Citrus Sinensis ID: 000517

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------145
MAQMIGTDEIESVRIELAEIGRSLRSSFRLPTSSYRSSSAISSRKEDTDVEHALLWAEIERLPTYDRLKASLFDVNSHGNLVDNQGKLVIDVTKLGALERHVFIEKLIKHIEHDNLQLLWKIRKRVDKVGIKLPTIEVRYKNLCVEAKCEVVHGKPLPTLWNSFKGMISVLPKLSGYKSLEAKINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELLVPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGSLYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQFILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPRWQKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQESEDSSYGEPVKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKHSSQVIEYFEGISGVPKIRNNYNPATWVIEVTSTSAEAELCVDFAQIFRESVLYENNRELVKQLNTPPPGSKDLHFPTRFSRNFWGQFKSCLWKLHLSYWRSPSYNLMRIMHTATASLLFGVLFWDHGQKLDNQQDLFNIVGSSYLAVVFLGINNCSSVIPNVARERTVMYREGFAGMYSPWAYALAQVTVEIPYLLIQALSYVIIGYPMIGYYWSAYKLFWNFYGMFCTMMFYNYLGMLLVSLTPNSMIASILSSVCYTLFNLFAGFLIPGPKIPKWWIWMYYMMPTSWALNAMVTSQYGDIDKEMIVFGETKKLSSFIQDYFGFHHDRLPITAAVLIIYPLVLAFLFAFCIERLNFLRR
cccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHccccccccccccccccEEEccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccEEEEEcEEEEEEEEEccccccccHHHHHHHHHHHHHHccccccccccccccccccEEECccCEEEECccccccHHHHHHHHHccccccccEEEEEEEccccccccccccCEEEEcccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHcccEEccEEccccccHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHcccEEEEcccCEEECccHHHHHHHHHHccccccccccccccccccccHHHHcccccccccccccccHHHHHHHHHcccHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHcHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEcEEEEEcccccccccccccccccccccccEEEEcccEEEccccccccHHHHHHHHcccccccEEEEEEEEcccccccccccccccHHHcccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccccccccccHHHHccHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHcccccccccccccccHHHHHHHHcccccccccccHHHHHcccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEcccHHHHHHHHHHHHHccccccccccccccccHHHHHHcccccccccccccEEHHHHHHHHHHHHHHHHHHHHHcccc
*************************************************VEHALLWAEIERLPTYDRLKASLFDVNSHG****NQGKLVIDVTKLGALERHVFIEKLIKHIEHDNLQLLWKIRKRVDKVGIKLPTIEVRYKNLCVEAKCEVVHGKPLPTLWNSFKGMISVLPKLSGYKSLEAKINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVRETVDFSARCQGVGSREET************IVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELLVPY*******NAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGSLYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQFILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPRWQKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLK**********************************************RMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKHSSQVIEYFEGISGVPKIRNNYNPATWVIEVTSTSAEAELCVDFAQIFRESVLYENNRELVK***********LHFPTRFSRNFWGQFKSCLWKLHLSYWRSPSYNLMRIMHTATASLLFGVLFWDHGQKLDNQQDLFNIVGSSYLAVVFLGINNCSSVIPNVARERTVMYREGFAGMYSPWAYALAQVTVEIPYLLIQALSYVIIGYPMIGYYWSAYKLFWNFYGMFCTMMFYNYLGMLLVSLTPNSMIASILSSVCYTLFNLFAGFLIPGPKIPKWWIWMYYMMPTSWALNAMVTSQYGDIDKEMIVFGETKKLSSFIQDYFGFHHDRLPITAAVLIIYPLVLAFLFAFCIERLNFLRR
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MAQMIGTDEIESVRIELAEIGRSLRSSFRLPTSSYRSSSAISSRKEDTDVEHALLWAEIERLPTYDRLKASLFDVNSHGNLVDNQGKLVIDVTKLGALERHVFIEKLIKHIEHDNLQLLWKIRKRVDKVGIKLPTIEVRYKNLCVEAKCEVVHGKPLPTLWNSFKGMISVLPKLSGYKSLEAKINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELLVPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGSLYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQFILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPRWQKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQESEDSSYGEPVKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKHSSQVIEYFEGISGVPKIRNNYNPATWVIEVTSTSAEAELCVDFAQIFRESVLYENNRELVKQLNTPPPGSKDLHFPTRFSRNFWGQFKSCLWKLHLSYWRSPSYNLMRIMHTATASLLFGVLFWDHGQKLDNQQDLFNIVGSSYLAVVFLGINNCSSVIPNVARERTVMYREGFAGMYSPWAYALAQVTVEIPYLLIQALSYVIIGYPMIGYYWSAYKLFWNFYGMFCTMMFYNYLGMLLVSLTPNSMIASILSSVCYTLFNLFAGFLIPGPKIPKWWIWMYYMMPTSWALNAMVTSQYGDIDKEMIVFGETKKLSSFIQDYFGFHHDRLPITAAVLIIYPLVLAFLFAFCIERLNFLRR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Pleiotropic drug resistance protein 12 May be a general defense protein.probableQ5Z9S8
Pleiotropic drug resistance protein 4 May be a general defense protein.probableQ8GU89
Pleiotropic drug resistance protein 3 May be a general defense protein.probableQ5W274

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2IHY, chain A
Confidence level:confident
Coverage over the Query: 861-1085
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Template: 3GFO, chain A
Confidence level:confident
Coverage over the Query: 877-1085
View the alignment between query and template
View the model in PyMOL
Template: 3OZX, chain A
Confidence level:confident
Coverage over the Query: 817-1057
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View the model in PyMOL
Template: 2GHI, chain A
Confidence level:confident
Coverage over the Query: 877-1081
View the alignment between query and template
View the model in PyMOL
Template: 4F4C, chain A
Confidence level:probable
Coverage over the Query: 763-839,852-1084
View the alignment between query and template
View the model in PyMOL
Template: 3G5U, chain A
Confidence level:probable
Coverage over the Query: 877-925,943-1084
View the alignment between query and template
View the model in PyMOL
Template: 2R6G, chain A
Confidence level:probable
Coverage over the Query: 879-1123
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Template: 3BK7, chain A
Confidence level:probable
Coverage over the Query: 817-923,938-1054
View the alignment between query and template
View the model in PyMOL