Citrus Sinensis ID: 000572

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410----

MSGLKEITAITEADFLQGTHRNTLFLNGNSAIKRKNLLWGALSNQNSKFGISNRKSVSLKCCAQSKPRAVVSGDKTASVDEQPNLSEKPAQEVVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS

ccccccccHHHHHHHccccccccEEcccccHHHHHHHHcccccccccccccccccEEEEECccccccccEEcccccccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHcccccEEEEEEEEEEEccccccHHHHHHHHHHccccccccccccccHHHHHHcccccEEEEEEEcccccccHHHHHHHHHHHHcccccccEEEEEEEEEEEEcccccHHHHHHHHHHccccccccccccccccccccccccccCEEEcccccHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccCEEEEEccccccccccccccccEEEEcccccHHHHHHHHHHHHHHcccccEEEEECcccccccccccccccccccccccccccccCEEEEEEccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccHHHHHHHcccccccccccccccccccEEEEEcECccccccccccccEEEEEEECccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEccccccccccHHHHcccccCEEEccccccccccccHHHHHHcccccccEEEcccccHHHHHHHHHHHcccEEEEEEEEcccEEEEEEcccHcccccccccccccccCEEEEEEcccccccCEEEEECccccccccccccccHHHHHHHHHcccccccccccEEccccccccEEEEEccccccccccccEEEEEEEcccCEEEEEECccccccccccHHHHHHHHHHHHHHHHHHcccccccccEEEEccccccccccccHHHHHHHHHHHHHHHHHccccccccccccEEEEcccCEEECcccEEEEEEECcccccccccccccccccCEEEEEEccccccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccEEEEECcccccHHHHHHHHHccccEEEEEEcccccccHHHHHccccccEEEEEEcccHHHHHHHHHHccccEEEEEEEccccEEEEEEccEEEEEccHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccCEccccccccccccccccccEEEEEccccccHHHHHHHHHHHccccCEEEEEccccccccccccCEEEEEcccccccccccccHHHHHHHHccHHHHHHHHHHHcccccEEEECccHHHHHHHccccccccccccccccccccccCEEccccccEEEEEEEEEEcccccccccccccccEEEEEECcccccccccHHHHHHHHHcccEEEEEEcccccccccccccccccccccEEEEcccccEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHcc

******ITAITEADFLQGTHRNTLFLNGNSAIKRKNLLWGALSNQNSKFGISNRKSVSLKCC*****************************EVVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGA************LDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS

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MSGLKEITAITEADFLQGTHRNTLFLNGNSAIKRKNLLWGALSNQNSKFGISNRKSVSLKCCAQSKPRAVVSGDKTASVDEQPNLSEKPAQEVVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFExxxxxxxxxxxxxxxxxxxxxCEPLWKLSFTPSLTDEKYMNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial	Essential to the male gametophyte development.	confident	Q9M8D3
Phosphoribosylformylglycinamidine synthase		probable	Q54JC8
Phosphoribosylformylglycinamidine synthase		probable	Q5SUR0

Prediction of Enzyme Commission Number

EC Number	Description	Confidence Level
6.-.-.-	Ligases.	probable
6.3.-.-	Forming carbon-nitrogen bonds.	probable
6.3.5.-	Carbon--nitrogen ligases with glutamine as amido-N-donor.	probable
6.3.5.3	Phosphoribosylformylglycinamidine synthase.	probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3D54, chain D
Confidence level:confident
Coverage over the Query: 1144-1255,1272-1339,1351-1379
View the alignment between query and template
View the model in PyMOL

Template: 1VK3, chain A
Confidence level:confident
Coverage over the Query: 284-341,356-367,388-453,479-551,568-696,710-742,758-937,960-1051
View the alignment between query and template
View the model in PyMOL

Template: 3VIU, chain A
Confidence level:probable
Coverage over the Query: 360-439,451-552,576-725,738-1067
View the alignment between query and template
View the model in PyMOL

Template: 1VK3, chain A
Confidence level:probable
Coverage over the Query: 284-341,356-367,388-453,479-551,568-696,710-742,758-937,960-1051
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID	Alignment Graph	Confidence Level	View Alignment and Template
Query
3ugj, chain A		very confident	Alignment \| Template Structure