Identities = 220/391 (56%), Positives = 280/391 (71%)

Query:  1145 KTDTAYNSPLNSIRVEIPTFDQFEKHDREYHSVQCTTDLNWNMNGGIVPSLNPTAPRSTG 1204
             K +T  N  +N I +++P  D     D E  + Q +++L  N+ G    S   TAPRS  
Sbjct:   902 KHETRSNVSVNGISIQVPISD-----DCEDGTPQ-SSNLALNIQGSSNSSPKATAPRSMW 955

Query:  1205 HRNRSSSSFGYLAHGWSVEKADVAHSSFGSAPKKPRTQVSYSLPFGGYYSPKNRVNHQKG 1264
             +R++SS + G+L+HGWS  K D  +++  + PKK RTQVSYSLP GG  S +N+ +  KG
Sbjct:   956 NRSKSSLN-GHLSHGWSDSKGDFLNTNLANGPKKRRTQVSYSLPSGGSDS-RNKGSLLKG 1013

Query:  1265 LPHMRIRRANEKRLSDVSRVSKKNLELLPCDANVLIVHGDKGWRECGAQIALELFEHNEW 1324
             +P+ RIRR+     +DV++  +K+LE   CDANVL+  GD+GWRE GAQI LE F++NEW
Sbjct:  1014 MPNKRIRRST----ADVTKGIQKDLESSLCDANVLVTLGDRGWREYGAQIFLEPFDNNEW 1069

Query:  1325 KLAVKLSGTTRFSYKAHQFLQPGSTNRYTHAMMWKGGKDWILEFPDRSQWALFKEMHEEC 1384
             +LAVK+SGTT++S++AHQFLQPGS NR+THAMMWKGGKDW LEFPDR QW LFKEMHEEC
Sbjct:  1070 RLAVKISGTTKYSHRAHQFLQPGSVNRFTHAMMWKGGKDWTLEFPDRGQWFLFKEMHEEC 1129

Query:  1385 YNRNIRAASVKNIPIPGVCLIEEFDDNVTEVAFVRSSSKYFRQVETDVEMALDPSRVLYD 1444
             YNRN RAA V+NIPIPG+ +IE  + + TE  F+RSSSKYFRQ ETDVEMALDPSRV+YD
Sbjct:  1130 YNRNTRAALVRNIPIPGIRMIERDNFDGTETEFIRSSSKYFRQTETDVEMALDPSRVMYD 1189

Query:  1445 MDSDDEQWLLKIRSSSEADDCGLXXXXXXXXXXXXXXXXXAAYSQQRDQFTSNEIEELMA 1504
             MDSDDEQ LL+IR  S A++ G                  A++ +QRD FT  EI+EL A
Sbjct:  1190 MDSDDEQCLLRIRECSSAENSGSCEITEDMFEKAMDMFEKASFVKQRDNFTLIEIQELTA 1249

Query:  1505 GVGSMEAIKVIYEHWRQKRLKKGMPLIRHLQ 1535
             GVGS+EA++ IYE WR KR +KGMPLIRHLQ
Sbjct:  1250 GVGSLEAMETIYELWRTKRQRKGMPLIRHLQ 1280
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0009616 "virus induced gene silencing" evidence=RCA
GO:0010050 "vegetative phase change" evidence=RCA
GO:0010267 "production of ta-siRNAs involved in RNA interference" evidence=RCA
GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=RCA
TAIR|locus:2180218 AT5G04670 "AT5G04670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116787 AT4G31880 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2025712 AT1G80810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183750 AT5G10950 "AT5G10950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200557 AT1G15940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1579
pfam10513145 pfam10513, EPL1, Enhancer of polycomb-like 3e-22
>gnl|CDD|220792 pfam10513, EPL1, Enhancer of polycomb-like Back     alignment and domain information 
 Score = 94.0 bits (234), Expect = 3e-22
 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 15/150 (10%)

Query: 1345 QPGSTNRYTHAMMWKGGKDWILEF-PDRSQWALFKEMH-EECYNRNIRAASVKN------ 1396
            +P   +      +++      LE   D     +   +  EE + ++++            
Sbjct: 2    RPRRLSIKKPLPVFREEDLPDLEKSADIEVPQIPTGVEKEEEWEKHLQVPISAAQVAKKL 61

Query: 1397 -IPIPGVCLIEEFDDNVTEVAFVRSSSKYFRQVETDVEMALDPSRVLYDMDSDDEQWLLK 1455
             IP P    IE++D       F R  S Y R  E  VE  LD S V YDMD +DE WL +
Sbjct: 62   YIPTPEAREIEDYDK-PYAPKFKRPKS-YIRFSEKSVEE-LD-SGVEYDMDEEDEAWLEE 117

Query: 1456 IRSSSEADDCGLSEISEEIFEKIIDIFEKA 1485
            +    +  + GL+ +SE+ FEK++D  EK 
Sbjct: 118  LNE--KRKEEGLAPLSEDDFEKLMDRLEKE 145

This is a family of EPL1 (Enhancer of polycomb-like) proteins. The EPL1 protein is a member of a histone acetyltransferase complex which is involved in transcriptional activation of selected genes. Length = 145

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1579
PF10513160 EPL1: Enhancer of polycomb-like; InterPro: IPR0195 99.78
PF0946555 LBR_tudor: Lamin-B receptor of TUDOR domain; Inter 98.93
KOG0955 1051 consensus PHD finger protein BR140/LIN-49 [General 98.74
KOG2261 716 consensus Polycomb enhancer protein, EPC [Transcri 98.55
KOG0954 893 consensus PHD finger protein [General function pre 97.31
smart0033357 TUDOR Tudor domain. Domain of unknown function pre 97.29
KOG2261716 consensus Polycomb enhancer protein, EPC [Transcri 97.1
cd0450848 TUDOR Tudor domains are found in many eukaryotic o 97.04
smart0074361 Agenet Tudor-like domain present in plant sequence 97.01
COG5141 669 PHD zinc finger-containing protein [General functi 96.69
PF09038122 53-BP1_Tudor: Tumour suppressor p53-binding protei 94.03
KOG4675273 consensus Uncharacterized conserved protein, conta 93.58
PF06003264 SMN: Survival motor neuron protein (SMN); InterPro 92.41
>PF10513 EPL1: Enhancer of polycomb-like; InterPro: IPR019542 This domain is found at the N-terminal of EPL1 (Enhancer of polycomb-like) proteins Back     alignment and domain information 
Probab=99.78  E-value=1.8e-19  Score=180.85  Aligned_cols=151  Identities=28%  Similarity=0.412  Sum_probs=99.4

Q ss_pred             eEEEE--EcCcccccccchhccccCCCccccc--ccccccCCCcccccCCCchhhhhh--HhhHHHhhccccCCcCCCCc
Q 000393         1324 WKLAV--KLSGTTRFSYKAHQFLQPGSTNRYT--HAMMWKGGKDWILEFPDRSQWALF--KEMHEECYNRNIRAASVKNI 1397 (1579)
Q Consensus      1324 wRIsI--KLdgiTrds~kAqqimepcnSNKeN--ha~~w~g~k~WkLEFpDksqw~lF--KEmheEC~eRNsrAsSvKeI 1397 (1579)
                      .+|.|  +|.++...+.......+ +++|+.+  +.++-...+.-.+   .++.|..-  +-+...--..+........|
T Consensus         4 ~~ld~~~~l~I~~~~d~~~~~~~~-~~~~~~~~~~~~~~gv~~~~~~---~~~e~e~~~q~~~~~~~~~~~~~~~~~~~I   79 (160)
T PF10513_consen    4 RRLDIKKPLPIFREEDLDDLDESE-DSSNKNQAVPQSPTGVEKEEKL---SKQEWEKHLQKPISASQNSKSKKKKEKKKI   79 (160)
T ss_pred             CCCCCCCCeeEEechhcccccccc-cccccccccccccCCccchhhc---cccccccccccccchhhhhhcccccccccC
Confidence            45666  88888877777666666 7777664  2222222222111   11111000  00000000000001134679


Q ss_pred             CCCcceeecCCCCCccccCcccCCCccEEeeccchhhccCCCccCCCCChhHHHHHHHHhcCCccCcCCCCCCCHHHHHH
Q 000393         1398 PIPGVCLIEEFDDNVTEVAFVRSSSKYFRQVETDVEMALDPSRVLYDMDSDDEQWLLKIRSSSEADDCGLSEISEEIFEK 1477 (1579)
Q Consensus      1398 PIP~VReVEdYD~~y~~~PFsRpPaSYIRfietdVEeALD~E~VEYDMDSEDEEWLeq~Nkk~krkndGs~qLSEDdFEk 1477 (1579)
                      |+|.++.++ |+..+. .+|.+ |.+||||+...+++ ++. .|+||||+||+.||+.+|++  ++..|..+||++.||.
T Consensus        80 P~P~~~~~~-~~~~~~-~~f~~-p~~yi~~~~~~~e~-~~~-~veYDmDeeD~~wL~~~N~~--r~~~~~~~ls~~~FE~  152 (160)
T PF10513_consen   80 PTPSVRVVD-YEKPYS-PPFKR-PSSYIRFSEKSVED-LDE-GVEYDMDEEDEEWLELLNKK--RKSDGLEPLSEEDFEI  152 (160)
T ss_pred             CCCceEEec-CcCCCC-CcccC-CccccccccCCHHH-hcc-CcCCCCchHHHHHHHHHHHH--hhhcCCCCCCHHHHHH
Confidence            999999888 888887 77999 89999999655665 343 69999999999999999995  4457788999999999


Q ss_pred             HHHHHHhh
Q 000393         1478 IIDIFEKA 1485 (1579)
Q Consensus      1478 MMDRLEKe 1485 (1579)
                      |||+|||+
T Consensus       153 ~md~lEke  160 (160)
T PF10513_consen  153 IMDRLEKE  160 (160)
T ss_pred             HHHHHhCC
Confidence            99999996

The EPL1 protein is a member of a histone acetyltransferase complex which is involved in transcriptional activation of selected genes []. It is also present at the N terminus of Jade family proteins.
>PF09465 LBR_tudor: Lamin-B receptor of TUDOR domain; InterPro: IPR019023 The Lamin-B receptor is a chromatin and lamin binding protein in the inner nuclear membrane Back     alignment and domain information
>KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only] Back     alignment and domain information
>KOG2261 consensus Polycomb enhancer protein, EPC [Transcription] Back     alignment and domain information
>KOG0954 consensus PHD finger protein [General function prediction only] Back     alignment and domain information
>smart00333 TUDOR Tudor domain Back     alignment and domain information
>KOG2261 consensus Polycomb enhancer protein, EPC [Transcription] Back     alignment and domain information
>cd04508 TUDOR Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains Back     alignment and domain information
>smart00743 Agenet Tudor-like domain present in plant sequences Back     alignment and domain information
>COG5141 PHD zinc finger-containing protein [General function prediction only] Back     alignment and domain information
>PF09038 53-BP1_Tudor: Tumour suppressor p53-binding protein-1 Tudor; InterPro: IPR015125 This domain consist of ten beta-strands and a carboxy-terminal alpha-helix Back     alignment and domain information
>KOG4675 consensus Uncharacterized conserved protein, contains ENT domain [General function prediction only] Back     alignment and domain information
>PF06003 SMN: Survival motor neuron protein (SMN); InterPro: IPR010304 This family consists of several eukaryotic survival motor neuron (SMN) proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1579
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 54.1 bits (129), Expect = 4e-07
 Identities = 78/563 (13%), Positives = 146/563 (25%), Gaps = 161/563 (28%)

Query: 37  KDV----KRKISKEDGDD--EKSNKRKKSSKTVSISRLKNVDNSKRSVDGV----YNGVV 86
           KDV    K  +SKE+ D      +    + +       K  +  ++ V+ V    Y  ++
Sbjct: 36  KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLM 95

Query: 87  SSGSVDLKD--------LKCHNSCSGFNGISFSLDNSGVRIPKRKRGFVGRKKVEVDQV- 137
           S    + +         ++  +           L N      K     V R +    ++ 
Sbjct: 96  SPIKTEQRQPSMMTRMYIEQRDR----------LYNDNQVFAKY---NVSRLQ-PYLKLR 141

Query: 138 ---LKLPEHS---------CSKASIIDQAAKVTGDDSGTRDNSSRDSDPRVESSKDLGEL 185
              L+L               K  +                        +V+   D  ++
Sbjct: 142 QALLELRPAKNVLIDGVLGSGKTWVALDVCL----------------SYKVQCKMD-FKI 184

Query: 186 FEPSKFKRKDSDDFKENWNGELHSARHLQEGECAIRSVVNHGESSLKKEKRRSKSNSNRH 245
           F  +       +   E     L+             S +     S++ E RR        
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR-------L 237

Query: 246 LKEGGHA-CYSVLNNGQS--LLKKPNG-----VTNSNSGQCLKEENEGASHSVLNNSNSS 297
           LK   +  C  VL N Q+       N      +T               +H  L++ + +
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297

Query: 298 LKESRRNNSKRKDSARHKKSVAKEAEHVINASGNVSNIKDSDHDRSVGKEAEPLVDA--S 355
           L                      E + ++       + +  D  R V     P   +  +
Sbjct: 298 LTPD-------------------EVKSLL---LKYLDCRPQDLPREV-LTTNPRRLSIIA 334

Query: 356 AKVSKRKDFSQ--DKISVAKEADILIDTSGKACDNLLEDEENLEENAAMMLSSRFDPSCT 413
             +            ++  K   I+     ++  N+LE  E             FD   +
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTII-----ESSLNVLEPAE---------YRKMFD-RLS 379

Query: 414 GFSSNGKSIVSPNGLSFL--LSSGQGPGS-----HDSSLLDAAGRALRPRTHH---REKG 463
            F  +    +    LS +                H  SL++   +             K 
Sbjct: 380 VFPPSAH--IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKV 437

Query: 464 HSRKRR--H-----YYEIFSG-DLDGFWVLKRRIKVFWPLDQCWYYGLVDDYDKGKKLHH 515
                   H     +Y I    D D              LDQ +Y  +          HH
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDLIPP--------YLDQYFYSHIG---------HH 480

Query: 516 VKYDDRDEEWINLENERFKLLLL 538
           +K  +  E         F+++ L
Sbjct: 481 LKNIEHPERM-----TLFRMVFL 498
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1579
d2d9ta160 Tudor domain-containing protein 3, TDRD3 {Mouse (M 96.2
d1mhna_59 Survival motor neuron protein 1, smn {Human (Homo 95.71
d2diga155 Lamin-b receptor {Human (Homo sapiens) [TaxId: 960 95.65
d2diqa197 Tudor and KH domain-containing protein TDRKH {Huma 93.03
d2hqxa190 P100 co-activator, SND1 {Human (Homo sapiens) [Tax 90.65
d1wgsa_133 Probable histone acetyltransferase MYST1 {Mouse (M 85.35
>d2d9ta1 b.34.9.1 (A:8-67) Tudor domain-containing protein 3, TDRD3 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: All beta proteins
fold: SH3-like barrel
superfamily: Tudor/PWWP/MBT
family: Tudor domain
domain: Tudor domain-containing protein 3, TDRD3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.20  E-value=0.0065  Score=34.51  Aligned_cols=47  Identities=19%  Similarity=0.153  Sum_probs=42.2

Q ss_pred             CCCCEEEEECCCCCCEEEEEEEEEECCCCEEEEECCC-CCCEEEECCC
Q ss_conf             3364389972799956878988851899818998458-9801462476
Q 000393          484 VLKRRIKVFWPLDQCWYYGLVDDYDKGKKLHHVKYDD-RDEEWINLEN  530 (1579)
Q Consensus       484 LVGrRIkVfWPlD~~WY~GtVtsYDp~tkkH~V~YDD-GDeE~L~Ls~  530 (1579)
                      -||..+...|+.|+.||.|+|...++..+...|.|.| |..|.+.+..
T Consensus         4 kvG~~c~A~~~~D~~wYRA~I~~i~~~~~~~~V~fvDYGn~e~v~~~~   51 (60)
T d2d9ta1           4 KPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFTDYGNYEEVLLSN   51 (60)
T ss_dssp             CTTCEEEEECTTTCCEEEEEEEEECSSSSEEEEEETTTTEEEEEEGGG
T ss_pred             CCCCEEEEEECCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEECHHH
T ss_conf             769999999987897999999998278999999998799989983899
>d1mhna_ b.34.9.1 (A:) Survival motor neuron protein 1, smn {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2diga1 b.34.9.1 (A:8-62) Lamin-b receptor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2diqa1 b.34.9.1 (A:8-104) Tudor and KH domain-containing protein TDRKH {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hqxa1 b.34.9.1 (A:8-97) P100 co-activator, SND1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wgsa_ b.34.13.3 (A:) Probable histone acetyltransferase MYST1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure