Citrus Sinensis ID: 000467
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1476 | 2.2.26 [Sep-21-2011] | |||||||
| P70569 | 1846 | Unconventional myosin-Vb | yes | no | 0.653 | 0.522 | 0.366 | 1e-176 | |
| P21271 | 1818 | Unconventional myosin-Vb | yes | no | 0.647 | 0.525 | 0.364 | 1e-174 | |
| Q9ULV0 | 1848 | Unconventional myosin-Vb | no | no | 0.663 | 0.530 | 0.362 | 1e-171 | |
| Q02440 | 1829 | Unconventional myosin-Va | yes | no | 0.657 | 0.530 | 0.349 | 1e-171 | |
| Q99104 | 1853 | Unconventional myosin-Va | no | no | 0.642 | 0.512 | 0.360 | 1e-171 | |
| Q9Y4I1 | 1855 | Unconventional myosin-Va | yes | no | 0.638 | 0.508 | 0.359 | 1e-170 | |
| Q9QYF3 | 1828 | Unconventional myosin-Va | no | no | 0.710 | 0.573 | 0.351 | 1e-167 | |
| Q875Q8 | 1554 | Myosin-2 OS=Lachancea klu | N/A | no | 0.656 | 0.623 | 0.343 | 1e-161 | |
| O94477 | 1516 | Myosin-52 OS=Schizosaccha | yes | no | 0.565 | 0.550 | 0.366 | 1e-160 | |
| Q876G9 | 1568 | Myosin-2 OS=Saccharomyces | N/A | no | 0.771 | 0.725 | 0.325 | 1e-159 |
| >sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1 | Back alignment and function desciption |
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Score = 619 bits (1595), Expect = e-176, Method: Compositional matrix adjust.
Identities = 400/1091 (36%), Positives = 595/1091 (54%), Gaps = 126/1091 (11%)
Query: 7 SKVWVEDKDLAWVAAEVVSD--SVGRHVQVLTATGKKFGVVFFFFSIILQVLAAPERVFL 64
++VW+ D D W +AE+ D +Q+ + I +Q P FL
Sbjct: 11 TRVWIPDPDEVWRSAELTKDYKDGDESLQLRLEDD-----TILDYPIDVQNNQVP---FL 62
Query: 65 RATDDDEEHGGVDDMTKLTYLNEPGVLYNLERRY-ALNDIYTYTGSILIAVNPFTKLPHL 123
R D G +D+T L++L+EP VL+NL+ R+ N IYTY G +L+A+NP+ +LP +
Sbjct: 63 RNPDI---LVGENDLTALSHLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLP-I 118
Query: 124 YNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQ 183
Y ++ Y G G++ PH+FAVA+ +Y+ M + ++QSI+VSGESGAGKT + K M+
Sbjct: 119 YGQDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMR 178
Query: 184 YLTFVGGRAAGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISG 243
Y VGG A+ D N+E++VL S+P++EA GNA+T RNDNSSRFGK++EI FD I G
Sbjct: 179 YFATVGGSAS--DTNIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKKYHIIG 236
Query: 244 AAIRTYLLERSRVVQITDPERNYHCFYQLCASGRDAE--KYKLDHPSHFHYLNQSKVYEL 301
A +RTYLLE+SRVV D ERNYH FYQLCA+ E + L F Y +
Sbjct: 237 ANMRTYLLEKSRVVFQADDERNYHIFYQLCAAASLPEFKELALTCAEDFFYTAHGGNTTI 296
Query: 302 DGVSSAEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKS 361
+GV AE++ KT++A+ ++G+ Q +IF+ +A+ILHLG++E ++ DS I Q
Sbjct: 297 EGVDDAEDFEKTRQALTLLGVRESHQISIFKIIASILHLGSVEIQAERDGDSCSISPQDE 356
Query: 362 SFHLQMAADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFD 421
HL L + + + LC R + T + +K + V +R+ALAK +Y++LF
Sbjct: 357 --HLSNFCRLLGIEHSQMEHWLCHRKLVTTSETYVKTMSLQQVVNARNALAKHIYAQLFS 414
Query: 422 WLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKME 481
W+VE IN+++ + IGVLDIYGFE+F+ NSFEQFCIN+ANEKLQQ FN HVFK+E
Sbjct: 415 WIVEHINKALQTSLKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLE 474
Query: 482 QEEYRREEINWSYIEFIDNQ----------DVLDLIE----------------------- 508
QEEY +E+I W+ I+F DNQ +LDL++
Sbjct: 475 QEEYMKEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYERHSN 534
Query: 509 ---------------------KVTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLF-- 545
KV Y ++ FL+KNRD V E N+L +SK P VA LF
Sbjct: 535 SQHFQKPRMSNTAFIVIHFADKVEYLSDGFLEKNRDTVYEEQINILKASKFPLVADLFRD 594
Query: 546 -----PVLSEESSRSSYKFS-----------------SVASRFKQQLQALMETLNSTEPH 583
P + SRSS K + SV +F+ L LMETLN+T PH
Sbjct: 595 DEDSVPATNTAKSRSSSKINVRSSRPLMKAPNKEHKKSVGYQFRTSLNLLMETLNATTPH 654
Query: 584 YIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALE 643
Y+RC+KPN P F+ + QLR GVLE +RIS AGYP+R TY DF +R+ +L +
Sbjct: 655 YVRCIKPNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLMKK 714
Query: 644 F-MDESYEEKALTEKILRKL--KLENFQLGRTKVFLRAGQIGILDSRRAEVLDSAARCIQ 700
+ + ++K + + +L L + FQ GRTK+F RAGQ+ L+ RA+ A IQ
Sbjct: 715 RELANTTDKKNICKSVLESLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFREATIMIQ 774
Query: 701 HRWRTFIAHRNFVSIRAAAFVLQAQCRGCLARKLYGVKRETAAAISLQKYVRRWLSRHAF 760
R ++ + +RAA LQ CRG LAR+L R T AAI QK R +R A+
Sbjct: 775 KTVRGWLQRVKYRRLRAATLTLQRFCRGYLARRLTEHLRRTRAAIVFQKQYRMLKARRAY 834
Query: 761 LKLSLAAIVIQSNIRGFSIRERFLHRKRHKAATVIQACWRMCKFRSAFQHHQTSIIAIQC 820
++ AA++IQS RG ++ AT+IQ R R FQ + + I IQC
Sbjct: 835 CRVRRAAVIIQSYTRGHVCTQKLPPVLTEHKATIIQKYARGWMARRHFQRQRDAAIVIQC 894
Query: 821 RWRQKLAKRELRRLKQVANEAGALRLAKNKLERQLEDLTWRVQLEKKLRVSTEEAKSV-- 878
+R+ A++ L+ LK A A L+ +E ++ VQL++K+ +E K++
Sbjct: 895 AFRRLKARQALKALKIEARSAEHLKRLNVGMENKV------VQLQRKIDDQNKEFKTLSE 948
Query: 879 EISKLQKL--LESLNLELDAAKLATINECNKNAMLQNQLELSLK---EKSALERELVAMA 933
++S + +E L+ + A+ E + + LQ +++ SL+ +K+ ER ++ A
Sbjct: 949 QLSAVTSTHAMEVEKLKKELARYQQNQEADPSLQLQEEVQ-SLRTELQKAHSERRVLEDA 1007
Query: 934 EIRKENAVLKSSLDSLEKKNSTLELELIKAQKEN-NNTIEKLREVEQKCSSLQQNM---Q 989
R EN L+ + LE +N+ L+K +KE+ N+ I + + E SS+++N+ +
Sbjct: 1008 HNR-ENGELRKRVADLEHENA-----LLKDEKEHLNHQILRQSKAESSQSSVEENLLIKK 1061
Query: 990 SLEEKLSHLED 1000
LEE+ S ++
Sbjct: 1062 ELEEERSRYQN 1072
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May be involved in vesicular trafficking via its association with the CART complex. The CART complex is necessary for efficient transferrin receptor recycling but not for EGFR degradation (By similarity). Required in a complex with RAB11A and RAB11FIP2 for the transport of NPC1L1 to the plasma membrane (By similarity). Together with RAB11A participates in CFTR trafficking to the plasma membrane and TF (transferrin) recycling in nonpolarized cells (By similarity). Together with RAB11A and RAB8A participates in epithelial cell polarization (By similarity). Together with RAB25 regulates transcytosis. Rattus norvegicus (taxid: 10116) |
| >sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3 | Back alignment and function description |
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| >sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1 | Back alignment and function description |
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| >sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1 | Back alignment and function description |
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| >sp|Q875Q8|MYO2_LACK1 Myosin-2 OS=Lachancea kluyveri (strain ATCC 58438 / CBS 3082 / CCRC 21498 / NBRC 1685 / JCM 7257 / NCYC 543 / NRRL Y-12651) GN=MYO2 PE=3 SV=1 | Back alignment and function description |
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| >sp|O94477|MYO52_SCHPO Myosin-52 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=myo52 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q876G9|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1476 | ||||||
| 255550191 | 1518 | myosin XI, putative [Ricinus communis] g | 0.987 | 0.959 | 0.793 | 0.0 | |
| 225429694 | 1517 | PREDICTED: myosin-H heavy chain-like [Vi | 0.989 | 0.963 | 0.787 | 0.0 | |
| 449452933 | 1515 | PREDICTED: myosin-H heavy chain-like [Cu | 0.989 | 0.963 | 0.766 | 0.0 | |
| 356514749 | 1521 | PREDICTED: myosin-H heavy chain-like [Gl | 0.987 | 0.958 | 0.762 | 0.0 | |
| 356554104 | 1588 | PREDICTED: myosin-H heavy chain-like [Gl | 0.988 | 0.918 | 0.760 | 0.0 | |
| 356509843 | 1519 | PREDICTED: myosin-Va-like [Glycine max] | 0.989 | 0.961 | 0.761 | 0.0 | |
| 297798622 | 1522 | hypothetical protein ARALYDRAFT_913100 [ | 0.979 | 0.950 | 0.725 | 0.0 | |
| 42567348 | 1522 | putative myosin [Arabidopsis thaliana] g | 0.979 | 0.950 | 0.724 | 0.0 | |
| 334187115 | 1503 | putative myosin [Arabidopsis thaliana] g | 0.966 | 0.949 | 0.712 | 0.0 | |
| 334187117 | 1492 | putative myosin [Arabidopsis thaliana] g | 0.959 | 0.949 | 0.708 | 0.0 |
| >gi|255550191|ref|XP_002516146.1| myosin XI, putative [Ricinus communis] gi|223544632|gb|EEF46148.1| myosin XI, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 2443 bits (6332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1215/1532 (79%), Positives = 1335/1532 (87%), Gaps = 75/1532 (4%)
Query: 2 NLRKGSKVWVEDKDLAWVAAEVVSDSVGRHVQVLTATGKKFGVVFFFFSIILQVLAAPER 61
NLRKGSKVWVEDK+ AWVAAEV +D +G+ VQV+TA+ +K +VLA P++
Sbjct: 3 NLRKGSKVWVEDKNFAWVAAEV-TDFIGKQVQVITASSRK------------KVLAYPDK 49
Query: 62 VFLRATDDDEEHGGVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLP 121
+FLR DD+E+HGGVDDMTKLTYL+EPGVL+NLERRYALNDIYTYTGSILIAVNPFTKLP
Sbjct: 50 LFLR-DDDEEDHGGVDDMTKLTYLHEPGVLFNLERRYALNDIYTYTGSILIAVNPFTKLP 108
Query: 122 HLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLI 181
HLYNVHMMEQYKGAPFGELSPHVFAVADASYRAM+SE +SQSILVSGESGAGKTETTKLI
Sbjct: 109 HLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMMSEGRSQSILVSGESGAGKTETTKLI 168
Query: 182 MQYLTFVGGRAAGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRI 241
MQYLT+VGGRAA DDR VEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFD +GRI
Sbjct: 169 MQYLTYVGGRAADDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDAHGRI 228
Query: 242 SGAAIRTYLLERSRVVQITDPERNYHCFYQLCASGRDAEKYKLDHPSHFHYLNQSKVYEL 301
SGAAIRTYLLERSRVVQITDPERNYHCFYQLCASGRDAE YKLDHPSHFHYLNQSK+YEL
Sbjct: 229 SGAAIRTYLLERSRVVQITDPERNYHCFYQLCASGRDAENYKLDHPSHFHYLNQSKIYEL 288
Query: 302 DGVSSAEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKS 361
+GVS+AEEY+KT+RAMDIVGISHE+QEAIFRTLAAILHLGNIEFSPGKEHDSS +KDQ+S
Sbjct: 289 EGVSNAEEYIKTRRAMDIVGISHENQEAIFRTLAAILHLGNIEFSPGKEHDSSTVKDQRS 348
Query: 362 SFHLQMAADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFD 421
SFHLQMAA LFMCDVNLLLATLCTRTIQTREG+I+K LDCNAAVASRDALAKTVY++LFD
Sbjct: 349 SFHLQMAAALFMCDVNLLLATLCTRTIQTREGNIVKYLDCNAAVASRDALAKTVYAKLFD 408
Query: 422 WLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKME 481
WLV+KINRSVGQD SQ+QIGVLDIYGFE FKHNSFEQFCINFANEKLQQHFNEHVFKME
Sbjct: 409 WLVDKINRSVGQDPMSQIQIGVLDIYGFECFKHNSFEQFCINFANEKLQQHFNEHVFKME 468
Query: 482 QEEYRREEINWSYIEFIDNQDVLDLIEKV--------------------TYQTNTF---- 517
QEEYR+EEINWSYI+FIDNQDVLDLIEK T+ T F
Sbjct: 469 QEEYRKEEINWSYIDFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTNETFSTKLFQNLG 528
Query: 518 -------------------------------LDKNRDYVVVEHCNLLSSSKCPFVAGLFP 546
LDKNRDY+VVEHCNLLSSSKC FVAGLFP
Sbjct: 529 THPRLEKTKFSETDFTVSHYAGKVVYQTETFLDKNRDYIVVEHCNLLSSSKCCFVAGLFP 588
Query: 547 VLSEESSRSSYKFSSVASRFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILH 606
EESSRSSYKFSSV+SRFKQQLQALMETLNST+PHYIRCVKPNSLNRPQKFEN SILH
Sbjct: 589 SPPEESSRSSYKFSSVSSRFKQQLQALMETLNSTQPHYIRCVKPNSLNRPQKFENKSILH 648
Query: 607 QLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDES--YEEKALTEKILRKLKL 664
QLRCGGVLEAVRISLAGYPTRRTYS+FVDRFGLL E++D S Y+EKA TEKIL++LKL
Sbjct: 649 QLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLLTPEYLDGSSNYDEKAWTEKILQELKL 708
Query: 665 ENFQLGRTKVFLRAGQIGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVLQA 724
ENFQLGRTKVFLRAGQIG+LDSRRAEVLD AA+ IQ + RTFIA +NF+S R AA +QA
Sbjct: 709 ENFQLGRTKVFLRAGQIGVLDSRRAEVLDDAAKRIQRQLRTFIAKKNFISARTAAISVQA 768
Query: 725 QCRGCLARKLYGVKRETAAAISLQKYVRRWLSRHAFLKLSLAAIVIQSNIRGFSIRERFL 784
CRGCLARK+Y K+ETAA++S+QKY+R+WL R A+ KL AAIV+QSNIRGF R+RFL
Sbjct: 769 YCRGCLARKMYAEKQETAASVSIQKYIRKWLLRRAYSKLLSAAIVVQSNIRGFLTRQRFL 828
Query: 785 HRKRHKAATVIQACWRMCKFRSAFQHHQTSIIAIQCRWRQKLAKRELRRLKQVANEAGAL 844
+ KRH+AAT IQA WR+CKFRSA + HQTSI+A+QCRWRQKLAKRE RRLKQ ANE GAL
Sbjct: 829 NGKRHRAATTIQARWRLCKFRSAVRRHQTSIVALQCRWRQKLAKREFRRLKQEANETGAL 888
Query: 845 RLAKNKLERQLEDLTWRVQLEKKLRVSTEEAKSVEISKLQKLLESLNLELDAAKLATINE 904
RLAKNKLE+QLEDL WR+ LEK+LR+S EEAKS+EIS+LQK LESL+LELDAAKLATINE
Sbjct: 889 RLAKNKLEKQLEDLAWRLNLEKRLRISNEEAKSIEISELQKSLESLSLELDAAKLATINE 948
Query: 905 CNKNAMLQNQLELSLKEKSALERELVAMAEIRKENAVLKSSLDSLEKKNSTLELELIKAQ 964
NKNAML N+LELS+KEKSALEREL+A+AE+RKENA LK SLDSLEK+NS LELELIKAQ
Sbjct: 949 FNKNAMLLNRLELSMKEKSALERELIAIAELRKENAFLKGSLDSLEKQNSALELELIKAQ 1008
Query: 965 KENNNTIEKLREVEQKCSSLQQNMQSLEEKLSHLEDENHVLRQKALSVSPKSNRFGLPKA 1024
K++N+TI K +E E+KCS LQQNMQSL EK+SHLEDENH+LRQKALSVSPKSNR L KA
Sbjct: 1009 KDSNDTIAKFKETEEKCSQLQQNMQSLGEKVSHLEDENHILRQKALSVSPKSNRSSLVKA 1068
Query: 1025 FSDKYTGSLSLPHVDRKPIFESPTPSKLITPFSHGLSESRRTKLTAERYQENLEFLSRCI 1084
FS+KY+G L+L DRKP+FESPTPSKLI PFSHGLSE RR KLTAER+QEN EFLSRCI
Sbjct: 1069 FSEKYSGVLALAPSDRKPVFESPTPSKLI-PFSHGLSEPRRPKLTAERHQENYEFLSRCI 1127
Query: 1085 KENLGFNNGKPVAACIIYKSLVHWQAFESERTAIFDYIIEGINDVLKVGDENSILPYWLS 1144
KE GF NGKP+AACIIY+ L+HW AFESERT IFDYIIEGIN+VLKVGDE ILPYWLS
Sbjct: 1128 KEESGFINGKPLAACIIYRCLLHWHAFESERTVIFDYIIEGINEVLKVGDEAVILPYWLS 1187
Query: 1145 NASALLCLLQRSLRSNGLLTANTPRTTGSTGLPGRIAYGIKSPFKYIGFGDGIPHVEARY 1204
NASALLCLLQR+LRSNG L A + +T S+ LPGR+ +G+KSPFKYIG+ DG+ HVEARY
Sbjct: 1188 NASALLCLLQRNLRSNGFLNAASQFSTPSS-LPGRVIHGLKSPFKYIGYEDGLSHVEARY 1246
Query: 1205 PAILFKQQLTACVEKIFGLIRDNLKKELSPLLGSCIQVPKTARVHAGKLSRSP-GVQQQS 1263
PAILFKQQLTACVEKIFGLIRDNLKKELSPLLG CIQ PK R +AGK SRSP GV QQ+
Sbjct: 1247 PAILFKQQLTACVEKIFGLIRDNLKKELSPLLGLCIQAPKALR-YAGKSSRSPGGVPQQA 1305
Query: 1264 HTSQWDNIIKFLDSLMRRLRENHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNG 1323
SQW++IIKFLDS + RLR NHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNG
Sbjct: 1306 PNSQWESIIKFLDSFIGRLRANHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNG 1365
Query: 1324 EYVKSGLAELEKWIVSAKEEFAGTSWHELNYIRQAVGFLVIHQKRKKSLDEIRQDLCPAL 1383
EYVKSGLAELEKWIV A EE+AGTSWHEL YIRQAVGFLVIHQKRKKSL++I QDLCPAL
Sbjct: 1366 EYVKSGLAELEKWIVGATEEYAGTSWHELKYIRQAVGFLVIHQKRKKSLEDIMQDLCPAL 1425
Query: 1384 TVRQIYRICTMYWDDKYGTQSVSNEVVAQMREILNKDNHNLSSNSFLLDDDLSIPFSTED 1443
TVRQIYRI TMYWDDKYGTQSVSNEVVAQMRE+L+KDN N +SNSFLLDDDLSIPFSTED
Sbjct: 1426 TVRQIYRISTMYWDDKYGTQSVSNEVVAQMREMLSKDNQNSTSNSFLLDDDLSIPFSTED 1485
Query: 1444 IDMAIPVTDPADTDIPAFLSEYPCAQFLVQHE 1475
IDMAIP DP+D ++P FLSEYP AQFLV H+
Sbjct: 1486 IDMAIPAIDPSDIELPKFLSEYPPAQFLVLHQ 1517
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429694|ref|XP_002281615.1| PREDICTED: myosin-H heavy chain-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449452933|ref|XP_004144213.1| PREDICTED: myosin-H heavy chain-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356514749|ref|XP_003526066.1| PREDICTED: myosin-H heavy chain-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356554104|ref|XP_003545389.1| PREDICTED: myosin-H heavy chain-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356509843|ref|XP_003523654.1| PREDICTED: myosin-Va-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297798622|ref|XP_002867195.1| hypothetical protein ARALYDRAFT_913100 [Arabidopsis lyrata subsp. lyrata] gi|297313031|gb|EFH43454.1| hypothetical protein ARALYDRAFT_913100 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|42567348|ref|NP_195046.3| putative myosin [Arabidopsis thaliana] gi|110737839|dbj|BAF00858.1| myosin - like protein [Arabidopsis thaliana] gi|332660788|gb|AEE86188.1| putative myosin [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|334187115|ref|NP_001190897.1| putative myosin [Arabidopsis thaliana] gi|332660789|gb|AEE86189.1| putative myosin [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|334187117|ref|NP_001190898.1| putative myosin [Arabidopsis thaliana] gi|332660790|gb|AEE86190.1| putative myosin [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1476 | ||||||
| TAIR|locus:2125929 | 1522 | XI-I [Arabidopsis thaliana (ta | 0.645 | 0.626 | 0.686 | 0.0 | |
| TAIR|locus:2149932 | 1545 | XIK [Arabidopsis thaliana (tax | 0.649 | 0.620 | 0.448 | 0.0 | |
| TAIR|locus:2199449 | 1529 | XIE [Arabidopsis thaliana (tax | 0.647 | 0.625 | 0.459 | 0.0 | |
| TAIR|locus:2025535 | 1538 | XIC [Arabidopsis thaliana (tax | 0.649 | 0.622 | 0.451 | 0.0 | |
| TAIR|locus:2007938 | 1520 | MYA1 "myosin 1" [Arabidopsis t | 0.665 | 0.646 | 0.431 | 0.0 | |
| TAIR|locus:2117768 | 1516 | XIH [Arabidopsis thaliana (tax | 0.641 | 0.624 | 0.411 | 0.0 | |
| TAIR|locus:2020270 | 1500 | XIB "myosin XI B" [Arabidopsis | 0.330 | 0.325 | 0.660 | 0.0 | |
| TAIR|locus:2197773 | 1730 | XIA "myosin XI A" [Arabidopsis | 0.329 | 0.281 | 0.649 | 0.0 | |
| TAIR|locus:2046570 | 1770 | XID "myosin XI D" [Arabidopsis | 0.329 | 0.275 | 0.647 | 0.0 | |
| TAIR|locus:2045198 | 1556 | XIF "myosin-like protein XIF" | 0.334 | 0.316 | 0.647 | 2.4e-278 |
| TAIR|locus:2125929 XI-I [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3357 (1186.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 663/966 (68%), Positives = 767/966 (79%)
Query: 509 KVTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLFPVLXXXXXXXXXXXXXXXXXXKQ 568
KVTYQT FLDKNRDY +VEHCNLLSSSKCPFVAG+FP KQ
Sbjct: 557 KVTYQTEAFLDKNRDYTIVEHCNLLSSSKCPFVAGIFPSAPEESTRSSYKFSSVSSRFKQ 616
Query: 569 QLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRR 628
QLQALMETL+ TEPHY+RCVKPNSLNRPQKFE+ S+LHQLRCGGVLEAVRISLAGYPTRR
Sbjct: 617 QLQALMETLSKTEPHYVRCVKPNSLNRPQKFESLSVLHQLRCGGVLEAVRISLAGYPTRR 676
Query: 629 TYSDFVDRFGLLALEFMDESYEEKALTEKILRKLKLENFQLGRTKVFLRAGQIGILDSRR 688
YSDFVDRFGLLA EFMDES +E+ALTEKIL KL L N+QLGRTKVFLRAGQIGILDSRR
Sbjct: 677 NYSDFVDRFGLLAPEFMDESNDEQALTEKILSKLGLGNYQLGRTKVFLRAGQIGILDSRR 736
Query: 689 AEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVLQAQCRGCLARKLYGVKRETAAAISLQ 748
AEVLD++AR IQ R RTF+ H+NF+S RA+A +QA CRGCL+R Y +R AAA+ +Q
Sbjct: 737 AEVLDASARLIQRRLRTFVTHQNFISARASAISIQAYCRGCLSRNAYATRRNAAAAVLVQ 796
Query: 749 KYVRRWLSRHAFLKLSLAAIVIQSNIRGFSIRERFLHRKRHKAATVIQACWRMCKFRSAF 808
K+VRRWLSR AF+KL AAIV+QS IR S R +F H+K H+AA++IQA WR+ KFRSAF
Sbjct: 797 KHVRRWLSRCAFVKLVSAAIVLQSCIRADSTRLKFSHQKEHRAASLIQAHWRIHKFRSAF 856
Query: 809 QHHQTSIIAIQCRWRQKLAKRELRRLKQVANEAGALRLAKNKLERQLEDLTWRVQLEKKL 868
+H Q+SIIAIQCRWRQKLAKRE R+LKQVANEAGALRLAK KLE++LEDL WR+QLEK+L
Sbjct: 857 RHRQSSIIAIQCRWRQKLAKREFRKLKQVANEAGALRLAKTKLEKRLEDLEWRLQLEKRL 916
Query: 869 RVSTEEAKSVEIXXXXXXXXXXXXXXDAAKLATINECNKNAMLQNQXXXXXXXXXXXXXX 928
R S EEAKS EI DAA+LATINECNKNA+L+ Q
Sbjct: 917 RTSGEEAKSSEISKLQKTLESFSLKLDAARLATINECNKNAVLEKQLDISMKEKSAVERE 976
Query: 929 XVAMAEIRKENAVLKSSLDSLEKKNSTLELELIKAQKENNNTIEKLREVEQKCSSLQQNM 988
M E++K+NA+LK+S++SLEKKN LE EL+ A+ NNT++KL+E E++CS LQ ++
Sbjct: 977 LNGMVELKKDNALLKNSMNSLEKKNRVLEKELLNAKTNCNNTLQKLKEAEKRCSELQTSV 1036
Query: 989 QSLEEKLSHLEDENHVLRQKALSVSPKSNRFGLPKAFSDKYTGSLSLPHVDRKPIFESPT 1048
QSLEEKLSHLE+EN VL QK L SP+ R G + +K++ ++ DR+ +FE+PT
Sbjct: 1037 QSLEEKLSHLENENQVLMQKTLITSPE--RIG--QILGEKHSSAVVPAQNDRRSVFETPT 1092
Query: 1049 PSKLITPFSHGLSESRRTKLTAERYQENLEFLSRCIKENLGFNNGKPVAACIIYKSLVHW 1108
PSK I PFSH LSESRR+KLTAER EN E LSRCIKENLGFN+ KP+AAC+IYK L+HW
Sbjct: 1093 PSKHIMPFSHSLSESRRSKLTAERNLENYELLSRCIKENLGFNDDKPLAACVIYKCLLHW 1152
Query: 1109 QAFESERTAIFDYIIEGINDVLKVGDENSILPYWLSNASALLCLLQRSLRSNGLLTANTP 1168
+AFESE TAIF+ IIEGIN+ LK GDEN +LPYWLSNASALLCLLQR+LRSN L A+
Sbjct: 1153 RAFESESTAIFNIIIEGINEALKGGDENGVLPYWLSNASALLCLLQRNLRSNSFLNASAQ 1212
Query: 1169 RTTGSTGLPGRIAYGIKSPFKYIGFGDGIPHVEARYPAILFKQQLTACVEKIFGLIRDNL 1228
R+ GR AYG+KSPFK G DG H+EARYPA+LFKQQLTACVEKI+GLIRDNL
Sbjct: 1213 RS-------GRAAYGVKSPFKLHGPDDGASHIEARYPALLFKQQLTACVEKIYGLIRDNL 1265
Query: 1229 KKELSPLLGSCIQVPKTARVHAGKLSRSPG-VQQQSHTSQWDNIIKFLDSLMRRLRENHV 1287
KKELSPLLGSCIQ PK +R AGK SRSPG V QQS +SQW++I+KFLDSLM RLRENHV
Sbjct: 1266 KKELSPLLGSCIQAPKASRGIAGK-SRSPGGVPQQSPSSQWESILKFLDSLMSRLRENHV 1324
Query: 1288 PSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVSAKEEFAGT 1347
PSFFIRKL+TQVFSFIN+SLFNSLLLRRECCTFSNGEYVKSG++ELEKWI +AKEEFAGT
Sbjct: 1325 PSFFIRKLVTQVFSFINLSLFNSLLLRRECCTFSNGEYVKSGISELEKWIANAKEEFAGT 1384
Query: 1348 SWHELNYIRQAVGFLVIHQKRKKSLDEIRQDLCPALTVRQIYRICTMYWDDKYGTQSVSN 1407
SWHELNYIRQAVGFLVIHQK+KKSLDEIRQDLCP LT+RQIYRI TMYWDDKYGTQSVS+
Sbjct: 1385 SWHELNYIRQAVGFLVIHQKKKKSLDEIRQDLCPVLTIRQIYRISTMYWDDKYGTQSVSS 1444
Query: 1408 EVVAQMREILNKXXXXXXXXXXXXXXXXXIPFSTEDIDMAIPVTDPADTDIPAFLSEYPC 1467
EVV+QMR +++K IPFS EDID AIPV DP++ + P F+SEY C
Sbjct: 1445 EVVSQMRVLVDKDNQKQTSNSFLLDDDMSIPFSAEDIDKAIPVLDPSEIEPPKFVSEYTC 1504
Query: 1468 AQFLVQ 1473
AQ LV+
Sbjct: 1505 AQSLVK 1510
|
|
| TAIR|locus:2149932 XIK [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2199449 XIE [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2025535 XIC [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2007938 MYA1 "myosin 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2117768 XIH [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020270 XIB "myosin XI B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2197773 XIA "myosin XI A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2046570 XID "myosin XI D" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045198 XIF "myosin-like protein XIF" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 |
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 |
 | scaffold_700842.1 | annotation not avaliable (1522 aa) | ||||||
(Arabidopsis lyrata) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1476 | |||
| cd01384 | 674 | cd01384, MYSc_type_XI, Myosin motor domain, plant- | 0.0 | |
| smart00242 | 677 | smart00242, MYSc, Myosin | 0.0 | |
| cd00124 | 679 | cd00124, MYSc, Myosin motor domain | 0.0 | |
| cd01380 | 691 | cd01380, MYSc_type_V, Myosin motor domain, type V | 0.0 | |
| pfam00063 | 679 | pfam00063, Myosin_head, Myosin head (motor domain) | 0.0 | |
| cd01378 | 674 | cd01378, MYSc_type_I, Myosin motor domain, type I | 0.0 | |
| cd01383 | 677 | cd01383, MYSc_type_VIII, Myosin motor domain, plan | 0.0 | |
| cd01381 | 671 | cd01381, MYSc_type_VII, Myosin motor domain, type | 0.0 | |
| cd01377 | 693 | cd01377, MYSc_type_II, Myosin motor domain, type I | 0.0 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 1e-177 | |
| cd01387 | 677 | cd01387, MYSc_type_XV, Myosin motor domain, type X | 1e-158 | |
| cd01379 | 653 | cd01379, MYSc_type_III, Myosin motor domain, type | 1e-143 | |
| cd01382 | 717 | cd01382, MYSc_type_VI, Myosin motor domain, type V | 1e-134 | |
| PTZ00014 | 821 | PTZ00014, PTZ00014, myosin-A; Provisional | 1e-122 | |
| cd01385 | 692 | cd01385, MYSc_type_IX, Myosin motor domain, type I | 1e-116 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 3e-67 | |
| cd01386 | 767 | cd01386, MYSc_type_XVIII, Myosin motor domain, typ | 2e-58 | |
| pfam01843 | 105 | pfam01843, DIL, DIL domain | 6e-37 | |
| cd01385 | 692 | cd01385, MYSc_type_IX, Myosin motor domain, type I | 3e-26 | |
| cd01386 | 767 | cd01386, MYSc_type_XVIII, Myosin motor domain, typ | 2e-10 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 1e-08 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-08 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 1e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 4e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 1e-06 | |
| pfam13851 | 201 | pfam13851, GAS, Growth-arrest specific micro-tubul | 1e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-06 | |
| pfam12718 | 143 | pfam12718, Tropomyosin_1, Tropomyosin like | 2e-06 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 3e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 4e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 9e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 1e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 1e-05 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 2e-05 | |
| COG4942 | 420 | COG4942, COG4942, Membrane-bound metallopeptidase | 2e-05 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 2e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 3e-05 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 4e-05 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 6e-05 | |
| pfam00038 | 312 | pfam00038, Filament, Intermediate filament protein | 7e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 8e-05 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 8e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 9e-05 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 9e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 1e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 1e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 1e-04 | |
| pfam07926 | 132 | pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein | 1e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 2e-04 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 2e-04 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 2e-04 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 2e-04 | |
| COG0497 | 557 | COG0497, RecN, ATPase involved in DNA repair [DNA | 3e-04 | |
| COG1269 | 660 | COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase su | 4e-04 | |
| pfam05557 | 722 | pfam05557, MAD, Mitotic checkpoint protein | 5e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 7e-04 | |
| pfam05911 | 767 | pfam05911, DUF869, Plant protein of unknown functi | 7e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 9e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.001 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.001 | |
| pfam09731 | 493 | pfam09731, Mitofilin, Mitochondrial inner membrane | 0.001 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.002 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 0.002 | |
| pfam12128 | 1198 | pfam12128, DUF3584, Protein of unknown function (D | 0.002 | |
| pfam12128 | 1198 | pfam12128, DUF3584, Protein of unknown function (D | 0.002 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.003 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 0.003 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 0.003 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.003 | |
| pfam13094 | 159 | pfam13094, CENP-Q, CENP-A-nucleosome distal (CAD) | 0.003 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 0.004 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 0.004 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.004 | |
| pfam13870 | 177 | pfam13870, DUF4201, Domain of unknown function (DU | 0.004 |
| >gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
Score = 1107 bits (2864), Expect = 0.0
Identities = 446/675 (66%), Positives = 526/675 (77%), Gaps = 57/675 (8%)
Query: 74 GGVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYK 133
GVDDMTKL+YL+EPGVL NL+ RY LN+IYTYTG+ILIAVNPF +LPHLY+VHMMEQYK
Sbjct: 1 EGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAVNPFQRLPHLYDVHMMEQYK 60
Query: 134 GAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAA 193
GA GELSPHVFA+ADA+YRAMI+E +SQSILVSGESGAGKTETTK++M+YL ++GGRA
Sbjct: 61 GAALGELSPHVFAIADAAYRAMINEGKSQSILVSGESGAGKTETTKMLMRYLAYMGGRAG 120
Query: 194 GDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 253
+ R VEQQVLESNP+LEAFGNA+TVRN+NSSRFGKFVEIQFD GRISGAAIRTYLLER
Sbjct: 121 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDDYGRISGAAIRTYLLER 180
Query: 254 SRVVQITDPERNYHCFYQLC-ASGRDAEKYKLDHPSHFHYLNQSKVYELDGVSSAEEYMK 312
SRV QI+DPERNYHCFYQLC A D +KYKL P FHYLNQS +ELDGV AEEY+
Sbjct: 181 SRVCQISDPERNYHCFYQLCAAPPEDVKKYKLGDPKEFHYLNQSNCFELDGVDDAEEYLA 240
Query: 313 TKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADLF 372
T+RAMD+VGIS E+Q+AIFR +AAILHLGNIEF+ G+E DSSV+KD+KS FHL+ AA+L
Sbjct: 241 TRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFAKGEEIDSSVLKDEKSEFHLKTAAELL 300
Query: 373 MCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRSVG 432
MCD L LC R + T E I K LD ++A SRDALAKT+YSRLFDWLV KIN S+G
Sbjct: 301 MCDEKALEDALCKRVMVTPEEVITKPLDPDSAELSRDALAKTIYSRLFDWLVNKINSSIG 360
Query: 433 QDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEINW 492
QD +S+ IGVLDIYGFESFK NSFEQFCIN NEKLQQHFN+HVFKMEQEEY +EEI+W
Sbjct: 361 QDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDW 420
Query: 493 SYIEFIDNQDVLDLIEK-----------------VTYQT--------------------- 514
SYIEF+DNQDVLDLIEK T++T
Sbjct: 421 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKDHKRFEKPKLS 480
Query: 515 -----------------NTFLDKNRDYVVVEHCNLLSSSKCPFVAGLFPVLSEESSRSSY 557
+ FLDKN+DYVV EH LL++S C FVAGLFP L EE+S+SS
Sbjct: 481 RTAFTIDHYAGDVTYQTDQFLDKNKDYVVAEHQALLNASNCSFVAGLFPPLPEETSKSS- 539
Query: 558 KFSSVASRFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAV 617
KFSS+ SRFKQQLQ+LMETL++TEPHYIRC+KPN++ +P FEN ++L QLRCGGVLEA+
Sbjct: 540 KFSSIGSRFKQQLQSLMETLSTTEPHYIRCIKPNNVLKPGIFENENVLQQLRCGGVLEAI 599
Query: 618 RISLAGYPTRRTYSDFVDRFGLLALEFMDESYEEKALTEKILRKLKLENFQLGRTKVFLR 677
RIS AGYPTRRT+ +F+DRFG+LA E + S ++KA +KIL K+ L+ +Q+G+TKVFLR
Sbjct: 600 RISCAGYPTRRTFDEFLDRFGILAPEVLKGSSDDKAACKKILDKMGLKGYQIGKTKVFLR 659
Query: 678 AGQIGILDSRRAEVL 692
AGQ+ LD+RR EVL
Sbjct: 660 AGQMAELDARRTEVL 674
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674 |
| >gnl|CDD|214580 smart00242, MYSc, Myosin | Back alignment and domain information |
|---|
| >gnl|CDD|238071 cd00124, MYSc, Myosin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) | Back alignment and domain information |
|---|
| >gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|216736 pfam01843, DIL, DIL domain | Back alignment and domain information |
|---|
| >gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|222417 pfam13851, GAS, Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|205039 pfam12718, Tropomyosin_1, Tropomyosin like | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|200948 pfam00038, Filament, Intermediate filament protein | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|149160 pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|223571 COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|224188 COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|218636 pfam05557, MAD, Mitotic checkpoint protein | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218806 pfam05911, DUF869, Plant protein of unknown function (DUF869) | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|220369 pfam09731, Mitofilin, Mitochondrial inner membrane protein | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584) | Back alignment and domain information |
|---|
| >gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584) | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|221919 pfam13094, CENP-Q, CENP-A-nucleosome distal (CAD) centromere subunit | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|222426 pfam13870, DUF4201, Domain of unknown function (DUF4201) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1476 | |||
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 100.0 | |
| PTZ00014 | 821 | myosin-A; Provisional | 100.0 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 100.0 | |
| cd01384 | 674 | MYSc_type_XI Myosin motor domain, plant-specific t | 100.0 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 100.0 | |
| cd01377 | 693 | MYSc_type_II Myosin motor domain, type II myosins. | 100.0 | |
| cd01381 | 671 | MYSc_type_VII Myosin motor domain, type VII myosin | 100.0 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 100.0 | |
| cd01380 | 691 | MYSc_type_V Myosin motor domain, type V myosins. M | 100.0 | |
| cd01383 | 677 | MYSc_type_VIII Myosin motor domain, plant-specific | 100.0 | |
| cd01378 | 674 | MYSc_type_I Myosin motor domain, type I myosins. M | 100.0 | |
| cd01382 | 717 | MYSc_type_VI Myosin motor domain, type VI myosins. | 100.0 | |
| cd01379 | 653 | MYSc_type_III Myosin motor domain, type III myosin | 100.0 | |
| cd01387 | 677 | MYSc_type_XV Myosin motor domain, type XV myosins. | 100.0 | |
| cd01385 | 692 | MYSc_type_IX Myosin motor domain, type IX myosins. | 100.0 | |
| smart00242 | 677 | MYSc Myosin. Large ATPases. ATPase; molecular moto | 100.0 | |
| cd00124 | 679 | MYSc Myosin motor domain. This catalytic (head) do | 100.0 | |
| cd01386 | 767 | MYSc_type_XVIII Myosin motor domain, type XVIII my | 100.0 | |
| KOG0162 | 1106 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| PF00063 | 689 | Myosin_head: Myosin head (motor domain); InterPro: | 100.0 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 100.0 | |
| KOG1892 | 1629 | consensus Actin filament-binding protein Afadin [C | 99.97 | |
| PF01843 | 105 | DIL: DIL domain; InterPro: IPR018444 Dilute encode | 99.94 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 99.22 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 98.64 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 98.62 | |
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 98.58 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.34 | |
| PF02736 | 42 | Myosin_N: Myosin N-terminal SH3-like domain; Inter | 98.05 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 97.93 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.76 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.56 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.34 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.16 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 97.15 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 97.09 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.08 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 97.04 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 96.96 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 96.86 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 96.85 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 96.77 | |
| PRK11637 | 428 | AmiB activator; Provisional | 96.7 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.68 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.64 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 96.6 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 96.59 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 96.57 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 96.5 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 96.47 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.46 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.35 | |
| KOG0925 | 699 | consensus mRNA splicing factor ATP-dependent RNA h | 96.33 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 96.32 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 96.26 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 96.26 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 96.24 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 96.22 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 96.2 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 96.19 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 96.19 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 96.14 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 96.12 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 96.05 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 96.0 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 95.93 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 95.92 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 95.9 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 95.89 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 95.85 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 95.79 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 95.71 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 95.68 | |
| PRK09039 | 343 | hypothetical protein; Validated | 95.64 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 95.56 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 95.52 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 95.51 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 95.35 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 95.35 | |
| PF15066 | 527 | CAGE1: Cancer-associated gene protein 1 family | 95.35 | |
| PRK09039 | 343 | hypothetical protein; Validated | 95.27 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 95.16 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 95.13 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 95.0 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 94.74 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 94.7 | |
| PF14915 | 305 | CCDC144C: CCDC144C protein coiled-coil region | 94.67 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 94.67 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 94.65 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 94.63 | |
| PF09728 | 309 | Taxilin: Myosin-like coiled-coil protein; InterPro | 94.58 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 94.53 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 94.49 | |
| PTZ00014 | 821 | myosin-A; Provisional | 94.49 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 94.47 | |
| PF04091 | 311 | Sec15: Exocyst complex subunit Sec15-like ; InterP | 94.42 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 94.34 | |
| PF13207 | 121 | AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 | 94.33 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 94.29 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 94.28 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 94.28 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 94.23 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 94.14 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 94.1 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 94.08 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 94.02 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 93.85 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 93.82 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 93.81 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 93.69 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 93.62 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 93.61 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 93.56 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 93.5 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 93.47 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 93.46 | |
| KOG1103 | 561 | consensus Predicted coiled-coil protein [Function | 93.25 | |
| PF13401 | 131 | AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S | 93.16 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 93.16 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 93.13 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 93.08 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 93.02 | |
| PF15066 | 527 | CAGE1: Cancer-associated gene protein 1 family | 92.91 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 92.89 | |
| PRK07196 | 434 | fliI flagellum-specific ATP synthase; Validated | 92.86 | |
| PF13191 | 185 | AAA_16: AAA ATPase domain; PDB: 2V1U_A. | 92.85 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 92.8 | |
| PF13238 | 129 | AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB | 92.76 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 92.75 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 92.74 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 92.7 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 92.68 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 92.66 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 92.59 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 92.57 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 92.54 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 92.53 | |
| cd02019 | 69 | NK Nucleoside/nucleotide kinase (NK) is a protein | 92.51 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 92.43 | |
| TIGR02322 | 179 | phosphon_PhnN phosphonate metabolism protein/1,5-b | 92.37 | |
| TIGR03015 | 269 | pepcterm_ATPase putative secretion ATPase, PEP-CTE | 92.35 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 92.26 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 92.21 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 92.18 | |
| PF13870 | 177 | DUF4201: Domain of unknown function (DUF4201) | 92.13 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 92.05 | |
| COG0444 | 316 | DppD ABC-type dipeptide/oligopeptide/nickel transp | 92.05 | |
| PF04156 | 191 | IncA: IncA protein; InterPro: IPR007285 Chlamydia | 92.04 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 91.99 | |
| PF04156 | 191 | IncA: IncA protein; InterPro: IPR007285 Chlamydia | 91.99 | |
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 91.98 | |
| TIGR00150 | 133 | HI0065_YjeE ATPase, YjeE family. Members of this f | 91.82 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 91.77 | |
| KOG1962 | 216 | consensus B-cell receptor-associated protein and r | 91.63 | |
| PRK06696 | 223 | uridine kinase; Validated | 91.58 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 91.57 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 91.54 | |
| COG0194 | 191 | Gmk Guanylate kinase [Nucleotide transport and met | 91.46 | |
| PRK05480 | 209 | uridine/cytidine kinase; Provisional | 91.45 | |
| cd00820 | 107 | PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC | 91.42 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 91.41 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 91.39 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 91.36 | |
| cd01918 | 149 | HprK_C HprK/P, the bifunctional histidine-containi | 91.34 | |
| KOG2991 | 330 | consensus Splicing regulator [RNA processing and m | 91.24 | |
| PRK00300 | 205 | gmk guanylate kinase; Provisional | 91.19 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 91.1 | |
| PF00485 | 194 | PRK: Phosphoribulokinase / Uridine kinase family; | 91.06 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 91.06 | |
| cd01131 | 198 | PilT Pilus retraction ATPase PilT. PilT is a nucle | 91.04 | |
| PF01583 | 156 | APS_kinase: Adenylylsulphate kinase; InterPro: IPR | 91.03 | |
| PF00004 | 132 | AAA: ATPase family associated with various cellula | 91.03 | |
| cd02023 | 198 | UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. | 90.98 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 90.92 | |
| PRK09270 | 229 | nucleoside triphosphate hydrolase domain-containin | 90.8 | |
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 90.79 | |
| PRK13833 | 323 | conjugal transfer protein TrbB; Provisional | 90.72 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 90.71 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 90.68 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 90.67 | |
| PTZ00301 | 210 | uridine kinase; Provisional | 90.59 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 90.55 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 90.54 | |
| cd01129 | 264 | PulE-GspE PulE/GspE The type II secretory pathway | 90.53 | |
| TIGR00235 | 207 | udk uridine kinase. Model contains a number of lon | 90.49 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 90.44 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 90.3 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 90.27 | |
| PRK05541 | 176 | adenylylsulfate kinase; Provisional | 90.26 | |
| PRK08233 | 182 | hypothetical protein; Provisional | 90.24 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 90.23 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 90.11 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 90.03 | |
| cd02028 | 179 | UMPK_like Uridine monophosphate kinase_like (UMPK_ | 89.94 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 89.93 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 89.9 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 89.88 | |
| cd02025 | 220 | PanK Pantothenate kinase (PanK) catalyzes the phos | 89.86 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 89.86 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 89.85 | |
| TIGR02173 | 171 | cyt_kin_arch cytidylate kinase, putative. Proteins | 89.83 | |
| smart00382 | 148 | AAA ATPases associated with a variety of cellular | 89.76 | |
| PRK12402 | 337 | replication factor C small subunit 2; Reviewed | 89.73 | |
| PRK07261 | 171 | topology modulation protein; Provisional | 89.71 | |
| PF04437 | 494 | RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 | 89.69 | |
| cd02020 | 147 | CMPK Cytidine monophosphate kinase (CMPK) catalyze | 89.67 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 89.66 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 89.63 | |
| COG1660 | 286 | Predicted P-loop-containing kinase [General functi | 89.54 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 89.52 | |
| PRK06547 | 172 | hypothetical protein; Provisional | 89.52 | |
| PRK06762 | 166 | hypothetical protein; Provisional | 89.48 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 89.47 | |
| PHA02544 | 316 | 44 clamp loader, small subunit; Provisional | 89.34 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 89.3 | |
| cd00227 | 175 | CPT Chloramphenicol (Cm) phosphotransferase (CPT). | 89.28 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 89.13 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 89.13 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 89.09 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 89.07 | |
| PRK14737 | 186 | gmk guanylate kinase; Provisional | 89.06 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 88.99 | |
| PRK08118 | 167 | topology modulation protein; Reviewed | 88.98 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 88.93 | |
| PRK00131 | 175 | aroK shikimate kinase; Reviewed | 88.89 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 88.83 | |
| TIGR02782 | 299 | TrbB_P P-type conjugative transfer ATPase TrbB. Th | 88.82 | |
| KOG0978 | 698 | consensus E3 ubiquitin ligase involved in syntaxin | 88.82 | |
| PF10498 | 359 | IFT57: Intra-flagellar transport protein 57 ; Inte | 88.78 | |
| PRK14961 | 363 | DNA polymerase III subunits gamma and tau; Provisi | 88.77 | |
| PF07724 | 171 | AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR | 88.75 | |
| PF03668 | 284 | ATP_bind_2: P-loop ATPase protein family; InterPro | 88.74 | |
| cd02024 | 187 | NRK1 Nicotinamide riboside kinase (NRK) is an enzy | 88.71 | |
| cd01130 | 186 | VirB11-like_ATPase Type IV secretory pathway compo | 88.69 | |
| PRK10078 | 186 | ribose 1,5-bisphosphokinase; Provisional | 88.57 | |
| cd00071 | 137 | GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. | 88.56 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 88.56 | |
| PRK00889 | 175 | adenylylsulfate kinase; Provisional | 88.54 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 88.48 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 88.41 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 88.39 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 88.22 | |
| PRK14738 | 206 | gmk guanylate kinase; Provisional | 88.16 | |
| PF00910 | 107 | RNA_helicase: RNA helicase; InterPro: IPR000605 He | 88.13 | |
| PTZ00121 | 2084 | MAEBL; Provisional | 88.09 | |
| PF13245 | 76 | AAA_19: Part of AAA domain | 88.05 | |
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 88.02 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 88.01 | |
| COG0572 | 218 | Udk Uridine kinase [Nucleotide transport and metab | 87.98 | |
| PRK08472 | 434 | fliI flagellum-specific ATP synthase; Validated | 87.98 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 87.97 | |
| TIGR00554 | 290 | panK_bact pantothenate kinase, bacterial type. Sho | 87.97 | |
| TIGR01313 | 163 | therm_gnt_kin carbohydrate kinase, thermoresistant | 87.95 | |
| PF05729 | 166 | NACHT: NACHT domain | 87.94 | |
| KOG4809 | 654 | consensus Rab6 GTPase-interacting protein involved | 87.92 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 87.85 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 87.84 | |
| KOG4809 | 654 | consensus Rab6 GTPase-interacting protein involved | 87.66 | |
| PRK13851 | 344 | type IV secretion system protein VirB11; Provision | 87.66 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 87.59 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 87.56 | |
| TIGR01420 | 343 | pilT_fam pilus retraction protein PilT. This model | 87.56 | |
| PLN03025 | 319 | replication factor C subunit; Provisional | 87.44 | |
| PRK10751 | 173 | molybdopterin-guanine dinucleotide biosynthesis pr | 87.37 | |
| COG4608 | 268 | AppF ABC-type oligopeptide transport system, ATPas | 87.37 | |
| PRK06217 | 183 | hypothetical protein; Validated | 87.36 | |
| cd02027 | 149 | APSK Adenosine 5'-phosphosulfate kinase (APSK) cat | 87.27 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 87.22 | |
| TIGR03263 | 180 | guanyl_kin guanylate kinase. Members of this famil | 87.19 | |
| PF14197 | 69 | Cep57_CLD_2: Centrosome localisation domain of PPC | 87.14 | |
| PRK08972 | 444 | fliI flagellum-specific ATP synthase; Validated | 87.14 | |
| PRK14956 | 484 | DNA polymerase III subunits gamma and tau; Provisi | 87.1 | |
| PF12846 | 304 | AAA_10: AAA-like domain | 87.08 | |
| PRK03846 | 198 | adenylylsulfate kinase; Provisional | 86.93 | |
| COG1102 | 179 | Cmk Cytidylate kinase [Nucleotide transport and me | 86.9 | |
| PRK13900 | 332 | type IV secretion system ATPase VirB11; Provisiona | 86.85 | |
| PRK12377 | 248 | putative replication protein; Provisional | 86.78 | |
| TIGR02524 | 358 | dot_icm_DotB Dot/Icm secretion system ATPase DotB. | 86.68 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 86.64 | |
| PRK00440 | 319 | rfc replication factor C small subunit; Reviewed | 86.55 | |
| PF03266 | 168 | NTPase_1: NTPase; InterPro: IPR004948 This entry r | 86.54 | |
| cd00464 | 154 | SK Shikimate kinase (SK) is the fifth enzyme in th | 86.5 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 86.45 | |
| cd01120 | 165 | RecA-like_NTPases RecA-like NTPases. This family i | 86.4 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 86.37 | |
| PF13671 | 143 | AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 | 86.33 | |
| KOG0249 | 916 | consensus LAR-interacting protein and related prot | 86.31 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 86.2 | |
| PF03205 | 140 | MobB: Molybdopterin guanine dinucleotide synthesis | 86.11 | |
| PF13870 | 177 | DUF4201: Domain of unknown function (DUF4201) | 86.1 | |
| cd02029 | 277 | PRK_like Phosphoribulokinase-like (PRK-like) is a | 86.1 | |
| PRK06645 | 507 | DNA polymerase III subunits gamma and tau; Validat | 86.07 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 86.06 | |
| TIGR02525 | 372 | plasmid_TraJ plasmid transfer ATPase TraJ. Members | 86.03 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 85.87 | |
| TIGR02902 | 531 | spore_lonB ATP-dependent protease LonB. Members of | 85.79 | |
| PRK14964 | 491 | DNA polymerase III subunits gamma and tau; Provisi | 85.74 | |
| PTZ00112 | 1164 | origin recognition complex 1 protein; Provisional | 85.66 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 85.57 | |
| COG4477 | 570 | EzrA Negative regulator of septation ring formatio | 85.55 | |
| COG0563 | 178 | Adk Adenylate kinase and related kinases [Nucleoti | 85.46 | |
| COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transp | 85.42 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 85.41 | |
| PRK07667 | 193 | uridine kinase; Provisional | 85.38 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 85.36 | |
| PRK09111 | 598 | DNA polymerase III subunits gamma and tau; Validat | 85.34 | |
| PF11559 | 151 | ADIP: Afadin- and alpha -actinin-Binding; InterPro | 85.33 | |
| PRK05896 | 605 | DNA polymerase III subunits gamma and tau; Validat | 85.27 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 85.26 | |
| cd02021 | 150 | GntK Gluconate kinase (GntK) catalyzes the phospho | 85.26 | |
| PF00437 | 270 | T2SE: Type II/IV secretion system protein; InterPr | 85.21 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 84.97 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 84.95 | |
| COG1125 | 309 | OpuBA ABC-type proline/glycine betaine transport s | 84.94 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 84.93 | |
| PF02367 | 123 | UPF0079: Uncharacterised P-loop hydrolase UPF0079; | 84.89 | |
| PF10226 | 195 | DUF2216: Uncharacterized conserved proteins (DUF22 | 84.86 | |
| PRK13894 | 319 | conjugal transfer ATPase TrbB; Provisional | 84.86 | |
| TIGR01360 | 188 | aden_kin_iso1 adenylate kinase, isozyme 1 subfamil | 84.82 | |
| PRK05057 | 172 | aroK shikimate kinase I; Reviewed | 84.71 | |
| PRK09825 | 176 | idnK D-gluconate kinase; Provisional | 84.7 | |
| PHA00729 | 226 | NTP-binding motif containing protein | 84.52 | |
| PRK04182 | 180 | cytidylate kinase; Provisional | 84.5 | |
| KOG1962 | 216 | consensus B-cell receptor-associated protein and r | 84.49 | |
| PRK14955 | 397 | DNA polymerase III subunits gamma and tau; Provisi | 84.46 | |
| PRK13764 | 602 | ATPase; Provisional | 84.45 | |
| PRK05342 | 412 | clpX ATP-dependent protease ATP-binding subunit Cl | 84.45 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 84.29 | |
| PRK04040 | 188 | adenylate kinase; Provisional | 84.27 | |
| PF07475 | 171 | Hpr_kinase_C: HPr Serine kinase C-terminal domain; | 84.26 | |
| PRK14732 | 196 | coaE dephospho-CoA kinase; Provisional | 84.16 | |
| KOG3684 | 489 | consensus Ca2+-activated K+ channel proteins (inte | 84.15 | |
| PRK15453 | 290 | phosphoribulokinase; Provisional | 84.11 | |
| PRK13342 | 413 | recombination factor protein RarA; Reviewed | 84.09 | |
| TIGR02533 | 486 | type_II_gspE general secretory pathway protein E. | 84.08 | |
| COG2884 | 223 | FtsE Predicted ATPase involved in cell division [C | 84.07 | |
| PF13555 | 62 | AAA_29: P-loop containing region of AAA domain | 84.07 | |
| TIGR02977 | 219 | phageshock_pspA phage shock protein A. Members of | 83.98 | |
| PRK14527 | 191 | adenylate kinase; Provisional | 83.97 | |
| PF03215 | 519 | Rad17: Rad17 cell cycle checkpoint protein | 83.82 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 83.79 | |
| TIGR02903 | 615 | spore_lon_C ATP-dependent protease, Lon family. Me | 83.71 | |
| cd03115 | 173 | SRP The signal recognition particle (SRP) mediates | 83.69 | |
| PRK14974 | 336 | cell division protein FtsY; Provisional | 83.68 | |
| PRK09099 | 441 | type III secretion system ATPase; Provisional | 83.67 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 83.6 | |
| PRK05537 | 568 | bifunctional sulfate adenylyltransferase subunit 1 | 83.52 | |
| PRK14957 | 546 | DNA polymerase III subunits gamma and tau; Provisi | 83.45 | |
| PRK06315 | 442 | type III secretion system ATPase; Provisional | 83.45 | |
| PRK06761 | 282 | hypothetical protein; Provisional | 83.44 | |
| PF10205 | 102 | KLRAQ: Predicted coiled-coil domain-containing pro | 83.44 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 83.3 | |
| PRK05416 | 288 | glmZ(sRNA)-inactivating NTPase; Provisional | 83.22 | |
| PRK08727 | 233 | hypothetical protein; Validated | 83.12 | |
| PF06637 | 442 | PV-1: PV-1 protein (PLVAP); InterPro: IPR009538 Th | 83.09 | |
| PRK04220 | 301 | 2-phosphoglycerate kinase; Provisional | 82.96 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 82.93 | |
| TIGR00176 | 155 | mobB molybdopterin-guanine dinucleotide biosynthes | 82.88 | |
| PRK08356 | 195 | hypothetical protein; Provisional | 82.83 | |
| PF03193 | 161 | DUF258: Protein of unknown function, DUF258; Inter | 82.81 | |
| cd02034 | 116 | CooC The accessory protein CooC, which contains a | 82.65 | |
| PF08826 | 61 | DMPK_coil: DMPK coiled coil domain like; InterPro: | 82.6 | |
| TIGR00064 | 272 | ftsY signal recognition particle-docking protein F | 82.58 | |
| TIGR03499 | 282 | FlhF flagellar biosynthetic protein FlhF. | 82.48 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 82.48 | |
| PRK08154 | 309 | anaerobic benzoate catabolism transcriptional regu | 82.42 | |
| PF07728 | 139 | AAA_5: AAA domain (dynein-related subfamily); Inte | 82.34 | |
| PF04665 | 241 | Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 | 82.3 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 82.25 | |
| COG0802 | 149 | Predicted ATPase or kinase [General function predi | 82.2 | |
| PRK15093 | 330 | antimicrobial peptide ABC transporter ATP-binding | 82.09 | |
| PRK11308 | 327 | dppF dipeptide transporter ATP-binding subunit; Pr | 82.07 | |
| COG4619 | 223 | ABC-type uncharacterized transport system, ATPase | 82.05 | |
| COG1493 | 308 | HprK Serine kinase of the HPr protein, regulates c | 82.04 | |
| cd03293 | 220 | ABC_NrtD_SsuB_transporters NrtD and SsuB are the A | 82.04 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 81.94 | |
| TIGR02868 | 529 | CydC thiol reductant ABC exporter, CydC subunit. T | 81.88 | |
| PRK10646 | 153 | ADP-binding protein; Provisional | 81.88 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 81.84 | |
| TIGR02673 | 214 | FtsE cell division ATP-binding protein FtsE. This | 81.77 | |
| TIGR00455 | 184 | apsK adenylylsulfate kinase (apsK). Important resi | 81.74 | |
| PRK05688 | 451 | fliI flagellum-specific ATP synthase; Validated | 81.74 | |
| PF00625 | 183 | Guanylate_kin: Guanylate kinase; InterPro: IPR0081 | 81.74 | |
| TIGR00960 | 216 | 3a0501s02 Type II (General) Secretory Pathway (IIS | 81.72 | |
| PF09738 | 302 | DUF2051: Double stranded RNA binding protein (DUF2 | 81.71 | |
| PRK00698 | 205 | tmk thymidylate kinase; Validated | 81.7 | |
| PRK14969 | 527 | DNA polymerase III subunits gamma and tau; Provisi | 81.6 | |
| TIGR01166 | 190 | cbiO cobalt transport protein ATP-binding subunit. | 81.59 | |
| PF00158 | 168 | Sigma54_activat: Sigma-54 interaction domain; Inte | 81.59 | |
| PRK15177 | 213 | Vi polysaccharide export ATP-binding protein VexC; | 81.58 | |
| PRK08116 | 268 | hypothetical protein; Validated | 81.56 | |
| PRK14958 | 509 | DNA polymerase III subunits gamma and tau; Provisi | 81.53 | |
| cd03116 | 159 | MobB Molybdenum is an essential trace element in t | 81.47 | |
| PRK10416 | 318 | signal recognition particle-docking protein FtsY; | 81.46 | |
| TIGR02788 | 308 | VirB11 P-type DNA transfer ATPase VirB11. The VirB | 81.43 | |
| PRK14528 | 186 | adenylate kinase; Provisional | 81.38 | |
| PF00005 | 137 | ABC_tran: ABC transporter This structure is on hol | 81.38 | |
| PRK09473 | 330 | oppD oligopeptide transporter ATP-binding componen | 81.37 | |
| PRK15079 | 331 | oligopeptide ABC transporter ATP-binding protein O | 81.36 | |
| PRK14963 | 504 | DNA polymerase III subunits gamma and tau; Provisi | 81.35 | |
| KOG1899 | 861 | consensus LAR transmembrane tyrosine phosphatase-i | 81.23 | |
| cd03225 | 211 | ABC_cobalt_CbiO_domain1 Domain I of the ABC compon | 81.17 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 81.15 | |
| TIGR01359 | 183 | UMP_CMP_kin_fam UMP-CMP kinase family. This subfam | 81.12 | |
| PRK14962 | 472 | DNA polymerase III subunits gamma and tau; Provisi | 81.06 | |
| cd03259 | 213 | ABC_Carb_Solutes_like ABC Carbohydrate and Solute | 81.02 | |
| PRK04195 | 482 | replication factor C large subunit; Provisional | 81.02 | |
| COG2274 | 709 | SunT ABC-type bacteriocin/lantibiotic exporters, c | 81.0 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 80.93 | |
| PRK09112 | 351 | DNA polymerase III subunit delta'; Validated | 80.9 | |
| PRK13768 | 253 | GTPase; Provisional | 80.86 | |
| cd03260 | 227 | ABC_PstB_phosphate_transporter Phosphate uptake is | 80.84 | |
| PLN02796 | 347 | D-glycerate 3-kinase | 80.83 | |
| cd01124 | 187 | KaiC KaiC is a circadian clock protein primarily f | 80.77 | |
| PRK14959 | 624 | DNA polymerase III subunits gamma and tau; Provisi | 80.73 | |
| PRK11022 | 326 | dppD dipeptide transporter ATP-binding subunit; Pr | 80.68 | |
| cd03255 | 218 | ABC_MJ0796_Lo1CDE_FtsE This family is comprised of | 80.6 | |
| cd02026 | 273 | PRK Phosphoribulokinase (PRK) is an enzyme involve | 80.58 | |
| TIGR03608 | 206 | L_ocin_972_ABC putative bacteriocin export ABC tra | 80.45 | |
| COG4088 | 261 | Predicted nucleotide kinase [Nucleotide transport | 80.44 | |
| PRK14950 | 585 | DNA polymerase III subunits gamma and tau; Provisi | 80.41 | |
| cd01983 | 99 | Fer4_NifH The Fer4_NifH superfamily contains a var | 80.39 | |
| cd03229 | 178 | ABC_Class3 This class is comprised of all BPD (Bin | 80.33 | |
| PRK07721 | 438 | fliI flagellum-specific ATP synthase; Validated | 80.31 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 80.29 | |
| cd03296 | 239 | ABC_CysA_sulfate_importer Part of the ABC transpor | 80.28 | |
| PRK03839 | 180 | putative kinase; Provisional | 80.22 | |
| PRK05439 | 311 | pantothenate kinase; Provisional | 80.15 | |
| PRK14970 | 367 | DNA polymerase III subunits gamma and tau; Provisi | 80.14 | |
| KOG0056 | 790 | consensus Heavy metal exporter HMT1, ABC superfami | 80.08 | |
| smart00072 | 184 | GuKc Guanylate kinase homologues. Active enzymes c | 80.06 | |
| TIGR03574 | 249 | selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Mem | 80.06 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 80.02 |
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-219 Score=2031.95 Aligned_cols=1306 Identities=32% Similarity=0.480 Sum_probs=986.7
Q ss_pred CccCCcEEEEecCCCCEEEEEEEE-eecCCEEEEE--eCCCceeeEEeeeeeehhhhcccccccccccCCCCCCCCCcCc
Q 000467 2 NLRKGSKVWVEDKDLAWVAAEVVS-DSVGRHVQVL--TATGKKFGVVFFFFSIILQVLAAPERVFLRATDDDEEHGGVDD 78 (1476)
Q Consensus 2 ~~~~g~~vw~~~~~~~w~~~~v~~-~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 78 (1476)
++.+|..||+||.+.+|++|.|.. +..++.++.. ..+|..+ .++...+-....++ +..+++||
T Consensus 5 ~~~~g~~~w~p~~e~~Wi~~~~~k~~~~~~~~~~~~~~~~~~~~-------------~v~~~~~~~~~~~~-P~~~~vdD 70 (1463)
T COG5022 5 NAEVGSGCWIPDEEKGWIWAEIIKEAFNKGKVTEEGKKEDGESV-------------SVKKKVLGNDRIKL-PKFDGVDD 70 (1463)
T ss_pred ccccCceeeeeccccceeeeeechhhhhccccccchhhccCccc-------------ceeehhcccccccC-ccccCchh
Confidence 388999999999999999999952 2334443332 2344322 22222220110111 13689999
Q ss_pred cccCCCCCchhHHHHHHHHhhcCCcccccCccEEEEcCCCCCCCCCCHHHHHHhhCCCCCCCChhHHHHHHHHHHHHHhc
Q 000467 79 MTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISE 158 (1476)
Q Consensus 79 l~~L~~l~e~~vl~~L~~R~~~~~iYT~~G~iLiavNP~~~l~~~y~~~~~~~y~~~~~~~~~PHifavA~~Ay~~m~~~ 158 (1476)
||.|+|||||+|||||++||.+++||||+|.+|||||||..|| ||++++|+.|.+++..+++|||||||++||+.|...
T Consensus 71 Lt~LSyLNEpsVl~nL~kRY~n~~IYTYSGlvLIAvNPy~~L~-iYt~d~i~~Y~~K~r~el~PHvfAIAe~aY~~lls~ 149 (1463)
T COG5022 71 LTELSYLNEPAVLHNLEKRYNNGQIYTYSGLVLIAVNPYRDLG-IYTDDIIQSYSGKNRLELEPHVFAIAEEAYRNLLSE 149 (1463)
T ss_pred hhhhhccCcHHHHHHHHHHhhcCceeEEeeeEEEEecCcccCC-CccHHHHHHhccCccccCCchHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999998 999999999999999999999999999999999999
Q ss_pred CCCeEEEEcCCCCCchhHHHHHHHHHHHhhcCCCCCCCCcHHHHHHhhchHHHhhccccccCCCCCCccccEEEEEeCCC
Q 000467 159 HQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTN 238 (1476)
Q Consensus 159 ~~~QsIiisGeSGaGKTe~~k~~~~yla~~~~~~~~~~~~ve~~il~snpiLEaFGnAkT~rN~NSSRfgk~~~l~f~~~ 238 (1476)
++||||||||||||||||+||+||+|||++++.++...++||++||++||||||||||||+|||||||||||++|.||.+
T Consensus 150 ~eNQtIiISGESGAGKTe~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEAFGNAkTvRNdNSSRFGKyikI~Fd~~ 229 (1463)
T COG5022 150 KENQTIIISGESGAGKTENAKRIMQYLASVTSSSTVEISSIEKQILATNPILEAFGNAKTVRNDNSSRFGKYIKIEFDEN 229 (1463)
T ss_pred CCCceEEEecCCCCCchHHHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHHhccccccccCCcccccceEEEEECCC
Confidence 99999999999999999999999999999988776566789999999999999999999999999999999999999999
Q ss_pred CcccceeeeeecccccccccccCCCCcceeehhcccCh-H-HHhhccCCCCCCcccccCCCccccCCCCcHHHHHHHHHH
Q 000467 239 GRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASG-R-DAEKYKLDHPSHFHYLNQSKVYELDGVSSAEEYMKTKRA 316 (1476)
Q Consensus 239 g~i~ga~i~~yLLEksRvv~~~~~ErnfHiFYql~~~~-~-~~~~~~l~~~~~~~yl~~~~~~~~~~~~d~~~f~~~~~a 316 (1476)
|.|+||+|+||||||||||+|+.+|||||||||||+|. + .++.+++..|.+|+||++|+|..++|+||+++|..|+.|
T Consensus 230 g~I~GA~I~~YLLEKSRVV~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~~~~dY~Yl~~~~~~~I~gIdD~kefk~t~~A 309 (1463)
T COG5022 230 GEICGAKIETYLLEKSRVVHQNKNERNYHIFYQLLAGDPEELKKLLLLQNPKDYIYLSQGGCDKIDGIDDAKEFKITLDA 309 (1463)
T ss_pred CceechhhhhhhhhhhhhccCCCCccchhhhhhHhcCChHHHHHHhhccChHhhHhHhhcCCCcCCCcccHHHHHHHHHH
Confidence 99999999999999999999999999999999999997 3 345566789999999999999999999999999999999
Q ss_pred HHHcCCCHHhHHHHHHHHHHHHHhcCeeEecCCCCCcccccCcccHHHHHHHHHHcCCCHHHHHHHHhhceecccCceEE
Q 000467 317 MDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADLFMCDVNLLLATLCTRTIQTREGSII 396 (1476)
Q Consensus 317 l~~lg~~~~~~~~i~~ilaaiLhLGni~f~~~~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~l~~~l~~~~~~~~~~~~~ 396 (1476)
|+++||+.++|.+||++||||||||||+|..+.+ +++.+.+.. .++.+|.|||||+..|.+||++|.|.+++|.|.
T Consensus 310 lktiGi~~eeq~~IF~iLAaILhiGNIef~~~r~-g~a~~~~~~---~~~~~c~LLgId~~~f~k~lvk~~ikt~~E~i~ 385 (1463)
T COG5022 310 LKTIGIDEEEQDQIFKILAAILHIGNIEFKEDRN-GAAIFSDNS---VLDKACYLLGIDPSLFVKWLVKRQIKTGGEWIV 385 (1463)
T ss_pred HHHhCCChHHHHHHHHHHHHHHhhcceeeeeccc-chhhcCCch---HHHHHHHHhCCCHHHHHHHHHHhHhhcCceEEE
Confidence 9999999999999999999999999999988654 444554443 699999999999999999999999999999999
Q ss_pred ecCCHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhcccCCCCceEeeeecccCcccCCCCchHHHHhhhhhhHHHhhhhHH
Q 000467 397 KALDCNAAVASRDALAKTVYSRLFDWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEH 476 (1476)
Q Consensus 397 ~~~~~~~a~~~rdalak~lY~~lF~wiV~~iN~~l~~~~~~~~~IgiLDi~GFE~f~~NsfEQlcINyaNEkLq~~f~~~ 476 (1476)
+|++..||..+||||||+||++||+|||++||.+|..++...+|||||||||||+|+.|||||||||||||||||+||+|
T Consensus 386 ~~~n~~QA~~irdslAK~lY~~lFdwiV~rIN~sL~~~~~~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~Fn~h 465 (1463)
T COG5022 386 VPLNLEQALAIRDSLAKALYSNLFDWIVDRINKSLDHSAAASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQFFNQH 465 (1463)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccceeEEeecchhhhccCcHHHHHHhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999987777899999999999999999999999999999999999999
Q ss_pred hHHHhHHHHhhcCCCcccccccChHHHHHHhhh-cccccccccccccchhhhhhhccCCCCchhhHHHhhhhhc------
Q 000467 477 VFKMEQEEYRREEINWSYIEFIDNQDVLDLIEK-VTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLFPVLS------ 549 (1476)
Q Consensus 477 ~f~~eq~~y~~Egi~~~~i~f~dn~~~ldlie~-~p~Gil~lLd~~~~~~~~ee~~~p~~~~~~f~~kl~~~~~------ 549 (1476)
||++|||||.+|||+|++|+|.|||+||||||+ .|.|||++|| |||.+|.|||++|.+||++.+.
T Consensus 466 ~FklEQEeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLD--------EE~~~p~atd~s~~sKL~~~l~~~~~~~ 537 (1463)
T COG5022 466 MFKLEQEEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLD--------EECVMPHATDESFTSKLAQRLNKNSNPK 537 (1463)
T ss_pred HHHHHHHHHHHhcCcccccccccCcchhHHHhccCCCchHhhhc--------HHhcCCCCCchHHHHHHHHHhccccCcc
Confidence 999999999999999999999999999999997 3799999999 9999999999999999987531
Q ss_pred ----------------------------------------------------------ccccCCCCccccHHHHHHHHHH
Q 000467 550 ----------------------------------------------------------EESSRSSYKFSSVASRFKQQLQ 571 (1476)
Q Consensus 550 ----------------------------------------------------------~~~~~~~~~~~tv~~~f~~~l~ 571 (1476)
++..+. .+++|+|++||.||.
T Consensus 538 f~~~rf~~~~FvvkHYAgDVeY~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~~~~K-~~~pT~gs~~K~sl~ 616 (1463)
T COG5022 538 FKKSRFRDNKFVVKHYAGDVEYDVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEENIESK-GRFPTLGSRFKESLN 616 (1463)
T ss_pred ccccccCCCceEEEeecccceeeccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhhhcccc-CCCCcHHHHHHHHHH
Confidence 001112 267999999999999
Q ss_pred HHHHHHcccCCeeEEecCCCCCCCCCCCChhHHHHHhhccChhhHHHHHhhcCCcccchHHHHHHHhhhhhhhccc----
Q 000467 572 ALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDE---- 647 (1476)
Q Consensus 572 ~L~~~l~~t~~h~irCIkpN~~~~p~~fd~~~v~~QLr~~gvle~iri~~~gyp~r~~~~~F~~ry~~l~~~~~~~---- 647 (1476)
.||++|++|+||||||||||..|+|+.||+.+|++|||||||||+|||+|+|||+||+|+||+.||++|.|.....
T Consensus 617 ~Lm~tl~sTqphyIRCIkPN~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~~~~~~ 696 (1463)
T COG5022 617 SLMSTLNSTQPHYIRCIKPNEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSWTGEYT 696 (1463)
T ss_pred HHHHHHHhcCCceeEeeCCCcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999964321
Q ss_pred -ChhHHHHHHHHHHHcCcC--CcccccceeccccccccchhhhhhhhhhhHHHHHHHHHHhhHHHHHHHhhhHHHHHHHH
Q 000467 648 -SYEEKALTEKILRKLKLE--NFQLGRTKVFLRAGQIGILDSRRAEVLDSAARCIQHRWRTFIAHRNFVSIRAAAFVLQA 724 (1476)
Q Consensus 648 -~~~~~~~~~~il~~~~~~--~~~iGkTkVFlr~~~~~~Le~~r~~~~~~aa~~IQ~~~R~~l~Rk~~~~~r~a~i~iQa 724 (1476)
..|.+.+|+.||..+.++ .||+|+||||||+|+++.||.+|...++.+++.||++|||++.|++|....+.+..+|.
T Consensus 697 ~~~~~~~~~~~IL~~~~id~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~ 776 (1463)
T COG5022 697 WKEDTKNAVKSILEELVIDSSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQV 776 (1463)
T ss_pred chhHHHHHHHHHHHhhcCChhheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 136789999999998776 59999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccchhcccccchhhHHHHHHHHHHHHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000467 725 QCRGCLARKLYGVKRETAAAISLQKYVRRWLSRHAFLKLSLAAIVIQ-SNIRGFSIRERFLHRKRHKAATVIQACWRMCK 803 (1476)
Q Consensus 725 ~~Rg~laR~~~~~~r~~~aai~IQ~~~R~~~~Rk~y~~~r~aai~IQ-s~~Rg~~aR~~~~~~r~~~Aa~~IQ~~~R~~~ 803 (1476)
..+|++.|++...--...+++.+|..||....|+.|......++.+| ..+|....+...+.....++++.+|+.||.+.
T Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~~ 856 (1463)
T COG5022 777 IQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLK 856 (1463)
T ss_pred HhcccchhhhcccchHHHhHHHhhHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999887766666789999999999999999999999999999 66777777666667777899999999999999
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 000467 804 FRSAFQHHQTSIIAIQCRWRQKLAKRELRRLKQVANEAGALRLAKNKLERQLEDLTWRVQLEKKLRVSTEEAKSVEISKL 883 (1476)
Q Consensus 804 ~R~~y~~~~~a~i~iQ~~~R~~~arr~~~~lr~~~~~~~~l~~~~~~le~ki~el~~rl~~ek~l~~~~~eak~~E~~~L 883 (1476)
.+++|..+.+.++.+|+.+|...|++++..++.+.+++..+......++.++.++...+....... -+-+...+..|
T Consensus 857 ~~kr~~~L~k~~i~~~~~~r~~~a~r~~~e~k~~~~~~~~l~~~~~~l~~~~~el~~~~~s~~~~~---~~~k~e~~a~l 933 (1463)
T COG5022 857 AKKRFSLLKKETIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLIEN---LEFKTELIARL 933 (1463)
T ss_pred hhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHhhccchhhhhh---hHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999888876554311100 00111122222
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHH
Q 000467 884 QKLLESLNLELDAAKLATINECNKNAMLQNQLELSLKEKSALERELVAMAEIRKENAVLKSSLDSLEKKNSTLELELIKA 963 (1476)
Q Consensus 884 q~~le~l~~el~~~~~~~~~e~~~~~~~~~~l~~~~~e~~~l~e~~~~~~~L~~e~~~Lk~~l~~l~~~i~ele~~~~e~ 963 (1476)
+.-++....+..... +.. ...++.++..+..+|++...+....+...+....+
T Consensus 934 k~~l~~~d~~~~~~~-----~~~---------------------~~~~~~~l~~~~~~l~~~~~~~~~~~k~~~~~~~~- 986 (1463)
T COG5022 934 KKLLNNIDLEEGPSI-----EYV---------------------KLPELNKLHEVESKLKETSEEYEDLLKKSTILVRE- 986 (1463)
T ss_pred HHHhhcccccchhHH-----HHH---------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHh-
Confidence 222222100000000 000 00012222222222222222211111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHH---HHHHHHhhhccCCCCcCCCCcccccccccCCCCCCCCCC
Q 000467 964 QKENNNTIEKLREVEQKCSSLQQNMQSLEEKLSHLEDE---NHVLRQKALSVSPKSNRFGLPKAFSDKYTGSLSLPHVDR 1040 (1476)
Q Consensus 964 ~~e~~~l~~~l~~~e~~i~~L~~e~~~lee~l~~Le~E---~~~Lkqk~~~~s~~~~~~~~~~~l~e~l~~~~~~~~~~~ 1040 (1476)
......++....+++.....+...+.+..+.++.. +..+.......+. ....++...+...+..
T Consensus 987 ---~~~~~~el~~~~~~l~~~~~~~~~l~~~~~~lk~~~~~~~~l~~~~~~~~s----------~~~~~~~~~~~~~~~~ 1053 (1463)
T COG5022 987 ---GNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIISS----------ESTELSILKPLQKLKG 1053 (1463)
T ss_pred ---cccHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccccchhhhhhhhhhhhcc----------chhhhhccCcccchhh
Confidence 11111111111111111111111111111111111 2222111100000 0000000000000000
Q ss_pred CC---CCCCCCCCCCccCCccCCchhHhhhhhHHHhhhhHHHHHHHHhh-hcCCCC-CccchHHHH-HHHHhcccc-ccc
Q 000467 1041 KP---IFESPTPSKLITPFSHGLSESRRTKLTAERYQENLEFLSRCIKE-NLGFNN-GKPVAACII-YKSLVHWQA-FES 1113 (1476)
Q Consensus 1041 ~~---~~e~~~~~~~~~~~~~~~~e~e~~~~l~E~q~E~~d~l~~~l~~-~~~~~~-~~p~~A~il-f~cl~~~~~-~~~ 1113 (1476)
.. ..+...+. ..+.++.. ....-....++.+....+++.+.. ++...+ .-+.||..+ +....+|+. ...
T Consensus 1054 ~~~~~~~~l~~~~-~~l~~~r~---~~~~~~~q~~~~e~t~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ 1129 (1463)
T COG5022 1054 LLLLENNQLQARY-KALKLRRE---NSLLDDKQLYQLESTENLLKTINVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQ 1129 (1463)
T ss_pred hhhHHHHHhhhhH-hhhhhcCc---ccchhHHHHHHHHhhhhhhhhhccchhhhhcccccchhhHHHHHHHHhhccchHH
Confidence 00 00000000 00000000 000001112334444555554432 223321 112244443 333345654 222
Q ss_pred chhhHHHHHHHHHHHhhccC---CCCCcccchhhhHHHHHH---HHHhhhcccCCCCCCCCCCCCCCCCCcccccCCCCC
Q 000467 1114 ERTAIFDYIIEGINDVLKVG---DENSILPYWLSNASALLC---LLQRSLRSNGLLTANTPRTTGSTGLPGRIAYGIKSP 1187 (1476)
Q Consensus 1114 ~~~~ll~~ii~~i~~~i~~~---~d~~~layWLSN~~~Ll~---~Lqq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1187 (1476)
+...++...+..++.+...- +-.....||.+|...+++ +.-.. +. ... ..++ ..+++.
T Consensus 1130 ~~~~~~~~~~~~le~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~--------~~~--~~~~-----~d~~~~ 1193 (1463)
T COG5022 1130 EISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPFAALS-EK--------RLY--QSAL-----YDEKSK 1193 (1463)
T ss_pred hhhhHHHHHHhhccchhccccchhccccccccccccccCCCCCchhhcc-hh--------hhh--Hhhh-----hccccc
Confidence 33445555566666554433 223447899999998763 11100 00 000 0000 001110
Q ss_pred cccCCCCCCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCccccccCCCcCCCCCCCCCccccc
Q 000467 1188 FKYIGFGDGIPHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGSCIQVPKTARVHAGKLSRSPGVQQQSHTSQ 1267 (1476)
Q Consensus 1188 ~~~~~~~~e~~~v~~~~p~~~~~qqL~~~v~~iy~~l~~~~~~~l~~~L~~~i~~~~~~~~~~g~~~r~~~~~~~~~~~~ 1267 (1476)
++.+ -.-..+..+..+..++|..|.... .+.+++...+.....+...+|+.. +...+..+...+
T Consensus 1194 ----~s~s---------~v~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 1257 (1463)
T COG5022 1194 ----LSSS---------EVNDLKNELIALFSKIFSGWPRGD--KLKKLISEGWVPTEYSTSLKGFNN-LNKKFDTPASMS 1257 (1463)
T ss_pred ----ccHH---------HHHHHHHHHHHHHHhccccchhhh--hhhhhhhhccchhhhccccccccc-hhhcccCcccCc
Confidence 0001 122466788888888888887665 344444322222222222223321 111222345567
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhHHHHHHhhccCCCCCccchhHHhhchHHHHHHHhhcCcccccc
Q 000467 1268 WDNIIKFLDSLMRRLRENHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVSAKEEFAGT 1347 (1476)
Q Consensus 1268 ~~~il~~L~~~~~~L~~~~v~~~l~~Q~f~QlF~~Ina~lfN~Ll~r~~~cs~s~G~qIr~nls~LE~W~~~~~l~~~~~ 1347 (1476)
...++.+++++...++.+.+.+.+....++++.-++|+.+||.|..|..-..|..|.++.+|.+.+.+||+.+|. ..
T Consensus 1258 ~~~ll~~~n~i~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~n~L~~~~~~~~~k~~~~~~~n~~~~~~w~~~~~i---~~ 1334 (1463)
T COG5022 1258 NEKLLSLLNSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLRWKSATEVNYNSEELDDWCREFEI---SD 1334 (1463)
T ss_pred HHHHHHHHHHHHHHHHHhhcchhhhhHHHHhHhhhcchhhhhhhhcccCccchhhcccccccchhhhHHHHhhcc---cc
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999986 56
Q ss_pred cHHhhHHHHHHHHHHhccccCccCHHHHHHccCCCCCHHHHHHHHhcCccCCCCcccCCHHHHHHHHHHhhh
Q 000467 1348 SWHELNYIRQAVGFLVIHQKRKKSLDEIRQDLCPALTVRQIYRICTMYWDDKYGTQSVSNEVVAQMREILNK 1419 (1476)
Q Consensus 1348 ~~~~L~~i~Qa~~lLq~~kk~~~~~~~i~~~~C~~L~~~Ql~kiL~~Y~~d~~e~~~v~~~~i~~v~~~~~~ 1419 (1476)
+..+|+++.||+..+++.++...+++++ .+.|.+|+|.|+.+|+.+|.|.+++ .++|.++..+|......
T Consensus 1335 ~~~~l~~l~q~~k~~~~~~~dl~~~~~~-~~~~~~l~~~~~~~L~~~y~~~~~e-~~l~ke~~~~~~a~~~~ 1404 (1463)
T COG5022 1335 VDEELEELIQAVKVLQLLKDDLNKLDEL-LDACYSLNPAEIQNLKSRYDPADKE-NNLPKEILKKIEALLIK 1404 (1463)
T ss_pred hHHHHHHHHhhhhhhhhhhCCHHHHHHH-HHHHHhcCHHHHHHHHHhhhhhccc-CCChHHHHHHHhhhhhH
Confidence 6689999999999999998888888888 5999999999999999999999997 69999999777555543
|
|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01377 MYSc_type_II Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >cd01381 MYSc_type_VII Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01380 MYSc_type_V Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >cd01378 MYSc_type_I Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >cd01382 MYSc_type_VI Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >cd01379 MYSc_type_III Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >cd01387 MYSc_type_XV Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >cd01385 MYSc_type_IX Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >smart00242 MYSc Myosin | Back alignment and domain information |
|---|
| >cd00124 MYSc Myosin motor domain | Back alignment and domain information |
|---|
| >cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >KOG0162 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >KOG1892 consensus Actin filament-binding protein Afadin [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0925 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PF15066 CAGE1: Cancer-associated gene protein 1 family | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF14915 CCDC144C: CCDC144C protein coiled-coil region | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1103 consensus Predicted coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PF15066 CAGE1: Cancer-associated gene protein 1 family | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PRK07196 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | Back alignment and domain information |
|---|
| >TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PF13870 DUF4201: Domain of unknown function (DUF4201) | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >TIGR00150 HI0065_YjeE ATPase, YjeE family | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK06696 uridine kinase; Validated | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK05480 uridine/cytidine kinase; Provisional | Back alignment and domain information |
|---|
| >cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01918 HprK_C HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria | Back alignment and domain information |
|---|
| >KOG2991 consensus Splicing regulator [RNA processing and modification] | Back alignment and domain information |
|---|
| >PRK00300 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >cd01131 PilT Pilus retraction ATPase PilT | Back alignment and domain information |
|---|
| >PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport | Back alignment and domain information |
|---|
| >cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >PRK13833 conjugal transfer protein TrbB; Provisional | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >PTZ00301 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) | Back alignment and domain information |
|---|
| >TIGR00235 udk uridine kinase | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PRK05541 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK08233 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR02173 cyt_kin_arch cytidylate kinase, putative | Back alignment and domain information |
|---|
| >smart00382 AAA ATPases associated with a variety of cellular activities | Back alignment and domain information |
|---|
| >PRK12402 replication factor C small subunit 2; Reviewed | Back alignment and domain information |
|---|
| >PRK07261 topology modulation protein; Provisional | Back alignment and domain information |
|---|
| >PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases | Back alignment and domain information |
|---|
| >cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >COG1660 Predicted P-loop-containing kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PRK06547 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06762 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PHA02544 44 clamp loader, small subunit; Provisional | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT) | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PRK14737 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >PRK08118 topology modulation protein; Reviewed | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >PRK00131 aroK shikimate kinase; Reviewed | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB | Back alignment and domain information |
|---|
| >KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms | Back alignment and domain information |
|---|
| >PRK14961 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins | Back alignment and domain information |
|---|
| >cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+) | Back alignment and domain information |
|---|
| >cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases | Back alignment and domain information |
|---|
| >PRK10078 ribose 1,5-bisphosphokinase; Provisional | Back alignment and domain information |
|---|
| >cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK00889 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PRK14738 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) | Back alignment and domain information |
|---|
| >PTZ00121 MAEBL; Provisional | Back alignment and domain information |
|---|
| >PF13245 AAA_19: Part of AAA domain | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >COG0572 Udk Uridine kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK08472 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00554 panK_bact pantothenate kinase, bacterial type | Back alignment and domain information |
|---|
| >TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family | Back alignment and domain information |
|---|
| >PF05729 NACHT: NACHT domain | Back alignment and domain information |
|---|
| >KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK13851 type IV secretion system protein VirB11; Provisional | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01420 pilT_fam pilus retraction protein PilT | Back alignment and domain information |
|---|
| >PLN03025 replication factor C subunit; Provisional | Back alignment and domain information |
|---|
| >PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional | Back alignment and domain information |
|---|
| >COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK06217 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS) | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR03263 guanyl_kin guanylate kinase | Back alignment and domain information |
|---|
| >PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89 | Back alignment and domain information |
|---|
| >PRK08972 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PRK14956 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF12846 AAA_10: AAA-like domain | Back alignment and domain information |
|---|
| >PRK03846 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK13900 type IV secretion system ATPase VirB11; Provisional | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PRK00440 rfc replication factor C small subunit; Reviewed | Back alignment and domain information |
|---|
| >PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency [] | Back alignment and domain information |
|---|
| >cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >cd01120 RecA-like_NTPases RecA-like NTPases | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B | Back alignment and domain information |
|---|
| >KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A | Back alignment and domain information |
|---|
| >PF13870 DUF4201: Domain of unknown function (DUF4201) | Back alignment and domain information |
|---|
| >cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes | Back alignment and domain information |
|---|
| >PRK06645 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >TIGR02902 spore_lonB ATP-dependent protease LonB | Back alignment and domain information |
|---|
| >PRK14964 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PTZ00112 origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >PRK07667 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PRK09111 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch | Back alignment and domain information |
|---|
| >PRK05896 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >cd02021 GntK Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate | Back alignment and domain information |
|---|
| >PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop | Back alignment and domain information |
|---|
| >PF10226 DUF2216: Uncharacterized conserved proteins (DUF2216); InterPro: IPR019359 Proteins in this entry are found in Metazoa and contain a coiled-coil domain | Back alignment and domain information |
|---|
| >PRK13894 conjugal transfer ATPase TrbB; Provisional | Back alignment and domain information |
|---|
| >TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily | Back alignment and domain information |
|---|
| >PRK05057 aroK shikimate kinase I; Reviewed | Back alignment and domain information |
|---|
| >PRK09825 idnK D-gluconate kinase; Provisional | Back alignment and domain information |
|---|
| >PHA00729 NTP-binding motif containing protein | Back alignment and domain information |
|---|
| >PRK04182 cytidylate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK14955 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK13764 ATPase; Provisional | Back alignment and domain information |
|---|
| >PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >PRK04040 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF07475 Hpr_kinase_C: HPr Serine kinase C-terminal domain; InterPro: IPR011104 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] | Back alignment and domain information |
|---|
| >PRK14732 coaE dephospho-CoA kinase; Provisional | Back alignment and domain information |
|---|
| >KOG3684 consensus Ca2+-activated K+ channel proteins (intermediate/small conductance classes) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK15453 phosphoribulokinase; Provisional | Back alignment and domain information |
|---|
| >PRK13342 recombination factor protein RarA; Reviewed | Back alignment and domain information |
|---|
| >TIGR02533 type_II_gspE general secretory pathway protein E | Back alignment and domain information |
|---|
| >COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF13555 AAA_29: P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >TIGR02977 phageshock_pspA phage shock protein A | Back alignment and domain information |
|---|
| >PRK14527 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF03215 Rad17: Rad17 cell cycle checkpoint protein | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >TIGR02903 spore_lon_C ATP-dependent protease, Lon family | Back alignment and domain information |
|---|
| >cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes | Back alignment and domain information |
|---|
| >PRK14974 cell division protein FtsY; Provisional | Back alignment and domain information |
|---|
| >PRK09099 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PRK05537 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Validated | Back alignment and domain information |
|---|
| >PRK14957 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK06315 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >PRK06761 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF10205 KLRAQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019343 This entry represents a N-terminal 100 residues long domain, which contains a conserved KLRAQ motif | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF06637 PV-1: PV-1 protein (PLVAP); InterPro: IPR009538 This family consists of several PV-1 (PLVAP) proteins, which seem to be specific to mammals | Back alignment and domain information |
|---|
| >PRK04220 2-phosphoglycerate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB | Back alignment and domain information |
|---|
| >PRK08356 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis | Back alignment and domain information |
|---|
| >cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) | Back alignment and domain information |
|---|
| >PF08826 DMPK_coil: DMPK coiled coil domain like; InterPro: IPR014930 This domain is found in the myotonic dystrophy protein kinase (DMPK) and adopts a coiled coil structure | Back alignment and domain information |
|---|
| >TIGR00064 ftsY signal recognition particle-docking protein FtsY | Back alignment and domain information |
|---|
| >TIGR03499 FlhF flagellar biosynthetic protein FlhF | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >PRK08154 anaerobic benzoate catabolism transcriptional regulator; Reviewed | Back alignment and domain information |
|---|
| >PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >PF04665 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 This entry contains uncharacterised proteins belonging to the B354L family which include the pox virus A32 protein | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >COG0802 Predicted ATPase or kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >COG1493 HprK Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >TIGR02868 CydC thiol reductant ABC exporter, CydC subunit | Back alignment and domain information |
|---|
| >PRK10646 ADP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >TIGR02673 FtsE cell division ATP-binding protein FtsE | Back alignment and domain information |
|---|
| >TIGR00455 apsK adenylylsulfate kinase (apsK) | Back alignment and domain information |
|---|
| >PRK05688 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PF00625 Guanylate_kin: Guanylate kinase; InterPro: IPR008144 Guanylate kinase (2 | Back alignment and domain information |
|---|
| >TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein | Back alignment and domain information |
|---|
| >PF09738 DUF2051: Double stranded RNA binding protein (DUF2051); InterPro: IPR019139 This entry represents transcriptional repressors which preferentially bind to the GC-rich consensus sequence (5'-AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA | Back alignment and domain information |
|---|
| >PRK00698 tmk thymidylate kinase; Validated | Back alignment and domain information |
|---|
| >PRK14969 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR01166 cbiO cobalt transport protein ATP-binding subunit | Back alignment and domain information |
|---|
| >PF00158 Sigma54_activat: Sigma-54 interaction domain; InterPro: IPR002078 Some bacterial regulatory proteins activate the expression of genes from promoters recognised by core RNA polymerase associated with the alternative sigma-54 factor | Back alignment and domain information |
|---|
| >PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK14958 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes | Back alignment and domain information |
|---|
| >PRK10416 signal recognition particle-docking protein FtsY; Provisional | Back alignment and domain information |
|---|
| >TIGR02788 VirB11 P-type DNA transfer ATPase VirB11 | Back alignment and domain information |
|---|
| >PRK14528 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems | Back alignment and domain information |
|---|
| >PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional | Back alignment and domain information |
|---|
| >PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional | Back alignment and domain information |
|---|
| >PRK14963 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only] | Back alignment and domain information |
|---|
| >cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01359 UMP_CMP_kin_fam UMP-CMP kinase family | Back alignment and domain information |
|---|
| >PRK14962 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup | Back alignment and domain information |
|---|
| >PRK04195 replication factor C large subunit; Provisional | Back alignment and domain information |
|---|
| >COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >PRK09112 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK13768 GTPase; Provisional | Back alignment and domain information |
|---|
| >cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient | Back alignment and domain information |
|---|
| >PLN02796 D-glycerate 3-kinase | Back alignment and domain information |
|---|
| >cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs | Back alignment and domain information |
|---|
| >PRK14959 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) | Back alignment and domain information |
|---|
| >cd02026 PRK Phosphoribulokinase (PRK) is an enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes | Back alignment and domain information |
|---|
| >TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group | Back alignment and domain information |
|---|
| >COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK14950 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain | Back alignment and domain information |
|---|
| >cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment | Back alignment and domain information |
|---|
| >PRK07721 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import | Back alignment and domain information |
|---|
| >PRK03839 putative kinase; Provisional | Back alignment and domain information |
|---|
| >PRK05439 pantothenate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK14970 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >smart00072 GuKc Guanylate kinase homologues | Back alignment and domain information |
|---|
| >TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1476 | ||||
| 2dfs_A | 1080 | 3-D Structure Of Myosin-V Inhibited State Length = | 1e-165 | ||
| 1oe9_A | 795 | Crystal Structure Of Myosin V Motor With Essential | 1e-146 | ||
| 1w8j_A | 766 | Crystal Structure Of Myosin V Motor Domain - Nucleo | 1e-144 | ||
| 3mkd_A | 692 | Crystal Structure Of Myosin-2 Dictyostelium Discoid | 1e-125 | ||
| 3mkd_A | 692 | Crystal Structure Of Myosin-2 Dictyostelium Discoid | 3e-14 | ||
| 1w9i_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-125 | ||
| 1w9i_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 3e-26 | ||
| 1w9j_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-125 | ||
| 1w9j_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 8e-26 | ||
| 2y0r_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-124 | ||
| 2y0r_X | 758 | Structural Basis For The Allosteric Interference Of | 3e-25 | ||
| 2aka_A | 776 | Structure Of The Nucleotide-Free Myosin Ii Motor Do | 1e-124 | ||
| 2aka_A | 776 | Structure Of The Nucleotide-Free Myosin Ii Motor Do | 6e-26 | ||
| 1jwy_A | 776 | Crystal Structure Of The Dynamin A Gtpase Domain Co | 1e-124 | ||
| 1jwy_A | 776 | Crystal Structure Of The Dynamin A Gtpase Domain Co | 6e-26 | ||
| 2y9e_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-124 | ||
| 2y9e_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-24 | ||
| 1mma_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-124 | ||
| 1mma_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 3e-26 | ||
| 1yv3_A | 762 | The Structural Basis Of Blebbistatin Inhibition And | 1e-124 | ||
| 1yv3_A | 762 | The Structural Basis Of Blebbistatin Inhibition And | 7e-26 | ||
| 1d0x_A | 761 | Dictyostelium Myosin S1dc (Motor Domain Fragment) C | 1e-124 | ||
| 1d0x_A | 761 | Dictyostelium Myosin S1dc (Motor Domain Fragment) C | 7e-26 | ||
| 1w9l_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-124 | ||
| 1w9l_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 7e-26 | ||
| 2xel_A | 776 | Molecular Mechanism Of Pentachloropseudilin Mediate | 1e-124 | ||
| 2xel_A | 776 | Molecular Mechanism Of Pentachloropseudilin Mediate | 1e-26 | ||
| 2jhr_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-124 | ||
| 2jhr_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-26 | ||
| 3mnq_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-124 | ||
| 3mnq_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-26 | ||
| 1fmv_A | 761 | Crystal Structure Of The Apo Motor Domain Of Dictyo | 1e-124 | ||
| 1fmv_A | 761 | Crystal Structure Of The Apo Motor Domain Of Dictyo | 7e-26 | ||
| 3myh_X | 762 | Insights Into The Importance Of Hydrogen Bonding In | 1e-124 | ||
| 3myh_X | 762 | Insights Into The Importance Of Hydrogen Bonding In | 6e-26 | ||
| 1w9k_A | 770 | Dictyostelium Discoideum Myosin Ii Motor Domain S45 | 1e-123 | ||
| 1w9k_A | 770 | Dictyostelium Discoideum Myosin Ii Motor Domain S45 | 3e-26 | ||
| 2x9h_A | 695 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-123 | ||
| 2x9h_A | 695 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 6e-15 | ||
| 2xo8_A | 776 | Crystal Structure Of Myosin-2 In Complex With Tribr | 1e-123 | ||
| 2xo8_A | 776 | Crystal Structure Of Myosin-2 In Complex With Tribr | 1e-26 | ||
| 1mmn_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-123 | ||
| 1mmn_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 2e-25 | ||
| 1g8x_A | 1010 | Structure Of A Genetically Engineered Molecular Mot | 1e-122 | ||
| 1g8x_A | 1010 | Structure Of A Genetically Engineered Molecular Mot | 1e-26 | ||
| 1mmg_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-122 | ||
| 1mmg_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 7e-26 | ||
| 1mmd_A | 762 | Truncated Head Of Myosin From Dictyostelium Discoid | 1e-122 | ||
| 1mmd_A | 762 | Truncated Head Of Myosin From Dictyostelium Discoid | 6e-26 | ||
| 1lvk_A | 762 | X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N | 1e-122 | ||
| 1lvk_A | 762 | X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N | 3e-25 | ||
| 1lkx_A | 697 | Motor Domain Of Myoe, A Class-I Myosin Length = 697 | 1e-113 | ||
| 4a7f_C | 697 | Structure Of The Actin-Tropomyosin-Myosin Complex ( | 1e-113 | ||
| 2x51_A | 789 | M6 Delta Insert1 Length = 789 | 1e-104 | ||
| 2vas_A | 788 | Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo | 1e-104 | ||
| 4dbq_A | 788 | Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos | 1e-104 | ||
| 3l9i_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant | 1e-101 | ||
| 2bki_A | 858 | Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St | 1e-101 | ||
| 2bkh_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 1e-101 | ||
| 4e7z_A | 798 | Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F | 1e-101 | ||
| 2v26_A | 784 | Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L | 1e-101 | ||
| 4e7s_A | 798 | Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat | 1e-101 | ||
| 4anj_A | 1052 | Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St | 1e-100 | ||
| 4dbp_A | 814 | Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal | 1e-100 | ||
| 4dbr_A | 786 | Myosin Vi D179y (md) Pre-powerstroke State Length = | 1e-100 | ||
| 1dfl_A | 831 | Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra | 4e-99 | ||
| 1dfl_A | 831 | Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra | 9e-29 | ||
| 1qvi_A | 840 | Crystal Structure Of Scallop Myosin S1 In The Pre-P | 4e-99 | ||
| 1qvi_A | 840 | Crystal Structure Of Scallop Myosin S1 In The Pre-P | 8e-29 | ||
| 1kk7_A | 837 | Scallop Myosin In The Near Rigor Conformation Lengt | 4e-99 | ||
| 1kk7_A | 837 | Scallop Myosin In The Near Rigor Conformation Lengt | 9e-29 | ||
| 1b7t_A | 835 | Myosin Digested By Papain Length = 835 | 4e-99 | ||
| 1b7t_A | 835 | Myosin Digested By Papain Length = 835 | 9e-29 | ||
| 1dfk_A | 830 | Nucleotide-Free Scallop Myosin S1-Near Rigor State | 5e-99 | ||
| 1dfk_A | 830 | Nucleotide-Free Scallop Myosin S1-Near Rigor State | 9e-29 | ||
| 2os8_A | 840 | Rigor-Like Structures Of Muscle Myosins Reveal Key | 4e-98 | ||
| 2os8_A | 840 | Rigor-Like Structures Of Muscle Myosins Reveal Key | 2e-26 | ||
| 4db1_A | 783 | Cardiac Human Myosin S1dc, Beta Isoform Complexed W | 6e-97 | ||
| 4db1_A | 783 | Cardiac Human Myosin S1dc, Beta Isoform Complexed W | 1e-22 | ||
| 2ec6_A | 838 | Placopecten Striated Muscle Myosin Ii Length = 838 | 2e-96 | ||
| 2ec6_A | 838 | Placopecten Striated Muscle Myosin Ii Length = 838 | 8e-29 | ||
| 2w4g_M | 840 | Isometrically Contracting Insect Asynchronous Fligh | 2e-96 | ||
| 2w4g_M | 840 | Isometrically Contracting Insect Asynchronous Fligh | 9e-25 | ||
| 3i5g_A | 839 | Crystal Structure Of Rigor-Like Squid Myosin S1 Len | 6e-96 | ||
| 3i5g_A | 839 | Crystal Structure Of Rigor-Like Squid Myosin S1 Len | 3e-29 | ||
| 1i84_S | 1184 | Cryo-Em Structure Of The Heavy Meromyosin Subfragme | 2e-93 | ||
| 1i84_S | 1184 | Cryo-Em Structure Of The Heavy Meromyosin Subfragme | 3e-21 | ||
| 3dtp_B | 973 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 3e-93 | ||
| 3dtp_B | 973 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 2e-21 | ||
| 3dtp_A | 971 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 4e-93 | ||
| 3dtp_A | 971 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 2e-21 | ||
| 3j04_A | 909 | Em Structure Of The Heavy Meromyosin Subfragment Of | 5e-93 | ||
| 3j04_A | 909 | Em Structure Of The Heavy Meromyosin Subfragment Of | 2e-21 | ||
| 1br2_A | 791 | Smooth Muscle Myosin Motor Domain Complexed With Mg | 1e-92 | ||
| 1br2_A | 791 | Smooth Muscle Myosin Motor Domain Complexed With Mg | 4e-18 | ||
| 1br1_A | 820 | Smooth Muscle Myosin Motor Domain-Essential Light C | 1e-92 | ||
| 1br1_A | 820 | Smooth Muscle Myosin Motor Domain-Essential Light C | 9e-21 | ||
| 2ycu_A | 995 | Crystal Structure Of Human Non Muscle Myosin 2c In | 5e-92 | ||
| 2ycu_A | 995 | Crystal Structure Of Human Non Muscle Myosin 2c In | 1e-17 | ||
| 2mys_A | 843 | Myosin Subfragment-1, Alpha Carbon Coordinates Only | 2e-88 | ||
| 2mys_A | 843 | Myosin Subfragment-1, Alpha Carbon Coordinates Only | 2e-23 | ||
| 1m8q_A | 840 | Molecular Models Of Averaged Rigor Crossbridges Fro | 2e-88 | ||
| 1m8q_A | 840 | Molecular Models Of Averaged Rigor Crossbridges Fro | 2e-23 |
| >pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 | Back alignment and structure |
|
| >pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 | Back alignment and structure |
| >pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 | Back alignment and structure |
| >pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 | Back alignment and structure |
| >pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 | Back alignment and structure |
| >pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 | Back alignment and structure |
| >pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 | Back alignment and structure |
| >pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 | Back alignment and structure |
| >pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 | Back alignment and structure |
| >pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 | Back alignment and structure |
| >pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 | Back alignment and structure |
| >pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 | Back alignment and structure |
| >pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 | Back alignment and structure |
| >pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 | Back alignment and structure |
| >pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 | Back alignment and structure |
| >pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 | Back alignment and structure |
| >pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 | Back alignment and structure |
| >pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 | Back alignment and structure |
| >pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 | Back alignment and structure |
| >pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 | Back alignment and structure |
| >pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 | Back alignment and structure |
| >pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 | Back alignment and structure |
| >pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 | Back alignment and structure |
| >pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 | Back alignment and structure |
| >pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 | Back alignment and structure |
| >pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 | Back alignment and structure |
| >pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 | Back alignment and structure |
| >pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 | Back alignment and structure |
| >pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 | Back alignment and structure |
| >pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 | Back alignment and structure |
| >pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 | Back alignment and structure |
| >pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 | Back alignment and structure |
| >pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 | Back alignment and structure |
| >pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 | Back alignment and structure |
| >pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 | Back alignment and structure |
| >pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 | Back alignment and structure |
| >pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 | Back alignment and structure |
| >pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 | Back alignment and structure |
| >pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 | Back alignment and structure |
| >pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 | Back alignment and structure |
| >pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 | Back alignment and structure |
| >pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 | Back alignment and structure |
| >pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 | Back alignment and structure |
| >pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 | Back alignment and structure |
| >pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 | Back alignment and structure |
| >pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 | Back alignment and structure |
| >pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 | Back alignment and structure |
| >pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 | Back alignment and structure |
| >pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 | Back alignment and structure |
| >pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 | Back alignment and structure |
| >pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 | Back alignment and structure |
| >pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 | Back alignment and structure |
| >pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 | Back alignment and structure |
| >pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 | Back alignment and structure |
| >pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 | Back alignment and structure |
| >pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 | Back alignment and structure |
| >pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 | Back alignment and structure |
| >pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 | Back alignment and structure |
| >pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 | Back alignment and structure |
| >pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 | Back alignment and structure |
| >pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 | Back alignment and structure |
| >pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 | Back alignment and structure |
| >pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 | Back alignment and structure |
| >pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 | Back alignment and structure |
| >pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 | Back alignment and structure |
| >pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 | Back alignment and structure |
| >pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 | Back alignment and structure |
| >pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 | Back alignment and structure |
| >pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 | Back alignment and structure |
| >pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 | Back alignment and structure |
| >pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 | Back alignment and structure |
| >pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 | Back alignment and structure |
| >pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 | Back alignment and structure |
| >pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 | Back alignment and structure |
| >pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 | Back alignment and structure |
| >pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 | Back alignment and structure |
| >pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 | Back alignment and structure |
| >pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 1151 bits (2978), Expect = 0.0
Identities = 381/1087 (35%), Positives = 564/1087 (51%), Gaps = 114/1087 (10%)
Query: 4 RKGSKVWVEDKDLAWVAAEVVSDSVGRHVQVLTATGKKFGVVFFFFSIILQVLAAPERVF 63
K ++VW+ D + W +AE++ D G K + L+ P+
Sbjct: 8 TKYARVWIPDPEEVWKSAELLKDY---------KPGDKVLQLRLEEGKDLEYCLDPKTKE 58
Query: 64 LRATDDDEEHGGVDDMTKLTYLNEPGVLYNLERRYALND-IYTYTGSILIAVNPFTKLPH 122
L + + G +D+T L+YL+EP VL+NL+ R+ + IYTY G +L+A+NP+ +LP
Sbjct: 59 LPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP- 117
Query: 123 LYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIM 182
+Y ++ Y G G++ PH+FAVA+ +Y+ M + ++QSI+VSGESGAGKT + K M
Sbjct: 118 IYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAM 177
Query: 183 QYLTFVGGRAAGDDRNVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRIS 242
+Y V G + NVE++VL SNP++E+ GNA+T RNDNSSRFGK++EI FD RI
Sbjct: 178 RYFATVSGS--ASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRII 235
Query: 243 GAAIRTYLLERSRVVQITDPERNYHCFYQLCASGRDAEK--YKLDHPSHFHYLNQSKVYE 300
GA +RTYLLE+SRVV + ERNYH FYQLCAS E +L + ++FHY Q
Sbjct: 236 GANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPV 295
Query: 301 LDGVSSAEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQK 360
+DG+ A+E + T++A ++GIS Q IFR LA ILHLGN+EF+ ++ DS I +
Sbjct: 296 IDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPPKH 354
Query: 361 SSFHLQMAADLFMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLF 420
L + DL D + LC R + T + IK + A+ +RDALAK +Y+ LF
Sbjct: 355 D--PLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLF 412
Query: 421 DWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKM 480
+W+V+ +N+++ + IGVLDIYGFE+F+ NSFEQFCIN+ANEKLQQ FN HVFK+
Sbjct: 413 NWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKL 472
Query: 481 EQEEYRREEINWSYIEFIDNQDV----------LDLIE---------------------- 508
EQEEY +E+I W+ I+F DNQ LDL++
Sbjct: 473 EQEEYMKEQIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHL 532
Query: 509 -----------------------KVTYQTNTFLDKNRDYVVVEHCNLLSSSK-CPFVAGL 544
KV YQ FL+KN+D V E +L SSK + L
Sbjct: 533 NKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPEL 592
Query: 545 FPVLSEESS--------------------------RSSYKFSSVASRFKQQLQALMETLN 578
F + S S +V +F+ L LMETLN
Sbjct: 593 FQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLN 652
Query: 579 STEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVRISLAGYPTRRTYSDFVDRFG 638
+T PHY+RC+KPN P F+ + QLR GVLE +RIS AG+P+R TY +F R+
Sbjct: 653 ATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYR 712
Query: 639 LLALEFMDESYEEKALTEKILRKLKL--ENFQLGRTKVFLRAGQIGILDSRRAEVLDSAA 696
+L + D + K + +L KL L + +Q G+TK+F RAGQ+ L+ RA+ L +A
Sbjct: 713 VLMKQ-KDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAAC 771
Query: 697 RCIQHRWRTFIAHRNFVSIRAAAFVLQAQCRGCLARKLYGVKRETAAAISLQKYVRRWLS 756
IQ R ++ + ++ +R AA +Q RG AR R T AAI +QK+ R ++
Sbjct: 772 IRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVV 831
Query: 757 RHAFLKLSLAAIVIQSNIRGFSIRERFLHRKRHKAATVIQACWRMCKFRSAFQHHQTSII 816
R + + A I +Q+ +RG+ +R ++ R + +IQ R R + +I+
Sbjct: 832 RKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIV 891
Query: 817 AIQCRWRQKLAKRELRRLKQVANEAGALRLAKNKLERQLEDLTWRVQLEKKL-------R 869
+QC +R+ +AKREL++LK A + LE ++ L ++ + K
Sbjct: 892 YLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKM 951
Query: 870 VSTEEAKSVEISKLQKLLESLNLELDAAKLAT---INECNKNAMLQNQLELSLKEKSALE 926
+ E S E KL+ +E L + + AK AT ++ + A L+ +L + EK +E
Sbjct: 952 NNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIE 1011
Query: 927 RELVAM-AEIRKENAVLKSSLDSLEKKNSTLELELIKAQKENNNTIEKLREVEQKCSSLQ 985
E + + LK L+ + L + KE T+EK E K L
Sbjct: 1012 EWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETKQLELD 1071
Query: 986 QNMQSLE 992
N + L
Sbjct: 1072 LNDERLR 1078
|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 | Back alignment and structure |
|---|
| >1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 | Back alignment and structure |
|---|
| >4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 | Back alignment and structure |
|---|
| >2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 | Back alignment and structure |
|---|
| >2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 | Back alignment and structure |
|---|
| >2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} Length = 419 | Back alignment and structure |
|---|
| >3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} Length = 386 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 | Back alignment and structure |
|---|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} Length = 189 | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} Length = 189 | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} Length = 189 | Back alignment and structure |
|---|
| >2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1 Length = 154 | Back alignment and structure |
|---|
| >3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus} Length = 101 | Back alignment and structure |
|---|
| >2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1 Length = 147 | Back alignment and structure |
|---|
| >3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A Length = 101 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1476 | ||||
| d1d0xa2 | 712 | c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain | 0.0 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 0.0 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 4e-06 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 4e-05 | |
| d1w7ja2 | 730 | c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick | 0.0 | |
| d1br2a2 | 710 | c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick | 0.0 | |
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 0.0 | |
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 6e-06 | |
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 2e-05 | |
| d1lkxa_ | 684 | c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli | 1e-159 | |
| d1lkxa_ | 684 | c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli | 1e-55 | |
| d1w7ja1 | 58 | b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal d | 5e-05 |
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Dictyostelium discoideum [TaxId: 44689]
Score = 647 bits (1670), Expect = 0.0
Identities = 284/678 (41%), Positives = 411/678 (60%), Gaps = 70/678 (10%)
Query: 75 GVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKG 134
GV+DM++L+YLNEP V +NL RY + IYTY+G L+AVNPF ++P +Y M++ +KG
Sbjct: 40 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 98
Query: 135 APFGELSPHVFAVADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAG 194
E++PH+FA++D +YR+M+ + Q+QS+L++GESGAGKTE TK ++QYL V GR
Sbjct: 99 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 158
Query: 195 DDRN-VEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLER 253
+ +EQQ+L++NP+LEAFGNA+T RN+NSSRFGKF+EIQF+ G ISGA+I++YLLE+
Sbjct: 159 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 218
Query: 254 SRVVQITDPERNYHCFYQLCASGRDAEKYKL--DHPSHFHYLNQSKVYELDGVSSAEEYM 311
SRVV ++ ERNYH FYQL A EK L P F+YLNQS ++ GVS +EE+
Sbjct: 219 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 278
Query: 312 KTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADL 371
T++AMDIVG S E+Q +IF+ +A ILHLGNI+F G + +V+KD+ L A+ +
Sbjct: 279 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKT---ALNAASTV 334
Query: 372 FMCDVNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRSV 431
F + ++L L I + + L+ + +SRDAL K +Y RLF WLV+KIN +
Sbjct: 335 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 394
Query: 432 GQDMNSQMQIGVLDIYGFESFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEIN 491
Q+ IGVLDI GFE FK NSFEQ CIN+ NEKLQQ FN H+FK+EQEEY +E+IN
Sbjct: 395 CQE-RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 453
Query: 492 WSY-------------IEFIDNQDVLDLIE------------------------------ 508
W++ I+ +L L++
Sbjct: 454 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 513
Query: 509 ---------------KVTYQTNTFLDKNRDYVVVEHCNLLSSSKCPFVAGLFP-VLSEES 552
+V Y+ +L+KN+D + + S V LF
Sbjct: 514 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 573
Query: 553 SRSSYKFSSVASRFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGG 612
++ F +VA+++K+QL +LM TL +T PH++RC+ PN+ P K E+ +L QLRC G
Sbjct: 574 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 633
Query: 613 VLEAVRISLAGYPTRRTYSDFVDRFGLLALEFMDESYEEKALTEKILRKLKL--ENFQLG 670
VLE +RI+ G+P R Y+DFV R+ LLA ++ + + T+ +L+ L + E ++ G
Sbjct: 634 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 693
Query: 671 RTKVFLRAGQIGILDSRR 688
TK+F RAGQ+ ++ R
Sbjct: 694 ITKIFFRAGQLARIEEAR 711
|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 | Back information, alignment and structure |
|---|
| >d1w7ja1 b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 58 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1476 | |||
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 100.0 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1d0xa2 | 712 | Myosin S1, motor domain {Dictyostelium discoideum | 100.0 | |
| d1br2a2 | 710 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1lkxa_ | 684 | Myosin S1, motor domain {Dictyostelium discoideum, | 100.0 | |
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 97.88 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 97.79 | |
| d1w7ja1 | 58 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 97.79 | |
| d2mysa1 | 46 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 97.15 | |
| d1br2a1 | 46 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 96.78 | |
| d1kk8a1 | 48 | Myosin S1 fragment, N-terminal domain {Bay scallop | 96.74 | |
| d1iqpa2 | 231 | Replication factor C {Archaeon Pyrococcus furiosus | 94.3 | |
| d1m7ga_ | 208 | Adenosine-5'phosphosulfate kinase (APS kinase) {Fu | 93.24 | |
| d1njfa_ | 239 | delta prime subunit of DNA polymerase III, N-domai | 92.39 | |
| d1sxjd2 | 237 | Replication factor C2 {Baker's yeast (Saccharomyce | 92.35 | |
| d1sxjb2 | 224 | Replication factor C4 {Baker's yeast (Saccharomyce | 90.9 | |
| d1m8pa3 | 183 | ATP sulfurylase C-terminal domain {Fungus (Penicil | 89.97 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 89.67 | |
| d1rz3a_ | 198 | Hypothetical protein rbstp0775 {Bacillus stearothe | 89.31 | |
| d1g6oa_ | 323 | Hexameric traffic ATPase, HP0525 {Helicobacter pyl | 89.12 | |
| d1sxjc2 | 227 | Replication factor C3 {Baker's yeast (Saccharomyce | 88.97 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 88.84 | |
| d1um8a_ | 364 | ClpX {Helicobacter pylori [TaxId: 210]} | 88.76 | |
| d2i3ba1 | 189 | Cancer-related NTPase, C1orf57 {Human (Homo sapien | 87.3 | |
| d1qhxa_ | 178 | Chloramphenicol phosphotransferase {Streptomyces v | 86.84 | |
| d1khta_ | 190 | Adenylate kinase {Archaeon Methanococcus voltae [T | 86.32 | |
| d1ye8a1 | 178 | Hypothetical kinase-like protein Aq_1292 {Aquifex | 85.82 | |
| d1knqa_ | 171 | Gluconate kinase {Escherichia coli [TaxId: 562]} | 85.58 | |
| d1rkba_ | 173 | Adenylate kinase {Human (Homo sapiens), isoenzyme | 85.38 | |
| d1x6va3 | 195 | Adenosine-5'phosphosulfate kinase (APS kinase) {Hu | 85.04 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 84.79 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 84.78 | |
| d1qf9a_ | 194 | UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 | 84.77 | |
| d1lvga_ | 190 | Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 | 84.18 | |
| d1ly1a_ | 152 | Polynucleotide kinase, kinase domain {Bacteriophag | 83.85 | |
| d1nksa_ | 194 | Adenylate kinase {Archaeon Sulfolobus acidocaldari | 82.54 | |
| d1kaga_ | 169 | Shikimate kinase (AroK) {Escherichia coli [TaxId: | 82.15 | |
| d1gkya_ | 186 | Guanylate kinase {Baker's yeast (Saccharomyces cer | 82.11 | |
| d1xjca_ | 165 | Molybdopterin-guanine dinucleotide biosynthesis pr | 81.96 | |
| d1a5ta2 | 207 | delta prime subunit of DNA polymerase III, N-domai | 81.62 | |
| d1sxje2 | 252 | Replication factor C5 {Baker's yeast (Saccharomyce | 81.22 | |
| d1sxja2 | 253 | Replication factor C1 {Baker's yeast (Saccharomyce | 80.97 | |
| d1e6ca_ | 170 | Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax | 80.42 | |
| d1uj2a_ | 213 | Uridine-cytidine kinase 2 {Human (Homo sapiens) [T | 80.25 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 80.2 |
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]
Probab=100.00 E-value=0 Score=1511.89 Aligned_cols=655 Identities=37% Similarity=0.666 Sum_probs=600.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHH
Q ss_conf 79988788967433687889244799999994318843235960899849988999999889998108998999804888
Q 000467 67 TDDDEEHGGVDDMTKLTYLNEPGVLYNLERRYALNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFA 146 (1476)
Q Consensus 67 ~~~~~~~~~~~Dl~~L~~l~e~~vl~~L~~R~~~~~iYT~~G~~LiaiNP~~~l~~~y~~~~~~~y~~~~~~~~~PHifa 146 (1476)
.||. ..+++|||+.|++||||+|||+|+.||.+++||||+|++|||||||+.+| +|++++++.|+++..+++||||||
T Consensus 31 ~np~-~~d~veDl~~L~~lnE~~vL~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~-ly~~~~~~~y~~~~~~~~pPHifa 108 (794)
T d2mysa2 31 MNPP-KYDKIEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLP-VYNPKVVLAYRGKKRQEAPPHIFS 108 (794)
T ss_dssp CCCT-TSSSCSBGGGCSCCCHHHHHHHHHHTTTTTCCEEECSSCEEEECCSSCCG-GGCTTHHHHTTTCCTTSSCSCHHH
T ss_pred CCCC-CCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCC-CCCHHHHHHHCCCCCCCCCCCHHH
T ss_conf 9986-33476310078879889999999999768996245788899978998899-999999999708988999980899
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC--------CCCCCHHHHHHHHCHHHHHHCCCCC
Q ss_conf 99999999881299749997287899625899999999985307778--------8877499999842019875315434
Q 000467 147 VADASYRAMISEHQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAA--------GDDRNVEQQVLESNPLLEAFGNART 218 (1476)
Q Consensus 147 vA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~k~~~~yla~~~~~~~--------~~~~~ie~~il~snpilEafGnAkT 218 (1476)
||++||+.|..+++||||||||||||||||++|++|+||+++++++. .....++++|+++||||||||||||
T Consensus 109 iA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il~yL~~~~~~~~~~~~~~~~~~~~~i~~~i~~~npiLEAFGNAkT 188 (794)
T d2mysa2 109 ISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGNAKT 188 (794)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEECTTSCHHHHHHHHHHHHHHHTCCCC-----------CCHHHHHHHHHHHHHHHHEECC
T ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999987499807999717988789999999999998707787753111355567499999976269998548755
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEHHCCCCH--HHHHHCCCC-CCCCCCCCCC
Q ss_conf 5789888553079998679996222026300034542011159997311500012492--888522389-9997633558
Q 000467 219 VRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASG--RDAEKYKLD-HPSHFHYLNQ 295 (1476)
Q Consensus 219 ~~N~nSSRfGk~~~l~f~~~~~i~ga~i~~yLLEksRvv~~~~~ErnfHiFYql~~~~--~~~~~~~l~-~~~~~~yl~~ 295 (1476)
++|+||||||||++|+||.+|.|+||+|.+|||||||||+|++|||||||||||++|+ ++++.+.|. ++.+|+||++
T Consensus 189 ~~N~NSSRFgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g~~~~~~~~~~l~~~~~~y~yl~~ 268 (794)
T d2mysa2 189 VRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYHYVSE 268 (794)
T ss_dssp SSCSSEECSEEEEEEEECSSSSEEECCEEEECCCGGGGTCCCTTCCCBHHHHHHTTCSSHHHHHHHTCCSCGGGCGGGCS
T ss_pred CCCCCHHHHHEEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCC
T ss_conf 66687201110136677799978668999985378537734765441999999983999999998626898777233179
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 99423489891999999999887808897769999999999997447267069988864325754379999999870999
Q 000467 296 SKVYELDGVSSAEEYMKTKRAMDIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEHDSSVIKDQKSSFHLQMAADLFMCD 375 (1476)
Q Consensus 296 ~~~~~~~~~~d~~~f~~~~~al~~lg~~~~~~~~i~~ilaaiLhlGni~f~~~~~~~~~~~~~~~~~~~l~~~a~LLgv~ 375 (1476)
|. ..++++||+++|..+..||..|||+++++..||+|||||||||||+|......+.+.+.+.. .++.+|.||||+
T Consensus 269 ~~-~~~~~~~d~~~f~~~~~al~~lg~s~~e~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~~---~~~~~a~LLgi~ 344 (794)
T d2mysa2 269 GE-ITVPSIDDQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTE---VADKAAYLMGLN 344 (794)
T ss_dssp SC-CCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSCCEEESCSS---HHHHHHHHHTCC
T ss_pred CC-CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHH---HHHHHHHHHCCC
T ss_conf 98-04699776999999999999809999999999998888751011167524774212236637---999999881979
Q ss_pred HHHHHHHHHHCEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 99999988152010258669841898789996999999999999999998522120567888607653114676667889
Q 000467 376 VNLLLATLCTRTIQTREGSIIKALDCNAAVASRDALAKTVYSRLFDWLVEKINRSVGQDMNSQMQIGVLDIYGFESFKHN 455 (1476)
Q Consensus 376 ~~~l~~~l~~r~~~~~~~~~~~~~~~~~a~~~rd~lak~lY~~LF~wiv~~iN~~l~~~~~~~~~IgiLDi~GFE~f~~N 455 (1476)
+++|.++|+++.+.++++.+++++++.+|..+||+|||+||++||+|||.+||.++.+......+||||||||||+|+.|
T Consensus 345 ~~~L~~~L~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~~~~~~IgILDifGFE~f~~N 424 (794)
T d2mysa2 345 SAELLKALCYPRVGVGNEAVTKGETVSEVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQPRQYFIGVLDIAGFEIFDFN 424 (794)
T ss_dssp HHHHHHHHHSCBCCCSSSCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCCCEEEEEEEEECCCCCSSB
T ss_pred HHHHHCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCC
T ss_conf 88953041056898336650463889999889998999999999999998766320667776517898532555544566
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCC
Q ss_conf 65787864435688756668767875999863089843345468388999852114654312322553124411114789
Q 000467 456 SFEQFCINFANEKLQQHFNEHVFKMEQEEYRREEINWSYIEFIDNQDVLDLIEKVTYQTNTFLDKNRDYVVVEHCNLLSS 535 (1476)
Q Consensus 456 sfeQlciNyaNE~Lq~~f~~~~f~~eq~~y~~E~i~~~~i~f~dn~~~idlie~~p~Gil~lLd~~~~~~~~ee~~~p~~ 535 (1476)
|||||||||||||||++|++++|+.||++|.+|||+|..|+|+||.+++++++.+|.|||++|| |||++|++
T Consensus 425 sfEQLcINyaNEkLQq~f~~~~F~~Eq~~Y~~EgI~~~~i~~~~n~~~~~~l~~kp~Gil~lLd--------ee~~~~~~ 496 (794)
T d2mysa2 425 SFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILE--------EECMFPKA 496 (794)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCSTHHHHHHHHHHHSTTSHHHHHH--------HHTTCTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH--------HHCCCCCC
T ss_conf 3889999999999999999999998999997548776567777987999999848532799998--------86147665
Q ss_pred CCHHHHHHHHHHHC-----------------------------------------C-----------C------------
Q ss_conf 96004988523200-----------------------------------------1-----------1------------
Q 000467 536 SKCPFVAGLFPVLS-----------------------------------------E-----------E------------ 551 (1476)
Q Consensus 536 ~~~~f~~kl~~~~~-----------------------------------------~-----------~------------ 551 (1476)
||++|+.|+++.+. + .
T Consensus 497 td~~f~~kl~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~ 576 (794)
T d2mysa2 497 TDTSFKNKLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFAT 576 (794)
T ss_dssp CHHHHHHHHHHHHBTTBSSEECCCCC---CCCSEEEECSSCEEEECCSSHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSC
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEHHCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHH
T ss_conf 18899999998735788563688756787887168983076360441265775558443799999986798899986640
Q ss_pred -------------CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHH
Q ss_conf -------------1279876555799999999999998713599258842899999999999357998831157146899
Q 000467 552 -------------SSRSSYKFSSVASRFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENPSILHQLRCGGVLEAVR 618 (1476)
Q Consensus 552 -------------~~~~~~~~~tv~~~f~~~l~~L~~~l~~t~~h~irCIkpN~~~~~~~fd~~~v~~QLr~~gvle~ir 618 (1476)
..+.+.++.||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+||
T Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~Tv~~~fr~sL~~L~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvLE~vr 656 (794)
T d2mysa2 577 YGGEAEGGGGKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIR 656 (794)
T ss_dssp C--------------------CCSHHHHHHHHHHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHSHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHH
T ss_conf 24433356677687777875240899999999999998756898688864688655876435699999998627899999
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHCCCC--CCCCCCCEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 98624986556378999974232210136--814999999999981868--73124520001345444122356542346
Q 000467 619 ISLAGYPTRRTYSDFVDRFGLLALEFMDE--SYEEKALTEKILRKLKLE--NFQLGRTKVFLRAGQIGILDSRRAEVLDS 694 (1476)
Q Consensus 619 i~~~gyp~r~~~~~F~~ry~~l~~~~~~~--~~~~~~~~~~il~~~~~~--~~~iG~TkVFlr~~~~~~Le~~r~~~l~~ 694 (1476)
|++.|||+|++|.+|+.||++|+|..... ..|.++.|+.|+..++++ .|++|+||||||++.+..||.+|.+.+..
T Consensus 657 i~r~Gyp~R~~~~eF~~RY~~L~~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~iGkTKVFlr~~~~~~LE~~r~~~l~~ 736 (794)
T d2mysa2 657 ICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTKVFFKAGLLGLLEEMRDDKLAE 736 (794)
T ss_dssp HHTTSCCCEEEHHHHHHHHGGGTTTC------CCTTHHHHHHTTSSSCCSSSEEEETTEEEECTTHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHH
T ss_conf 99668986364999999999858342445566899999999999669781358717975986743999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHCCCCHHC
Q ss_conf 899999999956989779865---67899988887410100110
Q 000467 695 AARCIQHRWRTFIAHRNFVSI---RAAAFVLQAQCRGCLARKLY 735 (1476)
Q Consensus 695 ~a~~IQ~~~R~~l~Rk~~~~~---r~a~i~iQ~~~Rg~laR~~~ 735 (1476)
+++.||++||||++|++|+++ +.|+++||++||||++|+.|
T Consensus 737 ~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~ 780 (794)
T d2mysa2 737 IITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW 780 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999999999999998236
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja1 b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d2mysa1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1br2a1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a1 b.34.3.1 (A:29-76) Myosin S1 fragment, N-terminal domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
| >d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} | Back information, alignment and structure |
|---|
| >d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
| >d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
| >d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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| >d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
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| >d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
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