Citrus Sinensis ID: 000440
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1509 | 2.2.26 [Sep-21-2011] | |||||||
| P54697 | 2245 | Myosin-J heavy chain OS=D | yes | no | 0.614 | 0.412 | 0.422 | 0.0 | |
| Q9Y4I1 | 1855 | Unconventional myosin-Va | yes | no | 0.622 | 0.506 | 0.420 | 0.0 | |
| Q9ULV0 | 1848 | Unconventional myosin-Vb | yes | no | 0.614 | 0.502 | 0.406 | 0.0 | |
| Q99104 | 1853 | Unconventional myosin-Va | yes | no | 0.663 | 0.540 | 0.406 | 0.0 | |
| Q9QYF3 | 1828 | Unconventional myosin-Va | yes | no | 0.660 | 0.544 | 0.405 | 0.0 | |
| P70569 | 1846 | Unconventional myosin-Vb | no | no | 0.664 | 0.543 | 0.385 | 0.0 | |
| Q02440 | 1829 | Unconventional myosin-Va | yes | no | 0.664 | 0.548 | 0.403 | 0.0 | |
| P21271 | 1818 | Unconventional myosin-Vb | no | no | 0.659 | 0.547 | 0.384 | 0.0 | |
| Q876G9 | 1568 | Myosin-2 OS=Saccharomyces | N/A | no | 0.677 | 0.652 | 0.377 | 0.0 | |
| P19524 | 1574 | Myosin-2 OS=Saccharomyces | yes | no | 0.678 | 0.650 | 0.370 | 0.0 |
| >sp|P54697|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2 | Back alignment and function desciption |
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Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/1016 (42%), Positives = 608/1016 (59%), Gaps = 89/1016 (8%)
Query: 10 GSHVWVEHPELAWVDGEVFK---ISAEEVHVHTTNGQTVITNISKVFPKDTEAPPGGVDD 66
G+ VW+ EL W+ +V + SA++V V T + + V +SKVF K+ + G VDD
Sbjct: 27 GAGVWIPDQELGWIGADVIEHSETSADQVLVRTEDDREVKIPLSKVFQKNPDILEG-VDD 85
Query: 67 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 126
++ LS+LHEP +LHNL RY LN+IYTY G ILIAINP+ LP LY M+ Y G Q G
Sbjct: 86 LSFLSHLHEPAILHNLHHRYNLNQIYTYIGKILIAINPYTSLP-LYGKEMISAYYGKQLG 144
Query: 127 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG-------R 179
L+PHV+A+A+ A++ M +G S SILVSGESGAGKTETTK L++Y A +G
Sbjct: 145 TLAPHVYAVAEDAFKDMRYDGTSQSILVSGESGAGKTETTKFLLQYFAAMGNMIKESTSS 204
Query: 180 SGVEG-----------------------RTVEQQVLESNPVLEAFGNAKTVRNNNSSRFG 216
S + G ++VE++VLES P+LEAFGNAKT+RN+NSSRFG
Sbjct: 205 SSINGINTSSDGIPVTPPPSPMKKSPVDKSVEERVLESTPLLEAFGNAKTLRNDNSSRFG 264
Query: 217 KFVELQFDKNGRISGAAVRTYLLERSRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGD 275
KF+E+ F++ G I GA + TYLLE+SR+ + ERNYH FY LL A E++EK L
Sbjct: 265 KFIEIHFNEMGSIIGAKILTYLLEKSRIVRQVYNERNYHIFYQLLSGASEELKEKLNLKT 324
Query: 276 PKSFHYLNQSNCYALDGVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFA 335
+ + YLN+S C+ ++GV D E + T AM + GI+ EQ+ +FR+++AIL +GN EF
Sbjct: 325 IEEYSYLNKSGCFEIEGVSDEEHFNKTCHAMQVAGITLVEQENVFRILSAILLIGNFEFE 384
Query: 336 K--GEEADSSVIKDEKSRFHLNTTAELLKC-DAKSLEDALINRVMVTPEEVITRTLDPVA 392
G DS + D R L + LL C L ++++ R +VT +E
Sbjct: 385 NIAGSNDDSCQLID---RDPLEKVSVLLGCAQPDELLNSMLTRKVVTGKESYISHNTKER 441
Query: 393 AVGSRDALAKTVYSRLFDWLVDKINS--SIGQDPNSRTIIGVLDIYGFESFKLNSFEQFC 450
A +RD+L+ +Y +FDWLV KINS SI S++ IGVLDIYGFESF++N FEQFC
Sbjct: 442 AENARDSLSMFLYGMMFDWLVVKINSSMSISTQQKSKSFIGVLDIYGFESFEVNGFEQFC 501
Query: 451 INFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEA 510
IN+ NEKLQQ FNQHVFK EQ+EY KE+I+WSYI+F DNQD LDLIEKKP I+ LLDE
Sbjct: 502 INYANEKLQQLFNQHVFKEEQQEYIKEKIDWSYIDFNDNQDTLDLIEKKPICILTLLDEE 561
Query: 511 CMFPKSTHETFAQKLYQTFKSNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVV 570
MFPK+T +T A KLY S+ +F KP+ S T+FTI+HYAG+VTY D FLDKNKD+++
Sbjct: 562 TMFPKATPQTLATKLYSKMTSHSKFEKPRFSSTAFTINHYAGKVTYETDQFLDKNKDFII 621
Query: 571 AEHQVLLTASKCPFVSGL------FPPLP-----------------EESSKSSKFSSIGS 607
E +L S F+ L F P S S KF S+GS
Sbjct: 622 PEQISILQRSNFSFIKVLMSHSDKFTQSPGGHPQGNGGPTSSNTKGTSGSSSMKFLSVGS 681
Query: 608 RFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGY 667
+F L +LM+T+++T PHY+RC+KPN P F ++I QLRCGGV+E++RI CAG+
Sbjct: 682 QFSTSLATLMKTISTTTPHYVRCIKPNPEKLPQTFNKQDVIHQLRCGGVMESVRICCAGF 741
Query: 668 PTRRTFYEFLHRFGVLAPDVLDGNY---------------DDKVACEKILDKMGLKG--Y 710
PTRR EF R+ +L V D N D K+ + +L + L Y
Sbjct: 742 PTRRLLSEFYQRYKILY--VKDINTGSGGGKKGSNNNKIKDPKILVQNLLTGIELSDDKY 799
Query: 711 QIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWR 770
+IG TKVFLRAGQ+A L+ R E L +A +IQ++ + Y+ RK + LR A++++Q+ R
Sbjct: 800 KIGLTKVFLRAGQLASLEDMRLEQLDRSATVIQKRWKGYLYRKRYKQLRDASLIIQTKLR 859
Query: 771 GILACKLYEQLRREAAALKIQKNFHSYTARTSYLTARSSAIQLQTGLRAMVARNEFRFRK 830
+ A + L+R +A+ IQK + ++ R Y R +++QLQT +R + + +
Sbjct: 860 SVHAKQQLSALQRTHSAILIQKVWRAHRDRVQYQKIRDASLQLQTVMRRHLFSEQVHRER 919
Query: 831 QTKAAIIIEAYLRRHTACSYYKSLKKAAVITQCGWRRRVARRELRNLKMAARETGALKEA 890
AAII++ +R+ + + ++ Q WR ++A+R L+ AR ++E
Sbjct: 920 CENAAIILQTKIRQILSKREVDKKLRGIILIQARWRMKLAKRVYIQLRAEARSLRTVQEQ 979
Query: 891 KDKLEKRVEELTWRLQFEKQLRTNLEEEKAQE---IAKLQDALQAMQLQVEEANFR 943
K+KL++++EEL WRL E + + LE++K + I++L ++LQ+ E +
Sbjct: 980 KNKLQEKLEELQWRLTSEAKRKQQLEDQKVKSDTTISELSSNNDHLELQLSEIQLK 1035
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Processive motor protein that can move over long distances along F-actin without disassociating; processiveness depends on high physiological Mg(2+) concentrations. Presents a high actin affinity in the presence of ADP, fast ATP hydrolysis, and a high steady-state ATPase activity in the presence of actin that is rate limited by ADP release. Physiological decrease of free Mg(2+) ions leads to an increased rate of ADP release and shortening of the fraction of time it spends in the strong acting binding states. Dictyostelium discoideum (taxid: 44689) |
| >sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3 | Back alignment and function description |
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| >sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1 | Back alignment and function description |
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| >sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1 | Back alignment and function description |
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| >sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1 | Back alignment and function description |
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| >sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2 | Back alignment and function description |
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| >sp|Q876G9|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2 | Back alignment and function description |
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| >sp|P19524|MYO2_YEAST Myosin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MYO2 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1509 | ||||||
| 255546055 | 1534 | myosin XI, putative [Ricinus communis] g | 0.999 | 0.983 | 0.882 | 0.0 | |
| 224091182 | 1539 | predicted protein [Populus trichocarpa] | 0.996 | 0.977 | 0.878 | 0.0 | |
| 297738619 | 1547 | unnamed protein product [Vitis vinifera] | 0.999 | 0.974 | 0.867 | 0.0 | |
| 359484294 | 1637 | PREDICTED: myosin-Vb-like [Vitis vinifer | 0.999 | 0.921 | 0.867 | 0.0 | |
| 297743058 | 1610 | unnamed protein product [Vitis vinifera] | 1.0 | 0.937 | 0.850 | 0.0 | |
| 359482502 | 1540 | PREDICTED: myosin-H heavy chain-like [Vi | 1.0 | 0.979 | 0.850 | 0.0 | |
| 56201391 | 1529 | myosin XI [Nicotiana tabacum] | 0.998 | 0.984 | 0.851 | 0.0 | |
| 116047947 | 1529 | myosin XI-K [Nicotiana benthamiana] | 0.998 | 0.984 | 0.851 | 0.0 | |
| 356564776 | 1561 | PREDICTED: myosin-Vb-like [Glycine max] | 1.0 | 0.966 | 0.860 | 0.0 | |
| 356545743 | 1554 | PREDICTED: myosin-Vb-like [Glycine max] | 0.997 | 0.968 | 0.859 | 0.0 |
| >gi|255546055|ref|XP_002514087.1| myosin XI, putative [Ricinus communis] gi|223546543|gb|EEF48041.1| myosin XI, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 2791 bits (7235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1350/1529 (88%), Positives = 1435/1529 (93%), Gaps = 21/1529 (1%)
Query: 2 AAPVNIIVGSHVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKDTEAPP 61
A VNIIVGSHVWVE P++AW+DGEVFKI+ EEVHVH +NG+TVI NISKVFPKDTEAPP
Sbjct: 6 ATAVNIIVGSHVWVEDPKVAWIDGEVFKINGEEVHVHASNGKTVIANISKVFPKDTEAPP 65
Query: 62 GGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYK 121
GGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYK
Sbjct: 66 GGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYK 125
Query: 122 GAQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSG 181
GA FGELSPHVFA+ADVAYRAM+NEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSG
Sbjct: 126 GAGFGELSPHVFAVADVAYRAMMNEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSG 185
Query: 182 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVE+QFDKNGRISGAAVRTYLLER
Sbjct: 186 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAVRTYLLER 245
Query: 242 SRVCQISDPERNYHCFYLLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLA 301
SRVCQISDPERNYHCFYLLCAAP E R K+KL DPKSFHYLNQSNCYALDGVDD EEY+A
Sbjct: 246 SRVCQISDPERNYHCFYLLCAAPLEERAKYKLEDPKSFHYLNQSNCYALDGVDDAEEYIA 305
Query: 302 TRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELL 361
TRRAMDIVGISEEEQ+AIFRVVAA+LHLGNIEFAKG+E DSSVIKDE+SRFHLNTTAELL
Sbjct: 306 TRRAMDIVGISEEEQEAIFRVVAAVLHLGNIEFAKGKEIDSSVIKDERSRFHLNTTAELL 365
Query: 362 KCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIG 421
KCDAKSLEDALI RVMVTPEEVITRTLDPV A+ SRDALAKT+YSRLFDWLVDKIN+SIG
Sbjct: 366 KCDAKSLEDALIKRVMVTPEEVITRTLDPVGALVSRDALAKTIYSRLFDWLVDKINNSIG 425
Query: 422 QDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINW 481
QDPNS+ +IGVLDIYGFESFK NSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINW
Sbjct: 426 QDPNSKQLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINW 485
Query: 482 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLS 541
SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFK+NKRFIKPKLS
Sbjct: 486 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLS 545
Query: 542 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGLFPPLPEESSKSSK 601
RTSFTISHYAGEVTYLAD FLDKNKDYVVAEHQ LLTASKC FV+GLFPPLPEESSKSSK
Sbjct: 546 RTSFTISHYAGEVTYLADQFLDKNKDYVVAEHQDLLTASKCFFVAGLFPPLPEESSKSSK 605
Query: 602 FSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIR 661
FSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNN L+P IFENANIIQQLRCGGVLEAIR
Sbjct: 606 FSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPMIFENANIIQQLRCGGVLEAIR 665
Query: 662 ISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGLKGYQIGKTKVFLRA 721
ISCAGYPTRRTFYEFL RFGVLAP+VL+GN+DDKVAC+ ILDK GL GYQIGKTKVFLRA
Sbjct: 666 ISCAGYPTRRTFYEFLLRFGVLAPEVLEGNHDDKVACQMILDKRGLNGYQIGKTKVFLRA 725
Query: 722 GQMAELDARRAEVLGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQL 781
GQMAELDARRAEVLGNAAR IQRQ RTYIARKEFIALRK+A+ LQS+ RG+LA KL+EQL
Sbjct: 726 GQMAELDARRAEVLGNAARTIQRQSRTYIARKEFIALRKSAVHLQSHCRGVLARKLFEQL 785
Query: 782 RREAAALKIQKNFHSYTARTSYLTARSSAIQLQTGLRAMVARNEFRFRKQTKAAIIIEAY 841
RR+AAALKIQKNF YTAR SYLT SSA+ LQTGLRAM AR+EFRFRKQTKAAI I+A
Sbjct: 786 RRQAAALKIQKNFRRYTARKSYLTLHSSAVTLQTGLRAMTARDEFRFRKQTKAAIAIQAQ 845
Query: 842 LRRHTACSYYKSLKKAAVITQCGWRRRVARRELRNLKMAARETGALKEAKDKLEKRVEEL 901
+R H A SYYK L+KAA+++QCGWR+RVARRELR LKMAARETGALKEAKDKLEKRVEEL
Sbjct: 846 VRCHIAYSYYKRLQKAALVSQCGWRQRVARRELRKLKMAARETGALKEAKDKLEKRVEEL 905
Query: 902 TWRLQFEKQLRTNLEEEKAQEIAKLQDALQAMQLQVEEANFRILKEQEAARKAIEEAPPI 961
TWRLQ EK+LRT+LEEEKAQEI+KLQDAL AMQ+QVEEAN R++KEQEAARKAIE+APP+
Sbjct: 906 TWRLQLEKRLRTDLEEEKAQEISKLQDALHAMQMQVEEANARVIKEQEAARKAIEDAPPV 965
Query: 962 VKETPVIVHDTEKIESLTAEVDSLKALLLSERQSAEEARKACMDAEVRNTELVKKLED-- 1019
+KETPVIV DTEK+E L AEV+SLKALLLSE+Q+AE+ARKAC DAE RN+EL +KLED
Sbjct: 966 IKETPVIVQDTEKVEKLMAEVESLKALLLSEKQAAEQARKACADAEARNSELGRKLEDAA 1025
Query: 1020 -------------------TEEKNQVIRQQALAMSPTGKSLSARPKTLVIQRTPENGNVQ 1060
+E +NQV+RQQAL MSPTGKSLSARPKT++IQRTPENGNV
Sbjct: 1026 QKADQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKSLSARPKTIIIQRTPENGNVA 1085
Query: 1061 NGEMKVTPDVTLAVTSAREPESEEKPQKSLNEKQQENQDLLIKCVSQNLGFSRSKPVAAS 1120
NGEMKV D+ +A +AREPESEEKPQKSLNEKQQENQDLL+KC+SQNLGFS KPVAA
Sbjct: 1086 NGEMKVASDMIVATPNAREPESEEKPQKSLNEKQQENQDLLVKCISQNLGFSGGKPVAAC 1145
Query: 1121 VIYKCLLHWRSFEVERTTVFDRIIQTIASAIEVQDNNDVLAYWLSNSSTLLLLLQHTLKA 1180
++YKCLLHWRSFEVERT+VFDRIIQTIASAIEV DNNDVLAYWLSNSS LLLLLQHTLKA
Sbjct: 1146 IVYKCLLHWRSFEVERTSVFDRIIQTIASAIEVPDNNDVLAYWLSNSSALLLLLQHTLKA 1205
Query: 1181 SGAASLTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNGRGLGRLDDLRQVEAKYPALL 1240
SGAASLTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNGR L RLDDLRQVEAKYPALL
Sbjct: 1206 SGAASLTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNGRALSRLDDLRQVEAKYPALL 1265
Query: 1241 FKQQLTAFLEKIYGMIRDNLKKDISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIAH 1300
FKQQLTAFLEKIYGMIRDNLKK+ISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIAH
Sbjct: 1266 FKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIAH 1325
Query: 1301 WQSIVKSLNSYLKTMKVNYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVK 1360
WQSIVKSLNSYLK MK NYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVK
Sbjct: 1326 WQSIVKSLNSYLKIMKANYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVK 1385
Query: 1361 AGLAELEQWCYDATEEYAGSAWDELKHIRQAVGFLVINQKPKKTLNEITKELCPVLSIQQ 1420
AGLAELEQWCY+ATEE+AGSAWDELKHIRQAVGFLVI+QKPKKTL+EITKELCPVLSIQQ
Sbjct: 1386 AGLAELEQWCYEATEEFAGSAWDELKHIRQAVGFLVIHQKPKKTLSEITKELCPVLSIQQ 1445
Query: 1421 LYRISTMYWDDKYGTHSVSSEVISSMRVLMTEDSNNAVSSSFLLDDDSSIPFTVDDISKS 1480
LYRISTMYWDDKYGTHSVSS+VISSMRV+MTEDSNNAVSSSFLLDDDSSIPFTVDDISKS
Sbjct: 1446 LYRISTMYWDDKYGTHSVSSDVISSMRVMMTEDSNNAVSSSFLLDDDSSIPFTVDDISKS 1505
Query: 1481 LQQVDIADVEPPAVIRENSGFGFLLPRTE 1509
++QVDIA+++PP +IRENSGFGFLLPR+E
Sbjct: 1506 MKQVDIAEIDPPPLIRENSGFGFLLPRSE 1534
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224091182|ref|XP_002309201.1| predicted protein [Populus trichocarpa] gi|222855177|gb|EEE92724.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|297738619|emb|CBI27864.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359484294|ref|XP_002279028.2| PREDICTED: myosin-Vb-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297743058|emb|CBI35925.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359482502|ref|XP_002274978.2| PREDICTED: myosin-H heavy chain-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|56201391|dbj|BAD72949.1| myosin XI [Nicotiana tabacum] | Back alignment and taxonomy information |
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| >gi|116047947|gb|ABJ53199.1| myosin XI-K [Nicotiana benthamiana] | Back alignment and taxonomy information |
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| >gi|356564776|ref|XP_003550624.1| PREDICTED: myosin-Vb-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356545743|ref|XP_003541295.1| PREDICTED: myosin-Vb-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1509 | ||||||
| TAIR|locus:2007938 | 1520 | MYA1 "myosin 1" [Arabidopsis t | 0.996 | 0.989 | 0.695 | 0.0 | |
| TAIR|locus:2020270 | 1500 | XIB "myosin XI B" [Arabidopsis | 0.979 | 0.985 | 0.599 | 0.0 | |
| TAIR|locus:2117768 | 1516 | XIH [Arabidopsis thaliana (tax | 0.988 | 0.983 | 0.584 | 0.0 | |
| TAIR|locus:2149932 | 1545 | XIK [Arabidopsis thaliana (tax | 0.675 | 0.659 | 0.812 | 0.0 | |
| TAIR|locus:2199449 | 1529 | XIE [Arabidopsis thaliana (tax | 0.849 | 0.838 | 0.633 | 0.0 | |
| TAIR|locus:2025535 | 1538 | XIC [Arabidopsis thaliana (tax | 0.689 | 0.676 | 0.719 | 0.0 | |
| TAIR|locus:2045198 | 1556 | XIF "myosin-like protein XIF" | 0.724 | 0.703 | 0.645 | 0.0 | |
| TAIR|locus:2039007 | 1493 | XIG "myosin-like protein XIG" | 0.929 | 0.939 | 0.527 | 0.0 | |
| TAIR|locus:2197773 | 1730 | XIA "myosin XI A" [Arabidopsis | 0.671 | 0.585 | 0.639 | 0.0 | |
| TAIR|locus:2046570 | 1770 | XID "myosin XI D" [Arabidopsis | 0.721 | 0.615 | 0.599 | 0.0 |
| TAIR|locus:2007938 MYA1 "myosin 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 5411 (1909.8 bits), Expect = 0., P = 0.
Identities = 1061/1525 (69%), Positives = 1226/1525 (80%)
Query: 1 MAAPVNIIVGSHVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKDTEAP 60
MAAPV IIVGSHVWVE P LAW+DGEV +I VHV T G+TV+TN+ FPKDTEAP
Sbjct: 1 MAAPV-IIVGSHVWVEDPHLAWIDGEVTRIDGINVHVKTKKGKTVVTNV--YFPKDTEAP 57
Query: 61 PGGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQY 120
GGVDDMTKLSYLHEPGVL NL RYELNEIYTYTGNILIA+NPFQRLPH+Y+T MMEQY
Sbjct: 58 SGGVDDMTKLSYLHEPGVLRNLETRYELNEIYTYTGNILIAVNPFQRLPHIYETDMMEQY 117
Query: 121 KGAQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS 180
KG GELSPHVFAI D AYRAMINEGK+NSILVSGESGAGKTETTKMLMRYLA+LGGRS
Sbjct: 118 KGIALGELSPHVFAIGDAAYRAMINEGKNNSILVSGESGAGKTETTKMLMRYLAFLGGRS 177
Query: 181 GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLE 240
GVEGRTVEQQVLESNPVLEAFGNAKT+RNNNSSRFGKFVE+QFDKNGRISGAA+RTYLLE
Sbjct: 178 GVEGRTVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLE 237
Query: 241 RSRVCQISDPERNYHCFYLLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
RSRVCQISDPERNYHCFYLLCAAPPE +K+KL +P FHYLNQS+CY LDGVDD EYL
Sbjct: 238 RSRVCQISDPERNYHCFYLLCAAPPEDIKKYKLENPHKFHYLNQSSCYKLDGVDDASEYL 297
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TRRAMD+VGIS EEQ+AIFRVVAAILHLGNI+F KGEE DSSVIKD+ SR HLN AEL
Sbjct: 298 ETRRAMDVVGISNEEQEAIFRVVAAILHLGNIDFGKGEEIDSSVIKDKDSRSHLNMAAEL 357
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
L C+A+SLEDALI RVMVTPEE+ITRTLDP A+ SRD LAKT+YS LFDW+V+KIN+SI
Sbjct: 358 LMCNAQSLEDALIRRVMVTPEEIITRTLDPDNAIASRDTLAKTIYSHLFDWIVNKINTSI 417
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
GQDP S++IIGVLDIYGFESFK NSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEI
Sbjct: 418 GQDPRSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIA 477
Query: 481 WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKL 540
WSYIEF+DNQDVL+LIEKKPGGII+LLDEACMFPKSTHETF+QKL+QTFK ++RF KPKL
Sbjct: 478 WSYIEFIDNQDVLELIEKKPGGIISLLDEACMFPKSTHETFSQKLFQTFKEHERFAKPKL 537
Query: 541 SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXX 600
SRT FTISHYAGEVTY ++ F+DKNKDY+VAEHQ L TAS C FV+G
Sbjct: 538 SRTDFTISHYAGEVTYQSNHFIDKNKDYIVAEHQALFTASNCKFVAGLFHALHEDSSRSS 597
Query: 601 XXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAI 660
IGSRFK QL SLME+LN TEPHYIRC+KPNN L+P IFEN N+I QLRCGGVLEAI
Sbjct: 598 KFSSIGSRFKQQLHSLMESLNGTEPHYIRCIKPNNVLKPGIFENFNVIHQLRCGGVLEAI 657
Query: 661 RISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGLKGYQIGKTKVFLR 720
RISCAGYPTR FY+FL RFG+LAP+VL+GNYDDKVAC+ ILDK L YQIGKTK+FLR
Sbjct: 658 RISCAGYPTRLAFYDFLDRFGLLAPEVLEGNYDDKVACQMILDKKSLTDYQIGKTKIFLR 717
Query: 721 AGQMAELDARRAEVLGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQ 780
AGQMAELDARRAEVLGNAAR+IQRQ RT +ARK + ++R AAIVLQS+ RG +A ++++
Sbjct: 718 AGQMAELDARRAEVLGNAARVIQRQFRTCMARKNYRSIRNAAIVLQSFLRGEIARAVHKK 777
Query: 781 LRREAAALKIQKNFHSYTARTSYLTARSSAIQLQTGLRAMVARNEFRFRKQTKAAIIIEA 840
LR EAAAL++QKNF Y R S++T RSS I LQTGLRAM+AR+EFR R+Q KAAI+++A
Sbjct: 778 LRIEAAALRVQKNFRRYVDRKSFVTTRSSTIVLQTGLRAMIARSEFRLRRQRKAAIVLQA 837
Query: 841 YLRRHTACSYYKSLKKAAVITQCGWXXXXXXXXXXNLKMAARETGALKEAKDKLEKRVEE 900
+ R A SYY L+KAA++TQC W LKMAAR+TGALK+AK+KLE+RVEE
Sbjct: 838 HWRGRQAFSYYTRLQKAAIVTQCAWRCRLARRELRMLKMAARDTGALKDAKNKLEQRVEE 897
Query: 901 LTWRLQFEKQLRTNLEEEKAQEIAKLQDALQAMQLQVEEANFRILKEQEAARKAIEEAPP 960
L+ RL EK+LRT+LEE K QE+AKLQ+AL M+LQ++E ++KEQEAAR AIEEA
Sbjct: 898 LSLRLHLEKRLRTDLEEAKVQEVAKLQEALHTMRLQLKETTAMVVKEQEAARVAIEEASS 957
Query: 961 IVKETPVIVHDTEKIESLTAEVDSLKALLLSERQSAEEARKACMDAEVRNTELVKKLEDT 1020
+ KE PV+V DTEKI+SL+ E+D LK LL SE A+EA+ A A V+N EL KKLE+
Sbjct: 958 VNKE-PVVVEDTEKIDSLSNEIDRLKGLLSSETHKADEAQHAYQSALVQNEELCKKLEEA 1016
Query: 1021 EEK-----NQVIRQQALAMSPTGKSLSARPKTLVIQRT-------PENGNVQNGEMKVTP 1068
K + V R Q S ++ R +TL I T P+ +Q K T
Sbjct: 1017 GRKIDQLQDSVQRFQEKVFSLESENKVLRQQTLTISPTTRALALRPKTTIIQRTPEKDTF 1076
Query: 1069 DVTLAVTSAREPESEEKPQKSLNEKQQENQDLLIKCVSQNLGFSRSKPVAASVIYKCLLH 1128
T +EPE+E++PQKSLN+KQQENQ+LL+K +S+++GFS KPVAA +IYKCL+H
Sbjct: 1077 S-NGETTQLQEPETEDRPQKSLNQKQQENQELLLKSISEDIGFSEGKPVAACLIYKCLIH 1135
Query: 1129 WRSFEVERTTVFDRIIQTIASAIEVQDNNDVLAYWXXXXXXXXXXXQHTLKASGAASLTP 1188
WRSFEVERT++F+RII+TIASAIE+Q+N+DVL YW Q TLKA S+T
Sbjct: 1136 WRSFEVERTSIFNRIIETIASAIEMQENSDVLCYWLSNSATLLMFLQRTLKAGATGSITT 1195
Query: 1189 QRRRTTSASLFGRMSQGLRASPQSAGLSFLNXXXXXXXXXXX-QVEAKYPALLFKQQLTA 1247
RRR +SLFGR+SQ R SPQSAG F+ QVEAKYPALLFKQQLTA
Sbjct: 1196 PRRRGMPSSLFGRVSQSFRGSPQSAGFPFMTGRAIGGGLDELRQVEAKYPALLFKQQLTA 1255
Query: 1248 FLEKIYGMIRDNLKKDISPLLGLCIQAPRTSRASLVKGRSQA---NAVAQQALIAHWQSI 1304
FLEKIYGMIRD +KK+ISPLL CIQ PRT R+ LVKGRSQ N VA + +IAHWQ+I
Sbjct: 1256 FLEKIYGMIRDKMKKEISPLLASCIQVPRTPRSGLVKGRSQNTQNNVVAPKPMIAHWQNI 1315
Query: 1305 VKSLNSYLKTMKVNYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLA 1364
V LN +L+TM+ NYVP L+ KVF QIFSFINVQLFNSLLLRRECCSFSNGEYVK GLA
Sbjct: 1316 VTCLNGHLRTMRANYVPSLLISKVFGQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLA 1375
Query: 1365 ELEQWCYDATEEYAGSAWDELKHIRQAVGFLVINQKPKKTLNEITKELCPVLSIQQLYRI 1424
ELE+WC+DATEE+ GSAWDELKHIRQAVGFLVI+QKPKK+L EIT ELCPVLSIQQLYRI
Sbjct: 1376 ELEKWCHDATEEFVGSAWDELKHIRQAVGFLVIHQKPKKSLKEITTELCPVLSIQQLYRI 1435
Query: 1425 STMYWDDKYGTHSVSSEVISSMRVLMTEDSNNAVXXXXXXXXXXXIPFTVDDISKSLQQV 1484
STMYWDDKYGTHSVS+EVI++MR +++ S +A+ IPF++DDISKS+Q V
Sbjct: 1436 STMYWDDKYGTHSVSTEVIATMRAEVSDVSKSAISNSFLLDDDSSIPFSLDDISKSMQNV 1495
Query: 1485 DIADVEPPAVIRENSGFGFLLPRTE 1509
++A+V+PP +IR+NS F FLL R++
Sbjct: 1496 EVAEVDPPPLIRQNSNFMFLLERSD 1520
|
|
| TAIR|locus:2020270 XIB "myosin XI B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2117768 XIH [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2149932 XIK [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2199449 XIE [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2025535 XIC [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045198 XIF "myosin-like protein XIF" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2039007 XIG "myosin-like protein XIG" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2197773 XIA "myosin XI A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2046570 XID "myosin XI D" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1509 | |||
| cd01384 | 674 | cd01384, MYSc_type_XI, Myosin motor domain, plant- | 0.0 | |
| smart00242 | 677 | smart00242, MYSc, Myosin | 0.0 | |
| cd00124 | 679 | cd00124, MYSc, Myosin motor domain | 0.0 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 0.0 | |
| pfam00063 | 679 | pfam00063, Myosin_head, Myosin head (motor domain) | 0.0 | |
| cd01380 | 691 | cd01380, MYSc_type_V, Myosin motor domain, type V | 0.0 | |
| cd01377 | 693 | cd01377, MYSc_type_II, Myosin motor domain, type I | 0.0 | |
| cd01378 | 674 | cd01378, MYSc_type_I, Myosin motor domain, type I | 0.0 | |
| cd01381 | 671 | cd01381, MYSc_type_VII, Myosin motor domain, type | 0.0 | |
| cd01383 | 677 | cd01383, MYSc_type_VIII, Myosin motor domain, plan | 0.0 | |
| cd01382 | 717 | cd01382, MYSc_type_VI, Myosin motor domain, type V | 0.0 | |
| cd01387 | 677 | cd01387, MYSc_type_XV, Myosin motor domain, type X | 0.0 | |
| cd01385 | 692 | cd01385, MYSc_type_IX, Myosin motor domain, type I | 1e-178 | |
| PTZ00014 | 821 | PTZ00014, PTZ00014, myosin-A; Provisional | 1e-177 | |
| cd01379 | 653 | cd01379, MYSc_type_III, Myosin motor domain, type | 1e-165 | |
| cd01386 | 767 | cd01386, MYSc_type_XVIII, Myosin motor domain, typ | 5e-74 | |
| pfam01843 | 105 | pfam01843, DIL, DIL domain | 2e-41 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 3e-08 | |
| pfam02736 | 42 | pfam02736, Myosin_N, Myosin N-terminal SH3-like do | 2e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 4e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-06 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-05 | |
| COG1340 | 294 | COG1340, COG1340, Uncharacterized archaeal coiled- | 4e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 6e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-05 | |
| PRK12704 | 520 | PRK12704, PRK12704, phosphodiesterase; Provisional | 2e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-04 | |
| PRK00409 | 782 | PRK00409, PRK00409, recombination and DNA strand e | 6e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 9e-04 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.001 | |
| TIGR00618 | 1042 | TIGR00618, sbcc, exonuclease SbcC | 0.001 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.002 | |
| PRK12704 | 520 | PRK12704, PRK12704, phosphodiesterase; Provisional | 0.003 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 0.003 | |
| pfam13868 | 349 | pfam13868, Trichoplein, Tumour suppressor, Mitosta | 0.004 |
| >gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
Score = 1462 bits (3788), Expect = 0.0
Identities = 588/674 (87%), Positives = 623/674 (92%)
Query: 62 GGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYK 121
GVDDMTKLSYLHEPGVL NL RYELNEIYTYTGNILIA+NPFQRLPHLYD HMMEQYK
Sbjct: 1 EGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAVNPFQRLPHLYDVHMMEQYK 60
Query: 122 GAQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSG 181
GA GELSPHVFAIAD AYRAMINEGKS SILVSGESGAGKTETTKMLMRYLAY+GGR+G
Sbjct: 61 GAALGELSPHVFAIADAAYRAMINEGKSQSILVSGESGAGKTETTKMLMRYLAYMGGRAG 120
Query: 182 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVE+QFD GRISGAA+RTYLLER
Sbjct: 121 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDDYGRISGAAIRTYLLER 180
Query: 242 SRVCQISDPERNYHCFYLLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLA 301
SRVCQISDPERNYHCFY LCAAPPE +K+KLGDPK FHYLNQSNC+ LDGVDD EEYLA
Sbjct: 181 SRVCQISDPERNYHCFYQLCAAPPEDVKKYKLGDPKEFHYLNQSNCFELDGVDDAEEYLA 240
Query: 302 TRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELL 361
TRRAMD+VGISEEEQDAIFRVVAAILHLGNIEFAKGEE DSSV+KDEKS FHL T AELL
Sbjct: 241 TRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFAKGEEIDSSVLKDEKSEFHLKTAAELL 300
Query: 362 KCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIG 421
CD K+LEDAL RVMVTPEEVIT+ LDP +A SRDALAKT+YSRLFDWLV+KINSSIG
Sbjct: 301 MCDEKALEDALCKRVMVTPEEVITKPLDPDSAELSRDALAKTIYSRLFDWLVNKINSSIG 360
Query: 422 QDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINW 481
QDP+S+++IGVLDIYGFESFK NSFEQFCIN TNEKLQQHFNQHVFKMEQEEYTKEEI+W
Sbjct: 361 QDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDW 420
Query: 482 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLS 541
SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFK +KRF KPKLS
Sbjct: 421 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKDHKRFEKPKLS 480
Query: 542 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGLFPPLPEESSKSSK 601
RT+FTI HYAG+VTY D FLDKNKDYVVAEHQ LL AS C FV+GLFPPLPEE+SKSSK
Sbjct: 481 RTAFTIDHYAGDVTYQTDQFLDKNKDYVVAEHQALLNASNCSFVAGLFPPLPEETSKSSK 540
Query: 602 FSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIR 661
FSSIGSRFK QLQSLMETL++TEPHYIRC+KPNN L+P IFEN N++QQLRCGGVLEAIR
Sbjct: 541 FSSIGSRFKQQLQSLMETLSTTEPHYIRCIKPNNVLKPGIFENENVLQQLRCGGVLEAIR 600
Query: 662 ISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGLKGYQIGKTKVFLRA 721
ISCAGYPTRRTF EFL RFG+LAP+VL G+ DDK AC+KILDKMGLKGYQIGKTKVFLRA
Sbjct: 601 ISCAGYPTRRTFDEFLDRFGILAPEVLKGSSDDKAACKKILDKMGLKGYQIGKTKVFLRA 660
Query: 722 GQMAELDARRAEVL 735
GQMAELDARR EVL
Sbjct: 661 GQMAELDARRTEVL 674
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674 |
| >gnl|CDD|214580 smart00242, MYSc, Myosin | Back alignment and domain information |
|---|
| >gnl|CDD|238071 cd00124, MYSc, Myosin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) | Back alignment and domain information |
|---|
| >gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|216736 pfam01843, DIL, DIL domain | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|111612 pfam02736, Myosin_N, Myosin N-terminal SH3-like domain | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|129705 TIGR00618, sbcc, exonuclease SbcC | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|206039 pfam13868, Trichoplein, Tumour suppressor, Mitostatin | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1509 | |||
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 100.0 | |
| PTZ00014 | 821 | myosin-A; Provisional | 100.0 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 100.0 | |
| cd01384 | 674 | MYSc_type_XI Myosin motor domain, plant-specific t | 100.0 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 100.0 | |
| cd01380 | 691 | MYSc_type_V Myosin motor domain, type V myosins. M | 100.0 | |
| cd01381 | 671 | MYSc_type_VII Myosin motor domain, type VII myosin | 100.0 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| cd01377 | 693 | MYSc_type_II Myosin motor domain, type II myosins. | 100.0 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 100.0 | |
| cd01383 | 677 | MYSc_type_VIII Myosin motor domain, plant-specific | 100.0 | |
| cd01378 | 674 | MYSc_type_I Myosin motor domain, type I myosins. M | 100.0 | |
| cd01387 | 677 | MYSc_type_XV Myosin motor domain, type XV myosins. | 100.0 | |
| cd01385 | 692 | MYSc_type_IX Myosin motor domain, type IX myosins. | 100.0 | |
| cd01382 | 717 | MYSc_type_VI Myosin motor domain, type VI myosins. | 100.0 | |
| cd01379 | 653 | MYSc_type_III Myosin motor domain, type III myosin | 100.0 | |
| smart00242 | 677 | MYSc Myosin. Large ATPases. ATPase; molecular moto | 100.0 | |
| KOG0162 | 1106 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| cd00124 | 679 | MYSc Myosin motor domain. This catalytic (head) do | 100.0 | |
| cd01386 | 767 | MYSc_type_XVIII Myosin motor domain, type XVIII my | 100.0 | |
| PF00063 | 689 | Myosin_head: Myosin head (motor domain); InterPro: | 100.0 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 100.0 | |
| KOG1892 | 1629 | consensus Actin filament-binding protein Afadin [C | 100.0 | |
| PF01843 | 105 | DIL: DIL domain; InterPro: IPR018444 Dilute encode | 99.94 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 99.37 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 98.63 | |
| PF02736 | 42 | Myosin_N: Myosin N-terminal SH3-like domain; Inter | 98.33 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.3 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 98.19 | |
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 98.16 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 97.81 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.08 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.05 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 96.95 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 96.9 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.8 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.78 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 96.56 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 96.55 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 96.44 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 96.33 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.31 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 96.3 | |
| PRK09039 | 343 | hypothetical protein; Validated | 96.24 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 96.24 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.18 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 95.94 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 95.84 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 95.83 | |
| KOG0925 | 699 | consensus mRNA splicing factor ATP-dependent RNA h | 95.81 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 95.79 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 95.73 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 95.64 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 95.63 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 95.57 | |
| PRK11637 | 428 | AmiB activator; Provisional | 95.51 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 95.49 | |
| PF04091 | 311 | Sec15: Exocyst complex subunit Sec15-like ; InterP | 95.47 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 95.37 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 95.25 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 95.21 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 94.92 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 94.91 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 94.86 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 94.82 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 94.78 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 94.74 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 94.73 | |
| PRK09039 | 343 | hypothetical protein; Validated | 94.55 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 94.52 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 94.49 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 94.45 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 94.24 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 94.19 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 94.07 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 93.99 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 93.94 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 93.94 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 93.89 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 93.83 | |
| PF13207 | 121 | AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 | 93.82 | |
| PTZ00014 | 821 | myosin-A; Provisional | 93.82 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 93.76 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 93.74 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 93.59 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 93.57 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 93.56 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 93.32 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 93.28 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 93.26 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 93.25 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 93.23 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 93.21 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 93.21 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 93.17 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 92.93 | |
| PF13401 | 131 | AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S | 92.74 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 92.68 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 92.68 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 92.24 | |
| PF13238 | 129 | AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB | 92.08 | |
| PF13191 | 185 | AAA_16: AAA ATPase domain; PDB: 2V1U_A. | 92.0 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 91.98 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 91.91 | |
| cd02019 | 69 | NK Nucleoside/nucleotide kinase (NK) is a protein | 91.79 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 91.69 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 91.63 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 91.59 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 91.41 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 91.39 | |
| TIGR02322 | 179 | phosphon_PhnN phosphonate metabolism protein/1,5-b | 91.3 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 91.28 | |
| COG0444 | 316 | DppD ABC-type dipeptide/oligopeptide/nickel transp | 91.26 | |
| TIGR03015 | 269 | pepcterm_ATPase putative secretion ATPase, PEP-CTE | 91.08 | |
| TIGR00150 | 133 | HI0065_YjeE ATPase, YjeE family. Members of this f | 90.99 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 90.8 | |
| PRK07196 | 434 | fliI flagellum-specific ATP synthase; Validated | 90.6 | |
| PF00004 | 132 | AAA: ATPase family associated with various cellula | 90.53 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 90.49 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 90.47 | |
| PRK13833 | 323 | conjugal transfer protein TrbB; Provisional | 90.43 | |
| PF01583 | 156 | APS_kinase: Adenylylsulphate kinase; InterPro: IPR | 90.32 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 90.29 | |
| PRK06696 | 223 | uridine kinase; Validated | 90.24 | |
| cd00820 | 107 | PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC | 90.19 | |
| PRK05480 | 209 | uridine/cytidine kinase; Provisional | 90.18 | |
| cd01131 | 198 | PilT Pilus retraction ATPase PilT. PilT is a nucle | 90.17 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 90.13 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 90.11 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 90.06 | |
| PRK09270 | 229 | nucleoside triphosphate hydrolase domain-containin | 90.01 | |
| PRK00300 | 205 | gmk guanylate kinase; Provisional | 89.99 | |
| cd01918 | 149 | HprK_C HprK/P, the bifunctional histidine-containi | 89.95 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 89.87 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 89.81 | |
| cd02023 | 198 | UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. | 89.76 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 89.71 | |
| COG0194 | 191 | Gmk Guanylate kinase [Nucleotide transport and met | 89.7 | |
| PF00485 | 194 | PRK: Phosphoribulokinase / Uridine kinase family; | 89.62 | |
| cd01129 | 264 | PulE-GspE PulE/GspE The type II secretory pathway | 89.62 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 89.53 | |
| PRK12402 | 337 | replication factor C small subunit 2; Reviewed | 89.25 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 89.24 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 89.16 | |
| cd01130 | 186 | VirB11-like_ATPase Type IV secretory pathway compo | 89.1 | |
| PHA02544 | 316 | 44 clamp loader, small subunit; Provisional | 89.1 | |
| TIGR00235 | 207 | udk uridine kinase. Model contains a number of lon | 89.01 | |
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 88.88 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 88.83 | |
| smart00382 | 148 | AAA ATPases associated with a variety of cellular | 88.83 | |
| COG1660 | 286 | Predicted P-loop-containing kinase [General functi | 88.79 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 88.74 | |
| PRK08233 | 182 | hypothetical protein; Provisional | 88.68 | |
| TIGR02173 | 171 | cyt_kin_arch cytidylate kinase, putative. Proteins | 88.65 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 88.63 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 88.55 | |
| PTZ00301 | 210 | uridine kinase; Provisional | 88.53 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 88.53 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 88.5 | |
| PRK05541 | 176 | adenylylsulfate kinase; Provisional | 88.47 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 88.42 | |
| cd02020 | 147 | CMPK Cytidine monophosphate kinase (CMPK) catalyze | 88.39 | |
| PRK07261 | 171 | topology modulation protein; Provisional | 88.27 | |
| cd02028 | 179 | UMPK_like Uridine monophosphate kinase_like (UMPK_ | 88.23 | |
| PRK06547 | 172 | hypothetical protein; Provisional | 88.23 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 88.22 | |
| PRK06762 | 166 | hypothetical protein; Provisional | 88.05 | |
| PRK08972 | 444 | fliI flagellum-specific ATP synthase; Validated | 88.01 | |
| cd02025 | 220 | PanK Pantothenate kinase (PanK) catalyzes the phos | 88.01 | |
| PF03668 | 284 | ATP_bind_2: P-loop ATPase protein family; InterPro | 87.96 | |
| cd00227 | 175 | CPT Chloramphenicol (Cm) phosphotransferase (CPT). | 87.81 | |
| PF07724 | 171 | AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR | 87.8 | |
| PRK08118 | 167 | topology modulation protein; Reviewed | 87.75 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 87.69 | |
| PF00910 | 107 | RNA_helicase: RNA helicase; InterPro: IPR000605 He | 87.68 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 87.67 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 87.62 | |
| TIGR02782 | 299 | TrbB_P P-type conjugative transfer ATPase TrbB. Th | 87.59 | |
| PRK00131 | 175 | aroK shikimate kinase; Reviewed | 87.48 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 87.47 | |
| PF04437 | 494 | RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 | 87.42 | |
| PF05729 | 166 | NACHT: NACHT domain | 87.31 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 87.3 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 87.28 | |
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 87.18 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 87.18 | |
| PRK14961 | 363 | DNA polymerase III subunits gamma and tau; Provisi | 87.15 | |
| PRK14737 | 186 | gmk guanylate kinase; Provisional | 87.12 | |
| PF13245 | 76 | AAA_19: Part of AAA domain | 87.02 | |
| PLN03025 | 319 | replication factor C subunit; Provisional | 86.93 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 86.9 | |
| cd00071 | 137 | GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. | 86.87 | |
| PF12846 | 304 | AAA_10: AAA-like domain | 86.84 | |
| PRK13851 | 344 | type IV secretion system protein VirB11; Provision | 86.81 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 86.75 | |
| PRK00889 | 175 | adenylylsulfate kinase; Provisional | 86.75 | |
| PRK08472 | 434 | fliI flagellum-specific ATP synthase; Validated | 86.73 | |
| cd02024 | 187 | NRK1 Nicotinamide riboside kinase (NRK) is an enzy | 86.67 | |
| TIGR01313 | 163 | therm_gnt_kin carbohydrate kinase, thermoresistant | 86.65 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 86.65 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 86.63 | |
| PRK10078 | 186 | ribose 1,5-bisphosphokinase; Provisional | 86.61 | |
| TIGR01420 | 343 | pilT_fam pilus retraction protein PilT. This model | 86.58 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 86.54 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 86.53 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 86.38 | |
| PRK13900 | 332 | type IV secretion system ATPase VirB11; Provisiona | 86.34 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 86.27 | |
| TIGR02524 | 358 | dot_icm_DotB Dot/Icm secretion system ATPase DotB. | 86.23 | |
| PRK09099 | 441 | type III secretion system ATPase; Provisional | 86.18 | |
| COG4608 | 268 | AppF ABC-type oligopeptide transport system, ATPas | 86.18 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 86.18 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 86.12 | |
| cd02027 | 149 | APSK Adenosine 5'-phosphosulfate kinase (APSK) cat | 86.0 | |
| PRK06315 | 442 | type III secretion system ATPase; Provisional | 85.87 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 85.76 | |
| PRK12377 | 248 | putative replication protein; Provisional | 85.67 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 85.61 | |
| PRK14738 | 206 | gmk guanylate kinase; Provisional | 85.6 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 85.56 | |
| cd01120 | 165 | RecA-like_NTPases RecA-like NTPases. This family i | 85.56 | |
| TIGR00554 | 290 | panK_bact pantothenate kinase, bacterial type. Sho | 85.34 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 85.3 | |
| TIGR03263 | 180 | guanyl_kin guanylate kinase. Members of this famil | 85.3 | |
| PRK12704 | 520 | phosphodiesterase; Provisional | 85.23 | |
| TIGR02525 | 372 | plasmid_TraJ plasmid transfer ATPase TraJ. Members | 85.2 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 85.18 | |
| PRK00440 | 319 | rfc replication factor C small subunit; Reviewed | 85.15 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 85.05 | |
| PRK10751 | 173 | molybdopterin-guanine dinucleotide biosynthesis pr | 85.05 | |
| COG4026 | 290 | Uncharacterized protein containing TOPRIM domain, | 85.02 | |
| PF09304 | 107 | Cortex-I_coil: Cortexillin I, coiled coil; InterPr | 84.98 | |
| PRK06217 | 183 | hypothetical protein; Validated | 84.98 | |
| COG1102 | 179 | Cmk Cytidylate kinase [Nucleotide transport and me | 84.95 | |
| COG0572 | 218 | Udk Uridine kinase [Nucleotide transport and metab | 84.93 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 84.93 | |
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 84.89 | |
| PRK03846 | 198 | adenylylsulfate kinase; Provisional | 84.88 | |
| PF00437 | 270 | T2SE: Type II/IV secretion system protein; InterPr | 84.85 | |
| PTZ00112 | 1164 | origin recognition complex 1 protein; Provisional | 84.79 | |
| KOG0978 | 698 | consensus E3 ubiquitin ligase involved in syntaxin | 84.79 | |
| PRK14956 | 484 | DNA polymerase III subunits gamma and tau; Provisi | 84.75 | |
| cd00464 | 154 | SK Shikimate kinase (SK) is the fifth enzyme in th | 84.74 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 84.73 | |
| PF13671 | 143 | AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 | 84.71 | |
| KOG1103 | 561 | consensus Predicted coiled-coil protein [Function | 84.71 | |
| PRK07721 | 438 | fliI flagellum-specific ATP synthase; Validated | 84.54 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 84.41 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 84.41 | |
| TIGR02902 | 531 | spore_lonB ATP-dependent protease LonB. Members of | 84.39 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 84.35 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 84.27 | |
| COG1125 | 309 | OpuBA ABC-type proline/glycine betaine transport s | 84.24 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 84.2 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 84.18 | |
| PF03205 | 140 | MobB: Molybdopterin guanine dinucleotide synthesis | 83.86 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 83.7 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 83.68 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 83.65 | |
| PRK13894 | 319 | conjugal transfer ATPase TrbB; Provisional | 83.64 | |
| PF03266 | 168 | NTPase_1: NTPase; InterPro: IPR004948 This entry r | 83.62 | |
| cd02021 | 150 | GntK Gluconate kinase (GntK) catalyzes the phospho | 83.27 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 83.22 | |
| PRK05342 | 412 | clpX ATP-dependent protease ATP-binding subunit Cl | 83.21 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 83.19 | |
| cd02029 | 277 | PRK_like Phosphoribulokinase-like (PRK-like) is a | 83.17 | |
| PRK13764 | 602 | ATPase; Provisional | 83.15 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 83.05 | |
| PF02367 | 123 | UPF0079: Uncharacterised P-loop hydrolase UPF0079; | 83.02 | |
| COG2884 | 223 | FtsE Predicted ATPase involved in cell division [C | 83.01 | |
| PRK13342 | 413 | recombination factor protein RarA; Reviewed | 82.91 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 82.9 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 82.86 | |
| PRK06645 | 507 | DNA polymerase III subunits gamma and tau; Validat | 82.85 | |
| PRK04182 | 180 | cytidylate kinase; Provisional | 82.84 | |
| PRK05057 | 172 | aroK shikimate kinase I; Reviewed | 82.78 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 82.77 | |
| PF03215 | 519 | Rad17: Rad17 cell cycle checkpoint protein | 82.72 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 82.7 | |
| smart00333 | 57 | TUDOR Tudor domain. Domain of unknown function pre | 82.66 | |
| PRK09825 | 176 | idnK D-gluconate kinase; Provisional | 82.54 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 82.53 | |
| PF07475 | 171 | Hpr_kinase_C: HPr Serine kinase C-terminal domain; | 82.47 | |
| COG0563 | 178 | Adk Adenylate kinase and related kinases [Nucleoti | 82.45 | |
| PF05622 | 713 | HOOK: HOOK protein; InterPro: IPR008636 This famil | 82.42 | |
| TIGR01360 | 188 | aden_kin_iso1 adenylate kinase, isozyme 1 subfamil | 82.41 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 82.4 | |
| TIGR02533 | 486 | type_II_gspE general secretory pathway protein E. | 82.31 | |
| PF05010 | 207 | TACC: Transforming acidic coiled-coil-containing p | 82.3 | |
| PF13555 | 62 | AAA_29: P-loop containing region of AAA domain | 82.28 | |
| PRK14964 | 491 | DNA polymerase III subunits gamma and tau; Provisi | 82.27 | |
| PRK04040 | 188 | adenylate kinase; Provisional | 82.27 | |
| COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transp | 82.16 | |
| PF07728 | 139 | AAA_5: AAA domain (dynein-related subfamily); Inte | 82.0 | |
| PRK10361 | 475 | DNA recombination protein RmuC; Provisional | 81.94 | |
| PRK08727 | 233 | hypothetical protein; Validated | 81.91 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 81.9 | |
| PRK07667 | 193 | uridine kinase; Provisional | 81.9 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 81.83 | |
| cd03115 | 173 | SRP The signal recognition particle (SRP) mediates | 81.82 | |
| PRK05896 | 605 | DNA polymerase III subunits gamma and tau; Validat | 81.75 | |
| PRK09111 | 598 | DNA polymerase III subunits gamma and tau; Validat | 81.67 | |
| PF00158 | 168 | Sigma54_activat: Sigma-54 interaction domain; Inte | 81.64 | |
| PHA00729 | 226 | NTP-binding motif containing protein | 81.59 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 81.47 | |
| KOG0056 | 790 | consensus Heavy metal exporter HMT1, ABC superfami | 81.45 | |
| TIGR02903 | 615 | spore_lon_C ATP-dependent protease, Lon family. Me | 81.42 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 81.4 | |
| PRK15453 | 290 | phosphoribulokinase; Provisional | 81.37 | |
| cd02034 | 116 | CooC The accessory protein CooC, which contains a | 81.3 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 81.3 | |
| PRK14527 | 191 | adenylate kinase; Provisional | 81.13 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 81.12 | |
| PF10498 | 359 | IFT57: Intra-flagellar transport protein 57 ; Inte | 81.0 | |
| PRK06761 | 282 | hypothetical protein; Provisional | 81.0 | |
| KOG1962 | 216 | consensus B-cell receptor-associated protein and r | 80.87 | |
| COG0802 | 149 | Predicted ATPase or kinase [General function predi | 80.85 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 80.82 | |
| PRK05416 | 288 | glmZ(sRNA)-inactivating NTPase; Provisional | 80.74 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 80.58 | |
| PRK14974 | 336 | cell division protein FtsY; Provisional | 80.5 | |
| PRK08356 | 195 | hypothetical protein; Provisional | 80.44 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 80.21 | |
| KOG4460 | 741 | consensus Nuclear pore complex, Nup88/rNup84 compo | 80.21 | |
| PRK14957 | 546 | DNA polymerase III subunits gamma and tau; Provisi | 80.18 | |
| TIGR03319 | 514 | YmdA_YtgF conserved hypothetical protein YmdA/YtgF | 80.1 | |
| TIGR02881 | 261 | spore_V_K stage V sporulation protein K. Members o | 80.05 | |
| PF03193 | 161 | DUF258: Protein of unknown function, DUF258; Inter | 80.03 | |
| TIGR00176 | 155 | mobB molybdopterin-guanine dinucleotide biosynthes | 80.02 |
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-237 Score=2192.38 Aligned_cols=1361 Identities=34% Similarity=0.529 Sum_probs=1046.9
Q ss_pred ccccccCcEEEEeCCCCCeEeEEEEEec--CCeEEEEe--CCCcEEEEeCCcccCCCCC-CCCCCcCccccCCCCChHHH
Q 000440 4 PVNIIVGSHVWVEHPELAWVDGEVFKIS--AEEVHVHT--TNGQTVITNISKVFPKDTE-APPGGVDDMTKLSYLHEPGV 78 (1509)
Q Consensus 4 ~~~~~~g~~vw~~~~~~~~~~~~v~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~L~~l~e~~v 78 (1509)
..++.+|..||+||.+.+|+.|.|.+.+ ++.++... .+|+...++...+...... ...+++||||.|+|||||+|
T Consensus 3 ~~~~~~g~~~w~p~~e~~Wi~~~~~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~P~~~~vdDLt~LSyLNEpsV 82 (1463)
T COG5022 3 TTNAEVGSGCWIPDEEKGWIWAEIIKEAFNKGKVTEEGKKEDGESVSVKKKVLGNDRIKLPKFDGVDDLTELSYLNEPAV 82 (1463)
T ss_pred ccccccCceeeeeccccceeeeeechhhhhccccccchhhccCcccceeehhcccccccCccccCchhhhhhhccCcHHH
Confidence 3468999999999999999999999743 44443332 4554444544433221111 13589999999999999999
Q ss_pred HHHHHHHhhcCccccccCCeEEEeCCCCCCCCCCCHHHHHHhhccCcCCCCchHHHHHHHHHHHHHhcCCCeEEEecCCC
Q 000440 79 LHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELSPHVFAIADVAYRAMINEGKSNSILVSGES 158 (1509)
Q Consensus 79 l~~L~~R~~~~~iYT~~G~~LiavNP~~~l~~~y~~~~~~~y~~~~~~~~~PHi~aia~~Ay~~m~~~~~~QsIiisGeS 158 (1509)
||||++||.+++||||+|.||||||||+.+| ||+.++|+.|++++..+++|||||||++||+.|...++||||||||||
T Consensus 83 l~nL~kRY~n~~IYTYSGlvLIAvNPy~~L~-iYt~d~i~~Y~~K~r~el~PHvfAIAe~aY~~lls~~eNQtIiISGES 161 (1463)
T COG5022 83 LHNLEKRYNNGQIYTYSGLVLIAVNPYRDLG-IYTDDIIQSYSGKNRLELEPHVFAIAEEAYRNLLSEKENQTIIISGES 161 (1463)
T ss_pred HHHHHHHhhcCceeEEeeeEEEEecCcccCC-CccHHHHHHhccCccccCCchHHHHHHHHHHHHHhcCCCceEEEecCC
Confidence 9999999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhcCCCCCCCccHHHHHHhhchHHHhhcCccccCCCCCCCcccEEEEEecCCCcccceeeeeec
Q 000440 159 GAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYL 238 (1509)
Q Consensus 159 GaGKTe~~k~~~~yla~~~~~~~~~~~~ie~~il~snpilEaFGNAkT~~N~NSSRfgk~~~l~f~~~g~i~ga~i~~yL 238 (1509)
||||||+||+||+|||.+++.++....+||++||++||||||||||||+||||||||||||+|.||.+|.|+||+|+|||
T Consensus 162 GAGKTe~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEAFGNAkTvRNdNSSRFGKyikI~Fd~~g~I~GA~I~~YL 241 (1463)
T COG5022 162 GAGKTENAKRIMQYLASVTSSSTVEISSIEKQILATNPILEAFGNAKTVRNDNSSRFGKYIKIEFDENGEICGAKIETYL 241 (1463)
T ss_pred CCCchHHHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHHhccccccccCCcccccceEEEEECCCCceechhhhhhh
Confidence 99999999999999999998777666789999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccccCCCCccceeeeccccC-ChhHHhhcCCCCCCCCccccCCCccccCCCCcHHHHHHHHhchhhccCCHHHHH
Q 000440 239 LERSRVCQISDPERNYHCFYLLCAA-PPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRRAMDIVGISEEEQD 317 (1509)
Q Consensus 239 LEksRvv~~~~~ErnfHiFYql~~~-~~~~~~~l~L~~~~~~~yl~~~~~~~~~~~dd~~~f~~~~~al~~lg~~~~~~~ 317 (1509)
|||||||+|+.+|||||||||||++ +.+.++.+++..|++|+||++|+|..++|+||+++|..|+.||+++||+.++|.
T Consensus 242 LEKSRVV~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~~~~dY~Yl~~~~~~~I~gIdD~kefk~t~~AlktiGi~~eeq~ 321 (1463)
T COG5022 242 LEKSRVVHQNKNERNYHIFYQLLAGDPEELKKLLLLQNPKDYIYLSQGGCDKIDGIDDAKEFKITLDALKTIGIDEEEQD 321 (1463)
T ss_pred hhhhhhccCCCCccchhhhhhHhcCChHHHHHHhhccChHhhHhHhhcCCCcCCCcccHHHHHHHHHHHHHhCCChHHHH
Confidence 9999999999999999999999995 444555666789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCeEEEecCCCCcccccCccchHHHHHHHHhcCCCHHHHHHHHhhcccccCCceEeccCCHHHHHHhH
Q 000440 318 AIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSR 397 (1509)
Q Consensus 318 ~i~~ilaaiLhLGni~f~~~~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~~~~~e~~~~~l~~~~a~~~r 397 (1509)
.||++||||||||||+|..+++ +.+...+. +.++.||.|||||+..|.+||++|.|++++|.|.+|+|..||..+|
T Consensus 322 ~IF~iLAaILhiGNIef~~~r~-g~a~~~~~---~~~~~~c~LLgId~~~f~k~lvk~~ikt~~E~i~~~~n~~QA~~ir 397 (1463)
T COG5022 322 QIFKILAAILHIGNIEFKEDRN-GAAIFSDN---SVLDKACYLLGIDPSLFVKWLVKRQIKTGGEWIVVPLNLEQALAIR 397 (1463)
T ss_pred HHHHHHHHHHhhcceeeeeccc-chhhcCCc---hHHHHHHHHhCCCHHHHHHHHHHhHhhcCceEEEecCCHHHHHHHH
Confidence 9999999999999999998664 44444443 3599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCCCeEEeeeccccccCCCCCCHHHHHhhhhhhHHHHHHHHHhhhhhHHHhhhc
Q 000440 398 DALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKE 477 (1509)
Q Consensus 398 dalak~lY~~LF~wiv~~iN~~l~~~~~~~~~IgiLDi~GFE~f~~NsfeQlciNyaNEkLq~~f~~~~f~~eq~~y~~E 477 (1509)
|||||+||++||+|||++||.+|..++...+|||||||||||+|+.|||||||||||||||||+||+|||++|||||.+|
T Consensus 398 dslAK~lY~~lFdwiV~rIN~sL~~~~~~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE 477 (1463)
T COG5022 398 DSLAKALYSNLFDWIVDRINKSLDHSAAASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKE 477 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCccccccceeEEeecchhhhccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999987777899999999999999999999999999999999999999999999999999
Q ss_pred CCccccccccchHhHHHhhhc-CcccccccccccccCCCCChHHHHHHHHHHhc--CCCCccCCCCCCCceEEEeeccce
Q 000440 478 EINWSYIEFVDNQDVLDLIEK-KPGGIIALLDEACMFPKSTHETFAQKLYQTFK--SNKRFIKPKLSRTSFTISHYAGEV 554 (1509)
Q Consensus 478 gi~~~~i~~~dn~~~ldlie~-~~~Gil~lLdee~~~p~~~d~~~~~kl~~~~~--~~~~~~~p~~~~~~F~i~Hyag~V 554 (1509)
||+|++|+|.|||+||||||+ .|.|||++|||||++|.|||++|.+||++.+. +++.|.+||+....|+|+||||+|
T Consensus 478 ~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~rf~~~~FvvkHYAgDV 557 (1463)
T COG5022 478 GIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDESFTSKLAQRLNKNSNPKFKKSRFRDNKFVVKHYAGDV 557 (1463)
T ss_pred cCcccccccccCcchhHHHhccCCCchHhhhcHHhcCCCCCchHHHHHHHHHhccccCccccccccCCCceEEEeecccc
Confidence 999999999999999999997 25599999999999999999999999999886 568899999999999999999999
Q ss_pred eeeccchhhhccccchHHHHHHHhhCCchhhhhcCCCCCcCcCCCCCCcchhHHHHHHHHHHHHHHcccCCeeEEecCCC
Q 000440 555 TYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGLFPPLPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPN 634 (1509)
Q Consensus 555 ~Y~~~~flekN~d~~~~~~~~ll~~S~~~~v~~lf~~~~~~~~~~~~~~tv~~~f~~~l~~L~~~l~~t~~h~irCIkPN 634 (1509)
+|+++||++||||++++++++|+.+|+|+||..||+..... .+.++++|+|+.||.||++||++|++|+||||||||||
T Consensus 558 eY~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~~-~~K~~~pT~gs~~K~sl~~Lm~tl~sTqphyIRCIkPN 636 (1463)
T COG5022 558 EYDVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEENI-ESKGRFPTLGSRFKESLNSLMSTLNSTQPHYIRCIKPN 636 (1463)
T ss_pred eeeccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhhhc-cccCCCCcHHHHHHHHHHHHHHHHHhcCCceeEeeCCC
Confidence 99999999999999999999999999999999999954333 34478899999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHHhhccchhHHHhhhhcCCCcccChHHHHHHhhcccCCCCCC-----CCccHHHHHHHHHhcCCC-
Q 000440 635 NALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDG-----NYDDKVACEKILDKMGLK- 708 (1509)
Q Consensus 635 ~~~~~~~fd~~~v~~QLr~~gvle~i~i~~~gyp~r~~~~~F~~ry~~l~~~~~~~-----~~~~~~~~~~ll~~~~~~- 708 (1509)
..|.|+.||+.+|++|||||||+|+|||+|+|||+||+|++|+.||++|.|...+. ..|.+.+|+.||..+.++
T Consensus 637 ~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~~~~~~~~~~~~~~~~~IL~~~~id~ 716 (1463)
T COG5022 637 EEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSWTGEYTWKEDTKNAVKSILEELVIDS 716 (1463)
T ss_pred cccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHhhcCCh
Confidence 99999999999999999999999999999999999999999999999999974332 135789999999998776
Q ss_pred -ccccccceeeeeccchhhhhhhHhhhhhhhHHHHHHHhhhhHHHHHHHHHHHHhHhhhhcccchhhhHHHHHHHHhHHH
Q 000440 709 -GYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLRREAAA 787 (1509)
Q Consensus 709 -~~~iGkTkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~R~~l~R~~~~~~r~a~i~IQ~~~Rg~laR~~~~~~r~~~AA 787 (1509)
.||+|+||||||+|+++.||.+|...+..+++.||++|||++.|++|.+..+.+..+|...+|+..|+....-....++
T Consensus 717 ~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1463)
T COG5022 717 SKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKWRLF 796 (1463)
T ss_pred hheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchHHHhH
Confidence 5999999999999999999999999999999999999999999999999999999999999999999887766666789
Q ss_pred HHhhhhhhhHHHHhhHHHHHhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Q 000440 788 LKIQKNFHSYTARTSYLTARSSAIQLQ-TGLRAMVARNEFRFRKQTKAAIIIEAYLRRHTACSYYKSLKKAAVITQCGWR 866 (1509)
Q Consensus 788 i~IQ~~~R~~~~Rk~y~~~r~a~i~IQ-s~~Rg~~aRr~~~~~~~~~aA~~IQ~~~R~~~~r~~y~~~~ka~~~iQ~~~R 866 (1509)
+++|+.||....|+.|......+..+| ..+|....+.........++++.+|+.||.+..+++|..+.+..+.+|+.+|
T Consensus 797 ~~l~~~~~~~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~~~~kr~~~L~k~~i~~~~~~r 876 (1463)
T COG5022 797 IKLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQR 876 (1463)
T ss_pred HHhhHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhHHHHHHHHHH
Confidence 999999999999999999999999999 6677766666566666688999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000440 867 RRVARRELRNLKMAARETGALKEAKDKLEKRVEELTWRLQFEKQLRTNLEEEKAQEIAKLQDALQAMQLQVEEANFRILK 946 (1509)
Q Consensus 867 ~~~ark~l~~lk~~a~~~~~l~~~~~kLe~kv~eL~~~le~e~~~~~~le~~k~~e~~kL~~~~~eLe~qleel~~~l~~ 946 (1509)
...+++++.+++.+.+++..+......++.++.++...++........... .....|+..+...+ +++ ...
T Consensus 877 ~~~a~r~~~e~k~~~~~~~~l~~~~~~l~~~~~el~~~~~s~~~~~~~~k~---e~~a~lk~~l~~~d--~~~---~~~- 947 (1463)
T COG5022 877 VELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEFKT---ELIARLKKLLNNID--LEE---GPS- 947 (1463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHhhccchhhhhhhHHHH---HHHHHHHHHhhccc--ccc---hhH-
Confidence 999999999999999999999999999999999888776642211111110 11222222111100 000 000
Q ss_pred HHHHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Q 000440 947 EQEAARKAIEEAPPIVKETPVIVHDTEKIESLTAEVDSLKALLLSERQSAEEARKACMDAEVRNT---ELVKKLEDTEEK 1023 (1509)
Q Consensus 947 e~e~~~~~~ee~~~~~~e~~~l~~~~~~i~eL~~e~~~Lk~el~~l~~~l~~~e~e~~~~~~~~e---el~~el~~~eee 1023 (1509)
.+ .. ...++.+|..+..++++.......-+...+....+.....+ ...+++.+...+
T Consensus 948 ----------------~~---~~-~~~~~~~l~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~el~~~~~~l~~~~~~ 1007 (1463)
T COG5022 948 ----------------IE---YV-KLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQ 1007 (1463)
T ss_pred ----------------HH---HH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhcccHHHHHHHHHHHHHHHHhh
Confidence 00 00 01123333333333333333333222222211111111111 111122111111
Q ss_pred HHHHHHHHHhcCcCccccccCccccccccCCCCCcc--cCCccccCCccccccccCCCCCccc---cccc--hhh----H
Q 000440 1024 NQVIRQQALAMSPTGKSLSARPKTLVIQRTPENGNV--QNGEMKVTPDVTLAVTSAREPESEE---KPQK--SLN----E 1092 (1509)
Q Consensus 1024 ~~~L~qq~~~l~~~~~~~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~----~ 1092 (1509)
..-++.+...+++..... ..+.........+...+ .....++... .......+.... +..+ .+. .
T Consensus 1008 ~~~l~~~~~~lk~~~~~~-~~l~~~~~~~~s~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~l~~~r~~~~~~~~q~ 1083 (1463)
T COG5022 1008 YGALQESTKQLKELPVEV-AELQSASKIISSESTELSILKPLQKLKGL---LLLENNQLQARYKALKLRRENSLLDDKQL 1083 (1463)
T ss_pred hhhhhhhhhhcccccchh-hhhhhhhhhhccchhhhhccCcccchhhh---hhHHHHHhhhhHhhhhhcCcccchhHHHH
Confidence 111222211111110000 00000000000000000 0000000000 000000000000 0000 000 0
Q ss_pred HhhhcHHHHHHhhh-cCCCCcC-CcchhHHH-HHHHHHhhhc-chhhhhHHHHHHHHHHHhHhc---cccccchhhHHHH
Q 000440 1093 KQQENQDLLIKCVS-QNLGFSR-SKPVAASV-IYKCLLHWRS-FEVERTTVFDRIIQTIASAIE---VQDNNDVLAYWLS 1165 (1509)
Q Consensus 1093 ~~~~~~~~L~~~i~-~~~~~~~-~~p~pA~i-l~~cl~~~~~-~~~~~~~ll~~ii~~i~~~i~---~~~d~~~lafWLS 1165 (1509)
...+....+.+.+. .++...+ ..+-||.. .+....+|+. ...+...++...+..++.+.+ ..+-.....||.+
T Consensus 1084 ~~~e~t~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~le~~~~~~~~~~~~~d~~~~~~ 1163 (1463)
T COG5022 1084 YQLESTENLLKTINVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEA 1163 (1463)
T ss_pred HHHHhhhhhhhhhccchhhhhcccccchhhHHHHHHHHhhccchHHhhhhHHHHHHhhccchhccccchhcccccccccc
Confidence 11122222333333 2222211 11224444 3344456665 334445555555555555544 1122345789999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCcccccccccchhhhhhccccCCCCcCCcccccCCccccchhhhHHHhhhhhHHHHHHH
Q 000440 1166 NSSTLLLLLQHTLKASGAASLTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNGRGLGRLDDLRQVEAKYPALLFKQQL 1245 (1509)
Q Consensus 1166 N~~~LL~~Lq~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~~k~p~~~fkq~L 1245 (1509)
|...+++.-.- .... .+..-..+++ ....- +..+++. ..+..|
T Consensus 1164 ~~~~~~~~~~~--------~~~~-~~~~~~~~~~----------------d~~~~---~s~s~v~---------~l~~~l 1206 (1463)
T COG5022 1164 NLEALPSPPPF--------AALS-EKRLYQSALY----------------DEKSK---LSSSEVN---------DLKNEL 1206 (1463)
T ss_pred ccccCCCCCch--------hhcc-hhhhhHhhhh----------------ccccc---ccHHHHH---------HHHHHH
Confidence 99876521000 0000 0000000010 00000 0011111 246678
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhcccc--CCCccccccccCCCcchhhhhhhhhHhHHHHHHHHHHHHHHHHhcCCCHH
Q 000440 1246 TAFLEKIYGMIRDNLKKDISPLLGLCIQ--APRTSRASLVKGRSQANAVAQQALIAHWQSIVKSLNSYLKTMKVNYVPPF 1323 (1509)
Q Consensus 1246 ~~l~~~iy~~l~~~i~~~L~p~l~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~L~~~~~~l~~~~V~~~ 1323 (1509)
..+..++|..|.... .+.+++...+- ......+.+. .++..+..++..+.++++.+++.+.++++.+.+.+.
T Consensus 1207 ~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ll~~~n~i~~~~~s~~~~~~ 1280 (1463)
T COG5022 1207 IALFSKIFSGWPRGD--KLKKLISEGWVPTEYSTSLKGFN----NLNKKFDTPASMSNEKLLSLLNSIDNLLSSYKLEEE 1280 (1463)
T ss_pred HHHHHhccccchhhh--hhhhhhhhccchhhhcccccccc----chhhcccCcccCcHHHHHHHHHHHHHHHHHhhcchh
Confidence 888888888888765 22222211100 0000011100 011122333456778999999999999999999999
Q ss_pred HHHHHHHHHHHhHhHHHHHHhhhcCCCccccchhHHhhchhHHHHHHhhcccccccchHHHhhHHHHHHHHHhhcCCCcC
Q 000440 1324 LVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEQWCYDATEEYAGSAWDELKHIRQAVGFLVINQKPKK 1403 (1509)
Q Consensus 1324 l~~Q~f~QlF~fIna~lFN~Ll~r~~~cs~s~G~qIr~nls~Le~W~~~~~~~~~~~~~~~L~~i~Qa~~lLq~~kk~~~ 1403 (1509)
+..-.++++.-++|+.+||.|..|..-..|+.|.++.+|.+.+.+||+.++ ...+..+|++++||+..+++.++...
T Consensus 1281 ~~~~~i~~~~~~~~~~~~n~L~~~~~~~~~k~~~~~~~n~~~~~~w~~~~~---i~~~~~~l~~l~q~~k~~~~~~~dl~ 1357 (1463)
T COG5022 1281 VLPATINSLLQYINVGLFNALRTKASSLRWKSATEVNYNSEELDDWCREFE---ISDVDEELEELIQAVKVLQLLKDDLN 1357 (1463)
T ss_pred hhhHHHHhHhhhcchhhhhhhhcccCccchhhcccccccchhhhHHHHhhc---ccchHHHHHHHHhhhhhhhhhhCCHH
Confidence 999999999999999999999999999999999999999999999999987 56677899999999999999987777
Q ss_pred CHHHHHHhhCCCCCHHHHHHHHhcCccCCCCCCCCCHHHHHHHHhhhh
Q 000440 1404 TLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVLMT 1451 (1509)
Q Consensus 1404 ~~~~i~~~~C~~Ln~~Ql~kiL~~Y~~d~~e~~~vs~~~i~~v~~~~~ 1451 (1509)
+++++ .+.|.+|+|.|+.+|+.+|.|.++| .++|.++.++|.....
T Consensus 1358 ~~~~~-~~~~~~l~~~~~~~L~~~y~~~~~e-~~l~ke~~~~~~a~~~ 1403 (1463)
T COG5022 1358 KLDEL-LDACYSLNPAEIQNLKSRYDPADKE-NNLPKEILKKIEALLI 1403 (1463)
T ss_pred HHHHH-HHHHHhcCHHHHHHHHHhhhhhccc-CCChHHHHHHHhhhhh
Confidence 77677 6999999999999999999999998 5999999977655444
|
|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01380 MYSc_type_V Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >cd01381 MYSc_type_VII Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01377 MYSc_type_II Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >cd01378 MYSc_type_I Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >cd01387 MYSc_type_XV Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >cd01385 MYSc_type_IX Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >cd01382 MYSc_type_VI Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >cd01379 MYSc_type_III Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >smart00242 MYSc Myosin | Back alignment and domain information |
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| >KOG0162 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00124 MYSc Myosin motor domain | Back alignment and domain information |
|---|
| >cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >KOG1892 consensus Actin filament-binding protein Afadin [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0925 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A | Back alignment and domain information |
|---|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C | Back alignment and domain information |
|---|
| >PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >TIGR00150 HI0065_YjeE ATPase, YjeE family | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >PRK07196 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >PRK13833 conjugal transfer protein TrbB; Provisional | Back alignment and domain information |
|---|
| >PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK06696 uridine kinase; Validated | Back alignment and domain information |
|---|
| >cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis | Back alignment and domain information |
|---|
| >PRK05480 uridine/cytidine kinase; Provisional | Back alignment and domain information |
|---|
| >cd01131 PilT Pilus retraction ATPase PilT | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed | Back alignment and domain information |
|---|
| >PRK00300 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >cd01918 HprK_C HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 | Back alignment and domain information |
|---|
| >cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PRK12402 replication factor C small subunit 2; Reviewed | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases | Back alignment and domain information |
|---|
| >PHA02544 44 clamp loader, small subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR00235 udk uridine kinase | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >smart00382 AAA ATPases associated with a variety of cellular activities | Back alignment and domain information |
|---|
| >COG1660 Predicted P-loop-containing kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >PRK08233 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02173 cyt_kin_arch cytidylate kinase, putative | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PTZ00301 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PRK05541 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor | Back alignment and domain information |
|---|
| >PRK07261 topology modulation protein; Provisional | Back alignment and domain information |
|---|
| >cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >PRK06547 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK06762 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK08972 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway | Back alignment and domain information |
|---|
| >PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins | Back alignment and domain information |
|---|
| >cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT) | Back alignment and domain information |
|---|
| >PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >PRK08118 topology modulation protein; Reviewed | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB | Back alignment and domain information |
|---|
| >PRK00131 aroK shikimate kinase; Reviewed | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases | Back alignment and domain information |
|---|
| >PF05729 NACHT: NACHT domain | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK14961 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK14737 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF13245 AAA_19: Part of AAA domain | Back alignment and domain information |
|---|
| >PLN03025 replication factor C subunit; Provisional | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 | Back alignment and domain information |
|---|
| >PF12846 AAA_10: AAA-like domain | Back alignment and domain information |
|---|
| >PRK13851 type IV secretion system protein VirB11; Provisional | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PRK00889 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK08472 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+) | Back alignment and domain information |
|---|
| >TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PRK10078 ribose 1,5-bisphosphokinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01420 pilT_fam pilus retraction protein PilT | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >PRK13900 type IV secretion system ATPase VirB11; Provisional | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB | Back alignment and domain information |
|---|
| >PRK09099 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS) | Back alignment and domain information |
|---|
| >PRK06315 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PRK14738 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01120 RecA-like_NTPases RecA-like NTPases | Back alignment and domain information |
|---|
| >TIGR00554 panK_bact pantothenate kinase, bacterial type | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >TIGR03263 guanyl_kin guanylate kinase | Back alignment and domain information |
|---|
| >PRK12704 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >PRK00440 rfc replication factor C small subunit; Reviewed | Back alignment and domain information |
|---|
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional | Back alignment and domain information |
|---|
| >COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] | Back alignment and domain information |
|---|
| >PF09304 Cortex-I_coil: Cortexillin I, coiled coil; InterPro: IPR015383 This domain is predominantly found in the actin-bundling protein cortexillin I from Dictyostelium discoideum (Slime mold) | Back alignment and domain information |
|---|
| >PRK06217 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG0572 Udk Uridine kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >PRK03846 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] | Back alignment and domain information |
|---|
| >PTZ00112 origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
| >KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK14956 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B | Back alignment and domain information |
|---|
| >KOG1103 consensus Predicted coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK07721 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02902 spore_lonB ATP-dependent protease LonB | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK13894 conjugal transfer ATPase TrbB; Provisional | Back alignment and domain information |
|---|
| >PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency [] | Back alignment and domain information |
|---|
| >cd02021 GntK Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes | Back alignment and domain information |
|---|
| >PRK13764 ATPase; Provisional | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop | Back alignment and domain information |
|---|
| >COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK13342 recombination factor protein RarA; Reviewed | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK06645 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK04182 cytidylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK05057 aroK shikimate kinase I; Reviewed | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF03215 Rad17: Rad17 cell cycle checkpoint protein | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >smart00333 TUDOR Tudor domain | Back alignment and domain information |
|---|
| >PRK09825 idnK D-gluconate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF07475 Hpr_kinase_C: HPr Serine kinase C-terminal domain; InterPro: IPR011104 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] | Back alignment and domain information |
|---|
| >COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms | Back alignment and domain information |
|---|
| >TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >TIGR02533 type_II_gspE general secretory pathway protein E | Back alignment and domain information |
|---|
| >PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules | Back alignment and domain information |
|---|
| >PF13555 AAA_29: P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >PRK14964 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK04040 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >PRK10361 DNA recombination protein RmuC; Provisional | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PRK07667 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes | Back alignment and domain information |
|---|
| >PRK05896 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK09111 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PF00158 Sigma54_activat: Sigma-54 interaction domain; InterPro: IPR002078 Some bacterial regulatory proteins activate the expression of genes from promoters recognised by core RNA polymerase associated with the alternative sigma-54 factor | Back alignment and domain information |
|---|
| >PHA00729 NTP-binding motif containing protein | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02903 spore_lon_C ATP-dependent protease, Lon family | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PRK15453 phosphoribulokinase; Provisional | Back alignment and domain information |
|---|
| >cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >PRK14527 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms | Back alignment and domain information |
|---|
| >PRK06761 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] | Back alignment and domain information |
|---|
| >COG0802 Predicted ATPase or kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK14974 cell division protein FtsY; Provisional | Back alignment and domain information |
|---|
| >PRK08356 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK14957 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF | Back alignment and domain information |
|---|
| >TIGR02881 spore_V_K stage V sporulation protein K | Back alignment and domain information |
|---|
| >PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis | Back alignment and domain information |
|---|
| >TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1509 | ||||
| 2dfs_A | 1080 | 3-D Structure Of Myosin-V Inhibited State Length = | 0.0 | ||
| 1w9j_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 0.0 | ||
| 1w9i_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 0.0 | ||
| 1jwy_A | 776 | Crystal Structure Of The Dynamin A Gtpase Domain Co | 0.0 | ||
| 2aka_A | 776 | Structure Of The Nucleotide-Free Myosin Ii Motor Do | 0.0 | ||
| 2xel_A | 776 | Molecular Mechanism Of Pentachloropseudilin Mediate | 0.0 | ||
| 1g8x_A | 1010 | Structure Of A Genetically Engineered Molecular Mot | 0.0 | ||
| 2jhr_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 0.0 | ||
| 3mnq_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 0.0 | ||
| 1fmv_A | 761 | Crystal Structure Of The Apo Motor Domain Of Dictyo | 0.0 | ||
| 1yv3_A | 762 | The Structural Basis Of Blebbistatin Inhibition And | 0.0 | ||
| 1d0x_A | 761 | Dictyostelium Myosin S1dc (Motor Domain Fragment) C | 0.0 | ||
| 1w9l_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 0.0 | ||
| 1mma_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-180 | ||
| 3myh_X | 762 | Insights Into The Importance Of Hydrogen Bonding In | 1e-180 | ||
| 2y0r_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-180 | ||
| 2y9e_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-180 | ||
| 1w9k_A | 770 | Dictyostelium Discoideum Myosin Ii Motor Domain S45 | 1e-180 | ||
| 2xo8_A | 776 | Crystal Structure Of Myosin-2 In Complex With Tribr | 1e-179 | ||
| 1mmd_A | 762 | Truncated Head Of Myosin From Dictyostelium Discoid | 1e-179 | ||
| 1mmn_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-178 | ||
| 1mmg_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-178 | ||
| 1oe9_A | 795 | Crystal Structure Of Myosin V Motor With Essential | 1e-178 | ||
| 1lvk_A | 762 | X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N | 1e-177 | ||
| 1w8j_A | 766 | Crystal Structure Of Myosin V Motor Domain - Nucleo | 1e-173 | ||
| 3mkd_A | 692 | Crystal Structure Of Myosin-2 Dictyostelium Discoid | 1e-171 | ||
| 2x9h_A | 695 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-169 | ||
| 3i5g_A | 839 | Crystal Structure Of Rigor-Like Squid Myosin S1 Len | 1e-152 | ||
| 1dfk_A | 830 | Nucleotide-Free Scallop Myosin S1-Near Rigor State | 1e-151 | ||
| 2vas_A | 788 | Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo | 1e-151 | ||
| 2x51_A | 789 | M6 Delta Insert1 Length = 789 | 1e-151 | ||
| 1dfl_A | 831 | Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra | 1e-151 | ||
| 1b7t_A | 835 | Myosin Digested By Papain Length = 835 | 1e-150 | ||
| 1kk7_A | 837 | Scallop Myosin In The Near Rigor Conformation Lengt | 1e-150 | ||
| 4dbq_A | 788 | Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos | 1e-150 | ||
| 1qvi_A | 840 | Crystal Structure Of Scallop Myosin S1 In The Pre-P | 1e-150 | ||
| 2os8_A | 840 | Rigor-Like Structures Of Muscle Myosins Reveal Key | 1e-150 | ||
| 2ec6_A | 838 | Placopecten Striated Muscle Myosin Ii Length = 838 | 1e-150 | ||
| 3l9i_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant | 1e-148 | ||
| 2bki_A | 858 | Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St | 1e-147 | ||
| 2bkh_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 1e-147 | ||
| 4e7z_A | 798 | Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F | 1e-147 | ||
| 2v26_A | 784 | Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L | 1e-147 | ||
| 4dbp_A | 814 | Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal | 1e-147 | ||
| 4anj_A | 1052 | Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St | 1e-147 | ||
| 4e7s_A | 798 | Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat | 1e-146 | ||
| 4dbr_A | 786 | Myosin Vi D179y (md) Pre-powerstroke State Length = | 1e-146 | ||
| 2w4g_M | 840 | Isometrically Contracting Insect Asynchronous Fligh | 1e-142 | ||
| 1i84_S | 1184 | Cryo-Em Structure Of The Heavy Meromyosin Subfragme | 1e-141 | ||
| 3dtp_B | 973 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-141 | ||
| 3dtp_A | 971 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-141 | ||
| 3j04_A | 909 | Em Structure Of The Heavy Meromyosin Subfragment Of | 1e-140 | ||
| 1br1_A | 820 | Smooth Muscle Myosin Motor Domain-Essential Light C | 1e-139 | ||
| 1br2_A | 791 | Smooth Muscle Myosin Motor Domain Complexed With Mg | 1e-136 | ||
| 4db1_A | 783 | Cardiac Human Myosin S1dc, Beta Isoform Complexed W | 1e-135 | ||
| 2ycu_A | 995 | Crystal Structure Of Human Non Muscle Myosin 2c In | 1e-134 | ||
| 4a7f_C | 697 | Structure Of The Actin-Tropomyosin-Myosin Complex ( | 1e-133 | ||
| 2mys_A | 843 | Myosin Subfragment-1, Alpha Carbon Coordinates Only | 1e-132 | ||
| 1lkx_A | 697 | Motor Domain Of Myoe, A Class-I Myosin Length = 697 | 1e-132 | ||
| 1m8q_A | 840 | Molecular Models Of Averaged Rigor Crossbridges Fro | 1e-132 |
| >pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 | Back alignment and structure |
|
| >pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 | Back alignment and structure |
| >pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 | Back alignment and structure |
| >pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 | Back alignment and structure |
| >pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 | Back alignment and structure |
| >pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 | Back alignment and structure |
| >pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 | Back alignment and structure |
| >pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 | Back alignment and structure |
| >pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 | Back alignment and structure |
| >pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 | Back alignment and structure |
| >pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 | Back alignment and structure |
| >pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 | Back alignment and structure |
| >pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 | Back alignment and structure |
| >pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 | Back alignment and structure |
| >pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 | Back alignment and structure |
| >pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 | Back alignment and structure |
| >pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 | Back alignment and structure |
| >pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 | Back alignment and structure |
| >pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 | Back alignment and structure |
| >pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 | Back alignment and structure |
| >pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 | Back alignment and structure |
| >pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 | Back alignment and structure |
| >pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 | Back alignment and structure |
| >pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 | Back alignment and structure |
| >pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 | Back alignment and structure |
| >pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 | Back alignment and structure |
| >pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 | Back alignment and structure |
| >pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 | Back alignment and structure |
| >pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 | Back alignment and structure |
| >pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 | Back alignment and structure |
| >pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 | Back alignment and structure |
| >pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 | Back alignment and structure |
| >pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 | Back alignment and structure |
| >pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 | Back alignment and structure |
| >pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 | Back alignment and structure |
| >pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 | Back alignment and structure |
| >pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 | Back alignment and structure |
| >pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 | Back alignment and structure |
| >pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 | Back alignment and structure |
| >pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 | Back alignment and structure |
| >pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 | Back alignment and structure |
| >pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 | Back alignment and structure |
| >pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 | Back alignment and structure |
| >pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 | Back alignment and structure |
| >pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 | Back alignment and structure |
| >pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 1338 bits (3464), Expect = 0.0
Identities = 410/1083 (37%), Positives = 597/1083 (55%), Gaps = 73/1083 (6%)
Query: 1 MAAPVNIIVGSHVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKDTEAP 60
MAA + VW+ PE W E+ K V + + PK E P
Sbjct: 1 MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELP 60
Query: 61 PG-------GVDDMTKLSYLHEPGVLHNLAARY-ELNEIYTYTGNILIAINPFQRLPHLY 112
P G +D+T LSYLHEP VLHNL R+ + IYTY G +L+AINP+++LP +Y
Sbjct: 61 PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IY 119
Query: 113 DTHMMEQYKGAQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRY 172
++ Y G G++ PH+FA+A+ AY+ M + ++ SI+VSGESGAGKT + K MRY
Sbjct: 120 GEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRY 179
Query: 173 LAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGA 232
A + G + VE++VL SNP++E+ GNAKT RN+NSSRFGK++E+ FDK RI GA
Sbjct: 180 FATVSGSAS--EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGA 237
Query: 233 AVRTYLLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLGDPKSFHYLNQSNCYALD 291
+RTYLLE+SRV ++ ERNYH FY LCA A + +LG+ FHY Q +D
Sbjct: 238 NMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVID 297
Query: 292 GVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSR 351
G+DD +E + TR+A ++GIS+ Q IFR++A ILHLGN+EFA + ++
Sbjct: 298 GIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHD-- 355
Query: 352 FHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDW 411
L +L+ D + + L +R + T E + + + A+ +RDALAK +Y+ LF+W
Sbjct: 356 -PLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNW 414
Query: 412 LVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQ 471
+VD +N ++ + IGVLDIYGFE+F++NSFEQFCIN+ NEKLQQ FN HVFK+EQ
Sbjct: 415 IVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQ 474
Query: 472 EEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTF-K 530
EEY KE+I W+ I+F DNQ ++LIE K G ++ LLDE C PK + +T+AQKLY T
Sbjct: 475 EEYMKEQIPWTLIDFYDNQPCINLIEAKMG-VLDLLDEECKMPKGSDDTWAQKLYNTHLN 533
Query: 531 SNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASK-CPFVSGLF 589
F KP+LS +F I H+A +V Y + FL+KNKD V E +L +SK + LF
Sbjct: 534 KCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELF 593
Query: 590 PPLPEESS---------------------------KSSKFSSIGSRFKLQLQSLMETLNS 622
+ S ++G +F+ L LMETLN+
Sbjct: 594 QDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNA 653
Query: 623 TEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGV 682
T PHY+RC+KPN+ P F+ +QQLR GVLE IRIS AG+P+R T+ EF R+ V
Sbjct: 654 TTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRV 713
Query: 683 LAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKVFLRAGQMAELDARRAEVLGNAAR 740
L D D K C+ +L+K+ L YQ GKTK+F RAGQ+A L+ RA+ L A
Sbjct: 714 LMKQK-DVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACI 772
Query: 741 IIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLRREAAALKIQKNFHSYTAR 800
IQ+ IR ++ RK+++ +R+AAI +Q Y RG A LRR AA+ IQK Y R
Sbjct: 773 RIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVR 832
Query: 801 TSYLTARSSAIQLQTGLRAMVARNEFRFRKQTKAAIIIEAYLRRHTACSYYKSLKKAAVI 860
Y R + I LQ LR + RN+++ + +III+ ++R A +Y KA V
Sbjct: 833 KRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVY 892
Query: 861 TQCGWRRRVARRELRNLKMAARETGALKEAKDKLEKRVEELTWRLQFEKQL-------RT 913
QC +RR +A+REL+ LK+ AR K+ LE ++ +L ++ + +
Sbjct: 893 LQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMN 952
Query: 914 NLEEEKAQEIAKLQDALQAMQLQVEEANFRILKEQEAARKAIEEAPPIVKETPVIVHDTE 973
NLE + E KL+ ++ +++ EEA K +++E I +
Sbjct: 953 NLEITYSTETEKLRSDVERLRMSEEEA-----KNATNRVLSLQEE---------IAKLRK 998
Query: 974 KIESLTAEVDSLKALLLSERQSAE----EARKACMDAEVRNTELVKKLEDTEEKNQVIRQ 1029
++ E +++ + E E ++ + EL +++ D ++ +
Sbjct: 999 ELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETME 1058
Query: 1030 QAL 1032
+ L
Sbjct: 1059 KKL 1061
|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 | Back alignment and structure |
|---|
| >2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 | Back alignment and structure |
|---|
| >1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 | Back alignment and structure |
|---|
| >1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 | Back alignment and structure |
|---|
| >2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} Length = 419 | Back alignment and structure |
|---|
| >3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} Length = 386 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1509 | ||||
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 0.0 | |
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 4e-04 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 0.0 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 0.001 | |
| d1lkxa_ | 684 | c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli | 0.0 | |
| d1d0xa2 | 712 | c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain | 0.0 | |
| d1w7ja2 | 730 | c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick | 0.0 | |
| d1br2a2 | 710 | c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick | 0.0 | |
| d1w7ja1 | 58 | b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal d | 5e-04 |
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 806 bits (2082), Expect = 0.0
Identities = 292/776 (37%), Positives = 440/776 (56%), Gaps = 38/776 (4%)
Query: 41 NGQTVITNISKVFPKDTEA---PP--GGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYT 95
+ Q + + K+ + T A PP ++DM ++YL+E VL+NL +RY IYTY+
Sbjct: 9 DFQYLAVDRKKLMKEQTAAFMNPPKFEKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYS 68
Query: 96 GNILIAINPFQRLPHLYDTHMMEQYKGAQFGELSPHVFAIADVAYRAMINEGKSNSILVS 155
G IA+NP++RLP +Y ++ +Y+G + E+ PH+F++AD AY+ M+ + ++ S L++
Sbjct: 69 GLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLIT 127
Query: 156 GESGAGKTETTKMLMRYLAYLGG--------RSGVEGRTVEQQVLESNPVLEAFGNAKTV 207
GESGAGKTE TK ++ YLA + S + ++E Q++++NPVLEA+GNAKT
Sbjct: 128 GESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTT 187
Query: 208 RNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCA-APPE 266
RNNNSSRFGKF+ + F G+I+GA + TYLLE+SRV ERNYH FY +C+ A PE
Sbjct: 188 RNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAIPE 247
Query: 267 VREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAI 326
+ + + + C +D +DD EE+ A DI+G ++EE+ ++F+ A+I
Sbjct: 248 LNDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASI 307
Query: 327 LHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITR 386
LH+G ++F + + + A L +A L AL+ + E++T+
Sbjct: 308 LHMGEMKFKQRPREEQAESDGTA---EAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTK 364
Query: 387 TLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSF 446
+ V S ALAK++Y R+F+WLV ++N ++ IGVLDI GFE F NSF
Sbjct: 365 GQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSF 424
Query: 447 EQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIAL 506
EQ CIN+TNE+LQQ FN H+F +EQEEY KE I W +I+F + + + +KP GI+++
Sbjct: 425 EQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEKPMGILSI 484
Query: 507 LDEACMFPKSTHETFAQKLYQTFKSNKRFI-------KPKLSRTSFTISHYAGEVTYLAD 559
L+E CMFPK+ ++F KLYQ R +P F + HYAG V Y
Sbjct: 485 LEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSIT 544
Query: 560 LFLDKNKDYVVAEHQVLLTASKCPFVSGLFPPLPEES-------SKSSKFSSIGSRFKLQ 612
+L+KNKD + LL ASK P V+ LF E + KSS F +I + +
Sbjct: 545 GWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRES 604
Query: 613 LQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRT 672
L LM+ L ST PH++RC+ PN +P + + ++ QL+C GVLE IRI G+P+R
Sbjct: 605 LNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLI 664
Query: 673 FYEFLHRFGVLAPDVL-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDA 729
+ EF R+ +LAP+ + G D K EKIL + + Y++G TKVF +AG + L+
Sbjct: 665 YSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEE 724
Query: 730 RRAEVLGNAARIIQRQIRTYIARKEFIALRK---AAIVLQSYWRGILACKLYEQLR 782
R E L + Q IR Y+ RK + L+ V+Q R L + ++ +
Sbjct: 725 MRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWWK 780
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 | Back information, alignment and structure |
|---|
| >d1w7ja1 b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 58 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1509 | |||
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 100.0 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1d0xa2 | 712 | Myosin S1, motor domain {Dictyostelium discoideum | 100.0 | |
| d1br2a2 | 710 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1lkxa_ | 684 | Myosin S1, motor domain {Dictyostelium discoideum, | 100.0 | |
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 97.94 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 97.9 | |
| d1w7ja1 | 58 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 97.7 | |
| d2mysa1 | 46 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 97.01 | |
| d1br2a1 | 46 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 97.0 | |
| d1kk8a1 | 48 | Myosin S1 fragment, N-terminal domain {Bay scallop | 96.72 | |
| d1iqpa2 | 231 | Replication factor C {Archaeon Pyrococcus furiosus | 93.4 | |
| d1m7ga_ | 208 | Adenosine-5'phosphosulfate kinase (APS kinase) {Fu | 91.55 | |
| d1sxjd2 | 237 | Replication factor C2 {Baker's yeast (Saccharomyce | 91.32 | |
| d1njfa_ | 239 | delta prime subunit of DNA polymerase III, N-domai | 91.02 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 89.72 | |
| d1rz3a_ | 198 | Hypothetical protein rbstp0775 {Bacillus stearothe | 88.12 | |
| d1sxjb2 | 224 | Replication factor C4 {Baker's yeast (Saccharomyce | 88.08 | |
| d1m8pa3 | 183 | ATP sulfurylase C-terminal domain {Fungus (Penicil | 87.54 | |
| d1g6oa_ | 323 | Hexameric traffic ATPase, HP0525 {Helicobacter pyl | 86.95 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 86.64 | |
| d2i3ba1 | 189 | Cancer-related NTPase, C1orf57 {Human (Homo sapien | 85.39 | |
| d1qhxa_ | 178 | Chloramphenicol phosphotransferase {Streptomyces v | 84.58 | |
| d1khta_ | 190 | Adenylate kinase {Archaeon Methanococcus voltae [T | 83.59 | |
| d1sxjc2 | 227 | Replication factor C3 {Baker's yeast (Saccharomyce | 83.27 | |
| d1rkba_ | 173 | Adenylate kinase {Human (Homo sapiens), isoenzyme | 83.16 | |
| d1ye8a1 | 178 | Hypothetical kinase-like protein Aq_1292 {Aquifex | 82.84 | |
| d1knqa_ | 171 | Gluconate kinase {Escherichia coli [TaxId: 562]} | 82.79 | |
| d1x6va3 | 195 | Adenosine-5'phosphosulfate kinase (APS kinase) {Hu | 82.5 | |
| d1lvga_ | 190 | Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 | 81.91 | |
| d1ly1a_ | 152 | Polynucleotide kinase, kinase domain {Bacteriophag | 81.87 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 81.25 | |
| d1qf9a_ | 194 | UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 | 81.24 |
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]
Probab=100.00 E-value=0 Score=1660.33 Aligned_cols=726 Identities=38% Similarity=0.664 Sum_probs=672.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf 65579999999996843368799937799999997501862123587189857898898998889999811167688892
Q 000440 51 KVFPKDTEAPPGGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELSP 130 (1509)
Q Consensus 51 ~~~~~~~~~~~~~~~Dl~~L~~l~e~~vl~~L~~R~~~~~iYT~~G~~LiavNP~~~l~~~y~~~~~~~y~~~~~~~~~P 130 (1509)
..+++||+ ..+++|||+.|++||||+|||||+.||.+++||||+|++|||||||+.+| +|++++++.|+++..+++||
T Consensus 27 ~~~~~np~-~~d~veDl~~L~~lnE~~vL~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~-ly~~~~~~~y~~~~~~~~pP 104 (794)
T d2mysa2 27 KPFDMNPP-KYDKIEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLP-VYNPKVVLAYRGKKRQEAPP 104 (794)
T ss_dssp SCCCCCCT-TSSSCSBGGGCSCCCHHHHHHHHHHTTTTTCCEEECSSCEEEECCSSCCG-GGCTTHHHHTTTCCTTSSCS
T ss_pred CCCCCCCC-CCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCC-CCCHHHHHHHCCCCCCCCCC
T ss_conf 88789986-33476310078879889999999999768996245788899978998899-99999999970898899998
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCC--------CCCCHHHHHHHHCHHHHHHC
Q ss_conf 3888999999999844998189853888885469999999999883388887--------77668889972006998605
Q 000440 131 HVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV--------EGRTVEQQVLESNPVLEAFG 202 (1509)
Q Consensus 131 Hifaia~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~k~~~~yla~~~~~~~~--------~~~~i~~~il~snpilEaFG 202 (1509)
||||||+.||+.|...++||||||||||||||||++|++|+||+++++++.. ....|+++|+++||||||||
T Consensus 105 HifaiA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il~yL~~~~~~~~~~~~~~~~~~~~~i~~~i~~~npiLEAFG 184 (794)
T d2mysa2 105 HIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFG 184 (794)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEEEECTTSCHHHHHHHHHHHHHHHTCCCC-----------CCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 08999999999998749980799971798878999999999999870778775311135556749999997626999854
Q ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCC-CCHHHHHHCCCC-CCCCCC
Q ss_conf 754457889897630799996389961220342100357532324899862013300346-995678623999-999783
Q 000440 203 NAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLG-DPKSFH 280 (1509)
Q Consensus 203 nAkT~~N~nSSRfgk~~~l~f~~~~~i~ga~i~~yLLEksRvv~q~~~ErnfHiFYql~~-~~~~~~~~l~l~-~~~~~~ 280 (1509)
||||++|+||||||||++|+||.+|.|+||+|.+|||||||||+|++|||||||||||++ +++++++.+.|. ++.+|+
T Consensus 185 NAkT~~N~NSSRFgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g~~~~~~~~~~l~~~~~~y~ 264 (794)
T d2mysa2 185 NAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYH 264 (794)
T ss_dssp EECCSSCSSEECSEEEEEEEECSSSSEEECCEEEECCCGGGGTCCCTTCCCBHHHHHHTTCSSHHHHHHHTCCSCGGGCG
T ss_pred CCCCCCCCCHHHHHEEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCHHHHH
T ss_conf 87556668720111013667779997866899998537853773476544199999998399999999862689877723
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 24699954458989299999998202134679899999999999999633768982688885210471026899999986
Q 000440 281 YLNQSNCYALDGVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360 (1509)
Q Consensus 281 yl~~~~~~~~~~~dd~~~f~~~~~al~~lg~~~~~~~~i~~ilaaiLhlGni~f~~~~~~~~~~~~~~~~~~~l~~~a~L 360 (1509)
||++|. ..++++||+++|..+..||..|||+++++..||+|||||||||||+|.+..+.+.+.+.+.. .++.+|.|
T Consensus 265 yl~~~~-~~~~~~~d~~~f~~~~~al~~lg~s~~e~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~~---~~~~~a~L 340 (794)
T d2mysa2 265 YVSEGE-ITVPSIDDQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTE---VADKAAYL 340 (794)
T ss_dssp GGCSSC-CCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSCCEEESCSS---HHHHHHHH
T ss_pred HCCCCC-CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHH---HHHHHHHH
T ss_conf 317998-04699776999999999999809999999999998888751011167524774212236637---99999988
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 29999999999833431127844741599878977377899999999998999872100366899872876520466667
Q 000440 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFES 440 (1509)
Q Consensus 361 Lgv~~~~l~~~l~~~~~~~~~~~~~~~l~~~~a~~~rdalak~lY~~lF~wiv~~iN~~l~~~~~~~~~IgiLDi~GFE~ 440 (1509)
|||+.++|.++|+++.+.++++.+++++++++|.++||+|||+||++||+|||.+||.++.+......+||||||||||+
T Consensus 341 Lgi~~~~L~~~L~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~~~~~~IgILDifGFE~ 420 (794)
T d2mysa2 341 MGLNSAELLKALCYPRVGVGNEAVTKGETVSEVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQPRQYFIGVLDIAGFEI 420 (794)
T ss_dssp HTCCHHHHHHHHHSCBCCCSSSCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCCCEEEEEEEEECCCC
T ss_pred HCCCHHHHHCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC
T ss_conf 19798895304105689833665046388999988999899999999999999876632066777651789853255554
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 77897778776442268887788976654597852128752124435628577752047563100220000699997599
Q 000440 441 FKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHET 520 (1509)
Q Consensus 441 f~~NsfeQlciNyaNEklq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~idli~~~~~Gil~lLdee~~~p~~td~~ 520 (1509)
|+.||||||||||||||||++|++++|+.||++|.+|||+|..|+|.||.+++++++.+|.|||++|||||++|+|||++
T Consensus 421 f~~NsfEQLcINyaNEkLQq~f~~~~F~~Eq~~Y~~EgI~~~~i~~~~n~~~~~~l~~kp~Gil~lLdee~~~~~~td~~ 500 (794)
T d2mysa2 421 FDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILEEECMFPKATDTS 500 (794)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCSTHHHHHHHHHHHSTTSHHHHHHHHTTCTTCCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHH
T ss_conf 45663889999999999999999999998999997548776567777987999999848532799998861476651889
Q ss_pred HHHHHHHHH-CCCCCCCCCCC----CCCCEEEEEECCCEEEECCCHHHHCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCC
Q ss_conf 999999880-59998447898----9986289910551265210044420202049999999507803453019999767
Q 000440 521 FAQKLYQTF-KSNKRFIKPKL----SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGLFPPLPEE 595 (1509)
Q Consensus 521 ~~~kl~~~~-~~~~~~~~p~~----~~~~F~i~Hyag~V~Y~~~~flekN~d~~~~~~~~ll~~S~~~~i~~lf~~~~~~ 595 (1509)
|++|++.+| ++++.|.+|.. .+..|+|+||||+|+|+++||++||+|.++++++++++.|++++++.||+.....
T Consensus 501 f~~kl~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~ 580 (794)
T d2mysa2 501 FKNKLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYGGE 580 (794)
T ss_dssp HHHHHHHHHBTTBSSEECCCCC---CCCSEEEECSSCEEEECCSSHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSCC---
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEHHCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf 99999987357885636887567878871689830763604412657755584437999999867988999866402443
Q ss_pred CC----------CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHC
Q ss_conf 67----------98888651487899899999987226982687048898889887872569987401046677964202
Q 000440 596 SS----------KSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCA 665 (1509)
Q Consensus 596 ~~----------~~~~~~tv~~~f~~sl~~L~~~l~~t~~h~irCIkPN~~k~~~~fd~~~v~~QLr~~gvle~i~i~~~ 665 (1509)
+. +++++.||+++|+.||+.||++|++|+||||||||||+.+.|+.||...|++||||+||||++||++.
T Consensus 581 ~~~~~~~~~~~~~~~~~~Tv~~~fr~sL~~L~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvLE~vri~r~ 660 (794)
T d2mysa2 581 AEGGGGKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRK 660 (794)
T ss_dssp -----------------CCSHHHHHHHHHHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHSHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHC
T ss_conf 33566776877778752408999999999999987568986888646886558764356999999986278999999966
Q ss_pred CCCCCCCHHHHHHHHHCCCCCCCC--CCCCCHHHHHHHHHHCCCC--CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
Q ss_conf 797445748899975200679778--8975199999999760988--620154112541242001235676430236899
Q 000440 666 GYPTRRTFYEFLHRFGVLAPDVLD--GNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARI 741 (1509)
Q Consensus 666 gyp~r~~~~~F~~ry~~l~~~~~~--~~~~~~~~~~~il~~~~~~--~~~iGkTkVFlr~~~~~~LE~~r~~~l~~aa~~ 741 (1509)
|||+|++|.+|+.||++|+|.... ...|.++.|+.|+..++++ .|++|+||||||++++..||.+|.+.+.++++.
T Consensus 661 Gyp~R~~~~eF~~RY~~L~~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~iGkTKVFlr~~~~~~LE~~r~~~l~~~~~~ 740 (794)
T d2mysa2 661 GFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTKVFFKAGLLGLLEEMRDDKLAEIITA 740 (794)
T ss_dssp SCCCEEEHHHHHHHHGGGTTTC------CCTTHHHHHHTTSSSCCSSSEEEETTEEEECTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHH
T ss_conf 89863649999999998583424455668999999999996697813587179759867439999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 99875234899989999---977476420011013557778877
Q 000440 742 IQRQIRTYIARKEFIAL---RKAAIVLQSYWRGILACKLYEQLR 782 (1509)
Q Consensus 742 IQ~~~R~~l~Rk~~~~~---r~a~i~iQ~~~Rg~laRr~~~~~r 782 (1509)
||++||||++|++|.++ +.|++.||++||||++||.|.|+|
T Consensus 741 IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~~~~r 784 (794)
T d2mysa2 741 TQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPWMK 784 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 99999999999999999999999999999999999982369999
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja1 b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d2mysa1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
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| >d1br2a1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
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| >d1kk8a1 b.34.3.1 (A:29-76) Myosin S1 fragment, N-terminal domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
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| >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
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| >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
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| >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
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| >d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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| >d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
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| >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
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| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
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| >d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} | Back information, alignment and structure |
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| >d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
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| >d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
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| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
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| >d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
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