Citrus Sinensis ID: 000572
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1414 | 2.2.26 [Sep-21-2011] | |||||||
| Q9M8D3 | 1407 | Probable phosphoribosylfo | yes | no | 0.987 | 0.992 | 0.805 | 0.0 | |
| Q54JC8 | 1355 | Phosphoribosylformylglyci | yes | no | 0.920 | 0.960 | 0.527 | 0.0 | |
| O15067 | 1338 | Phosphoribosylformylglyci | yes | no | 0.927 | 0.979 | 0.518 | 0.0 | |
| Q5SUR0 | 1337 | Phosphoribosylformylglyci | yes | no | 0.925 | 0.979 | 0.516 | 0.0 | |
| P35421 | 1354 | Phosphoribosylformylglyci | yes | no | 0.918 | 0.959 | 0.468 | 0.0 | |
| Q19311 | 1324 | Probable phosphoribosylfo | yes | no | 0.898 | 0.959 | 0.452 | 0.0 | |
| Q3IHZ2 | 1296 | Phosphoribosylformylglyci | yes | no | 0.847 | 0.925 | 0.390 | 0.0 | |
| P74881 | 1295 | Phosphoribosylformylglyci | yes | no | 0.848 | 0.926 | 0.390 | 0.0 | |
| Q8Z4L6 | 1295 | Phosphoribosylformylglyci | N/A | no | 0.851 | 0.929 | 0.388 | 0.0 | |
| Q57LE6 | 1295 | Phosphoribosylformylglyci | yes | no | 0.848 | 0.926 | 0.389 | 0.0 |
| >sp|Q9M8D3|PUR4_ARATH Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=At1g74260 PE=1 SV=3 | Back alignment and function desciption |
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Score = 2379 bits (6166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1133/1406 (80%), Positives = 1259/1406 (89%), Gaps = 10/1406 (0%)
Query: 9 AITEADFLQGTHRNTLFLNGNSAIKRKNLLWGALSNQNSKFGISNRKSVSLKCCAQ-SKP 67
A A FL G++R + L +S + LWG++ + S+ ++ K+VSL+C AQ +KP
Sbjct: 6 ATRAALFLNGSNRQAMLLQRSSMSQ----LWGSVRMRTSRLSLNRTKAVSLRCSAQPNKP 61
Query: 68 RAVVSGDKTASVDEQPNLSEKPAQEVVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKT 127
+A VS + DE P+L EKPA EV+HFYR+PL+Q+SA AELLK+VQ KISNQIV L T
Sbjct: 62 KAAVSTGSFVTADELPSLVEKPAAEVIHFYRVPLIQESANAELLKAVQTKISNQIVSLTT 121
Query: 128 EHCFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSF 187
E FNIGL+S++ +KL VLKW+LQETYEPENLGT+SFLE+KKQ+GL AVIVEVGPRLSF
Sbjct: 122 EQSFNIGLESKLKDEKLSVLKWILQETYEPENLGTDSFLERKKQEGLHAVIVEVGPRLSF 181
Query: 188 TTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTE 247
TTAWS NAVSICR CGL EVTRLERSRRYLLFSK L +NQI +FAAMVHDRMTECVYT+
Sbjct: 182 TTAWSTNAVSICRACGLDEVTRLERSRRYLLFSKEPLLENQIKEFAAMVHDRMTECVYTQ 241
Query: 248 KLTSFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTT 307
KL SFET+VVPEEV++VPVME GRKALEEINQEMGLAFDEQDLQYYTRLF+EDIKR+PT
Sbjct: 242 KLVSFETNVVPEEVKYVPVMEKGRKALEEINQEMGLAFDEQDLQYYTRLFREDIKRDPTN 301
Query: 308 VELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAI 367
VELFDIAQSNSEHSRHWFF G +VIDGKPM ++LMQIVKST +AN NNSVIGFKDNSSAI
Sbjct: 302 VELFDIAQSNSEHSRHWFFAGNMVIDGKPMDKSLMQIVKSTWEANRNNSVIGFKDNSSAI 361
Query: 368 KGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHA 427
+GF V QLRP+ PGS C L S++DLD+LFTAETHNFPCAVAPYPGAETGAGGRIRDTHA
Sbjct: 362 RGFLVNQLRPLLPGSVCLLDVSARDLDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHA 421
Query: 428 TGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKF 487
TGRGSFVVAST+GYCVGNLN+EGSYAPWED SF YPSNLASPLQILIDASNGASDYGNKF
Sbjct: 422 TGRGSFVVASTSGYCVGNLNMEGSYAPWEDSSFQYPSNLASPLQILIDASNGASDYGNKF 481
Query: 488 GEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPA 547
GEP+IQGYTRTFGMRLPSG RREWLKPIMFS GIGQIDH HI+KGEP++GMLVVKIGGPA
Sbjct: 482 GEPMIQGYTRTFGMRLPSGDRREWLKPIMFSAGIGQIDHTHITKGEPEVGMLVVKIGGPA 541
Query: 548 YRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQ 607
YRIGMGGGAASSMVSGQNDA+LDFNAVQRGDAEM+QKLYRVVRACIEMGE NPIISIHDQ
Sbjct: 542 YRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMSQKLYRVVRACIEMGEKNPIISIHDQ 601
Query: 608 GAGGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQS 667
GAGGNCNVVKEIIYP+GAEIDIRA++VGDHT+SVLEIWGAEYQEQDA+LVK ESR++LQS
Sbjct: 602 GAGGNCNVVKEIIYPQGAEIDIRAVVVGDHTMSVLEIWGAEYQEQDAILVKAESREILQS 661
Query: 668 ICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTF 727
IC+RER+SMAVIGTI+G GR L+DS A KC GLPPPPPAVDLELE+VLGDMP+KTF
Sbjct: 662 ICKRERLSMAVIGTINGGGRCTLIDSTAAAKCSKEGLPPPPPAVDLELEKVLGDMPKKTF 721
Query: 728 EFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPL 787
+F+ AREPLDIAPGIT+MD+LKRVLRLPSV SKRFLTTKVDRCVTGLVAQQQTVGPL
Sbjct: 722 KFNRIAYAREPLDIAPGITLMDALKRVLRLPSVSSKRFLTTKVDRCVTGLVAQQQTVGPL 781
Query: 788 QITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSH 847
QITLADVAVIAQT+TDLTGGACAIGEQPIKGLL+PKAMARLAVGEALTNLVWAKVT+LS
Sbjct: 782 QITLADVAVIAQTFTDLTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTALSD 841
Query: 848 VKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPG 907
VKASGNWMYAAKL+GEG+AMYDAA AL+EAMIELGIAIDGGKDSLSMAA++ GEVVKAPG
Sbjct: 842 VKASGNWMYAAKLEGEGSAMYDAAIALSEAMIELGIAIDGGKDSLSMAAHADGEVVKAPG 901
Query: 908 SLVISVYVTCPDITKTVTPDLKL-GDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPD 966
+LVIS YVTCPDITKTVTPDLKL GDDGILLH+DLAKGKRRLGGSALAQVF Q+GN+ PD
Sbjct: 902 NLVISAYVTCPDITKTVTPDLKLGGDDGILLHVDLAKGKRRLGGSALAQVFGQIGNDCPD 961
Query: 967 LEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSL 1026
L+DVPYLK VF+ VQ LI + LVS GHDISDGGL+V LEM+FAGN GI LDL S G SL
Sbjct: 962 LDDVPYLKNVFDGVQALIAENLVSAGHDISDGGLVVTALEMAFAGNKGINLDLASNGISL 1021
Query: 1027 FQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKT 1086
F+TLF+EELGLVLE+SK+NLD V +KL V+AEIIG V S +E+KVDG+THL+EKT
Sbjct: 1022 FETLFSEELGLVLEISKTNLDAVMEKLRAFDVTAEIIGNVTDSPLIEVKVDGITHLSEKT 1081
Query: 1087 SLLRDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPK 1146
S LRDMWE+TSF+LEK QRLASCVE EKEGLK R EP WKLSF PS T+ YM+ KPK
Sbjct: 1082 SFLRDMWEDTSFQLEKLQRLASCVEMEKEGLKFRHEPNWKLSFIPSSTNNNYMSQDVKPK 1141
Query: 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLD 1206
VAVIREEGSNGDREMSAAFYAAGFEPWDVT+SDL+ G I+LD+FRGIVFVGGFSYADVLD
Sbjct: 1142 VAVIREEGSNGDREMSAAFYAAGFEPWDVTVSDLLAGDITLDQFRGIVFVGGFSYADVLD 1201
Query: 1207 SAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGD 1266
SAKGW+ASIRFN+P+L+QFQEFYKRPDTFSLG+CNGCQLMALLGW+PGPQVGG D
Sbjct: 1202 SAKGWAASIRFNEPVLSQFQEFYKRPDTFSLGICNGCQLMALLGWVPGPQVGGSL----D 1257
Query: 1267 PSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDR 1326
SQPRFVHNESGRFECRF+SVTI+DSP+IMLKGMEGSTLGVWAAHGEGRAYFPD+GVLD
Sbjct: 1258 TSQPRFVHNESGRFECRFTSVTIKDSPSIMLKGMEGSTLGVWAAHGEGRAYFPDEGVLDH 1317
Query: 1327 ILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYP 1386
+LHS LAP+RYCDDDGN TE YPFN+NGSPLG+AAICSPDGRHLAMMPHPERCFLMWQ+P
Sbjct: 1318 MLHSDLAPLRYCDDDGNVTEAYPFNLNGSPLGIAAICSPDGRHLAMMPHPERCFLMWQFP 1377
Query: 1387 WYPKNWNVDKKGPSPWLKMFQNAREW 1412
WYP +W+V+K GPSPWLKMFQNAR+W
Sbjct: 1378 WYPTSWDVEKAGPSPWLKMFQNARDW 1403
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Essential to the male gametophyte development. Arabidopsis thaliana (taxid: 3702) EC: 6EC: .EC: 3EC: .EC: 5EC: .EC: 3 |
| >sp|Q54JC8|PUR4_DICDI Phosphoribosylformylglycinamidine synthase OS=Dictyostelium discoideum GN=purL PE=1 SV=1 | Back alignment and function description |
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Score = 1425 bits (3690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 722/1369 (52%), Positives = 941/1369 (68%), Gaps = 68/1369 (4%)
Query: 93 VVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGL--DSRISTKKLEVLKWL 150
+ FYR P + + L +++K+ + I ++TE+CFN+ + +++ + L WL
Sbjct: 3 IQQFYRKPAISEYEIKLLKNNLKKQHNIDIESIETEYCFNVQYPDNHKLNESEQSTLVWL 62
Query: 151 LQETYEPENLGTE-SFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTR 209
L ET+EP+N + SFL+ +I+EVGPR++FTT +S+NA SIC+ C L+ + R
Sbjct: 63 LSETFEPKNFSIDKSFLKTTTTTTENEIIIEVGPRMNFTTTYSSNATSICKSCNLSIIDR 122
Query: 210 LERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRFVPVMEN 269
+ERSRRYL+ S L + QI+ F ++HDRMTEC+Y + SF+T ++P+ V ++PV+E
Sbjct: 123 IERSRRYLVKSVSKLSEKQIDQFLELIHDRMTECLYPTPIKSFDTGIIPKAVVYIPVVEE 182
Query: 270 GRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGK 329
GR ALE +N+EMGLAFDEQDL YT LF+ +KRNP+ VE FDI QSNSEHSRHWFF GK
Sbjct: 183 GRAALERVNKEMGLAFDEQDLALYTDLFQNQLKRNPSDVECFDIGQSNSEHSRHWFFNGK 242
Query: 330 IVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSES 389
+++DG +TL QIVK+TL+ANP NS+I F DNSS+IKGF K L P + E
Sbjct: 243 LIVDGNMSDKTLFQIVKNTLKANPQNSLIAFSDNSSSIKGFKTKVLIPKSQIEASEYLEG 302
Query: 390 SQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVE 449
++ ++FTAETHNFP +AP+ GAETG GGR+RDTHATGRGS VVA T GYCVGNLN+
Sbjct: 303 EREQPIIFTAETHNFPTGIAPFEGAETGTGGRLRDTHATGRGSLVVAGTVGYCVGNLNIP 362
Query: 450 GSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRR 509
G PWE+ + YP N+A+PL+I I+ASNGASDYGNKFGEP+I G+TR++G LP+G+RR
Sbjct: 363 GYELPWENKEYNYPDNMANPLKIEIEASNGASDYGNKFGEPVIIGFTRSYGNTLPNGERR 422
Query: 510 EWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADL 569
EW+KPIMFSGGIG +D H+ K +P+IGM+VVK GGPAYRIGMGGG+ASSMV G N +L
Sbjct: 423 EWIKPIMFSGGIGFMDERHLKKEQPEIGMVVVKAGGPAYRIGMGGGSASSMVGGDNKHEL 482
Query: 570 DFNAVQRGDAEMAQKLYRVVRACIE---MGETNPIISIHDQGAGGNCNVVKEIIYPKGAE 626
DF+AVQRGDAEM QKL R+VR+C+E G NPI+S+HDQGAGG NV+KEI+ P GA+
Sbjct: 483 DFSAVQRGDAEMGQKLNRIVRSCVESEIHGGCNPIVSVHDQGAGGAGNVLKEIVDPLGAK 542
Query: 627 IDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEG 686
I + II GD TLS +EIWGAEYQE DA+L+K E +D L+ + ERER+ +A +G ++G+G
Sbjct: 543 IYLDRIISGDPTLSAMEIWGAEYQENDALLIKAEHKDYLKKVSERERLPIAFVGDVTGDG 602
Query: 687 RVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGIT 746
L+ G P V+L L++VL MP KTF H ++ +P + +
Sbjct: 603 IAQLI--------TKDGETP----VNLPLDKVLQKMPPKTFVLDHVEKQLKPFTLPKELL 650
Query: 747 VMDS-------LKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQ 799
V D L RVLRL SV SKRFL KVDR VTGLVA+QQ VGPL +++VAVI+
Sbjct: 651 VGDHQTCFNECLNRVLRLLSVGSKRFLINKVDRAVTGLVARQQCVGPLHTPVSNVAVISS 710
Query: 800 TYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAK 859
Y +G A +IGEQPIKG ++ K+MA L VGEALTNL+WA +T L VK SGNWM+AAK
Sbjct: 711 GYFGKSGAATSIGEQPIKGFISAKSMAYLTVGEALTNLMWASITDLGDVKCSGNWMWAAK 770
Query: 860 LDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYS-----GGEVVKAPGSLVISVY 914
L GEG +YDAA + + M+ELGIAIDGGKDSLSMAA + E+VKAPG+LV+S Y
Sbjct: 771 LKGEGVELYDAAIEMHDVMVELGIAIDGGKDSLSMAAKAPKSDGSQELVKAPGALVVSTY 830
Query: 915 VTCPDITKTVTPDLKLG--DDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPY 972
V C DIT TVTPDLKL DD ++L++DL +GGSAL QVF+QVGN+ P + P
Sbjct: 831 VPCDDITLTVTPDLKLSSKDDSVILYLDLGCANNFIGGSALTQVFNQVGNDEPH-HNTPL 889
Query: 973 LKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGN------SL 1026
LK F +Q L+ +L+S GHD SDGGL+ +EMS +GN G+ ++L N S+
Sbjct: 890 LKNTFMAIQKLVKQQLISAGHDRSDGGLITTLIEMSLSGNRGLEINLPDTHNSDQSPLSI 949
Query: 1027 FQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVE------------I 1074
+ LF+EELG VLE+ KSN V L V ++IG + +++ +
Sbjct: 950 IKLLFSEELGAVLEIKKSNQQIVLDILKQFNVPTQVIGNTSCNNNNNNNNNGSDEDLFIV 1009
Query: 1075 KVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLKSRCE-----PLWKLSF 1129
KV N K S L WEETS++LE Q + VESE + L R P + +++
Sbjct: 1010 KVGDKLIYNIKLSQLSKQWEETSYQLELLQANPTFVESEMKNLLKRATGKGKGPNYNMTY 1069
Query: 1130 TPS-LTDEKYMNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLD 1188
S ++ E + A PKVAVIREEGSNGDREM+AAF+ AGF+ +DVTMSDL+NG I LD
Sbjct: 1070 KISPISKELALLANKAPKVAVIREEGSNGDREMAAAFHFAGFQAFDVTMSDLLNGNIQLD 1129
Query: 1189 E-FRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMA 1247
E F+G+ FVGGFSY DV+DSAKGW+ SIRFNQ + QF FY R DTFSLG+CNGCQLMA
Sbjct: 1130 ERFKGVAFVGGFSYGDVMDSAKGWAGSIRFNQQVSKQFDHFYGRNDTFSLGLCNGCQLMA 1189
Query: 1248 LLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGV 1307
LLGW+P + H QPRF+HN SGRFE R+ +V I SPA++LKGMEGS LGV
Sbjct: 1190 LLGWVPYRGIEQTH-------QPRFIHNASGRFESRWVNVKIMPSPALLLKGMEGSVLGV 1242
Query: 1308 WAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDG 1367
W+ HGEGR + D +++ I ++L+P+RY DDDG TE YPFN +G+ G A++CS DG
Sbjct: 1243 WSQHGEGRFWSEDQSIVNDIKANNLSPIRYVDDDGEITESYPFNPSGTQEGFASLCSKDG 1302
Query: 1368 RHLAMMPHPERCFLMWQYPWYPKNWNVDKKG---PSPWLKMFQNAREWC 1413
RHLA+MPHPER FL WQ+P+ P+N + G PSPW+K+FQNA+ +C
Sbjct: 1303 RHLAIMPHPERSFLSWQWPFMPENIKQNVGGLDQPSPWIKIFQNAKSFC 1351
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Dictyostelium discoideum (taxid: 44689) EC: 6 EC: . EC: 3 EC: . EC: 5 EC: . EC: 3 |
| >sp|O15067|PUR4_HUMAN Phosphoribosylformylglycinamidine synthase OS=Homo sapiens GN=PFAS PE=1 SV=4 | Back alignment and function description |
|---|
Score = 1316 bits (3407), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/1338 (51%), Positives = 894/1338 (66%), Gaps = 27/1338 (2%)
Query: 93 VVHFYRIPLLQDSAA-AELLKSVQKKISNQIVGLKTEHCFNIGLDSRI--STKKLEVLKW 149
V+HFY P + AA + +Q K+ ++ G++TE C+N+ + S ++ + L W
Sbjct: 4 VLHFYVRPSGHEGAAPGHTRRKLQGKLP-ELQGVETELCYNVNWTAEALPSAEETKKLMW 62
Query: 150 LLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTR 209
L +++ ES+L G +++EVGPRL+F+T S N VS+CR GL V R
Sbjct: 63 LFGCPLLLDDVARESWL----LPGSNDLLLEVGPRLNFSTPTSTNIVSVCRATGLGPVDR 118
Query: 210 LERSRRYLLFSKGALQDNQINDFA-AMVHDRMTECVYTEKLTSFETSVVPEEVRF-VPVM 267
+E +RRY L S ++ A A +HDRMTE + + SF +PE + + ++
Sbjct: 119 VETTRRYRL-SFAHPPSAEVEAIALATLHDRMTEQHFPHPIQSFSPESMPEPLNGPINIL 177
Query: 268 ENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFT 327
GR ALE+ NQE+GLA D DL +YT+ F+E ++RNP+TVE FD+AQSNSEHSRHWFF
Sbjct: 178 GEGRLALEKANQELGLALDSWDLDFYTKRFQE-LQRNPSTVEAFDLAQSNSEHSRHWFFK 236
Query: 328 GKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLS 387
G++ +DG+ +V +L + + ST +++ N+V+ F DNSSAI+G V+ LRP P +
Sbjct: 237 GQLHVDGQKLVHSLFESIMSTQESSNPNNVLKFCDNSSAIQGKEVRFLRPEDPTRPSRFQ 296
Query: 388 ESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLN 447
+ V+FTAETHNFP V P+ GA TG GGRIRD TGRG+ VVA TAGYC GNL+
Sbjct: 297 QQQGLRHVVFTAETHNFPTGVCPFSGATTGTGGRIRDVQCTGRGAHVVAGTAGYCFGNLH 356
Query: 448 VEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQ 507
+ G PWEDPSF YP N A PL++ I+ASNGASDYGNKFGEP++ G+ R+ G++LP GQ
Sbjct: 357 IPGYNLPWEDPSFQYPGNFARPLEVAIEASNGASDYGNKFGEPVLAGFARSLGLQLPDGQ 416
Query: 508 RREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSM-VSGQND 566
RREW+KPIMFSGGIG ++ +HISK P+ GM VVK+GGP YRIG+GGGAASS+ V G N
Sbjct: 417 RREWIKPIMFSGGIGSMEADHISKEAPEPGMEVVKVGGPVYRIGVGGGAASSVQVQGDNT 476
Query: 567 ADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKGAE 626
+DLDF AVQRGD EM QK+ RV+RAC+E + NPI S+HDQGAGGN NV+KE+ P GA
Sbjct: 477 SDLDFGAVQRGDPEMEQKMNRVIRACVEAPKGNPICSLHDQGAGGNGNVLKELSDPAGAI 536
Query: 627 IDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEG 686
I +GD TL+ LEIWGAEYQE +A+L++ +RD L + RER +GTI+G+
Sbjct: 537 IYTSRFQLGDPTLNALEIWGAEYQESNALLLRSPNRDFLTHVSARERCPACFVGTITGDR 596
Query: 687 RVVLVD--SAAVQKCQSSGLPPP--PPAVDLELERVLGDMPQKTFEFHHADQAREPLDIA 742
R+VLVD V++ PP P VDLELE VLG MP+K F +PL +
Sbjct: 597 RIVLVDDRECPVRRNGQGDAPPTPLPTPVDLELEWVLGKMPRKEFFLQRKPPMLQPLALP 656
Query: 743 PGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYT 802
PG++V +L+RVLRLP+V SKR+LT KVDR V GLVAQQQ VGPLQ LADVAV+A ++
Sbjct: 657 PGLSVHQALERVLRLPAVASKRYLTNKVDRSVGGLVAQQQCVGPLQTPLADVAVVALSHE 716
Query: 803 DLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDG 862
+L G A A+GEQP+K LL+PK ARLAV EALTNLV+A VT L VK SGNWM+AAKL G
Sbjct: 717 ELIGAATALGEQPVKSLLDPKVAARLAVAEALTNLVFALVTDLRDVKCSGNWMWAAKLPG 776
Query: 863 EGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITK 922
EGAA+ DA A+ M LG+A+DGGKDSLSMAA G E V+APGSLVIS Y CPDIT
Sbjct: 777 EGAALADACEAMVAVMAALGVAVDGGKDSLSMAARVGTETVRAPGSLVISAYAVCPDITA 836
Query: 923 TVTPDLKLGDD-GILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQ 981
TVTPDLK + G LL++ L+ G+ RLGG+ALAQ F Q+G PDL+ L R F Q
Sbjct: 837 TVTPDLKHPEGRGHLLYVALSPGQHRLGGTALAQCFSQLGEHPPDLDLPENLVRAFSITQ 896
Query: 982 DLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEV 1041
L+ D L+ +GHD+SDGGL+ C LEM+FAGN G+ +D+ + LFAEE GLVLEV
Sbjct: 897 GLLKDRLLCSGHDVSDGGLVTCLLEMAFAGNCGLQVDVPVPRVDVLSVLFAEEPGLVLEV 956
Query: 1042 SKSNLDTVSKKLHDAGVSAEIIGQVNSS--HS-VEIKVDGLTHLNEKTSLLRDMWEETSF 1098
+ +L V K+ DAG+ +G + H+ V + V+G L E LR +WEETSF
Sbjct: 957 QEPDLAQVLKRYRDAGLHCLELGHTGEAGPHAMVRVSVNGAVVLEEPVGELRALWEETSF 1016
Query: 1099 ELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAVIREEGSNGD 1158
+L++ Q CV E+ GL+ R P + L T P+VA++REEGSNGD
Sbjct: 1017 QLDRLQAEPRCVAEEERGLRERMGPSYCLPPTFPKASVPREPGGPSPRVAILREEGSNGD 1076
Query: 1159 REMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFN 1218
REM+ AF+ AGFE WDVTM DL +GAI LD FRG+ FVGGFSYADVL SAKGW+A++ F+
Sbjct: 1077 REMADAFHLAGFEVWDVTMQDLCSGAIGLDTFRGVAFVGGFSYADVLGSAKGWAAAVTFH 1136
Query: 1219 QPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGP--QVGGVHGAGGDPSQPRFV--H 1274
+ + F KRPDTFSLGVCNGCQL+ALLGW+ G + G P++P + H
Sbjct: 1137 PRAGAELRRFRKRPDTFSLGVCNGCQLLALLGWVGGDPNEDAAEMGPDSQPARPGLLLRH 1196
Query: 1275 NESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAP 1334
N SGR+E R++SV + PA+ML+GMEG+ L VW+AHGEG F + +I LAP
Sbjct: 1197 NLSGRYESRWASVRVGPGPALMLRGMEGAVLPVWSAHGEGYVAFSSPELQAQIEARGLAP 1256
Query: 1335 VRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNV 1394
+ + DDDGNPTE YP N NGSP GVA ICS DGRHLA+MPHPER WQ+ W P +
Sbjct: 1257 LHWADDDGNPTEQYPLNPNGSPGGVAGICSCDGRHLAVMPHPERAVRPWQWAWRPPPF-- 1314
Query: 1395 DKKGPSPWLKMFQNAREW 1412
D SPWL++F NAR W
Sbjct: 1315 DTLTTSPWLQLFINARNW 1332
|
Homo sapiens (taxid: 9606) EC: 6 EC: . EC: 3 EC: . EC: 5 EC: . EC: 3 |
| >sp|Q5SUR0|PUR4_MOUSE Phosphoribosylformylglycinamidine synthase OS=Mus musculus GN=Pfas PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1312 bits (3396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/1339 (51%), Positives = 891/1339 (66%), Gaps = 30/1339 (2%)
Query: 93 VVHFYRIPLLQDSAAA-ELLKSVQKKISNQIVGLKTEHCFNI--GLDSRISTKKLEVLKW 149
V+HFY P + AA+ + + +Q+K+ + ++TE C+N+ ++ ++++ L W
Sbjct: 4 VLHFYVRPSGHEGAASGRVFRRLQEKLPT-LQSVETELCYNVHWAAETLPWAEEMKKLMW 62
Query: 150 LLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTR 209
L +++ E +L G +++EVGPRL+F+T S N VS+C+ GL V R
Sbjct: 63 LFGCPLVRDDVAQEPWL----VPGSNDLLLEVGPRLNFSTPASTNIVSVCQAAGLRAVDR 118
Query: 210 LERSRRYLL-FSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVR-FVPVM 267
+E +RRY L F+ + + AA+ HDRMTE Y + + SF +P ++ + ++
Sbjct: 119 VETTRRYRLSFTDHPTAEMEAISLAAL-HDRMTEQHYPDPIQSFSPQSIPAPLKGSIDIL 177
Query: 268 ENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFT 327
GR ALE+ NQE+GLA D DL +YT+ F+E ++RNP+TVE+FD+AQSNSEHSRHWFF
Sbjct: 178 AEGRPALEKANQELGLALDSWDLDFYTKRFQE-LQRNPSTVEVFDLAQSNSEHSRHWFFK 236
Query: 328 GKIVIDGKPMVRTLMQIVKST-LQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQL 386
G++ +DGK + +L + + ST +NPNN V+ F DNSSAI+G VK LRP + +R
Sbjct: 237 GQLHVDGKKLAHSLFESIMSTQASSNPNN-VLKFCDNSSAIQGKKVKFLRP-EDSTRPSC 294
Query: 387 SESSQDL-DVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGN 445
+ Q L V+FTAETHNFP VAP+ GA TG GGRIRD TGRG+ VVA TAGYC GN
Sbjct: 295 FQQQQGLRHVVFTAETHNFPTGVAPFSGATTGTGGRIRDVQCTGRGAHVVAGTAGYCFGN 354
Query: 446 LNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPS 505
L++ PWEDPSF YP N A PL++ I+ASNGASDYGNKFGEP++ G+ R+ G++LP
Sbjct: 355 LHIPDYNLPWEDPSFQYPGNFARPLEVAIEASNGASDYGNKFGEPVLAGFARSLGLQLPD 414
Query: 506 GQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSM-VSGQ 564
GQRREW+KPIMFSGGIG ++ H+ K P+ GM VVK+GGP YRIG+GGGAASS+ V G
Sbjct: 415 GQRREWIKPIMFSGGIGSMEAKHVGKKPPEPGMEVVKVGGPVYRIGVGGGAASSVQVQGD 474
Query: 565 NDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKG 624
N +DLDF AVQRGD EM QK+ RV+RAC+E NPI S+HDQGAGGN NV+KE+ P+G
Sbjct: 475 NTSDLDFGAVQRGDPEMEQKMNRVIRACVEAPGGNPICSLHDQGAGGNGNVLKELSDPEG 534
Query: 625 AEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISG 684
A I +GD TL+ LEIWGAEYQE +A+L++P RD L RER +GTI+G
Sbjct: 535 AIIYTSRFQLGDPTLNALEIWGAEYQESNALLLRPSDRDFLSRASARERCPACFVGTITG 594
Query: 685 EGRVVLVD--SAAVQKCQSSGLP-PPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDI 741
+ R+VLVD V K P PP VDL+L+ VLG MPQK F +PL +
Sbjct: 595 DKRIVLVDDRECLVGKTGQGDAPLTPPTPVDLDLDWVLGKMPQKEFFLQRKPPVLQPLAL 654
Query: 742 APGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTY 801
P ++V +L RVLRLP+V SKR+LT KVDR V GLVAQQQ VGPLQ LADVAV+A ++
Sbjct: 655 PPELSVRQALNRVLRLPAVASKRYLTNKVDRSVGGLVAQQQCVGPLQTPLADVAVVALSH 714
Query: 802 TDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLD 861
+ G A A+GEQP+K LL+PKA ARLAV EALTNLV+A VT L VK SGNWM+AAKL
Sbjct: 715 QECIGAATALGEQPVKSLLDPKAAARLAVSEALTNLVFALVTDLRDVKCSGNWMWAAKLP 774
Query: 862 GEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDIT 921
GEGAA+ DA A+ M LG+A+DGGKDSLSMAA G E V+APGSLVIS Y CPDIT
Sbjct: 775 GEGAALADACEAMVAVMAALGVAVDGGKDSLSMAARVGTETVQAPGSLVISAYAVCPDIT 834
Query: 922 KTVTPDLKL-GDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETV 980
TVTPDLK G G LL++ L+ G+ RLGG+ALAQ F Q+G PDL+ L R F
Sbjct: 835 ATVTPDLKHPGGKGHLLYVPLSPGQHRLGGTALAQCFSQLGEHPPDLDLPENLVRAFHIT 894
Query: 981 QDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLE 1040
Q L+ + + +GHD+SDGGL+ C LEM+FAGN GI +D+ + G LFAEE GLVLE
Sbjct: 895 QGLLKECRLCSGHDVSDGGLVTCLLEMAFAGNCGIEVDVPAPGIHALPVLFAEEPGLVLE 954
Query: 1041 VSKSNLDTVSKKLHDAGVSAEIIGQVNSSHS---VEIKVDGLTHLNEKTSLLRDMWEETS 1097
V ++++ V ++ AG+ +G + I V+ + E LR +WEETS
Sbjct: 955 VQEADVAGVRQRYESAGLRCLELGHTGEAGPQAMARISVNKAVVVEEPVGELRALWEETS 1014
Query: 1098 FELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAVIREEGSNG 1157
F+L+ Q CV EK+GLK R P + L T + P+VA++REEGSNG
Sbjct: 1015 FQLDLLQAEPRCVIEEKQGLKERTGPSYYLPPTFPVASVPCKPGGPVPRVAILREEGSNG 1074
Query: 1158 DREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRF 1217
DREM+ AF+ AGFE WDVTM DL +GAI LD FRG+ FVGGFSYADVL SAKGW+A++ F
Sbjct: 1075 DREMADAFHLAGFEVWDVTMQDLCSGAIRLDTFRGVAFVGGFSYADVLGSAKGWAAAVTF 1134
Query: 1218 NQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPG--PQVGGVHGAGGDPSQPRFV-- 1273
N + F +RPDTFSLGVCNGCQL+ALLGW+ + G P+QP +
Sbjct: 1135 NPQAREELGRFRRRPDTFSLGVCNGCQLLALLGWVGSDPSEEQAEPGQDSQPTQPGLLLR 1194
Query: 1274 HNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLA 1333
HN SGRFE R+++V +E PA+ML+GMEGS L VW+AHGEG F + +I L
Sbjct: 1195 HNLSGRFESRWATVRVEPGPALMLRGMEGSVLPVWSAHGEGYMAFSSPELQAKIEAKGLV 1254
Query: 1334 PVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWN 1393
P+ + DDDGNPTE YP N NGSP G+A ICS DGRHLA+MPHPER +WQ+ W P ++
Sbjct: 1255 PLHWADDDGNPTEQYPLNPNGSPGGIAGICSQDGRHLALMPHPERAVRLWQWAWRPSPFD 1314
Query: 1394 VDKKGPSPWLKMFQNAREW 1412
V SPWL++F NAR W
Sbjct: 1315 VLPT--SPWLQLFINARNW 1331
|
Mus musculus (taxid: 10090) EC: 6 EC: . EC: 3 EC: . EC: 5 EC: . EC: 3 |
| >sp|P35421|PUR4_DROME Phosphoribosylformylglycinamidine synthase OS=Drosophila melanogaster GN=ade2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1180 bits (3052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/1369 (46%), Positives = 875/1369 (63%), Gaps = 70/1369 (5%)
Query: 93 VVHFYRIPLLQDSAAAELLKSVQKKISNQ---IVGLKTEHCFNIGLDSRI--STKKLEVL 147
++ +Y + Q +AAE +SV +++ + +V ++ E C+++ ++ S E+L
Sbjct: 3 ILRYYDV---QAHSAAEE-ESVLRRLREEDGAVVSVRMERCYHLEYSAQAEHSLALDELL 58
Query: 148 KWLLQETYEP-ENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTE 206
WL+++ ++L + L+ G +++E+GPR +F+T +S N V+I + G +E
Sbjct: 59 VWLVKQPLSKGQSLSRQPALQST---GSSQLLLEIGPRFNFSTPYSTNCVNIFQNLGYSE 115
Query: 207 VTRLERSRRYLL-FSKGALQDNQINDFAAMVHDRMTECVYTEKLT---SFETSVVPEEV- 261
V R+E S RYL+ F +G+ + + F ++ DRMT+C+YTE+ T SF+ + +
Sbjct: 116 VRRMETSTRYLVTFGEGS-KAPEAARFVPLLGDRMTQCLYTEENTPKASFDEQLPERQAN 174
Query: 262 -RFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEH 320
FVPV+E GR ALE INQE+GLAF++ DL YY LF +++ RNPTTVELFD AQSNSEH
Sbjct: 175 WHFVPVLEEGRAALERINQELGLAFNDYDLDYYHDLFAKELGRNPTTVELFDCAQSNSEH 234
Query: 321 SRHWFFTGKIVIDGKPMVRTLMQIVKST-LQANPNNSVIGFKDNSSAIKGFPVKQLRP-- 377
SRHWFF G++VIDG ++L++++ T NPNN+ I F DNSSA+ GF + + P
Sbjct: 235 SRHWFFRGRMVIDGVEQPKSLIRMIMDTQAHTNPNNT-IKFSDNSSAMVGFDHQTIVPSS 293
Query: 378 -VQPGS-RCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVV 435
V PG+ R Q +S D++FTAETHN P AVAP+ GA TG GGR+RD GRG +
Sbjct: 294 VVAPGAVRLQSVQS----DLIFTAETHNMPTAVAPFSGATTGTGGRLRDVQGVGRGGVPI 349
Query: 436 ASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGY 495
A TAGYCVG L++ G P+E F YP+ A PLQ+LI+ASNGASDYGNKFGEP+I G+
Sbjct: 350 AGTAGYCVGALHIPGYKQPYEPLDFKYPATFAPPLQVLIEASNGASDYGNKFGEPVISGF 409
Query: 496 TRTFGMR--LPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMG 553
++G+ + QR E++KPIMFSGG+G + K P G L+ KIGGP YRIG+G
Sbjct: 410 ALSYGLNSAADASQRDEYVKPIMFSGGLGTMPATMREKLPPARGQLLAKIGGPVYRIGVG 469
Query: 554 GGAASSM-VSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGN 612
GGAASS+ + G DA+LDFNAVQRGDAEM KL RVVRAC+++GE NPI++IHDQGAGGN
Sbjct: 470 GGAASSVEIQGSGDAELDFNAVQRGDAEMENKLNRVVRACLDLGEQNPILAIHDQGAGGN 529
Query: 613 CNVVKEIIYP--KGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICE 670
NV+KE++ P GA I + +GD T++ LE+WGAEYQE +A+L + R+LL+ IC
Sbjct: 530 GNVLKELVEPGFAGAVIFSKEFQLGDPTITALELWGAEYQENNAILCNADQRELLEKICR 589
Query: 671 RERVSMAVIGTISGEGRVVLVDSAAV----QKCQSSGLPPPPPAVDLELERVLGDMPQKT 726
RER ++ +G ++G+GRV L++ A Q +S P DLEL+ VLGDMP++T
Sbjct: 590 RERCPISFVGVVTGDGRVTLLEKPAPKDLEQALNASNRSEVSP-FDLELKYVLGDMPKRT 648
Query: 727 FEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGP 786
++ + L + G+ + ++L+RVL L +V SKRFLT KVDRCV GL+AQQQ VGP
Sbjct: 649 YDLKREQTPLKELSLPKGLLLDEALERVLSLVAVGSKRFLTNKVDRCVGGLIAQQQCVGP 708
Query: 787 LQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLS 846
LQ LAD A+ ++ +G A +IG QP+KGLL+P AMAR+ V EAL+NLV+ K++ L+
Sbjct: 709 LQAPLADYALTTVSHFSHSGIATSIGTQPLKGLLDPAAMARMCVAEALSNLVFVKISELA 768
Query: 847 HVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAP 906
VK SGNWM+AAKL GEGA M+DA L + + EL IAIDGGKDSLSMAA GGE +K+P
Sbjct: 769 DVKCSGNWMWAAKLPGEGARMFDACKELCQILEELHIAIDGGKDSLSMAAKVGGETIKSP 828
Query: 907 GSLVISVYVTCPDITKTVTPDLK---LGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNE 963
G+LVIS Y CPD+ VTPDLK G LL I+L + RLGGSALAQ + Q G +
Sbjct: 829 GTLVISTYAPCPDVRLKVTPDLKGPGAGSKTSLLWINL-ENSARLGGSALAQAYAQQGKD 887
Query: 964 SPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEG 1023
+P+L L + F Q L+GD L+ GHD+SDGGLLVC LEM+ G G+ +DL+
Sbjct: 888 TPNLTRSDVLGKAFAVTQSLLGDGLIQAGHDVSDGGLLVCVLEMAIGGLSGLRVDLSEPL 947
Query: 1024 NSL--------------FQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNS- 1068
L LFAEE G V+EV ++L+ V AGV +G
Sbjct: 948 AKLKNFDKSVEKLNRPELAVLFAEECGWVVEVLDTDLERVRSTYEKAGVPNYYLGVTEGF 1007
Query: 1069 --SHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWK 1126
V +K L++ +L WE TS+ELEK Q C E+E L+ R P ++
Sbjct: 1008 GLDSRVVLKNGKSELLDQPLRVLYKKWERTSYELEKLQANPECAEAEYNSLEYRQAPQYR 1067
Query: 1127 LSFTPSLTDEKYMNATSKP-KVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAI 1185
++ E + +S P +VAV+REEG N +REM A A FE DVTMSDL+ G
Sbjct: 1068 --GPQNVQAELTLKRSSAPVRVAVLREEGVNSEREMMACLLRANFEVHDVTMSDLLQGTA 1125
Query: 1186 SLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQL 1245
S+ ++RG++F GGFSYAD L SAKGW+A+I N LL QF+ F +R D FSLG+CNGCQL
Sbjct: 1126 SVSQYRGLIFPGGFSYADTLGSAKGWAANILHNPRLLPQFEAFKRRQDVFSLGICNGCQL 1185
Query: 1246 MALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTL 1305
M L+G++ + G DP +HN+S RFECR+++V I + +IML M+ L
Sbjct: 1186 MTLIGFVGSAK----SEVGADPDVA-LLHNKSQRFECRWATVKIPSNRSIMLGSMKDLVL 1240
Query: 1306 GVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSP 1365
G W AHGEGR F D+ ++ + L ++Y DD G PTE+YP N NGSP G+A +CS
Sbjct: 1241 GCWVAHGEGRFAFRDEKLISHLQSEQLVTLQYVDDVGKPTELYPLNPNGSPQGIAGLCSS 1300
Query: 1366 DGRHLAMMPHPERCFLMWQYPWYPKNWNVD-KKGPSPWLKMFQNAREWC 1413
DGRHLA+MPHPERC M+Q+P+ P ++ V + SPW MF NA WC
Sbjct: 1301 DGRHLALMPHPERCSSMYQWPYVPSSFEVSPTQSESPWQIMFNNAYNWC 1349
|
Drosophila melanogaster (taxid: 7227) EC: 6 EC: . EC: 3 EC: . EC: 5 EC: . EC: 3 |
| >sp|Q19311|PUR4_CAEEL Probable phosphoribosylformylglycinamidine synthase OS=Caenorhabditis elegans GN=F10F2.2 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/1366 (45%), Positives = 847/1366 (62%), Gaps = 95/1366 (6%)
Query: 97 YRIPLLQDSAAAELLKSVQK---KISNQIVGLKTEHCFN-IGLDSRISTKKLEVLKWLLQ 152
+ + L + + L +QK K N+ + + E+C++ I + + + E L LL
Sbjct: 4 FHVKLYAKAVESRKLDQIQKDFEKKFNRKIDVSVEYCYHVITQEPELISSNWEKLVTLLS 63
Query: 153 ETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLER 212
+ ++ ES L + K +E+GPR + TA N +SI G+ V R+ER
Sbjct: 64 HSPFETSVWKESQLHPEHGKN-----IEIGPRTAVKTAACTNILSIFESSGIKNVERIER 118
Query: 213 SRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRFVPVMENGRK 272
RYL+ D +N+F + D+MTE +Y + + S E+V + V+E+ ++
Sbjct: 119 GIRYLV-----EDDVDVNEFFEIAADKMTEAIYGNDVKFDDESHQIEKVFLIDVLES-KQ 172
Query: 273 ALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVI 332
L + N+E+GLA D+ DL +Y F +K+NPT VELFD+AQS+SEHSRHWFF G+I I
Sbjct: 173 NLIKANEELGLALDQLDLDFYYDFFVNKVKKNPTDVELFDLAQSDSEHSRHWFFRGEIWI 232
Query: 333 DGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGF-PVKQLRPVQPGSRCQLSESSQ 391
D + +LM+ ++ TL ++ +NS+I F DNSSAI+GF V +LRP P + +
Sbjct: 233 DDRKRDGSLMKTIRETLDSSNDNSLIAFCDNSSAIRGFESVCRLRPNDPTTVSPMIAIFP 292
Query: 392 DLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGS 451
++++AETHNFP AV P+ GA TG GGRIRD HATGRG++ +A T GY GNLN+ G
Sbjct: 293 PSHLIYSAETHNFPTAVCPFQGATTGTGGRIRDIHATGRGAYEIAGTVGYSFGNLNLPGL 352
Query: 452 YAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREW 511
PWED +F YP++++ P +I I+ASNGASDYGNKFGEP+I G+ R+FG RL +G+R E+
Sbjct: 353 PLPWEDETFEYPTSISEPAKIAIEASNGASDYGNKFGEPVISGFARSFGQRLENGERCEY 412
Query: 512 LKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSM-VSGQNDADLD 570
LKPIMFSGGIG ID + + K VVKIGGP YRIG+GGGAASS+ V G + LD
Sbjct: 413 LKPIMFSGGIGAIDKDEVRKEPCAPHQKVVKIGGPVYRIGVGGGAASSVSVQGNRENQLD 472
Query: 571 FNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIR 630
F AVQRGDAEM KL+RVVRAC E NP+++IHDQGAGGN NV+KE++ G +
Sbjct: 473 FAAVQRGDAEMGGKLHRVVRACAERIGGNPLMAIHDQGAGGNGNVIKELVEGCGVTVKSD 532
Query: 631 AIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVL 690
+GD ++S+ E+W AEYQE DA LV D LQ+I +RE+ ++V+G + E RV L
Sbjct: 533 TFQLGDESISLRELWTAEYQENDAALVDASLLDALQTISKREKCHVSVVGEVEKEQRVKL 592
Query: 691 VDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDS 750
+ + AVDL+ R LG+ +K F+ A + + L++ +TV +
Sbjct: 593 LGKSG------------EIAVDLDT-RQLGEREKKVFKLKSAPRVLKKLELPENLTVRKA 639
Query: 751 LKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACA 810
LKRVL LPSV SKR+LT KVDR VTGLVAQQQ VGPL LADVAV+A ++ D GGA +
Sbjct: 640 LKRVLMLPSVASKRYLTCKVDRSVTGLVAQQQCVGPLHTPLADVAVVALSHFDTVGGAVS 699
Query: 811 IGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDA 870
+GEQPIK L++ + AR+ + E + NL+WA +T L VK SGNWM+AAK DGEGA + DA
Sbjct: 700 LGEQPIKMLIDAEKGARMCIAETIMNLIWAPITDLKDVKMSGNWMWAAKCDGEGARLVDA 759
Query: 871 ATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKL 930
AL + E+G AIDGGKDSLSMA + GEVVK+PG+LV+S Y C ++TK V P LK
Sbjct: 760 VGALCRGLREIGCAIDGGKDSLSMAVTAHGEVVKSPGTLVLSAYAPCTNVTKVVNPSLKA 819
Query: 931 --GDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDE- 987
G + + I ++ K RLGGSALAQV+ Q+G++ PD+E+ + +VF VQ L+ E
Sbjct: 820 VPGSKILWIKIGSSEEKMRLGGSALAQVYSQIGDDCPDIENFSEISKVFSIVQQLLNREE 879
Query: 988 --------LVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSL--FQTLFAEELGL 1037
++ GHDISDGGLL LEM+FAGN I +D+ ++ LFAEE G+
Sbjct: 880 LAGPLRKPIILAGHDISDGGLLTAILEMAFAGNVSIDIDIKPPNQNIKPIDILFAEECGI 939
Query: 1038 VLEVSKSNLDTVSKKLHDAGVSAEIIGQVNS----SHSVEIKVDGLTHLNEKTSLLRDMW 1093
+LEV SN + V +AG+ + IG+ ++ V+I V+G +NEK LR+ W
Sbjct: 940 LLEV--SNPENVLHIFSEAGIKCQEIGKASAVFGPDAHVKIHVNGHLEINEKLVDLREEW 997
Query: 1094 EETSFELEKFQRLASCVESEKE------GLKSRCEPLWKLSFTPS-LTDEKYMNATSKPK 1146
E L +FQ ++ +E + +C+ W + P+ + +E+Y ++ P+
Sbjct: 998 ELVGDRLGEFQTNPKSLKEAREVRRTCQKINYKCDFDW--YYNPAFIHNEQYF--STAPR 1053
Query: 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLD 1206
VA+IREEGSNGDREM++AF AGF+ +DVTM+D++ G +L+ +RG+ FVGGFSYADVL
Sbjct: 1054 VAIIREEGSNGDREMASAFTLAGFQTFDVTMTDILAGH-TLEAYRGVAFVGGFSYADVLG 1112
Query: 1207 SAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGD 1266
SAKGW+A ++FN+ + QF+ F RPDTFS GVCNGCQLMA LGWI GD
Sbjct: 1113 SAKGWAAGVQFNESVSKQFEAFRSRPDTFSYGVCNGCQLMAQLGWI------------GD 1160
Query: 1267 PSQ--PRFV--HNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDG 1322
Q P NE GRF+ F V IE + +IML GME S LG+W++HGEGR + +
Sbjct: 1161 EEQKGPTVFLDENECGRFDSSFGPVKIEKNVSIMLSGMENSVLGLWSSHGEGRFTYRNLQ 1220
Query: 1323 VLDRILHSHLAPVRYCD-------DDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPH 1375
+ + +R+CD D G+ YP+N NGS VAAICS DGRHLAMMPH
Sbjct: 1221 NFQNLKTNGQVCIRFCDDRGMTGADHGSVKLPYPWNPNGSIDDVAAICSRDGRHLAMMPH 1280
Query: 1376 PERCFLMWQY------PWYPKNWNVDKK--GPSPWLKMFQNAREWC 1413
+R FL WQ+ PW N D+K SPW+KMF+NA WC
Sbjct: 1281 ADRSFLTWQWAESSEVPW---NARFDQKTVALSPWIKMFRNAYNWC 1323
|
Caenorhabditis elegans (taxid: 6239) EC: 6 EC: . EC: 3 EC: . EC: 5 EC: . EC: 3 |
| >sp|Q3IHZ2|PUR4_PSEHT Phosphoribosylformylglycinamidine synthase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=purL PE=3 SV=1 | Back alignment and function description |
|---|
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/1256 (39%), Positives = 716/1256 (57%), Gaps = 57/1256 (4%)
Query: 178 IVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVH 237
+V V PR + W++ A I CGL +V R+ER Y + +G L Q+ A++H
Sbjct: 73 LVLVTPRPGTISPWASKATDIAHNCGLKQVHRVERGIAY--YVEGELNAEQLLQVTALLH 130
Query: 238 DRMTECVYT--EKLTSFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTR 295
DRMTE ++ E S P ++ V ++ GR+AL N E G A + ++ Y
Sbjct: 131 DRMTEATHSQFEDAAQLFRSDAPRQMSSVDILSGGREALAIANVEQGFALADDEIDYLVE 190
Query: 296 LFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNN 355
F + + RNP +ELF AQ+NSEH RH F IDG+ ++L +++K+T + NP N
Sbjct: 191 NFIK-LGRNPNDIELFMFAQANSEHCRHKIFNADWTIDGEEQPKSLFKMIKNTFEKNPEN 249
Query: 356 SVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAE 415
+ +KDN++ +KG + P G + + +D+++L ETHN P A+AP+ GA
Sbjct: 250 VLSAYKDNAAVMKGSKAGRFFPNTQG---EYAYHQEDIEILMKVETHNHPTAIAPFSGAA 306
Query: 416 TGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILID 475
TG+GG IRD ATGRGS A G+ V NL + G PWE F P + + L I+ +
Sbjct: 307 TGSGGEIRDEGATGRGSKPKAGLVGFTVSNLRIPGYEQPWES-DFGKPGRIVTALDIMTE 365
Query: 476 ASNGASDYGNKFGEPLIQGYTRTFGMRLPSG---QRREWLKPIMFSGGIGQIDHNHISKG 532
G + + N+FG P + GY RT+ ++ S + R + KPIM +GG+G I +H+ KG
Sbjct: 366 GPLGGAAFNNEFGRPNLLGYFRTYEEQVTSHNGLEVRGYHKPIMLAGGLGNIRTDHVQKG 425
Query: 533 EPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRAC 592
E +G ++ +GGPA IG+GGGAASSM SGQ++ DLDF +VQR + EM ++ V+ C
Sbjct: 426 EIPVGAKLIALGGPAMNIGLGGGAASSMASGQSNEDLDFASVQRENPEMERRCQEVIDKC 485
Query: 593 IEMGETNPIISIHDQGAGGNCNVVKEIIYP--KGAEIDIRAIIVGDHTLSVLEIWGAEYQ 650
++G+ NPI IHD GAGG N E++ +G + +R I + ++ EIW E Q
Sbjct: 486 WQLGDENPIAFIHDVGAGGLSNAFPELVNDGGRGGKFQLRDIPNDEPGMAPHEIWCNESQ 545
Query: 651 EQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPA 710
E+ + V E D ++IC+RER AVIG + E + + DS
Sbjct: 546 ERYVLAVGVEDFDRFEAICKRERAQYAVIGEATAEPHLTVADSHFDNN-----------P 594
Query: 711 VDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKV 770
VDL L+ +LG P+ + + LD+ I V D+ +R+LRLP++ K FL T
Sbjct: 595 VDLPLDVLLGKAPKMHRDVTSKQVVGKALDVT-NINVADAAQRLLRLPTIAEKTFLITIG 653
Query: 771 DRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAV 830
DR VTGLVA+ Q VGP Q+ +A+ AV A TY G A ++GE+ LLN A ARLAV
Sbjct: 654 DRSVTGLVARDQMVGPWQVPVANCAVTAATYDTYHGEAMSLGERTPAALLNYAASARLAV 713
Query: 831 GEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMI-ELGIAIDGGK 889
E+LTN+ A + SL ++K S NWM AA GE A +Y+A A+ E + LG+ I GK
Sbjct: 714 AESLTNIACANIGSLENIKLSANWMAAAGHPGEDAGLYEAVKAIGEELCPALGLTIPVGK 773
Query: 890 DSLSMAAY------SGGEVVKAPGSLVISVYVTCPDITKTVTPDLKL--GDDGILLHIDL 941
DS+SM S + V +P SL+I+ + D+ KTVTP L+ G+ ++L +DL
Sbjct: 774 DSMSMKTTWKDEGDSQEKSVTSPLSLIITAFGRVDDVRKTVTPQLRTDKGETSLIL-VDL 832
Query: 942 AKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLL 1001
GK R+G S+LAQV+ Q+G+ +PD++ LK + +Q L+ D + HD SDGGL
Sbjct: 833 GAGKNRMGASSLAQVYKQLGDITPDVDSPELLKGFYNAMQVLVADSKLLAYHDRSDGGLF 892
Query: 1002 VCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVS-- 1059
EM+FAG+ G+T+D+N + + L+ EELG V++V+ S+LD V+ L D G++
Sbjct: 893 TTVAEMAFAGHTGVTVDINGLTGNDIEALYNEELGAVIQVANSDLDAVNAVLKDHGLATI 952
Query: 1060 AEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLKS 1119
+ IIG +NS ++ T L+ + LR MW ET+++++ + C + E +
Sbjct: 953 SHIIGTLNSDDAIVFNRGKNTVLSNTRTELRTMWAETTYQMQARRDNPECAKQEFDAKFD 1012
Query: 1120 RCEPLWKLSFTPSLTDE---KYMNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVT 1176
+P + L ++ Y+ +KP +A++RE+G N EM+AAF AGF DV
Sbjct: 1013 VKDPGLNVKLNFDLNEDIAAPYIATGAKPPMAILREQGVNSHLEMAAAFNRAGFAAIDVH 1072
Query: 1177 MSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFS 1236
MSD++ G +SL++F+G+V GGFSY DVL + +GW+ SI FN QFQ F+ R DTFS
Sbjct: 1073 MSDILEGRLSLEQFKGLVACGGFSYGDVLGAGEGWAKSILFNDMAREQFQSFFHREDTFS 1132
Query: 1237 LGVCNGCQLMALLG-WIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAI 1295
LGVCNGCQ+++ L IPG + PRFV N+S RFE RFS V I+++P++
Sbjct: 1133 LGVCNGCQMLSTLKELIPGTE-----------HWPRFVTNKSERFEARFSLVEIQENPSV 1181
Query: 1296 MLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGS 1355
GM GS + + +HGEG A F +D + L S V++ D+ GNPT YP N NGS
Sbjct: 1182 FFNGMAGSRMPIAVSHGEGHAEFANDNAVKAALDSGTVAVKFVDNYGNPTTQYPANPNGS 1241
Query: 1356 PLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 1411
P G+ I S DGR MMPHPER F W+P W D SPW++MF+NAR+
Sbjct: 1242 PEGITGITSTDGRATVMMPHPERVFRAVANSWHPDEWRED----SPWMRMFRNARK 1293
|
Pseudoalteromonas haloplanktis (strain TAC 125) (taxid: 326442) EC: 6 EC: . EC: 3 EC: . EC: 5 EC: . EC: 3 |
| >sp|P74881|PUR4_SALTY Phosphoribosylformylglycinamidine synthase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=purL PE=1 SV=3 | Back alignment and function description |
|---|
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/1253 (39%), Positives = 713/1253 (56%), Gaps = 53/1253 (4%)
Query: 178 IVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVH 237
++ V PR + WS+ A I CGL +V RLER Y + L Q AA +H
Sbjct: 74 LLLVTPRPGTISPWSSKATDIAHNCGLQQVDRLERGVAYYI-EASTLTAEQWRQVAAELH 132
Query: 238 DRMTECVYTEKLTSFETSVV---PEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYT 294
DRM E V++ LT E + P V V ++ GR+AL + N +GLA E ++ Y
Sbjct: 133 DRMMETVFS-SLTDAEKLFIHHQPAPVSSVDLLGEGRQALIDANLRLGLALAEDEIDYLQ 191
Query: 295 RLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPN 354
F + + RNP +EL+ AQ+NSEH RH F +IDGKP ++L +++K+T + P+
Sbjct: 192 EAFTK-LGRNPNDIELYMFAQANSEHCRHKIFNADWIIDGKPQPKSLFKMIKNTFETTPD 250
Query: 355 NSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGA 414
+ +KDN++ ++G V + R + + +L ETHN P A++P+PGA
Sbjct: 251 YVLSAYKDNAAVMEGSAVGRYFADHNTGRYDFHQ--EPAHILMKVETHNHPTAISPWPGA 308
Query: 415 ETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILI 474
TG+GG IRD ATGRG+ A G+ V NL + G PWE+ F P + + L I+
Sbjct: 309 ATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEE-DFGKPERIVTALDIMT 367
Query: 475 DASNGASDYGNKFGEPLIQGYTRTFGMRLPSG---QRREWLKPIMFSGGIGQIDHNHISK 531
+ G + + N+FG P + GY RT+ ++ S + R + KPIM +GGIG I +H+ K
Sbjct: 368 EGPLGGAAFNNEFGRPALTGYFRTYEEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQK 427
Query: 532 GEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRA 591
GE +G ++ +GGPA IG+GGGAASSM SGQ+DADLDF +VQR + EM ++ V+
Sbjct: 428 GEIVVGAKLIVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDR 487
Query: 592 CIEMGETNPIISIHDQGAGGNCNVVKEIIYP--KGAEIDIRAIIVGDHTLSVLEIWGAEY 649
C ++G+ NPI+ IHD GAGG N + E++ +G + ++R I+ + +S LEIW E
Sbjct: 488 CWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNES 547
Query: 650 QEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPP 709
QE+ + V + L +C+RER AVIG + E + L D+ +
Sbjct: 548 QERYVLAVAADQLPLFDELCKRERAPYAVIGDATEEQHLSLHDNHFDNQ----------- 596
Query: 710 AVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTK 769
+DL L+ +LG P+ T + + L+ A IT+ D++KRVL LP+V K FL T
Sbjct: 597 PIDLPLDVLLGKTPKMTRDVQTLKAKGDALNRA-DITIADAVKRVLHLPTVAEKTFLVTI 655
Query: 770 VDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLA 829
DR VTG+VA+ Q VGP Q+ +AD AV + G A +IGE+ LL+ A ARLA
Sbjct: 656 GDRTVTGMVARDQMVGPWQVPVADCAVTTASLDSYYGEAMSIGERAPVALLDFAASARLA 715
Query: 830 VGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMI-ELGIAIDGG 888
VGEALTN+ ++ + +K S NWM AA GE A +YDA A+ E + +LG+ I G
Sbjct: 716 VGEALTNIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYDAVKAVGEELCPQLGLTIPVG 775
Query: 889 KDSLSMAA--YSGGEV--VKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKG 944
KDS+SM G E + +P SLVIS + D+ T+TP L D+ +LL IDL KG
Sbjct: 776 KDSMSMKTRWQEGNEQREMTSPLSLVISAFARVEDVRHTLTPQLSTEDNALLL-IDLGKG 834
Query: 945 KRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCT 1004
LG +ALAQV+ Q+G++ D+ DV LK ++ +Q L+ + HD SDGGLLV
Sbjct: 835 HNALGATALAQVYRQLGDKPADVRDVAQLKGFYDAMQALVAARKLLAWHDRSDGGLLVTL 894
Query: 1005 LEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVS--AEI 1062
EM+FAG+ G+ +D+ + G+ LF EELG V++V + D V L G++
Sbjct: 895 AEMAFAGHCGVQVDIAALGDDHLAALFNEELGGVIQVRAEDRDAVEALLAQYGLADCVHY 954
Query: 1063 IGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLKSRCE 1122
+GQ + I + T +E + LR W ET++++++ + C + E E + +
Sbjct: 955 LGQALAGDRFVITANDQTVFSESRTTLRVWWAETTWQMQRLRDNPQCADQEHEAKANDTD 1014
Query: 1123 PLWKLSFTPSLTDE---KYMNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSD 1179
P + + + ++ Y+ ++PKVAV+RE+G N EM+AAF+ AGF+ DV MSD
Sbjct: 1015 PGLNVKLSFDINEDIAAPYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSD 1074
Query: 1180 LINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGV 1239
L+ G I L F +V GGFSY DVL + +GW+ SI FN + ++F+ F+ RP T +LGV
Sbjct: 1075 LLGGRIGLGNFHALVACGGFSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGV 1134
Query: 1240 CNGCQLMA-LLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLK 1298
CNGCQ+M+ L IPG ++ PRFV N S RFE RFS V + SP+++L+
Sbjct: 1135 CNGCQMMSNLRELIPGSEL-----------WPRFVRNHSDRFEARFSLVEVTQSPSLLLQ 1183
Query: 1299 GMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLG 1358
GM GS + + +HGEGR DD L + L +RY D+ G TE YP N NGSP G
Sbjct: 1184 GMVGSQMPIAVSHGEGRVEVRDDAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNG 1243
Query: 1359 VAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 1411
+ A+ + +GR MMPHPER F W+P+NW D SPW+++F+NAR+
Sbjct: 1244 ITAVTTENGRVTIMMPHPERVFRTVANSWHPENWGED----SPWMRIFRNARK 1292
|
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287) EC: 6 EC: . EC: 3 EC: . EC: 5 EC: . EC: 3 |
| >sp|Q8Z4L6|PUR4_SALTI Phosphoribosylformylglycinamidine synthase OS=Salmonella typhi GN=purL PE=3 SV=3 | Back alignment and function description |
|---|
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/1257 (38%), Positives = 713/1257 (56%), Gaps = 53/1257 (4%)
Query: 174 LKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFA 233
L ++ V PR + WS+ A I CGL ++ RLER Y + L Q A
Sbjct: 70 LAGKLLLVTPRPGTISPWSSKATDIAHNCGLQQIDRLERGVAYYI-EASTLTAEQWRQVA 128
Query: 234 AMVHDRMTECVYTEKLTSFETSVV---PEEVRFVPVMENGRKALEEINQEMGLAFDEQDL 290
A +HDRM E V++ LT E + P V V ++ GR+AL + N +GLA E ++
Sbjct: 129 AELHDRMMETVFS-SLTDAEKLFIHHQPAPVSSVDLLGEGRQALIDANLRLGLALAEDEI 187
Query: 291 QYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQ 350
Y F + + RNP +EL+ AQ+NSEH RH F +IDGKP ++L +++K+T +
Sbjct: 188 DYLQEAFTK-LGRNPNDIELYMFAQANSEHCRHKIFNADWIIDGKPQPKSLFKMIKNTFE 246
Query: 351 ANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAP 410
P+ + +KDN++ ++G V + R + + +L ETHN P A++P
Sbjct: 247 TTPDYVLSAYKDNAAVMEGSAVGRYFADHNTGRYDFHQ--EPAHILMKVETHNHPTAISP 304
Query: 411 YPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPL 470
+PGA TG+GG IRD ATGRG+ A G+ V NL + G PWE+ F P + + L
Sbjct: 305 WPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEE-DFGKPERIVTAL 363
Query: 471 QILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSG---QRREWLKPIMFSGGIGQIDHN 527
I+ + G + + N+FG P + GY RT+ ++ S + R + KPIM +GGIG I +
Sbjct: 364 DIMTEGPLGGAAFNNEFGRPALTGYFRTYEEKVNSHNGEELRGYHKPIMLAGGIGNIRAD 423
Query: 528 HISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYR 587
H+ KGE +G ++ +GGPA IG+GGGAASSM SGQ+DADLDF +VQR + EM ++
Sbjct: 424 HVQKGEIVVGAKLIVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRCQE 483
Query: 588 VVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYP--KGAEIDIRAIIVGDHTLSVLEIW 645
V+ C ++G+ NPI+ IHD GAGG N + E++ +G + ++R I+ + +S LEIW
Sbjct: 484 VIDRCWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIW 543
Query: 646 GAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLP 705
E QE+ + V + L +C+RER AVIG + E + L D+ +
Sbjct: 544 CNESQERYVLAVAADQLPLFDELCKRERAPYAVIGDATEEQHLSLHDNHFDNQ------- 596
Query: 706 PPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRF 765
+DL L+ +LG P+ T + + L+ A IT+ D++ RVL LP+V K F
Sbjct: 597 ----PIDLPLDVLLGKTPKMTRDVQTLKAKGDALNRA-DITIADAVNRVLHLPTVAEKTF 651
Query: 766 LTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAM 825
L T DR VTG+VA+ Q VGP Q+ +AD AV + G A +IGE+ LL+ A
Sbjct: 652 LVTIGDRTVTGMVARDQMVGPWQVPVADCAVTTASLDSYYGEAMSIGERAPVALLDFAAS 711
Query: 826 ARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMI-ELGIA 884
ARLAVGEALTN+ ++ + +K S NWM AA GE A +YDA A+ E + +LG+
Sbjct: 712 ARLAVGEALTNIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYDAVKAVGEELCPQLGLT 771
Query: 885 IDGGKDSLSMAA--YSGGEV--VKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHID 940
I GKDS+SM G E + +P SLVIS + D+ T+TP L D+ +LL ID
Sbjct: 772 IPVGKDSMSMKTRWQEGNEQREMTSPLSLVISAFARVEDVRHTLTPQLSTEDNALLL-ID 830
Query: 941 LAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGL 1000
L KG LG +ALAQV+ Q+G++ D+ DV LK ++ +Q L+ + HD SDGGL
Sbjct: 831 LGKGHNALGATALAQVYRQLGDKPADVRDVAQLKGFYDAMQVLVAARKLLAWHDRSDGGL 890
Query: 1001 LVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVS- 1059
LV EM+FAG+ G+ +D+ + G+ LF EELG V++V + D V L G++
Sbjct: 891 LVTLAEMAFAGHCGVQVDIAALGDDHLAALFNEELGGVIQVRAEDRDAVETLLAQYGLAD 950
Query: 1060 -AEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLK 1118
+GQ + I + T +E + LR W ET++++++ + C + E E
Sbjct: 951 CVHYLGQALAGDRFVITANDRTVFSESRTTLRVWWAETTWQMQRLRDNPQCADQEHEAKA 1010
Query: 1119 SRCEPLWKLSFTPSLTDE---KYMNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDV 1175
+ +P + + + ++ Y+ ++PKVAV+RE+G N EM+AAF+ AGF+ DV
Sbjct: 1011 NDADPGLNVKLSFDINEDIAAPYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDV 1070
Query: 1176 TMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTF 1235
MSDL+ G I L F +V GGFSY DVL + +GW+ SI FN + ++F+ F+ RP T
Sbjct: 1071 HMSDLLGGRIGLGNFHALVACGGFSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTL 1130
Query: 1236 SLGVCNGCQLMA-LLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPA 1294
+LGVCNGCQ+M+ L IPG ++ PRFV N S RFE RFS V + SP+
Sbjct: 1131 ALGVCNGCQMMSNLRELIPGSEL-----------WPRFVRNHSDRFEARFSLVEVTQSPS 1179
Query: 1295 IMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNG 1354
++L+GM GS + + +HGEGR DD L + L +RY D+ G TE YP N NG
Sbjct: 1180 LLLQGMVGSQMPIAVSHGEGRVEVRDDAHLAALESKGLVALRYVDNFGKVTETYPANPNG 1239
Query: 1355 SPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 1411
SP G+ A+ + +GR MMPHPER F W+P+NW D SPW+++F+NAR+
Sbjct: 1240 SPNGITAVTTENGRVTIMMPHPERVFRTVANSWHPENWGED----SPWMRIFRNARK 1292
|
Salmonella typhi (taxid: 90370) EC: 6 EC: . EC: 3 EC: . EC: 5 EC: . EC: 3 |
| >sp|Q57LE6|PUR4_SALCH Phosphoribosylformylglycinamidine synthase OS=Salmonella choleraesuis (strain SC-B67) GN=purL PE=3 SV=3 | Back alignment and function description |
|---|
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/1253 (38%), Positives = 711/1253 (56%), Gaps = 53/1253 (4%)
Query: 178 IVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVH 237
++ V PR + WS+ A I CGL +V RLER Y + L Q AA +H
Sbjct: 74 LLLVTPRPGTISPWSSKATDIAHNCGLQQVDRLERGVAYYI-EASTLTAEQWRQVAAELH 132
Query: 238 DRMTECVYTEKLTSFETSVV---PEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYT 294
DRM E V+ LT E + P V V ++ GR+AL + N +GLA E ++ Y
Sbjct: 133 DRMMETVFP-SLTDAEKLFIHHQPAPVSSVDLLGEGRQALIDANLRLGLALAEDEIDYLQ 191
Query: 295 RLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPN 354
F + + RNP +EL+ AQ+NSEH RH F +IDGKP ++L +++K+T + P+
Sbjct: 192 EAFTK-LGRNPNDIELYMFAQANSEHCRHKIFNADWIIDGKPQPKSLFKMIKNTFETTPD 250
Query: 355 NSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGA 414
+ +KDN++ ++G V + R + + +L ETHN P A++P+PGA
Sbjct: 251 YVLSAYKDNAAVMEGSAVGRYFADHNTGRYDFHQ--EPAHILMKVETHNHPTAISPWPGA 308
Query: 415 ETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILI 474
TG+GG IRD ATGRG+ A G+ V NL + G PWE+ F P + + L I+
Sbjct: 309 ATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEE-DFGKPERIVTALDIMT 367
Query: 475 DASNGASDYGNKFGEPLIQGYTRTFGMRLPSG---QRREWLKPIMFSGGIGQIDHNHISK 531
+ G + + N+FG P + GY RT+ ++ S + R + KPIM +GGIG I +H+ K
Sbjct: 368 EGPLGGAAFNNEFGRPALTGYFRTYEEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQK 427
Query: 532 GEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRA 591
GE +G ++ +GGPA IG+GGGAASSM SGQ+DADLDF +VQR + EM ++ V+
Sbjct: 428 GEIVVGAKLIVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDR 487
Query: 592 CIEMGETNPIISIHDQGAGGNCNVVKEIIYP--KGAEIDIRAIIVGDHTLSVLEIWGAEY 649
C ++G+ NPI+ IHD GAGG N + E++ +G + ++R I+ + +S LEIW E
Sbjct: 488 CWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNES 547
Query: 650 QEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPP 709
QE+ + V + L +C+RER AVIG + E + L D+ +
Sbjct: 548 QERYVLAVAADQLPLFDELCKRERAPYAVIGDATEEQHLSLHDNHFDNQ----------- 596
Query: 710 AVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTK 769
+DL L+ +LG P+ T + + L+ A IT+ D++ RVL LP+V K FL T
Sbjct: 597 PIDLPLDVLLGKTPKMTRDVQTLKAKGDALNRA-DITIADAVNRVLHLPTVAEKTFLVTI 655
Query: 770 VDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLA 829
DR VTG+VA+ Q VGP Q+ +AD AV + G A +IGE+ LL+ A ARLA
Sbjct: 656 GDRTVTGMVARDQMVGPWQVPVADCAVTTASLDSYYGEAMSIGERAPVALLDFAASARLA 715
Query: 830 VGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMI-ELGIAIDGG 888
VGEALTN+ ++ + +K S NWM AA GE A +YDA A+ E + +LG+ I G
Sbjct: 716 VGEALTNIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYDAVKAVGEELCPQLGLTIPVG 775
Query: 889 KDSLSMAA--YSGGEV--VKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKG 944
KDS+SM G E + +P SLVIS + D+ T+TP L D+ +LL IDL KG
Sbjct: 776 KDSMSMKTRWQEGNEQREMTSPLSLVISAFARVEDVRHTLTPQLSTEDNALLL-IDLGKG 834
Query: 945 KRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCT 1004
LG +ALAQV+ Q+G++ D+ DV LK ++ +Q L+ + HD SDGGLLV
Sbjct: 835 HNALGATALAQVYRQLGDKPADVRDVAQLKGFYDAMQALVAARKLLAWHDRSDGGLLVTL 894
Query: 1005 LEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVS--AEI 1062
EM+FAG+ G+ +D+ + G+ LF EELG V++V + D V L G++
Sbjct: 895 AEMAFAGHCGVQVDIAALGDDHLAALFNEELGGVIQVRAEDRDAVEALLAQYGLADCVHY 954
Query: 1063 IGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLKSRCE 1122
+GQ + I + T +E + LR W ET++++++ + C + E E + +
Sbjct: 955 LGQALAGDRFVITANDQTVFSESRTTLRVWWAETTWQMQRLRDNPQCADQEHEAKANDAD 1014
Query: 1123 PLWKLSFTPSLTDE---KYMNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSD 1179
P + + + ++ Y+ ++PKVAV+RE+G N EM+AAF+ AGF+ DV MSD
Sbjct: 1015 PGLNVKLSFDINEDIAAPYIATGARPKVAVLREQGGNSHVEMAAAFHRAGFDAIDVHMSD 1074
Query: 1180 LINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGV 1239
L+ G I L F +V GGFSY DVL + +GW+ SI FN + ++F+ F+ RP T +LGV
Sbjct: 1075 LLGGRIGLGNFHALVACGGFSYGDVLGAGEGWAKSILFNPRVRDEFETFFHRPQTLALGV 1134
Query: 1240 CNGCQLMA-LLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLK 1298
CNGCQ+M+ L IPG ++ PRFV N S RFE RFS V + SP+++L+
Sbjct: 1135 CNGCQMMSNLRELIPGSEL-----------WPRFVRNHSDRFEARFSLVEVTQSPSLLLQ 1183
Query: 1299 GMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLG 1358
GM GS + + +HGEGR DD L + L +RY D+ G TE YP N NGSP G
Sbjct: 1184 GMVGSQMPIAVSHGEGRVEVRDDAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNG 1243
Query: 1359 VAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 1411
+ A+ + +GR MMPHPER F W+P+NW D SPW+++F+NAR+
Sbjct: 1244 ITAVTTENGRVTIMMPHPERVFRTVANSWHPENWGED----SPWMRIFRNARK 1292
|
Salmonella choleraesuis (strain SC-B67) (taxid: 321314) EC: 6 EC: . EC: 3 EC: . EC: 5 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1414 | ||||||
| 255566446 | 1414 | Phosphoribosylformylglycinamidine syntha | 0.999 | 0.999 | 0.848 | 0.0 | |
| 224109478 | 1377 | predicted protein [Populus trichocarpa] | 0.973 | 1.0 | 0.868 | 0.0 | |
| 449526084 | 1413 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.992 | 0.993 | 0.827 | 0.0 | |
| 449460910 | 1413 | PREDICTED: probable phosphoribosylformyl | 0.992 | 0.993 | 0.827 | 0.0 | |
| 356539877 | 1410 | PREDICTED: probable phosphoribosylformyl | 0.990 | 0.993 | 0.819 | 0.0 | |
| 255584941 | 1355 | Phosphoribosylformylglycinamidine syntha | 0.957 | 0.999 | 0.843 | 0.0 | |
| 297842175 | 1410 | hypothetical protein ARALYDRAFT_476563 [ | 0.989 | 0.992 | 0.804 | 0.0 | |
| 186495325 | 1407 | phosphoribosylformylglycinamidine syntha | 0.987 | 0.992 | 0.805 | 0.0 | |
| 159032992 | 1387 | phosphoribosylformylglycinamidine syntha | 0.969 | 0.988 | 0.816 | 0.0 | |
| 12324901 | 1387 | putative phosphoribosylformylglycinamidi | 0.969 | 0.988 | 0.816 | 0.0 |
| >gi|255566446|ref|XP_002524208.1| Phosphoribosylformylglycinamidine synthase, putative [Ricinus communis] gi|223536485|gb|EEF38132.1| Phosphoribosylformylglycinamidine synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 2531 bits (6559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1201/1415 (84%), Positives = 1305/1415 (92%), Gaps = 2/1415 (0%)
Query: 1 MSGLKEITAITEADFLQGTHRNTLFLNGNSAI-KRKNLLWGALSNQNSKFGISNRKSVSL 59
M G+ EI + + FLQ + R TL L I KR LLWG L N S ++RK VSL
Sbjct: 1 MVGVGEINSAS-TQFLQNSSRQTLLLQRYLCIDKRNQLLWGTLRNWKSPLHFADRKGVSL 59
Query: 60 KCCAQSKPRAVVSGDKTASVDEQPNLSEKPAQEVVHFYRIPLLQDSAAAELLKSVQKKIS 119
+CCAQS+PRAV+SG T+SVDEQ +L +KPAQE+VHFYR+PL+Q+SAA +LLKSVQ KIS
Sbjct: 60 RCCAQSEPRAVISGGVTSSVDEQSSLIKKPAQEIVHFYRVPLIQESAALDLLKSVQTKIS 119
Query: 120 NQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQKGLKAVIV 179
N+IVGL+TE CFN+GL S IS++KL L+WLLQETYEPENLGTESFLEKKK++GL VIV
Sbjct: 120 NEIVGLQTEQCFNVGLQSEISSEKLGDLRWLLQETYEPENLGTESFLEKKKKEGLNTVIV 179
Query: 180 EVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDR 239
EVGPRLSFTTAWSANAVSIC CGLTEV R+ERSRRYLL+S+G LQ++QIN+FAAMVHDR
Sbjct: 180 EVGPRLSFTTAWSANAVSICHACGLTEVNRMERSRRYLLYSRGILQEDQINEFAAMVHDR 239
Query: 240 MTECVYTEKLTSFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKE 299
MTEC YT KL SFETSVVPEEVRFVP+ME GR+ALEEINQEMGLAFDEQDLQYYTRLFKE
Sbjct: 240 MTECAYTHKLISFETSVVPEEVRFVPLMEKGRRALEEINQEMGLAFDEQDLQYYTRLFKE 299
Query: 300 DIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIG 359
DIKRNPTTVELFDIAQSNSEHSRHWFFTGK+VIDG+PM RTLMQIVKSTLQANPNNSVIG
Sbjct: 300 DIKRNPTTVELFDIAQSNSEHSRHWFFTGKMVIDGQPMDRTLMQIVKSTLQANPNNSVIG 359
Query: 360 FKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAG 419
FKDNSSAIKGF VKQLRPVQPG C L+ +++DLD+LFTAETHNFPCAVAPYPGAETGAG
Sbjct: 360 FKDNSSAIKGFTVKQLRPVQPGMTCPLTATTRDLDILFTAETHNFPCAVAPYPGAETGAG 419
Query: 420 GRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNG 479
GRIRDTHATG GSFVVA+TAGYCVGNLNVEGSYAPWED SFTYPSNLASPLQ+LIDASNG
Sbjct: 420 GRIRDTHATGSGSFVVAATAGYCVGNLNVEGSYAPWEDHSFTYPSNLASPLQVLIDASNG 479
Query: 480 ASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGML 539
ASDYGNKFGEPLIQGYTRTFGMRLPSG+RREWLKPIMFSGGIGQIDH HI+KGEPDIGML
Sbjct: 480 ASDYGNKFGEPLIQGYTRTFGMRLPSGERREWLKPIMFSGGIGQIDHTHITKGEPDIGML 539
Query: 540 VVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETN 599
VVKIGGPAYRIGMGGGAASSMVSGQNDA+LDFNAVQRGDAEMAQKLYRVVRACIEMGE N
Sbjct: 540 VVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRVVRACIEMGENN 599
Query: 600 PIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKP 659
PIISIHDQGAGGNCNVVKEIIYPKGA IDIRAI+VGDHT+S+LEIWGAEYQEQDA+LVKP
Sbjct: 600 PIISIHDQGAGGNCNVVKEIIYPKGAVIDIRAIVVGDHTMSILEIWGAEYQEQDAILVKP 659
Query: 660 ESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVL 719
ESRDLLQSIC+RERVSMAV+G I+GEGRVVLVDSAA++ C+SSGLP P PAVDLELE+VL
Sbjct: 660 ESRDLLQSICQRERVSMAVLGAINGEGRVVLVDSAAIENCRSSGLPTPSPAVDLELEKVL 719
Query: 720 GDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVA 779
GDMP+KTFEFH AREPLDIAPGITVM++LKRVLRLPSVCSKRFLTTKVDRCVTGLVA
Sbjct: 720 GDMPRKTFEFHRVVNAREPLDIAPGITVMEALKRVLRLPSVCSKRFLTTKVDRCVTGLVA 779
Query: 780 QQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVW 839
QQQTVGPLQITLADVAVI+Q+YTDLTGGACAIGEQPIKGL+NPKAMARLAVGEALTNLVW
Sbjct: 780 QQQTVGPLQITLADVAVISQSYTDLTGGACAIGEQPIKGLVNPKAMARLAVGEALTNLVW 839
Query: 840 AKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSG 899
A+VTSLS +KASGNWMYAAKLDGEGA MYDAATAL++AMIELGIAIDGGKDSLSMAA++
Sbjct: 840 ARVTSLSDIKASGNWMYAAKLDGEGADMYDAATALSDAMIELGIAIDGGKDSLSMAAHAA 899
Query: 900 GEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQ 959
GEVVKAPG+LVISVYVTCPDITKTVTPDLKLGDDG+LLHIDLAKG+RRLG SALAQ FDQ
Sbjct: 900 GEVVKAPGNLVISVYVTCPDITKTVTPDLKLGDDGVLLHIDLAKGERRLGASALAQAFDQ 959
Query: 960 VGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDL 1019
VG++ PDLED+ YLKRVFE VQDLI DEL+S+GHDISDGGLLVC +EM+FAGN G LD
Sbjct: 960 VGDDCPDLEDISYLKRVFEGVQDLIEDELISSGHDISDGGLLVCAMEMAFAGNCGTVLDF 1019
Query: 1020 NSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGL 1079
S G SLFQTLFAEELGL+LEVS+ NLDTV + L+ GVSA+I+GQV +S +E+KVDG
Sbjct: 1020 ASCGKSLFQTLFAEELGLLLEVSRKNLDTVIENLNKVGVSADIVGQVTTSPLIELKVDGE 1079
Query: 1080 THLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYM 1139
THLN +TS LRDMWEETSF+LEKFQRLASCV+SEKEGLKSR EP W+LSFTPS TDEKYM
Sbjct: 1080 THLNNETSSLRDMWEETSFQLEKFQRLASCVDSEKEGLKSRHEPFWRLSFTPSFTDEKYM 1139
Query: 1140 NATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGF 1199
AT KPKVAVIREEGSNGDREM+AAFYAAGFEPWD+TMSDL+NG ISL EFRGIVFVGGF
Sbjct: 1140 TATLKPKVAVIREEGSNGDREMAAAFYAAGFEPWDITMSDLLNGGISLHEFRGIVFVGGF 1199
Query: 1200 SYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGG 1259
SYADVLDSAKGWSASIRFNQ LLNQFQEFYK+PDTFSLGVCNGCQLMALLGW+PGPQVGG
Sbjct: 1200 SYADVLDSAKGWSASIRFNQSLLNQFQEFYKQPDTFSLGVCNGCQLMALLGWVPGPQVGG 1259
Query: 1260 VHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFP 1319
V GAGGDPSQPRF+HNESGRFECRF++VTI+DSPAIMLKGMEGSTLGVWAAHGEGRAYFP
Sbjct: 1260 VLGAGGDPSQPRFIHNESGRFECRFTNVTIKDSPAIMLKGMEGSTLGVWAAHGEGRAYFP 1319
Query: 1320 DDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERC 1379
DDGV DR++HS LAPVRYCDDDGNPTE YPFNVNGSPLGVAAICSPDGRHLAMMPHPERC
Sbjct: 1320 DDGVFDRVVHSDLAPVRYCDDDGNPTETYPFNVNGSPLGVAAICSPDGRHLAMMPHPERC 1379
Query: 1380 FLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS 1414
FLMWQ+PWYPK W+VD KGPSPWLKMFQNAREWCS
Sbjct: 1380 FLMWQFPWYPKRWDVDGKGPSPWLKMFQNAREWCS 1414
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224109478|ref|XP_002315209.1| predicted protein [Populus trichocarpa] gi|222864249|gb|EEF01380.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 2521 bits (6533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1196/1377 (86%), Positives = 1285/1377 (93%)
Query: 38 LWGALSNQNSKFGISNRKSVSLKCCAQSKPRAVVSGDKTASVDEQPNLSEKPAQEVVHFY 97
LWG L N FG+SN++ VSL+C AQSKPRA VSG T+SVDEQ + EKP QE++HFY
Sbjct: 1 LWGTLRNHKIAFGVSNKRGVSLRCRAQSKPRAFVSGAGTSSVDEQSSFIEKPVQELIHFY 60
Query: 98 RIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYEP 157
RIPL+Q+SA ELLKS Q K+SN+IVGL+TE CFNIG+ S +S++KL L+WLLQETYEP
Sbjct: 61 RIPLIQESATLELLKSAQTKVSNKIVGLQTEQCFNIGIQSGVSSQKLGCLRWLLQETYEP 120
Query: 158 ENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYL 217
ENLGTESFLEKK ++G+ AVIVEVGPRLSFTTAWSANAVSICR CGLTEVTRLERSRRYL
Sbjct: 121 ENLGTESFLEKKTKEGVNAVIVEVGPRLSFTTAWSANAVSICRACGLTEVTRLERSRRYL 180
Query: 218 LFSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRFVPVMENGRKALEEI 277
L+SKG L D QIN+FAAMVHDRMTECVYT+KL SF+ SVVPEEVR VPVME GRKALEEI
Sbjct: 181 LYSKGVLPDYQINEFAAMVHDRMTECVYTQKLMSFDASVVPEEVRHVPVMERGRKALEEI 240
Query: 278 NQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPM 337
NQEMGLAFDEQDLQYYTRLF+EDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDG+ M
Sbjct: 241 NQEMGLAFDEQDLQYYTRLFREDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGQHM 300
Query: 338 VRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLF 397
RTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPG C L+ +DLD+LF
Sbjct: 301 DRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGLTCPLNVIDRDLDILF 360
Query: 398 TAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWED 457
TAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLN+EGSYAPWED
Sbjct: 361 TAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNIEGSYAPWED 420
Query: 458 PSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMF 517
SF YPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSG+RREWLKPIMF
Sbjct: 421 NSFAYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGERREWLKPIMF 480
Query: 518 SGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRG 577
SGGIGQIDH HI+KGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRG
Sbjct: 481 SGGIGQIDHTHITKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRG 540
Query: 578 DAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGDH 637
DAEMAQKLYRVVR+CIEMGE NPIISIHDQGAGGNCNVVKEIIYPKGA+IDIRAI++GDH
Sbjct: 541 DAEMAQKLYRVVRSCIEMGEDNPIISIHDQGAGGNCNVVKEIIYPKGAQIDIRAIVIGDH 600
Query: 638 TLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQ 697
T+SVLEIWGAEYQEQDA+LVK ESRDLLQSIC+RERVSMAVIGTISGEGRVVLVDS+A++
Sbjct: 601 TMSVLEIWGAEYQEQDAILVKAESRDLLQSICKRERVSMAVIGTISGEGRVVLVDSSAIE 660
Query: 698 KCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRL 757
KC+++GLPPPPPAVDLELE+VLGDMPQK+FEFH AREPLDIAPGITVMD+LKRVLRL
Sbjct: 661 KCRANGLPPPPPAVDLELEKVLGDMPQKSFEFHRVVPAREPLDIAPGITVMDALKRVLRL 720
Query: 758 PSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIK 817
PSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIK
Sbjct: 721 PSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIK 780
Query: 818 GLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEA 877
GL+NPKAMARLAVGEALTNLVWAKVTSLS VKASGNWMYAAKLDGEGA MYDAATAL+EA
Sbjct: 781 GLVNPKAMARLAVGEALTNLVWAKVTSLSDVKASGNWMYAAKLDGEGADMYDAATALSEA 840
Query: 878 MIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILL 937
MIELGIAIDGGKDSLSMAA++GGEVVKAPG+LVIS YVTCPDITKTVTPDLKLGD+G+LL
Sbjct: 841 MIELGIAIDGGKDSLSMAAHAGGEVVKAPGNLVISAYVTCPDITKTVTPDLKLGDEGVLL 900
Query: 938 HIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISD 997
HIDLAKGKRRLGGSALAQ F QVG++ PDL+DV YLK+ FE+VQDLI DE++S+GHDISD
Sbjct: 901 HIDLAKGKRRLGGSALAQAFGQVGDDCPDLDDVSYLKKTFESVQDLISDEIISSGHDISD 960
Query: 998 GGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAG 1057
GGLLVC LEM+FAGN GI LDL S+ S F+TLFAEELGLVLEVS+ NLD V +KL+ AG
Sbjct: 961 GGLLVCALEMAFAGNCGILLDLTSKRESHFETLFAEELGLVLEVSRKNLDIVMQKLYSAG 1020
Query: 1058 VSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGL 1117
VS EIIGQV +S +E+KVDG+T L E+TS LRD WEETSF LEKFQRLASCV+ EKEGL
Sbjct: 1021 VSGEIIGQVTASPLIELKVDGVTCLKEETSFLRDTWEETSFHLEKFQRLASCVDLEKEGL 1080
Query: 1118 KSRCEPLWKLSFTPSLTDEKYMNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTM 1177
KSR EP W++SFTPS TDEKYM ATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWD+T
Sbjct: 1081 KSRHEPTWRMSFTPSFTDEKYMIATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDITT 1140
Query: 1178 SDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSL 1237
SDL+NG ISL +FRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFY+RPDTFSL
Sbjct: 1141 SDLLNGVISLHDFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYRRPDTFSL 1200
Query: 1238 GVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIML 1297
GVCNGCQLMALLGW+PGPQVGGV GAGGDP+QPRFVHNESGRFECRF+SVTIEDSPAIM
Sbjct: 1201 GVCNGCQLMALLGWVPGPQVGGVFGAGGDPAQPRFVHNESGRFECRFTSVTIEDSPAIMF 1260
Query: 1298 KGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPL 1357
KGMEGSTLGVWAAHGEGRAYFPDDGVLDR++HS+LAPVRYCDDDGNPTEVYPFNVNGSPL
Sbjct: 1261 KGMEGSTLGVWAAHGEGRAYFPDDGVLDRVIHSNLAPVRYCDDDGNPTEVYPFNVNGSPL 1320
Query: 1358 GVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS 1414
GVAAICSPDGRHLAMMPHPERCFLMWQ+PWYP WNVDKKGPSPWLKMFQNAREWCS
Sbjct: 1321 GVAAICSPDGRHLAMMPHPERCFLMWQFPWYPTQWNVDKKGPSPWLKMFQNAREWCS 1377
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449526084|ref|XP_004170044.1| PREDICTED: LOW QUALITY PROTEIN: probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2461 bits (6378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1163/1405 (82%), Positives = 1275/1405 (90%), Gaps = 1/1405 (0%)
Query: 10 ITEADFLQGTHRNTLFLNGNSAIKRKNLLWGALSNQNSKFGISNRKSVSLKCCAQSKPRA 69
IT ADFLQG R +LFL S KR+ L WG L S+R+ V L+C A SK RA
Sbjct: 7 ITAADFLQGGRRQSLFLQSYSHCKRRGL-WGTLRTSAVGSVNSSRRYVPLRCRASSKSRA 65
Query: 70 VVSGDKTASVDEQPNLSEKPAQEVVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEH 129
V + VDE +L EKP EVVHF+R+PL+Q+SA +ELLKSVQ KISNQI+GL+TE
Sbjct: 66 VECKVVASPVDEASSLVEKPTAEVVHFFRVPLIQESATSELLKSVQSKISNQIIGLQTEQ 125
Query: 130 CFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTT 189
CFN+G+ S IS KL VL+WLLQETYEPEN GTESFLEKK++KGL ++IVEVGPRLSFTT
Sbjct: 126 CFNVGIQSEISNDKLFVLRWLLQETYEPENFGTESFLEKKQRKGLDSIIVEVGPRLSFTT 185
Query: 190 AWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKL 249
AWS+NAVSIC+ CGLTEVTR+ERSRRYLL+SKGAL+D QIN+FAAMVHDRMTECVY ++L
Sbjct: 186 AWSSNAVSICQACGLTEVTRMERSRRYLLYSKGALEDQQINEFAAMVHDRMTECVYVQRL 245
Query: 250 TSFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVE 309
SFETSV+PEE RFVPV+E GRKALEEINQEMGLAFDEQDLQYYT+LF E+IKRNPTTVE
Sbjct: 246 RSFETSVIPEEFRFVPVLERGRKALEEINQEMGLAFDEQDLQYYTKLFSEEIKRNPTTVE 305
Query: 310 LFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKG 369
LFDIAQSNSEHSRHW FTGK+VIDGKPM RTLMQIVK TL+ANPNNSVIGFKDNSSAI+G
Sbjct: 306 LFDIAQSNSEHSRHWXFTGKLVIDGKPMSRTLMQIVKGTLKANPNNSVIGFKDNSSAIRG 365
Query: 370 FPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATG 429
F QLRPV PGS L ESS+DLD+LFTAETHNFPCAVAPYPGAETG GGRIRDTHATG
Sbjct: 366 FLANQLRPVSPGSTSPLEESSRDLDILFTAETHNFPCAVAPYPGAETGVGGRIRDTHATG 425
Query: 430 RGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGE 489
+GSFVVA+TAGYCVGNLN+EGSYAPWED SF YP NLASPL+ILIDASNGASDYGNKFGE
Sbjct: 426 KGSFVVAATAGYCVGNLNMEGSYAPWEDSSFAYPPNLASPLKILIDASNGASDYGNKFGE 485
Query: 490 PLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYR 549
PLIQGYTRTFGMRLP+G+RREWLKPIMFSG IGQIDH HISK EPDIGMLVVKIGGPAYR
Sbjct: 486 PLIQGYTRTFGMRLPNGERREWLKPIMFSGAIGQIDHFHISKEEPDIGMLVVKIGGPAYR 545
Query: 550 IGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGA 609
IGMGGGAASSMVSGQNDA+LDFNAVQRGDAEMAQKLYRVVRAC+EMGE NPIISIHDQGA
Sbjct: 546 IGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRVVRACVEMGENNPIISIHDQGA 605
Query: 610 GGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSIC 669
GGNCNVVKEIIYPKGAEIDIRAI+VGDHT+SVLEIWGAEYQEQDA+LVKPESR LLQSIC
Sbjct: 606 GGNCNVVKEIIYPKGAEIDIRAIVVGDHTMSVLEIWGAEYQEQDAILVKPESRSLLQSIC 665
Query: 670 ERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEF 729
+RER+SMAVIG ISG GR VLVDS A +KC S+GLPPPPPAVDLELE+VLGDMPQKTFEF
Sbjct: 666 DRERLSMAVIGVISGHGRCVLVDSIATKKCISNGLPPPPPAVDLELEKVLGDMPQKTFEF 725
Query: 730 HHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQI 789
A EPL+IAPG++V DSL RVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQI
Sbjct: 726 QRVVNALEPLEIAPGVSVADSLNRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQI 785
Query: 790 TLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVK 849
TLADVAVIAQ+Y+ LTGGACAIGEQPIKGLL+PKAMARLAVGEALTNLVWAK+T LS VK
Sbjct: 786 TLADVAVIAQSYSGLTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKITHLSDVK 845
Query: 850 ASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSL 909
ASGNWMYAAKLDGEGAAMYDAA AL+EAMIELGIAIDGGKDSLSMAA +GGEVVKAPG+L
Sbjct: 846 ASGNWMYAAKLDGEGAAMYDAAVALSEAMIELGIAIDGGKDSLSMAAQAGGEVVKAPGNL 905
Query: 910 VISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLED 969
VIS YVTCPDITKTVTPDLKLGD+G++LHIDL KG+RRLGGSALA FDQ+G+ PDL+D
Sbjct: 906 VISAYVTCPDITKTVTPDLKLGDNGVILHIDLGKGERRLGGSALAHAFDQIGDVCPDLDD 965
Query: 970 VPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQT 1029
VPY K+VFE++QDL+ EL+S GHDISDGGLLV LEM+FAGN GI+LDL S G SLFQT
Sbjct: 966 VPYFKKVFESIQDLLAKELISAGHDISDGGLLVSALEMAFAGNCGISLDLTSRGKSLFQT 1025
Query: 1030 LFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLL 1089
L+AEELGLVLEVSK NLD V ++L AGV+A+IIGQV S+ ++E+ VD ++HLNE+TS+L
Sbjct: 1026 LYAEELGLVLEVSKENLDVVLRELTTAGVTADIIGQVTSTPTIEVMVDKVSHLNEETSVL 1085
Query: 1090 RDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAV 1149
RD+WE TSFELEK QRLASCVESEKEGLKSR EPLW+LSF PS TDEKY+++T KPKVAV
Sbjct: 1086 RDVWEATSFELEKLQRLASCVESEKEGLKSRHEPLWELSFVPSFTDEKYLSSTFKPKVAV 1145
Query: 1150 IREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAK 1209
IREEGSNGDREMSAAFYA+GFEPWDVTMSDL+NG I+L +FRGIVFVGGFSYADVLDSAK
Sbjct: 1146 IREEGSNGDREMSAAFYASGFEPWDVTMSDLLNGNITLQQFRGIVFVGGFSYADVLDSAK 1205
Query: 1210 GWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQ 1269
GWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGW+PGPQVGGVHGAGGDPSQ
Sbjct: 1206 GWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWVPGPQVGGVHGAGGDPSQ 1265
Query: 1270 PRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILH 1329
PRF+HNESGRFECRF+SVTI+DSPAIM +GMEGS+LGVWAAHGEGRAYFPDDGVLDR+LH
Sbjct: 1266 PRFIHNESGRFECRFTSVTIKDSPAIMFRGMEGSSLGVWAAHGEGRAYFPDDGVLDRLLH 1325
Query: 1330 SHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYP 1389
S+LAP+RYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQ+PWYP
Sbjct: 1326 SNLAPLRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQFPWYP 1385
Query: 1390 KNWNVDKKGPSPWLKMFQNAREWCS 1414
K WNV K+GPSPWL+MFQNAREWCS
Sbjct: 1386 KQWNVSKEGPSPWLRMFQNAREWCS 1410
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449460910|ref|XP_004148187.1| PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2459 bits (6372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1162/1405 (82%), Positives = 1274/1405 (90%), Gaps = 1/1405 (0%)
Query: 10 ITEADFLQGTHRNTLFLNGNSAIKRKNLLWGALSNQNSKFGISNRKSVSLKCCAQSKPRA 69
IT ADFLQG R +LFL S KR+ L WG L S+R+ V L+C A SK RA
Sbjct: 7 ITAADFLQGGRRQSLFLQSYSHCKRRGL-WGTLRTSAVGSVNSSRRYVPLRCRASSKSRA 65
Query: 70 VVSGDKTASVDEQPNLSEKPAQEVVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEH 129
V + VDE +L EKP EVVHF+R+PL+Q+SA +ELLKSVQ KISNQI+GL+TE
Sbjct: 66 VECKVVASPVDEASSLVEKPTAEVVHFFRVPLIQESATSELLKSVQSKISNQIIGLQTEQ 125
Query: 130 CFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTT 189
CFN+G+ S IS KL VL+WLLQETYEPEN GTESFLEKK++KGL ++IVEVGPRLSFTT
Sbjct: 126 CFNVGIQSEISNDKLFVLRWLLQETYEPENFGTESFLEKKQRKGLDSIIVEVGPRLSFTT 185
Query: 190 AWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKL 249
AWS+NAVSIC+ CGLTEVTR+ERSRRYLL+SKGAL+D QIN+FAAMVHDRMTECVY ++L
Sbjct: 186 AWSSNAVSICQACGLTEVTRMERSRRYLLYSKGALEDQQINEFAAMVHDRMTECVYVQRL 245
Query: 250 TSFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVE 309
SFETSV+PEE RFVPV+E GRKALEEINQEMGLAFDEQDLQYYT+LF E+IKRNPTTVE
Sbjct: 246 RSFETSVIPEEFRFVPVLERGRKALEEINQEMGLAFDEQDLQYYTKLFSEEIKRNPTTVE 305
Query: 310 LFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKG 369
LFDIAQSNSEHSRHWFFTGK+VIDGKPM RTLMQIVK TL+ANPNNSVIGFKDNSSAI+G
Sbjct: 306 LFDIAQSNSEHSRHWFFTGKLVIDGKPMSRTLMQIVKGTLKANPNNSVIGFKDNSSAIRG 365
Query: 370 FPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATG 429
F QLRPV PGS L ESS+DLD+LFTAETHNFPCAVAPYPGAETG GGRIRDTHATG
Sbjct: 366 FLANQLRPVSPGSTSPLEESSRDLDILFTAETHNFPCAVAPYPGAETGVGGRIRDTHATG 425
Query: 430 RGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGE 489
+GSFVVA+TAGYCVGNLN+EGSYAPWED SF YP NLASPL+ILIDASNGASDYGNKFGE
Sbjct: 426 KGSFVVAATAGYCVGNLNMEGSYAPWEDSSFAYPPNLASPLKILIDASNGASDYGNKFGE 485
Query: 490 PLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYR 549
PLIQGYTRTFGMRLP+G+RREWLKPIMFSG IGQIDH HISK EPDIGMLVVKIGGPAYR
Sbjct: 486 PLIQGYTRTFGMRLPNGERREWLKPIMFSGAIGQIDHFHISKEEPDIGMLVVKIGGPAYR 545
Query: 550 IGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGA 609
IGMGGGAASSMVSGQNDA+LDFNAVQRGDAEMAQKLYRVVR C+EMGE NPIISIHDQGA
Sbjct: 546 IGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRVVRTCVEMGENNPIISIHDQGA 605
Query: 610 GGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSIC 669
GGNCNVVKEIIYPKGAEIDIRAI+VGDHT+SVLEIWGAEYQEQDA+LVKPESR LLQSIC
Sbjct: 606 GGNCNVVKEIIYPKGAEIDIRAIVVGDHTMSVLEIWGAEYQEQDAILVKPESRSLLQSIC 665
Query: 670 ERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEF 729
+RER+SMAVIG ISG GR VLVDS A +KC S+GLPPPPPAVDLELE+VLGDMPQKTFEF
Sbjct: 666 DRERLSMAVIGVISGHGRCVLVDSIATKKCISNGLPPPPPAVDLELEKVLGDMPQKTFEF 725
Query: 730 HHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQI 789
A E L+IAPG++V DSL RVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQI
Sbjct: 726 QRVVNALELLEIAPGVSVADSLNRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQI 785
Query: 790 TLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVK 849
TLADVAVIAQ+Y+ LTGGACAIGEQPIKGLL+PKAMARLAVGEALTNLVWAK+T LS VK
Sbjct: 786 TLADVAVIAQSYSGLTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKITHLSDVK 845
Query: 850 ASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSL 909
ASGNWMYAAKLDGEGAAMYDAA AL+EAMIELGIAIDGGKDSLSMAA +GGEVVKAPG+L
Sbjct: 846 ASGNWMYAAKLDGEGAAMYDAAVALSEAMIELGIAIDGGKDSLSMAAQAGGEVVKAPGNL 905
Query: 910 VISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLED 969
VIS YVTCPDITKTVTPDLKLGD+G++LHIDL KG+RRLGGSALA FDQ+G+ PDL+D
Sbjct: 906 VISAYVTCPDITKTVTPDLKLGDNGVILHIDLGKGERRLGGSALAHAFDQIGDVCPDLDD 965
Query: 970 VPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQT 1029
VPY K+VFE++QDL+ EL+S GHDISDGGLLV LEM+FAGN GI+LDL S G SLFQT
Sbjct: 966 VPYFKKVFESIQDLLAKELISAGHDISDGGLLVSALEMAFAGNCGISLDLTSRGKSLFQT 1025
Query: 1030 LFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLL 1089
L+AEELGLVLEVSK NLD V ++L AGV+A+IIGQV S+ ++E+ VD ++HLNE+TS+L
Sbjct: 1026 LYAEELGLVLEVSKENLDVVLRELTTAGVTADIIGQVTSTPTIEVMVDKVSHLNEETSVL 1085
Query: 1090 RDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAV 1149
RD+WE TSFELEK QRLASCVESEKEGLKSR EPLW+LSF PS TDEKY+++T KPKVAV
Sbjct: 1086 RDVWEATSFELEKLQRLASCVESEKEGLKSRHEPLWELSFVPSFTDEKYLSSTFKPKVAV 1145
Query: 1150 IREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAK 1209
IREEGSNGDREMSAAFYA+GFEPWDVTMSDL+NG I+L +FRGIVFVGGFSYADVLDSAK
Sbjct: 1146 IREEGSNGDREMSAAFYASGFEPWDVTMSDLLNGNITLQQFRGIVFVGGFSYADVLDSAK 1205
Query: 1210 GWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQ 1269
GWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGW+PGPQVGGVHGAGGDPSQ
Sbjct: 1206 GWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWVPGPQVGGVHGAGGDPSQ 1265
Query: 1270 PRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILH 1329
PRF+HNESGRFECRF+SVTI+DSPAIM +GMEGS+LGVWAAHGEGRAYFPDDGVLDR+LH
Sbjct: 1266 PRFIHNESGRFECRFTSVTIKDSPAIMFRGMEGSSLGVWAAHGEGRAYFPDDGVLDRLLH 1325
Query: 1330 SHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYP 1389
S+LAP+RYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQ+PWYP
Sbjct: 1326 SNLAPLRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQFPWYP 1385
Query: 1390 KNWNVDKKGPSPWLKMFQNAREWCS 1414
K WNV K+GPSPWL+MFQNAREWCS
Sbjct: 1386 KQWNVSKEGPSPWLRMFQNAREWCS 1410
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356539877|ref|XP_003538419.1| PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2415 bits (6260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1149/1402 (81%), Positives = 1265/1402 (90%), Gaps = 1/1402 (0%)
Query: 13 ADFLQGTHRNTLFLNGNSAIKRKNLLWGALSNQNSKFGISNRKSVSLKCCAQSKPRAVVS 72
+ FLQGT R TLFL +R+++ WGAL N+N G S +++ L+C AQ PRAVVS
Sbjct: 10 SQFLQGTSRQTLFLKKKPQRQRRSMFWGALWNRNWALG-STHRALPLRCQAQENPRAVVS 68
Query: 73 GDKTASVDEQPNLSEKPAQEVVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFN 132
G ++SV+EQP L EKPA EVVH YR+P +Q SAAAELLK Q KIS QIV ++TE C+N
Sbjct: 69 GGVSSSVEEQPALVEKPASEVVHLYRVPFMQASAAAELLKEAQVKISGQIVEIQTEQCYN 128
Query: 133 IGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWS 192
+GL S++S K VL+WLLQET+EPENLGTESFLEKKK++GL VIVEVGPRLSFTTAWS
Sbjct: 129 VGLSSQLSGGKFSVLRWLLQETFEPENLGTESFLEKKKKEGLSPVIVEVGPRLSFTTAWS 188
Query: 193 ANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKLTSF 252
NAV+IC+ CGLTEV RLERSRRYLLF+ LQD QINDF +MVHDRMTECVY +KLTSF
Sbjct: 189 TNAVAICQACGLTEVNRLERSRRYLLFTTTELQDYQINDFTSMVHDRMTECVYVQKLTSF 248
Query: 253 ETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFD 312
ETSVVPEE+R++PVME GRKALEEIN EMG AFD+QDL+YYT+LF+EDIKRNPT VELFD
Sbjct: 249 ETSVVPEEIRYIPVMEKGRKALEEINLEMGFAFDDQDLEYYTKLFREDIKRNPTNVELFD 308
Query: 313 IAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPV 372
IAQSNSEHSRHWFFTG I IDG+P+ RTLMQIVKSTLQANPNNSVIGFKDNSSAI+GFPV
Sbjct: 309 IAQSNSEHSRHWFFTGNIFIDGQPVNRTLMQIVKSTLQANPNNSVIGFKDNSSAIRGFPV 368
Query: 373 KQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGS 432
KQLRPVQPGS C L + +LD+LFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGS
Sbjct: 369 KQLRPVQPGSACPLEVAVHELDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGS 428
Query: 433 FVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLI 492
FV A+TAGYCVGNLN G YAPWED SFTYPSNLA PLQILID+SNGASDYGNKFGEPLI
Sbjct: 429 FVQAATAGYCVGNLNTPGFYAPWEDSSFTYPSNLAPPLQILIDSSNGASDYGNKFGEPLI 488
Query: 493 QGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGM 552
QG+ RTFGMRLPSG+RREWLKPIMFS GIGQIDH HISKGEPDIGMLVVKIGGPAYRIGM
Sbjct: 489 QGFCRTFGMRLPSGERREWLKPIMFSAGIGQIDHLHISKGEPDIGMLVVKIGGPAYRIGM 548
Query: 553 GGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGN 612
GGGAASSMVSGQNDA+LDFNAVQRGDAEMAQKLYR+VRACIEMG+ NPIISIHDQGAGGN
Sbjct: 549 GGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRLVRACIEMGDKNPIISIHDQGAGGN 608
Query: 613 CNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERE 672
CNVVKEIIYPKGAEID+RAI+VGDHT+SVLEIWGAEYQEQDA+LVKPESRDLL+SIC RE
Sbjct: 609 CNVVKEIIYPKGAEIDVRAIVVGDHTMSVLEIWGAEYQEQDAILVKPESRDLLESICNRE 668
Query: 673 RVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHA 732
+VSMAVIGTISG+GRVVLVDS AVQK S+GL PPPAVDLELE+VLGDMP+KTF+F+
Sbjct: 669 KVSMAVIGTISGDGRVVLVDSVAVQKSISNGLTSPPPAVDLELEKVLGDMPKKTFKFNRV 728
Query: 733 DQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLA 792
REPLDIAPGI V+DSLKRVL LPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQI +A
Sbjct: 729 VYEREPLDIAPGIEVIDSLKRVLSLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPIA 788
Query: 793 DVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASG 852
DVAV AQT+ D+TGGACAIGEQPIKGLL+PKAMARLAVGEALTNLVWAKVTSLS VKASG
Sbjct: 789 DVAVTAQTFVDVTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTSLSDVKASG 848
Query: 853 NWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVIS 912
NWMYAAKLDGEGA MYDAA +L+EAMIELGIAIDGGKDSLSMAA++ EVVKAPG+LVIS
Sbjct: 849 NWMYAAKLDGEGADMYDAAISLSEAMIELGIAIDGGKDSLSMAAHAESEVVKAPGNLVIS 908
Query: 913 VYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPY 972
VYVTCPDITKTVTPDLKL DDGILLHIDL+KGKRRLGGSALAQ FDQVG+E PDL+DVPY
Sbjct: 909 VYVTCPDITKTVTPDLKLKDDGILLHIDLSKGKRRLGGSALAQAFDQVGDECPDLDDVPY 968
Query: 973 LKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFA 1032
LK+ FE VQDL+ DEL+S GHDISDGGLLVC LEM+FAGN G++LDL S+G SLFQTL+A
Sbjct: 969 LKKAFEGVQDLLSDELISAGHDISDGGLLVCALEMAFAGNCGLSLDLASQGTSLFQTLYA 1028
Query: 1033 EELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDM 1092
EELGLVLEV+K NL V KL + GVSAEIIGQV ++ S+E+KVDG T+L EKTS+LRD+
Sbjct: 1029 EELGLVLEVNKKNLALVMDKLSNVGVSAEIIGQVTANPSIEVKVDGETYLTEKTSILRDL 1088
Query: 1093 WEETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAVIRE 1152
WEETSF+LEKFQRLASCV+ EKEGLK R EP W+LSFTP+ TD K ++AT KPKVAVIRE
Sbjct: 1089 WEETSFQLEKFQRLASCVDMEKEGLKHRYEPSWELSFTPTFTDGKLLSATIKPKVAVIRE 1148
Query: 1153 EGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWS 1212
EGSNGDREM+AAFYAAGFEPWD+TMSDL+NG ISL +FRGIVFVGGFSYADVLDSAKGWS
Sbjct: 1149 EGSNGDREMAAAFYAAGFEPWDITMSDLLNGKISLQDFRGIVFVGGFSYADVLDSAKGWS 1208
Query: 1213 ASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRF 1272
ASIRFN+ +L QFQEFYKRPDTFSLGVCNGCQLMALLGW+PGPQVGGVHGAGGD SQPRF
Sbjct: 1209 ASIRFNESVLQQFQEFYKRPDTFSLGVCNGCQLMALLGWVPGPQVGGVHGAGGDLSQPRF 1268
Query: 1273 VHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHL 1332
+HNESGRFECRF+SVTI+DSPAIM K M GSTLG+WAAHGEGRAYFPD+GVLDRI+HS L
Sbjct: 1269 IHNESGRFECRFTSVTIKDSPAIMFKDMAGSTLGIWAAHGEGRAYFPDEGVLDRIVHSEL 1328
Query: 1333 APVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNW 1392
AP+RYCDD GNPTE YPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQ+PWYPK W
Sbjct: 1329 APIRYCDDAGNPTEAYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQFPWYPKQW 1388
Query: 1393 NVDKKGPSPWLKMFQNAREWCS 1414
+V+KKGPSPWL+MFQNAREWCS
Sbjct: 1389 DVEKKGPSPWLRMFQNAREWCS 1410
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255584941|ref|XP_002533184.1| Phosphoribosylformylglycinamidine synthase, putative [Ricinus communis] gi|223527008|gb|EEF29198.1| Phosphoribosylformylglycinamidine synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 2399 bits (6217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1144/1357 (84%), Positives = 1243/1357 (91%), Gaps = 3/1357 (0%)
Query: 1 MSGLKEITAITEADFLQGTHRNTLFLNGNSAIKRKN-LLWGALSNQNSKFGISNRKSVSL 59
M+G++EI + FLQG+ R TLFL + I R+N LLWG L N S + RK VSL
Sbjct: 1 MAGVREINS-AATQFLQGSSRQTLFLQRDLCINRRNQLLWGTLRNWKSPLSVGKRKGVSL 59
Query: 60 KCCAQSKPRAVVSGDKTASVDEQPNLSEKPAQEVVHFYRIPLLQDSAAAELLKSVQKKIS 119
+CCAQSKPRAVVSG +S+DEQ +L EK AQE+VHFYR+PL+Q SAA ELLKSVQ +IS
Sbjct: 60 RCCAQSKPRAVVSG-AVSSIDEQSSLIEKSAQEIVHFYRVPLIQGSAALELLKSVQTRIS 118
Query: 120 NQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQKGLKAVIV 179
N IVGL+TE CFN+GL S IS++KL VL+WLLQET+EPENLGTESFLEKKK++GL VIV
Sbjct: 119 NDIVGLQTEQCFNVGLQSEISSEKLGVLRWLLQETFEPENLGTESFLEKKKKEGLNTVIV 178
Query: 180 EVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDR 239
EVGPRLSFTTAWSANAVSICR CGLTEVTR+ERSRRYLLFS+G LQ++QIN+FA MVHDR
Sbjct: 179 EVGPRLSFTTAWSANAVSICRACGLTEVTRMERSRRYLLFSRGVLQEDQINEFAGMVHDR 238
Query: 240 MTECVYTEKLTSFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKE 299
MTEC YT+KLTSFETSVVPEEVRFVP+ME GRKALEEINQEMGLAFDEQDLQYYTRLFKE
Sbjct: 239 MTECAYTQKLTSFETSVVPEEVRFVPLMEKGRKALEEINQEMGLAFDEQDLQYYTRLFKE 298
Query: 300 DIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIG 359
DIKRNPTTVELFDIAQSNSEHSRHWFFTGK+VIDG+PM +TLMQIVKSTLQANPNNSVIG
Sbjct: 299 DIKRNPTTVELFDIAQSNSEHSRHWFFTGKMVIDGQPMNKTLMQIVKSTLQANPNNSVIG 358
Query: 360 FKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAG 419
FKDNSSAIKGF VKQLRPV PG C L + +D D+LFTAETHNFPCAVAPYPGAETGAG
Sbjct: 359 FKDNSSAIKGFTVKQLRPVHPGLTCPLDATIRDFDILFTAETHNFPCAVAPYPGAETGAG 418
Query: 420 GRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNG 479
GRIRDTHATGRGSFVVA+TAGYCVGNLN+EGSYAPWED SFTYPSNLAS LQILIDASNG
Sbjct: 419 GRIRDTHATGRGSFVVAATAGYCVGNLNIEGSYAPWEDHSFTYPSNLASSLQILIDASNG 478
Query: 480 ASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGML 539
ASDYGNKFGEPL+QGYTRTFGMRLPSG+RREWLKPIMFSGGIGQIDH HI+KGEPDIGML
Sbjct: 479 ASDYGNKFGEPLVQGYTRTFGMRLPSGERREWLKPIMFSGGIGQIDHTHITKGEPDIGML 538
Query: 540 VVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETN 599
VVKIGGPAYRIGMGGGAASSMVSGQNDA+LDFNAVQRGDAEMAQKLYRVVR CIEMGE N
Sbjct: 539 VVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRVVRTCIEMGENN 598
Query: 600 PIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKP 659
PIISIHDQGAGGNCNVVKEIIYPKGA IDIRAI+VGDHT+S+LEIWGAEYQEQDA+LVKP
Sbjct: 599 PIISIHDQGAGGNCNVVKEIIYPKGAVIDIRAIVVGDHTMSILEIWGAEYQEQDAILVKP 658
Query: 660 ESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVL 719
ESRDLLQSICERERVSMAV+G I+GEGRVVLVDSAA++KC SSGLP PPPAVDLELE+VL
Sbjct: 659 ESRDLLQSICERERVSMAVLGAINGEGRVVLVDSAAIEKCCSSGLPTPPPAVDLELEKVL 718
Query: 720 GDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVA 779
GDMP+KTFEF ++EPLDIAPGITVM++LKRVLRLPSVCSKRFLTTKVDRCVTGLVA
Sbjct: 719 GDMPRKTFEFQRVVNSKEPLDIAPGITVMEALKRVLRLPSVCSKRFLTTKVDRCVTGLVA 778
Query: 780 QQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVW 839
QQQTVGPLQ+TLADVAVIAQTYTDLTGGACA+GEQPIKGL+NPKAMARLAVGEALTNLVW
Sbjct: 779 QQQTVGPLQVTLADVAVIAQTYTDLTGGACAVGEQPIKGLINPKAMARLAVGEALTNLVW 838
Query: 840 AKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSG 899
AKVTSLS VKASGNWMYAAKLDGEGA MYDAATAL+EAMI+LG+AIDGGKDSLSMAA++
Sbjct: 839 AKVTSLSDVKASGNWMYAAKLDGEGADMYDAATALSEAMIDLGVAIDGGKDSLSMAAHAA 898
Query: 900 GEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQ 959
GEVVKAPG+LVISVYVTCPDITKTVTPDLKLGDDG+LLHIDLAKGKRRLG SALAQ F Q
Sbjct: 899 GEVVKAPGNLVISVYVTCPDITKTVTPDLKLGDDGVLLHIDLAKGKRRLGASALAQAFGQ 958
Query: 960 VGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDL 1019
VG++ PDLED+ YLKRVFE VQDLI DEL+S+GHDISDGGLLVC +EM+FAGN GI LDL
Sbjct: 959 VGDDCPDLEDISYLKRVFEGVQDLIEDELISSGHDISDGGLLVCAMEMAFAGNCGIVLDL 1018
Query: 1020 NSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGL 1079
S G SLF+TLFAEELGLVLEVS+ N+DTV +KL GVSA+IIGQV +S + + VDG
Sbjct: 1019 ASNGESLFRTLFAEELGLVLEVSRKNIDTVIEKLKRVGVSADIIGQVTASPLIHLTVDGE 1078
Query: 1080 THLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYM 1139
T+LNE+T LRDMWEETSF+LEK QRL SCV+SEKEGLK R EP WKLSF PS TD+KYM
Sbjct: 1079 TYLNEETYFLRDMWEETSFQLEKLQRLVSCVDSEKEGLKFRHEPFWKLSFVPSFTDDKYM 1138
Query: 1140 NATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGF 1199
ATSKPKVAVIREEGSNGDREM+AA YAAGFEPWD+TMSDL+NGAISL+EF G+VFVGGF
Sbjct: 1139 TATSKPKVAVIREEGSNGDREMAAALYAAGFEPWDITMSDLLNGAISLNEFCGVVFVGGF 1198
Query: 1200 SYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGG 1259
SYADVLDS KGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLM+LLGW+PGPQVGG
Sbjct: 1199 SYADVLDSGKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMSLLGWVPGPQVGG 1258
Query: 1260 VHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFP 1319
GAGGDPSQPRFVHNESGRFECRF+SV I+DSP+IMLKGMEGSTLGVWAAHGEGRAYFP
Sbjct: 1259 ALGAGGDPSQPRFVHNESGRFECRFTSVAIKDSPSIMLKGMEGSTLGVWAAHGEGRAYFP 1318
Query: 1320 DDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSP 1356
DDGVLDR++HS LAPVRYCDDDGNPTE YPFNVNGSP
Sbjct: 1319 DDGVLDRVVHSDLAPVRYCDDDGNPTETYPFNVNGSP 1355
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297842175|ref|XP_002888969.1| hypothetical protein ARALYDRAFT_476563 [Arabidopsis lyrata subsp. lyrata] gi|297334810|gb|EFH65228.1| hypothetical protein ARALYDRAFT_476563 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 2381 bits (6171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1131/1406 (80%), Positives = 1258/1406 (89%), Gaps = 7/1406 (0%)
Query: 9 AITEADFLQGTHRNTLFLNGNSAIKRKNLLWGALSNQNSKFGISNRKSVSLKCCAQ-SKP 67
A A FL G++R + L + LWG++ + S+ ++ K+VSL+C AQ +KP
Sbjct: 6 ATRAALFLNGSNRQAMLLQ-RCQRSSTSQLWGSVGMRTSRLSLNRTKAVSLRCSAQPNKP 64
Query: 68 RAVVSGDKTASVDEQPNLSEKPAQEVVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKT 127
+A VS S DE P+L EKPA EV+HFYR+PL+Q+SA AELLK+VQ KI NQIV L T
Sbjct: 65 KAAVSTGSFVSADELPSLVEKPAAEVIHFYRVPLIQESANAELLKAVQTKIGNQIVSLTT 124
Query: 128 EHCFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSF 187
E CFNIGL+S++ +KL VLKW+LQETYEPENLGT+SFLE+KKQ+GL AVIVEVGPRLSF
Sbjct: 125 EQCFNIGLESKLKDEKLSVLKWILQETYEPENLGTDSFLERKKQEGLHAVIVEVGPRLSF 184
Query: 188 TTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTE 247
TTAWS NAVSICR CGL EVTRLERSRRYLLFSK L +NQI +FAAMVHDRMTEC+Y++
Sbjct: 185 TTAWSTNAVSICRACGLNEVTRLERSRRYLLFSKEPLLENQIKEFAAMVHDRMTECLYSQ 244
Query: 248 KLTSFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTT 307
+L SFET+VVPEEV++VPVME GRKALEEINQEMGLAFDEQDLQYYTRLF+EDI+R+PT
Sbjct: 245 RLVSFETNVVPEEVKYVPVMEKGRKALEEINQEMGLAFDEQDLQYYTRLFREDIQRDPTN 304
Query: 308 VELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAI 367
VELFDIAQSNSEHSRHWFF G IVIDGKPM R+LMQIVKST +AN NNSVIGFKDNSSAI
Sbjct: 305 VELFDIAQSNSEHSRHWFFAGNIVIDGKPMDRSLMQIVKSTWEANRNNSVIGFKDNSSAI 364
Query: 368 KGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHA 427
+GF V QLRP+ PGS C L S++DLD+LFTAETHNFPCAVAPYPGAETGAGGRIRDTHA
Sbjct: 365 RGFLVNQLRPLLPGSVCLLDVSARDLDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHA 424
Query: 428 TGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKF 487
TGRGSFVVAST+GYCVGNLN+EGSYAPWED SF YPSNLASPLQILIDASNGASDYGNKF
Sbjct: 425 TGRGSFVVASTSGYCVGNLNMEGSYAPWEDSSFQYPSNLASPLQILIDASNGASDYGNKF 484
Query: 488 GEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPA 547
GEP+IQGYTRTFGMRLPSG RREWLKPIMFS GIGQIDH HI+KGEP++GMLVVKIGGPA
Sbjct: 485 GEPMIQGYTRTFGMRLPSGDRREWLKPIMFSAGIGQIDHTHITKGEPEVGMLVVKIGGPA 544
Query: 548 YRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQ 607
YRIGMGGGAASSMVSGQNDA+LDFNAVQRGDAEM+QKLYRVVRACIEMGE NPIISIHDQ
Sbjct: 545 YRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMSQKLYRVVRACIEMGEKNPIISIHDQ 604
Query: 608 GAGGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQS 667
GAGGNCNVVKEIIYP+GAEIDIRA++VGDHT+SVLEIWGAEYQEQDA+LVK ESR++LQS
Sbjct: 605 GAGGNCNVVKEIIYPQGAEIDIRAVVVGDHTMSVLEIWGAEYQEQDAILVKAESREILQS 664
Query: 668 ICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTF 727
IC+RER+SMA+IGTI+G GR L+DS A KC GLPPPPPAVDLELE+VLGDMP+KTF
Sbjct: 665 ICKRERLSMAMIGTINGGGRCTLIDSTAAAKCNKEGLPPPPPAVDLELEKVLGDMPKKTF 724
Query: 728 EFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPL 787
EF+ AREPLDIAPGIT+MDSLKRVLRLPSV SKRFLTTKVDRCVTGLVAQQQTVGPL
Sbjct: 725 EFNRIAYAREPLDIAPGITLMDSLKRVLRLPSVSSKRFLTTKVDRCVTGLVAQQQTVGPL 784
Query: 788 QITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSH 847
QITLADVAVIAQT+TDLTGGACAIGEQPIKGLL+PKAMARLAVGEALTNLVWAKVT+LS
Sbjct: 785 QITLADVAVIAQTFTDLTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTALSD 844
Query: 848 VKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPG 907
VKASGNWMYAAKL+GEG+AMYD A AL+EAMIELGIAIDGGKDSLSMAA++ GEVVKAPG
Sbjct: 845 VKASGNWMYAAKLEGEGSAMYDTAIALSEAMIELGIAIDGGKDSLSMAAHADGEVVKAPG 904
Query: 908 SLVISVYVTCPDITKTVTPDLKL-GDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPD 966
+LVIS YVTCPDITKTVTPDLKL GDDGILLH+DLAKG RRLGGSALAQVF Q+GN+ PD
Sbjct: 905 NLVISAYVTCPDITKTVTPDLKLGGDDGILLHVDLAKGNRRLGGSALAQVFGQIGNDCPD 964
Query: 967 LEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSL 1026
L+DVPYLK VFE +Q LI + LVS GHDISDGGL+V LEM+FAGN GI LDL S G SL
Sbjct: 965 LDDVPYLKNVFEGIQALIAENLVSAGHDISDGGLVVTALEMAFAGNKGINLDLASNGISL 1024
Query: 1027 FQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKT 1086
F+TLF+EELGL++EVSK+NLD V +KL D V+AEIIG V S +E+KVDG+THL+EKT
Sbjct: 1025 FETLFSEELGLIMEVSKTNLDAVMEKLRDFNVTAEIIGNVTDSPMIEVKVDGITHLSEKT 1084
Query: 1087 SLLRDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPK 1146
S LRDMWE+TSF+LEK QRLASCVE EKEGLK R EP WKLSFTPS T+ KYM+ KPK
Sbjct: 1085 SFLRDMWEDTSFQLEKLQRLASCVEMEKEGLKFRHEPNWKLSFTPSSTNNKYMSQDVKPK 1144
Query: 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLD 1206
VAVIREEGSNGDREMSAAFYAAGFEPWDVT+SDL+ G I+LD+FRGIVFVGGFSYADVLD
Sbjct: 1145 VAVIREEGSNGDREMSAAFYAAGFEPWDVTVSDLLAGDITLDQFRGIVFVGGFSYADVLD 1204
Query: 1207 SAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGD 1266
SAKGW+ASIRFN+P+L+QFQEFYKRPDTFSLG+CNGCQLMALLGW+PGPQVGG D
Sbjct: 1205 SAKGWAASIRFNEPVLSQFQEFYKRPDTFSLGICNGCQLMALLGWVPGPQVGGSL----D 1260
Query: 1267 PSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDR 1326
SQPRFVHNESGRFECRF+SVTI+DSP+IMLKGMEGSTLGVWAAHGEGRAYFPD+GVLD
Sbjct: 1261 TSQPRFVHNESGRFECRFTSVTIKDSPSIMLKGMEGSTLGVWAAHGEGRAYFPDEGVLDH 1320
Query: 1327 ILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYP 1386
+LHS LAP+RYCDDDGN TE YPFN+NGSPLG+AAICSPDGRHLAMMPHPERC+LMWQ+P
Sbjct: 1321 MLHSDLAPLRYCDDDGNVTEAYPFNLNGSPLGIAAICSPDGRHLAMMPHPERCYLMWQFP 1380
Query: 1387 WYPKNWNVDKKGPSPWLKMFQNAREW 1412
WYP +W+V+K GPSPWLKMFQNAR+W
Sbjct: 1381 WYPTSWDVEKAGPSPWLKMFQNARDW 1406
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|186495325|ref|NP_177566.3| phosphoribosylformylglycinamidine synthase [Arabidopsis thaliana] gi|391358183|sp|Q9M8D3.3|PUR4_ARATH RecName: Full=Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial; Short=FGAM synthase; Short=FGAMS; AltName: Full=Formylglycinamide ribotide amidotransferase; Short=FGARAT; AltName: Full=Formylglycinamide ribotide synthetase; Flags: Precursor gi|332197450|gb|AEE35571.1| phosphoribosylformylglycinamidine synthase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 2379 bits (6166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1133/1406 (80%), Positives = 1259/1406 (89%), Gaps = 10/1406 (0%)
Query: 9 AITEADFLQGTHRNTLFLNGNSAIKRKNLLWGALSNQNSKFGISNRKSVSLKCCAQ-SKP 67
A A FL G++R + L +S + LWG++ + S+ ++ K+VSL+C AQ +KP
Sbjct: 6 ATRAALFLNGSNRQAMLLQRSSMSQ----LWGSVRMRTSRLSLNRTKAVSLRCSAQPNKP 61
Query: 68 RAVVSGDKTASVDEQPNLSEKPAQEVVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKT 127
+A VS + DE P+L EKPA EV+HFYR+PL+Q+SA AELLK+VQ KISNQIV L T
Sbjct: 62 KAAVSTGSFVTADELPSLVEKPAAEVIHFYRVPLIQESANAELLKAVQTKISNQIVSLTT 121
Query: 128 EHCFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSF 187
E FNIGL+S++ +KL VLKW+LQETYEPENLGT+SFLE+KKQ+GL AVIVEVGPRLSF
Sbjct: 122 EQSFNIGLESKLKDEKLSVLKWILQETYEPENLGTDSFLERKKQEGLHAVIVEVGPRLSF 181
Query: 188 TTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTE 247
TTAWS NAVSICR CGL EVTRLERSRRYLLFSK L +NQI +FAAMVHDRMTECVYT+
Sbjct: 182 TTAWSTNAVSICRACGLDEVTRLERSRRYLLFSKEPLLENQIKEFAAMVHDRMTECVYTQ 241
Query: 248 KLTSFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTT 307
KL SFET+VVPEEV++VPVME GRKALEEINQEMGLAFDEQDLQYYTRLF+EDIKR+PT
Sbjct: 242 KLVSFETNVVPEEVKYVPVMEKGRKALEEINQEMGLAFDEQDLQYYTRLFREDIKRDPTN 301
Query: 308 VELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAI 367
VELFDIAQSNSEHSRHWFF G +VIDGKPM ++LMQIVKST +AN NNSVIGFKDNSSAI
Sbjct: 302 VELFDIAQSNSEHSRHWFFAGNMVIDGKPMDKSLMQIVKSTWEANRNNSVIGFKDNSSAI 361
Query: 368 KGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHA 427
+GF V QLRP+ PGS C L S++DLD+LFTAETHNFPCAVAPYPGAETGAGGRIRDTHA
Sbjct: 362 RGFLVNQLRPLLPGSVCLLDVSARDLDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHA 421
Query: 428 TGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKF 487
TGRGSFVVAST+GYCVGNLN+EGSYAPWED SF YPSNLASPLQILIDASNGASDYGNKF
Sbjct: 422 TGRGSFVVASTSGYCVGNLNMEGSYAPWEDSSFQYPSNLASPLQILIDASNGASDYGNKF 481
Query: 488 GEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPA 547
GEP+IQGYTRTFGMRLPSG RREWLKPIMFS GIGQIDH HI+KGEP++GMLVVKIGGPA
Sbjct: 482 GEPMIQGYTRTFGMRLPSGDRREWLKPIMFSAGIGQIDHTHITKGEPEVGMLVVKIGGPA 541
Query: 548 YRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQ 607
YRIGMGGGAASSMVSGQNDA+LDFNAVQRGDAEM+QKLYRVVRACIEMGE NPIISIHDQ
Sbjct: 542 YRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMSQKLYRVVRACIEMGEKNPIISIHDQ 601
Query: 608 GAGGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQS 667
GAGGNCNVVKEIIYP+GAEIDIRA++VGDHT+SVLEIWGAEYQEQDA+LVK ESR++LQS
Sbjct: 602 GAGGNCNVVKEIIYPQGAEIDIRAVVVGDHTMSVLEIWGAEYQEQDAILVKAESREILQS 661
Query: 668 ICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTF 727
IC+RER+SMAVIGTI+G GR L+DS A KC GLPPPPPAVDLELE+VLGDMP+KTF
Sbjct: 662 ICKRERLSMAVIGTINGGGRCTLIDSTAAAKCSKEGLPPPPPAVDLELEKVLGDMPKKTF 721
Query: 728 EFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPL 787
+F+ AREPLDIAPGIT+MD+LKRVLRLPSV SKRFLTTKVDRCVTGLVAQQQTVGPL
Sbjct: 722 KFNRIAYAREPLDIAPGITLMDALKRVLRLPSVSSKRFLTTKVDRCVTGLVAQQQTVGPL 781
Query: 788 QITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSH 847
QITLADVAVIAQT+TDLTGGACAIGEQPIKGLL+PKAMARLAVGEALTNLVWAKVT+LS
Sbjct: 782 QITLADVAVIAQTFTDLTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTALSD 841
Query: 848 VKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPG 907
VKASGNWMYAAKL+GEG+AMYDAA AL+EAMIELGIAIDGGKDSLSMAA++ GEVVKAPG
Sbjct: 842 VKASGNWMYAAKLEGEGSAMYDAAIALSEAMIELGIAIDGGKDSLSMAAHADGEVVKAPG 901
Query: 908 SLVISVYVTCPDITKTVTPDLKL-GDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPD 966
+LVIS YVTCPDITKTVTPDLKL GDDGILLH+DLAKGKRRLGGSALAQVF Q+GN+ PD
Sbjct: 902 NLVISAYVTCPDITKTVTPDLKLGGDDGILLHVDLAKGKRRLGGSALAQVFGQIGNDCPD 961
Query: 967 LEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSL 1026
L+DVPYLK VF+ VQ LI + LVS GHDISDGGL+V LEM+FAGN GI LDL S G SL
Sbjct: 962 LDDVPYLKNVFDGVQALIAENLVSAGHDISDGGLVVTALEMAFAGNKGINLDLASNGISL 1021
Query: 1027 FQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKT 1086
F+TLF+EELGLVLE+SK+NLD V +KL V+AEIIG V S +E+KVDG+THL+EKT
Sbjct: 1022 FETLFSEELGLVLEISKTNLDAVMEKLRAFDVTAEIIGNVTDSPLIEVKVDGITHLSEKT 1081
Query: 1087 SLLRDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPK 1146
S LRDMWE+TSF+LEK QRLASCVE EKEGLK R EP WKLSF PS T+ YM+ KPK
Sbjct: 1082 SFLRDMWEDTSFQLEKLQRLASCVEMEKEGLKFRHEPNWKLSFIPSSTNNNYMSQDVKPK 1141
Query: 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLD 1206
VAVIREEGSNGDREMSAAFYAAGFEPWDVT+SDL+ G I+LD+FRGIVFVGGFSYADVLD
Sbjct: 1142 VAVIREEGSNGDREMSAAFYAAGFEPWDVTVSDLLAGDITLDQFRGIVFVGGFSYADVLD 1201
Query: 1207 SAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGD 1266
SAKGW+ASIRFN+P+L+QFQEFYKRPDTFSLG+CNGCQLMALLGW+PGPQVGG D
Sbjct: 1202 SAKGWAASIRFNEPVLSQFQEFYKRPDTFSLGICNGCQLMALLGWVPGPQVGGSL----D 1257
Query: 1267 PSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDR 1326
SQPRFVHNESGRFECRF+SVTI+DSP+IMLKGMEGSTLGVWAAHGEGRAYFPD+GVLD
Sbjct: 1258 TSQPRFVHNESGRFECRFTSVTIKDSPSIMLKGMEGSTLGVWAAHGEGRAYFPDEGVLDH 1317
Query: 1327 ILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYP 1386
+LHS LAP+RYCDDDGN TE YPFN+NGSPLG+AAICSPDGRHLAMMPHPERCFLMWQ+P
Sbjct: 1318 MLHSDLAPLRYCDDDGNVTEAYPFNLNGSPLGIAAICSPDGRHLAMMPHPERCFLMWQFP 1377
Query: 1387 WYPKNWNVDKKGPSPWLKMFQNAREW 1412
WYP +W+V+K GPSPWLKMFQNAR+W
Sbjct: 1378 WYPTSWDVEKAGPSPWLKMFQNARDW 1403
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|159032992|gb|ABW87767.1| phosphoribosylformylglycinamidine synthase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 2370 bits (6141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1125/1377 (81%), Positives = 1246/1377 (90%), Gaps = 6/1377 (0%)
Query: 38 LWGALSNQNSKFGISNRKSVSLKCCAQ-SKPRAVVSGDKTASVDEQPNLSEKPAQEVVHF 96
LWG++ + S+ ++ K+VSL+C AQ +KP+A VS + DE P+L EKPA EV+HF
Sbjct: 11 LWGSVRMRTSRLSLNRTKAVSLRCSAQPNKPKAAVSTGSFVTADELPSLVEKPAAEVIHF 70
Query: 97 YRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYE 156
YR+PL+Q+SA AELLK+VQ KISNQIV L TE FNIGL+S++ +KL VLKW+LQETYE
Sbjct: 71 YRVPLIQESANAELLKAVQTKISNQIVSLTTEQSFNIGLESKLKDEKLSVLKWILQETYE 130
Query: 157 PENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRY 216
PENLGT+SFLE+KKQ+GL AVIVEVGPRLSFTTAWS NAVSICR CGL EVTRLERSRRY
Sbjct: 131 PENLGTDSFLERKKQEGLHAVIVEVGPRLSFTTAWSTNAVSICRACGLDEVTRLERSRRY 190
Query: 217 LLFSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRFVPVMENGRKALEE 276
LLFSK L +NQI +FAAMVHDRMTECVYT+KL SFET+VVPEEV++VPVME GRKALEE
Sbjct: 191 LLFSKEPLLENQIKEFAAMVHDRMTECVYTQKLVSFETNVVPEEVKYVPVMEKGRKALEE 250
Query: 277 INQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKP 336
INQEMGLAFDEQDLQYYTRLF+EDIKR+PT VELFDIAQSNSEHSRHWFF G +VIDGKP
Sbjct: 251 INQEMGLAFDEQDLQYYTRLFREDIKRDPTNVELFDIAQSNSEHSRHWFFAGNMVIDGKP 310
Query: 337 MVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVL 396
M ++LMQIVKST +AN NNSVIGFKDNSSAI+GF V QLRP+ PGS C L S++DLD+L
Sbjct: 311 MDKSLMQIVKSTWEANRNNSVIGFKDNSSAIRGFLVNQLRPLLPGSVCLLDVSARDLDIL 370
Query: 397 FTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWE 456
FTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVAST+GYCVGNLN+EGSYAPWE
Sbjct: 371 FTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTSGYCVGNLNMEGSYAPWE 430
Query: 457 DPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIM 516
D SF YPSNLASPLQILIDASNGASDYGNKFGEP+IQGYTRTFGMRLPSG RREWLKPIM
Sbjct: 431 DSSFQYPSNLASPLQILIDASNGASDYGNKFGEPMIQGYTRTFGMRLPSGDRREWLKPIM 490
Query: 517 FSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQR 576
FS GIGQIDH HI+KGEP++GMLVVKIGGPAYRIGMGGGAASSMVSGQNDA+LDFNAVQR
Sbjct: 491 FSAGIGQIDHTHITKGEPEVGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQR 550
Query: 577 GDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGD 636
GDAEM+QKLYRVVRACIEMGE NPIISIHDQGAGGNCNVVKEIIYP+GAEIDIRA++VGD
Sbjct: 551 GDAEMSQKLYRVVRACIEMGEKNPIISIHDQGAGGNCNVVKEIIYPQGAEIDIRAVVVGD 610
Query: 637 HTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAV 696
HT+SVLEIWGAEYQEQDA+LVK ESR++LQSIC+RER+SMAVIGTI+G GR L+DS A
Sbjct: 611 HTMSVLEIWGAEYQEQDAILVKAESREILQSICKRERLSMAVIGTINGGGRCTLIDSTAA 670
Query: 697 QKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLR 756
KC GLPPPPPAVDLELE+VLGDMP+KTF+F+ AREPLDIAPGIT+MD+LKRVLR
Sbjct: 671 AKCSKEGLPPPPPAVDLELEKVLGDMPKKTFKFNRIAYAREPLDIAPGITLMDALKRVLR 730
Query: 757 LPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPI 816
LPSV SKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQT+TDLTGGACAIGEQPI
Sbjct: 731 LPSVSSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTFTDLTGGACAIGEQPI 790
Query: 817 KGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAE 876
KGLL+PKAMARLAVGEALTNLVWAKVT+LS VKASGNWMYAAKL+GEG+AMYDAA AL+E
Sbjct: 791 KGLLDPKAMARLAVGEALTNLVWAKVTALSDVKASGNWMYAAKLEGEGSAMYDAAIALSE 850
Query: 877 AMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKL-GDDGI 935
AMIELGIAIDGGKDSLSMAA++ GEVVKAPG+LVIS YVTCPDITKTVTPDLKL GDDGI
Sbjct: 851 AMIELGIAIDGGKDSLSMAAHADGEVVKAPGNLVISAYVTCPDITKTVTPDLKLGGDDGI 910
Query: 936 LLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDI 995
LLH+DLAKGKRRLGGSALAQVF Q+GN+ PDL+DVPYLK VF+ VQ LI + LVS GHDI
Sbjct: 911 LLHVDLAKGKRRLGGSALAQVFGQIGNDCPDLDDVPYLKNVFDGVQALIAENLVSAGHDI 970
Query: 996 SDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHD 1055
SDGGL+V LEM+FAGN GI LDL S G SLF+TLF+EELGLVLE+SK+NLD V +KL
Sbjct: 971 SDGGLVVTALEMAFAGNKGINLDLASNGISLFETLFSEELGLVLEISKTNLDAVMEKLRA 1030
Query: 1056 AGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKE 1115
V+AEIIG V S +E+KVDG+THL+EKTS LRDMWE+TSF+LEK QRLASCVE EKE
Sbjct: 1031 FDVTAEIIGNVTDSPLIEVKVDGITHLSEKTSFLRDMWEDTSFQLEKLQRLASCVEMEKE 1090
Query: 1116 GLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDV 1175
GLK R EP WKLSF PS T+ YM+ KPKVAVIREEGSNGDREMSAAFYAAGFEPWDV
Sbjct: 1091 GLKFRHEPNWKLSFIPSSTNNNYMSQDVKPKVAVIREEGSNGDREMSAAFYAAGFEPWDV 1150
Query: 1176 TMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTF 1235
T+SDL+ G I+LD+FRGIVFVGGFSYADVLDSAKGW+ASIRFN+P+L+QFQEFYKRPDTF
Sbjct: 1151 TVSDLLAGDITLDQFRGIVFVGGFSYADVLDSAKGWAASIRFNEPVLSQFQEFYKRPDTF 1210
Query: 1236 SLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAI 1295
SLG+CNGCQLMALLGW+PGPQVGG D SQPRFVHNESGRFECRF+SVTI+DSP+I
Sbjct: 1211 SLGICNGCQLMALLGWVPGPQVGGSL----DTSQPRFVHNESGRFECRFTSVTIKDSPSI 1266
Query: 1296 MLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGS 1355
MLKGMEGSTLGVWAAHGEGRAYFPD+GVLD +LHS LAP+RYCDDDGN TE YPFN+NGS
Sbjct: 1267 MLKGMEGSTLGVWAAHGEGRAYFPDEGVLDHMLHSDLAPLRYCDDDGNVTEAYPFNLNGS 1326
Query: 1356 PLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 1412
PLG+AAICSPDGRHLAMMPHPERCFLMWQ+PWYP +W+V+K GPSPWLKMFQNAR+W
Sbjct: 1327 PLGIAAICSPDGRHLAMMPHPERCFLMWQFPWYPTSWDVEKAGPSPWLKMFQNARDW 1383
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|12324901|gb|AAG52403.1|AC020579_5 putative phosphoribosylformylglycinamidine synthase; 25509-29950 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 2365 bits (6128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1124/1377 (81%), Positives = 1245/1377 (90%), Gaps = 6/1377 (0%)
Query: 38 LWGALSNQNSKFGISNRKSVSLKCCAQ-SKPRAVVSGDKTASVDEQPNLSEKPAQEVVHF 96
LWG++ + S+ ++ K+VSL+C AQ +KP+A VS + DE P+L EKPA EV+HF
Sbjct: 11 LWGSVRMRTSRLSLNRTKAVSLRCSAQPNKPKAAVSTGSFVTADELPSLVEKPAAEVIHF 70
Query: 97 YRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYE 156
YR+PL+Q+SA AELLK+VQ KISNQIV L TE FNIGL+S++ +KL VLKW+LQETYE
Sbjct: 71 YRVPLIQESANAELLKAVQTKISNQIVSLTTEQSFNIGLESKLKDEKLSVLKWILQETYE 130
Query: 157 PENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRY 216
PENLGT+SFLE+KKQ+GL AVIVEVGPRLSFTTAWS NAVSICR CGL EVTRLERSRRY
Sbjct: 131 PENLGTDSFLERKKQEGLHAVIVEVGPRLSFTTAWSTNAVSICRACGLDEVTRLERSRRY 190
Query: 217 LLFSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRFVPVMENGRKALEE 276
LLFSK L +NQI +FAAMVHDRMTECVYT+KL SFET+VVPEEV++VPVME GRKALEE
Sbjct: 191 LLFSKEPLLENQIKEFAAMVHDRMTECVYTQKLVSFETNVVPEEVKYVPVMEKGRKALEE 250
Query: 277 INQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKP 336
INQEMGLAFDEQDLQYYTRLF+EDIKR+PT VELFDIAQSNSEHSRHWFF G +VIDGKP
Sbjct: 251 INQEMGLAFDEQDLQYYTRLFREDIKRDPTNVELFDIAQSNSEHSRHWFFAGNMVIDGKP 310
Query: 337 MVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVL 396
M ++LMQIVKST +AN NNSVIGFKDNSSAI+GF V QLRP+ PGS C L S++DLD+L
Sbjct: 311 MDKSLMQIVKSTWEANRNNSVIGFKDNSSAIRGFLVNQLRPLLPGSVCLLDVSARDLDIL 370
Query: 397 FTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWE 456
FTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVAST+GYCVGNLN+EGSYAPWE
Sbjct: 371 FTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTSGYCVGNLNMEGSYAPWE 430
Query: 457 DPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIM 516
D SF YPSNLASPLQILIDASNGASDYGNKFGEP+IQGYTRTFGMRLPSG RREWLKPIM
Sbjct: 431 DSSFQYPSNLASPLQILIDASNGASDYGNKFGEPMIQGYTRTFGMRLPSGDRREWLKPIM 490
Query: 517 FSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQR 576
FS GIGQIDH HI+KGEP++GMLVVKIGGPAYRIGMGGGAASSMVSGQNDA+LDFNAVQR
Sbjct: 491 FSAGIGQIDHTHITKGEPEVGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQR 550
Query: 577 GDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGD 636
GDAEM+QKLYRVVRACIEMGE NPIISIHDQGAGGNCNVVKEIIYP+GAEIDIRA++VGD
Sbjct: 551 GDAEMSQKLYRVVRACIEMGEKNPIISIHDQGAGGNCNVVKEIIYPQGAEIDIRAVVVGD 610
Query: 637 HTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAV 696
HT+SVLEIWGAEYQEQDA+LVK ESR++LQSIC+RER+SMAVIGTI+G GR L+DS A
Sbjct: 611 HTMSVLEIWGAEYQEQDAILVKAESREILQSICKRERLSMAVIGTINGGGRCTLIDSTAA 670
Query: 697 QKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLR 756
KC GLPPPPPAVDLELE+VLGDMP+KTF+F+ AREPLDIAPGIT+MD+LKRVLR
Sbjct: 671 AKCSKEGLPPPPPAVDLELEKVLGDMPKKTFKFNRIAYAREPLDIAPGITLMDALKRVLR 730
Query: 757 LPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPI 816
LPSV SKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQT+TDLTGGACAIGEQPI
Sbjct: 731 LPSVSSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTFTDLTGGACAIGEQPI 790
Query: 817 KGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAE 876
KGLL+PKAMARLAVGEALTNLVWAKVT+LS VKASGNWMYAAKL+GEG+AMYDAA AL+E
Sbjct: 791 KGLLDPKAMARLAVGEALTNLVWAKVTALSDVKASGNWMYAAKLEGEGSAMYDAAIALSE 850
Query: 877 AMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKL-GDDGI 935
AMIELGIAIDGGKDSLSMAA++ GEVVKAPG+LVIS YVTCPDITKTVTPDLKL GDDGI
Sbjct: 851 AMIELGIAIDGGKDSLSMAAHADGEVVKAPGNLVISAYVTCPDITKTVTPDLKLGGDDGI 910
Query: 936 LLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDI 995
LLH+DLAKGKRRLGGSALAQVF Q+GN+ PDL+DVPYLK VF+ VQ LI + LVS GHDI
Sbjct: 911 LLHVDLAKGKRRLGGSALAQVFGQIGNDCPDLDDVPYLKNVFDGVQALIAENLVSAGHDI 970
Query: 996 SDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHD 1055
SDGGL+V LEM+FAGN GI LDL S G SLF+TLF+EELGLVLE+SK+NLD V +KL
Sbjct: 971 SDGGLVVTALEMAFAGNKGINLDLASNGISLFETLFSEELGLVLEISKTNLDAVMEKLRA 1030
Query: 1056 AGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKE 1115
V+AEIIG V S +E+KVDG+THL+EKTS LRDMWE+TSF+LEK QRLASCVE EKE
Sbjct: 1031 FDVTAEIIGNVTDSPLIEVKVDGITHLSEKTSFLRDMWEDTSFQLEKLQRLASCVEMEKE 1090
Query: 1116 GLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDV 1175
GLK R EP WKLSF PS T+ YM+ PKVAVIREEGSNGDREMSAAFYAAGFEPWDV
Sbjct: 1091 GLKFRHEPNWKLSFIPSSTNNNYMSQGMIPKVAVIREEGSNGDREMSAAFYAAGFEPWDV 1150
Query: 1176 TMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTF 1235
T+SDL+ G I+LD+FRGIVFVGGFSYADVLDSAKGW+ASIRFN+P+L+QFQEFYKRPDTF
Sbjct: 1151 TVSDLLAGDITLDQFRGIVFVGGFSYADVLDSAKGWAASIRFNEPVLSQFQEFYKRPDTF 1210
Query: 1236 SLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAI 1295
SLG+CNGCQLMALLGW+PGPQVGG D SQPRFVHNESGRFECRF+SVTI+DSP+I
Sbjct: 1211 SLGICNGCQLMALLGWVPGPQVGGSL----DTSQPRFVHNESGRFECRFTSVTIKDSPSI 1266
Query: 1296 MLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGS 1355
MLKGMEGSTLGVWAAHGEGRAYFPD+GVLD +LHS LAP+RYCDDDGN TE YPFN+NGS
Sbjct: 1267 MLKGMEGSTLGVWAAHGEGRAYFPDEGVLDHMLHSDLAPLRYCDDDGNVTEAYPFNLNGS 1326
Query: 1356 PLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 1412
PLG+AAICSPDGRHLAMMPHPERCFLMWQ+PWYP +W+V+K GPSPWLKMFQNAR+W
Sbjct: 1327 PLGIAAICSPDGRHLAMMPHPERCFLMWQFPWYPTSWDVEKAGPSPWLKMFQNARDW 1383
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1414 | ||||||
| TAIR|locus:2019637 | 1407 | PUR4 "purine biosynthesis 4" [ | 0.983 | 0.988 | 0.783 | 0.0 | |
| ZFIN|ZDB-GENE-030131-4420 | 1314 | pfas "phosphoribosylformylglyc | 0.917 | 0.987 | 0.527 | 0.0 | |
| UNIPROTKB|F1N4K1 | 1338 | PFAS "Uncharacterized protein" | 0.925 | 0.977 | 0.513 | 0.0 | |
| UNIPROTKB|I3L712 | 1338 | PFAS "Uncharacterized protein" | 0.924 | 0.976 | 0.507 | 0.0 | |
| UNIPROTKB|O15067 | 1338 | PFAS "Phosphoribosylformylglyc | 0.924 | 0.976 | 0.511 | 0.0 | |
| MGI|MGI:2684864 | 1337 | Pfas "phosphoribosylformylglyc | 0.925 | 0.978 | 0.504 | 0.0 | |
| UNIPROTKB|E2QYQ9 | 1341 | PFAS "Uncharacterized protein" | 0.923 | 0.973 | 0.500 | 0.0 | |
| DICTYBASE|DDB_G0288145 | 1355 | purL "PFAS" [Dictyostelium dis | 0.682 | 0.712 | 0.515 | 0.0 | |
| RGD|1304926 | 1271 | Pfas "phosphoribosylformylglyc | 0.764 | 0.850 | 0.522 | 5.6e-290 | |
| UNIPROTKB|F5GWT9 | 914 | PFAS "Phosphoribosylformylglyc | 0.631 | 0.977 | 0.527 | 2.9e-238 |
| TAIR|locus:2019637 PUR4 "purine biosynthesis 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 5758 (2032.0 bits), Expect = 0., P = 0.
Identities = 1100/1404 (78%), Positives = 1226/1404 (87%)
Query: 17 QGTHRNTLFLNGNSA----IKRKNL--LWGALSNQNSKFGISNRKSVSLKCCAQ-SKPRA 69
Q T R LFLNG++ ++R ++ LWG++ + S+ ++ K+VSL+C AQ +KP+A
Sbjct: 5 QAT-RAALFLNGSNRQAMLLQRSSMSQLWGSVRMRTSRLSLNRTKAVSLRCSAQPNKPKA 63
Query: 70 VVSGDKTASVDEQPNLSEKPAQEVVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEH 129
VS + DE P+L EKPA EV+HFYR+PL+Q+SA AELLK+VQ KISNQIV L TE
Sbjct: 64 AVSTGSFVTADELPSLVEKPAAEVIHFYRVPLIQESANAELLKAVQTKISNQIVSLTTEQ 123
Query: 130 CFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTT 189
FNIGL+S++ +KL VLKW+LQETYEPENLGT+SFLE+KKQ+GL AVIVEVGPRLSFTT
Sbjct: 124 SFNIGLESKLKDEKLSVLKWILQETYEPENLGTDSFLERKKQEGLHAVIVEVGPRLSFTT 183
Query: 190 AWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKL 249
AWS NAVSICR CGL EVTRLERSRRYLLFSK L +NQI +FAAMVHDRMTECVYT+KL
Sbjct: 184 AWSTNAVSICRACGLDEVTRLERSRRYLLFSKEPLLENQIKEFAAMVHDRMTECVYTQKL 243
Query: 250 TSFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVE 309
SFET+VVPEEV++VPVME GRKALEEINQEMGLAFDEQDLQYYTRLF+EDIKR+PT VE
Sbjct: 244 VSFETNVVPEEVKYVPVMEKGRKALEEINQEMGLAFDEQDLQYYTRLFREDIKRDPTNVE 303
Query: 310 LFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKG 369
LFDIAQSNSEHSRHWFF G +VIDGKPM ++LMQIVKST +AN NNSVIGFKDNSSAI+G
Sbjct: 304 LFDIAQSNSEHSRHWFFAGNMVIDGKPMDKSLMQIVKSTWEANRNNSVIGFKDNSSAIRG 363
Query: 370 FPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATG 429
F V QLRP+ PGS C L S++DLD+LFTAETHNFPCAVAPYPGAETGAGGRIRDTHATG
Sbjct: 364 FLVNQLRPLLPGSVCLLDVSARDLDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATG 423
Query: 430 RGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGE 489
RGSFVVAST+GYCVGNLN+EGSYAPWED SF YPSNLASPLQILIDASNGASDYGNKFGE
Sbjct: 424 RGSFVVASTSGYCVGNLNMEGSYAPWEDSSFQYPSNLASPLQILIDASNGASDYGNKFGE 483
Query: 490 PLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYR 549
P+IQGYTRTFGMRLPSG RREWLKPIMFS GIGQIDH HI+KGEP++GMLVVKIGGPAYR
Sbjct: 484 PMIQGYTRTFGMRLPSGDRREWLKPIMFSAGIGQIDHTHITKGEPEVGMLVVKIGGPAYR 543
Query: 550 IXXXXXXXXXXXXXQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGA 609
I QNDA+LDFNAVQRGDAEM+QKLYRVVRACIEMGE NPIISIHDQGA
Sbjct: 544 IGMGGGAASSMVSGQNDAELDFNAVQRGDAEMSQKLYRVVRACIEMGEKNPIISIHDQGA 603
Query: 610 GGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSIC 669
GGNCNVVKEIIYP+GAEIDIRA++VGDHT+SVLEIWGAEYQEQDA+LVK ESR++LQSIC
Sbjct: 604 GGNCNVVKEIIYPQGAEIDIRAVVVGDHTMSVLEIWGAEYQEQDAILVKAESREILQSIC 663
Query: 670 ERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEF 729
+RER+SMAVIGTI+G GR L+DS A KC GLPPPPPAVDLELE+VLGDMP+KTF+F
Sbjct: 664 KRERLSMAVIGTINGGGRCTLIDSTAAAKCSKEGLPPPPPAVDLELEKVLGDMPKKTFKF 723
Query: 730 HHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQI 789
+ AREPLDIAPGIT+MD+LKRVLRLPSV SKRFLTTKVDRCVTGLVAQQQTVGPLQI
Sbjct: 724 NRIAYAREPLDIAPGITLMDALKRVLRLPSVSSKRFLTTKVDRCVTGLVAQQQTVGPLQI 783
Query: 790 TLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVK 849
TLADVAVIAQT+TDLTGGACAIGEQPIKGLL+PKAMARLAVGEALTNLVWAKVT+LS VK
Sbjct: 784 TLADVAVIAQTFTDLTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTALSDVK 843
Query: 850 ASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSL 909
ASGNWMYAAKL+GEG+AMYDAA AL+EAMIELGIAIDGGKDSLSMAA++ GEVVKAPG+L
Sbjct: 844 ASGNWMYAAKLEGEGSAMYDAAIALSEAMIELGIAIDGGKDSLSMAAHADGEVVKAPGNL 903
Query: 910 VISVYVTCPDITKTVTPXXXXXXXXXXXXXXX-AKGKRRLGGSALAQVFDQVGNESPDLE 968
VIS YVTCPDITKTVTP AKGKRRLGGSALAQVF Q+GN+ PDL+
Sbjct: 904 VISAYVTCPDITKTVTPDLKLGGDDGILLHVDLAKGKRRLGGSALAQVFGQIGNDCPDLD 963
Query: 969 DVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQ 1028
DVPYLK VF+ VQ LI + LVS GHDISDGGL+V LEM+FAGN GI LDL S G SLF+
Sbjct: 964 DVPYLKNVFDGVQALIAENLVSAGHDISDGGLVVTALEMAFAGNKGINLDLASNGISLFE 1023
Query: 1029 TLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSL 1088
TLF+EELGLVLE+SK+NLD V +KL V+AEIIG V S +E+KVDG+THL+EKTS
Sbjct: 1024 TLFSEELGLVLEISKTNLDAVMEKLRAFDVTAEIIGNVTDSPLIEVKVDGITHLSEKTSF 1083
Query: 1089 LRDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVA 1148
LRDMWE+TSF+LEK QRLASCVE EKEGLK R EP WKLSF PS T+ YM+ KPKVA
Sbjct: 1084 LRDMWEDTSFQLEKLQRLASCVEMEKEGLKFRHEPNWKLSFIPSSTNNNYMSQDVKPKVA 1143
Query: 1149 VIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSA 1208
VIREEGSNGDREMSAAFYAAGFEPWDVT+SDL+ G I+LD+FRGIVFVGGFSYADVLDSA
Sbjct: 1144 VIREEGSNGDREMSAAFYAAGFEPWDVTVSDLLAGDITLDQFRGIVFVGGFSYADVLDSA 1203
Query: 1209 KGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIXXXXXXXXXXXXXDPS 1268
KGW+ASIRFN+P+L+QFQEFYKRPDTFSLG+CNGCQLMALLGW+ D S
Sbjct: 1204 KGWAASIRFNEPVLSQFQEFYKRPDTFSLGICNGCQLMALLGWVPGPQVGGSL----DTS 1259
Query: 1269 QPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRIL 1328
QPRFVHNESGRFECRF+SVTI+DSP+IMLKGMEGSTLGVWAAHGEGRAYFPD+GVLD +L
Sbjct: 1260 QPRFVHNESGRFECRFTSVTIKDSPSIMLKGMEGSTLGVWAAHGEGRAYFPDEGVLDHML 1319
Query: 1329 HSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWY 1388
HS LAP+RYCDDDGN TE YPFN+NGSPLG+AAICSPDGRHLAMMPHPERCFLMWQ+PWY
Sbjct: 1320 HSDLAPLRYCDDDGNVTEAYPFNLNGSPLGIAAICSPDGRHLAMMPHPERCFLMWQFPWY 1379
Query: 1389 PKNWNVDKKGPSPWLKMFQNAREW 1412
P +W+V+K GPSPWLKMFQNAR+W
Sbjct: 1380 PTSWDVEKAGPSPWLKMFQNARDW 1403
|
|
| ZFIN|ZDB-GENE-030131-4420 pfas "phosphoribosylformylglycinamidine synthase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 3475 (1228.3 bits), Expect = 0., P = 0.
Identities = 702/1332 (52%), Positives = 889/1332 (66%)
Query: 93 VVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDS--RISTKKLEVLKWL 150
VV FYR +++ A ++ + + + I+ TE C+N+ LD +S + ++L+WL
Sbjct: 3 VVRFYRT---EETGEARAIRRIAQLYPDVII--TTELCYNVELDGPDSLSVAQKDILRWL 57
Query: 151 LQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRL 210
Y L E L K + G + +VE+GPRL+F+TAWS NAVSIC+ GL++VTR+
Sbjct: 58 FSPPYSVSLL-EEPTL--KAEHGAR--LVEIGPRLNFSTAWSTNAVSICQSAGLSQVTRV 112
Query: 211 ERSRRYLLFS----KGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRFVPV 266
E SRR+L+ K ++D ++ + ++D MTEC+Y + +TSF + P++V V +
Sbjct: 113 ELSRRHLIKPQEGCKVGMKDGEMESLISCLYDSMTECIYAQPITSFAVDIRPQDVFEVDI 172
Query: 267 MENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFF 326
+ GR ALE+ N E+GLAFD DL YYT LF++ +KRNPT+VE FD+AQSNSEHSRHWFF
Sbjct: 173 LGKGRAALEKANDELGLAFDSWDLDYYTALFQK-VKRNPTSVECFDLAQSNSEHSRHWFF 231
Query: 327 TGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQL 386
G++VIDGK TL ++ T Q + N+VI F DNSS IKG ++ + P P
Sbjct: 232 RGRMVIDGKEQKETLFSLIMGTQQHSNQNNVIKFCDNSSGIKGMELRCMYPTNPAQASPY 291
Query: 387 SESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNL 446
V+FTAETHNFP VAP+ GA TG GGRIRD + G+G V+A TAGYC GNL
Sbjct: 292 ESRDTTRHVIFTAETHNFPTGVAPFSGATTGTGGRIRDVQSAGKGGHVIAGTAGYCFGNL 351
Query: 447 NVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSG 506
++ G PWE+ + YPS+ A PLQ+ I+AS+GASDYGNKFGEP++ G+ R+FGMRL +G
Sbjct: 352 HIPGFVLPWEEEGWEYPSSFAPPLQVAIEASDGASDYGNKFGEPVLAGFARSFGMRLANG 411
Query: 507 QRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIXXXXXXXXXXXXX-QN 565
+RREW+KPIMFSGG+G I+ H+ K + + GM VVKIGGP YRI N
Sbjct: 412 ERREWIKPIMFSGGLGSIEDPHVRKDQAEPGMEVVKIGGPVYRIGVGGGAASSVQVQGDN 471
Query: 566 DADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKGA 625
+ D AVQRGDAEM QK+ R +RAC+E E NPI SIHDQGAGGN NV+KE+ P GA
Sbjct: 472 SSARDLGAVQRGDAEMEQKMNRALRACLERVEGNPICSIHDQGAGGNGNVLKELSEPAGA 531
Query: 626 EIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGE 685
I GD TLSVLE+WGAEYQE +A+L++P R L+ +C+RE+ + +G I+G+
Sbjct: 532 VIYTEKFKRGDPTLSVLELWGAEYQESNALLLRPSDRSFLERVCQREKCPVDFVGKITGD 591
Query: 686 GRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGI 745
G++VLVD Q G P VDLEL+ VLG MPQK F H + +PL + G+
Sbjct: 592 GKIVLVDGLRKQNDVLEGARNP---VDLELDWVLGKMPQKEFILEHRSVSLQPLTLPAGL 648
Query: 746 TVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLT 805
+V+ +L+RVLRLP+V SKR+LT KVDR VTGLVAQQQ VGPL LADVAV+A + L
Sbjct: 649 SVLPALERVLRLPAVASKRYLTNKVDRSVTGLVAQQQCVGPLHTPLADVAVVALSPFSLQ 708
Query: 806 GGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGA 865
G A AIGEQPIKGLL+P A AR+AVGEALTNLV+A+V++L VK SGNWM+AAKL GEGA
Sbjct: 709 GAATAIGEQPIKGLLSPAAGARMAVGEALTNLVFARVSALKDVKCSGNWMWAAKLPGEGA 768
Query: 866 AMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVT 925
++DA A+ E M +LG+A+DGGKDSLSMAA GE VKAPGSLVISVY CPDIT TVT
Sbjct: 769 CLWDACQAMCEVMGQLGVAVDGGKDSLSMAARVSGETVKAPGSLVISVYAVCPDITATVT 828
Query: 926 PXXXXXXXXXXXXXX-XAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLI 984
P + GK RLGGSALAQ F Q+G+ SPD++ L F T Q LI
Sbjct: 829 PDLDNPEGKGVLLYVPVSAGKYRLGGSALAQCFGQLGDCSPDMDQPDKLSACFNTTQTLI 888
Query: 985 GDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKS 1044
D L++ GHD+SDGGL+ C LEM+FAGNYGI +DL EG + + LF+EEL LVLEV +
Sbjct: 889 QDRLLTAGHDVSDGGLISCLLEMAFAGNYGIEVDLPLEGVDVMEALFSEELSLVLEVCER 948
Query: 1045 NLDTVSKKLHDAGVSAEIIGQVNS---SHSVEIKVDGLTHLNEKTSLLRDMWEETSFELE 1101
N +V ++ DAG+ IG + V + + G LNE+ LR +WE TSFELE
Sbjct: 949 NASSVCQRYTDAGLLCHRIGTTSGFGPDAKVRVSLCGREVLNERLPTLRAIWESTSFELE 1008
Query: 1102 KFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAVIREEGSNGDREM 1161
+ Q CV+ E++GL SR +P KL+F PS T AT K +VAV+REEGSNGDREM
Sbjct: 1009 RLQANPLCVQEEEQGLASRTQPYLKLTFDPSQTPIIKELATGKARVAVVREEGSNGDREM 1068
Query: 1162 SAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPL 1221
SA+ + AGFE WDVTM DL +G+ +LD FR +VFVGGFSYADVL SAKGW+A++ FN
Sbjct: 1069 SASLFMAGFEVWDVTMQDLCSGSTTLDPFRAVVFVGGFSYADVLGSAKGWAATVTFNNRA 1128
Query: 1222 LNQFQEFYKRPDTFSLGVCNGCQLMALLGWIXXXXXXXXXXXXXDPSQPRFVHNESGRFE 1281
+F+ F KR DT SLGVCNGCQL+ALLGW+ S HN+SGRFE
Sbjct: 1129 REEFERFRKREDTLSLGVCNGCQLLALLGWVGEREDGG--------SDVTLTHNKSGRFE 1180
Query: 1282 CRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDD 1341
RF SV I SPAIMLKGMEGS LGVW AHGEG F +++ S LAP+RY DD
Sbjct: 1181 SRFVSVGILPSPAIMLKGMEGSALGVWVAHGEGLMQFRSPEAQQKLIGSSLAPLRYVDDS 1240
Query: 1342 GNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSP 1401
GNPTE+YP N NGS GVA ICS DGRHLAMMPHPER L WQ+ W P++ + PSP
Sbjct: 1241 GNPTEIYPINPNGSAQGVAGICSADGRHLAMMPHPERAVLSWQWAWAPQHLRGSLE-PSP 1299
Query: 1402 WLKMFQNAREWC 1413
WL MF+NA WC
Sbjct: 1300 WLSMFRNAAAWC 1311
|
|
| UNIPROTKB|F1N4K1 PFAS "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 3320 (1173.8 bits), Expect = 0., P = 0.
Identities = 689/1341 (51%), Positives = 885/1341 (65%)
Query: 93 VVHFYRIPLLQDSAAAELL-KSVQKKISNQIVGLKTEHCFNIG--LDSRISTKKLEVLKW 149
V+HFY P + AA+E + + +Q+++ ++ G+KTE C+N+ +S S K+++ L W
Sbjct: 4 VLHFYVRPSGHERAASEYIQRKLQRELP-ELQGVKTEQCYNVNWAAESFPSNKEMKKLTW 62
Query: 150 LLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTR 209
L +++ ES+L + G +++EVGPRL+F+T S+N VS+C+ GL V R
Sbjct: 63 LFGCPLLLDDVAQESWL----RPGPTDLLLEVGPRLNFSTPTSSNIVSVCQAAGLGAVDR 118
Query: 210 LERSRRYLL-FSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRF-VPVM 267
+E +RRYLL F+ D + A + HDRMTE + + + SF + +P + + V+
Sbjct: 119 VEPTRRYLLSFAHPPSADLEAIALATL-HDRMTEQHFPQPIQSFSSGCIPAPLSGPIDVL 177
Query: 268 ENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFT 327
GR ALE+ NQE+GLA D DL +YT+ F+E ++RNP+TVE+FD+AQSNSEHSRHWFF
Sbjct: 178 AEGRSALEKANQELGLALDSWDLDFYTKRFQE-LQRNPSTVEVFDLAQSNSEHSRHWFFK 236
Query: 328 GKIVIDGKPMVRTLMQIVKST-LQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQL 386
G++ +DG+ + +L + + ST +NPNN V+ F DNSSAI+G V+ LRP P +R
Sbjct: 237 GRLHVDGQELPHSLFESIMSTQASSNPNN-VLKFCDNSSAIQGKEVRFLRPKDP-TRPSS 294
Query: 387 SESSQDL-DVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGN 445
+ Q L V+FTAETHNFP VAP+ GA TG GGRIRD TGRG+ VVA TAGYC GN
Sbjct: 295 FQQCQGLRHVVFTAETHNFPTGVAPFSGAATGTGGRIRDVQCTGRGAHVVAGTAGYCFGN 354
Query: 446 LNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPS 505
L++ G PWEDPSF YP N A PL+I I+ASNGASDYGNKFGEP++ G+ R+ G++LP
Sbjct: 355 LHIPGYSMPWEDPSFQYPGNFARPLEIAIEASNGASDYGNKFGEPVLAGFARSLGLQLPD 414
Query: 506 GQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIXXXXXXXXXXXXX-Q 564
GQRREW+KPIMFSGGIG ++ H+SK P+ GM VVKIGGP YRI
Sbjct: 415 GQRREWIKPIMFSGGIGSMEAEHVSKEPPETGMDVVKIGGPVYRIGVGGGAASSVQVQGD 474
Query: 565 NDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKG 624
N +DLDF AVQRGD EM QK+ RV+RAC+E NPI S+HDQGAGGN NV+KE+ P G
Sbjct: 475 NASDLDFGAVQRGDPEMEQKMNRVIRACVEAPGGNPICSLHDQGAGGNGNVLKELSDPAG 534
Query: 625 AEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISG 684
A I +GD TL+ LEIWGAEYQE +A+L++P RD L + RER + +GTI+G
Sbjct: 535 AVIHTSCFQLGDPTLNALEIWGAEYQESNALLLRPSDRDFLSCVSARERCPVCFVGTITG 594
Query: 685 EGRVVLVDSAAVQKC---QSSGLPPPPPA-VDLELERVLGDMPQKTFEFHHADQAREPLD 740
+ R+VLVD Q P PPP VDL+L+ VLG MPQK F + +PL
Sbjct: 595 DRRIVLVDDREWPMGTGGQVDAPPTPPPTPVDLDLDWVLGKMPQKEFFLQRSLPLLQPLT 654
Query: 741 IAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQT 800
+ PG++V +L RVLRLP+V SKR+LT KVDR V GLVAQQQ VGPLQ LADVAV+A +
Sbjct: 655 LPPGLSVRQALARVLRLPAVASKRYLTNKVDRSVGGLVAQQQCVGPLQTPLADVAVVALS 714
Query: 801 YTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKL 860
+ +L G A A+GEQP+K LL+PK ARLAV EALTNLV+A VT L VK SGNWM+AAKL
Sbjct: 715 HQELVGAATALGEQPVKSLLDPKVAARLAVAEALTNLVFALVTDLQDVKCSGNWMWAAKL 774
Query: 861 DGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDI 920
GEGAA+ DA A+ M LG+A+DGGKDSLSMAA G E V+APGSLVIS Y C DI
Sbjct: 775 PGEGAALADACEAMVAVMAALGVAVDGGKDSLSMAARVGSETVRAPGSLVISAYAVCSDI 834
Query: 921 TKTVTPXXXXXXXXXXXXXX-XAKGKRRLGGSALAQVFDQVGNESPDLEDVPY-LKRVFE 978
T TVTP + G+ RLGG+ALAQ F Q+G + PDL DVP L R F
Sbjct: 835 TATVTPDLKRPGGRGHLLYVPLSPGQHRLGGTALAQCFSQLGEQPPDL-DVPENLVRAFS 893
Query: 979 TVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLV 1038
Q L+ D L+ +GHD+SDGGL+ C LEM+FAGN GI +D+ + G LFAEE GLV
Sbjct: 894 ITQGLLKDRLLCSGHDVSDGGLITCLLEMAFAGNCGIEVDIPAPGVDALPVLFAEEPGLV 953
Query: 1039 LEVSKSNLDTVSKKLHDAGVSAEIIGQVNSS--HS-VEIKVDGLTHLNEKTSLLRDMWEE 1095
LEV + +L V + +AG+ +G + H+ V + V+ L E LR +WEE
Sbjct: 954 LEVQEPDLAQVLMRYRNAGLHCLELGLTGDTGPHAMVRVSVNRTVVLEEPVGQLRALWEE 1013
Query: 1096 TSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAVIREEGS 1155
TSF+L++ Q CV E++GL+ R P + L T P+VA+IREEGS
Sbjct: 1014 TSFQLDRLQAKPHCVAQEEQGLRERAGPTFCLPPTFPRASVPCEPGGPAPRVAIIREEGS 1073
Query: 1156 NGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASI 1215
NGDREM+ AF+ AGFE WDVTM DL +GAI LD FRG+ FVGGFSYADVL SAKGW+A++
Sbjct: 1074 NGDREMADAFHLAGFEVWDVTMQDLCSGAIGLDTFRGVAFVGGFSYADVLGSAKGWAAAV 1133
Query: 1216 RFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIXXXXXXXXXXXXXD--PSQPRFV 1273
FN + + F +RPDTFSLGVCNGCQL+ALLGW+ + P++P +
Sbjct: 1134 TFNPQAGAEMKRFRQRPDTFSLGVCNGCQLLALLGWVGGSSSEEVVEMCQESWPARPGLL 1193
Query: 1274 --HNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSH 1331
HN SGRFE R++SV + PA+ML+GMEG+ L VW+AHGEG F + ++
Sbjct: 1194 LRHNLSGRFESRWASVRVGPGPALMLRGMEGAVLPVWSAHGEGYMAFSSPELQAQMEARG 1253
Query: 1332 LAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKN 1391
LAP+ + DDDGNPTE YP N NGSP GVA ICSPDGRHLA+MPHPER WQ+ W P
Sbjct: 1254 LAPLHWADDDGNPTEQYPLNPNGSPGGVAGICSPDGRHLALMPHPERSVRPWQWAWRPPP 1313
Query: 1392 WNVDKKGPSPWLKMFQNAREW 1412
+ D SPWL++F NAR W
Sbjct: 1314 F--DTLTTSPWLQLFINARNW 1332
|
|
| UNIPROTKB|I3L712 PFAS "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 3285 (1161.4 bits), Expect = 0., P = 0.
Identities = 681/1342 (50%), Positives = 876/1342 (65%)
Query: 93 VVHFYRIPLLQDSAAAELLKSVQKKISNQIV---GLKTEHCFNIG--LDSRISTKKLEVL 147
V+HF+ P + A + Q+K+ ++ G+KTE C+N+ +S S ++++ L
Sbjct: 4 VLHFFVRPSGHEGADSAY---TQRKLRGELPALQGIKTELCYNVNWTAESFPSAEEMKKL 60
Query: 148 KWLLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEV 207
WL +++ ES+L G +++EVGPRL+ +T S N VS+CRV GL V
Sbjct: 61 TWLFGCPLLLDDVAQESWL----LPGSNDLLLEVGPRLNISTPTSTNIVSVCRVAGLGAV 116
Query: 208 TRLERSRRYLL-FSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRF-VP 265
R+E +RRYLL F+ + + A + HDRMTE + + SF VP + +
Sbjct: 117 DRVETTRRYLLSFAHPPSAEMEAMALATL-HDRMTEQHFPRPIQSFSLGCVPAPLSGPID 175
Query: 266 VMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWF 325
++ GR ALE+ NQE+GLA D DL +YT+ F+E ++RNP+ VE FD+AQSNSEHSRHWF
Sbjct: 176 ILAEGRSALEKANQELGLALDSWDLDFYTKRFQE-LQRNPSIVEAFDLAQSNSEHSRHWF 234
Query: 326 FTGKIVIDGKPMVRTLMQIVKST-LQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRC 384
F G++ +DG+ + +L++ + ST +NPNN ++ F DNSSAI+G V+ LRP P
Sbjct: 235 FKGRLHMDGQELATSLLEAIMSTQASSNPNN-ILKFCDNSSAIQGKEVRFLRPEDPARPS 293
Query: 385 QLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVG 444
+ + V+FTAETHNFP VAP+ GA TG GGRIRD TGRG+ VVA TAGYC G
Sbjct: 294 RFQQRQGLRHVVFTAETHNFPTGVAPFSGATTGTGGRIRDVQCTGRGAHVVAGTAGYCFG 353
Query: 445 NLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLP 504
NL+V G PWEDPSF YP N A PL+I I+ASNGASDYGNKFGEP++ G+ R+FG++LP
Sbjct: 354 NLHVPGYSLPWEDPSFPYPGNFARPLEIAIEASNGASDYGNKFGEPVLAGFARSFGLQLP 413
Query: 505 SGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIXXXXXXXXXXXXX- 563
GQRREW+KPIMFSGGIG ++ H+SK P+ GM VVK+GGP YRI
Sbjct: 414 DGQRREWIKPIMFSGGIGSMEAEHMSKEPPEPGMDVVKVGGPVYRIGVGGGAASSVQVQG 473
Query: 564 QNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPK 623
N ++LDF AVQRGD EM QK+ RV+RAC+E NPI S+HDQGAGGN NV+KE+ P
Sbjct: 474 DNASNLDFGAVQRGDPEMEQKMNRVIRACVEAPRGNPICSLHDQGAGGNGNVLKELSDPA 533
Query: 624 GAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTIS 683
GA I + D TL+ LEIWGAEYQE +A+L++P RD L + RER +GTI+
Sbjct: 534 GAIIYTSRFQLADPTLNALEIWGAEYQESNALLLRPPDRDFLMRVSARERSPACFVGTIT 593
Query: 684 GEGRVVLVDS--AAVQKCQSSGLPP-PPPA-VDLELERVLGDMPQKTFEFHHADQAREPL 739
+GR+VLVD V + PP PPP VDL+L+ VLG MP+K F + +PL
Sbjct: 594 RDGRIVLVDDREGPVGRDGQGDAPPAPPPTPVDLDLDWVLGKMPRKEFFLQRSLPVLQPL 653
Query: 740 DIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQ 799
+ PG++V +L+RVLRLP+V SKR+LT KVDR V GLVAQQQ VGPLQ LADVAV+A
Sbjct: 654 ALPPGLSVRQALERVLRLPAVASKRYLTNKVDRSVGGLVAQQQCVGPLQTPLADVAVVAL 713
Query: 800 TYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAK 859
++ +L G A A+GEQP+K LL+PK ARLAV EALTNLV+A VT L VK SGNWM+AAK
Sbjct: 714 SHQELVGAATALGEQPVKSLLDPKVAARLAVAEALTNLVFALVTDLRDVKCSGNWMWAAK 773
Query: 860 LDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPD 919
L GEGAA+ DA A+ M LG+A+DGGKDSLSMAA G E V+APGSLVIS Y CPD
Sbjct: 774 LPGEGAALADACEAMVAVMAALGVAVDGGKDSLSMAARVGSETVRAPGSLVISAYAVCPD 833
Query: 920 ITKTVTPXXXXXXXXXXXXXX-XAKGKRRLGGSALAQVFDQVGNESPDLEDVPY-LKRVF 977
IT TVTP + G+ RLGG+ALAQ F Q+G + PDL D+P L R F
Sbjct: 834 ITATVTPDLKHPGGRGRLLYVPLSPGQHRLGGTALAQCFSQLGEQPPDL-DLPENLVRAF 892
Query: 978 ETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGL 1037
Q L+ D L+S+GHD+SDGGL+ C LEM+FAGN GI +DL + G LFAEE GL
Sbjct: 893 NITQGLLKDRLLSSGHDVSDGGLITCLLEMAFAGNCGIEVDLPAPGVDALPVLFAEEPGL 952
Query: 1038 VLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSS--HS-VEIKVDGLTHLNEKTSLLRDMWE 1094
LEV + +L V + D+G+ +G + H+ V I V+G + E LR +WE
Sbjct: 953 ALEVQEPDLARVLARYRDSGLHCLELGCTGDAGPHAMVRISVNGAVAVEEPVGRLRSLWE 1012
Query: 1095 ETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAVIREEG 1154
ETSF+LE+ Q CV E+ GL+ R P + L T + + P+VA+ REEG
Sbjct: 1013 ETSFQLERLQAEPQCVAEEELGLRERTGPTYYLPPTFPKASVPHAPGGAAPRVAIFREEG 1072
Query: 1155 SNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSAS 1214
SNGDREM+ AF+ AGFE WDVTM DL +GAI LD FRG FVGGFSYADVL SAKGW+A+
Sbjct: 1073 SNGDREMADAFHLAGFEVWDVTMQDLCSGAIGLDTFRGAAFVGGFSYADVLGSAKGWAAA 1132
Query: 1215 IRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIXXXXXXXXXXXXXD--PSQPRF 1272
+ FN + + F +RPDTFSLGVCNGCQL+ALLGW+ D P++P
Sbjct: 1133 VTFNPRAGAELRRFRERPDTFSLGVCNGCQLLALLGWVGGSPGEEAAERGQDSWPARPGL 1192
Query: 1273 V--HNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHS 1330
+ HN SGR+E R++SV + PA+ML+GMEG+ L VW+AHGEG F + +I
Sbjct: 1193 LLRHNLSGRYESRWASVRVGPGPALMLRGMEGAVLPVWSAHGEGYMAFSSPELQAQIEAR 1252
Query: 1331 HLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPK 1390
LAP+ + DDDGNPTE YP N NGSP GVA +CSPDGRHLA+MPHPER WQ+ W P
Sbjct: 1253 GLAPLHWADDDGNPTEQYPLNPNGSPGGVAGVCSPDGRHLALMPHPERSVRPWQWAWRPP 1312
Query: 1391 NWNVDKKGPSPWLKMFQNAREW 1412
+ D SPWL++F NA++W
Sbjct: 1313 PF--DTLATSPWLQLFVNAQKW 1332
|
|
| UNIPROTKB|O15067 PFAS "Phosphoribosylformylglycinamidine synthase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 3279 (1159.3 bits), Expect = 0., P = 0.
Identities = 687/1342 (51%), Positives = 881/1342 (65%)
Query: 93 VVHFYRIPLLQDSAA-AELLKSVQKKISNQIVGLKTEHCFNIGLDSRI--STKKLEVLKW 149
V+HFY P + AA + +Q K+ ++ G++TE C+N+ + S ++ + L W
Sbjct: 4 VLHFYVRPSGHEGAAPGHTRRKLQGKLP-ELQGVETELCYNVNWTAEALPSAEETKKLMW 62
Query: 150 LLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTR 209
L +++ ES+L G +++EVGPRL+F+T S N VS+CR GL V R
Sbjct: 63 LFGCPLLLDDVARESWL----LPGSNDLLLEVGPRLNFSTPTSTNIVSVCRATGLGPVDR 118
Query: 210 LERSRRYLLFSKGALQDNQINDFA-AMVHDRMTECVYTEKLTSFETSVVPEEVRF-VPVM 267
+E +RRY L S ++ A A +HDRMTE + + SF +PE + + ++
Sbjct: 119 VETTRRYRL-SFAHPPSAEVEAIALATLHDRMTEQHFPHPIQSFSPESMPEPLNGPINIL 177
Query: 268 ENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFT 327
GR ALE+ NQE+GLA D DL +YT+ F+E ++RNP+TVE FD+AQSNSEHSRHWFF
Sbjct: 178 GEGRLALEKANQELGLALDSWDLDFYTKRFQE-LQRNPSTVEAFDLAQSNSEHSRHWFFK 236
Query: 328 GKIVIDGKPMVRTLMQIVKSTLQA-NPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQL 386
G++ +DG+ +V +L + + ST ++ NPNN V+ F DNSSAI+G V+ LRP P +R
Sbjct: 237 GQLHVDGQKLVHSLFESIMSTQESSNPNN-VLKFCDNSSAIQGKEVRFLRPEDP-TRPSR 294
Query: 387 SESSQDL-DVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGN 445
+ Q L V+FTAETHNFP V P+ GA TG GGRIRD TGRG+ VVA TAGYC GN
Sbjct: 295 FQQQQGLRHVVFTAETHNFPTGVCPFSGATTGTGGRIRDVQCTGRGAHVVAGTAGYCFGN 354
Query: 446 LNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPS 505
L++ G PWEDPSF YP N A PL++ I+ASNGASDYGNKFGEP++ G+ R+ G++LP
Sbjct: 355 LHIPGYNLPWEDPSFQYPGNFARPLEVAIEASNGASDYGNKFGEPVLAGFARSLGLQLPD 414
Query: 506 GQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIXXXXXXXXXXXXX-Q 564
GQRREW+KPIMFSGGIG ++ +HISK P+ GM VVK+GGP YRI
Sbjct: 415 GQRREWIKPIMFSGGIGSMEADHISKEAPEPGMEVVKVGGPVYRIGVGGGAASSVQVQGD 474
Query: 565 NDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKG 624
N +DLDF AVQRGD EM QK+ RV+RAC+E + NPI S+HDQGAGGN NV+KE+ P G
Sbjct: 475 NTSDLDFGAVQRGDPEMEQKMNRVIRACVEAPKGNPICSLHDQGAGGNGNVLKELSDPAG 534
Query: 625 AEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISG 684
A I +GD TL+ LEIWGAEYQE +A+L++ +RD L + RER +GTI+G
Sbjct: 535 AIIYTSRFQLGDPTLNALEIWGAEYQESNALLLRSPNRDFLTHVSARERCPACFVGTITG 594
Query: 685 EGRVVLVDS--AAVQKCQSSGLPPPP-PA-VDLELERVLGDMPQKTFEFHHADQAREPLD 740
+ R+VLVD V++ PP P P VDLELE VLG MP+K F +PL
Sbjct: 595 DRRIVLVDDRECPVRRNGQGDAPPTPLPTPVDLELEWVLGKMPRKEFFLQRKPPMLQPLA 654
Query: 741 IAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQT 800
+ PG++V +L+RVLRLP+V SKR+LT KVDR V GLVAQQQ VGPLQ LADVAV+A +
Sbjct: 655 LPPGLSVHQALERVLRLPAVASKRYLTNKVDRSVGGLVAQQQCVGPLQTPLADVAVVALS 714
Query: 801 YTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKL 860
+ +L G A A+GEQP+K LL+PK ARLAV EALTNLV+A VT L VK SGNWM+AAKL
Sbjct: 715 HEELIGAATALGEQPVKSLLDPKVAARLAVAEALTNLVFALVTDLRDVKCSGNWMWAAKL 774
Query: 861 DGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDI 920
GEGAA+ DA A+ M LG+A+DGGKDSLSMAA G E V+APGSLVIS Y CPDI
Sbjct: 775 PGEGAALADACEAMVAVMAALGVAVDGGKDSLSMAARVGTETVRAPGSLVISAYAVCPDI 834
Query: 921 TKTVTPXXXX-XXXXXXXXXXXAKGKRRLGGSALAQVFDQVGNESPDLEDVPY-LKRVFE 978
T TVTP + G+ RLGG+ALAQ F Q+G PDL D+P L R F
Sbjct: 835 TATVTPDLKHPEGRGHLLYVALSPGQHRLGGTALAQCFSQLGEHPPDL-DLPENLVRAFS 893
Query: 979 TVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLV 1038
Q L+ D L+ +GHD+SDGGL+ C LEM+FAGN G+ +D+ + LFAEE GLV
Sbjct: 894 ITQGLLKDRLLCSGHDVSDGGLVTCLLEMAFAGNCGLQVDVPVPRVDVLSVLFAEEPGLV 953
Query: 1039 LEVSKSNLDTVSKKLHDAGVSAEIIGQVNSS--HS-VEIKVDGLTHLNEKTSLLRDMWEE 1095
LEV + +L V K+ DAG+ +G + H+ V + V+G L E LR +WEE
Sbjct: 954 LEVQEPDLAQVLKRYRDAGLHCLELGHTGEAGPHAMVRVSVNGAVVLEEPVGELRALWEE 1013
Query: 1096 TSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFT-PSLTDEKYMNATSKPKVAVIREEG 1154
TSF+L++ Q CV E+ GL+ R P + L T P + + S P+VA++REEG
Sbjct: 1014 TSFQLDRLQAEPRCVAEEERGLRERMGPSYCLPPTFPKASVPREPGGPS-PRVAILREEG 1072
Query: 1155 SNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSAS 1214
SNGDREM+ AF+ AGFE WDVTM DL +GAI LD FRG+ FVGGFSYADVL SAKGW+A+
Sbjct: 1073 SNGDREMADAFHLAGFEVWDVTMQDLCSGAIGLDTFRGVAFVGGFSYADVLGSAKGWAAA 1132
Query: 1215 IRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIXXXXXXXXXXXXXD--PSQPRF 1272
+ F+ + + F KRPDTFSLGVCNGCQL+ALLGW+ D P++P
Sbjct: 1133 VTFHPRAGAELRRFRKRPDTFSLGVCNGCQLLALLGWVGGDPNEDAAEMGPDSQPARPGL 1192
Query: 1273 V--HNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHS 1330
+ HN SGR+E R++SV + PA+ML+GMEG+ L VW+AHGEG F + +I
Sbjct: 1193 LLRHNLSGRYESRWASVRVGPGPALMLRGMEGAVLPVWSAHGEGYVAFSSPELQAQIEAR 1252
Query: 1331 HLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPK 1390
LAP+ + DDDGNPTE YP N NGSP GVA ICS DGRHLA+MPHPER WQ+ W P
Sbjct: 1253 GLAPLHWADDDGNPTEQYPLNPNGSPGGVAGICSCDGRHLAVMPHPERAVRPWQWAWRPP 1312
Query: 1391 NWNVDKKGPSPWLKMFQNAREW 1412
+ D SPWL++F NAR W
Sbjct: 1313 PF--DTLTTSPWLQLFINARNW 1332
|
|
| MGI|MGI:2684864 Pfas "phosphoribosylformylglycinamidine synthase (FGAR amidotransferase)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 3257 (1151.6 bits), Expect = 0., P = 0.
Identities = 676/1340 (50%), Positives = 871/1340 (65%)
Query: 93 VVHFYRIPLLQDSAAA-ELLKSVQKKISNQIVGLKTEHCFNI--GLDSRISTKKLEVLKW 149
V+HFY P + AA+ + + +Q+K+ + ++TE C+N+ ++ ++++ L W
Sbjct: 4 VLHFYVRPSGHEGAASGRVFRRLQEKLPT-LQSVETELCYNVHWAAETLPWAEEMKKLMW 62
Query: 150 LLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTR 209
L +++ E +L G +++EVGPRL+F+T S N VS+C+ GL V R
Sbjct: 63 LFGCPLVRDDVAQEPWLVP----GSNDLLLEVGPRLNFSTPASTNIVSVCQAAGLRAVDR 118
Query: 210 LERSRRYLL-FSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVR-FVPVM 267
+E +RRY L F+ + + AA+ HDRMTE Y + + SF +P ++ + ++
Sbjct: 119 VETTRRYRLSFTDHPTAEMEAISLAAL-HDRMTEQHYPDPIQSFSPQSIPAPLKGSIDIL 177
Query: 268 ENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFT 327
GR ALE+ NQE+GLA D DL +YT+ F+E ++RNP+TVE+FD+AQSNSEHSRHWFF
Sbjct: 178 AEGRPALEKANQELGLALDSWDLDFYTKRFQE-LQRNPSTVEVFDLAQSNSEHSRHWFFK 236
Query: 328 GKIVIDGKPMVRTLMQIVKST-LQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQL 386
G++ +DGK + +L + + ST +NPNN V+ F DNSSAI+G VK LRP + +R
Sbjct: 237 GQLHVDGKKLAHSLFESIMSTQASSNPNN-VLKFCDNSSAIQGKKVKFLRP-EDSTRPSC 294
Query: 387 SESSQDL-DVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGN 445
+ Q L V+FTAETHNFP VAP+ GA TG GGRIRD TGRG+ VVA TAGYC GN
Sbjct: 295 FQQQQGLRHVVFTAETHNFPTGVAPFSGATTGTGGRIRDVQCTGRGAHVVAGTAGYCFGN 354
Query: 446 LNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPS 505
L++ PWEDPSF YP N A PL++ I+ASNGASDYGNKFGEP++ G+ R+ G++LP
Sbjct: 355 LHIPDYNLPWEDPSFQYPGNFARPLEVAIEASNGASDYGNKFGEPVLAGFARSLGLQLPD 414
Query: 506 GQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIXXXXXXXXXXXXX-Q 564
GQRREW+KPIMFSGGIG ++ H+ K P+ GM VVK+GGP YRI
Sbjct: 415 GQRREWIKPIMFSGGIGSMEAKHVGKKPPEPGMEVVKVGGPVYRIGVGGGAASSVQVQGD 474
Query: 565 NDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKG 624
N +DLDF AVQRGD EM QK+ RV+RAC+E NPI S+HDQGAGGN NV+KE+ P+G
Sbjct: 475 NTSDLDFGAVQRGDPEMEQKMNRVIRACVEAPGGNPICSLHDQGAGGNGNVLKELSDPEG 534
Query: 625 AEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISG 684
A I +GD TL+ LEIWGAEYQE +A+L++P RD L RER +GTI+G
Sbjct: 535 AIIYTSRFQLGDPTLNALEIWGAEYQESNALLLRPSDRDFLSRASARERCPACFVGTITG 594
Query: 685 EGRVVLVDS--AAVQKCQSSGLP-PPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDI 741
+ R+VLVD V K P PP VDL+L+ VLG MPQK F +PL +
Sbjct: 595 DKRIVLVDDRECLVGKTGQGDAPLTPPTPVDLDLDWVLGKMPQKEFFLQRKPPVLQPLAL 654
Query: 742 APGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTY 801
P ++V +L RVLRLP+V SKR+LT KVDR V GLVAQQQ VGPLQ LADVAV+A ++
Sbjct: 655 PPELSVRQALNRVLRLPAVASKRYLTNKVDRSVGGLVAQQQCVGPLQTPLADVAVVALSH 714
Query: 802 TDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLD 861
+ G A A+GEQP+K LL+PKA ARLAV EALTNLV+A VT L VK SGNWM+AAKL
Sbjct: 715 QECIGAATALGEQPVKSLLDPKAAARLAVSEALTNLVFALVTDLRDVKCSGNWMWAAKLP 774
Query: 862 GEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDIT 921
GEGAA+ DA A+ M LG+A+DGGKDSLSMAA G E V+APGSLVIS Y CPDIT
Sbjct: 775 GEGAALADACEAMVAVMAALGVAVDGGKDSLSMAARVGTETVQAPGSLVISAYAVCPDIT 834
Query: 922 KTVTPXXXXXXXXXXXXXX-XAKGKRRLGGSALAQVFDQVGNESPDLEDVPY-LKRVFET 979
TVTP + G+ RLGG+ALAQ F Q+G PDL D+P L R F
Sbjct: 835 ATVTPDLKHPGGKGHLLYVPLSPGQHRLGGTALAQCFSQLGEHPPDL-DLPENLVRAFHI 893
Query: 980 VQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVL 1039
Q L+ + + +GHD+SDGGL+ C LEM+FAGN GI +D+ + G LFAEE GLVL
Sbjct: 894 TQGLLKECRLCSGHDVSDGGLVTCLLEMAFAGNCGIEVDVPAPGIHALPVLFAEEPGLVL 953
Query: 1040 EVSKSNLDTVSKKLHDAGVSA-EI--IGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEET 1096
EV ++++ V ++ AG+ E+ G+ I V+ + E LR +WEET
Sbjct: 954 EVQEADVAGVRQRYESAGLRCLELGHTGEAGPQAMARISVNKAVVVEEPVGELRALWEET 1013
Query: 1097 SFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAVIREEGSN 1156
SF+L+ Q CV EK+GLK R P + L T + P+VA++REEGSN
Sbjct: 1014 SFQLDLLQAEPRCVIEEKQGLKERTGPSYYLPPTFPVASVPCKPGGPVPRVAILREEGSN 1073
Query: 1157 GDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIR 1216
GDREM+ AF+ AGFE WDVTM DL +GAI LD FRG+ FVGGFSYADVL SAKGW+A++
Sbjct: 1074 GDREMADAFHLAGFEVWDVTMQDLCSGAIRLDTFRGVAFVGGFSYADVLGSAKGWAAAVT 1133
Query: 1217 FNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIXXXXXXXXXXXXXD--PSQPRFV- 1273
FN + F +RPDTFSLGVCNGCQL+ALLGW+ D P+QP +
Sbjct: 1134 FNPQAREELGRFRRRPDTFSLGVCNGCQLLALLGWVGSDPSEEQAEPGQDSQPTQPGLLL 1193
Query: 1274 -HNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHL 1332
HN SGRFE R+++V +E PA+ML+GMEGS L VW+AHGEG F + +I L
Sbjct: 1194 RHNLSGRFESRWATVRVEPGPALMLRGMEGSVLPVWSAHGEGYMAFSSPELQAKIEAKGL 1253
Query: 1333 APVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNW 1392
P+ + DDDGNPTE YP N NGSP G+A ICS DGRHLA+MPHPER +WQ+ W P +
Sbjct: 1254 VPLHWADDDGNPTEQYPLNPNGSPGGIAGICSQDGRHLALMPHPERAVRLWQWAWRPSPF 1313
Query: 1393 NVDKKGPSPWLKMFQNAREW 1412
+V SPWL++F NAR W
Sbjct: 1314 DV--LPTSPWLQLFINARNW 1331
|
|
| UNIPROTKB|E2QYQ9 PFAS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 3225 (1140.3 bits), Expect = 0., P = 0.
Identities = 674/1346 (50%), Positives = 867/1346 (64%)
Query: 93 VVHFYRIPLLQDSAAAELLKSVQKKISNQIVGL---KTEHCFNIGLDSRI--STKKLEVL 147
V+HFY P + AA+E Q+K+ ++ L KTE C+N+ ++ + ++++ L
Sbjct: 4 VLHFYVHPSGHERAASE---HTQRKLQGKLPALQSVKTELCYNVNWTAKSPPNAEEMKKL 60
Query: 148 KWLLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEV 207
WL ++ ES+L +++EVGPRL+F+T S N VS+C GL V
Sbjct: 61 MWLFGCPLLLGDVAQESWLHPDSSD----LLLEVGPRLNFSTPASTNVVSVCWAAGLGAV 116
Query: 208 TRLERSRRYLLFSKGALQDNQINDFA-AMVHDRMTECVYTEKLTSFETSVVPEEVR-FVP 265
R+E +RRYLL S ++ A A +HDRMTE + + SF + + +
Sbjct: 117 DRVETTRRYLL-SFAHPPSTEMETIALATLHDRMTEQHFPHPIQSFSLGSISTPLNGHIN 175
Query: 266 VMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWF 325
++ GR ALE+ NQE+GLA D DL +YT+ F+E ++RNP+TVE FD+AQSNSEHSRHWF
Sbjct: 176 ILAEGRCALEKANQELGLALDSWDLDFYTKRFQE-LQRNPSTVEAFDLAQSNSEHSRHWF 234
Query: 326 FTGKIVIDGKPMVRTLMQIVKST-LQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRC 384
F G++ +DG+ + +L + + ST +NPNN V+ F DNSSAI+G V+ LRP P
Sbjct: 235 FKGQLHMDGQELAHSLFESIMSTQASSNPNN-VLKFCDNSSAIQGKEVQFLRPEDPTQPS 293
Query: 385 QLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVG 444
V+FTAETHNFP VAP+ GA TG GGRIRD TGRG+ VVA TAGYC G
Sbjct: 294 CFQPHRALRHVVFTAETHNFPTGVAPFSGATTGTGGRIRDVQCTGRGAHVVAGTAGYCFG 353
Query: 445 NLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLP 504
NL++ G PWEDPSF YP N A PL++ I+ASNGASDYGNKFGEP++ G+TR+FG++LP
Sbjct: 354 NLHIPGYNLPWEDPSFQYPENFARPLEVAIEASNGASDYGNKFGEPVLAGFTRSFGLQLP 413
Query: 505 SGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIXXXXXXXXXXXXX- 563
GQRREW+KPIMFSGGIG ++ H+ K P+ GM +VK+GGP YRI
Sbjct: 414 DGQRREWIKPIMFSGGIGSMEAEHVRKEPPEPGMDIVKVGGPVYRIGVGGGAASSVQVQG 473
Query: 564 QNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPK 623
N +DLDF AVQRGD EM QK+ RV+RAC+E NPI S+HDQGAGGN NV+KE+ P
Sbjct: 474 DNTSDLDFGAVQRGDPEMEQKMNRVIRACVEAARGNPICSLHDQGAGGNGNVLKELSDPA 533
Query: 624 GAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTIS 683
GA I +GD TL+ LEIWGAEYQE +A+L++P RD L + RER +GTI+
Sbjct: 534 GAVIYTSRFQLGDPTLNALEIWGAEYQESNALLLRPLDRDFLSRVSARERCPTCFVGTIT 593
Query: 684 GEGRVVLVDSAAV----QKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPL 739
G+ R+VLVD + + L PP VDLEL+ VLG MP+K F + +PL
Sbjct: 594 GDKRIVLVDDREYPVGRNGHEDASLSSPPTPVDLELDWVLGKMPRKEFFLKRSHPVLKPL 653
Query: 740 DIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQ 799
+ PG+ V +L+RVLRLP+V SKR+LT KVDR V GLVAQQQ VGPL LADVAV+A
Sbjct: 654 ALPPGLRVRQALERVLRLPAVASKRYLTNKVDRSVGGLVAQQQCVGPLHTPLADVAVVAL 713
Query: 800 TYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAK 859
++ +L G A A+GEQP+K LL+PK ARLAV EALTNLV+A VT L VK SGNWM+AAK
Sbjct: 714 SHQELIGAATALGEQPVKSLLDPKVAARLAVAEALTNLVFALVTDLRDVKCSGNWMWAAK 773
Query: 860 LDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPD 919
L GEGAA+ DA A+ M LG+A+DGGKDSLSMAA G E V+APGSLVIS Y CPD
Sbjct: 774 LPGEGAALADACEAMVAVMAALGVAVDGGKDSLSMAARVGSETVRAPGSLVISAYAVCPD 833
Query: 920 ITKTVTPXXXX-XXXXXXXXXXXAKGKRRLGGSALAQVFDQVGNESPDLEDVPY-LKRVF 977
IT TVTP + G+ RLGG+ALAQ F Q+G + P+L D+P L R F
Sbjct: 834 ITATVTPDLKHPGGRGHLLYVSLSPGQHRLGGTALAQCFSQLGEQPPNL-DLPENLVRAF 892
Query: 978 ETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGL 1037
Q L+ D L+ +GHD+SDGGL+ C LEM+FAGN GI + + + G LFAEE GL
Sbjct: 893 SVTQGLLRDRLLCSGHDVSDGGLITCLLEMAFAGNCGIEVHVPAPGVDALSVLFAEEPGL 952
Query: 1038 VLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSS--HS-VEIKVDGLTHLNEKTSLLRDMWE 1094
VLEV +S+L V K+ AG+ +G + H+ V + V+G L E LR +WE
Sbjct: 953 VLEVQESDLAQVLKRYRVAGLHCMELGPTGDAGPHALVRVSVNGAVVLEEAVGQLRAVWE 1012
Query: 1095 ETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFT-PSLTDEKYMNATSKPKVAVIREE 1153
ETSF+L++ Q CV E++GL+ R P + L P + + P+VA++REE
Sbjct: 1013 ETSFQLDRLQAEPRCVAEEEQGLRERMGPRYCLPAAFPKASVPREPGGPV-PRVAILREE 1071
Query: 1154 GSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSA 1213
GSNGDREM+ AF+ AGFE WDVT DL +GAI LD FRG+ FVGGFSYADVL SAKGW+A
Sbjct: 1072 GSNGDREMADAFHLAGFEVWDVTTQDLCSGAIGLDTFRGVAFVGGFSYADVLGSAKGWAA 1131
Query: 1214 SIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIXXX---XXXXXXXXXXD--PS 1268
++ F+ + + F KRPDTFSLGVCNGCQL+ALLGW+ D P+
Sbjct: 1132 AVTFHPVARAELRRFRKRPDTFSLGVCNGCQLLALLGWVGGSPSEEAKETKETSLDSWPA 1191
Query: 1269 QPRFV--HNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDR 1326
P V HN SGRFE R++SV + PA+ML+GMEG+ L VW+AHGEG F + +
Sbjct: 1192 PPGLVLRHNLSGRFESRWASVRVGPGPALMLRGMEGAVLPVWSAHGEGYMAFSSPELQAQ 1251
Query: 1327 ILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYP 1386
I LAP+ + DD+G PTE YP N NGSP GVA +CS DGRHLA+MPHPER WQ+
Sbjct: 1252 IEARGLAPLHWADDNGKPTEQYPMNPNGSPGGVAGVCSLDGRHLAVMPHPERAVRPWQWA 1311
Query: 1387 WYPKNWNVDKKGPSPWLKMFQNAREW 1412
W P + D SPWL++F NAR+W
Sbjct: 1312 WRPPLF--DTVTTSPWLQLFINARDW 1335
|
|
| DICTYBASE|DDB_G0288145 purL "PFAS" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 2549 (902.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 519/1006 (51%), Positives = 679/1006 (67%)
Query: 93 VVHFYRIPLLQDSAAAELLKSVQKKISN-QIVGLKTEHCFNIGL-DS-RISTKKLEVLKW 149
+ FYR P + + +LLK+ KK N I ++TE+CFN+ D+ +++ + L W
Sbjct: 3 IQQFYRKPAISEYEI-KLLKNNLKKQHNIDIESIETEYCFNVQYPDNHKLNESEQSTLVW 61
Query: 150 LLQETYEPENLGTE-SFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVT 208
LL ET+EP+N + SFL+ +I+EVGPR++FTT +S+NA SIC+ C L+ +
Sbjct: 62 LLSETFEPKNFSIDKSFLKTTTTTTENEIIIEVGPRMNFTTTYSSNATSICKSCNLSIID 121
Query: 209 RLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRFVPVME 268
R+ERSRRYL+ S L + QI+ F ++HDRMTEC+Y + SF+T ++P+ V ++PV+E
Sbjct: 122 RIERSRRYLVKSVSKLSEKQIDQFLELIHDRMTECLYPTPIKSFDTGIIPKAVVYIPVVE 181
Query: 269 NGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTG 328
GR ALE +N+EMGLAFDEQDL YT LF+ +KRNP+ VE FDI QSNSEHSRHWFF G
Sbjct: 182 EGRAALERVNKEMGLAFDEQDLALYTDLFQNQLKRNPSDVECFDIGQSNSEHSRHWFFNG 241
Query: 329 KIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSE 388
K+++DG +TL QIVK+TL+ANP NS+I F DNSS+IKGF K L P + E
Sbjct: 242 KLIVDGNMSDKTLFQIVKNTLKANPQNSLIAFSDNSSSIKGFKTKVLIPKSQIEASEYLE 301
Query: 389 SSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNV 448
++ ++FTAETHNFP +AP+ GAETG GGR+RDTHATGRGS VVA T GYCVGNLN+
Sbjct: 302 GEREQPIIFTAETHNFPTGIAPFEGAETGTGGRLRDTHATGRGSLVVAGTVGYCVGNLNI 361
Query: 449 EGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQR 508
G PWE+ + YP N+A+PL+I I+ASNGASDYGNKFGEP+I G+TR++G LP+G+R
Sbjct: 362 PGYELPWENKEYNYPDNMANPLKIEIEASNGASDYGNKFGEPVIIGFTRSYGNTLPNGER 421
Query: 509 REWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIXXXXXXXXXXXXXQNDAD 568
REW+KPIMFSGGIG +D H+ K +P+IGM+VVK GGPAYRI N +
Sbjct: 422 REWIKPIMFSGGIGFMDERHLKKEQPEIGMVVVKAGGPAYRIGMGGGSASSMVGGDNKHE 481
Query: 569 LDFNAVQRGDAEMAQKLYRVVRACIEM---GETNPIISIHDQGAGGNCNVVKEIIYPKGA 625
LDF+AVQRGDAEM QKL R+VR+C+E G NPI+S+HDQGAGG NV+KEI+ P GA
Sbjct: 482 LDFSAVQRGDAEMGQKLNRIVRSCVESEIHGGCNPIVSVHDQGAGGAGNVLKEIVDPLGA 541
Query: 626 EIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGE 685
+I + II GD TLS +EIWGAEYQE DA+L+K E +D L+ + ERER+ +A +G ++G+
Sbjct: 542 KIYLDRIISGDPTLSAMEIWGAEYQENDALLIKAEHKDYLKKVSERERLPIAFVGDVTGD 601
Query: 686 GRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGI 745
G L+ G P V+L L++VL MP KTF H ++ +P + +
Sbjct: 602 GIAQLITK--------DGETP----VNLPLDKVLQKMPPKTFVLDHVEKQLKPFTLPKEL 649
Query: 746 TVMDS-------LKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIA 798
V D L RVLRL SV SKRFL KVDR VTGLVA+QQ VGPL +++VAVI+
Sbjct: 650 LVGDHQTCFNECLNRVLRLLSVGSKRFLINKVDRAVTGLVARQQCVGPLHTPVSNVAVIS 709
Query: 799 QTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAA 858
Y +G A +IGEQPIKG ++ K+MA L VGEALTNL+WA +T L VK SGNWM+AA
Sbjct: 710 SGYFGKSGAATSIGEQPIKGFISAKSMAYLTVGEALTNLMWASITDLGDVKCSGNWMWAA 769
Query: 859 KLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAY---SGG--EVVKAPGSLVISV 913
KL GEG +YDAA + + M+ELGIAIDGGKDSLSMAA S G E+VKAPG+LV+S
Sbjct: 770 KLKGEGVELYDAAIEMHDVMVELGIAIDGGKDSLSMAAKAPKSDGSQELVKAPGALVVST 829
Query: 914 YVTCPDITKTVTPXXXXXXXXXXXXXXXAKG--KRRLGGSALAQVFDQVGNESPDLEDVP 971
YV C DIT TVTP G +GGSAL QVF+QVGN+ P + P
Sbjct: 830 YVPCDDITLTVTPDLKLSSKDDSVILYLDLGCANNFIGGSALTQVFNQVGNDEPH-HNTP 888
Query: 972 YLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDL----NSEGN--S 1025
LK F +Q L+ +L+S GHD SDGGL+ +EMS +GN G+ ++L NS+ + S
Sbjct: 889 LLKNTFMAIQKLVKQQLISAGHDRSDGGLITTLIEMSLSGNRGLEINLPDTHNSDQSPLS 948
Query: 1026 LFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHS 1071
+ + LF+EELG VLE+ KSN V L V ++IG + +++
Sbjct: 949 IIKLLFSEELGAVLEIKKSNQQIVLDILKQFNVPTQVIGNTSCNNN 994
|
|
| RGD|1304926 Pfas "phosphoribosylformylglycinamidine synthase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 2785 (985.4 bits), Expect = 5.6e-290, P = 5.6e-290
Identities = 578/1106 (52%), Positives = 729/1106 (65%)
Query: 185 LSFTTAWSANAVSICRVCGLTEVTRLERSRRYLL-FSKGALQDNQINDFAAMVHDRMTEC 243
L+F+T S N VS+C+ GL V R+E +RRY L F+K + + AA+ HDRMTE
Sbjct: 23 LNFSTPASTNIVSVCQAAGLRAVDRVETTRRYRLSFAKQPTAEMEAISLAAL-HDRMTEQ 81
Query: 244 VYTEKLTSFETSVVPEEVR-FVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIK 302
Y + + SF +P ++ + ++ GR ALE+ NQE+GLA D DL +YT+ F+E ++
Sbjct: 82 HYPDPIQSFSPQSIPAPLKDSINILAEGRPALEKANQELGLALDSWDLDFYTKRFQE-LQ 140
Query: 303 RNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQA-NPNNSVIGFK 361
RNP+TVE+FD+AQSNSEHSRHWFF G++ +DGK + R+L + + ST + NPNN V+ F
Sbjct: 141 RNPSTVEVFDLAQSNSEHSRHWFFKGQLHVDGKKLARSLFESIMSTQSSSNPNN-VLKFC 199
Query: 362 DNSSAIKGFPVKQLRPVQPGSRCQLSESSQDL-DVLFTAETHNFPCAVAPYPGAETGAGG 420
DNSSAI+G V+ LRP + +R + L V+FTAETHNFP VAP+ GA TG GG
Sbjct: 200 DNSSAIQGKEVRFLRP-EDSTRPSCFRQQRGLRHVVFTAETHNFPTGVAPFSGATTGTGG 258
Query: 421 RIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGA 480
RIRD TGRG+ VVA TAGYC GNL++ G PWEDPSF YP N A PL++ I+ASNGA
Sbjct: 259 RIRDVQCTGRGAHVVAGTAGYCFGNLHIPGYNLPWEDPSFQYPGNFARPLEVAIEASNGA 318
Query: 481 SDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLV 540
SDYGNKFGEP++ G+ R+ G++LP GQRREW+KPIMFSGGIG ++ H+ K P+ GM V
Sbjct: 319 SDYGNKFGEPVLAGFARSLGLQLPDGQRREWIKPIMFSGGIGSMEAKHVGKEPPEPGMEV 378
Query: 541 VKIGGPAYRIXXXXXXXXXXXXX-QNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETN 599
VK+GGP YRI N +DLDF AVQRGD EM QK+ RV+RAC+E N
Sbjct: 379 VKVGGPVYRIGVGGGAASSVQVQGDNTSDLDFGAVQRGDPEMEQKMNRVIRACVEAPGGN 438
Query: 600 PIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKP 659
PI S+HDQGAGGN NV+KE+ P GA I +GD TL+ LEIWGAEYQE +A+L++P
Sbjct: 439 PICSLHDQGAGGNGNVLKELSEPAGAVIYTSRFQLGDPTLNALEIWGAEYQESNALLLRP 498
Query: 660 ESRDLLQSICERERVSMAVIGTISGEGRVVLVDS--AAVQKCQSSGLPPPPPA-VDLELE 716
RD L RER +GTI+G+ R+VLVD + K PP PP VDL+L+
Sbjct: 499 SDRDFLSRASARERCPACFVGTITGDKRIVLVDDRECLMGKSGQGDAPPTPPTPVDLDLD 558
Query: 717 RVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTG 776
VLG MPQK F +PL + P ++V +L+RVLRLP+V SKR+LT KVDR V G
Sbjct: 559 WVLGKMPQKEFFLQRKPPVLQPLALPPDLSVGQALERVLRLPAVASKRYLTNKVDRSVGG 618
Query: 777 LVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTN 836
LVAQQQ VGPLQ LADVAV+A ++ +L G A A+GEQP+K LL+PKA ARLAV EALTN
Sbjct: 619 LVAQQQCVGPLQTPLADVAVVALSHQELVGAATALGEQPVKSLLDPKAAARLAVSEALTN 678
Query: 837 LVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAA 896
LV+A VT L VK SGNWM+AAKL GEGA + DA A+ M LG+A+DGGKDSLSMAA
Sbjct: 679 LVFALVTDLRDVKCSGNWMWAAKLPGEGAGLADACEAMVTVMAALGVAVDGGKDSLSMAA 738
Query: 897 YSGGEVVKAPGSLVISVYVTCPDITKTVTPXXXXXXXXXXXXXX-XAKGKRRLGGSALAQ 955
G E V APGSLVIS Y CPDIT TVTP + G+ RLGG+ALAQ
Sbjct: 739 RVGTETVPAPGSLVISAYAVCPDITATVTPDLKHPGGKGHLLYVPLSPGQHRLGGTALAQ 798
Query: 956 VFDQVGNESPDLEDVPY-LKRVFETVQDLI-G----DELVSTGHDISDGGLLVCTLEMSF 1009
F Q+G PDL D+P L R F Q L+ G D + +GHD+SDGGL+ C LEM+F
Sbjct: 799 CFSQLGEHPPDL-DLPENLVRAFHITQGLLKGEWGPDRRLCSGHDVSDGGLVTCLLEMAF 857
Query: 1010 AGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSA-EI--IGQV 1066
AGN GI +D+ + G LFAEE GLVLEV ++++ V ++ AG+ E+ G+
Sbjct: 858 AGNCGIEVDVPAPGIHALPVLFAEEPGLVLEVQEADVAGVLQRYQSAGLHCLELGHTGEA 917
Query: 1067 NSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWK 1126
V + V+G + E LR +WEETSF+L+ Q CV EK+GLK R P +
Sbjct: 918 GPQAMVRVSVNGTVVVEEPVGQLRALWEETSFQLDLLQAEPRCVTEEKQGLKERIGPSYC 977
Query: 1127 LSFTPSLTDEKYMNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAIS 1186
L T + P+VA++REEGSNGDREM+ AF+ AGFE WDVTM DL +GA+
Sbjct: 978 LPPTFPVASVPCKPGGPIPRVAILREEGSNGDREMADAFHLAGFEVWDVTMQDLCSGAVR 1037
Query: 1187 LDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLM 1246
LD FRG+ FVGGFSYADVL SAKGW+A++ FN + F +RPDTFSLGVCNGCQL+
Sbjct: 1038 LDTFRGVAFVGGFSYADVLGSAKGWAAAVTFNPQAREELGRFRRRPDTFSLGVCNGCQLL 1097
Query: 1247 ALLGWIXXXXXXXXXXXXXD--PSQP 1270
ALLGW+ D P+QP
Sbjct: 1098 ALLGWVGSDPNEDQVEPDHDSQPAQP 1123
|
|
| UNIPROTKB|F5GWT9 PFAS "Phosphoribosylformylglycinamidine synthase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 2297 (813.6 bits), Expect = 2.9e-238, P = 2.9e-238
Identities = 481/912 (52%), Positives = 599/912 (65%)
Query: 516 MFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIXXXXXXXXXXXXX-QNDADLDFNAV 574
MFSGGIG ++ +HISK P+ GM VVK+GGP YRI N +DLDF AV
Sbjct: 1 MFSGGIGSMEADHISKEAPEPGMEVVKVGGPVYRIGVGGGAASSVQVQGDNTSDLDFGAV 60
Query: 575 QRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIV 634
QRGD EM QK+ RV+RAC+E + NPI S+HDQGAGGN NV+KE+ P GA I +
Sbjct: 61 QRGDPEMEQKMNRVIRACVEAPKGNPICSLHDQGAGGNGNVLKELSDPAGAIIYTSRFQL 120
Query: 635 GDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDS- 693
GD TL+ LEIWGAEYQE +A+L++ +RD L + RER +GTI+G+ R+VLVD
Sbjct: 121 GDPTLNALEIWGAEYQESNALLLRSPNRDFLTHVSARERCPACFVGTITGDRRIVLVDDR 180
Query: 694 -AAVQKCQSSGLPPPP-PA-VDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDS 750
V++ PP P P VDLELE VLG MP+K F +PL + PG++V +
Sbjct: 181 ECPVRRNGQGDAPPTPLPTPVDLELEWVLGKMPRKEFFLQRKPPMLQPLALPPGLSVHQA 240
Query: 751 LKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACA 810
L+RVLRLP+V SKR+LT KVDR V GLVAQQQ VGPLQ LADVAV+A ++ +L G A A
Sbjct: 241 LERVLRLPAVASKRYLTNKVDRSVGGLVAQQQCVGPLQTPLADVAVVALSHEELIGAATA 300
Query: 811 IGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDA 870
+GEQP+K LL+PK ARLAV EALTNLV+A VT L VK SGNWM+AAKL GEGAA+ DA
Sbjct: 301 LGEQPVKSLLDPKVAARLAVAEALTNLVFALVTDLRDVKCSGNWMWAAKLPGEGAALADA 360
Query: 871 ATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPXXXX 930
A+ M LG+A+DGGKDSLSMAA G E V+APGSLVIS Y CPDIT TVTP
Sbjct: 361 CEAMVAVMAALGVAVDGGKDSLSMAARVGTETVRAPGSLVISAYAVCPDITATVTPDLKH 420
Query: 931 -XXXXXXXXXXXAKGKRRLGGSALAQVFDQVGNESPDLEDVPY-LKRVFETVQDLIGDEL 988
+ G+ RLGG+ALAQ F Q+G PDL D+P L R F Q L+ D L
Sbjct: 421 PEGRGHLLYVALSPGQHRLGGTALAQCFSQLGEHPPDL-DLPENLVRAFSITQGLLKDRL 479
Query: 989 VSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDT 1048
+ +GHD+SDGGL+ C LEM+FAGN G+ +D+ + LFAEE GLVLEV + +L
Sbjct: 480 LCSGHDVSDGGLVTCLLEMAFAGNCGLQVDVPVPRVDVLSVLFAEEPGLVLEVQEPDLAQ 539
Query: 1049 VSKKLHDAGVSAEIIGQVNSS--HS-VEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQR 1105
V K+ DAG+ +G + H+ V + V+G L E LR +WEETSF+L++ Q
Sbjct: 540 VLKRYRDAGLHCLELGHTGEAGPHAMVRVSVNGAVVLEEPVGELRALWEETSFQLDRLQA 599
Query: 1106 LASCVESEKEGLKSRCEPLWKLSFT-PSLTDEKYMNATSKPKVAVIREEGSNGDREMSAA 1164
CV E+ GL+ R P + L T P + + S P+VA++REEGSNGDREM+ A
Sbjct: 600 EPRCVAEEERGLRERMGPSYCLPPTFPKASVPREPGGPS-PRVAILREEGSNGDREMADA 658
Query: 1165 FYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224
F+ AGFE WDVTM DL +GAI LD FRG+ FVGGFSYADVL SAKGW+A++ F+ +
Sbjct: 659 FHLAGFEVWDVTMQDLCSGAIGLDTFRGVAFVGGFSYADVLGSAKGWAAAVTFHPRAGAE 718
Query: 1225 FQEFYKRPDTFSLGVCNGCQLMALLGWIXXXXXXXXXXXXXD--PSQPRFV--HNESGRF 1280
+ F KRPDTFSLGVCNGCQL+ALLGW+ D P++P + HN SGR+
Sbjct: 719 LRRFRKRPDTFSLGVCNGCQLLALLGWVGGDPNEDAAEMGPDSQPARPGLLLRHNLSGRY 778
Query: 1281 ECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDD 1340
E R++SV + PA+ML+GMEG+ L VW+AHGEG F + +I LAP+ + DD
Sbjct: 779 ESRWASVRVGPGPALMLRGMEGAVLPVWSAHGEGYVAFSSPELQAQIEARGLAPLHWADD 838
Query: 1341 DGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPS 1400
DGNPTE YP N NGSP GVA ICS DGRHLA+MPHPER WQ+ W P + D S
Sbjct: 839 DGNPTEQYPLNPNGSPGGVAGICSCDGRHLAVMPHPERAVRPWQWAWRPPPF--DTLTTS 896
Query: 1401 PWLKMFQNAREW 1412
PWL++F NAR W
Sbjct: 897 PWLQLFINARNW 908
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P43847 | PUR4_HAEIN | 6, ., 3, ., 5, ., 3 | 0.3868 | 0.8458 | 0.9221 | yes | no |
| Q87RW0 | PUR4_VIBPA | 6, ., 3, ., 5, ., 3 | 0.3805 | 0.8818 | 0.9577 | yes | no |
| Q7MN70 | PUR4_VIBVY | 6, ., 3, ., 5, ., 3 | 0.3748 | 0.8811 | 0.9606 | yes | no |
| Q47XX7 | PUR4_COLP3 | 6, ., 3, ., 5, ., 3 | 0.3669 | 0.9009 | 0.9651 | yes | no |
| P74881 | PUR4_SALTY | 6, ., 3, ., 5, ., 3 | 0.3902 | 0.8486 | 0.9266 | yes | no |
| Q7N1Z4 | PUR4_PHOLL | 6, ., 3, ., 5, ., 3 | 0.3836 | 0.8493 | 0.9274 | yes | no |
| Q886W6 | PUR4_PSESM | 6, ., 3, ., 5, ., 3 | 0.3740 | 0.8939 | 0.9738 | yes | no |
| Q12PR7 | PUR4_SHEDO | 6, ., 3, ., 5, ., 3 | 0.3904 | 0.8493 | 0.9288 | yes | no |
| Q085S1 | PUR4_SHEFN | 6, ., 3, ., 5, ., 3 | 0.3847 | 0.8472 | 0.9265 | yes | no |
| Q9KTN2 | PUR4_VIBCH | 6, ., 3, ., 5, ., 3 | 0.3743 | 0.8967 | 0.9776 | yes | no |
| Q0HKU9 | PUR4_SHESM | 6, ., 3, ., 5, ., 3 | 0.3971 | 0.8451 | 0.9242 | yes | no |
| Q5E749 | PUR4_VIBF1 | 6, ., 3, ., 5, ., 3 | 0.3706 | 0.8939 | 0.9700 | yes | no |
| Q4ZX02 | PUR4_PSEU2 | 6, ., 3, ., 5, ., 3 | 0.3763 | 0.8939 | 0.9738 | yes | no |
| Q0HX47 | PUR4_SHESR | 6, ., 3, ., 5, ., 3 | 0.3872 | 0.8769 | 0.9590 | yes | no |
| Q6D238 | PUR4_ERWCT | 6, ., 3, ., 5, ., 3 | 0.3870 | 0.8465 | 0.9250 | yes | no |
| P35421 | PUR4_DROME | 6, ., 3, ., 5, ., 3 | 0.4689 | 0.9186 | 0.9593 | yes | no |
| Q32D15 | PUR4_SHIDS | 6, ., 3, ., 5, ., 3 | 0.3864 | 0.8472 | 0.9250 | yes | no |
| Q1CKD2 | PUR4_YERPN | 6, ., 3, ., 5, ., 3 | 0.3884 | 0.8458 | 0.9228 | yes | no |
| Q1C5E7 | PUR4_YERPA | 6, ., 3, ., 5, ., 3 | 0.3884 | 0.8458 | 0.9228 | yes | no |
| Q57LE6 | PUR4_SALCH | 6, ., 3, ., 5, ., 3 | 0.3894 | 0.8486 | 0.9266 | yes | no |
| Q48LX3 | PUR4_PSE14 | 6, ., 3, ., 5, ., 3 | 0.3751 | 0.8967 | 0.9768 | yes | no |
| Q0I5H4 | PUR4_HAES1 | 6, ., 3, ., 5, ., 3 | 0.3738 | 0.8988 | 0.9799 | yes | no |
| Q1R8H7 | PUR4_ECOUT | 6, ., 3, ., 5, ., 3 | 0.3865 | 0.8451 | 0.9227 | yes | no |
| Q8DF81 | PUR4_VIBVU | 6, ., 3, ., 5, ., 3 | 0.3748 | 0.8811 | 0.9606 | yes | no |
| Q54JC8 | PUR4_DICDI | 6, ., 3, ., 5, ., 3 | 0.5273 | 0.9200 | 0.9601 | yes | no |
| Q5PIG8 | PUR4_SALPA | 6, ., 3, ., 5, ., 3 | 0.3878 | 0.8486 | 0.9266 | yes | no |
| Q9CLW4 | PUR4_PASMU | 6, ., 3, ., 5, ., 3 | 0.3832 | 0.8465 | 0.9228 | yes | no |
| Q5SUR0 | PUR4_MOUSE | 6, ., 3, ., 5, ., 3 | 0.5160 | 0.9257 | 0.9790 | yes | no |
| Q8ZCQ2 | PUR4_YERPE | 6, ., 3, ., 5, ., 3 | 0.3884 | 0.8458 | 0.9228 | yes | no |
| Q65RJ7 | PUR4_MANSM | 6, ., 3, ., 5, ., 3 | 0.3804 | 0.8705 | 0.9491 | yes | no |
| Q0TET1 | PUR4_ECOL5 | 6, ., 3, ., 5, ., 3 | 0.3865 | 0.8451 | 0.9227 | yes | no |
| Q3KHL4 | PUR4_PSEPF | 6, ., 3, ., 5, ., 3 | 0.3885 | 0.8458 | 0.9214 | yes | no |
| Q8EC57 | PUR4_SHEON | 6, ., 3, ., 5, ., 3 | 0.3984 | 0.8444 | 0.9234 | yes | no |
| O15067 | PUR4_HUMAN | 6, ., 3, ., 5, ., 3 | 0.5186 | 0.9271 | 0.9798 | yes | no |
| Q3IHZ2 | PUR4_PSEHT | 6, ., 3, ., 5, ., 3 | 0.3909 | 0.8479 | 0.9251 | yes | no |
| Q9M8D3 | PUR4_ARATH | 6, ., 3, ., 5, ., 3 | 0.8058 | 0.9872 | 0.9921 | yes | no |
| Q4QME6 | PUR4_HAEI8 | 6, ., 3, ., 5, ., 3 | 0.3868 | 0.8458 | 0.9221 | yes | no |
| Q19311 | PUR4_CAEEL | 6, ., 3, ., 5, ., 3 | 0.4524 | 0.8988 | 0.9599 | yes | no |
| Q31XT0 | PUR4_SHIBS | 6, ., 3, ., 5, ., 3 | 0.3865 | 0.8451 | 0.9227 | yes | no |
| Q1H2I8 | PUR4_METFK | 6, ., 3, ., 5, ., 3 | 0.3874 | 0.8896 | 0.9729 | yes | no |
| Q2SK05 | PUR4_HAHCH | 6, ., 3, ., 5, ., 3 | 0.3685 | 0.8960 | 0.9761 | yes | no |
| Q8FF26 | PUR4_ECOL6 | 6, ., 3, ., 5, ., 3 | 0.3857 | 0.8451 | 0.9227 | yes | no |
| Q9HXN2 | PUR4_PSEAE | 6, ., 3, ., 5, ., 3 | 0.3957 | 0.8479 | 0.9237 | yes | no |
| Q2NS22 | PUR4_SODGM | 6, ., 3, ., 5, ., 3 | 0.3889 | 0.8500 | 0.9281 | yes | no |
| Q3YYZ8 | PUR4_SHISS | 6, ., 3, ., 5, ., 3 | 0.3873 | 0.8451 | 0.9227 | yes | no |
| Q5QWY0 | PUR4_IDILO | 6, ., 3, ., 5, ., 3 | 0.3879 | 0.8741 | 0.9544 | yes | no |
| Q667W1 | PUR4_YERPS | 6, ., 3, ., 5, ., 3 | 0.3884 | 0.8458 | 0.9228 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 6.3.5 | 0.921 |
| 3rd Layer | 6.3.5.3 | 0.914 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1414 | |||
| PLN03206 | 1307 | PLN03206, PLN03206, phosphoribosylformylglycinamid | 0.0 | |
| TIGR01735 | 1310 | TIGR01735, FGAM_synt, phosphoribosylformylglycinam | 0.0 | |
| PRK05297 | 1290 | PRK05297, PRK05297, phosphoribosylformylglycinamid | 0.0 | |
| COG0046 | 743 | COG0046, PurL, Phosphoribosylformylglycinamidine ( | 1e-155 | |
| pfam13507 | 259 | pfam13507, GATase_5, CobB/CobQ-like glutamine amid | 1e-146 | |
| cd02203 | 313 | cd02203, PurL_repeat1, PurL subunit of the formylg | 1e-121 | |
| cd01740 | 238 | cd01740, GATase1_FGAR_AT, Type 1 glutamine amidotr | 1e-104 | |
| PHA03366 | 1304 | PHA03366, PHA03366, FGAM-synthase; Provisional | 1e-101 | |
| TIGR01739 | 1202 | TIGR01739, tegu_FGAM_synt, herpesvirus tegument pr | 7e-96 | |
| cd02204 | 264 | cd02204, PurL_repeat2, PurL subunit of the formylg | 6e-84 | |
| COG0047 | 231 | COG0047, PurL, Phosphoribosylformylglycinamidine ( | 2e-73 | |
| TIGR01857 | 1239 | TIGR01857, FGAM-synthase, phosphoribosylformylglyc | 6e-66 | |
| TIGR01736 | 715 | TIGR01736, FGAM_synth_II, phosphoribosylformylglyc | 5e-52 | |
| cd02193 | 272 | cd02193, PurL, Formylglycinamide ribonucleotide am | 3e-46 | |
| PRK01213 | 724 | PRK01213, PRK01213, phosphoribosylformylglycinamid | 9e-46 | |
| PRK01175 | 261 | PRK01175, PRK01175, phosphoribosylformylglycinamid | 2e-43 | |
| TIGR01737 | 227 | TIGR01737, FGAM_synth_I, phosphoribosylformylglyci | 8e-37 | |
| PRK03619 | 219 | PRK03619, PRK03619, phosphoribosylformylglycinamid | 5e-30 | |
| cd02193 | 272 | cd02193, PurL, Formylglycinamide ribonucleotide am | 3e-25 | |
| pfam02769 | 150 | pfam02769, AIRS_C, AIR synthase related protein, C | 2e-23 | |
| pfam02769 | 150 | pfam02769, AIRS_C, AIR synthase related protein, C | 7e-20 | |
| PRK14090 | 601 | PRK14090, PRK14090, phosphoribosylformylglycinamid | 1e-13 | |
| pfam00586 | 96 | pfam00586, AIRS, AIR synthase related protein, N-t | 2e-08 | |
| cd00396 | 222 | cd00396, PurM-like, AIR (aminoimidazole ribonucleo | 2e-07 | |
| cd01653 | 115 | cd01653, GATase1, Type 1 glutamine amidotransferas | 9e-07 | |
| cd03128 | 92 | cd03128, GAT_1, Type 1 glutamine amidotransferase | 2e-06 | |
| cd00396 | 222 | cd00396, PurM-like, AIR (aminoimidazole ribonucleo | 8e-06 | |
| COG0518 | 198 | COG0518, GuaA, GMP synthase - Glutamine amidotrans | 2e-05 | |
| TIGR04049 | 316 | TIGR04049, AIR_rel_sll0787, AIR synthase-related p | 5e-04 | |
| cd02203 | 313 | cd02203, PurL_repeat1, PurL subunit of the formylg | 0.002 | |
| COG2144 | 324 | COG2144, COG2144, Selenophosphate synthetase-relat | 0.003 |
| >gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
Score = 2738 bits (7099), Expect = 0.0
Identities = 1084/1307 (82%), Positives = 1184/1307 (90%)
Query: 108 AELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLE 167
AELL+ VQ K+SN IV ++TE CFN+GL+S +S +KLE LKWLL+ET+EPENLGTESFLE
Sbjct: 1 AELLRKVQTKVSNDIVSIETEQCFNVGLESPLSAEKLETLKWLLRETFEPENLGTESFLE 60
Query: 168 KKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDN 227
KK +GL AV+VEVGPRLSFTTAWS NAVSIC CGLTEVTRLERSRRYLLFS L ++
Sbjct: 61 AKKSEGLNAVVVEVGPRLSFTTAWSTNAVSICSACGLTEVTRLERSRRYLLFSSSPLDES 120
Query: 228 QINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDE 287
QIN FAAMVHDRMTECVY + LTSFE+ VVPE V VPVME GR ALEEIN+EMGLAFDE
Sbjct: 121 QINAFAAMVHDRMTECVYPQPLTSFESGVVPEPVYTVPVMEEGRAALEEINKEMGLAFDE 180
Query: 288 QDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKS 347
QDL YYTRLF++DIKR+PT VELFDIAQSNSEHSRHWFF+GK+VIDG+PM +TL Q+VK
Sbjct: 181 QDLDYYTRLFRDDIKRDPTNVELFDIAQSNSEHSRHWFFSGKLVIDGQPMPKTLFQMVKD 240
Query: 348 TLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCA 407
TL+ANPNNSVIGFKDNSSAI+GF V+ LRPV PGS L+ +DLD+L TAETHNFPCA
Sbjct: 241 TLKANPNNSVIGFKDNSSAIRGFVVQPLRPVSPGSPSPLAPVDRDLDILLTAETHNFPCA 300
Query: 408 VAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLA 467
VAPYPGAETGAGGRIRDTHATGRGSFVVA TAGYCVGNL +EGSYAPWED SF YPSNLA
Sbjct: 301 VAPYPGAETGAGGRIRDTHATGRGSFVVAGTAGYCVGNLRIEGSYAPWEDSSFVYPSNLA 360
Query: 468 SPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHN 527
SPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLP+G+RREWLKPIMFSGGIGQIDH
Sbjct: 361 SPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPNGERREWLKPIMFSGGIGQIDHT 420
Query: 528 HISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYR 587
H++KGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDA+LDFNAVQRGDAEM+QKLYR
Sbjct: 421 HLTKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMSQKLYR 480
Query: 588 VVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGA 647
VVRAC+EMGE NPI+SIHDQGAGGNCNVVKEIIYPKGAEIDIRA++VGDHTLSVLEIWGA
Sbjct: 481 VVRACVEMGEDNPIVSIHDQGAGGNCNVVKEIIYPKGAEIDIRAVVVGDHTLSVLEIWGA 540
Query: 648 EYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPP 707
EYQEQDA+L+KPESRDLLQSIC+RER SMAVIGTI G GRVVLVDSAA +KC+++GLPPP
Sbjct: 541 EYQEQDALLIKPESRDLLQSICDRERCSMAVIGTIDGSGRVVLVDSAAPEKCEANGLPPP 600
Query: 708 PPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLT 767
PPAVDL+LE+VLGDMPQKTFEF EPLDI PGITVMD+LKRVLRLPSVCSKRFLT
Sbjct: 601 PPAVDLDLEKVLGDMPQKTFEFKRVANKLEPLDIPPGITVMDALKRVLRLPSVCSKRFLT 660
Query: 768 TKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMAR 827
TKVDRCVTGLVAQQQTVGPLQI LADVAVIAQT+T LTGGACAIGEQPIKGL++PKAMAR
Sbjct: 661 TKVDRCVTGLVAQQQTVGPLQIPLADVAVIAQTHTGLTGGACAIGEQPIKGLVDPKAMAR 720
Query: 828 LAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDG 887
LAVGEALTNLVWAKVT+LS VKASGNWMYAAKLDGEGA MYDAA AL +AMIELG+AIDG
Sbjct: 721 LAVGEALTNLVWAKVTALSDVKASGNWMYAAKLDGEGADMYDAAVALRDAMIELGVAIDG 780
Query: 888 GKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRR 947
GKDSLSMAA +GGEVVKAPG+LVIS YVTCPDITKTVTPDLKLGDDG+LLH+DL KGKRR
Sbjct: 781 GKDSLSMAAQAGGEVVKAPGNLVISAYVTCPDITKTVTPDLKLGDDGVLLHVDLGKGKRR 840
Query: 948 LGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEM 1007
LGGSALAQ +DQ+G++ PDL+DV YLK+ FE QDLI L+S GHDISDGGL+V LEM
Sbjct: 841 LGGSALAQAYDQIGDDCPDLDDVAYLKKAFEATQDLIAKRLISAGHDISDGGLVVTLLEM 900
Query: 1008 SFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVN 1067
+FAGN GI +DL S G+S F+TLFAEELGLVLEVS+ NLD V +KL AGV+AE+IGQV
Sbjct: 901 AFAGNCGINVDLPSSGHSAFETLFAEELGLVLEVSRKNLDAVMEKLAAAGVTAEVIGQVT 960
Query: 1068 SSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWKL 1127
+S +E+KVDG T L+EKT+ LRDMWEETSF+LEK QRL SCV EKEGLKSR P WKL
Sbjct: 961 ASPLIEVKVDGATCLSEKTASLRDMWEETSFQLEKLQRLESCVAQEKEGLKSRKAPTWKL 1020
Query: 1128 SFTPSLTDEKYMNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISL 1187
SFTP+ TD+K MNATSKPKVA+IREEGSNGDREM+AAFYAAGFEPWDVTMSDL+NG ISL
Sbjct: 1021 SFTPAFTDKKIMNATSKPKVAIIREEGSNGDREMAAAFYAAGFEPWDVTMSDLLNGRISL 1080
Query: 1188 DEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMA 1247
D+FRGIVFVGGFSYADVLDSAKGW+ SIRFN+PLL QFQEFY RPDTFSLGVCNGCQLMA
Sbjct: 1081 DDFRGIVFVGGFSYADVLDSAKGWAGSIRFNEPLLQQFQEFYNRPDTFSLGVCNGCQLMA 1140
Query: 1248 LLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGV 1307
LLGW+PGPQVGG GAGGDPSQPRFVHNESGRFECRF+SVTIEDSPAIMLKGMEGSTLGV
Sbjct: 1141 LLGWVPGPQVGGGLGAGGDPSQPRFVHNESGRFECRFTSVTIEDSPAIMLKGMEGSTLGV 1200
Query: 1308 WAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDG 1367
WAAHGEGRAYFPD+ VLD +L S+LAPVRYCDDDG PTE YPFN NGSPLG+AA+CSPDG
Sbjct: 1201 WAAHGEGRAYFPDESVLDEVLKSNLAPVRYCDDDGEPTEQYPFNPNGSPLGIAALCSPDG 1260
Query: 1368 RHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS 1414
RHLAMMPHPERCFLMWQ+PWYPK W VD GPSPWLKMFQNAREWC
Sbjct: 1261 RHLAMMPHPERCFLMWQFPWYPKEWGVDPAGPSPWLKMFQNAREWCE 1307
|
Length = 1307 |
| >gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
Score = 1946 bits (5044), Expect = 0.0
Identities = 659/1339 (49%), Positives = 842/1339 (62%), Gaps = 52/1339 (3%)
Query: 96 FYRIPLLQDSAAAELLKSV-QKKISNQIVGLKTEHCFNIGLDSRI--STKKLEVLKWLLQ 152
F R P E L Q K+ G+ E C+ +G +S + ++ L L
Sbjct: 1 FLRGPSALSGFRLEKLLQKLQTKVPELT-GVYAEFCYFVGWESALTADEEEKLQLLLLAG 59
Query: 153 ETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLER 212
EP +S L + ++EVGPRL + WS+ A SI R CGL +V R+ER
Sbjct: 60 SVLEPP----QSPLGRG--------LLEVGPRLGTISPWSSKATSIARNCGLAKVDRIER 107
Query: 213 SRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRF--VPVMENG 270
RRY L L + Q AA++HDRMTE V ++ +FE VPE + + V+ G
Sbjct: 108 GRRYYLSGAHPLSEEQEAQAAALLHDRMTESVLPHEIEAFELFSVPEPLNLTTIDVLGGG 167
Query: 271 RKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKI 330
R ALE+ NQE+GLA DE ++ Y T+ F ++++RNP+ VEL AQ+NSEH RH F
Sbjct: 168 RLALEKANQELGLALDEDEIDYLTKRF-QELQRNPSDVELMMFAQANSEHCRHKIFNADW 226
Query: 331 VIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESS 390
+IDGK ++L Q++KST +ANP N+V +KDNSS I+G V +LRP P
Sbjct: 227 IIDGKKQDKSLFQMIKSTHEANPENTVSAYKDNSSVIEGHKVGRLRPDPPTRPEYRQHQE 286
Query: 391 QDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEG 450
+ +L ETHN P A+AP+PGA TGAGG IRD ATGRG+ A G+CV NLN+ G
Sbjct: 287 DLVHILMKVETHNHPTAIAPFPGASTGAGGEIRDEGATGRGAKPKAGLTGFCVSNLNIPG 346
Query: 451 SYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMR--LPSGQR 508
PWEDP F P +ASPL I+I+A GA+ + N+FG P + GY RTF ++ LP GQ
Sbjct: 347 LEQPWEDP-FQKPERIASPLDIMIEAPLGAAAFNNEFGRPNLLGYFRTFELKASLPGGQV 405
Query: 509 REWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAD 568
R + KPIM +GGIG ID HI KGE + G L++ +GGPA IG+GGGAASSMVSG N AD
Sbjct: 406 RGYHKPIMLAGGIGSIDAEHIQKGEIEPGALLIVLGGPAMLIGLGGGAASSMVSGTNTAD 465
Query: 569 LDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYP--KGAE 626
LDF +VQRG+ EM ++ V+ C ++GE NPIISIHD GAGG N + E+I+ +GA
Sbjct: 466 LDFASVQRGNPEMERRCQEVIDRCWQLGEKNPIISIHDVGAGGLSNALPELIHDGGRGAV 525
Query: 627 IDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEG 686
ID+RA+ + D LS LEIW E QE+ +LV+ E+ ++ +ICERER AV+GT +G+G
Sbjct: 526 IDLRAVPLDDPGLSPLEIWCNESQERYVLLVRAENLEIFTAICERERCPFAVVGTATGDG 585
Query: 687 RVVLVDSAAVQKCQSSGLPPPPP--AVDLELERVLGDMPQKTFEFHHADQAREPLDIAPG 744
R+ LVD V++ P P VDL LE +LG MP+ T +PLDI PG
Sbjct: 586 RLTLVDDTPVRRNGQGDAPSHFPNNPVDLPLEVLLGKMPKMTRFVQRKAPMLQPLDIPPG 645
Query: 745 ITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDL 804
+ + ++L+RVLRLP+V SKRFL T DR V GLVA+ Q VGP Q LADVAV A ++
Sbjct: 646 LDLHEALERVLRLPAVASKRFLITIGDRSVGGLVARDQMVGPWQTPLADVAVTAASFDTY 705
Query: 805 TGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEG 864
TG A AIGE+P K LL+PKA ARLAVGEA+TNL A V LS VK S NWM AA GE
Sbjct: 706 TGEAMAIGERPPKALLDPKASARLAVGEAITNLAAALVGDLSDVKLSANWMAAAGHPGED 765
Query: 865 AAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGG----EVVKAPGSLVISVYVTCPDI 920
AA+YDA A++E LGIAI GKDSLSM + V APGSLVIS + PD+
Sbjct: 766 AALYDAVKAVSELCPALGIAIPVGKDSLSMKTRWQDNGETKSVTAPGSLVISAFAPVPDV 825
Query: 921 TKTVTPDLKL-GDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFET 979
KTVTPDLK D LL +DL GK RLGGSALAQVF Q+G + PDL+D LK F
Sbjct: 826 RKTVTPDLKHDKGDSHLLLVDLGPGKNRLGGSALAQVFGQLGGDCPDLDDPERLKAFFAV 885
Query: 980 VQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVL 1039
+Q L+ + L+ HD SDGGL+ LEM+FAG+ G+ +DL++ G+SLF LF EELG V+
Sbjct: 886 MQGLVAEGLLLAYHDRSDGGLVTTLLEMAFAGHCGLDVDLDALGDSLFAVLFNEELGAVI 945
Query: 1040 EVSKSNLDTVSKKLHDAGVSAEI--IGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETS 1097
+V+K +L V + L AG++A I IG + I V+G T L+EK S LRD+WEETS
Sbjct: 946 QVAKPDLAAVLELLRAAGLTALILGIGTPTGHPMIRISVNGATLLSEKRSELRDIWEETS 1005
Query: 1098 FELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYM---NATSKPKVAVIREEG 1154
F+L++ + C E E EGL+ R P KL T + ++ N KPKVA++RE+G
Sbjct: 1006 FQLQRLRDNPECAEEEFEGLRDRDGPGLKLPLTFDVNEDIAAPFINKGVKPKVAILREQG 1065
Query: 1155 SNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSAS 1214
NGDREM+AAF AGFE WDV MSDL+ G + LDEFRG+ GGFSY DVL + KGW+ S
Sbjct: 1066 VNGDREMAAAFDRAGFEAWDVHMSDLLAGRVHLDEFRGLAACGGFSYGDVLGAGKGWAKS 1125
Query: 1215 IRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMA-LLGWIPGPQVGGVHGAGGDPSQPRFV 1273
I FN L +QFQ F+KRPDTFSLGVCNGCQ+++ LL WIPG + P FV
Sbjct: 1126 ILFNPRLRDQFQAFFKRPDTFSLGVCNGCQMLSNLLEWIPGTENW-----------PHFV 1174
Query: 1274 HNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLA 1333
N S RFE R +SV + +SP+IML+GM GS L V AHGEG A F + + S LA
Sbjct: 1175 RNNSERFEARVASVRVGESPSIMLRGMAGSRLPVAVAHGEGYAAFSSPELQAQADASGLA 1234
Query: 1334 PVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWN 1393
+RY DDDGNPTE YP N NGSP G+A I S DGR MMPHPER F WQ W P++W+
Sbjct: 1235 ALRYIDDDGNPTEAYPLNPNGSPGGIAGITSCDGRVTIMMPHPERVFRAWQNSWRPEDWD 1294
Query: 1394 VDKKGPSPWLKMFQNAREW 1412
D +PWL++F+NAR W
Sbjct: 1295 ED----TPWLRLFRNARNW 1309
|
This model represents a single-molecule form of phosphoribosylformylglycinamidine synthase, also called FGAM synthase, an enzyme of purine de novo biosynthesis. This form is found mostly in eukaryotes and Proteobacteria. In Bacillus subtilis PurL (FGAM synthase II) and PurQ (FGAM synthase I), homologous to different parts of this model, perform the equivalent function; the unrelated small protein PurS is also required and may be a third subunit [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]. Length = 1310 |
| >gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
Score = 1611 bits (4174), Expect = 0.0
Identities = 539/1336 (40%), Positives = 765/1336 (57%), Gaps = 66/1336 (4%)
Query: 95 HFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQET 154
P L +LL +Q + + E+ L + +S ++ L+ LL
Sbjct: 3 ILRGSPALSAFRLQKLLARLQA-AVLPVTSIYAEYVHFADLSAPLSAEEQAKLERLLTYG 61
Query: 155 YEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSR 214
FL V PR + WS+ A I CGL + R+ER
Sbjct: 62 PAEHEPAGRLFL--------------VTPRPGTISPWSSKATDIAHNCGLAGIRRIERGI 107
Query: 215 RYLLFSKGALQDNQINDFAAMVHDRMTECVYT--EKLTSFETSVVPEEVRFVPVMENGRK 272
Y + + AL Q AA++HDRMTE V+ + + + P+ + V V+ GR
Sbjct: 108 AYYV--EAALSAEQRAALAALLHDRMTESVFADLDDAEALFSHHEPKPLTSVDVLGGGRA 165
Query: 273 ALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVI 332
ALE N E+GLA E ++ Y F + + RNPT VEL AQ+NSEH RH F I
Sbjct: 166 ALEAANVELGLALAEDEIDYLVEAFTK-LGRNPTDVELMMFAQANSEHCRHKIFNADWTI 224
Query: 333 DGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQD 392
DG+ ++L +++K+T + NP+ + +KDN++ ++G V + P P + + +
Sbjct: 225 DGEEQPKSLFKMIKNTHETNPDGVLSAYKDNAAVMEGSKVGRFFP-DPDTG-RYGYHQEP 282
Query: 393 LDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSY 452
+L ETHN P A++P+PGA TG+GG IRD ATGRGS A G+ V NL + G
Sbjct: 283 AHILMKVETHNHPTAISPFPGAATGSGGEIRDEGATGRGSKPKAGLTGFSVSNLRIPGFE 342
Query: 453 APWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSG--QRRE 510
PWE+ + P +AS L I+I+ G + + N+FG P + GY RTF ++ S + R
Sbjct: 343 QPWEED-YGKPERIASALDIMIEGPLGGAAFNNEFGRPNLLGYFRTFEQKVNSHNEEVRG 401
Query: 511 WLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLD 570
+ KPIM +GGIG I +H+ KGE +G ++ +GGPA RIG+GGGAASSM SGQ+ DLD
Sbjct: 402 YHKPIMLAGGIGNIRADHVQKGEIPVGAKLIVLGGPAMRIGLGGGAASSMASGQSSEDLD 461
Query: 571 FNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYP--KGAEID 628
F +VQRG+ EM ++ V+ C ++G+ NPI+SIHD GAGG N E++ +G D
Sbjct: 462 FASVQRGNPEMERRCQEVIDRCWQLGDDNPILSIHDVGAGGLSNAFPELVNDGGRGGRFD 521
Query: 629 IRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRV 688
+R I + +S LEIW E QE+ + + PE +L ++ICERER AV+G + E +
Sbjct: 522 LRKIPNDEPGMSPLEIWCNESQERYVLAIAPEDLELFEAICERERCPFAVVGEATEERHL 581
Query: 689 VLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVM 748
L DS K VDL L+ +LG P+ + LD + GI +
Sbjct: 582 TLEDSHFDNK-----------PVDLPLDVLLGKPPKMHRDVKTVKAKGPALDYS-GIDLA 629
Query: 749 DSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGA 808
++++RVLRLP+V SK FL T DR VTGLVA+ Q VGP Q+ +AD AV A +Y G A
Sbjct: 630 EAVERVLRLPTVASKSFLITIGDRSVTGLVARDQMVGPWQVPVADCAVTAASYDGYAGEA 689
Query: 809 CAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMY 868
A+GE+ LL+ A AR+AVGEALTN+ A + L +K S NWM AA GE A +Y
Sbjct: 690 MAMGERTPVALLDAAASARMAVGEALTNIAAAPIGDLKRIKLSANWMAAAGHPGEDARLY 749
Query: 869 DAATALA-EAMIELGIAIDGGKDSLSM-AAYSGG---EVVKAPGSLVISVYVTCPDITKT 923
DA A+ E LGI I GKDSLSM + G + V +P SL+IS + D+ KT
Sbjct: 750 DAVKAVGMELCPALGITIPVGKDSLSMKTKWQEGGEDKEVTSPLSLIISAFAPVEDVRKT 809
Query: 924 VTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDL 983
+TP L+ D LL IDL +GK RLGGSALAQV++Q+G+++PD++D LK F +Q L
Sbjct: 810 LTPQLRTDKDTALLLIDLGRGKNRLGGSALAQVYNQLGDKAPDVDDAEDLKGFFNAIQAL 869
Query: 984 IGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSK 1043
+ + L+ HD SDGGLL EM+FAG+ G+ +DL++ G+ LF EELG V++V
Sbjct: 870 VAEGLLLAYHDRSDGGLLTTLAEMAFAGHCGLDIDLDALGDDALAALFNEELGAVIQVRA 929
Query: 1044 SNLDTVSKKLHDAGVSAE--IIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELE 1101
++ D V L + G+S +IG+ N+ + I +G T +E + LR W ETS++++
Sbjct: 930 ADRDAVEAILAEHGLSDCVHVIGKPNAGDRIVITRNGKTVFSESRTELRRWWSETSYQMQ 989
Query: 1102 KFQRLASCVESEKEGLKSRCEP--LWKLSFTPSL-TDEKYMNATSKPKVAVIREEGSNGD 1158
+ + C + E + + + +P KL+F P+ ++ ++PKVA++RE+G N
Sbjct: 990 RLRDNPECADQEFDAILDQADPGLNVKLTFDPNEDIAAPFIATGARPKVAILREQGVNSH 1049
Query: 1159 REMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFN 1218
EM+AAF AGF+ DV MSDL+ G ++L++F+G+V GGFSY DVL + +GW+ SI FN
Sbjct: 1050 VEMAAAFDRAGFDAIDVHMSDLLAGRVTLEDFKGLVACGGFSYGDVLGAGEGWAKSILFN 1109
Query: 1219 QPLLNQFQEFYKRPDTFSLGVCNGCQLMALLG-WIPGPQVGGVHGAGGDPSQPRFVHNES 1277
L +QF+ F+ RPDTF+LGVCNGCQ+M+ L IPG + PRFV N S
Sbjct: 1110 PRLRDQFEAFFARPDTFALGVCNGCQMMSNLKEIIPGAE-----------HWPRFVRNRS 1158
Query: 1278 GRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRY 1337
+FE RFS V +++SP+I L+GM GS L + AHGEGRA FPD L + L +RY
Sbjct: 1159 EQFEARFSLVEVQESPSIFLQGMAGSRLPIAVAHGEGRAEFPDAH-LAALEAKGLVALRY 1217
Query: 1338 CDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKK 1397
D+ G TE YP N NGSP G+ + + DGR MMPHPER F Q W+P+ W D
Sbjct: 1218 VDNHGQVTETYPANPNGSPNGITGLTTADGRVTIMMPHPERVFRTVQNSWHPEEWGED-- 1275
Query: 1398 GPSPWLKMFQNAREWC 1413
SPW++MF+NAR+W
Sbjct: 1276 --SPWMRMFRNARKWV 1289
|
Length = 1290 |
| >gnl|CDD|223124 COG0046, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Score = 487 bits (1256), Expect = e-155
Identities = 243/843 (28%), Positives = 373/843 (44%), Gaps = 109/843 (12%)
Query: 262 RFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHS 321
V + R+ALE+ N E+GLA + + Y + + + R PT EL AQ SEH
Sbjct: 1 TMVDFLSGSREALEKANTELGLALSDDEYDY---IREFLLGREPTDTELGMFAQMWSEHC 57
Query: 322 RHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPG 381
+ ++L+++ +T + G DN+ +
Sbjct: 58 SYKSS------------KSLLKMFPTT--HTGEYVLSGPGDNAGVV-------------- 89
Query: 382 SRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGY 441
+ V+F E+HN P A+ PY GA TG GG IRD + G + +A
Sbjct: 90 ------DIGDGWAVVFKVESHNHPSAIEPYQGAATGVGGIIRDVLSMG--ARPIALLDSL 141
Query: 442 CVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGM 501
G ++E I+ G + YGN+ G P + G R
Sbjct: 142 RFGIPDIEK------------------TRYIMKGVVAGIAAYGNEIGVPTVGGEFRFD-- 181
Query: 502 RLPSGQRREWLKPIMFSGGIGQIDHNHISKGE-PDIGMLVVKIGGPAYRIGMGGGAASSM 560
P++ +G +G I HI KGE G ++ +GG R G+GG +SM
Sbjct: 182 ------ESYVGNPLVNAGCVGLIRKEHIVKGEAIGPGDKLILLGGKTGRDGIGGATFASM 235
Query: 561 VSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEII 620
G+ + D +VQ GD M ++L + C++ T I I D GAGG + E+
Sbjct: 236 ELGEESEEEDRPSVQVGDPFMEKRLQEAILECVQ---TGLIKGIQDLGAGGLSCAISELA 292
Query: 621 YP--KGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAV 678
GAEID+ + + + +S EIW +E QE+ ++V PE + ICE+ER+ AV
Sbjct: 293 AKGGLGAEIDLDKVPLREPGMSPYEIWLSESQERMLLVVAPEDVEEFLEICEKERLPAAV 352
Query: 679 IGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHAD-QARE 737
+G ++ E R+V+ P VDL ++ + G P+ +
Sbjct: 353 VGEVTDEPRLVVDWKGE-------------PVVDLPIDVLAGKAPKYDRPVKEPKKEEAG 399
Query: 738 PLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVI 797
+ + ++L +VL P+V SK +L + DR V G GP+ AD AV+
Sbjct: 400 DVPEPEEPDLEEALLKVLSSPNVASKEWLYEQYDRSVGGNTVVDP--GPV----ADAAVL 453
Query: 798 AQTYTDLTGGACAI--GEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWM 855
+ TG A+ GE P LL+P A A+LAV EAL NL T + + N
Sbjct: 454 RISEDSGTGKGLAMTTGENPRYALLDPYAGAKLAVAEALRNLA---ATGAKPLALTDNLN 510
Query: 856 YAAKLDGEGAAMYDAATA-LAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVY 914
+ E + AA A LAEA LGI + GG SL + G+ + P + VI
Sbjct: 511 FGNPEKPEVMGQFVAAVAGLAEACRALGIPVVGGNVSLYNE--TNGQPI--PPTPVIGAV 566
Query: 915 VTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLK 974
D+ K +TP+LK + L + K LGGS LAQV+ +G+ P + D+ K
Sbjct: 567 GLVEDVRKVLTPELKKAGLLL---YLLGETKDELGGSELAQVYHGLGDGPPPVVDLAEEK 623
Query: 975 RVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNS-LFQTLFAE 1033
+ F+ ++ LI D V HD+SDGGL V EM+FAG G+ +DL+ G+ L LF+E
Sbjct: 624 KFFDAIRALIADGKVLAAHDVSDGGLAVALAEMAFAGGIGLEIDLDELGDDRLDALLFSE 683
Query: 1034 ELG-LVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDM 1092
LG +++ V++ + + GV ++IG V H + V+ + LR+
Sbjct: 684 SLGRVIVVVAEEEAEVEGAE--AVGVPLKVIGLVGGDHEIGAAVNE-FLVPVSVEELREA 740
Query: 1093 WEE 1095
WE
Sbjct: 741 WEG 743
|
Length = 743 |
| >gnl|CDD|222184 pfam13507, GATase_5, CobB/CobQ-like glutamine amidotransferase domain | Back alignment and domain information |
|---|
Score = 444 bits (1144), Expect = e-146
Identities = 140/271 (51%), Positives = 176/271 (64%), Gaps = 13/271 (4%)
Query: 1144 KPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYAD 1203
+PKVA++RE G+N + EM+AAF AGF+ DV MSDL++G +SLD+F+G+V GGFSY D
Sbjct: 1 RPKVAILREPGTNCEYEMAAAFERAGFDAVDVHMSDLLSGRVSLDDFQGLVAPGGFSYGD 60
Query: 1204 VLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGA 1263
VL S KGW+ SI FN L + F+ F+ R DTFSLG+CNGCQ + LG IPG
Sbjct: 61 VLGSGKGWAKSILFNPKLRDAFEAFFNRRDTFSLGICNGCQALIKLGLIPGG------EI 114
Query: 1264 GGDPSQPRFVHNESGRFECRFSSV-TIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDG 1322
P N+SGRFE R+ +V SP++ LKGMEGS L AHGEGR FPD+
Sbjct: 115 DLAEDWPTLTRNDSGRFESRWVNVKVSPKSPSVFLKGMEGSVL--PVAHGEGRFVFPDEE 172
Query: 1323 VLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLM 1382
VL + + RY D+DGNPT YPFN NGSP G+A ICSPDGRHL +MPHPER F
Sbjct: 173 VLKELEANGQVATRYVDNDGNPTMDYPFNPNGSPYGIAGICSPDGRHLGLMPHPERVFRP 232
Query: 1383 WQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413
WQ+P +P+ SPW ++F+NA W
Sbjct: 233 WQWPHWPREE----GEESPWQRIFRNAVNWF 259
|
This family captures members that are not found in pfam00310, pfam07685 and pfam13230. Length = 259 |
| >gnl|CDD|100034 cd02203, PurL_repeat1, PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat | Back alignment and domain information |
|---|
Score = 379 bits (976), Expect = e-121
Identities = 116/387 (29%), Positives = 165/387 (42%), Gaps = 85/387 (21%)
Query: 309 ELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIK 368
EL AQ SEH RH F K +++ + +V
Sbjct: 1 ELGMFAQMWSEHCRHKSF--------KSLLKMIWAVV----------------------- 29
Query: 369 GFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHAT 428
F ETHN P A+ P+ GA TG GG IRD +
Sbjct: 30 ----------------------------FKVETHNHPSAIEPFGGAATGVGGIIRDILSM 61
Query: 429 GRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFG 488
G+ +A G G+L++ G P SP +IL G SDYGN G
Sbjct: 62 --GARPIALLDGLRFGDLDIPG----------YEPKGKLSPRRILDGVVAGISDYGNCIG 109
Query: 489 EPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKG-EPDIGMLVVKIGGPA 547
P + G R + P++ G +G + +HI K P G LVV +GG
Sbjct: 110 IPTVGGEVRFDPSY--------YGNPLVNVGCVGIVPKDHIVKSKAPGPGDLVVLVGGRT 161
Query: 548 YRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQ 607
R G+GG SS +N ++LD AVQ GD M +KL + ET I+ I D
Sbjct: 162 GRDGIGGATFSSKELSENSSELDRPAVQVGDPFMEKKLQEAILEAR---ETGLIVGIQDL 218
Query: 608 GAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLL 665
GAGG + V E+ GAEID+ + + + +S EIW +E QE+ ++V PE +
Sbjct: 219 GAGGLSSAVSEMAAKGGLGAEIDLDKVPLREPGMSPWEIWISESQERMLLVVPPEDLEEF 278
Query: 666 QSICERERVSMAVIGTISGEGRVVLVD 692
+IC++E + AVIG ++ +GR+ L
Sbjct: 279 LAICKKEDLEAAVIGEVTDDGRLRLYY 305
|
FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM. Length = 313 |
| >gnl|CDD|153211 cd01740, GATase1_FGAR_AT, Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase | Back alignment and domain information |
|---|
Score = 330 bits (848), Expect = e-104
Identities = 104/265 (39%), Positives = 141/265 (53%), Gaps = 28/265 (10%)
Query: 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLD 1206
VAV+R GSN DR+M+ AF AGFE DV +DL+ G LD++ G+V GGFSY D L
Sbjct: 1 VAVLRFPGSNCDRDMAYAFELAGFEAEDVWHNDLLAGRKDLDDYDGVVLPGGFSYGDYLR 60
Query: 1207 SAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGD 1266
+ +AS PLL + + + LG+CNG Q++ LG +PG +
Sbjct: 61 AGAIAAAS-----PLLMEEVKEFAERGGLVLGICNGFQILVELGLLPGALIRNKG----- 110
Query: 1267 PSQPRFVHNESGRFECRFSSVTIEDSPAIMLKG-MEGSTLGVWAAHGEGRAYFPDDGVLD 1325
+F+ RF ++ +E++ + KG MEG L + AHGEGR Y D+ + +
Sbjct: 111 ---LKFICRWQ----NRFVTLRVENNDSPFTKGYMEGEVLRIPVAHGEGRFYADDETLAE 163
Query: 1326 RILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQY 1385
+ +A +Y DDDGN TE YP N NGS G+A IC+ DGR L MMPHPER WQ
Sbjct: 164 LEENGQIA--QYVDDDGNVTERYPANPNGSLDGIAGICNEDGRVLGMMPHPERAVEPWQ- 220
Query: 1386 PWYPKNWNVDKKGPSPWLKMFQNAR 1410
G S LK+F+NA
Sbjct: 221 -------WERLLGGSDGLKLFRNAV 238
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase (FGAR-AT). FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, Pi, and glutamate in the fourth step of the purine biosynthetic pathway. FGAR-AT is a glutamine amidotransferase. Glutamine amidotransferase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. FGAR-AT belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. Length = 238 |
| >gnl|CDD|223058 PHA03366, PHA03366, FGAM-synthase; Provisional | Back alignment and domain information |
|---|
Score = 351 bits (903), Expect = e-101
Identities = 222/732 (30%), Positives = 323/732 (44%), Gaps = 91/732 (12%)
Query: 749 DSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIA---------- 798
+L ++L P+V SK ++ +DRC G VAQQ VGPL + ++D +++
Sbjct: 592 STLLQILSHPTVGSKEYIVRHIDRCGNGRVAQQPGVGPLDLPVSDYSIVVHSSVKTRRAI 651
Query: 799 -----------QTYTDLTG-------------------GAC-AIGEQPIKGLLNPKAMAR 827
Q +L G C A+GEQ K L+P A+
Sbjct: 652 ETPSSTEDLTYQEADELINSPLTWFDPDDESVLHPAVPGTCSALGEQGYKVQLDPILGAK 711
Query: 828 LAVGEALTNLVWAKVTSLSHV--KASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAI 885
A+ EALTNL+ A V +L + S W D + +Y A A E ELG+
Sbjct: 712 YAIVEALTNLMLAPVANLEDITITLSVTWPPT---DQAASELYRALAACKEFCRELGVNF 768
Query: 886 DGGKDSLSMAAYSGGEVVKAPG-----SLVISVYVTCPDITKTVTPDLKLGDDGILLHID 940
+ + A+ S + ++V + P T +TPDLK L+H+
Sbjct: 769 -----TFTSASSSPRQDQPPQPGPLFNTIVFTASAPVPSSTPRLTPDLK-KPGSALVHLS 822
Query: 941 LAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGL 1000
++ L GS Q+F PD+ YLK +F VQ LI + LV +GHD+SDGGL
Sbjct: 823 ISPEYT-LAGSVFEQIFGLKSGTLPDI-SPSYLKNLFRAVQHLISEGLVVSGHDVSDGGL 880
Query: 1001 LVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSA 1060
+ C EM+ AG G+T+ + + + L LF+E G+V+EV S+L V +L +
Sbjct: 881 IACLAEMALAGGRGVTITVPAGEDPLQF-LFSETPGVVIEVPPSHLSAVLTRLRSRNIIC 939
Query: 1061 EIIGQVNSS---HSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGL 1117
IG V S ++ + +G E S LR W SF E+F+ L + E
Sbjct: 940 YPIGTVGPSGPSNTFSVSHNGTVLFRESLSSLRSTW--RSFSDEQFELLRPDLTEESMYR 997
Query: 1118 KS--RCEPLWKLSFTPSLTDEKYM--NATSKPKVAVIREEGSNGDREMSAAFYAAGFEPW 1173
K E T + + +VAV+ G G + AAF AGF+P+
Sbjct: 998 KDYGNNEVDLGPLEEGLTTSPLRLYTCPDKRHRVAVLLLPGCPGPHALLAAFTNAGFDPY 1057
Query: 1174 DVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPD 1233
V++ +L +G LDEF G+V G D A+ A++ N + + F RPD
Sbjct: 1058 PVSIEELKDGT-FLDEFSGLVIGGSSGAEDSYTGARAAVAALLSNPAVRDALLRFLNRPD 1116
Query: 1234 TFSLGVCN-GCQLMA---LLGWIPGPQVGGVHGAGGDPSQP-RFVHNESGRFECRFSSVT 1288
TFSLG GCQ++ +G V G + P N SG +E R+ +
Sbjct: 1117 TFSLGCGELGCQILFALKAVGSTAPSPVPGTE---TEEQWPITLEPNASGLYESRWLNFY 1173
Query: 1289 I-EDSPAIMLKGMEGSTLGVWAAHGE--GRAYFPDDGVLDRILHSHLAPVRYCD---DDG 1342
I E + ++ L+ + GS L W A G G Y P+DG+ + +S + D G
Sbjct: 1174 IPETTKSVALRPLRGSVLPCW-AQGTHLGFRY-PNDGMEYILRNSGQIAATFHGADVDPG 1231
Query: 1343 NPTEVYPFNVNG-SPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSP 1401
NP YP N G S VA +CS DGRHLA++ P F WQ+ P N K SP
Sbjct: 1232 NPARHYPRNPTGNSN--VAGLCSADGRHLALLFDPSLSFHPWQWQHVPPE-NGPLKV-SP 1287
Query: 1402 WLKMFQNAREWC 1413
W MFQ+ WC
Sbjct: 1288 WKLMFQDLHLWC 1299
|
Length = 1304 |
| >gnl|CDD|233554 TIGR01739, tegu_FGAM_synt, herpesvirus tegument protein/v-FGAM-synthase | Back alignment and domain information |
|---|
Score = 335 bits (862), Expect = 7e-96
Identities = 246/1031 (23%), Positives = 393/1031 (38%), Gaps = 172/1031 (16%)
Query: 488 GEPLIQGYTRT---FGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIG 544
G P G+ R + LP+ P + + ++ H I+ + G +V +G
Sbjct: 237 GVPTCGGFIRLISKNKLSLPTPYT-----PTYNTSILDRLCHVTINTADEPPGQDIVALG 291
Query: 545 GPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVR-ACIEMGETNPIIS 603
+ S LD N + L V+ CI + S
Sbjct: 292 QFEPSLLPDTPPLLYADSP-----LDVNKILT----ALALLTDDVKTPCI-------VGS 335
Query: 604 IHDQGAGGNCNVVK---EIIYPKGAEIDIRAI---------------------IVGDHTL 639
I G C+V + ++ P GAE+D+ + +V + L
Sbjct: 336 IRPLG---PCSVKEHLTALLPPCGAELDLSNLPDEVVAALARSSPANRVENEKMVKQYFL 392
Query: 640 SVL----------EIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVV 689
+V+ + + + L++ C + V+G + +
Sbjct: 393 NVVCSVVFLTVKNTPHNTGTEGVTPL-------ERLKTACRMFGCPVKVLGKLVPLPGLH 445
Query: 690 LVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFH-----HADQAREPLDIAPG 744
+V P P + T P+ +
Sbjct: 446 IVSDLF---------NPVPTYPTFDF-----TSFTPTSPLLPLGGPEPVSRTRPMFLDES 491
Query: 745 I-----TVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIA- 798
+ + ++ ++L P+V SK F+ +DRC G VAQQQ VGPL + ++D +++
Sbjct: 492 LNWQTLNLRSTILKILSHPTVGSKEFIVRHIDRCGNGRVAQQQGVGPLDLPVSDYSLVLH 551
Query: 799 ----------QTYTDL-------------------------TGGACAIGEQPIKGLLNPK 823
TY++ + A+GEQ K +PK
Sbjct: 552 NLSRPTDTTEVTYSENAMDLILDPDSWLYSWENEVLENPALSCVCSALGEQTYKVQADPK 611
Query: 824 AMARLAVGEALTNLVWAKVTSLSHV--KASGNWMYAAKLDGEGAAMYDAATALAEAMIEL 881
A A+ EAL NL + +L V S W D + + DA A + EL
Sbjct: 612 RGATYAITEALLNLSLSPWNTLEDVIITLSVTWSPT---DHVYSLLKDALRACKDFCEEL 668
Query: 882 GIAIDGGKDSLSMAAYSGGEVVKAPG--SLVISVYVTCPDITKTVTPDLKLGDDGILLHI 939
G++ +++ AA S + + S+V S K +TPDLK L+ +
Sbjct: 669 GVSF-----TVTSAASSPTQDSGSAPFMSIVFSASCPVLLSAKKITPDLKS-HGSHLIWL 722
Query: 940 DLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGG 999
L L GS Q+ P L LK++ +Q L+ + ++ +GHD+SDGG
Sbjct: 723 SLHPSYT-LAGSIFEQILGLSFIRLPAL-SPVSLKKLLSALQTLVKEGVIVSGHDVSDGG 780
Query: 1000 LLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVS 1059
L+ C EM+ +G G+ + L G + L +E G+V+EV S++ V + L G+
Sbjct: 781 LVACVAEMALSGGKGVRITL-PHGTDPLEFLCSETPGVVIEVDPSSMYAVLQFLRSEGLV 839
Query: 1060 AEIIGQVNS---SHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASC-VESEKE 1115
++IG+V S + + + E SLL+ W SF E+ L E
Sbjct: 840 FQVIGRVGESGPSPTFSVVHNSTVLFQEPLSLLQGTWR--SFSDEENTLLCPNLEPREMH 897
Query: 1116 GLKSRC-EPLWKLSFTPSLTDEKYMNATSKP--KVAVIREEGSNGDREMSAAFYAAGFEP 1172
L E + P +VAV+ G + + AA AGF+P
Sbjct: 898 VLDYGYNEMDFGGVPKGLPLSPLRFFTCPDPRHQVAVLLLPGQSVPHGLLAALTNAGFDP 957
Query: 1173 WDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRP 1232
V++++L LD F G++ G D A+ +A++ NQ L F RP
Sbjct: 958 RIVSITELKKTD-FLDTFSGLIIGGASGTLDSEVGARALAAALLRNQAFLRDLLTFLNRP 1016
Query: 1233 DTFSLGVCN-GCQLMA---LLGWIPGPQVGGVHGAGGDPSQP-RFVHNESGRFECRFSSV 1287
DTFSLG GCQL+ ++G+ V + +P R N SG +E R+ +
Sbjct: 1017 DTFSLGFGELGCQLLLALNIVGYTQSSPFITVP---TEVQEPPRLEKNASGLYESRWLNF 1073
Query: 1288 TI-EDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCD---DDGN 1343
I E + ++ L+ + GS L WA Y PDDGV + + +S + G
Sbjct: 1074 YIPETTKSVFLRPLRGSVLPCWAQGTHLGLYHPDDGVEEELENSGQIASTFHGNSPSSGL 1133
Query: 1344 PTEVYPFNVNG-SPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPW 1402
P YP N +G S VA +CS DGRHLA++ P F WQ+ P N N + SPW
Sbjct: 1134 PATNYPRNPSGGSN--VAGLCSADGRHLALLIDPSLSFFPWQWQHVPPN-NPPLQ-VSPW 1189
Query: 1403 LKMFQNAREWC 1413
MFQ W
Sbjct: 1190 KLMFQRLHLWS 1200
|
This model describes a family of large proteins of herpesvirues. The protein is described variably as tegument protein or phosphoribosylformylglycinamidine synthase (FGAM-synthase). Most of the length of the protein shows homology to eukaryotic FGAM-synthase. Functional characterizations were not verified during construction of this model. Length = 1202 |
| >gnl|CDD|100035 cd02204, PurL_repeat2, PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat | Back alignment and domain information |
|---|
Score = 275 bits (705), Expect = 6e-84
Identities = 100/274 (36%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
Query: 793 DVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASG 852
D AV+ G A + GE P LL+P A A LAV EA+ NLV L +
Sbjct: 1 DAAVLRIPGETDKGLAMSTGENPRYSLLDPYAGAALAVAEAVRNLVAVGADPL-AITDCL 59
Query: 853 NWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVIS 912
N+ K +GE + +A L +A LG + GGKDSL E V P +LVI
Sbjct: 60 NFGNPEKPEGEMGQLVEAVLGLGDACRALGTPVIGGKDSLYNET----EGVAIPPTLVIG 115
Query: 913 VYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPY 972
D+ K VT D K D + L I K + ALA + +G +P L D+
Sbjct: 116 AVGVVDDVRKIVTLDFKKEGDLLYL-IGETKDELGGSEYALA--YHGLGGGAPPLVDLER 172
Query: 973 LKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFA 1032
K +F+ VQ+LI + LV + HD+SDGGL V EM+FAG G +DL+ + LF+
Sbjct: 173 EKALFDAVQELIKEGLVLSAHDVSDGGLAVALAEMAFAGGLGAEVDLSKDDAEDE-LLFS 231
Query: 1033 EELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQV 1066
E LG VL K + V + +AGV A +IG V
Sbjct: 232 ESLGRVLVEVKPENEEVF-EAEEAGVPATVIGTV 264
|
FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM. Length = 264 |
| >gnl|CDD|223125 COG0047, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Score = 244 bits (624), Expect = 2e-73
Identities = 97/271 (35%), Positives = 138/271 (50%), Gaps = 43/271 (15%)
Query: 1144 KPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYAD 1203
+PKVAV+R G+N D +M+AAF AGFE DV SDL+ G +F G+V GGFSY D
Sbjct: 2 RPKVAVLRFPGTNCDYDMAAAFERAGFEAEDVWHSDLLLG----RDFDGVVLPGGFSYGD 57
Query: 1204 VLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGA 1263
L + G A+I P++++ +EF ++ LG+CNG Q+++ G +PG
Sbjct: 58 YLRA--GAIAAI---APVMDEVREFAEK-GKPVLGICNGFQILSEAGLLPG--------- 102
Query: 1264 GGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGME-GSTLGVWAAHGEGRAYFPDDG 1322
NES RFECR+ + +E++ G E G + + AHGEGR Y DD
Sbjct: 103 -------ALTRNESLRFECRWVYLRVENNNTPFTSGYEGGEVIPIPVAHGEGRYYA-DDE 154
Query: 1323 VLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLM 1382
L + + RY D++G E N NGS G+A I + DG L MMPHPER
Sbjct: 155 TLAELEENGQVVFRYVDNNGETEEYA--NPNGSVNGIAGITNEDGNVLGMMPHPERAS-- 210
Query: 1383 WQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413
D L++F++AR++
Sbjct: 211 --ESLLG---GED------GLRLFRSARKYL 230
|
Length = 231 |
| >gnl|CDD|130916 TIGR01857, FGAM-synthase, phosphoribosylformylglycinamidine synthase, clade II | Back alignment and domain information |
|---|
Score = 245 bits (626), Expect = 6e-66
Identities = 283/1178 (24%), Positives = 455/1178 (38%), Gaps = 210/1178 (17%)
Query: 273 ALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKI-- 330
L + E GLA +DL++ FK I RNPT E+ + S+H RH F ++
Sbjct: 175 DLAKFKAEQGLAMSLEDLKFIQDYFKS-IGRNPTETEIKVLDTYWSDHCRHTTFETELKH 233
Query: 331 -VID----GKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQ 385
K + + + + + + D ++ K LR + G
Sbjct: 234 VTFSDSKFQKQLKKAYEDYLAMREELGRSEKPVTLMDMATIF----AKYLR--KNGKLDD 287
Query: 386 LSESSQ--------DLDV---------LFTAETHNFPCAVAPYPGAETGAGGRIRDTHAT 428
L S + ++DV +F ETHN P + P+ GA T GG IRD +
Sbjct: 288 LEVSEEINACSVEIEVDVDGVKEPWLLMFKNETHNHPTEIEPFGGAATCIGGAIRDP-LS 346
Query: 429 GRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPL---QILIDASNGASDYGN 485
GR Y + V G+ DP+ L L +I A++G S YGN
Sbjct: 347 GRS---------YVYQAMRVTGA----GDPTVPISETLKGKLPQRKITTTAAHGYSSYGN 393
Query: 486 KFGEPLIQGYTRTFGMRLPSGQRREWLKP-----IMFSGG-IGQIDHNHISKGEPDIGML 539
+ G L +GQ E P M G + ++ + +P+ G +
Sbjct: 394 QIG--------------LATGQVSEIYHPGYVAKRMEVGAVVAATPKENVVREKPEPGDV 439
Query: 540 VVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETN 599
++ +GG R G+GG SS +L VQ+G+A +K+ R+ R G
Sbjct: 440 IILLGGKTGRDGIGGATGSSKEHTVESLELCGAEVQKGNAPEERKIQRLFRN----GNVT 495
Query: 600 PIIS-IHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVK 658
+I +D GAGG + E+ G EID+ + L+ E+ +E QE+ AV+V
Sbjct: 496 RLIKKCNDFGAGGVSVAIGEL--ADGLEIDLNKVPKKYEGLNGTELAISESQERMAVVVS 553
Query: 659 PESRDLLQSICERERVSMAVIGTISGEGRVVL--------------VDSAAVQKCQSSGL 704
PE D + C E + V+ T++ + R+V+ +D+ V++
Sbjct: 554 PEDVDAFLAYCNEENLEATVVATVTEKPRLVMNWNGKTIVDLSRRFLDTNGVRQ------ 607
Query: 705 PPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKR 764
+D ++ +P++ + + L +VL +V S++
Sbjct: 608 -----VIDAKVVDKDVKLPEERQKTSAETLEEDWL-------------KVLSDLNVASQK 649
Query: 765 FLTTKVDRCVTGLVAQQQTVGPLQITLADVAVI---AQTYTDLTGGACAIGEQPIKGLLN 821
L + D V G Q+T + +V T A A G P +
Sbjct: 650 GLQERFDSSVGAGTVLMPLGGKYQLTPTEASVAKLPVLGGETHTASAIAWGFNPYIAEWS 709
Query: 822 PKAMARLAVGEALTNLVWAKVTSLSHVKASGNWM-YAAKLDGEGAAMYDAATAL---AEA 877
P A AV E+L LV A + KA ++ Y KLD + AL +A
Sbjct: 710 PYHGAAYAVIESLAKLVAAGA---DYKKARLSFQEYFEKLDKDAERWGKPFAALLGAIKA 766
Query: 878 MIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILL 937
I+LG+ GGKDS+S E + P +L IS VT + + ++P+ K + I L
Sbjct: 767 QIDLGLPAIGGKDSMS----GTFEELTVPPTL-ISFAVTTANSRRVISPEFKAAGENIYL 821
Query: 938 HIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISD 997
+ G AL + + D + LK F +++LI D V + +
Sbjct: 822 ----------IPGQALE-------DGTIDFDL---LKENFAQIEELIADHKVVSASAVKY 861
Query: 998 GGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELG-LVLEVSKSNLDTVSKKLHDA 1056
GG+ +M+F G L+ N + LF + G + E + +
Sbjct: 862 GGVAESLAKMTFGNRIGAELN-----NPELEDLFTAQYGSFIFESPEEL----------S 906
Query: 1057 GVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFEL--EKFQRLASCVESEK 1114
+ E IGQ + +KV+G E+ L WE E+ KF+ VE
Sbjct: 907 IANVEKIGQTTADF--VLKVNGEKLDLEE---LESAWEGKLEEVFPSKFEDKKETVE--- 958
Query: 1115 EGLKSRCEPLWKLSFTPSLTDEKYMNATS----KPKVAVIREEGSNGDREMSAAFYAAGF 1170
P++ EK + KP+V + G+N + + + AF G
Sbjct: 959 ---------------VPAVASEKKVIKAKEKVEKPRVVIPVFPGTNSEYDSAKAFEKEGA 1003
Query: 1171 EPWDVTMSDLINGAIS---------LDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPL 1221
E V +L A+ +D+ + ++ GGFS D D + + A+I N +
Sbjct: 1004 EVNLVIFRNLNEEALVESVETMVDEIDKSQILMLPGGFSAGDEPDGSAKFIAAILRNPKV 1063
Query: 1222 LNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFE 1281
F R D LG+CNG Q + G +P + + P +N+ R
Sbjct: 1064 RVAIDSFLAR-DGLILGICNGFQALVKSGLLPYGNIEAANET-----SPTLTYNDINRHV 1117
Query: 1282 CRFSSVTIEDSPAIMLKGME-GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDD 1340
+ I + + L G+ G + +HGEGR D VL + + +Y D
Sbjct: 1118 SKIVRTRIASTNSPWLSGVSVGDIHAIPVSHGEGRFVASD-EVLAELRENGQIATQYVDF 1176
Query: 1341 DGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPER 1378
+G P+ +N NGS L + I SPDGR M H ER
Sbjct: 1177 NGKPSMDSKYNPNGSSLAIEGITSPDGRIFGKMGHSER 1214
|
This model represents a single-molecule form of phosphoribosylformylglycinamidine synthase, also called FGAM synthase, an enzyme of purine de novo biosynthesis. This model represents a second clade of these enzymes found in Clostridia, Bifidobacteria and Streptococcus species. This enzyme performs the fourth step in IMP biosynthesis (the precursor of all purines) from PRPP [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]. Length = 1239 |
| >gnl|CDD|233552 TIGR01736, FGAM_synth_II, phosphoribosylformylglycinamidine synthase II | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 5e-52
Identities = 198/819 (24%), Positives = 315/819 (38%), Gaps = 136/819 (16%)
Query: 296 LFKEDIKRNPTTVELFDIAQSNSEH-----SRHWFFTGKIVIDGKPMVRTLMQIVKSTLQ 350
L +E + R P EL + SEH S+ + G
Sbjct: 8 LIREILGREPNDTELAMFSAMWSEHCSYKSSKKLL--KQFPTKGP--------------- 50
Query: 351 ANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAP 410
N + G +++ + + V+F E+HN P A+ P
Sbjct: 51 ----NVIQGPGEDAGVV--------------------DIGDGYAVVFKMESHNHPSAIEP 86
Query: 411 YPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPL 470
Y GA TG GG +RD + G + +A G L + +
Sbjct: 87 YNGAATGVGGILRDILSMG--ARPIALLDSLRFGPL--DDPKNRY--------------- 127
Query: 471 QILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHIS 530
+ G SDYGN+ G P + G F P++ +G + + I
Sbjct: 128 -LFEGVVAGISDYGNRIGVPTVGGEV-EFDESYNG-------NPLVNVMCVGLVRKDDIV 178
Query: 531 KGEPD-IGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVV 589
G+ G +V +GG R G+GG +S + + D AVQ GD + L +
Sbjct: 179 TGKAKGPGNKLVLVGGKTGRDGIGGATFASEELSEEAEEEDRPAVQVGDPFTEKLL---I 235
Query: 590 RACIEMGETNPIISIHDQGAGGNCNVVKEIIYPK--GAEIDIRAIIVGDHTLSVLEIWGA 647
A +E +T + I D GA G + E+ GAEI + + + + ++ EI +
Sbjct: 236 EATLEAVDTGLVKGIKDLGAAGLTSASSEMAAKGGLGAEIYLDKVPLREPGMTPYEIMLS 295
Query: 648 EYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPP 707
E QE+ ++V PE + + I E+ + +VIG ++ EGR+ L V
Sbjct: 296 ESQERMLLVVAPEDVEEVLEIFEKYELPASVIGEVTDEGRIRLYYKGEV----------- 344
Query: 708 PPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLT 767
DL +E +L D P+ E + P + D+ +VL P++ SK ++
Sbjct: 345 --VADLPIE-LLADAPEYERPSEPPKYPEEEKEPEPPADLEDAFLKVLSSPNIASKEWVY 401
Query: 768 TKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMAR 827
+ D V Q +TV D AV+ T G A P L+P A A
Sbjct: 402 RQYDHEV-----QTRTV---VKPGEDAAVLRIKETGKLGLALTADCNPRYVYLDPYAGAA 453
Query: 828 LAVGEALTNLVWAKVTSLSHVKA--SGN-------WMYAAKLDGEGAAMYDAATALAEAM 878
AV EA NL L+ V GN W + + G L +A
Sbjct: 454 GAVAEAYRNLAAVGAEPLAAVDCLNFGNPERPEVYWQFVEAVKG-----------LGDAC 502
Query: 879 IELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLH 938
LG + GG SL +G + P ++ + D+ K +T + K D I L
Sbjct: 503 RALGTPVVGGNVSL-YNETNGVPIAPTPTIGMVGLV---EDVEKLLTSNFKKEGDAIYL- 557
Query: 939 IDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDG 998
+ + K LGGS +V + + D+ K + + V++ I LVS HD+S G
Sbjct: 558 --IGETKDELGGSEYLRVIHGIVSGQVPAVDLEEEKELADAVREAIRAGLVSAAHDVSRG 615
Query: 999 GLLVCTLEMSFAGNYGITLDLNSEGNSL-FQTLFAEELG-LVLEVSKSNLDTVSKKLHDA 1056
GL V EM+ A G +D++ ++ + LF+E G ++ V + + K
Sbjct: 616 GLAVALAEMAAASGIGAEVDIDEIASARPDELLFSESNGRAIVAVPEEKAEEAVKSK--- 672
Query: 1057 GVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEE 1095
GV A++IG+ + IK ++ LRD WEE
Sbjct: 673 GVPAKVIGKTGGD-RLTIKTGD-DTISVSVKELRDAWEE 709
|
Phosphoribosylformylglycinamidine synthase is a single, long polypeptide in most Proteobacteria and eukarotes. Three proteins are required in Bacillus subtilis and many other species. This is the longest of the three and is designated PurL, phosphoribosylformylglycinamidine synthase II, or FGAM synthase II [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]. Length = 715 |
| >gnl|CDD|100029 cd02193, PurL, Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway | Back alignment and domain information |
|---|
Score = 167 bits (424), Expect = 3e-46
Identities = 71/292 (24%), Positives = 118/292 (40%), Gaps = 30/292 (10%)
Query: 395 VLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAP 454
E HN P A+ P GA TG GG IRD ATG + +A +A + +
Sbjct: 3 EAMKIEEHNHPAAIDPAAGAATGVGGAIRDIAATGIDAKPIALSANWMASAGHP------ 56
Query: 455 WEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSG---QRREW 511
IL DA G ++ N+ G P+ G R QR
Sbjct: 57 -------------GEDAILYDAVKGVAELCNQLGLPIPVGKDRMSMKTRWQEGNEQREMT 103
Query: 512 LKPIMFSGGIGQIDHNHISK-GEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLD 570
P + G++ + + G ++ IGG G+GG A +S+ + L
Sbjct: 104 HPPSLVISAFGRVRDDRHTLPQLSTEGNALLLIGGGKGHNGLGGTALASV--ALSYRQLG 161
Query: 571 FNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYP--KGAEID 628
+ Q D + Y ++A + G +++ HD+GAGG + E+++ G ++D
Sbjct: 162 DKSAQVRDPAQEKGFYEAMQALVAAG---KLLAWHDRGAGGLLVALAELVFAGHCGVQVD 218
Query: 629 IRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIG 680
+ A+ + + LEI E QE+ + V+ E RD ++ + V+G
Sbjct: 219 LAALGDDEPDMEPLEIALFESQERGVIQVRAEDRDAVEEAQYGLADCVHVLG 270
|
In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM. Length = 272 |
| >gnl|CDD|234921 PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
Score = 177 bits (451), Expect = 9e-46
Identities = 201/773 (26%), Positives = 301/773 (38%), Gaps = 209/773 (27%)
Query: 395 VLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATG-R----------GSF---------- 433
V+F E+HN P AV PY GA TG GG +RD + G R G
Sbjct: 83 VVFKIESHNHPSAVEPYQGAATGVGGILRDIFSMGARPIALLDSLRFGELDHPKTRYLLE 142
Query: 434 -VVASTAGY--CVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEP 490
VVA GY C+G V G + D S+ L++A
Sbjct: 143 GVVAGIGGYGNCIGVPTVGGEV--YFDESYNG--------NPLVNA-------------- 178
Query: 491 LIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPD-IGMLVVKIGGPAYR 549
+G + H+ I + +G VV +G R
Sbjct: 179 ----------------------------MCVGLVRHDDIVLAKASGVGNPVVYVGAKTGR 210
Query: 550 IGMGGGA-ASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQG 608
G+GG + AS+ +S +++ AVQ GD M + L + AC+E+ +T ++ I D G
Sbjct: 211 DGIGGASFASAELSEESEEKR--PAVQVGDPFMEKLL---IEACLELIKTGLVVGIQDMG 265
Query: 609 AGG----------NCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVK 658
A G + G E+D+ + + + ++ EI +E QE+ ++VK
Sbjct: 266 AAGLTCSSSEMAAKGGL--------GIELDLDKVPLREEGMTPYEIMLSESQERMLLVVK 317
Query: 659 PESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERV 718
P + + +I E+ + AVIG ++ +GR+ + V D+ E +
Sbjct: 318 PGKEEEVLAIFEKWDLDAAVIGEVTDDGRLRVYHHGEV-------------VADVPAEAL 364
Query: 719 LGDMPQKTFEFHHADQAREPLDI--APGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTG 776
+ P + + LD A + ++L ++L P++ SK ++ + D V
Sbjct: 365 ADEAP----VYDRPYKEPAYLDELQADPEDLKEALLKLLSSPNIASKEWVYEQYDHEV-- 418
Query: 777 LVAQQQTVGPLQITLADVAVI---------AQTYTDLTGGACAIGEQPIKGLLNPKAMAR 827
Q TV D AV+ A T TD L+P A+
Sbjct: 419 ---QTNTV---VKPGGDAAVLRIRGGGKGLALT-TDCNPRYVY---------LDPYEGAK 462
Query: 828 LAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYD------------------ 869
LAV EA NL A G A+ D
Sbjct: 463 LAVAEAARNLA-----------AVG---------ATPLAITDCLNFGNPEKPEVMWQFVE 502
Query: 870 AATALAEAMIELGIAIDGGKDSLSMAAY--SGGEVVKAPGSLVISVYVTCPDITKTVTPD 927
A LA+A LG + GG SL Y +GG + P + VI + D++K T
Sbjct: 503 AVRGLADACRALGTPVVGGNVSL----YNETGGTAIY-P-TPVIGMVGLIDDVSKRTTSG 556
Query: 928 LKLGDDGILLHIDLAKGKRRLGGSALAQVF-DQVGNESP--DLEDVPYLKRVFETVQDLI 984
K D I L L + K LGGS +V VG P DLE KR+ E V++ I
Sbjct: 557 FKKEGDLIYL---LGETKDELGGSEYLKVIHGHVGGRPPKVDLEA---EKRLQELVREAI 610
Query: 985 GDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELG-LVLEVSK 1043
+ LV++ HD+S+GGL V EM+ AG G +DL S+G LF+E G V+ V
Sbjct: 611 REGLVTSAHDVSEGGLAVALAEMAIAGGLGAEVDL-SDGLRPDALLFSESQGRYVVSVPP 669
Query: 1044 SNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEET 1096
N + AGV A IG V ++++K + L E LR+ WE
Sbjct: 670 ENEEAFEALAEAAGVPATRIGVVG-GDALKVKGNDTESLEE----LREAWEGA 717
|
Length = 724 |
| >gnl|CDD|234913 PRK01175, PRK01175, phosphoribosylformylglycinamidine synthase I; Provisional | Back alignment and domain information |
|---|
Score = 159 bits (403), Expect = 2e-43
Identities = 82/247 (33%), Positives = 126/247 (51%), Gaps = 10/247 (4%)
Query: 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADV 1204
+VAV+R EG+N + E AF G EP V ++DL S+ ++ +V GGFS D
Sbjct: 4 IRVAVLRMEGTNCEDETVKAFRRLGVEPEYVHINDLAAERKSVSDYDCLVIPGGFSAGDY 63
Query: 1205 LDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAG 1264
+ + ++A R L +EF +G+CNG Q++ LG +PG
Sbjct: 64 IRAGAIFAA--RLKAVLRKDIEEFIDE-GYPIIGICNGFQVLVELGLLPG-----FDEIA 115
Query: 1265 GDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVL 1324
P + NES RFECR + + E+ I K ++ V AH EGR F ++ +L
Sbjct: 116 EKP-EMALTVNESNRFECRPTYLKKENRKCIFTKLLKKDVFQVPVAHAEGRVVFSEEEIL 174
Query: 1325 DRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQ 1384
+R++ + RY D++GN YP+N NGS +A I + G + +MPHPER F +Q
Sbjct: 175 ERLIENDQIVFRYVDENGNYAG-YPWNPNGSIYNIAGITNEKGNVIGLMPHPERAFYGYQ 233
Query: 1385 YPWYPKN 1391
+P++ K
Sbjct: 234 HPYWEKE 240
|
Length = 261 |
| >gnl|CDD|233553 TIGR01737, FGAM_synth_I, phosphoribosylformylglycinamidine synthase I | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 8e-37
Identities = 82/237 (34%), Positives = 117/237 (49%), Gaps = 31/237 (13%)
Query: 1146 KVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVL 1205
KVAVIR G+N DR+ A G + V D SL ++ G+V GGFSY D L
Sbjct: 2 KVAVIRFPGTNCDRDTVYALRLLGVDAEIVWYEDG-----SLPDYDGVVLPGGFSYGDYL 56
Query: 1206 DSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGG 1265
+ +AS P++ + +EF ++ LG+CNG Q++ G +PG
Sbjct: 57 RAGAIAAAS-----PIMQEVREFAEK-GVPVLGICNGFQILVEAGLLPGA---------- 100
Query: 1266 DPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGM-EGSTLGVWAAHGEGRAYFPDDGVL 1324
+ N+S RF CR+ + +E++ I K +G + + AHGEGR Y+ DD L
Sbjct: 101 ------LLPNDSLRFICRWVYLRVENADTIFTKNYKKGEVIRIPIAHGEGR-YYADDETL 153
Query: 1325 DRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381
R+ + RYCD+DG+ E N NGS +A I + G L MMPHPER
Sbjct: 154 ARLESNDQVVFRYCDEDGDVAE--EANPNGSVGNIAGIVNERGNVLGMMPHPERASE 208
|
In some species, phosphoribosylformylglycinamidine synthase is composed of a single polypeptide chain. This model describes the PurQ protein of Bacillus subtilis (where PurL, PurQ, and PurS are required for phosphoribosylformylglycinamidine synthase activity) and functionally equivalent proteins from other bacteria and archaea [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]. Length = 227 |
| >gnl|CDD|235140 PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase I; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 5e-30
Identities = 77/239 (32%), Positives = 103/239 (43%), Gaps = 46/239 (19%)
Query: 1146 KVAVIREEGSNGDREMSAAF-YAAGFEP---WDVTMSDLINGAISLDEFRGIVFVGGFSY 1201
KVAVI GSN DR+M+ A G EP W LD +V GGFSY
Sbjct: 2 KVAVIVFPGSNCDRDMARALRDLLGAEPEYVWH--------KETDLDGVDAVVLPGGFSY 53
Query: 1202 ADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVH 1261
D L A F P++ +EF ++ LG+CNG Q++ G +PG
Sbjct: 54 GDYLRCG----AIAAF-SPIMKAVKEFAEK-GKPVLGICNGFQILTEAGLLPGA------ 101
Query: 1262 GAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGME-GSTLGVWAAHGEGRAYFPD 1320
N S +F CR + +E++ G E G + + AHGEG Y+ D
Sbjct: 102 ----------LTRNASLKFICRDVHLRVENNDTPFTSGYEKGEVIRIPIAHGEGN-YYAD 150
Query: 1321 DGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERC 1379
+ L R+ + RYCD+ N NGS +A I + G L MMPHPER
Sbjct: 151 EETLKRLEGNGQVVFRYCDE----------NPNGSVNDIAGIVNEKGNVLGMMPHPERA 199
|
Length = 219 |
| >gnl|CDD|100029 cd02193, PurL, Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 3e-25
Identities = 87/274 (31%), Positives = 127/274 (46%), Gaps = 16/274 (5%)
Query: 806 GGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGA 865
G A I E ++P A A VG A+ + + A + S NWM +A GE A
Sbjct: 2 GEAMKIEEHNHPAAIDPAAGAATGVGGAIRD-IAATGIDAKPIALSANWMASAGHPGEDA 60
Query: 866 AMYDAATALAEAMIELGIAIDGGKDSLSM--AAYSGGEVVKA--PGSLVISVYVTCPDIT 921
+YDA +AE +LG+ I GKD +SM G E + P SLVIS + D
Sbjct: 61 ILYDAVKGVAELCNQLGLPIPVGKDRMSMKTRWQEGNEQREMTHPPSLVISAFGRVRDD- 119
Query: 922 KTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQV---FDQVGNESPDLEDVPYLKRVFE 978
+ P L + +LL I KG LGG+ALA V + Q+G++S + D K +E
Sbjct: 120 RHTLPQLSTEGNALLL-IGGGKGHNGLGGTALASVALSYRQLGDKSAQVRDPAQEKGFYE 178
Query: 979 TVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEG------NSLFQTLFA 1032
+Q L+ + HD GGLLV E+ FAG+ G+ +DL + G L LF
Sbjct: 179 AMQALVAAGKLLAWHDRGAGGLLVALAELVFAGHCGVQVDLAALGDDEPDMEPLEIALFE 238
Query: 1033 EELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQV 1066
+ V++V + D V + + ++GQ
Sbjct: 239 SQERGVIQVRAEDRDAVEEAQYGLADCVHVLGQA 272
|
In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM. Length = 272 |
| >gnl|CDD|217219 pfam02769, AIRS_C, AIR synthase related protein, C-terminal domain | Back alignment and domain information |
|---|
Score = 97.8 bits (244), Expect = 2e-23
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 537 GMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMG 596
G +++ +G G+ G S + G D AV GD + L VV +G
Sbjct: 3 GDVLILLGS----SGLHGSGLSLVRKGLED----DGAVPLGDPLLEPTLIYVVLLLAALG 54
Query: 597 ETNPIISIHDQGAGGNCNVVKEIIYP--KGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDA 654
+ + HD GG + E+ GAEID+ + + + L LE+ +E Q +
Sbjct: 55 L---VKAAHDITGGGLAGALAEMAPASGVGAEIDLDKVPIFEELLLPLEMLFSENQGRGL 111
Query: 655 VLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVD 692
V+V PE + + +I E E + AVIG ++ G + LV
Sbjct: 112 VVVVPEEAEAVLAILEEEGLPAAVIGEVTAGGGLTLVV 149
|
This family includes Hydrogen expression/formation protein HypE, AIR synthases EC:6.3.3.1, FGAM synthase EC:6.3.5.3 and selenide, water dikinase EC:2.7.9.3. The function of the C-terminal domain of AIR synthase is unclear, but the cleft formed between N and C domains is postulated as a sulphate binding site. Length = 150 |
| >gnl|CDD|217219 pfam02769, AIRS_C, AIR synthase related protein, C-terminal domain | Back alignment and domain information |
|---|
Score = 87.4 bits (217), Expect = 7e-20
Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 6/135 (4%)
Query: 949 GGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMS 1008
G + + L D + V L LV HDI+ GGL EM+
Sbjct: 16 GSGLSLVRKGLEDDGAVPLGDPLLEPTLIYVVLLLAALGLVKAAHDITGGGLAGALAEMA 75
Query: 1009 FAGNYGITLDLNS-----EGNSLFQTLFAEELG-LVLEVSKSNLDTVSKKLHDAGVSAEI 1062
A G +DL+ E + LF+E G ++ V + V L + G+ A +
Sbjct: 76 PASGVGAEIDLDKVPIFEELLLPLEMLFSENQGRGLVVVVPEEAEAVLAILEEEGLPAAV 135
Query: 1063 IGQVNSSHSVEIKVD 1077
IG+V + + + V
Sbjct: 136 IGEVTAGGGLTLVVK 150
|
This family includes Hydrogen expression/formation protein HypE, AIR synthases EC:6.3.3.1, FGAM synthase EC:6.3.5.3 and selenide, water dikinase EC:2.7.9.3. The function of the C-terminal domain of AIR synthase is unclear, but the cleft formed between N and C domains is postulated as a sulphate binding site. Length = 150 |
| >gnl|CDD|184499 PRK14090, PRK14090, phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
Score = 75.7 bits (186), Expect = 1e-13
Identities = 79/333 (23%), Positives = 137/333 (41%), Gaps = 51/333 (15%)
Query: 365 SAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRD 424
S K + +++L + + F E+HN P A+ PY GA TG GG IRD
Sbjct: 34 SHTKKY-IRRLPKTGFEGNAGVVNLDDYYSIAFKIESHNHPSAIEPYNGAATGVGGIIRD 92
Query: 425 THATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQI--LIDA-SNGAS 481
A G P+ + L + +ID G +
Sbjct: 93 VLAMG-------------------------------ARPTAIFDSLHMSRIIDGIIEGIA 121
Query: 482 DYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVV 541
DYGN G P + G +R+ S L ++ + G+ + D SK G ++V
Sbjct: 122 DYGNSIGVPTVGGE-----LRISSLYAHNPLVNVL-AAGVVRNDMLVDSKASRP-GQVIV 174
Query: 542 KIGGPAYRIGMGGGA-ASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNP 600
GG R G+ G + AS ++G+ L ++Q GD A+K+ ++ A +EM E
Sbjct: 175 IFGGATGRDGIHGASFASEDLTGEKATKL---SIQVGDP-FAEKM--LIEAFLEMVEEGL 228
Query: 601 IISIHDQGAGGNCNVVKEIIYPK--GAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVK 658
+ D GAGG + E++ GA + + + + + + EI +E QE+ AV+
Sbjct: 229 VEGAQDLGAGGVLSATSELVAKGGLGAIVHLDRVPLREPDMEPWEILISESQERMAVVTS 288
Query: 659 PESRDLLQSICERERVSMAVIGTISGEGRVVLV 691
PE + I ++ + ++ + + ++
Sbjct: 289 PEKASRILEIAKKHLLFGDIVAEVIDDPIYRVM 321
|
Length = 601 |
| >gnl|CDD|216008 pfam00586, AIRS, AIR synthase related protein, N-terminal domain | Back alignment and domain information |
|---|
Score = 52.9 bits (128), Expect = 2e-08
Identities = 25/112 (22%), Positives = 38/112 (33%), Gaps = 23/112 (20%)
Query: 385 QLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVG 444
+L E + TH A+ PY G T G + D A G+ +A G +G
Sbjct: 8 RLGEGKALVVTTDGVVTHVHFAAIDPYDGGATAVAGNLSDLAA--MGAKPLALLDGLALG 65
Query: 445 NLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYT 496
+ L + G ++ N+FG PL+ G T
Sbjct: 66 EGL---------------------DPEWLEEIVRGIAEAANEFGVPLVGGDT 96
|
This family includes Hydrogen expression/formation protein HypE, AIR synthases EC:6.3.3.1, FGAM synthase EC:6.3.5.3 and selenide, water dikinase EC:2.7.9.3. The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain. Length = 96 |
| >gnl|CDD|100027 cd00396, PurM-like, AIR (aminoimidazole ribonucleotide) synthase related protein | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 55/258 (21%), Positives = 88/258 (34%), Gaps = 60/258 (23%)
Query: 819 LLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAM 878
+NP A RLAVG A+ ++ + + + L+ + + D +AEA
Sbjct: 14 AINPWAGGRLAVGGAVNDIA---AMGARPIALLASLSLSNGLEVDI--LEDVVDGVAEAC 68
Query: 879 IELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLH 938
+LG+ I GG S+S T L + G++
Sbjct: 69 NQLGVPIVGGHTSVSPG-------------------------TMGHKLSLAVFAIGVVEK 103
Query: 939 IDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDG 998
+ G L + + V +L+ V HDI+DG
Sbjct: 104 DRVIDSSGARPGDVLI-LTGV------------------DAVLELVAAGDVHAMHDITDG 144
Query: 999 GLLVCTLEMSFAGNYGITLDLNS-----EGNSLFQT------LFAEELGLVLEVSKSNLD 1047
GLL E++ A G +DL + L LF GL++ V D
Sbjct: 145 GLLGTLPELAQASGVGAEIDLEAIPLDEVVRWLCVEHIEEALLFNSSGGLLIAVPAEEAD 204
Query: 1048 TVSKKLHDAGVSAEIIGQ 1065
V L+ G+ A +IG+
Sbjct: 205 AVLLLLNGNGIDAAVIGR 222
|
This family includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM (formylglycinamidine ribonucleotide) synthase and Selenophosphate synthetase (SelD). The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain. Length = 222 |
| >gnl|CDD|153210 cd01653, GATase1, Type 1 glutamine amidotransferase (GATase1)-like domain | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 9e-07
Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 14/105 (13%)
Query: 1147 VAVIREEGSNGDREMS--AAFYAAGFEPWDVTMS-DLINGAISLDEFRGIVFVGGFSYAD 1203
VAV+ G S A AG E V+ + + LD++ G++ GG D
Sbjct: 1 VAVLLFPGFEELELASPLDALREAGAEVDVVSPDGGPVESDVDLDDYDGLILPGGPGTPD 60
Query: 1204 VLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMAL 1248
L ++ LL +E LG+C G QL+ L
Sbjct: 61 DL----------ARDEALLALLREAAAA-GKPILGICLGAQLLVL 94
|
Type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA. and, the A4 beta-galactosidase middle domain. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. For Pyrococcus horikoshii PH1704, the Cys of the nucleophile elbow together with a different His and, a Glu from an adjacent monomer form a catalytic triad different from the typical GATase1 triad. The E. coli HP-II C-terminal domain, S. meliloti Rm1021 ThuA and the A4 beta-galactosidase middle domain lack the catalytic triad typical GATaseI domains. GATase1-like domains can occur either as single polypeptides, as in Class I glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase. Length = 115 |
| >gnl|CDD|153222 cd03128, GAT_1, Type 1 glutamine amidotransferase (GATase1)-like domain | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 2e-06
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 1147 VAVIREEGSNGDREMS--AAFYAAGFEPWDVTMS-DLINGAISLDEFRGIVFVGGFSYAD 1203
VAV+ GS S A AG E V+ + + LD++ G++ GG D
Sbjct: 1 VAVLLFGGSEELELASPLDALREAGAEVDVVSPDGGPVESDVDLDDYDGLILPGGPGTPD 60
Query: 1204 VLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLM 1246
L +++ LL +E LG+C G QL+
Sbjct: 61 DL----------AWDEALLALLREAAAA-GKPVLGICLGAQLL 92
|
Type 1 glutamine amidotransferase (GATase1)-like domain. This group contains proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA, the A4 beta-galactosidase middle domain and peptidase E. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase (CPSase), cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. For Pyrococcus horikoshii PH1704, the Cys of the nucleophile elbow together with a different His and, a Glu from an adjacent monomer form a catalytic triad different from the typical GATase1 triad. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad of typical GATase1 domains, by having a Ser in place of the reactive Cys at the nucleophile elbow. The E. coli HP-II C-terminal domain, S. meliloti Rm1021 ThuA and the A4 beta-galactosidase middle domain lack the catalytic triad typical GATaseI domains. GATase1-like domains can occur either as single polypeptides, as in Class I glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase. Peptidase E has a circular permutation in the common core of a typical GTAse1 domain. Length = 92 |
| >gnl|CDD|100027 cd00396, PurM-like, AIR (aminoimidazole ribonucleotide) synthase related protein | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 8e-06
Identities = 50/294 (17%), Positives = 86/294 (29%), Gaps = 80/294 (27%)
Query: 395 VLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAP 454
+ + + N P A+ P+ G GG + D A G + +A A + N
Sbjct: 2 LAMSTDGINPPLAINPWAGGRLAVGGAVNDIAAMG--ARPIALLASLSLSNGLEVD---- 55
Query: 455 WEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKP 514
IL D +G ++ N+ G P++ G+T + K
Sbjct: 56 -----------------ILEDVVDGVAEACNQLGVPIVGGHTSVSPGTMGH-------KL 91
Query: 515 IMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAV 574
+ IG ++ + +
Sbjct: 92 SLAVFAIGVVEKDRVIDSS---------------------------------------GA 112
Query: 575 QRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPK--GAEIDIRAI 632
+ GD + V + G + ++HD GG + E+ GAEID+ AI
Sbjct: 113 RPGDVLILTG-VDAVLELVAAG---DVHAMHDITDGGLLGTLPELAQASGVGAEIDLEAI 168
Query: 633 ---IVGDHTLSVLEIWGAEYQEQDAVL--VKPESRDLLQSICERERVSMAVIGT 681
V + +L V E D + + + AVIG
Sbjct: 169 PLDEVVRWLCVEHIEEALLFNSSGGLLIAVPAEEADAVLLLLNGNGIDAAVIGR 222
|
This family includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM (formylglycinamidine ribonucleotide) synthase and Selenophosphate synthetase (SelD). The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain. Length = 222 |
| >gnl|CDD|223592 COG0518, GuaA, GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 28/132 (21%), Positives = 41/132 (31%), Gaps = 30/132 (22%)
Query: 1182 NGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCN 1241
+ LD GI+ GG V D W P + P LG+C
Sbjct: 38 AEELPLDSPDGIIISGG--PMSVYDEDP-WL-------PREKDLIKDAGVPGKPVLGICL 87
Query: 1242 GCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGME 1301
G QL+A +GG G E G V + + + G+
Sbjct: 88 GHQLLAK-------ALGGKVERGP--------KREIGWTP-----VELTEGDDPLFAGLP 127
Query: 1302 GSTLGVWAAHGE 1313
V+ +HG+
Sbjct: 128 DLFTTVFMSHGD 139
|
Length = 198 |
| >gnl|CDD|188564 TIGR04049, AIR_rel_sll0787, AIR synthase-related protein, sll0787 family | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 5e-04
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 986 DELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNS----EGNSLFQTLFA-EELGLVLE 1040
LV DIS GG+L L + G LDL++ G L + L + G +L
Sbjct: 205 AGLVDAAKDISMGGILGTALMLLECSGVGADLDLDAIPRPPGVDLDRWLTSFPSFGFLLA 264
Query: 1041 VSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHL 1082
V +++D V+++ G++ IG++ + V +K G + L
Sbjct: 265 VRPADVDAVAQRFAARGLACAAIGEITAGGQVVLKDGGESAL 306
|
Members of this family include sll0787 from Synechocystis sp. PCC 6803 and resemble the C-terminal region of MSMEG_0567 from Mycobacterium smegmatis, where the N-terminal is a GNAT family N-acetyltransferase. The conserved cluster is found broadly (Cyanobacteria, Proteobacteria, Actinobacteria) in about 8 percent of genomes and appears to be biosynthetic. The product is unkown [Unknown function, Enzymes of unknown specificity]. Length = 316 |
| >gnl|CDD|100034 cd02203, PurL_repeat1, PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat | Back alignment and domain information |
|---|
Score = 41.3 bits (98), Expect = 0.002
Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 23/131 (17%)
Query: 959 QVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLD 1018
QVG+ P +E K++ E + + L+ D+ GGL EM+ G G +D
Sbjct: 189 QVGD--PFME-----KKLQEAILEARETGLIVGIQDLGAGGLSSAVSEMAAKGGLGAEID 241
Query: 1019 LNSEGNSLFQ----TLFAEELGL-------VLEVSKSNLDTVSKKLHDAGVSAEIIGQVN 1067
L + E+ + +L V +L+ + A +IG+V
Sbjct: 242 L-----DKVPLREPGMSPWEIWISESQERMLLVVPPEDLEEFLAICKKEDLEAAVIGEVT 296
Query: 1068 SSHSVEIKVDG 1078
+ + G
Sbjct: 297 DDGRLRLYYKG 307
|
FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM. Length = 313 |
| >gnl|CDD|225055 COG2144, COG2144, Selenophosphate synthetase-related proteins [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.003
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 7/111 (6%)
Query: 974 KRVFETVQDLI--GDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNS----EGNSLF 1027
K F +L+ G +LV G D+S+GGLL L + G +DL+S
Sbjct: 192 KEKFRAQLELLREGAKLVKAGKDVSNGGLLGTLLMLLEKSRVGAGVDLDSIPYPADVDFR 251
Query: 1028 QTLFAE-ELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVD 1077
Q L G VL V +++ V + G A +IG+V + I
Sbjct: 252 QWLKRYPGSGFVLTVDPEDVEEVVDVFEEEGCPATVIGEVIEEPVLRIGDG 302
|
Length = 324 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1414 | |||
| PLN03206 | 1307 | phosphoribosylformylglycinamidine synthase; Provis | 100.0 | |
| KOG1907 | 1320 | consensus Phosphoribosylformylglycinamidine syntha | 100.0 | |
| TIGR01735 | 1310 | FGAM_synt phosphoribosylformylglycinamidine syntha | 100.0 | |
| PRK05297 | 1290 | phosphoribosylformylglycinamidine synthase; Provis | 100.0 | |
| TIGR01857 | 1239 | FGAM-synthase phosphoribosylformylglycinamidine sy | 100.0 | |
| PHA03366 | 1304 | FGAM-synthase; Provisional | 100.0 | |
| TIGR01739 | 1202 | tegu_FGAM_synt herpesvirus tegument protein/v-FGAM | 100.0 | |
| COG0046 | 743 | PurL Phosphoribosylformylglycinamidine (FGAM) synt | 100.0 | |
| PRK01213 | 724 | phosphoribosylformylglycinamidine synthase II; Pro | 100.0 | |
| TIGR01736 | 715 | FGAM_synth_II phosphoribosylformylglycinamidine sy | 100.0 | |
| PRK14090 | 601 | phosphoribosylformylglycinamidine synthase II; Pro | 100.0 | |
| PF13507 | 259 | GATase_5: CobB/CobQ-like glutamine amidotransferas | 100.0 | |
| COG0047 | 231 | PurL Phosphoribosylformylglycinamidine (FGAM) synt | 100.0 | |
| PRK01175 | 261 | phosphoribosylformylglycinamidine synthase I; Prov | 100.0 | |
| cd02203 | 313 | PurL_repeat1 PurL subunit of the formylglycinamide | 100.0 | |
| cd01740 | 238 | GATase1_FGAR_AT Type 1 glutamine amidotransferase | 100.0 | |
| TIGR01737 | 227 | FGAM_synth_I phosphoribosylformylglycinamidine syn | 100.0 | |
| PRK03619 | 219 | phosphoribosylformylglycinamidine synthase I; Prov | 100.0 | |
| cd02193 | 272 | PurL Formylglycinamide ribonucleotide amidotransfe | 100.0 | |
| cd02193 | 272 | PurL Formylglycinamide ribonucleotide amidotransfe | 100.0 | |
| cd02204 | 264 | PurL_repeat2 PurL subunit of the formylglycinamide | 100.0 | |
| PRK14090 | 601 | phosphoribosylformylglycinamidine synthase II; Pro | 100.0 | |
| TIGR01736 | 715 | FGAM_synth_II phosphoribosylformylglycinamidine sy | 100.0 | |
| TIGR03267 | 323 | methan_mark_2 putative methanogenesis marker prote | 100.0 | |
| COG0611 | 317 | ThiL Thiamine monophosphate kinase [Coenzyme metab | 100.0 | |
| TIGR03267 | 323 | methan_mark_2 putative methanogenesis marker prote | 100.0 | |
| cd02203 | 313 | PurL_repeat1 PurL subunit of the formylglycinamide | 100.0 | |
| TIGR01379 | 317 | thiL thiamine-monophosphate kinase. Proteins scori | 99.97 | |
| PRK05731 | 318 | thiamine monophosphate kinase; Provisional | 99.97 | |
| TIGR02124 | 320 | hypE hydrogenase expression/formation protein HypE | 99.97 | |
| PRK01213 | 724 | phosphoribosylformylglycinamidine synthase II; Pro | 99.97 | |
| cd02691 | 346 | PurM-like2 AIR synthase (PurM) related protein, ar | 99.97 | |
| cd02194 | 291 | ThiL ThiL (Thiamine-monophosphate kinase) plays a | 99.97 | |
| cd02192 | 283 | PurM-like3 AIR synthase (PurM) related protein, su | 99.97 | |
| cd02197 | 293 | HypE HypE (Hydrogenase expression/formation protei | 99.96 | |
| TIGR01735 | 1310 | FGAM_synt phosphoribosylformylglycinamidine syntha | 99.96 | |
| PRK00943 | 347 | selenophosphate synthetase; Provisional | 99.96 | |
| TIGR02124 | 320 | hypE hydrogenase expression/formation protein HypE | 99.96 | |
| COG0309 | 339 | HypE Hydrogenase maturation factor [Posttranslatio | 99.96 | |
| COG2144 | 324 | Selenophosphate synthetase-related proteins [Gener | 99.96 | |
| TIGR00878 | 332 | purM phosphoribosylaminoimidazole synthetase. This | 99.96 | |
| cd02192 | 283 | PurM-like3 AIR synthase (PurM) related protein, su | 99.96 | |
| cd02204 | 264 | PurL_repeat2 PurL subunit of the formylglycinamide | 99.96 | |
| cd02195 | 287 | SelD Selenophosphate synthetase (SelD) catalyzes t | 99.96 | |
| PRK05385 | 327 | phosphoribosylaminoimidazole synthetase; Provision | 99.96 | |
| cd02197 | 293 | HypE HypE (Hydrogenase expression/formation protei | 99.96 | |
| cd02195 | 287 | SelD Selenophosphate synthetase (SelD) catalyzes t | 99.96 | |
| cd06061 | 298 | PurM-like1 AIR synthase (PurM) related protein, su | 99.95 | |
| COG0118 | 204 | HisH Glutamine amidotransferase [Amino acid transp | 99.95 | |
| TIGR01379 | 317 | thiL thiamine-monophosphate kinase. Proteins scori | 99.95 | |
| cd00396 | 222 | PurM-like AIR (aminoimidazole ribonucleotide) synt | 99.95 | |
| cd00396 | 222 | PurM-like AIR (aminoimidazole ribonucleotide) synt | 99.95 | |
| cd02196 | 297 | PurM PurM (Aminoimidazole Ribonucleotide [AIR] syn | 99.95 | |
| PRK05731 | 318 | thiamine monophosphate kinase; Provisional | 99.95 | |
| COG0611 | 317 | ThiL Thiamine monophosphate kinase [Coenzyme metab | 99.95 | |
| cd02196 | 297 | PurM PurM (Aminoimidazole Ribonucleotide [AIR] syn | 99.95 | |
| cd02194 | 291 | ThiL ThiL (Thiamine-monophosphate kinase) plays a | 99.95 | |
| TIGR00878 | 332 | purM phosphoribosylaminoimidazole synthetase. This | 99.95 | |
| cd02691 | 346 | PurM-like2 AIR synthase (PurM) related protein, ar | 99.95 | |
| PLN02557 | 379 | phosphoribosylformylglycinamidine cyclo-ligase | 99.95 | |
| PRK14105 | 345 | selenophosphate synthetase; Provisional | 99.94 | |
| PRK05297 | 1290 | phosphoribosylformylglycinamidine synthase; Provis | 99.94 | |
| PRK00943 | 347 | selenophosphate synthetase; Provisional | 99.94 | |
| COG2144 | 324 | Selenophosphate synthetase-related proteins [Gener | 99.94 | |
| PRK05385 | 327 | phosphoribosylaminoimidazole synthetase; Provision | 99.94 | |
| COG0046 | 743 | PurL Phosphoribosylformylglycinamidine (FGAM) synt | 99.94 | |
| TIGR00476 | 347 | selD selenium donor protein. In prokaryotes, the i | 99.93 | |
| cd06061 | 298 | PurM-like1 AIR synthase (PurM) related protein, su | 99.93 | |
| TIGR00476 | 347 | selD selenium donor protein. In prokaryotes, the i | 99.93 | |
| COG0309 | 339 | HypE Hydrogenase maturation factor [Posttranslatio | 99.92 | |
| PRK14105 | 345 | selenophosphate synthetase; Provisional | 99.92 | |
| PHA03366 | 1304 | FGAM-synthase; Provisional | 99.92 | |
| TIGR01739 | 1202 | tegu_FGAM_synt herpesvirus tegument protein/v-FGAM | 99.91 | |
| PLN03206 | 1307 | phosphoribosylformylglycinamidine synthase; Provis | 99.88 | |
| PLN02557 | 379 | phosphoribosylformylglycinamidine cyclo-ligase | 99.85 | |
| TIGR01857 | 1239 | FGAM-synthase phosphoribosylformylglycinamidine sy | 99.83 | |
| PRK13526 | 179 | glutamine amidotransferase subunit PdxT; Provision | 99.82 | |
| PRK13142 | 192 | hisH imidazole glycerol phosphate synthase subunit | 99.81 | |
| PRK14004 | 210 | hisH imidazole glycerol phosphate synthase subunit | 99.8 | |
| CHL00188 | 210 | hisH imidazole glycerol phosphate synthase subunit | 99.8 | |
| PLN02832 | 248 | glutamine amidotransferase subunit of pyridoxal 5' | 99.75 | |
| PRK13146 | 209 | hisH imidazole glycerol phosphate synthase subunit | 99.75 | |
| PRK13152 | 201 | hisH imidazole glycerol phosphate synthase subunit | 99.75 | |
| PRK13170 | 196 | hisH imidazole glycerol phosphate synthase subunit | 99.74 | |
| PLN02617 | 538 | imidazole glycerol phosphate synthase hisHF | 99.73 | |
| COG0150 | 345 | PurM Phosphoribosylaminoimidazole (AIR) synthetase | 99.71 | |
| PRK13143 | 200 | hisH imidazole glycerol phosphate synthase subunit | 99.68 | |
| PF02769 | 153 | AIRS_C: AIR synthase related protein, C-terminal d | 99.67 | |
| KOG0623 | 541 | consensus Glutamine amidotransferase/cyclase [Amin | 99.64 | |
| PRK13181 | 199 | hisH imidazole glycerol phosphate synthase subunit | 99.64 | |
| COG0709 | 346 | SelD Selenophosphate synthase [Amino acid transpor | 99.64 | |
| PRK13525 | 189 | glutamine amidotransferase subunit PdxT; Provision | 99.63 | |
| PF02769 | 153 | AIRS_C: AIR synthase related protein, C-terminal d | 99.62 | |
| PRK13141 | 205 | hisH imidazole glycerol phosphate synthase subunit | 99.62 | |
| COG1973 | 449 | HypE Hydrogenase maturation factor [Posttranslatio | 99.6 | |
| TIGR03800 | 184 | PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, gl | 99.6 | |
| COG0709 | 346 | SelD Selenophosphate synthase [Amino acid transpor | 99.59 | |
| cd01748 | 198 | GATase1_IGP_Synthase Type 1 glutamine amidotransfe | 99.59 | |
| COG0311 | 194 | PDX2 Predicted glutamine amidotransferase involved | 99.57 | |
| TIGR00888 | 188 | guaA_Nterm GMP synthase (glutamine-hydrolyzing), N | 99.55 | |
| PRK13527 | 200 | glutamine amidotransferase subunit PdxT; Provision | 99.54 | |
| PRK00758 | 184 | GMP synthase subunit A; Validated | 99.53 | |
| cd01742 | 181 | GATase1_GMP_Synthase Type 1 glutamine amidotransfe | 99.53 | |
| TIGR01855 | 196 | IMP_synth_hisH imidazole glycerol phosphate syntha | 99.52 | |
| PF01174 | 188 | SNO: SNO glutamine amidotransferase family; InterP | 99.5 | |
| COG1973 | 449 | HypE Hydrogenase maturation factor [Posttranslatio | 99.5 | |
| PRK06895 | 190 | putative anthranilate synthase component II; Provi | 99.5 | |
| PF00586 | 96 | AIRS: AIR synthase related protein, N-terminal dom | 99.49 | |
| PRK00074 | 511 | guaA GMP synthase; Reviewed | 99.48 | |
| PLN02347 | 536 | GMP synthetase | 99.46 | |
| KOG0237 | 788 | consensus Glycinamide ribonucleotide synthetase (G | 99.43 | |
| TIGR01815 | 717 | TrpE-clade3 anthranilate synthase, alpha proteobac | 99.39 | |
| PRK06774 | 191 | para-aminobenzoate synthase component II; Provisio | 99.38 | |
| cd01749 | 183 | GATase1_PB Glutamine Amidotransferase (GATase_I) i | 99.38 | |
| PRK06278 | 476 | cobyrinic acid a,c-diamide synthase; Validated | 99.36 | |
| PF00586 | 96 | AIRS: AIR synthase related protein, N-terminal dom | 99.36 | |
| PRK13566 | 720 | anthranilate synthase; Provisional | 99.34 | |
| cd01743 | 184 | GATase1_Anthranilate_Synthase Type 1 glutamine ami | 99.33 | |
| CHL00101 | 190 | trpG anthranilate synthase component 2 | 99.32 | |
| PRK06490 | 239 | glutamine amidotransferase; Provisional | 99.31 | |
| PRK07765 | 214 | para-aminobenzoate synthase component II; Provisio | 99.31 | |
| PF00117 | 192 | GATase: Glutamine amidotransferase class-I; InterP | 99.31 | |
| PRK05670 | 189 | anthranilate synthase component II; Provisional | 99.29 | |
| PLN02335 | 222 | anthranilate synthase | 99.29 | |
| TIGR00566 | 188 | trpG_papA glutamine amidotransferase of anthranila | 99.27 | |
| PRK08007 | 187 | para-aminobenzoate synthase component II; Provisio | 99.26 | |
| PRK07649 | 195 | para-aminobenzoate/anthranilate synthase glutamine | 99.24 | |
| cd01741 | 188 | GATase1_1 Subgroup of proteins having the Type 1 g | 99.23 | |
| PRK05637 | 208 | anthranilate synthase component II; Provisional | 99.23 | |
| COG0518 | 198 | GuaA GMP synthase - Glutamine amidotransferase dom | 99.21 | |
| PRK08857 | 193 | para-aminobenzoate synthase component II; Provisio | 99.2 | |
| KOG3939 | 312 | consensus Selenophosphate synthetase [Signal trans | 99.2 | |
| PRK06186 | 229 | hypothetical protein; Validated | 99.16 | |
| cd01745 | 189 | GATase1_2 Subgroup of proteins having the Type 1 g | 99.16 | |
| PRK08250 | 235 | glutamine amidotransferase; Provisional | 99.16 | |
| cd01744 | 178 | GATase1_CPSase Small chain of the glutamine-depend | 99.15 | |
| COG0150 | 345 | PurM Phosphoribosylaminoimidazole (AIR) synthetase | 99.14 | |
| PF07722 | 217 | Peptidase_C26: Peptidase C26; InterPro: IPR011697 | 99.11 | |
| PRK11366 | 254 | puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; | 99.08 | |
| PRK05380 | 533 | pyrG CTP synthetase; Validated | 99.07 | |
| TIGR00337 | 525 | PyrG CTP synthase. CTP synthase is involved in pyr | 99.07 | |
| COG2071 | 243 | Predicted glutamine amidotransferases [General fun | 99.06 | |
| cd01746 | 235 | GATase1_CTP_Synthase Type 1 glutamine amidotransfe | 99.06 | |
| PRK12564 | 360 | carbamoyl phosphate synthase small subunit; Review | 99.04 | |
| cd01747 | 273 | GATase1_Glutamyl_Hydrolase Type 1 glutamine amidot | 99.03 | |
| PLN02327 | 557 | CTP synthase | 99.0 | |
| COG0512 | 191 | PabA Anthranilate/para-aminobenzoate synthases com | 98.99 | |
| PRK09522 | 531 | bifunctional glutamine amidotransferase/anthranila | 98.98 | |
| cd01750 | 194 | GATase1_CobQ Type 1 glutamine amidotransferase (GA | 98.97 | |
| PRK07053 | 234 | glutamine amidotransferase; Provisional | 98.97 | |
| TIGR01823 | 742 | PabB-fungal aminodeoxychorismate synthase, fungal | 98.97 | |
| PRK09065 | 237 | glutamine amidotransferase; Provisional | 98.97 | |
| TIGR01368 | 358 | CPSaseIIsmall carbamoyl-phosphate synthase, small | 98.94 | |
| PRK05665 | 240 | amidotransferase; Provisional | 98.92 | |
| PRK14607 | 534 | bifunctional glutamine amidotransferase/anthranila | 98.91 | |
| PRK12838 | 354 | carbamoyl phosphate synthase small subunit; Review | 98.9 | |
| PRK07567 | 242 | glutamine amidotransferase; Provisional | 98.88 | |
| KOG1622 | 552 | consensus GMP synthase [Nucleotide transport and m | 98.87 | |
| CHL00197 | 382 | carA carbamoyl-phosphate synthase arginine-specifi | 98.86 | |
| KOG0237 | 788 | consensus Glycinamide ribonucleotide synthetase (G | 98.83 | |
| PLN02771 | 415 | carbamoyl-phosphate synthase (glutamine-hydrolyzin | 98.81 | |
| KOG3210 | 226 | consensus Imidazoleglycerol-phosphate synthase sub | 98.81 | |
| cd03130 | 198 | GATase1_CobB Type 1 glutamine amidotransferase (GA | 98.66 | |
| KOG3939 | 312 | consensus Selenophosphate synthetase [Signal trans | 98.64 | |
| KOG1907 | 1320 | consensus Phosphoribosylformylglycinamidine syntha | 98.59 | |
| PRK00784 | 488 | cobyric acid synthase; Provisional | 98.51 | |
| PLN02889 | 918 | oxo-acid-lyase/anthranilate synthase | 98.45 | |
| PF12818 | 282 | Tegument_dsDNA: dsDNA viral tegument protein; Inte | 98.44 | |
| PRK11780 | 217 | isoprenoid biosynthesis protein with amidotransfer | 98.44 | |
| COG0504 | 533 | PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide | 98.44 | |
| PRK01077 | 451 | cobyrinic acid a,c-diamide synthase; Validated | 98.32 | |
| cd03133 | 213 | GATase1_ES1 Type 1 glutamine amidotransferase (GAT | 98.31 | |
| TIGR00379 | 449 | cobB cobyrinic acid a,c-diamide synthase. This mod | 98.3 | |
| PRK05368 | 302 | homoserine O-succinyltransferase; Provisional | 98.29 | |
| TIGR01382 | 166 | PfpI intracellular protease, PfpI family. The memb | 98.22 | |
| PF07685 | 158 | GATase_3: CobB/CobQ-like glutamine amidotransferas | 98.21 | |
| cd03169 | 180 | GATase1_PfpI_1 Type 1 glutamine amidotransferase ( | 98.21 | |
| COG0505 | 368 | CarA Carbamoylphosphate synthase small subunit [Am | 98.19 | |
| cd03134 | 165 | GATase1_PfpI_like A type 1 glutamine amidotransfer | 98.19 | |
| TIGR00313 | 475 | cobQ cobyric acid synthase CobQ. | 98.18 | |
| cd03132 | 142 | GATase1_catalase Type 1 glutamine amidotransferase | 98.18 | |
| COG0693 | 188 | ThiJ Putative intracellular protease/amidase [Gene | 98.13 | |
| cd03144 | 114 | GATase1_ScBLP_like Type 1 glutamine amidotransfera | 98.09 | |
| cd03135 | 163 | GATase1_DJ-1 Type 1 glutamine amidotransferase (GA | 98.01 | |
| PRK13896 | 433 | cobyrinic acid a,c-diamide synthase; Provisional | 97.94 | |
| PRK11574 | 196 | oxidative-stress-resistance chaperone; Provisional | 97.92 | |
| cd03140 | 170 | GATase1_PfpI_3 Type 1 glutamine amidotransferase ( | 97.91 | |
| cd03146 | 212 | GAT1_Peptidase_E Type 1 glutamine amidotransferase | 97.9 | |
| TIGR01383 | 179 | not_thiJ DJ-1 family protein. This model represent | 97.87 | |
| cd03147 | 231 | GATase1_Ydr533c_like Type 1 glutamine amidotransfe | 97.83 | |
| PF09825 | 367 | BPL_N: Biotin-protein ligase, N terminal; InterPro | 97.81 | |
| PRK04155 | 287 | chaperone protein HchA; Provisional | 97.8 | |
| cd01653 | 115 | GATase1 Type 1 glutamine amidotransferase (GATase1 | 97.77 | |
| cd03137 | 187 | GATase1_AraC_1 AraC transcriptional regulators hav | 97.77 | |
| KOG2387 | 585 | consensus CTP synthase (UTP-ammonia lyase) [Nucleo | 97.77 | |
| cd03148 | 232 | GATase1_EcHsp31_like Type 1 glutamine amidotransfe | 97.6 | |
| cd03139 | 183 | GATase1_PfpI_2 Type 1 glutamine amidotransferase ( | 97.59 | |
| COG1492 | 486 | CobQ Cobyric acid synthase [Coenzyme metabolism] | 97.56 | |
| KOG1224 | 767 | consensus Para-aminobenzoate (PABA) synthase ABZ1 | 97.51 | |
| PRK11249 | 752 | katE hydroperoxidase II; Provisional | 97.46 | |
| cd03128 | 92 | GAT_1 Type 1 glutamine amidotransferase (GATase1)- | 97.44 | |
| COG3442 | 250 | Predicted glutamine amidotransferase [General func | 97.43 | |
| PRK06423 | 73 | phosphoribosylformylglycinamidine synthase; Provis | 97.43 | |
| cd03141 | 221 | GATase1_Hsp31_like Type 1 glutamine amidotransfera | 97.4 | |
| cd03138 | 195 | GATase1_AraC_2 AraC transcriptional regulators hav | 97.35 | |
| KOG0370 | 1435 | consensus Multifunctional pyrimidine synthesis pro | 97.35 | |
| PF01965 | 147 | DJ-1_PfpI: DJ-1/PfpI family; InterPro: IPR002818 T | 97.32 | |
| cd03136 | 185 | GATase1_AraC_ArgR_like AraC transcriptional regula | 97.23 | |
| KOG2764 | 247 | consensus Putative transcriptional regulator DJ-1 | 97.22 | |
| KOG3179 | 245 | consensus Predicted glutamine synthetase [Nucleoti | 97.15 | |
| TIGR00302 | 80 | phosphoribosylformylglycinamidine synthase, purS p | 97.12 | |
| PRK05974 | 80 | phosphoribosylformylglycinamidine synthase subunit | 97.11 | |
| COG1797 | 451 | CobB Cobyrinic acid a,c-diamide synthase [Coenzyme | 97.06 | |
| PRK09393 | 322 | ftrA transcriptional activator FtrA; Provisional | 96.71 | |
| KOG1559 | 340 | consensus Gamma-glutamyl hydrolase [Coenzyme trans | 96.71 | |
| PF13278 | 166 | DUF4066: Putative amidotransferase; PDB: 3BHN_A 3M | 96.71 | |
| PRK05282 | 233 | (alpha)-aspartyl dipeptidase; Validated | 96.53 | |
| PF02700 | 80 | PurS: Phosphoribosylformylglycinamidine (FGAM) syn | 95.91 | |
| COG4285 | 253 | Uncharacterized conserved protein [Function unknow | 95.69 | |
| KOG0026 | 223 | consensus Anthranilate synthase, beta chain [Amino | 95.31 | |
| cd03129 | 210 | GAT1_Peptidase_E_like Type 1 glutamine amidotransf | 94.14 | |
| PF06283 | 217 | ThuA: Trehalose utilisation; PDB: 4E5V_A 1T0B_A. | 93.58 | |
| PF04204 | 298 | HTS: Homoserine O-succinyltransferase ; InterPro: | 91.36 | |
| PRK05783 | 84 | hypothetical protein; Provisional | 91.28 | |
| cd03131 | 175 | GATase1_HTS Type 1 glutamine amidotransferase (GAT | 91.03 | |
| COG1828 | 83 | PurS Phosphoribosylformylglycinamidine (FGAM) synt | 90.49 | |
| PRK06423 | 73 | phosphoribosylformylglycinamidine synthase; Provis | 90.18 | |
| COG3155 | 217 | ElbB Uncharacterized protein involved in an early | 88.66 | |
| PF12818 | 282 | Tegument_dsDNA: dsDNA viral tegument protein; Inte | 88.52 | |
| TIGR01001 | 300 | metA homoserine O-succinyltransferase. The apparen | 86.02 | |
| cd03145 | 217 | GAT1_cyanophycinase Type 1 glutamine amidotransfer | 85.2 | |
| PRK05974 | 80 | phosphoribosylformylglycinamidine synthase subunit | 84.13 | |
| TIGR02069 | 250 | cyanophycinase cyanophycinase. This model describe | 80.28 |
| >PLN03206 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-281 Score=2678.57 Aligned_cols=1306 Identities=83% Similarity=1.341 Sum_probs=1198.8
Q ss_pred HHHHHHHhhhCCCcceEEEEEEEEEecCCCCCHHHHHHHHHHhcccCCCCcCCcchhhhhhhccCCceEEEEEecCCCcC
Q 000572 109 ELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFT 188 (1414)
Q Consensus 109 ~Ll~~l~~~~~~~V~~v~t~~~y~v~~~~~Ls~~~~~~l~~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~pr~g~~ 188 (1414)
.|++++++.....|.+|+++|||+|+++.+|++++.++|.|||.++|.+......++...+...+....+++|+||+||+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~pr~~~~ 81 (1307)
T PLN03206 2 ELLRKVQTKVSNDIVSIETEQCFNVGLESPLSAEKLETLKWLLRETFEPENLGTESFLEAKKSEGLNAVVVEVGPRLSFT 81 (1307)
T ss_pred hHHHHHhhhcCCCceEEEEEEEEEEEcCCCCCHHHHHHHHHHhccccCcccccccccccccccCCCceeEEEEeCCCCCC
Confidence 57788885556689999999999999988999999999999999766643222222221000111112379999999999
Q ss_pred ChhhhHHHHHHHHcCCCcCCeEEEEEEEEEecCCCCChhHHHHHHHhccccccccccccccccccccCCCCceEEEeccc
Q 000572 189 TAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVPEEVRFVPVME 268 (1414)
Q Consensus 189 ~~~s~~a~~i~~~~g~~~~~rie~~~~y~~~~~~~~~~~~~~~~~~~l~d~mt~~~~~~~~~~f~~~~~~~~~~~v~~~~ 268 (1414)
||||||||+|||+|||..|.||||+++|++.+....++++++++.++|||||||++|..+...|....+|+|+.+|++++
T Consensus 82 spwss~a~~i~~~~gl~~i~rier~~~~~~~~~~~~~~~~~~~~~~~~~drmte~~~~~~~~~~~~~~~p~~~~~v~~~~ 161 (1307)
T PLN03206 82 TAWSTNAVSICSACGLTEVTRLERSRRYLLFSSSPLDESQINAFAAMVHDRMTECVYPQPLTSFESGVVPEPVYTVPVME 161 (1307)
T ss_pred CcchhHHHHHHHHcCCcceEEEEeeEEEEEecCCCCCHHHHHHHHHhcCCCCcceecCCchHhhcCCCCCCCceEECCCC
Confidence 99999999999999999999999999999975323345678889999999999999998765665565899999999999
Q ss_pred CCHHHHHHHHHhCCCCCChhhHHHHHHHHHhhcCCCCCHHHHHHHHhhhccccccceeeeEEEEcCcccchhHHHHHHHH
Q 000572 269 NGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKST 348 (1414)
Q Consensus 269 ~~~~~l~~~~~~~gLal~~~el~~~~~~f~~~l~R~Pt~~El~~~~q~wSEHCrhk~F~~~~~~d~~~~~~~lf~~I~~~ 348 (1414)
.++++|+++|+++||||+++||+||++||++.|||||||+||+||||+||||||||||||+|+|||++++.+||+|||.|
T Consensus 162 ~~~~~L~~~~~~~gLAl~~~ei~~~~~~F~~~~~R~PTd~El~~~aq~~SEHCRHk~F~~~~~id~~~~~~sL~~mi~~t 241 (1307)
T PLN03206 162 EGRAALEEINKEMGLAFDEQDLDYYTRLFRDDIKRDPTNVELFDIAQSNSEHSRHWFFSGKLVIDGQPMPKTLFQMVKDT 241 (1307)
T ss_pred CCHHHHHHHHHhcCCcCCHHHHHHHHHHHhhhcCCCCcHHHHHHHHhhhhhccCcceeeeEEEEcCCcCCccHHHHHHHH
Confidence 99999999999999999999999999999977999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhcccccccchhcc
Q 000572 349 LQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHAT 428 (1414)
Q Consensus 349 ~~~~~~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAm 428 (1414)
.+.++++++++|.|||++|+++.+.+|+++.+++++.|..++++++++||+|||||||+|+||+||+||+||.|||+.||
T Consensus 242 ~~~~~~~~~~~~~Dns~~i~g~~~~~~~~~~~~~~~~~~~~~e~~~i~fK~ETHNHPTaIePf~GAATGvGG~IRD~~a~ 321 (1307)
T PLN03206 242 LKANPNNSVIGFKDNSSAIRGFVVQPLRPVSPGSPSPLAPVDRDLDILLTAETHNFPCAVAPYPGAETGAGGRIRDTHAT 321 (1307)
T ss_pred HHHCCCCceEEeeehhhhhccceeeEEeccCCCCCcceeEecCceEEEEEeccCCCCCccCCCCcccccCCceeeccccc
Confidence 99888999999999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCc
Q 000572 429 GRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQR 508 (1414)
Q Consensus 429 GrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~ 508 (1414)
||||+|+|+|++|+||+|++|+..+|||+.++++|++++++++|+.+++.|+++|+|+||+|+|+|++++|++.+++|++
T Consensus 322 GrGa~PiA~l~~~~~g~l~~~g~~~p~e~~~~~~p~~l~~~~~I~~~~~~G~s~YGN~~G~P~v~G~~~~F~~~~~~g~~ 401 (1307)
T PLN03206 322 GRGSFVVAGTAGYCVGNLRIEGSYAPWEDSSFVYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPNGER 401 (1307)
T ss_pred CCCceeeecceeEEecCCCCCCCcCccccccccCcccCCCHhHHhhccCCccccCCcccCCcccCcEEEEeccccccccc
Confidence 99999999999999999999999999998789999999999999999999999999999999999999989888777889
Q ss_pred cccCCceEEEEEEEeeeCcccccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHH
Q 000572 509 REWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRV 588 (1414)
Q Consensus 509 ~~~~~Plv~~~~vG~v~~~~i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~ 588 (1414)
++|++|+|+++++|.++++++.|..+++||+||++||+|||||+||+++||+.+++.+.++++++||++||+|||++|++
T Consensus 402 ~~~~kPim~ag~vG~~~~~~v~k~~~~~G~~vv~lGG~tgRdGigGat~SS~~~~~~s~~~d~~aVQ~GnP~~Ekklq~v 481 (1307)
T PLN03206 402 REWLKPIMFSGGIGQIDHTHLTKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMSQKLYRV 481 (1307)
T ss_pred cccCCCceEEEEEEEEcHHHcccCCCCCCCEEEEECCCcccccccchhhhhhhhCCccccccCCccccCCHHHHHHHHHH
Confidence 99999999999999999999988779999999999999999999999999999987777889999999999999999999
Q ss_pred HHHHHHhhccCCceEEEcCCCCcHHHHHHHHhcCCeEEEEeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHH
Q 000572 589 VRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSI 668 (1414)
Q Consensus 589 i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~~~Ga~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i 668 (1414)
|++|+++++.++|++|||+|||||+++++||++..|++|||++||+++++|+|+|||+|||||||+++|+|+++++|+++
T Consensus 482 i~ac~e~~~~~~I~~i~D~GAGGls~a~~Ela~~~G~~i~Ld~Vp~~e~gmsp~EI~~SESQERm~l~V~p~~~~~f~~i 561 (1307)
T PLN03206 482 VRACVEMGEDNPIVSIHDQGAGGNCNVVKEIIYPKGAEIDIRAVVVGDHTLSVLEIWGAEYQEQDALLIKPESRDLLQSI 561 (1307)
T ss_pred HHHHHHhhcCCCEEEEEecCCchHHHhHHHHhhcCceEEEhhhCcCCCCCCCHHHHHHhHHhhhheeeECcccHHHHHHH
Confidence 99999999999999999999999999999999888999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCeEEEEEEEcCCeEEEEeCcccccccCCCCCCCCCeEEcchhhhhCCCCCceecccccCCCCCCCCCCCCCCHH
Q 000572 669 CERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVM 748 (1414)
Q Consensus 669 ~~~~~~~~~vIG~vt~~~~l~l~~~~~~~~~~~~~~~~~~~~~dl~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~ 748 (1414)
|++++|++++||+||++++++|.+..+.+.+..++...++.++|||+++|++++|+++++.+++++...+++.+...+++
T Consensus 562 ~~re~~~~~vVG~vT~~~rl~v~~~~~~~~~~~~g~~~~~~~~dlp~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (1307)
T PLN03206 562 CDRERCSMAVIGTIDGSGRVVLVDSAAPEKCEANGLPPPPPAVDLDLEKVLGDMPQKTFEFKRVANKLEPLDIPPGITVM 641 (1307)
T ss_pred HHHcCCCeEEEEEEecCCeEEEEECCccccccccccccCceeEEEEhHHhcCCCCccccccccccccccccccCCCcCHH
Confidence 99999999999999999999999863222233344445689999999999999999999987765544444444456899
Q ss_pred HHHHHHHcCCCCCcchhhhhccccccCcccccccccCCCCCCcCcEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHH
Q 000572 749 DSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARL 828 (1414)
Q Consensus 749 ~~l~~vL~~p~VaSK~~l~~~~D~~V~g~tv~~p~vGp~~~pg~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~ 828 (1414)
+++++||++||||||+||++||||+|||+|||||+|||||.|++|+||++..+.+.+|+|||+|++|+++.+|||+||++
T Consensus 642 ~~l~~vL~~pnVaSK~~l~~~~D~~V~g~vv~~~~vGp~q~p~aD~aV~~~~~~~~~g~a~s~G~~p~~~~~dp~~ga~~ 721 (1307)
T PLN03206 642 DALKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVIAQTHTGLTGGACAIGEQPIKGLVDPKAMARL 721 (1307)
T ss_pred HHHHHHhcCCccccccchhhhcccccCceEcccCccCCccCCCcceeEEEEeCCCCeEEEEEecCCCceeeeCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876545899999999999999999999999
Q ss_pred HHHHHhhchhccCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCc
Q 000572 829 AVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGS 908 (1414)
Q Consensus 829 AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~ppt 908 (1414)
||+||++||+|++...+.++.+|.||||++++|++++.++++++|++++|++||||++||||||||+++|+++.+++|||
T Consensus 722 AV~Ea~~Nlvaa~~~~l~di~~s~nw~~~~~~p~~~~~l~~av~g~~~~~~~Lgipii~GKdSls~~~~~~~~~~~~P~T 801 (1307)
T PLN03206 722 AVGEALTNLVWAKVTALSDVKASGNWMYAAKLDGEGADMYDAAVALRDAMIELGVAIDGGKDSLSMAAQAGGEVVKAPGN 801 (1307)
T ss_pred HHHHHHhHhhccCCCcHHHeEEEcChhHhhcCCCCHHHHHHHHHHHHHHHHHcCCCcccCeecCCCCCCCCCCCcCCCCC
Confidence 99999999999877559999999999999999999999999999999999999999999999999998876667889999
Q ss_pred EEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCccccchHHHHHHhhhcCCCCCCCCChHHHHHHHHHHHHHHhccC
Q 000572 909 LVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDEL 988 (1414)
Q Consensus 909 lvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~LGGS~la~~~~~~~~~~p~v~d~~~lk~~~~~v~~l~~~g~ 988 (1414)
|+||++|.|+|+++++||++|.+||..++|||+|.++.+||||+|++.++++++.+|+++|++.+|++|+++++|+++|+
T Consensus 802 LvIs~~~~v~Dv~~~vtp~lK~~G~~vlL~idlG~~~~~LGGS~~~q~~~~~g~~~Pdv~d~~~lK~~f~av~~Li~~gl 881 (1307)
T PLN03206 802 LVISAYVTCPDITKTVTPDLKLGDDGVLLHVDLGKGKRRLGGSALAQAYDQIGDDCPDLDDVAYLKKAFEATQDLIAKRL 881 (1307)
T ss_pred EEEEEEEEcCCcccCcChhhcCCCCEEEEEEecCCCCcCccccHHHHHhCccCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 99999999999999999999999986677799999999999999999999889999999889999999999999999999
Q ss_pred ceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCCCchHHHhcccccceEEEEecCCHHHHHHHHHHcCCCEEEEEEEeC
Q 000572 989 VSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNS 1068 (1414)
Q Consensus 989 v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~~~~~~~LFsE~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~ 1068 (1414)
|+|+||+|||||+++|+||||++++|++|+++....++...||+|++|+|++|++++.++|+++|+++|+++++||+|++
T Consensus 882 V~A~HDvSdGGL~~ALaEMAfag~~G~~Idl~~~~~~~~~~LFsEs~G~VieV~~e~~~~v~~~l~~~gi~~~vIG~vt~ 961 (1307)
T PLN03206 882 ISAGHDISDGGLVVTLLEMAFAGNCGINVDLPSSGHSAFETLFAEELGLVLEVSRKNLDAVMEKLAAAGVTAEVIGQVTA 961 (1307)
T ss_pred eeEEEeCCcCHHHHHHHHHHhhcCCcEEEEeCCccchHHHHHhCCCccEEEEEehhHHHHHHHHHHHCCCCeEEEEEECC
Confidence 99999999999999999999999999999997533345778999999999999999999999999999999999999998
Q ss_pred CCcEEEEECCEEEEeccHHHHHHHhhhccHHHHhhhccccchhhhhhcccccCCCceeeeeCCCcchhhccccCCCCEEE
Q 000572 1069 SHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVA 1148 (1414)
Q Consensus 1069 ~~~l~i~~~g~~i~~~~~~~L~~~W~~~s~~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~kVa 1148 (1414)
++.++|..+|+.+++.++++|+++|+++||+||++|++|.|+++|++.+++...+.++++|+|..+......+..+|||+
T Consensus 962 ~~~i~I~~~g~~~l~~~l~eL~~~W~~tS~~le~l~~~~~~~~~e~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~pkVa 1041 (1307)
T PLN03206 962 SPLIEVKVDGATCLSEKTASLRDMWEETSFQLEKLQRLESCVAQEKEGLKSRKAPTWKLSFTPAFTDKKIMNATSKPKVA 1041 (1307)
T ss_pred CCeEEEEECCEEEEecCHHHHHHHHhccChhhhhccCCchhhhHHHhhhhccCCceeecccCccccccccccCCCCCeEE
Confidence 88888888998899999999999999999999999999999999998888766667888898877653334466799999
Q ss_pred EEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHH
Q 000572 1149 VIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEF 1228 (1414)
Q Consensus 1149 Il~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f 1228 (1414)
||++||+||+++|++||+++||++++|||+||..+...|++|++|+|||||||||++++|++||+++++|+.++++|++|
T Consensus 1042 Vl~~pGtN~~~e~~~Af~~aGf~~~~V~~~dl~~~~~~L~~~~glv~pGGFSyGD~l~sg~~wa~~i~~n~~~~~~~~~f 1121 (1307)
T PLN03206 1042 IIREEGSNGDREMAAAFYAAGFEPWDVTMSDLLNGRISLDDFRGIVFVGGFSYADVLDSAKGWAGSIRFNEPLLQQFQEF 1121 (1307)
T ss_pred EEECCCCCCHHHHHHHHHHcCCceEEEEeeecccccccccceeEEEEcCcCCCccccchHHHHHHHHHhChHHHHHHHHH
Confidence 99999999999999999999999999999999988888999999999999999999999999999999999999999999
Q ss_pred HhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEEEEE
Q 000572 1229 YKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVW 1308 (1414)
Q Consensus 1229 ~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~~~ 1308 (1414)
++|+|+|+||||||||+|+++||||+.+.......+..+.+|+|++|.|+||||||++++|.+++||||++|+|+++|+|
T Consensus 1122 ~~~~d~~~LGICNGfQiL~~lgllPg~~~~~~~~~~~~e~~p~l~~N~s~rfesr~v~v~V~~s~si~l~~~~G~~l~i~ 1201 (1307)
T PLN03206 1122 YNRPDTFSLGVCNGCQLMALLGWVPGPQVGGGLGAGGDPSQPRFVHNESGRFECRFTSVTIEDSPAIMLKGMEGSTLGVW 1201 (1307)
T ss_pred HhCCCceEEEEcHHHHHHHHcCCCCCCccccccccccccCCceeeecCCCCeEEeceEEEECCCCChhhcccCCCEEEEE
Confidence 98889999999999999999999996532110001234689999999999999999999999899999999999999999
Q ss_pred EeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccccccCCCC
Q 000572 1309 AAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWY 1388 (1414)
Q Consensus 1309 ~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~~~~ 1388 (1414)
++||||||+|++++.+++|.++|||++||+|.+|++|++||+|||||+++||||||+|||||||||||||++++||||||
T Consensus 1202 vaHgEGr~~~~~~~~l~~l~~~gqva~rY~d~~g~~t~~yP~NPNGS~~~IAGi~s~dGRvlgmMpHPER~~~~~q~~~~ 1281 (1307)
T PLN03206 1202 AAHGEGRAYFPDESVLDEVLKSNLAPVRYCDDDGEPTEQYPFNPNGSPLGIAALCSPDGRHLAMMPHPERCFLMWQFPWY 1281 (1307)
T ss_pred EEcCCCCeecCCHHHHHHHHhcCeEEEEEeCCCCCccCCCCCCCCCChhhceeeECCCCCEEEEcCCHHHhhhhhhCCCC
Confidence 99999999998888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHhhC
Q 000572 1389 PKNWNVDKKGPSPWLKMFQNAREWCS 1414 (1414)
Q Consensus 1389 p~~~~~~~~~~spw~~~F~na~~~~~ 1414 (1414)
|++|...+...|||++||+||++||.
T Consensus 1282 p~~~~~~~~~~spw~~~F~na~~w~~ 1307 (1307)
T PLN03206 1282 PKEWGVDPAGPSPWLKMFQNAREWCE 1307 (1307)
T ss_pred CccccccCCCCCcHHHHHHHHHHHhC
Confidence 99884333458999999999999984
|
|
| >KOG1907 consensus Phosphoribosylformylglycinamidine synthase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-278 Score=2409.22 Aligned_cols=1286 Identities=55% Similarity=0.912 Sum_probs=1184.0
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHhhhCCCcceEEEEEEEEEecCCC---CCHHHHHHHHHHhcccCCCCcCCcchhhhhhh
Q 000572 94 VHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDSR---ISTKKLEVLKWLLQETYEPENLGTESFLEKKK 170 (1414)
Q Consensus 94 ~~~~g~~als~~~~e~Ll~~l~~~~~~~V~~v~t~~~y~v~~~~~---Ls~~~~~~l~~LL~~~~~~~~~~~~~~~~~~~ 170 (1414)
+.+|.++... ..+++++.+.. ....+++.++||++.+... .+..+...|.|||+.++.. .+..++++..+
T Consensus 9 v~~y~~a~~~----~~~~k~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~lnl~~~l~~~~~~-sl~~~s~l~~~- 81 (1320)
T KOG1907|consen 9 VKLYAKAVEV----DQILKSFEEEF-VRGVSVSVEYCYHVLTQEQLLYSSALDKLNLTWLLHSPLST-SLWKESQLHPE- 81 (1320)
T ss_pred HHHhhcccch----HHHHHHHHHHh-hhhhehhhhhhhHHHHHHHHHhhhhhhHHHHHHHhcccccc-ccccchhcCCC-
Confidence 3455555554 44555555532 3466788999998864332 1122222278999887776 34445555332
Q ss_pred ccCCceEEEEEecCCCcCChhhhHHHHHHHHcCCCcCCeEEEEEEEEEecCCCCChhHHHHHHHhccccccccccccc--
Q 000572 171 QKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEK-- 248 (1414)
Q Consensus 171 ~~~~~~~~i~v~pr~g~~~~~s~~a~~i~~~~g~~~~~rie~~~~y~~~~~~~~~~~~~~~~~~~l~d~mt~~~~~~~-- 248 (1414)
... .|||+||+||+|||||||++||++||+++|+||||++||++..+.+..+.+.+.+..++||||||++|...
T Consensus 82 ---~~~-~ievgPR~~~~tpwstna~nI~~~cG~~dV~RiErg~rylv~~~e~~~e~~~~~f~~~~~DRMTe~ly~~~p~ 157 (1320)
T KOG1907|consen 82 ---GTK-NIEVGPRTGTITPWSTNATNIFEVCGYKDVERIERGIRYLVKFKEPLLENDVKEFLEILYDRMTEALYTNEPP 157 (1320)
T ss_pred ---Ccc-eEEEeccCCcccccccchhHHHHhcChHHHHHHhhceeEEEEecCccchHHHHHHHHHHHHHHHHHHhccCCC
Confidence 223 69999999999999999999999999999999999999999876665577888999999999999999654
Q ss_pred -cccccccCCCCceEE---EecccCCHHHHHHHHHhCCCCCChhhHHHHHHHHHhhcCCCCCHHHHHHHHhhhccccccc
Q 000572 249 -LTSFETSVVPEEVRF---VPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHW 324 (1414)
Q Consensus 249 -~~~f~~~~~~~~~~~---v~~~~~~~~~l~~~~~~~gLal~~~el~~~~~~f~~~l~R~Pt~~El~~~~q~wSEHCrhk 324 (1414)
..+|++. +|++..+ ++....++++|+++|+|+||||++.||+||.+.|.++++|||||||||||||+||||||||
T Consensus 158 ~~~~Fd~~-~p~~~v~~~~~p~~~~~k~~L~~aNqelGLAld~~dldyy~~~f~~~~kR~PTdVELFd~aQsnSEHsRHw 236 (1320)
T KOG1907|consen 158 TMVSFDDE-EPKPQVEVVFVPDKQEGKQALEKANQELGLALDQLDLDYYYDLFVEEVKRNPTDVELFDFAQSNSEHSRHW 236 (1320)
T ss_pred cccccccC-CCCccceeeeccchhhHHHHHHHHHHHhccccCcccHHHHHHHHHHHhcCCCCceeeeeeccccchhhhhh
Confidence 4689877 6666444 4557889999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEcCcccchhHHHHHHHHhccCCCCceeeeccCcceeecCCcc-cccccCCCCCccccccCCceEEEEEecccC
Q 000572 325 FFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVK-QLRPVQPGSRCQLSESSQDLDVLFTAETHN 403 (1414)
Q Consensus 325 ~F~~~~~~d~~~~~~~lf~~I~~~~~~~~~~~~~g~~Ddaavi~~~~~~-~~~~~~~g~~~~~~~~~~~~~i~~~vEthn 403 (1414)
||+++|+|||++++.+||+|||+|+..++++.+++|+||+++|+|+... +|+|. +..+......+...+++|+||||
T Consensus 237 fF~g~~~IDg~k~d~SL~kmIr~T~~~n~~ntiiafsDNssa~~gf~~~~~~~P~--s~v~~~~~~~~~~~ll~~aETHN 314 (1320)
T KOG1907|consen 237 FFRGDWTIDGRKQDKSLFKMIRNTHDSNNDNTIIAFSDNSSAIRGFNSVTRFAPN--STVSPWIVIFEPSDLLFKAETHN 314 (1320)
T ss_pred eeccceEEecccCchHHHHHHHHHHhcCCCCceEEeccchHHhhccccceeeccc--cccccceeecCCcceEEEeeccC
Confidence 9999999999999999999999999999999999999999999997655 47763 33455555567888999999999
Q ss_pred CCCCCCcHHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Q 000572 404 FPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDY 483 (1414)
Q Consensus 404 ~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~ 483 (1414)
|||++.||+||+||.||.|||+.|+|||+.++|+|.+||||++++|++.+|||+.+|+||.++++|++||.++..|.+||
T Consensus 315 ~PtAVsPfpGA~TGtGGrIRD~~atGrGs~~~agtaGysvg~LnipG~~qPwE~l~f~yP~~iA~pl~ImIEAsnGaSdy 394 (1320)
T KOG1907|consen 315 HPTAVSPFPGATTGTGGRIRDEGATGRGSYEIAGTAGYSVGDLNIPGYKQPWEDLDFGYPYHIASPLDIMIEASNGASDY 394 (1320)
T ss_pred CCcccCCCCCCccCCCceeeccccccccceeeecccccccccccCCCCCCCCcccccCCccccCCHHHHHhhCcCChhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhCCeeeeeeeEEeccc--cCCCCccccCCceEEEEEEEeeeCcccccCCCCCCCEEEEEccCCCcccccHHHHHHhh
Q 000572 484 GNKFGEPLIQGYTRTFGMR--LPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMV 561 (1414)
Q Consensus 484 ~n~~GvplvgG~t~s~~~~--~~~g~~~~~~~Plv~~~~vG~v~~~~i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~ 561 (1414)
+|+||.|+|.|++++|..+ ..+|++++|+||||+++++|.|++.++.|..+.||.+|+++|||.+|+|+||+++||+.
T Consensus 395 gNkFGeP~I~Gy~rtfg~~v~~~~gerrey~KPIMfsgGiG~i~~~~~~K~~~apg~~likiGGp~yrIG~GGGAASSv~ 474 (1320)
T KOG1907|consen 395 GNKFGEPVISGYARTFGMRVLLENGERREYHKPIMFSGGIGTIRKQHARKEPIAPGQLLIKIGGPVYRIGVGGGAASSVV 474 (1320)
T ss_pred cccccchhhhhhhhhhcccccccCccccccccceEeecccCccCHHHhhcCCCCCCCEEEEecCceEEEecccchhhhhh
Confidence 9999999999999999888 56789999999999999999999999988889999999999999999999999999999
Q ss_pred hCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCCCc
Q 000572 562 SGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTL 639 (1414)
Q Consensus 562 ~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~~l 639 (1414)
+++.++++||++||||||+|++++|+++++|.++++.++|.||||+||||++++|+||.+ ++|++|+.+.+++.+++|
T Consensus 475 ~G~g~aeLDFaaVQRGdaEM~~kl~rVvrAC~~lge~NpI~sIHDqGAGGn~NvlkELV~~~~~Ga~~~~r~~~~gdpsm 554 (1320)
T KOG1907|consen 475 QGEGSAELDFAAVQRGDAEMERKLQRVVRACAELGENNPIQSIHDQGAGGNGNVLKELVEDNDLGATFDSRTFQLGDPSM 554 (1320)
T ss_pred cCCCccccchHHhhcCCHHHHHHHHHHHHHHHHhcCCCceeEeeccCCCccccccHhhccccCCccEEEeeeeecCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999 599999999999999999
Q ss_pred cHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCCeEEEEeCcccccccCCCCCCCCCeEEcchhhhh
Q 000572 640 SVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVL 719 (1414)
Q Consensus 640 ~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~l~~~~~~~~~~~~~~~~~~~~~dl~~~~l~ 719 (1414)
+|+|||++|+|||+++.|++++++.|+.||+|++|+++|||++|.++++++.++. ..++++||++..|+
T Consensus 555 S~~EiW~aEyQE~~allv~a~~l~~le~IckRERcp~svVG~vt~eqR~~l~d~~-----------~~~~aidl~~~~ll 623 (1320)
T KOG1907|consen 555 SPMEIWCAEYQENYALLVKAEDLDILESICKRERCPVSVVGEVTGEQRVILLDKL-----------AKETAIDLEMRQLL 623 (1320)
T ss_pred CHHHHhhhhhhhcceeeeCHHHHHHHHHHHHhccCCeeEEEEEccCceEEEecCC-----------CCCCccCCchHhhc
Confidence 9999999999999999999999999999999999999999999999999998852 35889999999999
Q ss_pred CCCCCceecccccCCCCCCCCCCCCCCHHHHHHHHHcCCCCCcchhhhhccccccCcccccccccCCCCCCcCcEEEEEe
Q 000572 720 GDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQ 799 (1414)
Q Consensus 720 ~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~vL~~p~VaSK~~l~~~~D~~V~g~tv~~p~vGp~~~pg~DaAVi~~ 799 (1414)
|++|+|.|+.++.+..++++++|+...+.+||+|||+.|+|+||+||++++||||+|+++|||||||||.|.+|+||+..
T Consensus 624 G~~pK~s~~l~~~~~~lk~l~lp~~~~l~dAl~RVL~LpsV~SKrfLttkvDRsVtGLiaqqQ~VGPlqvplADvavt~~ 703 (1320)
T KOG1907|consen 624 GKPPKMSRKLKRAPRVLKKLELPSGLTLRDALERVLRLPSVASKRFLTTKVDRSVTGLIAQQQCVGPLQVPLADVAVTAT 703 (1320)
T ss_pred CCCccccccccccccccccccCCCCChHHHHHHHHhccccccccceeeeeccchhhheeehhhccCcccccceeeeEEEE
Confidence 99999999999888888888889999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHH
Q 000572 800 TYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMI 879 (1414)
Q Consensus 800 ~~~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~~~~gl~eac~ 879 (1414)
++...+|.|+++|++|..+.+||.++||++|+|++.||+++-...+.+|++|.||||++++|+|.++|++++++++....
T Consensus 704 S~~~~tG~A~amGeqPik~Lida~a~ARm~VaE~l~NLv~a~i~sL~dvK~SgNWM~aak~~GEGarlydAv~aL~~~L~ 783 (1320)
T KOG1907|consen 704 SHFDTTGEAVAMGEQPIKALIDAAASARMCVAEALMNLVAAKITSLKDVKLSGNWMWAAKHPGEGARLYDAVQALCLGLC 783 (1320)
T ss_pred EEeccccccccccccchHhhhCHHHHhHHHHHHHHHHhHhhcccchhheeeccceeecccCCCcchHHHHHHHHHHHHHH
Confidence 87766899999999999999999999999999999999999999999999999999999999999999999999995555
Q ss_pred HhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCC---cEEEEEEcCCCccccchHHHHHH
Q 000572 880 ELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDD---GILLHIDLAKGKRRLGGSALAQV 956 (1414)
Q Consensus 880 ~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd---~~li~v~lg~~~~~LGGS~la~~ 956 (1414)
++||+|.||||||||..+|+++.|++|.||+||++++|+|+.+++||++|+++| ..|+|||++.++.+||||+|+|+
T Consensus 784 eLgiAIdgGKDSlSMa~k~~ge~VkaPgtLvIsayapc~dv~k~vtP~Lk~~~~gs~~~Ll~i~l~~~k~rLGgSaLaQv 863 (1320)
T KOG1907|consen 784 ELGIAIDGGKDSLSMAMKWDGEVVKAPGTLVISAYAPCPDVTKTVTPDLKANVDGSKTSLLWIDLANSKMRLGGSALAQV 863 (1320)
T ss_pred HhceeecCCccchhhheeeCCeEEecCceEEEEeeccCCCcceeecccccCCCCCCceEEEEEEccccccccchHHHHHH
Confidence 999999999999999999999999999999999999999999999999997433 24899999999999999999999
Q ss_pred hhhcCCCCCCCCChHHHHHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCC--CCchHHHhcccc
Q 000572 957 FDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSE--GNSLFQTLFAEE 1034 (1414)
Q Consensus 957 ~~~~~~~~p~v~d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~--~~~~~~~LFsE~ 1034 (1414)
|+|+|+++|++++.+.++++|+.+++|+.+++|.|+||+|||||++|+.||||||++|++||++.. +......||+|+
T Consensus 864 y~QiG~d~Pdl~~~~~lk~~f~~vqqL~~~~ii~AgHD~SDGGLlvt~lEMAfag~~gi~idl~~~~~~~~~~~~LF~EE 943 (1320)
T KOG1907|consen 864 YSQIGDDCPDLDNFDELKKFFSVVQQLLNEGIILAGHDISDGGLLVTLLEMAFAGNVGIEIDLDSPNQNIKLFDILFAEE 943 (1320)
T ss_pred HHHhCCCCCCccchHHHHHHHHHHHHHHhcCceeecccccCCchhHHHHHHHhhcccceEEecCCccccccHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999863 235566799999
Q ss_pred cceEEEEecCCHHHHHHHHHHcCCCEEEEEEE----eCCCcEEEEECCEEEEeccHHHHHHHhhhccHHHHhhhccccch
Q 000572 1035 LGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQV----NSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCV 1110 (1414)
Q Consensus 1035 ~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v----~~~~~l~i~~~g~~i~~~~~~~L~~~W~~~s~~~~~~~~~~~~~ 1110 (1414)
.|.|++|...++++|+++|+++|+++..||.+ +.+..+.++.+|..+++.++.+|++.|+.|||+||++|+||+|+
T Consensus 944 lG~v~evs~~dl~~v~~~~~~~gv~~~~ig~~~~~~g~~~~i~~~~~g~~~~~~~~s~L~~~We~tsy~l~klq~npeca 1023 (1320)
T KOG1907|consen 944 LGAVLEVSDTDLEKVLEIFSEAGVKCEYIGKASAVFGQDAHIKISVNGHLILNEKLSDLREEWELTSYELQKLQDNPECA 1023 (1320)
T ss_pred hCeEEEeccccHHHHHHHHHhcCCcceeeeeeccccCCCceEEEecCCeEEecchHHHHHHHHHHhHHHHHHHhhCHHHH
Confidence 99999999999999999999999999999976 23466888999999999999999999999999999999999999
Q ss_pred hhhhhcccccCCCceeeeeCCCcchhhccc-cCCCCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccC
Q 000572 1111 ESEKEGLKSRCEPLWKLSFTPSLTDEKYMN-ATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDE 1189 (1414)
Q Consensus 1111 ~~e~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~ 1189 (1414)
++|++.++++..|+|.++|+|+.+...... .+.+||||||+++|+|+++||++||..+||++++|+|+||+.+...|++
T Consensus 1024 e~e~~~i~~~~~p~~~l~~~P~~~~~~~~~l~s~~PkVAilREeGvNg~rEMa~af~~AgF~~~DVtmtDlL~G~~~ld~ 1103 (1320)
T KOG1907|consen 1024 EVERECIKDNYDPQYDLYYNPAFIHNEQLFLSSTAPKVAILREEGVNGDREMAAAFYAAGFETVDVTMTDLLAGRHHLDD 1103 (1320)
T ss_pred HHHHhhcccccCCCCceeeCchhhhHHHHhhhcCCCceEEeeccccccHHHHHHHHHHcCCceeeeeeehhhcCceeHhH
Confidence 999999999889999999999877654433 4668999999999999999999999999999999999999999999999
Q ss_pred cCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCC
Q 000572 1190 FRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQ 1269 (1414)
Q Consensus 1190 ~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~ 1269 (1414)
|.||++||||||+|++++++|||+++++|+.++.+|.+|++|+|+|.||||||||+|+.+|+|+.+ ...|
T Consensus 1104 frGlaf~GGFSYaDvLgSakGWAasil~ne~v~~QF~~F~~R~DtFslGiCNGCQlms~Lg~i~p~----------~~~~ 1173 (1320)
T KOG1907|consen 1104 FRGLAFCGGFSYADVLGSAKGWAASILFNESVRSQFEAFFNRQDTFSLGICNGCQLMSRLGWIGPE----------VGKW 1173 (1320)
T ss_pred hcceeeecCcchHhhhccccchhhheeeChhHHHHHHHHhcCCCceeeecccHhHHHHHhcccCcc----------ccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999822 2568
Q ss_pred Cee--eecCCCceEEeeEEEEEccCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCccc
Q 000572 1270 PRF--VHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEV 1347 (1414)
Q Consensus 1270 p~l--~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~ 1347 (1414)
|.+ .+|.|+||||||..|+|+.+.|+||.||+|+++++|++||||||+|++...++++.++|++++||||+.|++|+.
T Consensus 1174 p~~~l~~Nes~rfE~r~~~vkI~~~~SIml~gM~gs~LgvwvAHGEGRa~f~~e~~~e~~~~~gl~~iryvdd~g~~te~ 1253 (1320)
T KOG1907|consen 1174 PDVFLDHNESGRFECRFGMVKIESNVSIMLSGMAGSVLGVWVAHGEGRATFRSEQNLEHLKKEGLVCIRYVDDYGNVTEL 1253 (1320)
T ss_pred CceeeecccccceeeeEEEEEeCCCchhhhccccCCceeeEEEecccceecCcHHHHHHHhhcCeeEEEEecCCCCEeee
Confidence 864 599999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred CCCCCCCCcCceeEEEcCCCcEEEEccCCccccccccCCCCCCCCCCCCCCCChhHHHHHHHHHhhC
Q 000572 1348 YPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS 1414 (1414)
Q Consensus 1348 yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~~ 1414 (1414)
||+|||||+++||||||+|||||+|||||||++..|||+|+|..|..+....|||+|||||||+||+
T Consensus 1254 yPfNpNGS~~gIAgicSpdGRhLAMMPHpER~~l~~q~~~yP~s~~~e~~~~sPWirmF~nAr~W~~ 1320 (1320)
T KOG1907|consen 1254 YPFNPNGSPDGIAGICSPDGRHLAMMPHPERVFLMWQWSYYPWSKRVEWGGLSPWIRMFRNARNWCG 1320 (1320)
T ss_pred cccCCCCCcccceeeeCCCCCeeeccCCchheeeeeecccCCccccccccCCChHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999886554478999999999999995
|
|
| >TIGR01735 FGAM_synt phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-263 Score=2539.60 Aligned_cols=1287 Identities=51% Similarity=0.823 Sum_probs=1165.8
Q ss_pred EcCCCCCCHHHHHHHHHHHHhhhCCCcceEEEEEEEEEecCCCCCHHHHHHHHHHhcccCCCCcCCc-chhhhhhhccCC
Q 000572 96 FYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYEPENLGT-ESFLEKKKQKGL 174 (1414)
Q Consensus 96 ~~g~~als~~~~e~Ll~~l~~~~~~~V~~v~t~~~y~v~~~~~Ls~~~~~~l~~LL~~~~~~~~~~~-~~~~~~~~~~~~ 174 (1414)
|+|.++||+|+.++|++++++ .++.|.+|++++||+|+++++|++++.++++.+|.+. + .+.. .... +
T Consensus 2 ~~~~~~~~~~~~~~l~~~~~~-~~~~~~~v~~~~~~~v~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~------~- 70 (1310)
T TIGR01735 2 LRGPSALSGFRLEKLLQKLQT-KVPELTGVYAEFCYFVGWESALTADEEEKLQLLLLAG--S-VLEPPQSPL------G- 70 (1310)
T ss_pred cCCcccCCHHHHHHHHHHHHh-cCCCceEEEEEEEEEEEcCCCCCHHHHHHHHhhcccC--C-ccccccCcC------C-
Confidence 679999999999999999998 5778999999999999988899999999988655431 1 1110 1111 1
Q ss_pred ceEEEEEecCCCcCChhhhHHHHHHHHcCCCcCCeEEEEEEEEEecCCCCChhHHHHHHHhccccccccccccccc---c
Q 000572 175 KAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKLT---S 251 (1414)
Q Consensus 175 ~~~~i~v~pr~g~~~~~s~~a~~i~~~~g~~~~~rie~~~~y~~~~~~~~~~~~~~~~~~~l~d~mt~~~~~~~~~---~ 251 (1414)
.|+|||+||+||+||||||||+||++|||..|.||||+++|+|.+....++++++++.+.|||||||+++..+.. .
T Consensus 71 -~~~~~v~pr~g~~~p~ss~a~~i~~~~g~~~v~rie~~~~y~~~~~~~~~~~~~~~~~~~l~d~m~e~~~~~~~~~~~~ 149 (1310)
T TIGR01735 71 -RGLLEVGPRLGTISPWSSKATSIARNCGLAKVDRIERGRRYYLSGAHPLSEEQEAQAAALLHDRMTESVLPHEIEAFEL 149 (1310)
T ss_pred -ceEEEEEcCCCcCChHHHHHHHHHHHcCCccccEEEEEEEEEEecCCCCCHHHHHHHHHHhCCCeEEEecCCchhhhhh
Confidence 148999999999999999999999999999999999999999976323345778999999999999999977653 4
Q ss_pred ccccCCCCceEEEecccCCHHHHHHHHHhCCCCCChhhHHHHHHHHHhhcCCCCCHHHHHHHHhhhccccccceeeeEEE
Q 000572 252 FETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIV 331 (1414)
Q Consensus 252 f~~~~~~~~~~~v~~~~~~~~~l~~~~~~~gLal~~~el~~~~~~f~~~l~R~Pt~~El~~~~q~wSEHCrhk~F~~~~~ 331 (1414)
|... +|.++.+|++++.++++|+++|+++||||+++||+||++||++ |||||||+||+||+|+||||||||||||+|+
T Consensus 150 ~~~~-~~~~~~~v~~l~~~~~~L~~~~~~~gLaLs~~e~~~i~~~F~~-l~R~PtdvEl~~~aq~wSEHCrhk~F~~~~~ 227 (1310)
T TIGR01735 150 FSVP-EPLNLTTIDVLGGGRLALEKANQELGLALDEDEIDYLTKRFQE-LQRNPSDVELMMFAQANSEHCRHKIFNADWI 227 (1310)
T ss_pred ccCC-CCCCcceeccccCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHhhhhcCCccCCCcee
Confidence 4444 5667889999999999999999999999999999999999986 9999999999999999999999999999999
Q ss_pred EcCcccchhHHHHHHHHhccCCCCceeeeccCcceeecCCcccccccCCCCCccccccC-CceEEEEEecccCCCCCCCc
Q 000572 332 IDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESS-QDLDVLFTAETHNFPCAVAP 410 (1414)
Q Consensus 332 ~d~~~~~~~lf~~I~~~~~~~~~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~-~~~~i~~~vEthn~p~~idP 410 (1414)
|||+++++++|+|||++++..+++++++|+||||||++....+|.|..+.. ..+.... ++++|+||+|||||||+++|
T Consensus 228 id~~~~~~slf~~i~~t~~~~~~~~~~~~~dNa~vi~~~~~~~~~~~~~~~-~~~~~~~e~~~~i~~k~Ethnhpt~i~P 306 (1310)
T TIGR01735 228 IDGKKQDKSLFQMIKSTHEANPENTVSAYKDNSSVIEGHKVGRLRPDPPTR-PEYRQHQEDLVHILMKVETHNHPTAIAP 306 (1310)
T ss_pred ecCcccchhHHHHHHhhhhcCCCceEEEecCcEEEEEcccccccccccccc-cccccccccceEEEEEeccCCCCCccCc
Confidence 999999999999999998888899999999999999998888887753222 2334333 45999999999999999999
Q ss_pred HHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCe
Q 000572 411 YPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEP 490 (1414)
Q Consensus 411 ~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~Gvp 490 (1414)
|+||+||+||++||++||||||+|+|++++||||||++|+..+|||+. +++|+++.+|++||.+.++|+++|||+||+|
T Consensus 307 y~GAatgvgg~iRD~~a~GrGa~PiA~~d~l~fg~p~~~~~~~~~e~~-~~~P~~~~~p~~Il~e~~~G~~~~gn~~G~P 385 (1310)
T TIGR01735 307 FPGASTGAGGEIRDEGATGRGAKPKAGLTGFCVSNLNIPGLEQPWEDP-FQKPERIASPLDIMIEAPLGAAAFNNEFGRP 385 (1310)
T ss_pred hhhHHHHHhHhHhChhhhCCCCeeeeeeeeeecCCCCCCCCCCccccc-cCCchhhccHHHHHHHHHHHHHHHhhhhCCc
Confidence 999999999999999999999999999999999999999988999965 8999999999999999999999999999999
Q ss_pred eeeeeeEEeccc--cCCCCccccCCceEEEEEEEeeeCcccccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCc
Q 000572 491 LIQGYTRTFGMR--LPSGQRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAD 568 (1414)
Q Consensus 491 lvgG~t~s~~~~--~~~g~~~~~~~Plv~~~~vG~v~~~~i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~ 568 (1414)
+|+|++++|... ..+|+++++++|+|+++++|.+++.++.+...++||+||++|+++||||+||+++||+.++..+++
T Consensus 386 ~v~G~vs~f~~~~~~~~g~~~~~~~P~~~~g~vG~i~~~~~~~~~~~~G~~ivllGg~~~rdglgGs~~ss~~~g~~~~~ 465 (1310)
T TIGR01735 386 NLLGYFRTFELKASLPGGQVRGYHKPIMLAGGIGSIDAEHIQKGEIEPGALLIVLGGPAMLIGLGGGAASSMVSGTNTAD 465 (1310)
T ss_pred ccceeeeeccccccccccccccccCCccEEEEEEEechhhcccCCCCCCCEEEEECCCCCCCCccHHHHHHHHhCCCccc
Confidence 999999765443 345777889999999999999998776666689999999999999999999999999988877778
Q ss_pred cccccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCCCccHHHHhc
Q 000572 569 LDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWG 646 (1414)
Q Consensus 569 ~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~~l~p~ei~~ 646 (1414)
+++++||++||++||++++++++|+++++.++|.+|||+|+|||+++|+||+. +.|++|||++||+++++|+|+|||+
T Consensus 466 ~~~~~Vq~gdp~~ek~~~~~i~~~~~~~~~~~i~sihD~gaGGls~al~Ema~~~g~G~~i~L~~vp~~~~~m~~~eil~ 545 (1310)
T TIGR01735 466 LDFASVQRGNPEMERRCQEVIDRCWQLGEKNPIISIHDVGAGGLSNALPELIHDGGRGAVIDLRAVPLDDPGLSPLEIWC 545 (1310)
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHcCCCCceEEEeccCccHHHHHHHHHHhcCCceEEEEcCCCcccCCCCCHHHHhh
Confidence 89999999999999999999999999999999999999999999999999999 6899999999999999999999999
Q ss_pred ccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCCeEEEEeCcccccccCCC--CCCCCCeEEcchhhhhCCCCC
Q 000572 647 AEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSG--LPPPPPAVDLELERVLGDMPQ 724 (1414)
Q Consensus 647 sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~l~~~~~~~~~~~~~--~~~~~~~~dl~~~~l~~~~p~ 724 (1414)
|||||||+++|+|+++++|+++|++++|++++||+||+++++++.++.....|+... ...+++++|||+++|++++|+
T Consensus 546 sESQeR~vl~v~~~~~~~f~~i~~~~~~~~~vIG~vt~~~~l~v~~~~~~~~~~~~~~~~~~~~~~vdl~~~~L~~~~P~ 625 (1310)
T TIGR01735 546 NESQERYVLLVRAENLEIFTAICERERCPFAVVGTATGDGRLTLVDDTPVRRNGQGDAPSHFPNNPVDLPLEVLLGKMPK 625 (1310)
T ss_pred ccccccEEEEECcccHHHHHHHHHHcCCCEEEEEEECCCceEEEEecCcccccccccccccCCCeEEEeEHHHHcCCCCc
Confidence 999999999999999999999999999999999999999999998831111111000 113789999999999999999
Q ss_pred ceecccccCCCCCCCCCCCCCCHHHHHHHHHcCCCCCcchhhhhccccccCcccccccccCCCCCCcCcEEEEEecCCCc
Q 000572 725 KTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDL 804 (1414)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~vL~~p~VaSK~~l~~~~D~~V~g~tv~~p~vGp~~~pg~DaAVi~~~~~~~ 804 (1414)
++++.+++++...+++.+...+++++|++||++||||||+||++||||+|||+||+||||||||.|++||||++++..+.
T Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~vL~~pnVaSK~~l~~~~D~~V~g~tv~~~~vGp~q~p~aDaaV~~~~~~~~ 705 (1310)
T TIGR01735 626 MTRFVQRKAPMLQPLDIPPGLDLHEALERVLRLPAVASKRFLITIGDRSVGGLVARDQMVGPWQTPLADVAVTAASFDTY 705 (1310)
T ss_pred cccccccccccccccccCCCcCHHHHHHHHhcCCccccccchhhhcccccCCcEeeccCcCCCCCCCcCeEEEEecCCCc
Confidence 99999876544444455455689999999999999999999999999999999999999999999999999999976567
Q ss_pred eEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhCCc
Q 000572 805 TGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIA 884 (1414)
Q Consensus 805 ~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~~~~gl~eac~~lGv~ 884 (1414)
+|+|||+|++|+++.+|||+||++||+||++||+++|+.|+.+++||.||||+...|++++.|++++++|.++|++||||
T Consensus 706 ~G~ama~G~~P~~~~idP~~gA~~AV~EAl~NlaaaG~~~l~~i~~s~Nwm~~~~~pge~~~l~~av~al~eac~~LGip 785 (1310)
T TIGR01735 706 TGEAMAIGERPPKALLDPKASARLAVGEAITNLAAALVGDLSDVKLSANWMAAAGHPGEDAALYDAVKAVSELCPALGIA 785 (1310)
T ss_pred eEEEEEEcCCCCeeccCHHHHHHHHHHHHHhheeecCCcCHHHccccccchhhcCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 89999999999999999999999999999999999999999999999999998777888889999999999999999999
Q ss_pred ccccccccccccccCC----ceeecCCcEEEEEEEEcCCCCcccCCCccCCC-CcEEEEEEcCCCccccchHHHHHHhhh
Q 000572 885 IDGGKDSLSMAAYSGG----EVVKAPGSLVISVYVTCPDITKTVTPDLKLGD-DGILLHIDLAKGKRRLGGSALAQVFDQ 959 (1414)
Q Consensus 885 ivGGk~S~s~~~~~~~----~~v~~pptlvita~G~v~d~~~~lt~~~k~~G-d~~li~v~lg~~~~~LGGS~la~~~~~ 959 (1414)
|+||||||||++.|.+ +.+.+|||++||++|.++|+++++||++|++| |+.||||++++++.+||||+|++++++
T Consensus 786 iigGKdSls~~~~~~~~G~~~~v~~PpTlvisA~g~v~Dv~k~vTp~lk~~ggd~~Li~i~lg~~~~~LGGS~laq~~~~ 865 (1310)
T TIGR01735 786 IPVGKDSLSMKTRWQDNGETKSVTAPGSLVISAFAPVPDVRKTVTPDLKHDKGDSHLLLVDLGPGKNRLGGSALAQVFGQ 865 (1310)
T ss_pred ccccccccccccccccCCCcCccccCCCcEEEEEEEecCHhhccChhhccCCCCceEEEEEccCCcccchHHHHHHHhcc
Confidence 9999999999987753 34677999999999999999999999999985 767899899999999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCCCchHHHhcccccceEE
Q 000572 960 VGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVL 1039 (1414)
Q Consensus 960 ~~~~~p~v~d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~~~~~~~LFsE~~G~vl 1039 (1414)
+++.+|++++++.++++|+.++.++++++|+||||+|+|||+++|+||||+|++|++|+++.++.++...||+|++|+|+
T Consensus 866 ~g~~~P~vd~~~~lk~~f~~i~~li~~glV~A~HDvSdGGL~~aLaEMAfag~~G~~Idl~~i~~~~~~~LFsEs~G~Vi 945 (1310)
T TIGR01735 866 LGGDCPDLDDPERLKAFFAVMQGLVAEGLLLAYHDRSDGGLVTTLLEMAFAGHCGLDVDLDALGDSLFAVLFNEELGAVI 945 (1310)
T ss_pred ccCCCCCCCcHHHHHHHHHHHHHHHHcCCeEEEeeCCcChHHHHHHHHHHhCCCcEEEEeCCCCCcHHHHHhCCCCcEEE
Confidence 99899999668999999999999999999999999999999999999999999999999987655667789999999999
Q ss_pred EEecCCHHHHHHHHHHcCCCEEEEE--EEeCCCcEEEEECCEEEEeccHHHHHHHhhhccHHHHhhhccccchhhhhhcc
Q 000572 1040 EVSKSNLDTVSKKLHDAGVSAEIIG--QVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGL 1117 (1414)
Q Consensus 1040 ~V~~~~~~~v~~~l~~~gi~~~~IG--~v~~~~~l~i~~~g~~i~~~~~~~L~~~W~~~s~~~~~~~~~~~~~~~e~~~~ 1117 (1414)
+|++++.++++++|+++|+++.+|| ++++++.+.|+.+++.+++.++++|+++|++|||+|+++++||.|+++|++.+
T Consensus 946 eV~~e~~~~v~~~l~~~Gi~~~viGig~~~~~~~i~I~~~g~~l~~~~~~eL~~~W~~ts~~~~~l~~~~~~~~~e~~~~ 1025 (1310)
T TIGR01735 946 QVAKPDLAAVLELLRAAGLTALILGIGTPTGHPMIRISVNGATLLSEKRSELRDIWEETSFQLQRLRDNPECAEEEFEGL 1025 (1310)
T ss_pred EEehHHHHHHHHHHHhCCCceEEEEEEEECCCCEEEEEeCCEEEeeCcHHHHHHHHHhhhHhhcccccCchhhhHHHhhh
Confidence 9999999999999999999998888 45455678888899999999999999999999999999999999999998888
Q ss_pred cccCCCce--eeeeCCCcchhhcc-ccCCCCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEE
Q 000572 1118 KSRCEPLW--KLSFTPSLTDEKYM-NATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIV 1194 (1414)
Q Consensus 1118 ~~~~~~~~--~l~~~~~~~~~~~~-~~~~~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglv 1194 (1414)
.++..|.+ .++|+|......+. .+..+|||+||++||+||+++|++||+++||++++|||+||..+..+|++|++|+
T Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~vail~~pG~N~~~e~~~Af~~aGf~~~~v~~~dl~~~~~~l~~~~~lv 1105 (1310)
T TIGR01735 1026 RDRDGPGLKLPLTFDVNEDIAAPFINKGVRPKVAILREQGVNGDREMAAAFDRAGFEAWDVHMSDLLAGRVHLDEFRGLA 1105 (1310)
T ss_pred hcccCCCcccccccCcccccccccccCCCCceEEEEECCCCCCHHHHHHHHHHhCCCcEEEEEeccccCCcchhheeEEE
Confidence 87766655 45566655433332 3567899999999999999999999999999999999999998888899999999
Q ss_pred EcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHH-hcCccCCCCCCCccCCCCCCCCCeee
Q 000572 1195 FVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMA-LLGWIPGPQVGGVHGAGGDPSQPRFV 1273 (1414)
Q Consensus 1195 lPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~-~lgllp~~~g~~~~~~~~~~~~p~l~ 1273 (1414)
|||||||||++++|++||+++++|+.++++|++|++|+|+|+||||||||||+ ++|||| +. ..||+|+
T Consensus 1106 ~~GGFSygD~lgsg~~~a~~i~~~~~~~~~~~~f~~~~d~~~LGiCNGfQ~L~~~~gllp---~~--------~~~p~l~ 1174 (1310)
T TIGR01735 1106 ACGGFSYGDVLGAGKGWAKSILFNPRLRDQFQAFFKRPDTFSLGVCNGCQMLSNLLEWIP---GT--------ENWPHFV 1174 (1310)
T ss_pred EcCCCCCccchhHHHHHHHHHHhChHHHHHHHHHHhCCCceEEEecHHHHHHHHHhCcCC---CC--------CCCceee
Confidence 99999999999999999999999999999999999889999999999999999 889999 43 4789999
Q ss_pred ecCCCceEEeeEEEEEccCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCC
Q 000572 1274 HNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVN 1353 (1414)
Q Consensus 1274 ~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPn 1353 (1414)
+|+|+||||||++++|++++||||++|+|+++|+|++||||||+|.+++.+++|.+++||++||+|++|++|++||+|||
T Consensus 1175 ~N~s~~fe~r~~~~~v~~s~s~~~~~~~g~~l~~~vaHgEGr~~~~~~~~~~~l~~~~~ia~~Y~d~~g~~~~~yp~NPN 1254 (1310)
T TIGR01735 1175 RNNSERFEARVASVRVGESPSIMLRGMAGSRLPVAVAHGEGYAAFSSPELQAQADASGLAALRYIDDDGNPTEAYPLNPN 1254 (1310)
T ss_pred ecCCCCeEEeeeEEEECCCCChhhhhcCCCEEEEEeEcCCCCeeeCCHHHHHHHHhCCeEEEEEeCCCCCccCCCCCCCC
Confidence 99999999999999999999999999999999999999999998888888999999999999999999999999999999
Q ss_pred CCcCceeEEEcCCCcEEEEccCCccccccccCCCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1354 GSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1354 Gs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
||+++||||||+||||+||||||||++++|||||+|..|. ..|||++||+||++||
T Consensus 1255 GS~~~IaGi~s~dGrvl~~MpHPEr~~~~~q~~~~p~~~~----~~~pw~~~F~na~~w~ 1310 (1310)
T TIGR01735 1255 GSPGGIAGITSCDGRVTIMMPHPERVFRAWQNSWRPEDWD----EDTPWLRLFRNARNWL 1310 (1310)
T ss_pred CChhcceEeECCCCCEEEEcCCHHHhhhHhhCCcCCCCCC----CCCcHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999998763 3689999999999997
|
This model represents a single-molecule form of phosphoribosylformylglycinamidine synthase, also called FGAM synthase, an enzyme of purine de novo biosynthesis. This form is found mostly in eukaryotes and Proteobacteria. In Bacillus subtilis PurL (FGAM synthase II) and PurQ (FGAM synthase I), homologous to different parts of this model, perform the equivalent function; the unrelated small protein PurS is also required and may be a third subunit. |
| >PRK05297 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-258 Score=2507.26 Aligned_cols=1271 Identities=42% Similarity=0.706 Sum_probs=1165.6
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhhhCCCcceEEEEEEEEEecCCCCCHHHHHHHHHHhcccCCCCcCCcchhhhhhhcc
Q 000572 93 VVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQK 172 (1414)
Q Consensus 93 ~~~~~g~~als~~~~e~Ll~~l~~~~~~~V~~v~t~~~y~v~~~~~Ls~~~~~~l~~LL~~~~~~~~~~~~~~~~~~~~~ 172 (1414)
|++|||.++||+|+.++|+++|++ +++.|.+|++++||+|+.+++|++++.++|.|||+++..+. . .
T Consensus 1 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~~~~~~~v~~~~~l~~~~~~~l~~ll~~~~~~~-----~------~- 67 (1290)
T PRK05297 1 MLILRGSPALSAFRLQKLLARLQA-AVLPVTSIYAEYVHFADLSAPLSAEEQAKLERLLTYGPAEH-----E------P- 67 (1290)
T ss_pred CEEEcCCccCCHHHHHHHHHHHHh-cCCCceEEEEEEEEEEecCCCCCHHHHHHHHHHhcCCcccc-----C------C-
Confidence 689999999999999999999998 57789999999999999888999999999999999863310 0 0
Q ss_pred CCceEEEEEecCCCcCChhhhHHHHHHHHcCCCcCCeEEEEEEEEEecCCCCChhHHHHHHHhcccccccccccccc--c
Q 000572 173 GLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKL--T 250 (1414)
Q Consensus 173 ~~~~~~i~v~pr~g~~~~~s~~a~~i~~~~g~~~~~rie~~~~y~~~~~~~~~~~~~~~~~~~l~d~mt~~~~~~~~--~ 250 (1414)
. .+.++|+||+||+|||||||++|+++|||..|.||||+++|+|.+. .++++++++.++|||||||+++.... .
T Consensus 68 -~-~~~~~v~pr~g~~~~~s~~a~~i~~~~g~~~~~rie~~~~~~~~~~--~~~~~~~~i~~~l~n~m~e~~~~~~~~~~ 143 (1290)
T PRK05297 68 -A-GRLFLVTPRPGTISPWSSKATDIAHNCGLAGIRRIERGIAYYVEAA--LSAEQRAALAALLHDRMTESVFADLDDAE 143 (1290)
T ss_pred -c-ccEEEEEcCCCCCChhHHHHHHHHHHcCCccccEEEEEEEEEEccC--CCHHHHHHHHHHhCCccceEEEcCcchhh
Confidence 1 1378999999999999999999999999999999999999999753 33577889999999999999996643 2
Q ss_pred cccccCCCCceEEEecccCCHHHHHHHHHhCCCCCChhhHHHHHHHHHhhcCCCCCHHHHHHHHhhhccccccceeeeEE
Q 000572 251 SFETSVVPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKI 330 (1414)
Q Consensus 251 ~f~~~~~~~~~~~v~~~~~~~~~l~~~~~~~gLal~~~el~~~~~~f~~~l~R~Pt~~El~~~~q~wSEHCrhk~F~~~~ 330 (1414)
.|....+|+++.+|++++.++++|+++|+++||||+++||+||++||++ |||||||+||+||+|+||||||||||||+|
T Consensus 144 ~~~~~~~p~~~~~v~~~~~~~~~L~~~~~~~gLal~~~e~~~i~~~f~~-l~R~Ptd~El~~~~q~wSEHCrhk~F~~~~ 222 (1290)
T PRK05297 144 ALFSHHEPKPLTSVDVLGGGRAALEAANVELGLALAEDEIDYLVEAFTK-LGRNPTDVELMMFAQANSEHCRHKIFNADW 222 (1290)
T ss_pred hhhccCCCCCceEECCCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHhhhhcCCccCCCce
Confidence 3445658999999999999999999999999999999999999999986 999999999999999999999999999999
Q ss_pred EEcCcccchhHHHHHHHHhccCCCCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCc
Q 000572 331 VIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAP 410 (1414)
Q Consensus 331 ~~d~~~~~~~lf~~I~~~~~~~~~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP 410 (1414)
+|||+++++++|++||++.+..+++++++|+|||+||++....+|.+.. ++..+....++|+++||+|||||||+++|
T Consensus 223 ~id~~~~~~~l~~~i~~t~~~~~~~~~~~~~dna~vi~~~~~~~~~~~~--~~~~~~~~~e~~~~~fK~ETHNhPsaieP 300 (1290)
T PRK05297 223 TIDGEEQPKSLFKMIKNTHETNPDGVLSAYKDNAAVMEGSKVGRFFPDP--DTGRYGYHQEPAHILMKVETHNHPTAISP 300 (1290)
T ss_pred eecCcccchHHHHHHHHHHHhCCCcEEEEecCCcEEEEccccccccccc--ccccccccccceEEEEEeccCCCCCccCC
Confidence 9999999999999999999888889999999999999998877787753 22356666789999999999999999999
Q ss_pred HHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCe
Q 000572 411 YPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEP 490 (1414)
Q Consensus 411 ~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~Gvp 490 (1414)
|+||+||+||.|||+.+|||||+|+|++++|+||+|++|+..+|||+ .+++|.++++|++|+.+.+.|+++|||+||+|
T Consensus 301 f~GAaTG~GG~iRD~~~~G~Ga~piag~~~~~~~~l~~~~~~~~~e~-~~~~P~~~~~p~~i~~~~~~Gis~~gn~~G~P 379 (1290)
T PRK05297 301 FPGAATGSGGEIRDEGATGRGSKPKAGLTGFSVSNLRIPGFEQPWEE-DYGKPERIASALDIMIEGPLGGAAFNNEFGRP 379 (1290)
T ss_pred CCcccccCCceeccccccCCCCeeeecceeEEecCCCCCCCCCcccc-ccCCccccCCHhHhhhhccccHHHHhhhhCCC
Confidence 99999999999999999999999999999999999999998899997 88999999999999999999999999999999
Q ss_pred eeeeeeEEeccccCCC---CccccCCceEEEEEEEeeeCcccccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCC
Q 000572 491 LIQGYTRTFGMRLPSG---QRREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDA 567 (1414)
Q Consensus 491 lvgG~t~s~~~~~~~g---~~~~~~~Plv~~~~vG~v~~~~i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~ 567 (1414)
+|||+++.| ++..+| +++++++|+|+++++|.++++++.+..+++||+|+++|+++||+|+||++++++.++..++
T Consensus 380 vv~G~Vs~y-ne~~~~~~~~~~~~i~P~~~vg~vG~i~~~~~~~~~~~~Gd~IvllG~~~~rdglgGs~~ss~~~g~~~~ 458 (1290)
T PRK05297 380 NLLGYFRTF-EQKVNSHNEEVRGYHKPIMLAGGIGNIRADHVQKGEIPVGAKLIVLGGPAMRIGLGGGAASSMASGQSSE 458 (1290)
T ss_pred ccceEEEEE-eccccCccccccccccceEEEEEEEEEehhhccccCCCCCCEEEEECCCCCCCCccHHHHHHHHhccccc
Confidence 999999655 443322 4567899999999999999877777778999999999999999999999999998887777
Q ss_pred ccccccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCCCccHHHHh
Q 000572 568 DLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIW 645 (1414)
Q Consensus 568 ~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~~l~p~ei~ 645 (1414)
++++++||++||++||++++++++|+++.+.++|++|||+|+|||+++|.|||. ++|++||+++||+++++|+|+|+|
T Consensus 459 ~~~~~~Vq~~d~~~ek~~~~~i~~~~~~~~~~lI~s~hDvgaGGLa~AL~Ema~~~g~G~~idL~~vp~~~~~l~p~eil 538 (1290)
T PRK05297 459 DLDFASVQRGNPEMERRCQEVIDRCWQLGDDNPILSIHDVGAGGLSNAFPELVNDGGRGGRFDLRKIPNDEPGMSPLEIW 538 (1290)
T ss_pred ccccCCCCcCCHHHHHHHHHHHHHHHHhcccCCeeEEecCCccHHHHHHHHHHHhcCceEEEEeCCCccccCCCCHHHHH
Confidence 788899999999999999999999998878899999999999999999999999 789999999999999999999999
Q ss_pred cccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCCeEEEEeCcccccccCCCCCCCCCeEEcchhhhhCCCCCc
Q 000572 646 GAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQK 725 (1414)
Q Consensus 646 ~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~l~~~~~~~~~~~~~~~~~~~~~dl~~~~l~~~~p~~ 725 (1414)
+||+||||+++|+|+++++|+++|+++++++++||+||+++++++.+. .+++.++|+|+++|++++|++
T Consensus 539 ~SESQeRmlv~V~~e~~e~~~~i~~~~~l~~~vIG~vt~~~~l~v~~~-----------~~g~~~vdl~~~~L~~~~p~~ 607 (1290)
T PRK05297 539 CNESQERYVLAIAPEDLELFEAICERERCPFAVVGEATEERHLTLEDS-----------HFDNKPVDLPLDVLLGKPPKM 607 (1290)
T ss_pred hccccceEEEEEcchhHHHHHHHHHhcCCCEEEEEEEeCCCeEEEEec-----------CCCceEEEEEHHHhcCCCCce
Confidence 999999999999999999999999999999999999999899999863 147889999999999999999
Q ss_pred eecccccCCCCCCCCCCCCCCHHHHHHHHHcCCCCCcchhhhhccccccCcccccccccCCCCCCcCcEEEEEecCCCce
Q 000572 726 TFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLT 805 (1414)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~vL~~p~VaSK~~l~~~~D~~V~g~tv~~p~vGp~~~pg~DaAVi~~~~~~~~ 805 (1414)
+++.+++++...+++. ...++++++++||+|||||||+||++||||+|||+|||||||||||.|++||||++++..+.+
T Consensus 608 ~~~~~~~~~~~~~~~~-~~~~~~~~l~~vL~~pnV~SK~~l~~~~D~~V~g~tv~~p~vGp~q~p~~DaaV~~~~~~~~~ 686 (1290)
T PRK05297 608 HRDVKTVKAKGPALDY-SGIDLAEAVERVLRLPTVASKSFLITIGDRSVTGLVARDQMVGPWQVPVADCAVTAASYDGYA 686 (1290)
T ss_pred ecCcccccccccccCC-CCcCHHHHHHHHhcCCccccccchhhccCcccCCCEeecCCcCCCCCCCCCeEEEEecCCCCe
Confidence 9998876543333332 345899999999999999999999999999999999999999999999999999999665578
Q ss_pred EeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHHHHHHHHHH-HHHHHhCCc
Q 000572 806 GGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALA-EAMIELGIA 884 (1414)
Q Consensus 806 gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~~~~gl~-eac~~lGv~ 884 (1414)
|++||+|++|+++.+|||+||++||+||++||+|+|+.++.++.+|+|||||.+.|++.++|++++++|. ++|++||||
T Consensus 687 g~ama~G~~P~~~~~dP~~ga~~AV~EA~~Nlvaag~~~~~~i~ls~N~~~~~~~p~~~a~L~~av~a~~~e~c~~Lgip 766 (1290)
T PRK05297 687 GEAMAMGERTPVALLDAAASARMAVGEALTNIAAAPIGDLKRIKLSANWMAAAGHPGEDARLYDAVKAVGMELCPALGIT 766 (1290)
T ss_pred EEEEEEcCCCCeeccCHHHHHHHHHHHHHhhheecCCccccceEEEEEEeccCCCCchHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999878899999999999888888899999999999 999999999
Q ss_pred ccccccccccccccC----CceeecCCcEEEEEEEEcCCCCcccCCCcc-CCCCcEEEEEEcCCCccccchHHHHHHhhh
Q 000572 885 IDGGKDSLSMAAYSG----GEVVKAPGSLVISVYVTCPDITKTVTPDLK-LGDDGILLHIDLAKGKRRLGGSALAQVFDQ 959 (1414)
Q Consensus 885 ivGGk~S~s~~~~~~----~~~v~~pptlvita~G~v~d~~~~lt~~~k-~~Gd~~li~v~lg~~~~~LGGS~la~~~~~ 959 (1414)
++||||||||.+.|+ ++.+++|||++||++|.++|+++++||++| ..|+ .|++|+++++..+||||+|++.+++
T Consensus 767 iigGkdSmS~~t~yne~~~~~~v~iPpTlvisa~g~v~dv~~~vTp~lkk~~g~-~l~lI~lg~~~~~lGGS~laq~~~~ 845 (1290)
T PRK05297 767 IPVGKDSLSMKTKWQEGGEDKEVTSPLSLIISAFAPVEDVRKTLTPQLRTDKDT-ALLLIDLGRGKNRLGGSALAQVYNQ 845 (1290)
T ss_pred ccccchhcCCccccccCCCCCcceeCCccEEEEEEEecCcccccCcccccCCCC-EEEEEECCCCcccchHhHHHHHhhh
Confidence 999999999877664 245789999999999999999999999996 4554 7889999988899999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCCCchHHHhcccccceEE
Q 000572 960 VGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVL 1039 (1414)
Q Consensus 960 ~~~~~p~v~d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~~~~~~~LFsE~~G~vl 1039 (1414)
+++.+|+++|++.++++|+.++.++++|+|+||||+|+|||+++|+||||+|++|++|+++.++.+++..||+|++|+|+
T Consensus 846 ~g~~~P~v~d~~~lk~~~~~v~~li~~glv~S~HDvSdGGL~~aLaEMAfa~~~G~~Idl~~i~~~~~~~LFsE~~G~vv 925 (1290)
T PRK05297 846 LGDKAPDVDDAEDLKGFFNAIQALVAEGLLLAYHDRSDGGLLTTLAEMAFAGHCGLDIDLDALGDDALAALFNEELGAVI 925 (1290)
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCcCHHHHHHHHHHhhCCCcEEEEeCCCCchHHHHHhCCCceEEE
Confidence 98889987689999999999999999999999999999999999999999999999999987544457889999999999
Q ss_pred EEecCCHHHHHHHHHHcCC--CEEEEEEEeCCCcEEEEECCEEEEeccHHHHHHHhhhccHHHHhhhccccchhhhhhcc
Q 000572 1040 EVSKSNLDTVSKKLHDAGV--SAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGL 1117 (1414)
Q Consensus 1040 ~V~~~~~~~v~~~l~~~gi--~~~~IG~v~~~~~l~i~~~g~~i~~~~~~~L~~~W~~~s~~~~~~~~~~~~~~~e~~~~ 1117 (1414)
+|++++.+++++.|++.|+ ++++||+|++++.+.|+.+++.+++.++++|+++|+++||++++++++|.|+++|++.+
T Consensus 926 eV~~~~~~~v~~~l~~~gi~~~~~~IG~vt~~~~l~I~~~~~~~~~~~l~eL~~~W~~ts~~~~~~~~~~~~~~~~~~~~ 1005 (1290)
T PRK05297 926 QVRAADRDAVEAILAEHGLSDCVHVIGKPNAGDRIVITRNGKTVFSESRTELRRWWSETSYQMQRLRDNPECADQEFDAI 1005 (1290)
T ss_pred EEehHHHHHHHHHHHHcCCCCCCeEEEEECCCceEEEEeCCeeEeeccHHHHHHHHHhhHHHhcccccCchhHHHHHhhh
Confidence 9999999999999999999 99999999988888887788888999999999999999999999999999999999888
Q ss_pred cccCCCcee--eeeCCCcchhhccc-cCCCCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEE
Q 000572 1118 KSRCEPLWK--LSFTPSLTDEKYMN-ATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIV 1194 (1414)
Q Consensus 1118 ~~~~~~~~~--l~~~~~~~~~~~~~-~~~~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglv 1194 (1414)
+++..+.++ ++|+|..+...+.. ..++|||+||++||+||+++|++||+++||++++||++||..+...|++|++|+
T Consensus 1006 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pkv~il~~pG~N~~~e~~~Af~~aG~~~~~v~~~dl~~~~~~l~~~~~l~ 1085 (1290)
T PRK05297 1006 LDQADPGLNVKLTFDPNEDIAAPFIATGARPKVAILREQGVNSHVEMAAAFDRAGFDAIDVHMSDLLAGRVTLEDFKGLV 1085 (1290)
T ss_pred ccccCCCcccccccCcccccccccccCCCCCeEEEEECCCCCCHHHHHHHHHHcCCCeEEEEeecCcCCCCChhhCcEEE
Confidence 887766554 78888765433322 347899999999999999999999999999999999999988887899999999
Q ss_pred EcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcC-ccCCCCCCCccCCCCCCCCCeee
Q 000572 1195 FVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLG-WIPGPQVGGVHGAGGDPSQPRFV 1273 (1414)
Q Consensus 1195 lPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lg-llp~~~g~~~~~~~~~~~~p~l~ 1273 (1414)
|||||||||++++|++||+++++|+.++++|++|++++|+|+||||||||+|+++| ++| +. ..||+|+
T Consensus 1086 ~~GGFS~gD~lgsg~~~a~~~~~n~~~~~~~~~f~~~~d~~~LGiCNGfQ~L~~lg~l~p---~~--------~~~p~l~ 1154 (1290)
T PRK05297 1086 ACGGFSYGDVLGAGEGWAKSILFNPRLRDQFEAFFARPDTFALGVCNGCQMMSNLKEIIP---GA--------EHWPRFV 1154 (1290)
T ss_pred ECCccCCcccchHHHHHHHHhhccHHHHHHHHHHHhCCCceEEEEcHHHHHHHHhCCccC---CC--------CCCCeEe
Confidence 99999999999999999999999999999999999889999999999999999997 777 33 5799999
Q ss_pred ecCCCceEEeeEEEEEccCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCC
Q 000572 1274 HNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVN 1353 (1414)
Q Consensus 1274 ~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPn 1353 (1414)
+|.|+||||||++++|++++||||++|+|+++|+|++||||||+++ ++.+++|.++|||++||+|.+|++|++||+|||
T Consensus 1155 ~N~s~rfesr~~~~~v~~~~s~~~~~~~g~~l~~~vaHgeGr~~~~-~~~~~~l~~~~~ia~~Y~d~~g~~~~~yp~NPN 1233 (1290)
T PRK05297 1155 RNRSEQFEARFSLVEVQESPSIFLQGMAGSRLPIAVAHGEGRAEFP-DAHLAALEAKGLVALRYVDNHGQVTETYPANPN 1233 (1290)
T ss_pred ecCCCCeEEeeeEEEECCCCChhHhhcCCCEEEEEEEcCcccEEcC-HHHHHHHHHCCcEEEEEECCCCCcccCCCCCCC
Confidence 9999999999999999999999999999999999999999999995 558899999999999999999999999999999
Q ss_pred CCcCceeEEEcCCCcEEEEccCCccccccccCCCCCCCCCCCCCCCChhHHHHHHHHHhhC
Q 000572 1354 GSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS 1414 (1414)
Q Consensus 1354 Gs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~~ 1414 (1414)
||+++||||||+|||||||||||||++++|||||+|..|. +.|||++||+||++||+
T Consensus 1234 GS~~~IaGi~s~dGrvlglMpHPEr~~~~~q~~~~p~~~~----~~~PW~~~F~na~~w~~ 1290 (1290)
T PRK05297 1234 GSPNGITGLTTADGRVTIMMPHPERVFRTVQNSWHPEEWG----EDSPWMRMFRNARKWVG 1290 (1290)
T ss_pred CChhcceEeECCCCCEEEEcCChHHhcchhhcCcCCCccc----CCCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999998663 36999999999999985
|
|
| >TIGR01857 FGAM-synthase phosphoribosylformylglycinamidine synthase, clade II | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-211 Score=2013.21 Aligned_cols=1176 Identities=23% Similarity=0.300 Sum_probs=996.5
Q ss_pred CCHHHHHHHHHHHHhhhCCC-cceEEEEEEEEEecCCCCCHHHHHHHH-HHhcccCCCCcCCcchhhhhhhccCCceEEE
Q 000572 102 LQDSAAAELLKSVQKKISNQ-IVGLKTEHCFNIGLDSRISTKKLEVLK-WLLQETYEPENLGTESFLEKKKQKGLKAVIV 179 (1414)
Q Consensus 102 ls~~~~e~Ll~~l~~~~~~~-V~~v~t~~~y~v~~~~~Ls~~~~~~l~-~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~i 179 (1414)
-.|.++++|+++|+..+++. |.+||+..+|.|+ + +++++++++. .+|+++..+......+. . . ...|+|
T Consensus 10 ~~d~~~~~l~~~~~~~l~~~~l~~vr~~~~y~i~--~-~~~~~~~~~~~~v~sep~~d~~~~~~~~---~-~--~~~~~~ 80 (1239)
T TIGR01857 10 GFDVESQSLVKELRHNLGLSSLKDLRIVNVYDVF--D-LAEELFAPTVKTIFSEPVTDHVLDELSV---Q-A--DLAKFF 80 (1239)
T ss_pred cccHHHHHHHHHHHHHcCCCccceEEEEEEEEcc--C-CCHHHHHHHhcCcCCCCCcceEeccccc---c-c--CCceEE
Confidence 34889999999999988986 9999999999995 3 9999999987 48888766543322110 1 1 224699
Q ss_pred EEecCCCcCChhhhHHHHHHHHcCCCcCCeEEEEEEEEEecCCCCChhHHHHHHHhcccccccccccc--ccccccccCC
Q 000572 180 EVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTE--KLTSFETSVV 257 (1414)
Q Consensus 180 ~v~pr~g~~~~~s~~a~~i~~~~g~~~~~rie~~~~y~~~~~~~~~~~~~~~~~~~l~d~mt~~~~~~--~~~~f~~~~~ 257 (1414)
+|.++||++|+-+..|.+.++.+--....+|.+++.|+|.++. +++++++|...|-|+..+.+... +.........
T Consensus 81 ~v~~lPG~~D~ra~sa~q~i~~l~~~~~~~v~t~~~y~~~g~~--~~~~~~~i~~~~iN~v~~r~~~~~~~~~~~~~~~~ 158 (1239)
T TIGR01857 81 AVEFLPGQFDQRADSAQECILLLSESEDVTVNTAKLYILNGDL--DDEELNKIKNYYINPVDSREKDLTTGKALEEFSES 158 (1239)
T ss_pred EEEeCCCCcCcHHHHHHHHHHHhcCCCCceEEEEEEEEEecCC--CHHHHHHHHHHcCChHHheeecccCccchhhhccC
Confidence 9999999999999999997776432446789999999998753 35778999997779887765422 2222122335
Q ss_pred CCceEEEec-ccCCHHHHHHHHHhCCCCCChhhHHHHHHHHHhhcCCCCCHHHHHHHHhhhccccccceeeeEEEEcCcc
Q 000572 258 PEEVRFVPV-MENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKP 336 (1414)
Q Consensus 258 ~~~~~~v~~-~~~~~~~l~~~~~~~gLal~~~el~~~~~~f~~~l~R~Pt~~El~~~~q~wSEHCrhk~F~~~~~~d~~~ 336 (1414)
|+++.+|++ +++++++|+++++++||||+++||+|||+||++ |+|||||+||+||||+||||||||||||+ ||+..
T Consensus 159 ~~~v~~~~~f~~~~~~~L~~~~~e~gLAl~~~di~~i~~yF~~-~~R~PTd~El~~laq~wSeHCRH~~F~~~--i~~~~ 235 (1239)
T TIGR01857 159 PKEVETLTGFESYDAEDLAKFKAEQGLAMSLEDLKFIQDYFKS-IGRNPTETEIKVLDTYWSDHCRHTTFETE--LKHVT 235 (1239)
T ss_pred CCCceeecccccCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHh-cCCCCChhheeeccccchhhhcCccccce--eccee
Confidence 889999998 689999999999999999999999999999997 99999999999999999999999999999 56767
Q ss_pred cchhHH-HHHHHHhcc--------CCCCceeeeccCcceeecCCcccccccCCC--------C--------CccccccCC
Q 000572 337 MVRTLM-QIVKSTLQA--------NPNNSVIGFKDNSSAIKGFPVKQLRPVQPG--------S--------RCQLSESSQ 391 (1414)
Q Consensus 337 ~~~~lf-~~I~~~~~~--------~~~~~~~g~~Ddaavi~~~~~~~~~~~~~g--------~--------~~~~~~~~~ 391 (1414)
.+.++| ++|+++++. .++...+.+.|+|.+..- +.+...+ + +..++...+
T Consensus 236 ~~~~~~~~~i~~~~~~y~~~r~~~~~~~~~~~l~d~ati~~k-----~~~~~~~~~~~d~s~~ina~~~~v~v~~~~~~e 310 (1239)
T TIGR01857 236 FSDSKFQKQLKKAYEDYLAMREELGRSEKPVTLMDMATIFAK-----YLRKNGKLDDLEVSEEINACSVEIEVDVDGVKE 310 (1239)
T ss_pred cccchhHHHHHHHHHHHHhhhhhcCCcCcchhHHHHHHHHHH-----HhhccccccccchhhhhccCceEEEEEEEEEec
Confidence 777777 677766654 334556667777764421 1110000 0 112556778
Q ss_pred ceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHH
Q 000572 392 DLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQ 471 (1414)
Q Consensus 392 ~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~ 471 (1414)
+|+++||+|||||||+++||+||+||+||.|||+++| | +++++++++|+...||++.+.++++++ ++++
T Consensus 311 ~~~v~fK~ETHNHPSaIePf~GAATGvGG~IRD~lsg--~--------a~~~~~Lr~~g~g~p~~~~~~~~~gkl-p~r~ 379 (1239)
T TIGR01857 311 PWLLMFKNETHNHPTEIEPFGGAATCIGGAIRDPLSG--R--------SYVYQAMRVTGAGDPTVPISETLKGKL-PQRK 379 (1239)
T ss_pred ceEEEEEEccCCCCCccCCCCcccccCCchhcccccc--c--------eeeecccccCCCCCCCccccccccCCC-chhh
Confidence 9999999999999999999999999999999999996 4 357888899998899987677788776 8999
Q ss_pred HHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccC-CceEEEEEEEeeeCcccccCCCCCCCEEEEEccCCCcc
Q 000572 472 ILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWL-KPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRI 550 (1414)
Q Consensus 472 i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~-~Plv~~~~vG~v~~~~i~r~~a~~GD~Ivv~G~~~g~~ 550 (1414)
|+.+++.|+++|+|++|+|+++|.+ ++++ +|. +|+++++++|.++++++.|..+++||+||++|++|||+
T Consensus 380 I~~gv~~G~s~YGN~~GvpTg~g~~--~f~~-------~Y~~~~lv~~~~vG~~~~~~v~k~~~~~Gd~iv~~Gg~tGRd 450 (1239)
T TIGR01857 380 ITTTAAHGYSSYGNQIGLATGQVSE--IYHP-------GYVAKRMEVGAVVAATPKENVVREKPEPGDVIILLGGKTGRD 450 (1239)
T ss_pred hhhhcccceeccCcccCCceeeEEE--EEec-------CCCCCceEEEEEEEeecHHHhccCCCCCCCEEEEECCCCCcC
Confidence 9999999999999999999999988 3332 354 56778899999999998887799999999999999999
Q ss_pred cccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhcCCeEEEEeC
Q 000572 551 GMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIR 630 (1414)
Q Consensus 551 GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~~~Ga~Idl~ 630 (1414)
|+||+++||+.+++.+.+.++++||++||++||++++++..+ .+.++|++|||+|+|||+++|.|||. |++|||+
T Consensus 451 GigGat~SS~~~~~~s~~~~~~aVQ~Gdp~~Ekkl~e~i~~a---~~~glI~s~hD~gaGGLavAlaEma~--G~~IdL~ 525 (1239)
T TIGR01857 451 GIGGATGSSKEHTVESLELCGAEVQKGNAPEERKIQRLFRNG---NVTRLIKKCNDFGAGGVSVAIGELAD--GLEIDLN 525 (1239)
T ss_pred cccchhhhhhhccccccccccCccCcCCHHHHHHHHHHHHHH---HhCCCEEEEeecchhHHHHHHHHHhC--CEEEEcC
Confidence 999999999998887667889999999999999998766554 46899999999999999999999995 9999999
Q ss_pred CCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCCeEEEEeCcccccccCCCCCCCCCe
Q 000572 631 AIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPA 710 (1414)
Q Consensus 631 ~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~l~~~~~~~~~~~~~~~~~~~~ 710 (1414)
++|+++++|+|+|+|+|||||||+++|+|++.++|+++|+++++++++||+||+++++++.+ +++++
T Consensus 526 ~vp~~~~gl~p~EiLfSESQeRmlv~V~pe~~e~f~~i~~~~~l~~~vIG~vt~~~~l~v~~-------------~g~~v 592 (1239)
T TIGR01857 526 KVPKKYEGLNGTELAISESQERMAVVVSPEDVDAFLAYCNEENLEATVVATVTEKPRLVMNW-------------NGKTI 592 (1239)
T ss_pred CCccccCCCCHHHHhhCCcCCeEEEEEChhhHHHHHHHHHHCCCCEEEEEEECCCCeEEEEe-------------CCceE
Confidence 99999999999999999999999999999999999999999999999999999989999988 48999
Q ss_pred EEcchhhhhCCCCCceecccccCCC----CCCCCCCCCCCHHHHHHHHHcCCCCCcchhhhhccccccCcccccccccCC
Q 000572 711 VDLELERVLGDMPQKTFEFHHADQA----REPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGP 786 (1414)
Q Consensus 711 ~dl~~~~l~~~~p~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~vL~~p~VaSK~~l~~~~D~~V~g~tv~~p~vGp 786 (1414)
+|||+++|++++|++.++.+++++. ..+.+. ...+++++|++||++||||||+||++||||+|||+||++||+||
T Consensus 593 ~dL~~~fL~~~gp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~vL~~pnVaSK~~l~~qyD~~V~g~TV~~P~gG~ 671 (1239)
T TIGR01857 593 VDLSRRFLDTNGVRQVIDAKVVDKDVKLPEERQKT-SAETLEEDWLKVLSDLNVASQKGLQERFDSSVGAGTVLMPLGGK 671 (1239)
T ss_pred EEeeHHHHcCCCCCCeeeccccccccccccccCCC-CCcCHHHHHHHHhcCCcccchhhhhhhcCcccCCCeeeCCCCCC
Confidence 9999999999999999988875431 112221 33589999999999999999999999999999999999999999
Q ss_pred CCCCcCcEEEEEecC---CCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCc
Q 000572 787 LQITLADVAVIAQTY---TDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGE 863 (1414)
Q Consensus 787 ~~~pg~DaAVi~~~~---~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e 863 (1414)
||.|++||||++++. .+.+|+|||+|++|+++.+|||+||++||+||++||+|+|++|. .+.||++ .+++++|++
T Consensus 672 ~q~~~~DaaV~~~~~~~g~t~~g~ams~g~nP~~~~~dPy~ga~~AV~EA~rNlva~G~~~~-~i~Lnf~-~~F~k~p~~ 749 (1239)
T TIGR01857 672 YQLTPTEASVAKLPVLGGETHTASAIAWGFNPYIAEWSPYHGAAYAVIESLAKLVAAGADYK-KARLSFQ-EYFEKLDKD 749 (1239)
T ss_pred cCCCCcceEEEEeeccCCCCCeEEEEEecCCCceeccCHHHHHHHHHHHHHhhhheeCCcHH-HEEEecc-cccccCCCC
Confidence 999999999999762 24689999999999999999999999999999999999999975 4665543 234666666
Q ss_pred HHHHHH---HHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEE
Q 000572 864 GAAMYD---AATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHID 940 (1414)
Q Consensus 864 ~~~l~~---~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~ 940 (1414)
++.|++ ++.|+.++|++||+|++||||||||++ + .+++||||+++++| +.|+++++||++|.+|+ .|++|
T Consensus 750 p~~w~~~~~al~ga~~a~~~lgipvigGKdSmsn~~--~--~v~iPPTlvi~avg-v~Dv~~~vt~~~K~~G~-~i~li- 822 (1239)
T TIGR01857 750 AERWGKPFAALLGAIKAQIDLGLPAIGGKDSMSGTF--E--ELTVPPTLISFAVT-TANSRRVISPEFKAAGE-NIYLI- 822 (1239)
T ss_pred hhHHhHHHHHHHHHHHHHHHhCCCCCcceecCcccc--C--CeeeCCccEEEEEe-ccCHhhccChhhccCCC-EEEEE-
Confidence 676765 677888999999999999999999974 3 48899999999999 55899999999999996 56666
Q ss_pred cCCCccccchHHHHHHhhhcCCCCCCCCChHHHHHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeC
Q 000572 941 LAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLN 1020 (1414)
Q Consensus 941 lg~~~~~LGGS~la~~~~~~~~~~p~v~d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~ 1020 (1414)
+.+... ...| |++.++++|+++++++++|+|.|+||+|+|||++||+||||++++|++|+++
T Consensus 823 -g~~~~~--------------~g~~---d~~~~k~~~~~v~~li~~g~v~s~hDvS~GGL~vaLaEMaf~g~~G~~i~l~ 884 (1239)
T TIGR01857 823 -PGQALE--------------DGTI---DFDLLKENFAQIEELIADHKVVSASAVKYGGVAESLAKMTFGNRIGAELNNP 884 (1239)
T ss_pred -cCCccc--------------CCCC---CHHHHHHHHHHHHHHHHCCCEEEEEeCCcChHHHHHHHHHhcCCceEEEecC
Confidence 332211 1134 5689999999999999999999999999999999999999999999999986
Q ss_pred CCCCchHHHhcccccce-EEEEecCCHHHHHHHHHHcCCCEEEEEEEeCCCcEEEEECCEEEEeccHHHHHHHhhhccHH
Q 000572 1021 SEGNSLFQTLFAEELGL-VLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFE 1099 (1414)
Q Consensus 1021 ~~~~~~~~~LFsE~~G~-vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i~~~g~~i~~~~~~~L~~~W~~~s~~ 1099 (1414)
. ...||+|++|+ |++|+++. .++++.+||+|+++.. |..++ +++++++|+++|+++++.
T Consensus 885 ~-----~~~LFsE~~gr~vvev~~~~----------~~~~~~~IG~v~~~~~--l~~~~---~~~~~~~L~~~w~~~l~~ 944 (1239)
T TIGR01857 885 E-----LEDLFTAQYGSFIFESPEEL----------SIANVEKIGQTTADFV--LKVNG---EKLDLEELESAWEGKLEE 944 (1239)
T ss_pred c-----HHHhhCCCCceEEEEEChhh----------cCCcceEEEEECCccE--EEECC---EEeeHHHHHHHHHHHHHH
Confidence 3 35699999995 88898651 2788999999987544 45666 457999999999999977
Q ss_pred H--HhhhccccchhhhhhcccccCCCceeeeeCCCcchhhccccCCCCEEEEEecCCCcCHHHHHHHHHHcCCceEEeec
Q 000572 1100 L--EKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTM 1177 (1414)
Q Consensus 1100 ~--~~~~~~~~~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~ 1177 (1414)
+ ++++++|+|++ . . +... .+..|.+ ..+..+|||+||++||+||++||++||+++||++++||+
T Consensus 945 ~~~~~~~~~~~~~~--~--~-~~~~--~~~~~~~-------~~~~~kpkvaIl~~pGtNce~d~a~Af~~aG~~~~~v~~ 1010 (1239)
T TIGR01857 945 VFPSKFEDKKETVE--V--P-AVAS--EKKVIKA-------KEKVEKPRVVIPVFPGTNSEYDSAKAFEKEGAEVNLVIF 1010 (1239)
T ss_pred HHHHhhccchhhhh--c--c-ccCC--ccceecc-------ccCCCCCeEEEEECCCCCCHHHHHHHHHHcCCceEEEEE
Confidence 7 66677766652 1 0 0001 1222322 124568999999999999999999999999999999999
Q ss_pred ccccCcc---------cCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHh
Q 000572 1178 SDLINGA---------ISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMAL 1248 (1414)
Q Consensus 1178 ~dl~~~~---------~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~ 1248 (1414)
+||..+. ..|++||+|+|||||||||+++++.+|++++++|+.++++|++|++ +|+|+||||||||+|++
T Consensus 1011 ~dl~~~~i~~s~~~~~~~l~~~~~l~~pGGFSyGD~l~~~~~~~aa~~~n~~~~~~~~~f~~-~d~~~LGICNGfQ~L~~ 1089 (1239)
T TIGR01857 1011 RNLNEEALVESVETMVDEIDKSQILMLPGGFSAGDEPDGSAKFIAAILRNPKVRVAIDSFLA-RDGLILGICNGFQALVK 1089 (1239)
T ss_pred ecCcccccccchhhhhcccccCcEEEEcCccCcccccchhHHHHHHHhhChHHHHHHHHHHh-CCCcEEEechHHHHHHH
Confidence 9987665 4689999999999999999998888899999999999999999996 89999999999999999
Q ss_pred cCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCC-CcEEEEEEeeccceEEeCChhhHHHH
Q 000572 1249 LGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGME-GSTLGVWAAHGEGRAYFPDDGVLDRI 1327 (1414)
Q Consensus 1249 lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~-g~~~~~~~~HgeGr~~~~~~~~~~~l 1327 (1414)
+||||+++.. +..+.||+|++|.|+||+|||++++|.+++||||++|+ |+++++|++||||||+++ ++.+++|
T Consensus 1090 lGLlP~~~~~-----~~~~~~p~l~~N~s~rf~~r~v~~~v~~~~s~~~~~~~~g~~~~ipvaHgEGrf~~~-~~~l~~l 1163 (1239)
T TIGR01857 1090 SGLLPYGNIE-----AANETSPTLTYNDINRHVSKIVRTRIASTNSPWLSGVSVGDIHAIPVSHGEGRFVAS-DEVLAEL 1163 (1239)
T ss_pred cCCCcCcccc-----ccccCCceeeecCCCCeEEeeeEEEECCCCChhHhcCCCCCEEEEEeEcCCcceecC-HHHHHHH
Confidence 9999965432 34578999999999999999999999999999999996 999999999999999984 6789999
Q ss_pred hhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccccccCCCCCCCCCCCCCCCChhHHHHH
Q 000572 1328 LHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQ 1407 (1414)
Q Consensus 1328 ~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~ 1407 (1414)
.++|||++||+|.+|++|++||+|||||+++||||||+|||||||||||||+.+.++++. +. -.+++||+
T Consensus 1164 ~~~~qva~rYvd~~g~~t~~~p~NPNGS~~~IaGi~s~dGrvlg~MpHpER~~~~~~~~~-~g---------~~~~~iF~ 1233 (1239)
T TIGR01857 1164 RENGQIATQYVDFNGKPSMDSKYNPNGSSLAIEGITSPDGRIFGKMGHSERYGDGLFKNI-PG---------NKDQHLFA 1233 (1239)
T ss_pred HHCCcEEEEEeCCCCCcccCCCCCCCCChhhhhEeECCCCCEEEECCCcccccCcccCCC-Cc---------hhhhHHHH
Confidence 999999999999999999999999999999999999999999999999999999988755 32 15899999
Q ss_pred HHHHhh
Q 000572 1408 NAREWC 1413 (1414)
Q Consensus 1408 na~~~~ 1413 (1414)
|+++|+
T Consensus 1234 ~~v~y~ 1239 (1239)
T TIGR01857 1234 SGVKYF 1239 (1239)
T ss_pred HHHhhC
Confidence 999985
|
This model represents a single-molecule form of phosphoribosylformylglycinamidine synthase, also called FGAM synthase, an enzyme of purine de novo biosynthesis. This model represents a second clade of these enzymes found in Clostridia, Bifidobacteria and Streptococcus species. This enzyme performs the fourth step in IMP biosynthesis (the precursor of all purines) from PRPP. |
| >PHA03366 FGAM-synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-159 Score=1559.51 Aligned_cols=927 Identities=28% Similarity=0.419 Sum_probs=803.2
Q ss_pred CCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCcc
Q 000572 430 RGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRR 509 (1414)
Q Consensus 430 rGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~ 509 (1414)
-|..|.+.+.++-.-.+ ....+- .. ...+ .....++--+...|+||+|+|+|++++|+++. +++
T Consensus 282 p~~~~~a~~~G~y~~~~---~~~~~~--------~~-~~~~-~~~~~~~~~~~~lnk~G~Pvi~Gf~r~~~~~~---~~~ 345 (1304)
T PHA03366 282 PGGLPRASALGWYVTTP---SGGGPL--------SP-LAPR-QIAETLEAQARSLNCSGVPVVGGFLRTIPTTL---ALI 345 (1304)
T ss_pred cccchhhhccceEEecC---ccCCCc--------ch-hhHH-HHHHHHHHHHHHHhhcCCCEeccEeEEecccc---ccc
Confidence 37888888888765432 211110 00 1223 33456666677899999999999999997654 456
Q ss_pred ccCCceEEE--EEEEeeeCcccccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHH
Q 000572 510 EWLKPIMFS--GGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYR 587 (1414)
Q Consensus 510 ~~~~Plv~~--~~vG~v~~~~i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~ 587 (1414)
++.+|+|++ +++|.++..++.+..+++|+.|+++| .+++|+||.+.+++. .+..+++.+||+++++|++++.
T Consensus 346 ~~~~~~m~~~~~~~g~~~~~~~~~~~~~~g~~vv~lG--~y~~~~g~~a~~~~~---~~S~~~~navqr~~~~m~~~~~- 419 (1304)
T PHA03366 346 SPLPNNMLTFTSLLSTISTIALDTARYRPGQYIVALG--SFEPSSGPDTPPYLY---RDSGLEANKILQALKLFYSLLP- 419 (1304)
T ss_pred cccCCceeeecccccccchhhhccCCCCCCCEEEEEc--CceecCCCCCCCccc---ccCHHHHHHHHHHHHHHHhhcC-
Confidence 799999988 89999988888777789999999999 689999999887762 2356788999999999998874
Q ss_pred HHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhcCCeEEEEeCCCCCCCCCccHHHHhccccccee--------------
Q 000572 588 VVRACIEMGETNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQD-------------- 653 (1414)
Q Consensus 588 ~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~~~Ga~Idl~~iP~~~~~l~p~ei~~sEsqer~-------------- 653 (1414)
++|++ .++||.++||..+.|.|+++..|++||++++| ++.++.+|+|.+|+||++
T Consensus 420 --~~~v~-------~si~d~g~~~~~~~L~elv~p~G~~i~~~~lp--d~tls~le~~~~e~qe~~~~~v~~~flnv~~~ 488 (1304)
T PHA03366 420 --GPCIS-------GSSRPLGPASVLEHLLALCPPGGLLLFLSALP--EDVVSGLKPFSASNRETNEEIVKQYFLNVYCS 488 (1304)
T ss_pred --CceEE-------EecCCCCcchHHHHHHHHhccCceEEEhhhCC--hHHhhhhhcccccchhHHHHHhhhhhcccccc
Confidence 45542 39999999999999999999889999999999 778999999999999998
Q ss_pred --EEEEcCC--------CHHHHHHHHHHcCCCeEEEEEEEcCCeEEEEeCcccccccCCCCCCCCCeEEcchhhhhCCCC
Q 000572 654 --AVLVKPE--------SRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMP 723 (1414)
Q Consensus 654 --ll~V~pe--------~~~~l~~i~~~~~~~~~vIG~vt~~~~l~l~~~~~~~~~~~~~~~~~~~~~dl~~~~l~~~~p 723 (1414)
.++|+++ +++.|+++|++++||+++||++|+++++++.++. .+..++|++++.++++.|
T Consensus 489 ~~~l~i~~~~~~~~~~~~l~~l~~ic~rercp~~vvG~~t~~~~~~~~d~~-----------~~~~p~dl~~~~~~~~~~ 557 (1304)
T PHA03366 489 VVFLVIKNTHEGGEGVTPLDALKRACRLAGCPVHILGRTVPLPGIHFVNDL-----------GNPVYGELRDDQFKPTFP 557 (1304)
T ss_pred eEEEEEcCcccccccccHHHHHHHHHHHcCCCEEEEEEEecCCcEEEEcCC-----------CCCCCcCcchhhhcccCC
Confidence 8999999 9999999999999999999999999999998752 355899999999976665
Q ss_pred Cce----------ecccccCCCCCCCCCCCCCCHHHHHHHHHcCCCCCcchhhhhccccccCcccccccccCCCCCCcCc
Q 000572 724 QKT----------FEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLAD 793 (1414)
Q Consensus 724 ~~~----------~~~~~~~~~~~~~~~~~~~~l~~~l~~vL~~p~VaSK~~l~~~~D~~V~g~tv~~p~vGp~~~pg~D 793 (1414)
+.. ++.++..+...+++.+ ..+++++|++||+|||||||+|||+||||+|+|+|||||+|||+|+|++|
T Consensus 558 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~vL~~P~VaSK~~i~~~~Dr~V~G~ta~qqgVGP~q~PvaD 636 (1304)
T PHA03366 558 LQPSRPLSPVSATSEDTRPSPQDESIDWA-LFNLNSTLLQILSHPTVGSKEYIVRHIDRCGNGRVAQQPGVGPLDLPVSD 636 (1304)
T ss_pred CCccccccccccccccccccCCCCCcCcc-cCCHHHHHHHHHcCCcccchhhhheecccccCCeEEeCCCcCcccCccCC
Confidence 554 3555544455566553 56899999999999999999999999999999999999999999999999
Q ss_pred EEEEEecC-----------------------------------------CCceEeEEEEccCCCCCCCCHHHHHHHHHHH
Q 000572 794 VAVIAQTY-----------------------------------------TDLTGGACAIGEQPIKGLLNPKAMARLAVGE 832 (1414)
Q Consensus 794 aAVi~~~~-----------------------------------------~~~~gla~s~g~~p~~~~~dP~~ga~~AV~e 832 (1414)
|||++++. .+.+|+||++|++|+++.+||+.||++||+|
T Consensus 637 ~aVv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~A~siGe~p~~~~lDP~~Ga~~AVaE 716 (1304)
T PHA03366 637 YSIVVHSSVKTRRAIETPSSTEDLTYQEADELINSPLTWFDPDDESVLHPAVPGTCSALGEQGYKVQLDPILGAKYAIVE 716 (1304)
T ss_pred EEEEEEecccccccccccccccccccchhhhhhccccccccccccccccCCCCEEEEecCCCceEEEcCHHHHHHHHHHH
Confidence 99999843 1357999999999999999999999999999
Q ss_pred HhhchhccCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEE
Q 000572 833 ALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVIS 912 (1414)
Q Consensus 833 alsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvit 912 (1414)
|++||+++|+.|+.++.+++||+||+. |++.++|++++++|+|+|++|||||++||+|+||++..+++.+..||++++|
T Consensus 717 Al~NL~aa~~~~L~~i~lslNf~wP~~-p~~~a~L~eav~ai~e~C~~LgIpIv~G~~S~yne~~~~~~~i~~pptIvis 795 (1304)
T PHA03366 717 ALTNLMLAPVANLEDITITLSVTWPPT-DQAASELYRALAACKEFCRELGVNFTFTSASSSPRQDQPPQPGPLFNTIVFT 795 (1304)
T ss_pred HHHHHhhcCCccchheEEEEEecCCCC-cchHHHHHHHHHHHHHHHHHcCCCEeeeecccccccCCCCccccCCCeEEEE
Confidence 999999999999988999999999985 6788999999999999999999999999999999742233567788999999
Q ss_pred EEEEcCCCCcccCCCccCCCCcEEEEEEcCCCccccchHHHHHHhhhcCCCCCCCCChHHHHHHHHHHHHHHhccCceEE
Q 000572 913 VYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTG 992 (1414)
Q Consensus 913 a~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~LGGS~la~~~~~~~~~~p~v~d~~~lk~~~~~v~~l~~~g~v~A~ 992 (1414)
+++.|+|+++++||++|++|+ .|++|++++ ..+||||+|++++++.++.+|++ |++.++++|+++++++++|+|.|+
T Consensus 796 g~~~~~dv~k~vTp~lk~~G~-~L~lIg~~~-~~~LgGS~laq~~~~~g~~~P~v-d~~~lk~~f~~v~~Li~~glI~A~ 872 (1304)
T PHA03366 796 ASAPVPSSTPRLTPDLKKPGS-ALVHLSISP-EYTLAGSVFEQIFGLKSGTLPDI-SPSYLKNLFRAVQHLISEGLVVSG 872 (1304)
T ss_pred EEEEccCcccccCcccCCCCC-EEEEEeCCC-CCCcchhHHHHhhccccCCCCCC-CHHHHHHHHHHHHHHHHcCCeEEE
Confidence 999999999999999999997 788987764 47899999999999888899999 899999999999999999999999
Q ss_pred EeCCCCchHHHHHHHHhcCCeEEEEEeCCCCCchHHHhcccccceEEEEecCCHHHHHHHHHHcCCCEEEEEEEeCCCc-
Q 000572 993 HDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHS- 1071 (1414)
Q Consensus 993 hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~~~~~~~LFsE~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~- 1071 (1414)
||||||||++||+||||++++|++|+++.. .+++..||+|++|+|++|++++.++++++|++.|+++.+||+|++++.
T Consensus 873 HDVSdGGL~~ALaEMAfag~~G~~Idl~~~-~d~~~~LFsE~~G~VveV~~~~~~~v~~~l~~~gi~~~vIG~vt~~~~~ 951 (1304)
T PHA03366 873 HDVSDGGLIACLAEMALAGGRGVTITVPAG-EDPLQFLFSETPGVVIEVPPSHLSAVLTRLRSRNIICYPIGTVGPSGPS 951 (1304)
T ss_pred EECCcCHHHHHHHHHHHhCCCcEEEEeCCC-CCHHHHHhCCCCeEEEEEchhHHHHHHHHHHHCCCCeEEEEEEcCCCce
Confidence 999999999999999999999999999642 356788999999999999999999999999999999999999998766
Q ss_pred --EEEEECCEEEEeccHHHHHHHhhhccHHHHhhhccccchhhhhhccc---ccC-CC--ceeeeeCCCcchhhccccCC
Q 000572 1072 --VEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLK---SRC-EP--LWKLSFTPSLTDEKYMNATS 1143 (1414)
Q Consensus 1072 --l~i~~~g~~i~~~~~~~L~~~W~~~s~~~~~~~~~~~~~~~e~~~~~---~~~-~~--~~~l~~~~~~~~~~~~~~~~ 1143 (1414)
++|..+++.+++.++++|+++|+++||++++.+.++.| ++|+.... +.. .+ ...++++|...... +..
T Consensus 952 ~~l~I~~~~~~l~~~~l~eL~~~W~~ts~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 1027 (1304)
T PHA03366 952 NTFSVSHNGTVLFRESLSSLRSTWRSFSDEQFELLRPDLT-EESMYRKDYGNNEVDLGPLEEGLTTSPLRLYTC---PDK 1027 (1304)
T ss_pred EEEEEEECCEEEEecCHHHHHHHHHHHHHHHHHHhcCChh-hhHHHHhhcccccccccCccccccCCchhcccC---CCC
Confidence 88888888889999999999999999999977766666 44432211 101 12 23455554322111 457
Q ss_pred CCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHH
Q 000572 1144 KPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~ 1223 (1414)
+|||+||++||+||++||++||+++||++++|||+||..+.. |++|++|+|||||||||++++|++||+++++|+.+++
T Consensus 1028 ~prVaIl~~pG~N~~~e~~~Af~~aGf~~~~v~~~dL~~~~~-l~~f~glv~~GGFS~gD~l~~~~~~a~~il~n~~~~~ 1106 (1304)
T PHA03366 1028 RHRVAVLLLPGCPGPHALLAAFTNAGFDPYPVSIEELKDGTF-LDEFSGLVIGGSSGAEDSYTGARAAVAALLSNPAVRD 1106 (1304)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHcCCceEEEEeecCCCCCc-cccceEEEEcCCCCCcccccHHHHHHHHhhhchHHHH
Confidence 899999999999999999999999999999999999998877 9999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCeEEEEeh-hhHHHHhcCccCCCCCCCccCCCCCCCC-CeeeecCCCceEEeeEEEEEcc-CCCccccCC
Q 000572 1224 QFQEFYKRPDTFSLGVCN-GCQLMALLGWIPGPQVGGVHGAGGDPSQ-PRFVHNESGRFECRFSSVTIED-SPAIMLKGM 1300 (1414)
Q Consensus 1224 ~i~~f~~~~~~piLGIC~-G~QlL~~lgllp~~~g~~~~~~~~~~~~-p~l~~N~s~~fe~r~v~v~i~~-~~s~~l~g~ 1300 (1414)
+|++|++|+|+|+||||| |||+|+++|+||+.++......+....| |+|++|+|+||||||++|+|++ ++|+||++|
T Consensus 1107 ~~~~f~~r~dt~~LGiCN~G~Q~L~~lgll~~~~~~~~p~g~i~~~~~~~l~~N~s~rfesr~~~v~i~~~s~Si~l~~~ 1186 (1304)
T PHA03366 1107 ALLRFLNRPDTFSLGCGELGCQILFALKAVGSTAPSPVPGTETEEQWPITLEPNASGLYESRWLNFYIPETTKSVALRPL 1186 (1304)
T ss_pred HHHHHHhCCCCeEEEeCcHHHHHHHHcCCccCCccccccccccccCCCCeEeeeCCCCeEeeceEEEeCCCCCCcccccc
Confidence 999999889999999999 9999999999964332210000111225 8999999999999999999998 999999999
Q ss_pred CCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCC---CCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCc
Q 000572 1301 EGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDD---GNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPE 1377 (1414)
Q Consensus 1301 ~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~---g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPE 1377 (1414)
+|+++|+|++|+++|+.|++++.+++|.++|||++||+|++ |++|++||+||||| ++||||||+||||+|||||||
T Consensus 1187 ~Gs~lP~w~~g~~~~~~~~~~~~~~~l~~~~~ia~~Y~d~~~~~g~~t~~yP~NPNGS-~~IaGi~s~dGR~l~mMphPe 1265 (1304)
T PHA03366 1187 RGSVLPCWAQGTHLGFRYPNDGMEYILRNSGQIAATFHGADVDPGNPARHYPRNPTGN-SNVAGLCSADGRHLALLFDPS 1265 (1304)
T ss_pred CCCCCCEEeCCCccccccCCHHHHHHHHhCCcEEEEEeCCCCCcCccccCCCCCCCcC-cceeeEECCCCCEEEecCCHH
Confidence 99999999888888999988889999999999999999988 68999999999999 999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCCChhHHHHHHHHHhhC
Q 000572 1378 RCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS 1414 (1414)
Q Consensus 1378 r~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~~ 1414 (1414)
|++++|||||+|++|. +.++|||++||+||++||.
T Consensus 1266 r~~~~~q~~~~P~~~~--~~~~sPW~~mF~na~~W~~ 1300 (1304)
T PHA03366 1266 LSFHPWQWQHVPPENG--PLKVSPWKLMFQDLHLWCL 1300 (1304)
T ss_pred HhhhhhhCCCCCcccC--CCCCChHHHHHHHHHHHHH
Confidence 9999999999999883 3568999999999999984
|
|
| >TIGR01739 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM-synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-157 Score=1542.45 Aligned_cols=927 Identities=25% Similarity=0.336 Sum_probs=785.3
Q ss_pred CceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccc
Q 000572 431 GSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRRE 510 (1414)
Q Consensus 431 GA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~ 510 (1414)
|..|+|...++.+-.|.. ... ++.. -...+...+.+--....|+||+|+++|++++++... ++...
T Consensus 192 ~~~~~a~~~G~y~~~p~~-~~~---------~~~~--~~~~~~~~~~~~~~~~ln~~G~P~i~Gf~r~~~~~~--~~~~~ 257 (1202)
T TIGR01739 192 GVMPVASQLGLYYQTPAL-TGE---------QDLP--LSRKMSTAMLQAQASALRASGVPTCGGFIRLISKNK--LSLPT 257 (1202)
T ss_pred cCchhhhccceEEecCCC-CCc---------ccch--hHHHHHHHHHHHHHHHHHhcCCCccceEEEEecccc--ccccc
Confidence 788888888887644321 110 1110 122333456667778899999999999999886432 22223
Q ss_pred cCCceEEEEEEEeeeCcccccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHH
Q 000572 511 WLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVR 590 (1414)
Q Consensus 511 ~~~Plv~~~~vG~v~~~~i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~ 590 (1414)
..||||+++++|.++..++.+...++||.||++|++.+++|+||+++++ +.+|++++++|+.++
T Consensus 258 ~~kpim~~G~lg~i~~~~~~k~~~~~G~~iV~lGg~~~~~G~~G~~~s~----------------~~s~~~~~~iq~~i~ 321 (1202)
T TIGR01739 258 PYTPTYNTSILDRLCHVTINTADEPPGQDIVALGQFEPSLLPDTPPLLY----------------ADSPLDVNKILTALA 321 (1202)
T ss_pred CCCCeEEccccCCCChhhcccccCCCCCEEEEECCCCCCCCCCCCcccc----------------CCCHHHHHHHHHHHH
Confidence 4499999999999998888777799999999999999999999998542 346899999999999
Q ss_pred HHHHhhccC-CceEEEcCCCCcHHHHHHHHhcCCeEEEEeCCCCCCC----CCccHHHH----------hcccccceeEE
Q 000572 591 ACIEMGETN-PIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGD----HTLSVLEI----------WGAEYQEQDAV 655 (1414)
Q Consensus 591 ~~~~l~~~~-~i~a~~DigaGGL~~aL~Ela~~~Ga~Idl~~iP~~~----~~l~p~ei----------~~sEsqer~ll 655 (1414)
.|.+++... ...++||+|+||++++|+||++++|++||++++|... ..++++++ |++|+|+|+++
T Consensus 322 ~~~~~~~~~~i~~sI~D~Gagg~sn~l~El~~~~G~~i~L~~lP~~~~s~L~~~~~~~~e~~e~~v~~~~~N~~~~~~~L 401 (1202)
T TIGR01739 322 LLTDDVKTPCIVGSIRPLGPCSVKEHLTALLPPCGAELDLSNLPDEVVAALARSSPANRVENEKMVKQYFLNVVCSVVFL 401 (1202)
T ss_pred HHHHhccCCeeEEEecCCCCchHHHHHHHHhccCceEEEhHhCCchhhccccCCChhhhHHHHHHhhhhcccccceeEEE
Confidence 988766432 2399999999999999999999889999999999884 45566654 99999999999
Q ss_pred EEcC----------CCHHHHHHHHHHcCCCeEEEEEEEcCCeEEEEeCcccccccCCCCCCC-CCeEEcchhhhhCCCCC
Q 000572 656 LVKP----------ESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPP-PPAVDLELERVLGDMPQ 724 (1414)
Q Consensus 656 ~V~p----------e~~~~l~~i~~~~~~~~~vIG~vt~~~~l~l~~~~~~~~~~~~~~~~~-~~~~dl~~~~l~~~~p~ 724 (1414)
+|++ ++++.|+++|++++||+++||++|+++++++.++. +++ ..++||++..+++++|+
T Consensus 402 aV~~~~~~~~~~~~~~l~~~~~ic~re~cp~~vlG~~t~~~~l~v~~~~----------~~~~~~~vd~~~~~~~~~~P~ 471 (1202)
T TIGR01739 402 TVKNTPHNTGTEGVTPLERLKTACRMFGCPVKVLGKLVPLPGLHIVSDL----------FNPVPTYPTFDFTSFTPTSPL 471 (1202)
T ss_pred EECCcccccccccchHHHHHHHHHHHCCCCEEEEEEEeCCCcEEEEeCC----------CCCCCCCccchhhhccCCCCC
Confidence 9999 79999999999999999999999999999998852 111 37899999999999999
Q ss_pred ceec----ccccCC--CCCCCCCCCCCCHHHHHHHHHcCCCCCcchhhhhccccccCcccccccccCCCCCCcCcEEEEE
Q 000572 725 KTFE----FHHADQ--AREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIA 798 (1414)
Q Consensus 725 ~~~~----~~~~~~--~~~~~~~~~~~~l~~~l~~vL~~p~VaSK~~l~~~~D~~V~g~tv~~p~vGp~~~pg~DaAVi~ 798 (1414)
+.+. +.+..+ ...+++. ...++++++++||+|||||||+|||+||||+|||+|||||+|||||+|++||||++
T Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~vL~~P~V~SK~~i~~q~Dr~V~G~tv~~pgVGP~d~PvaD~aVv~ 550 (1202)
T TIGR01739 472 LPLGGPEPVSRTRPMFLDESLNW-QTLNLRSTILKILSHPTVGSKEFIVRHIDRCGNGRVAQQQGVGPLDLPVSDYSLVL 550 (1202)
T ss_pred cccccccccccccccccCCCCCC-CccCHHHHHHHHhcCCcccchhhHhhhcCceeCCceeccCCcCCCCCCCCCeEEEE
Confidence 9986 322111 1233333 34689999999999999999999999999999999999999999999999999999
Q ss_pred e--c---C-------------------------------CCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCc
Q 000572 799 Q--T---Y-------------------------------TDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKV 842 (1414)
Q Consensus 799 ~--~---~-------------------------------~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga 842 (1414)
+ . + .+.+|+||++|++|+++.+||+.||++||+|+++||+++|+
T Consensus 551 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~G~a~a~Ge~p~~~~~DP~~ga~~AV~Ea~~Nlaaa~~ 630 (1202)
T TIGR01739 551 HNLSRPTDTTEVTYSENAMDLILDPDSWLYSWENEVLENPALSCVCSALGEQTYKVQADPKRGATYAITEALLNLSLSPW 630 (1202)
T ss_pred ecccccccccccccccccccccccccccccccccccccCCCceEEEEecCCCceEEEcCHHHHHHHHHHHHHHHHHhCCc
Confidence 8 3 0 02379999999999999999999999999999999999988
Q ss_pred ccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecC-CcEEEEEEEEcCCCC
Q 000572 843 TSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAP-GSLVISVYVTCPDIT 921 (1414)
Q Consensus 843 ~Pl~~v~ls~n~~~p~~~~~e~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~p-ptlvita~G~v~d~~ 921 (1414)
.-+..+.++.||+||++. +..++|++++++|+|+|++|||||+|||+|+++. . .++..| |++++|+++.++|++
T Consensus 631 ~~l~pi~lt~n~~~P~~~-~~~~~L~~av~ai~e~C~~Lgipiv~G~~S~s~~---~-~~v~~Ptptivisa~a~v~dv~ 705 (1202)
T TIGR01739 631 NTLEDVIITLSVTWSPTD-HVYSLLKDALRACKDFCEELGVSFTVTSAASSPT---Q-DSGSAPFMSIVFSASCPVLLSA 705 (1202)
T ss_pred cccCCcEEEEEecCCCCC-chHHHHHHHHHHHHHHHHHcCCcEEeeeccccCC---C-CCccCCCCeEEEEEEEEecCHH
Confidence 445567777899999853 4578899999999999999999999999999764 2 346667 899999999999999
Q ss_pred cccCCCccCCCCcEEEEEEcCCCccccchHHHHHHhhhcCCCCCCCCChHHHHHHHHHHHHHHhccCceEEEeCCCCchH
Q 000572 922 KTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLL 1001 (1414)
Q Consensus 922 ~~lt~~~k~~Gd~~li~v~lg~~~~~LGGS~la~~~~~~~~~~p~v~d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~ 1001 (1414)
+++||++|++|+ .|++|++++ +.+||||+|++++++.++.+|++ |++.++++++++++++++++|.||||+|||||+
T Consensus 706 k~vTp~lk~~G~-~L~LIg~t~-~~~LgGS~laq~~~~~~~~~P~v-d~~~lk~~~~~v~~li~~glI~S~HDvSdGGL~ 782 (1202)
T TIGR01739 706 KKITPDLKSHGS-HLIWLSLHP-SYTLAGSIFEQILGLSFIRLPAL-SPVSLKKLLSALQTLVKEGVIVSGHDVSDGGLV 782 (1202)
T ss_pred hCcCcccCCCCC-EEEEEcCCC-CCCchHhHHHHhhccccCCCCCC-CHHHHHHHHHHHHHHHhcCCEEEEEECCcCHHH
Confidence 999999999997 788886653 47899999999988888889999 899999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeEEEEEeCCCCCchHHHhcccccceEEEEecCCHHHHHHHHHHcCCCEEEEEEEeC---CCcEEEEECC
Q 000572 1002 VCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNS---SHSVEIKVDG 1078 (1414)
Q Consensus 1002 ~aL~EMa~as~~G~~Idl~~~~~~~~~~LFsE~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~---~~~l~i~~~g 1078 (1414)
++|+|||++|++|++|+++.. .+++..||+|++|+|++|++++.+++++.|+++|+++.+||+|++ ++.++|.+++
T Consensus 783 ~aLaEMA~ag~~G~~Idl~~~-~~p~~~LFSEs~G~VieV~~~~~~~v~~~l~~~gi~~~vIG~vt~~~~~~~l~I~~~~ 861 (1202)
T TIGR01739 783 ACVAEMALSGGKGVRITLPHG-TDPLEFLCSETPGVVIEVDPSSMYAVLQFLRSEGLVFQVIGRVGESGPSPTFSVVHNS 861 (1202)
T ss_pred HHHHHHHHhCCCcEEEEeCCC-CCHHHHHhCCCCcEEEEEchhHHHHHHHHHHHCCCCeEEEEEECCCCCCcEEEEEECC
Confidence 999999999999999999743 467788999999999999999999999999999999999999986 4678888899
Q ss_pred EEEEeccHHHHHHHhhhccHHHHhhhccccchhhhhhcccccC-CCceee--eeCCCcchhhccccCCCCEEEEEecCCC
Q 000572 1079 LTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEKEGLKSRC-EPLWKL--SFTPSLTDEKYMNATSKPKVAVIREEGS 1155 (1414)
Q Consensus 1079 ~~i~~~~~~~L~~~W~~~s~~~~~~~~~~~~~~~e~~~~~~~~-~~~~~l--~~~~~~~~~~~~~~~~~~kVaIl~~~G~ 1155 (1414)
+.+++.++++|+++|++++|++++++++..+.++ .+..+... ...+.. +|+|.........+..+|||+||++||+
T Consensus 862 ~~l~~~~l~~L~~~W~~ts~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~VaIl~~pG~ 940 (1202)
T TIGR01739 862 TVLFQEPLSLLQGTWRSFSDEENTLLCPNLEPRE-MHVLDYGYNEMDFGGVPKGLPLSPLRFFTCPDPRHQVAVLLLPGQ 940 (1202)
T ss_pred EEEEEecHHHHHHHHHHHHHHHHhhhcchhhhhh-hcccCcCcchhhcccccccCcccccccccCCCCCCeEEEEeCCCC
Confidence 9899999999999999999999999943333221 11111000 111111 4555443222222456899999999999
Q ss_pred cCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCe
Q 000572 1156 NGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTF 1235 (1414)
Q Consensus 1156 n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~p 1235 (1414)
||++||++||+++||++++|||+||..+. .|++|++|+|||||||+|.+++|++||+++++|+.++++|++|++|+|+|
T Consensus 941 N~~~e~~~Af~~aGf~~~~v~~~dl~~~~-~l~~f~glv~~Ggfsy~D~lgsg~~~a~~il~n~~~~~~~~~f~~r~dtf 1019 (1202)
T TIGR01739 941 SVPHGLLAALTNAGFDPRIVSITELKKTD-FLDTFSGLIIGGASGTLDSEVGARALAAALLRNQAFLRDLLTFLNRPDTF 1019 (1202)
T ss_pred CCHHHHHHHHHHcCCceEEEEeccCCCCC-chhheEEEEEcCcCCCCccchHHHHHHHHhhcchHHHHHHHHHHhCCCce
Confidence 99999999999999999999999998776 68999999999999999999999999999999999999999999889999
Q ss_pred EEEEeh-hhHHHHhcCccCCCCCCCc--cCCCCCCCCCeeeecCCCceEEeeEEEEEcc-CCCccccCCCCcEEEEEEee
Q 000572 1236 SLGVCN-GCQLMALLGWIPGPQVGGV--HGAGGDPSQPRFVHNESGRFECRFSSVTIED-SPAIMLKGMEGSTLGVWAAH 1311 (1414)
Q Consensus 1236 iLGIC~-G~QlL~~lgllp~~~g~~~--~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~-~~s~~l~g~~g~~~~~~~~H 1311 (1414)
+||||| |||||+++|+||+.+.... ...+. ..+|+|++|+|+||||||++++|++ ++|+||++|+|+++|+|+ |
T Consensus 1020 ~LGiCN~G~Q~L~~lg~l~~~~~~~~~~~~~~~-~~~~~l~~N~s~~fesr~~~v~i~~~s~si~~~~~~g~~lp~wv-~ 1097 (1202)
T TIGR01739 1020 SLGFGELGCQLLLALNIVGYTQSSPFITVPTEV-QEPPRLEKNASGLYESRWLNFYIPETTKSVFLRPLRGSVLPCWA-Q 1097 (1202)
T ss_pred EEEeCcHHHHHHHHcCCCcCCcccccccccccc-cCCceeeecCCCCeEEeeeEEEeCCCCCChhhhhcCCCEeccce-E
Confidence 999999 9999999999997654310 00112 2399999999999999999999998 999999999999999999 6
Q ss_pred ccc-eEEeCChhhHHHHhhcCceEEEEecCCC---CCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccccccCCC
Q 000572 1312 GEG-RAYFPDDGVLDRILHSHLAPVRYCDDDG---NPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPW 1387 (1414)
Q Consensus 1312 geG-r~~~~~~~~~~~l~~~~~i~~~Y~d~~g---~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~~~ 1387 (1414)
||+ +++|++++.+++|.++|||++||+|.+| ++|++||+||||| .+||||||+||||+||||||||++++|||||
T Consensus 1098 g~~~g~~~~~~~~~~~l~~~g~va~~Y~d~~~~~g~~a~~yP~NPNGS-~~IAGi~s~dGR~l~lMphPer~~~~~q~~~ 1176 (1202)
T TIGR01739 1098 GTHLGLYHPDDGVEEELENSGQIASTFHGNSPSSGLPATNYPRNPSGG-SNVAGLCSADGRHLALLIDPSLSFFPWQWQH 1176 (1202)
T ss_pred eccCCcEECCHHHHHHHHhCCeEEEEEeCCCCCCCccccCCCCCCCcC-cceeeEECCCCCEEEecCCHHHhhhhhhCCC
Confidence 653 6778788899999999999999999754 7999999999999 8999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHhhC
Q 000572 1388 YPKNWNVDKKGPSPWLKMFQNAREWCS 1414 (1414)
Q Consensus 1388 ~p~~~~~~~~~~spw~~~F~na~~~~~ 1414 (1414)
+|++|. +.+.|||++||+||++||.
T Consensus 1177 ~P~~~~--~~~~sPW~~mF~na~~W~~ 1201 (1202)
T TIGR01739 1177 VPPNNP--PLQVSPWKLMFQRLHLWSL 1201 (1202)
T ss_pred CCcccc--CCCCChHHHHHHHHHHHHh
Confidence 999883 4578999999999999983
|
This model describes a family of large proteins of herpesvirues. The protein is described variably as tegument protein or phosphoribosylformylglycinamidine synthase (FGAM-synthase). Most of the length of the protein shows homology to eukaryotic FGAM-synthase. Functional characterizations were not verified during construction of this model. |
| >COG0046 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-148 Score=1351.45 Aligned_cols=732 Identities=33% Similarity=0.484 Sum_probs=639.9
Q ss_pred EEecccCCHHHHHHHHHhCCCCCChhhHHHHHHHHHhhcCCCCCHHHHHHHHhhhccccccceeeeEEEEcCcccchhHH
Q 000572 263 FVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLM 342 (1414)
Q Consensus 263 ~v~~~~~~~~~l~~~~~~~gLal~~~el~~~~~~f~~~l~R~Pt~~El~~~~q~wSEHCrhk~F~~~~~~d~~~~~~~lf 342 (1414)
.+++++.++++|++.+.++||+|+++||+||++ | .+||+||++||+||+|+||||||||+| +++|
T Consensus 2 ~~~~~~~~~~~l~~~~~~~gl~L~~dE~~~i~~-~--~~GR~P~~~El~mf~~~WSEHC~yKss------------k~~l 66 (743)
T COG0046 2 MVDFLSGSREALEKANTELGLALSDDEYDYIRE-F--LLGREPTDTELGMFAQMWSEHCSYKSS------------KSLL 66 (743)
T ss_pred cccccccchhhhhccchHhhcCCCHHHHHHHHH-H--hcCCCCcHHHHHHHHHHHhhhcCccch------------HHHH
Confidence 356778899999999999999999999999999 8 478999999999999999999999987 4677
Q ss_pred HHHHHHhccCCCCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhcccccc
Q 000572 343 QIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRI 422 (1414)
Q Consensus 343 ~~I~~~~~~~~~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~i 422 (1414)
++|+.++ .++++++|++|||+|++ ++|+++++||||||||||+|+||+||+||+||.|
T Consensus 67 k~~~~t~--~~~~vi~g~gdnAgvvd--------------------i~d~~~v~fKvESHNHPSaIePy~GAATGvGGiI 124 (743)
T COG0046 67 KMFPTTH--TGEYVLSGPGDNAGVVD--------------------IGDGWAVVFKVESHNHPSAIEPYQGAATGVGGII 124 (743)
T ss_pred hhCCCCC--CCCeEEEcccCCcceEE--------------------eCCcEEEEEEeccCCCCCccCCCCCcccccCcee
Confidence 7776554 36789999999999876 4577999999999999999999999999999999
Q ss_pred cchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccc
Q 000572 423 RDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMR 502 (1414)
Q Consensus 423 rDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~ 502 (1414)
||+.|| ||+|+|++++|.||.|..| .+++|+.+++.|+++|+|++|+|+|||+++ |+..
T Consensus 125 RDv~sm--GArPiA~l~~l~fG~~~~~------------------~~~~i~~gvv~Gia~YGN~iGvPtv~Ge~~-fd~~ 183 (743)
T COG0046 125 RDVLSM--GARPIALLDSLRFGIPDIE------------------KTRYIMKGVVAGIAAYGNEIGVPTVGGEFR-FDES 183 (743)
T ss_pred eccccc--CceeeeeecccccCCCCCc------------------hhhhHHhccccchhhcCccccccccceEEE-Eccc
Confidence 999999 9999999999999965433 357899999999999999999999999996 4332
Q ss_pred cCCCCccccCCceEEEEEEEeeeCcccccCC-CCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHH
Q 000572 503 LPSGQRREWLKPIMFSGGIGQIDHNHISKGE-PDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEM 581 (1414)
Q Consensus 503 ~~~g~~~~~~~Plv~~~~vG~v~~~~i~r~~-a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~ 581 (1414)
..++|||+++++|.++++++.++. .+|||.|+++|++|||||+||+++||+.+++.++++++++||++||+|
T Consensus 184 -------y~~npLvna~~vG~i~~~~i~~~~a~~~G~~li~~Gg~TgrDGigGat~aS~~~~~~~~e~dr~aVQvGdPf~ 256 (743)
T COG0046 184 -------YVGNPLVNAGCVGLIRKEHIVKGEAIGPGDKLILLGGKTGRDGIGGATFASMELGEESEEEDRPSVQVGDPFM 256 (743)
T ss_pred -------cCCCceEEEEEeeecchhheeeccCCCCCCEEEEEcCCccccccCchhhhhhhhCcchhhhcCCccccCChHH
Confidence 358999999999999999999977 699999999999999999999999999998777888999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCCCccHHHHhcccccceeEEEEcC
Q 000572 582 AQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKP 659 (1414)
Q Consensus 582 e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~p 659 (1414)
||++++ +|+++.+.++|.+|||+|||||++++.||+. +.|++|+||+||+++++|+|+|||+|||||||+++|.|
T Consensus 257 Ek~l~e---a~le~~~~~~I~~i~DlGAgGLs~A~~Ela~~gg~G~~i~Ld~VP~rE~gMsp~Ei~~SESQERMllvv~p 333 (743)
T COG0046 257 EKRLQE---AILECVQTGLIKGIQDLGAGGLSCAISELAAKGGLGAEIDLDKVPLREPGMSPYEIWLSESQERMLLVVAP 333 (743)
T ss_pred HHHHHH---HHHHHHhcCCeEEEeccCCchhhhhHHHHHhccCCeEEEEhhcCcccCCCCCHHHHHHhccchheEEEEcc
Confidence 999866 5555557899999999999999999999999 89999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCeEEEEEEEcCCeEEEEeCcccccccCCCCCCCCCeEEcchhhhhCCCCCceecccccCCCC-CC
Q 000572 660 ESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAR-EP 738 (1414)
Q Consensus 660 e~~~~l~~i~~~~~~~~~vIG~vt~~~~l~l~~~~~~~~~~~~~~~~~~~~~dl~~~~l~~~~p~~~~~~~~~~~~~-~~ 738 (1414)
++.++|+++|+||+++++|||+||+++++++.+ .++.++|||+++|.+++|+|+|+...+.+.. .+
T Consensus 334 ~~~e~~~~i~~k~~l~~aVVG~vT~~~~~~~~~-------------~ge~v~dlP~~~L~~~aP~~~r~~~~~~~~~~~~ 400 (743)
T COG0046 334 EDVEEFLEICEKERLPAAVVGEVTDEPRLVVDW-------------KGEPVVDLPIDVLAGKAPKYDRPVKEPKKEEAGD 400 (743)
T ss_pred ccHHHHHHHHHHcCCCeEEEEEEecCceEEEEE-------------CCCEEEeccHHHHcCCCCeeeccccccccccccc
Confidence 999999999999999999999999999999988 4899999999999999999999976554321 12
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCCcchhhhhccccccCcccccccccCCCCCCcCcEEEEEecCCC--ceEeEEEEccCCC
Q 000572 739 LDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTD--LTGGACAIGEQPI 816 (1414)
Q Consensus 739 ~~~~~~~~l~~~l~~vL~~p~VaSK~~l~~~~D~~V~g~tv~~p~vGp~~~pg~DaAVi~~~~~~--~~gla~s~g~~p~ 816 (1414)
...+...++++++++||++||||||+|||+||||+|||+|+++| || +.||||+++...+ .+++|||+|++|+
T Consensus 401 ~~~~~~~~l~~a~~~vL~~p~vask~~l~~qyD~~V~~~Tv~~p--G~----~~DaaV~r~~~~~~~~~g~A~t~~~np~ 474 (743)
T COG0046 401 VPEPEEPDLEEALLKVLSSPNVASKEWLYEQYDRSVGGNTVVDP--GP----VADAAVLRISEDSGTGKGLAMTTGENPR 474 (743)
T ss_pred cCCCCcccHHHHHHHHhcCcchhhhcceeeecceeeccceeecC--CC----CcceEEEEecccCCCcceEEEEcCCCCc
Confidence 22234456999999999999999999999999999999999998 66 7899999998432 2379999999999
Q ss_pred CCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhCCccccccccccccc
Q 000572 817 KGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAA 896 (1414)
Q Consensus 817 ~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~ 896 (1414)
++++|||++|++||+||+|||+|+||+|++..++ +||+.|++ |+...++.++++|+.|+|++||+||+||||||||++
T Consensus 475 ~~~ldpy~Ga~~aVaEa~rNl~a~Ga~pla~~d~-lnfg~pe~-pE~~~q~~~a~~g~~eac~~l~~pvv~GnvSlynet 552 (743)
T COG0046 475 YALLDPYAGAKLAVAEALRNLAATGAKPLALTDN-LNFGNPEK-PEVMGQFVAAVAGLAEACRALGIPVVGGNVSLYNET 552 (743)
T ss_pred ceEEChhHHHHHHHHHHHHHHHhhCCcchhhhhh-hccCCCCC-hhhhhHHHHHHHHHHHHHHHhCCCcccceeeeeecc
Confidence 9999999999999999999999999999774433 56655543 222333446899999999999999999999999998
Q ss_pred ccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCccccchHHHHHHh-hhcCCCCCCCCChHHHHH
Q 000572 897 YSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVF-DQVGNESPDLEDVPYLKR 975 (1414)
Q Consensus 897 ~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~LGGS~la~~~-~~~~~~~p~v~d~~~lk~ 975 (1414)
.|. .+|||++|+++|.|+|+++++|+.+++.|+ .+ |+ +|.++.+||||.|++++ +...+.+|.+ |.+.+|+
T Consensus 553 ~~~----~i~PTpvi~~vg~v~dv~k~~~~~~~~~g~-~i-~l-lG~~~~~lggS~~~~~~~~~~~g~~p~~-dl~~ek~ 624 (743)
T COG0046 553 NGQ----PIPPTPVIGAVGLVEDVRKVLTPELKKAGL-LL-YL-LGETKDELGGSELAQVYHGLGDGPPPVV-DLAEEKK 624 (743)
T ss_pred CCc----ccCCcceEEEEEEeechhhhcCccccCCCc-EE-EE-eCCCccccchhHHHHHHhcccCCCCCCC-CHHHHHH
Confidence 653 679999999999999999999999998886 33 43 69999999999999975 4445556666 8999999
Q ss_pred HHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCCC-chHHHhcccccce-EEEEecCCHHHHHHHH
Q 000572 976 VFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGN-SLFQTLFAEELGL-VLEVSKSNLDTVSKKL 1053 (1414)
Q Consensus 976 ~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~~-~~~~~LFsE~~G~-vl~V~~~~~~~v~~~l 1053 (1414)
+++++++++++++++|+||+|+|||+++|+||||++++|++|+++.... ++...||+|++|+ |+++++++.. ....
T Consensus 625 ~~~~i~~~i~~~~v~aahD~s~GGL~~aLaemaf~~~~G~~i~~~~~~~~~~~~~LFsE~~gr~i~~~~~~~~~--~~~~ 702 (743)
T COG0046 625 FFDAIRALIADGKVLAAHDVSDGGLAVALAEMAFAGGIGLEIDLDELGDDRLDALLFSESLGRVIVVVAEEEAE--VEGA 702 (743)
T ss_pred HHHHHHHHHhcCceEEEEEcccccHHHHHHHHHhccCCceEEEcccccccchhhHhhCcCCCcEEEEecchhhh--hhhh
Confidence 9999999999999999999999999999999999999999999986421 4566799999997 5566655443 4445
Q ss_pred HHcCCCEEEEEEEeCCCcEEEEECCEEEEeccHHHHHHHhh
Q 000572 1054 HDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWE 1094 (1414)
Q Consensus 1054 ~~~gi~~~~IG~v~~~~~l~i~~~g~~i~~~~~~~L~~~W~ 1094 (1414)
+..++++.+||.++.+..+....+. .+++.+++++++.|+
T Consensus 703 ~~~~~~~~~~G~~~~~~~~~~~~~~-~~~~~~~~el~~~~~ 742 (743)
T COG0046 703 EAVGVPLKVIGLVGGDHEIGAAVNE-FLVPVSVEELREAWE 742 (743)
T ss_pred hhcCceeeeeeeccccceEeecccc-ccccccHHHHHHhhc
Confidence 5678899999999877665544444 347889999999996
|
|
| >PRK01213 phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-119 Score=1155.16 Aligned_cols=708 Identities=27% Similarity=0.374 Sum_probs=607.4
Q ss_pred HHHHhCCCCCChhhHHHHHHHHHhhcCCCCCHHHHHHHHhhhccccccceeeeEEEEcCcccchhHHHHHHHHhccCCCC
Q 000572 276 EINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNN 355 (1414)
Q Consensus 276 ~~~~~~gLal~~~el~~~~~~f~~~l~R~Pt~~El~~~~q~wSEHCrhk~F~~~~~~d~~~~~~~lf~~I~~~~~~~~~~ 355 (1414)
++.++ |+|+++|+++|++ .|||+|||+||+||+|+|||||+||+ .+++|+ ++...+++
T Consensus 6 ~~~~~--~~l~~~e~~~i~~----~l~r~p~~~el~~~~~~wsehc~~k~------------s~~~l~----~~~~~~~~ 63 (724)
T PRK01213 6 ELYAE--MGLTDDEYERIRE----ILGREPNFTELGMFSVMWSEHCSYKS------------SKPLLR----KFPTKGPR 63 (724)
T ss_pred HHHHH--cCCCHHHHHHHHH----HhCCCCCHHHHHHHHHHhhccccCCC------------CHHHHh----cCCCCCCc
Confidence 44455 5669999999987 48999999999999999999999996 234443 33334578
Q ss_pred ceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeE
Q 000572 356 SVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVV 435 (1414)
Q Consensus 356 ~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~ 435 (1414)
+++|++||||||+. ++++.+++++|+||||+++|||+||+|++++++||++|| ||+|+
T Consensus 64 v~~g~gdDaavi~~--------------------~~~~~lv~~~Esh~~p~~~~P~~ga~~~v~~~i~Di~am--Ga~P~ 121 (724)
T PRK01213 64 VLQGPGENAGVVDI--------------------GDGQAVVFKIESHNHPSAVEPYQGAATGVGGILRDIFSM--GARPI 121 (724)
T ss_pred EEEeeCCCceEEEc--------------------CCCcEEEEEeccCCCCCccCCccchhhcccceecccccc--Cceee
Confidence 99999999999973 246778899999999999999999999999999999999 99999
Q ss_pred EEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCCce
Q 000572 436 ASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPI 515 (1414)
Q Consensus 436 a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~Pl 515 (1414)
|++++|+|++++.| .+.++++++++|+++|||++|+|++||+|. +... ...+|+
T Consensus 122 a~~~~l~~~~~~~~------------------~~~~~l~~~~~Gi~~~~n~~Gvp~vgG~t~-~~~~-------~~~~p~ 175 (724)
T PRK01213 122 ALLDSLRFGELDHP------------------KTRYLLEGVVAGIGGYGNCIGVPTVGGEVY-FDES-------YNGNPL 175 (724)
T ss_pred eeeeEEEccCCCCC------------------cHHHHHHHHHHHHHHHHHhcCCCEeeEEEE-EeCC-------cCCCce
Confidence 99999999864211 357789999999999999999999999995 4221 124799
Q ss_pred EEEEEEEeeeCcccccCCCC-CCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHH
Q 000572 516 MFSGGIGQIDHNHISKGEPD-IGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIE 594 (1414)
Q Consensus 516 v~~~~vG~v~~~~i~r~~a~-~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~ 594 (1414)
+.++++|.++++++.|++++ |||.|+++|++||++|+||+++++....+. ...+.++||++||++++++ +++|++
T Consensus 176 v~~~~iG~~~~~~~~r~~~~~~Gd~Ii~~G~~tg~~Gigg~~~~s~~~~~~-~~~~~~~vq~g~~~~~~~l---~~~~~~ 251 (724)
T PRK01213 176 VNAMCVGLVRHDDIVLAKASGVGNPVVYVGAKTGRDGIGGASFASAELSEE-SEEKRPAVQVGDPFMEKLL---IEACLE 251 (724)
T ss_pred EEEEEEEEEcHHHcccCCCCCCCCEEEEeCCCcCcccCcHHHHHHhhhhcc-ccccCcccccCCcHHHHHH---HHHHHH
Confidence 99999999998888787765 999999999999999999998776544321 2346788999999999886 678888
Q ss_pred hhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHc
Q 000572 595 MGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERE 672 (1414)
Q Consensus 595 l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~ 672 (1414)
+.+.++|++|||+|+|||++++.|||+ ++|++|++++||+++.+++|+|+|++|+||||+++|+|++.++|+++|+++
T Consensus 252 ~~~~~~v~a~~D~g~gGL~~al~Ema~~s~~G~~I~ld~iP~~~~~~~p~ei~~sesqerml~~v~~~~~~~~~~~~~~~ 331 (724)
T PRK01213 252 LIKTGLVVGIQDMGAAGLTCSSSEMAAKGGLGIELDLDKVPLREEGMTPYEIMLSESQERMLLVVKPGKEEEVLAIFEKW 331 (724)
T ss_pred HhccCCEEEEEECCCCcHHHhHHHHhccCCcEEEEEcccccccCCCCCHHHHHhccccceEEEEECHHHHHHHHHHHHHc
Confidence 888899999999999999999999998 899999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEEEcCCeEEEEeCcccccccCCCCCCCCCeEEcchhhhhCCCCCceecccccCCCCCCCCCCCCCCHHHHHH
Q 000572 673 RVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLK 752 (1414)
Q Consensus 673 ~~~~~vIG~vt~~~~l~l~~~~~~~~~~~~~~~~~~~~~dl~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 752 (1414)
++++++||+||+++++++.+ +++.++|+|+++|++++|+++++.+.+++ ..++. +...+++++++
T Consensus 332 ~~~~~vIG~vt~~~~~~~~~-------------~g~~v~d~~~~~l~~~~p~~~~~~~~~~~-~~~~~-~~~~~l~~~~~ 396 (724)
T PRK01213 332 DLDAAVIGEVTDDGRLRVYH-------------HGEVVADVPAEALADEAPVYDRPYKEPAY-LDELQ-ADPEDLKEALL 396 (724)
T ss_pred CCCEEEEEEEecCCeEEEEE-------------CCeEEEEeEHHHhcCCCCceeccccCccc-ccccc-cCCcCHHHHHH
Confidence 99999999999999999987 48899999999999999999998754432 12222 22358999999
Q ss_pred HHHcCCCCCcchhhhhccccccCcccccccccCCCCCCcCcEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHHHHHH
Q 000572 753 RVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGE 832 (1414)
Q Consensus 753 ~vL~~p~VaSK~~l~~~~D~~V~g~tv~~p~vGp~~~pg~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~AV~e 832 (1414)
++|++||||||+||++||||+|+++|+++| |+||||+++.. +.+++++|+|.+|+++..|||.+|++||++
T Consensus 397 ~~l~~~~v~sk~~i~~~yD~~V~~~tv~~p--------GdDaAVi~~~~-~~~~l~~s~D~~~~~~~~~P~~~g~~AV~~ 467 (724)
T PRK01213 397 KLLSSPNIASKEWVYEQYDHEVQTNTVVKP--------GGDAAVLRIRG-GGKGLALTTDCNPRYVYLDPYEGAKLAVAE 467 (724)
T ss_pred HHhcCCcccchhhhhhccCceecCCccccC--------CCCeEEEEecC-CCEEEEEEecCCCCccccCHHHHHHHHHHH
Confidence 999999999999999999999999999654 58999999874 247899999999999999999999999999
Q ss_pred HhhchhccCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEE
Q 000572 833 ALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVIS 912 (1414)
Q Consensus 833 alsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvit 912 (1414)
|+|||+||||+|+. +..++||+.|+. ++...++.++++||.++|++||+|++||||||||++. ...+|||++++
T Consensus 468 avsdiaa~Ga~P~~-~~~~l~~~~p~~-~~~~~~l~~~~~Gi~~a~~~~gvpivGG~~s~~n~~~----~~~i~pt~~vt 541 (724)
T PRK01213 468 AARNLAAVGATPLA-ITDCLNFGNPEK-PEVMWQFVEAVRGLADACRALGTPVVGGNVSLYNETG----GTAIYPTPVIG 541 (724)
T ss_pred HHHHHhccCCeehh-heeeeecCCCCc-hHHHHHHHHHHHHHHHHHHHhCCCcccceeeeeCCCC----CcccCCcceEE
Confidence 99999999999976 555577765532 2112346789999999999999999999999998752 24568999999
Q ss_pred EEEEcCCCCcccCCCccCCCCcEEEEEEcCCCccccchHHHHHHh-hhcCCCCCCCCChHHHHHHHHHHHHHHhccCceE
Q 000572 913 VYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVF-DQVGNESPDLEDVPYLKRVFETVQDLIGDELVST 991 (1414)
Q Consensus 913 a~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~LGGS~la~~~-~~~~~~~p~v~d~~~lk~~~~~v~~l~~~g~v~A 991 (1414)
++|.+++.++++++.+|++|| .| |+ +|.+..++|||.+++.+ ++..+..|++ +.+.++.+++.+.++++.++|+|
T Consensus 542 ~vG~~~~~~~~~~~~~k~~GD-~I-~l-~g~~~~~~ggs~~~~~~~~~~~~~~p~~-~~~~~~~~~~~l~~l~~~g~v~a 617 (724)
T PRK01213 542 MVGLIDDVSKRTTSGFKKEGD-LI-YL-LGETKDELGGSEYLKVIHGHVGGRPPKV-DLEAEKRLQELVREAIREGLVTS 617 (724)
T ss_pred EEEEecCHhhCcChhcCCCCC-EE-EE-EcCCCCCccHHHHHHHhcCCcCCCCCCC-CHHHHHHHHHHHHHHHHCCCeEE
Confidence 999999878889999989998 44 44 47667789999988765 6556667877 77888999999999999999999
Q ss_pred EEeCCCCchHHHHHHHHhcCCeEEEEEeCCCCCchHHHhcccccc-eEEEEecCCHHHHHHHHHHcCCCEEEEEEEeCCC
Q 000572 992 GHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELG-LVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSH 1070 (1414)
Q Consensus 992 ~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~~~~~~~LFsE~~G-~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~ 1070 (1414)
|||||||||+++|+|||++|++|++|+++.. .++...||+|++| +|++|++++.+++++.+++.|+++++||+|++ +
T Consensus 618 ~~DvSdGGL~~aL~ema~as~~G~~I~l~~~-~~~~~~Lf~e~~g~~v~~V~~~~~~~v~~~l~~~gi~~~~IG~v~~-~ 695 (724)
T PRK01213 618 AHDVSEGGLAVALAEMAIAGGLGAEVDLSDG-LRPDALLFSESQGRYVVSVPPENEEAFEALAEAAGVPATRIGVVGG-D 695 (724)
T ss_pred EEeCCcCcHHHHHHHHHhcCCceEEEEeCCC-CChHHHhhCCCCceEEEEEchhHHHHHHHHHHHCCCCeEEEEEEcC-C
Confidence 9999999999999999999999999999842 4556789999999 59999999999999999999999999999987 7
Q ss_pred cEEEEECCEEEEeccHHHHHHHhhhcc
Q 000572 1071 SVEIKVDGLTHLNEKTSLLRDMWEETS 1097 (1414)
Q Consensus 1071 ~l~i~~~g~~i~~~~~~~L~~~W~~~s 1097 (1414)
.++|..++. .++++|++.|+++.
T Consensus 696 ~l~i~~~~~----~~~~~l~~~w~~~~ 718 (724)
T PRK01213 696 ALKVKGNDT----ESLEELREAWEGAL 718 (724)
T ss_pred EEEEecCCc----ccHHHHHHHHHHHH
Confidence 777765433 38999999999874
|
|
| >TIGR01736 FGAM_synth_II phosphoribosylformylglycinamidine synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-113 Score=1101.36 Aligned_cols=705 Identities=26% Similarity=0.349 Sum_probs=597.3
Q ss_pred CChhhHHHHHHHHHhhcCCCCCHHHHHHHHhhhccccccceeeeEEEEcCcccchhHHHHHHHHhccCCCCceeeeccCc
Q 000572 285 FDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNS 364 (1414)
Q Consensus 285 l~~~el~~~~~~f~~~l~R~Pt~~El~~~~q~wSEHCrhk~F~~~~~~d~~~~~~~lf~~I~~~~~~~~~~~~~g~~Dda 364 (1414)
|+++||++|++ .|||+|||+||+||+|+|||||+||+++ +++ +++....+++++|+||||
T Consensus 1 l~~~e~~~i~~----~l~r~p~~~e~~~~~~~wsehc~~k~~~------------~~~----~~~~~~~~~v~~g~gDDa 60 (715)
T TIGR01736 1 LSDEEMELIRE----ILGREPNDTELAMFSAMWSEHCSYKSSK------------KLL----KQFPTKGPNVIQGPGEDA 60 (715)
T ss_pred CCHHHHHHHHH----HhCCCCCHHHHHHHHHHHhhhcCCcCcH------------HHH----hhCCCCCCcEEEeeCCce
Confidence 68899999974 6999999999999999999999999753 333 233334578999999999
Q ss_pred ceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeEEEeEEEEec
Q 000572 365 SAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVG 444 (1414)
Q Consensus 365 avi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g 444 (1414)
||++. ++++.+++++|+||||++++||++|+|++++++||++|| ||+|++++++|+++
T Consensus 61 avi~~--------------------~~~~~lv~~~e~h~~p~~~~P~~~a~~~v~~~vsDi~am--Ga~P~~~~~~l~~~ 118 (715)
T TIGR01736 61 GVVDI--------------------GDGYAVVFKMESHNHPSAIEPYNGAATGVGGILRDILSM--GARPIALLDSLRFG 118 (715)
T ss_pred EEEEe--------------------CCCeEEEEEeccCCCCCCcCCCCchhhcccceecccccC--CCeEeeEEEEeccC
Confidence 99973 246678899999999999999999999999999999999 99999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCCceEEEEEEEee
Q 000572 445 NLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQI 524 (1414)
Q Consensus 445 ~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~Plv~~~~vG~v 524 (1414)
++..+ .+.++++++++|+++|||+||+|++||||. +... ...+|++.++++|.+
T Consensus 119 ~~~~~------------------~~~~~l~~~~~Gi~~~~~~~Gv~ivGG~t~-~~~~-------~~~~~~v~~t~iG~~ 172 (715)
T TIGR01736 119 PLDDP------------------KNRYLFEGVVAGISDYGNRIGVPTVGGEVE-FDES-------YNGNPLVNVMCVGLV 172 (715)
T ss_pred CCCCc------------------chHHHHHHHHHHHHHhccccCCCccceEEE-EecC-------cCCCCeEEEEEEEEE
Confidence 64211 246689999999999999999999999994 4221 134688888999999
Q ss_pred eCccccc-CCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhccCCceE
Q 000572 525 DHNHISK-GEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIIS 603 (1414)
Q Consensus 525 ~~~~i~r-~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a 603 (1414)
+++++.+ +.++|||.|+++|+++|++|+||+++++....+...+...+.||+++|++++.+ ++.+.++.+.++|++
T Consensus 173 ~~~~~~~~~~a~~GD~Iv~~G~~~G~~g~gg~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~~~~l~~~~~v~a 249 (715)
T TIGR01736 173 RKDDIVTGKAKGPGNKLVLVGGKTGRDGIGGATFASEELSEEAEEEDRPAVQVGDPFTEKLL---IEATLEAVDTGLVKG 249 (715)
T ss_pred chHHcccCCCCCCCCEEEEeCCCCCcCCccHHHHHHHHhccccccccCcccccCCcHHHHHH---HHHHHHHhccCCEEE
Confidence 8877654 458999999999988999999999887765443222335678999999999876 567777778889999
Q ss_pred EEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEE
Q 000572 604 IHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGT 681 (1414)
Q Consensus 604 ~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~ 681 (1414)
|||+|+|||+++|.|||+ ++|++||+++||+++.+++|+|+|++|+|++|+|+|+|++.++|+++++++++++++||+
T Consensus 250 ~~Dis~gGL~~~l~ema~~s~~G~~I~l~~iP~~~~~~~~~e~~~se~qe~ll~~v~~~~~~~~~~~~~~~g~~~~vIG~ 329 (715)
T TIGR01736 250 IKDLGAAGLTSASSEMAAKGGLGAEIYLDKVPLREPGMTPYEIMLSESQERMLLVVAPEDVEEVLEIFEKYELPASVIGE 329 (715)
T ss_pred EEEcCCchHHHhHHHHhccCCcEEEEEcccCccCCCCCCHHHHHHhcccceEEEEEChhhHHHHHHHHHHcCCCEEEEEE
Confidence 999999999999999998 899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCeEEEEeCcccccccCCCCCCCCCeEEcchhhhhCCCCCceecccccCCCCCCCCCCCCCCHHHHHHHHHcCCCCC
Q 000572 682 ISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSLKRVLRLPSVC 761 (1414)
Q Consensus 682 vt~~~~l~l~~~~~~~~~~~~~~~~~~~~~dl~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~vL~~p~Va 761 (1414)
|++++++++.+ +++.++|+|+++|.+ +|+++++.+.++........+...++++++.++|+||||+
T Consensus 330 v~~~~~~~v~~-------------~g~~~~~~~~~~l~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 395 (715)
T TIGR01736 330 VTDEGRIRLYY-------------KGEVVADLPIELLAD-APEYERPSEPPKYPEEEKEPEPPADLEDAFLKVLSSPNIA 395 (715)
T ss_pred EecCCeEEEEE-------------CCceEEEeeHHHHcC-CCceecccccccccccccccCCcccHHHHHHHHhCCCccc
Confidence 99988888887 488999999999988 9999998765432111111222358999999999999999
Q ss_pred cchhhhhccccccCcccccccccCCCCCCcCcEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccC
Q 000572 762 SKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAK 841 (1414)
Q Consensus 762 SK~~l~~~~D~~V~g~tv~~p~vGp~~~pg~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~G 841 (1414)
||+||++||||+|+++|+++ |++||||+++.....+++++|+|.+|++...|||.+|++||++|+|||+|||
T Consensus 396 sK~~i~~~~d~~v~~~~~~~--------pgdDaaVi~~~~~~~~glv~t~D~~~~~~~~~P~~~g~~aV~~~vsDiaa~G 467 (715)
T TIGR01736 396 SKEWVYRQYDHEVQTRTVVK--------PGEDAAVLRIKETGKLGLALTADCNPRYVYLDPYAGAAGAVAEAYRNLAAVG 467 (715)
T ss_pred ChhhHHhhCCCccCCCeEec--------cCCceEEEEecCCCceEEEEEecCCCCchhcCHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999853 4789999998653345799999999999999999999999999999999999
Q ss_pred cccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCC
Q 000572 842 VTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDIT 921 (1414)
Q Consensus 842 a~Pl~~v~ls~n~~~p~~~~~e~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~ 921 (1414)
|+|++ +..++||+.|++ +.....+.++++||.++|++||+|++|||||+|+++. ...++||++++++|.+++.+
T Consensus 468 a~P~~-~~~~l~~g~p~~-~~~~~~l~~~~~gi~~~~~~~gv~ivGG~ts~~~~~~----~~~i~pt~~v~~~G~~~~~~ 541 (715)
T TIGR01736 468 AEPLA-AVDCLNFGNPER-PEVYWQFVEAVKGLGDACRALGTPVVGGNVSLYNETN----GVPIAPTPTIGMVGLVEDVE 541 (715)
T ss_pred Ceehh-heeeeccCCCCC-hhHHHHHHHHHHHHHHHHHHhCCCcccceeeeccccC----CCCCCCcceEEEEEeccChh
Confidence 99986 555677766643 2222346789999999999999999999999998642 23457899999999998756
Q ss_pred cccCCCccCCCCcEEEEEEcCCCccccchHHHHHHh-hhcCCCCCCCCChHHHHHHHHHHHHHHhccCceEEEeCCCCch
Q 000572 922 KTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVF-DQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGL 1000 (1414)
Q Consensus 922 ~~lt~~~k~~Gd~~li~v~lg~~~~~LGGS~la~~~-~~~~~~~p~v~d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL 1000 (1414)
+++++.++++|| .|+++ |.....++|+.+++.+ +......|++ +++.++++++.+++++++++|+||||+|||||
T Consensus 542 ~~i~~~~a~~Gd-~i~l~--g~~g~~~~G~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~i~~l~~~g~v~a~~DiSdGGL 617 (715)
T TIGR01736 542 KLLTSNFKKEGD-AIYLI--GETKDELGGSEYLRVIHGIVSGQVPAV-DLEEEKELADAVREAIRAGLVSAAHDVSRGGL 617 (715)
T ss_pred hccCcccCCCCC-EEEEE--eCCCCCccHHHHHHHhcCCcCCcCCCC-CHHHHHHHHHHHHHHHHcCCeEEEEeCCcChH
Confidence 789999999998 45454 6556778899877654 3444566777 78889999999999999999999999999999
Q ss_pred HHHHHHHHhcCCeEEEEEeCCCCC-chHHHhcccccc-eEEEEecCCHHHHHHHHHHcCCCEEEEEEEeCCCcEEEEECC
Q 000572 1001 LVCTLEMSFAGNYGITLDLNSEGN-SLFQTLFAEELG-LVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDG 1078 (1414)
Q Consensus 1001 ~~aL~EMa~as~~G~~Idl~~~~~-~~~~~LFsE~~G-~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i~~~g 1078 (1414)
+++|+|||++|++|++|++++++. ++...||+|++| +|++|++++. .+.+++.|+++++||+ ++++.++|+.++
T Consensus 618 ~~aL~ema~~s~~G~~I~l~~ip~~~~~~~lfses~g~~v~~v~~~~~---~~~l~~~gi~~~vIG~-~~~~~l~i~~~~ 693 (715)
T TIGR01736 618 AVALAEMAAASGIGAEVDIDEIASARPDELLFSESNGRAIVAVPEEKA---EEAVKSKGVPAKVIGK-TGGDRLTIKTGD 693 (715)
T ss_pred HHHHHHHHhCCCceEEEEcCCCcCcchHHHHhCCCCccEEEEECchHH---HHHHHHcCCCEEEEEE-ECCCeEEEEECC
Confidence 999999999999999999998763 667889999999 5999998876 4556688999999999 666778888888
Q ss_pred EEEEeccHHHHHHHhhhcc
Q 000572 1079 LTHLNEKTSLLRDMWEETS 1097 (1414)
Q Consensus 1079 ~~i~~~~~~~L~~~W~~~s 1097 (1414)
+ .++.++++|++.|+++.
T Consensus 694 ~-~~~~~~~~l~~~w~~~~ 711 (715)
T TIGR01736 694 D-TISVSVKELRDAWEEAL 711 (715)
T ss_pred E-EEEeeHHHHHHHHHHHH
Confidence 7 78999999999999764
|
Phosphoribosylformylglycinamidine synthase is a single, long polypeptide in most Proteobacteria and eukarotes. Three proteins are required in Bacillus subtilis and many other species. This is the longest of the three and is designated PurL, phosphoribosylformylglycinamidine synthase II, or FGAM synthase II. |
| >PRK14090 phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-98 Score=918.81 Aligned_cols=561 Identities=21% Similarity=0.274 Sum_probs=474.5
Q ss_pred HHHHhhcCCCCCHHHHHHHHhhhccccccceeeeEEEEcCcccchhHHHHHHHHhccCCCCceeeeccCcceeecCCccc
Q 000572 295 RLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQ 374 (1414)
Q Consensus 295 ~~f~~~l~R~Pt~~El~~~~q~wSEHCrhk~F~~~~~~d~~~~~~~lf~~I~~~~~~~~~~~~~g~~Ddaavi~~~~~~~ 374 (1414)
+..++.|||+||++||.+|+|+|||||+||+ +|+++++.+. .|++|||||++.
T Consensus 5 ~~~~~~l~r~p~~~el~~~~~~wsehc~y~~-------------------~k~~l~~~~~---~g~gdDAaVi~~----- 57 (601)
T PRK14090 5 NILEEKLGREPTFVELQAFSVMWSEHCGYSH-------------------TKKYIRRLPK---TGFEGNAGVVNL----- 57 (601)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHhhhhcCCHH-------------------HHHHHhhCCC---CCCCCCeEEEEe-----
Confidence 4556689999999999999999999999984 6777765542 367899999972
Q ss_pred ccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCC
Q 000572 375 LRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAP 454 (1414)
Q Consensus 375 ~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~ 454 (1414)
++++.++||+|+||||++++||+||+|++++++|||+|| ||+|+|++++|.|+
T Consensus 58 ---------------~~~~~l~~k~Eshn~ps~idPy~GAat~Vgg~irDIaam--GA~Pialld~L~~~---------- 110 (601)
T PRK14090 58 ---------------DDYYSIAFKIESHNHPSAIEPYNGAATGVGGIIRDVLAM--GARPTAIFDSLHMS---------- 110 (601)
T ss_pred ---------------CCCCEEEEEECccCCcccCCHHHHHHHHHHHHHhhHhhc--CCChheeEEcCChH----------
Confidence 356789999999999999999999999999999999999 99999999998642
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCCceEEEEEEEeeeCcccc-cCC
Q 000572 455 WEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHIS-KGE 533 (1414)
Q Consensus 455 w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~Plv~~~~vG~v~~~~i~-r~~ 533 (1414)
++++++++|+++|||++|+|+|||+|. +++.+ ..+|++.++++|.++++++. +..
T Consensus 111 ----------------~~l~~vv~GI~~~~n~~GVP~VGGdt~-~~~~y-------~~~plv~vt~vG~v~~~~iv~~~~ 166 (601)
T PRK14090 111 ----------------RIIDGIIEGIADYGNSIGVPTVGGELR-ISSLY-------AHNPLVNVLAAGVVRNDMLVDSKA 166 (601)
T ss_pred ----------------HHHHHHHHHHHHHHHHhCCCEeeEEEE-EeCCc-------cCCCceEEEEEEEEcCccccccCC
Confidence 367899999999999999999999995 44431 24688999999999887754 566
Q ss_pred CCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHH
Q 000572 534 PDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNC 613 (1414)
Q Consensus 534 a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~ 613 (1414)
+++||.|+++|+++|++|+||+++++...... .....+||.+||++++++ ++++++..+.+++++|||+|+|||+
T Consensus 167 a~~GD~Ivl~G~~tGrdGi~Gas~as~~l~~~--~~~~~~vq~gd~~~ek~l---~e~~l~~~~~glI~a~~DigaGGLa 241 (601)
T PRK14090 167 SRPGQVIVIFGGATGRDGIHGASFASEDLTGE--KATKLSIQVGDPFAEKML---IEAFLEMVEEGLVEGAQDLGAGGVL 241 (601)
T ss_pred CCCCCEEEEEcCCCCCCCcchHHHHHHHhcCC--cccccccccCCHHHHHHH---HHHHHhHHhcCCeEEeeCCCCCcHH
Confidence 89999999999999999999998777654321 123357899999999886 4455666678899999999999999
Q ss_pred HHHHHHhc--CCeEEEEeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCCeEEEE
Q 000572 614 NVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLV 691 (1414)
Q Consensus 614 ~aL~Ela~--~~Ga~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~l~ 691 (1414)
++|+|||. ++|++||+++||+++.+|+|+|+|+|||||||+++|+|++.++|+++|+++++++++||+||+++++++.
T Consensus 242 ~AL~EmA~~sg~G~~IdLdkVPl~~~~m~p~eil~SESqeRmlv~V~~e~~~~~~~i~~~~~l~a~vIG~Vt~~~~l~~~ 321 (601)
T PRK14090 242 SATSELVAKGGLGAIVHLDRVPLREPDMEPWEILISESQERMAVVTSPEKASRILEIAKKHLLFGDIVAEVIDDPIYRVM 321 (601)
T ss_pred HHHHHHHHHhCCeEEEEecccccCcccCCHHHHHhcCCCCeEEEEECHHHHHHHHHHHHhCCCCEEEEEEEeCCceEEEE
Confidence 99999998 8999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eCcccccccCCCCCCCCCeEEcchhhhhCCCCCcee-cccccCCCCCCCCCCCCCCHHHHHHHHHcCCCCCcchhhhhcc
Q 000572 692 DSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTF-EFHHADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKV 770 (1414)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~dl~~~~l~~~~p~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~vL~~p~VaSK~~l~~~~ 770 (1414)
+ +++.++|+|+++|.+ .|++.+ +.. +. ..+...+ .+|.+ +||+||++||
T Consensus 322 ~-------------~g~~v~dlp~~~L~~-~p~~~~~~~~--~~-----~~~~~~~--~~l~~-------~s~~~i~~qy 371 (601)
T PRK14090 322 Y-------------RDDLVMEVPVQLLAN-APEEEIVEYT--PG-----EIPEFKR--VEFEE-------VNAREVFEQY 371 (601)
T ss_pred E-------------CCeEEEEccHHHHhc-CCcccccccC--cc-----cccccch--HHHHH-------hhHHHHHHhc
Confidence 8 489999999999987 588876 332 11 1111111 23333 6899999999
Q ss_pred ccccCcccccccccCCCCCCcCcEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCccccccccc
Q 000572 771 DRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKA 850 (1414)
Q Consensus 771 D~~V~g~tv~~p~vGp~~~pg~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~l 850 (1414)
||+||++||++| +.|+||+++... .++++++|.+|+++.+|||+||++||+||+||++|+||+|++ +..
T Consensus 372 D~~V~~~tv~~P--------~~~a~v~~~~~~--~~~a~~~~~np~~~~~~p~~g~~~av~ea~rn~~~~Ga~p~~-i~~ 440 (601)
T PRK14090 372 DHMVGTDTVLPP--------GFGAAVMRIKRD--GGYSLVTHSRADLALQDTYWGTFIAVLESVRKTLSVGAEPLA-ITN 440 (601)
T ss_pred ccccCCCccccC--------CCCcEEEEEcCC--CeEEEEcCCCCceeccCHHHHHHHHHHHHHhhHhhhCCcHHH-cee
Confidence 999999999765 346999999753 389999999999999999999999999999999999999976 455
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccC
Q 000572 851 SGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKL 930 (1414)
Q Consensus 851 s~n~~~p~~~~~e~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~ 930 (1414)
.+||+.|++. ..+|.++++||+++|++|++|+|||||||||++ +.+++|||++++++|.+++ ++.+++ +
T Consensus 441 ~~nf~~p~~~---~~~~~~~~~~~~~a~~~~~~p~i~G~~S~~n~~----~~~~i~PT~~~~~vg~~~~-~~~~~~---~ 509 (601)
T PRK14090 441 CVNYGDPDVD---PVGLSAMMTALKDACEFSGVPVASGNASLYNTY----QGKPIPPTLVVGMLGKVNP-QKVAKP---K 509 (601)
T ss_pred chhcCCCCCC---HHHHHHHHHHHHHHHHHhCCCeecceeccccCC----CCccCCCCceEEEEEEecc-ccccCC---C
Confidence 6899988753 347889999999999999999999999999986 2367899999999999987 677776 3
Q ss_pred CCCcEEEEEEcCCCccccchHHHHHHhhhcCCCCCCCCChHHHHHHHHHHHHHHhcc-CceEEEeCCCCchHHHHHHHHh
Q 000572 931 GDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDE-LVSTGHDISDGGLLVCTLEMSF 1009 (1414)
Q Consensus 931 ~Gd~~li~v~lg~~~~~LGGS~la~~~~~~~~~~p~v~d~~~lk~~~~~v~~l~~~g-~v~A~hDiSdGGL~~aL~EMa~ 1009 (1414)
.| +|++| |. |.+ |.+.++++++.+.+++++| +++|+||+|+| + .+|.+
T Consensus 510 ~~--~i~li--g~---------------------~~~-~~~~~~~~~~~~~~~i~~~~~~~~~hd~s~g-~----~~~~~ 558 (601)
T PRK14090 510 PS--KVFAV--GW---------------------NDF-ELEREKELWREIRKLSEEGAFILSSSQLLTR-T----HVETF 558 (601)
T ss_pred CC--eEEEE--CC---------------------CCC-CHHHHHHHHHHHHHHHhCCCeEEEEEEcccC-c----hhhhh
Confidence 45 45565 31 344 7789999999999999999 99999999995 3 45555
Q ss_pred cCCeEEEEEeCCC
Q 000572 1010 AGNYGITLDLNSE 1022 (1414)
Q Consensus 1010 as~~G~~Idl~~~ 1022 (1414)
+|.|+.|.++.+
T Consensus 559 -~~~~~~~~~~~~ 570 (601)
T PRK14090 559 -REYGLKIKLKLL 570 (601)
T ss_pred -ccccccccchhh
Confidence 789998887653
|
|
| >PF13507 GATase_5: CobB/CobQ-like glutamine amidotransferase domain; PDB: 3D54_L 3UMM_A 3UJN_A 3UGJ_A 1T3T_A | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-68 Score=597.38 Aligned_cols=258 Identities=48% Similarity=0.889 Sum_probs=211.1
Q ss_pred CCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHH
Q 000572 1144 KPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~ 1223 (1414)
||||+||++||+||++|+++||+++||++++||++|+..++..|++||+|+|||||||||++++|++||+++++++.+++
T Consensus 1 kpkV~Vl~~pGtNce~e~~~A~~~aG~~~~~v~~~dl~~~~~~l~~~~~lvipGGFS~gD~l~sg~~~a~~~~~~~~~~~ 80 (259)
T PF13507_consen 1 KPKVAVLRFPGTNCERETAAAFENAGFEPEIVHINDLLSGESDLDDFDGLVIPGGFSYGDYLRSGAIAAARLLFNSPLMD 80 (259)
T ss_dssp --EEEEEE-TTEEEHHHHHHHHHCTT-EEEEEECCHHHTTS--GCC-SEEEE-EE-GGGGTTSTTHHHHHHHCCSCCCHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHcCCCceEEEEEecccccCchhhCcEEEECCccCccccchHHHHHHHHhhccHHHHH
Confidence 68999999999999999999999999999999999998888899999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEE-ccCCCccccCCCC
Q 000572 1224 QFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTI-EDSPAIMLKGMEG 1302 (1414)
Q Consensus 1224 ~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i-~~~~s~~l~g~~g 1302 (1414)
+|++|++++|+|+||||||||+|+++||||+++.. .....++|++|+|+||||||++++| ++++++|++++++
T Consensus 81 ~i~~f~~~~g~~vLGIcNGfQiL~~~Gllp~~~~~------~~~~~~~L~~N~s~~fe~rwv~~~v~~~s~~~~~~~~~~ 154 (259)
T PF13507_consen 81 AIREFLERPGGFVLGICNGFQILVELGLLPGGEIK------DSEQSPALTPNASGRFESRWVNLVVNENSPSIFLRGLEG 154 (259)
T ss_dssp HHHHHHHCTT-EEEEECHHHHHHCCCCCSTT------------TT--EEE--TTSS-EEEEEEEEE--SSTTCCCTTTTC
T ss_pred HHHHHHhcCCCeEEEEchHhHHHHHhCcCCCcccc------ccCCCcEEcCCCCCCeEEEEEEEEEecCCcceecCCCCE
Confidence 99999987799999999999999999999974432 2467889999999999999999988 4699999999976
Q ss_pred cEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccccc
Q 000572 1303 STLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLM 1382 (1414)
Q Consensus 1303 ~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~ 1382 (1414)
..+| ++||||||++++++.+++|.+++||++||+|++|++|++||+|||||.++||||||+|||||||||||||++++
T Consensus 155 ~~lP--iahgeG~~~~~~~~~l~~l~~~~qi~~~Y~~~~g~~a~~yP~NPNGS~~~IAGics~~GrvlglMpHPEr~~~~ 232 (259)
T PF13507_consen 155 IVLP--IAHGEGRFYARDEATLEELEENGQIAFRYVDEEGNPAQEYPRNPNGSVNNIAGICSPDGRVLGLMPHPERAFEP 232 (259)
T ss_dssp EEEE--EEESS-EEE-SSHHHHHHHCCTTEEEEEECSTTSSB--STTTSSS--GGGEEEEE-TTSSEEEESSBCCGTTCC
T ss_pred EEEE--EecCcceeecCCHHHHHHHHhcCeEEEEEecCCCCcccCCCCCCCCCccceeEEEcCCCCEEEEcCChHHhCch
Confidence 5555 89999999997888999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1383 WQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1383 ~q~~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
|||||||++. +..|||++||+||++||
T Consensus 233 ~~~~~~p~~~----~~~s~~~~~F~n~~~w~ 259 (259)
T PF13507_consen 233 WQWPHWPREK----WQESPWLRIFQNAVEWF 259 (259)
T ss_dssp CCSS-S--TT------B-TTHHHHHHHHH--
T ss_pred hhcCCCCccc----cCCChHHHHHHHHhhcC
Confidence 9999999743 12499999999999997
|
|
| >COG0047 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-63 Score=527.20 Aligned_cols=229 Identities=42% Similarity=0.688 Sum_probs=210.5
Q ss_pred CCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHH
Q 000572 1144 KPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~ 1223 (1414)
+||||||++||+||+.||++||+++|++++.|+++|+..+. +||+||+||||||||+|+ .+|++++ .++++
T Consensus 2 ~~kvaVi~fpGtN~d~d~~~A~~~aG~~~~~V~~~d~~~~~----~~d~vv~pGGFSyGDyLr--~Gaiaa~---~~v~~ 72 (231)
T COG0047 2 RPKVAVLRFPGTNCDYDMAAAFERAGFEAEDVWHSDLLLGR----DFDGVVLPGGFSYGDYLR--AGAIAAI---APVMD 72 (231)
T ss_pred CceEEEEEcCCcCchHHHHHHHHHcCCCceEEEeeecccCC----CccEEEEcCCCCcccccC--cchHHhh---HHHHH
Confidence 68999999999999999999999999999999998765332 799999999999999999 4566666 77999
Q ss_pred HHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCC-C
Q 000572 1224 QFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGME-G 1302 (1414)
Q Consensus 1224 ~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~-g 1302 (1414)
+|++|++ +|+|+||||||||+|.++|||| |+ |++|.|.||+|||+.++|.+++|+|+++++ |
T Consensus 73 ~v~~~a~-~g~~vLGICNGfQiL~e~gLlP---Ga-------------l~~N~s~~F~cr~v~l~V~~~~t~ft~~~~~g 135 (231)
T COG0047 73 EVREFAE-KGKPVLGICNGFQILSEAGLLP---GA-------------LTRNESLRFECRWVYLRVENNNTPFTSGYEGG 135 (231)
T ss_pred HHHHHHH-CCCeEEEEcchhHHHHHcCcCC---cc-------------eecCCCCceEEEEEEEEEecCCCHHHHhcCCC
Confidence 9999997 9999999999999999999999 54 999999999999999999999999999996 5
Q ss_pred cEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccccc
Q 000572 1303 STLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLM 1382 (1414)
Q Consensus 1303 ~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~ 1382 (1414)
+++++|++||||||+++ ++++++|.+++||++||+|++|+ +++| +|||||+++||||||++|||+||||||||.++
T Consensus 136 ~~i~ipVAHgEGr~~~~-~~~l~~l~~ngqvvfrY~d~~G~-~~~~-~NPNGS~~~IaGI~n~~G~V~gmMPHPERa~~- 211 (231)
T COG0047 136 EVIPIPVAHGEGRYYAD-DETLAELEENGQVVFRYVDNNGE-TEEY-ANPNGSVNGIAGITNEDGNVLGMMPHPERASE- 211 (231)
T ss_pred ceEEEEEeecceeEEcc-HHHHHHHhhCCeEEEEEecCCCc-eeee-eCCCCChhhceeEEcCCCCEEEecCCchhhhh-
Confidence 99999999999999985 55899999999999999999999 8889 99999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCChhHHHHHHHHHhhC
Q 000572 1383 WQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS 1414 (1414)
Q Consensus 1383 ~q~~~~p~~~~~~~~~~spw~~~F~na~~~~~ 1414 (1414)
+|.|. ..|++||+++++|+.
T Consensus 212 ---~~~g~---------~Dg~~lF~s~~~~~~ 231 (231)
T COG0047 212 ---SLLGG---------EDGLRLFRSARKYLG 231 (231)
T ss_pred ---cccCC---------chHHHHHHHHHHhhC
Confidence 44442 149999999999974
|
|
| >PRK01175 phosphoribosylformylglycinamidine synthase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-60 Score=533.52 Aligned_cols=256 Identities=32% Similarity=0.537 Sum_probs=229.7
Q ss_pred CCCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHH
Q 000572 1143 SKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~ 1222 (1414)
.+|||+||++||+||++++.+||+++|+++.+++++++......+++||+|||||||||+|.++++..|+..+. +.++
T Consensus 2 ~~~kvaVl~~pG~n~d~e~~~Al~~aG~~v~~v~~~~~~~~~~~l~~~DgLvipGGfs~gD~l~~g~~~~~~l~--~~l~ 79 (261)
T PRK01175 2 ESIRVAVLRMEGTNCEDETVKAFRRLGVEPEYVHINDLAAERKSVSDYDCLVIPGGFSAGDYIRAGAIFAARLK--AVLR 79 (261)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHCCCcEEEEeeccccccccchhhCCEEEECCCCCcccccccchhhHHHHH--HHHH
Confidence 46899999999999999999999999999999998876555567899999999999999999998887766543 3567
Q ss_pred HHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCC
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEG 1302 (1414)
Q Consensus 1223 ~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g 1302 (1414)
+.|++|++ +|+|+||||+|||+|+++|+||+..+. .....|+|++|+|+||+|||++++|.+++||||++++|
T Consensus 80 ~~Ik~f~~-~gkpVLGICnG~QlLa~~GlLpg~~~~------~~~~~~~L~~N~s~~f~~~~~~~~v~~~~s~~~~~~~~ 152 (261)
T PRK01175 80 KDIEEFID-EGYPIIGICNGFQVLVELGLLPGFDEI------AEKPEMALTVNESNRFECRPTYLKKENRKCIFTKLLKK 152 (261)
T ss_pred HHHHHHHH-CCCeEEEECHHHHHHHHCCCCCCCCcc------ccCCcceEeecCCCCeEEeeeEEEECCCCChhHhccCC
Confidence 89999996 899999999999999999999963221 12455699999999999999999998899999999999
Q ss_pred cEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccccc
Q 000572 1303 STLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLM 1382 (1414)
Q Consensus 1303 ~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~ 1382 (1414)
+++++|++||||||+|.+++.+++|.+++||++||+|++|.++ +||+|||||.++||||||+||||+||||||||++++
T Consensus 153 ~~~~~piah~eG~~~~~~~~~l~~l~~~~~i~~~Y~d~~g~~~-~~p~NPNGs~~~IAGi~~~~G~vlglMpHPEr~~~~ 231 (261)
T PRK01175 153 DVFQVPVAHAEGRVVFSEEEILERLIENDQIVFRYVDENGNYA-GYPWNPNGSIYNIAGITNEKGNVIGLMPHPERAFYG 231 (261)
T ss_pred CEEEEeeEcCCcceEeCCHHHHHHHHHCCcEEEEEeCCCCCCC-CCCCCCCCChhhcceeECCCCCEEEEcCCHHHhhch
Confidence 9999999999999997788899999999999999999999865 999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1383 WQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1383 ~q~~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
|||||||++. ..+.+++||+|+++|+
T Consensus 232 ~~~~~~~~~~-----~~~~g~~~f~~~~~~~ 257 (261)
T PRK01175 232 YQHPYWEKEE-----DYGDGKIFFDSLINYL 257 (261)
T ss_pred hhcccccccc-----CCCchHHHHHHHHHHH
Confidence 9999999743 2468999999999875
|
|
| >cd02203 PurL_repeat1 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-51 Score=482.42 Aligned_cols=310 Identities=38% Similarity=0.554 Sum_probs=262.7
Q ss_pred HHHHHHhhhccccccceeeeEEEEcCcccchhHHHHHHHHhccCCCCceeeeccCcceeecCCcccccccCCCCCccccc
Q 000572 309 ELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSE 388 (1414)
Q Consensus 309 El~~~~q~wSEHCrhk~F~~~~~~d~~~~~~~lf~~I~~~~~~~~~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~ 388 (1414)
||+||+|+||||||||+|+ ++|+||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~------------~~~~~~------------------------------------------- 25 (313)
T cd02203 1 ELGMFAQMWSEHCRHKSFK------------SLLKMI------------------------------------------- 25 (313)
T ss_pred ChhhhhhhhhcccCCcchH------------HHHHHh-------------------------------------------
Confidence 8999999999999999994 677776
Q ss_pred cCCceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCC
Q 000572 389 SSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLAS 468 (1414)
Q Consensus 389 ~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~ 468 (1414)
+++++|+|+||||+.++||++|++++++|+||++|| ||+|++++++++++++..|... |.++..
T Consensus 26 ----~~~~~~~e~~~~~~~~~p~~~g~~~v~~~vsDiaam--Ga~P~~~~~~l~~p~~~~~~~~----------~~~~~~ 89 (313)
T cd02203 26 ----WAVVFKVETHNHPSAIEPFGGAATGVGGIIRDILSM--GARPIALLDGLRFGDLDIPGYE----------PKGKLS 89 (313)
T ss_pred ----hEEEEEeccCCCCCCcCCcccHhhhhhhhhhccccc--CCEEEEEeeEEeecCCcccccc----------cccccC
Confidence 236699999999999999999999999999999999 9999999999999887654321 333345
Q ss_pred hHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCCceEEEEEEEeeeCcccc-cCCCCCCCEEEEEccCC
Q 000572 469 PLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHIS-KGEPDIGMLVVKIGGPA 547 (1414)
Q Consensus 469 ~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~Plv~~~~vG~v~~~~i~-r~~a~~GD~Ivv~G~~~ 547 (1414)
+.++++++++|++++|++||+|++||||..+ ++ ...+|++.++++|.++++++. |++++|||.|+++|.++
T Consensus 90 ~~~~l~~~~~Gi~~~~~~~gv~lvGGdt~~~-~~-------~~~~p~~~~~~~G~~~~~~~~~~~~a~~GD~I~l~G~~~ 161 (313)
T cd02203 90 PRRILDGVVAGISDYGNCIGIPTVGGEVRFD-PS-------YYGNPLVNVGCVGIVPKDHIVKSKAPGPGDLVVLVGGRT 161 (313)
T ss_pred HHHHHHHHHHHHHHHHHHhCCceeeeEEEEE-CC-------cCCCceEEEEEEEEEehhhcccCCCCCCCCEEEEecCCC
Confidence 7889999999999999999999999999643 32 135788888999999877654 57799999999999989
Q ss_pred CcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeE
Q 000572 548 YRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGA 625 (1414)
Q Consensus 548 g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga 625 (1414)
+++|++|+++++..............++++++++++.+.+++.. +.+.+.++||||+|+|||+.+|.|||. ++|+
T Consensus 162 ~~~gl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~v~a~~DiS~gGL~~~L~ema~as~~G~ 238 (313)
T cd02203 162 GRDGIGGATFSSKELSENSSELDRPAVQVGDPFMEKKLQEAILE---ARETGLIVGIQDLGAGGLSSAVSEMAAKGGLGA 238 (313)
T ss_pred CCCCccHHHHHHHHhcCccccccCCCCCccCHHHHHHHHHHHHH---HHhcCCEEEEEecCCchHHHHHHHHHhcCCceE
Confidence 99999999877655442112223466788888888776544433 335678999999999999999999998 8999
Q ss_pred EEEeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCCeEEEEeCcccccccCCCCC
Q 000572 626 EIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLP 705 (1414)
Q Consensus 626 ~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~l~~~~~~~~~~~~~~~ 705 (1414)
+|++++||+.+..++|++++++|+|++++++|+|++.++|+++++++++++++||+|++++++.+.+
T Consensus 239 ~I~~~~iP~~~~~~~~~~~~~se~~~~ll~tv~~~~~~~~~~~l~~~gi~~~~IG~vt~~~~~~l~~------------- 305 (313)
T cd02203 239 EIDLDKVPLREPGMSPWEIWISESQERMLLVVPPEDLEEFLAICKKEDLEAAVIGEVTDDGRLRLYY------------- 305 (313)
T ss_pred EEEecCCcccCCCCCHHHHHhcCccccEEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCeEEEEE-------------
Confidence 9999999999888899999999999999999999999999999999999999999999988899887
Q ss_pred CCCCeEEc
Q 000572 706 PPPPAVDL 713 (1414)
Q Consensus 706 ~~~~~~dl 713 (1414)
+++.++||
T Consensus 306 ~~~~~~~~ 313 (313)
T cd02203 306 KGEVVADL 313 (313)
T ss_pred CCeEEeeC
Confidence 46777775
|
FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM. |
| >cd01740 GATase1_FGAR_AT Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-53 Score=472.21 Aligned_cols=233 Identities=45% Similarity=0.731 Sum_probs=208.8
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|+||++||+||++++++||+++|+++++|+++++......+++||+||||||++|+|.+++++.|+.+.+ +.+.++
T Consensus 1 v~vl~~pG~n~~~~~~~al~~aG~~v~~v~~~~~~~~~~~l~~~d~liipGG~~~~d~l~~~~~~~~~~~----~~~~l~ 76 (238)
T cd01740 1 VAVLRFPGSNCDRDMAYAFELAGFEAEDVWHNDLLAGRKDLDDYDGVVLPGGFSYGDYLRAGAIAAASPL----LMEEVK 76 (238)
T ss_pred CEEEEcCCcCCHHHHHHHHHHcCCCEEEEeccCCccccCCHhhCCEEEECCCCCcccccccccccccChh----HHHHHH
Confidence 6899999999999999999999999999998775444556889999999999999999998887765543 677888
Q ss_pred HHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEee----EEEEEccCCCccccC-CC
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRF----SSVTIEDSPAIMLKG-ME 1301 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~----v~v~i~~~~s~~l~g-~~ 1301 (1414)
+|++ .|+|+||||+|||+|+++|+++ +. ++.|.+.+|+++| ++++|..++++|+++ +.
T Consensus 77 ~~~~-~g~pvlGIC~G~QlL~~~gll~---g~-------------~~~~~~~~~~~~~~~~~v~~~v~~~~si~t~~~~~ 139 (238)
T cd01740 77 EFAE-RGGLVLGICNGFQILVELGLLP---GA-------------LIRNKGLKFICRWQNRFVTLRVENNDSPFTKGYME 139 (238)
T ss_pred HHHh-CCCeEEEECcHHHHHHHcCCCc---cc-------------cccCCCCceeccccCceEEEEEcCCCCceecCCCC
Confidence 8885 8999999999999999999999 43 3578888888865 999998899999999 48
Q ss_pred CcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccc
Q 000572 1302 GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1302 g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~ 1381 (1414)
|+.+++|++||||||++ +++.+++|.+++||+ ||+|.+|+++++||+|||||+++||||||+|||||||||||||+++
T Consensus 140 g~~l~~~vaHgeG~~~~-~~~~~~~l~~~~~i~-~y~~~~~~~~~~yp~NPnGs~~~iAgi~~~~GrvlglMphPer~~~ 217 (238)
T cd01740 140 GEVLRIPVAHGEGRFYA-DDETLAELEENGQIA-QYVDDDGNVTERYPANPNGSLDGIAGICNEDGRVLGMMPHPERAVE 217 (238)
T ss_pred CCEEEEEeECCceeeEc-CHHHHHHHHHCCCEE-EEEcCCCCccccCCCCCCCChhcceEEEcCCCCEEEEcCChHHccc
Confidence 99999999999999987 577899999999999 9999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCChhHHHHHHHH
Q 000572 1382 MWQYPWYPKNWNVDKKGPSPWLKMFQNAR 1410 (1414)
Q Consensus 1382 ~~q~~~~p~~~~~~~~~~spw~~~F~na~ 1410 (1414)
+|||+-+. ..+||++||+|++
T Consensus 218 ~~q~~~~~--------~~~~~~~~F~~~~ 238 (238)
T cd01740 218 PWQWERLL--------GGSDGLKLFRNAV 238 (238)
T ss_pred cccccccc--------CCCccHHHHhhcC
Confidence 99993222 4679999999974
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase (FGAR-AT). FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, Pi, and glutamate in the fourth step of the purine biosynthetic pathway. FGAR-AT is a glutamine amidotransferase. Glutamine amidotransferase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. FGAR-AT belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site |
| >TIGR01737 FGAM_synth_I phosphoribosylformylglycinamidine synthase I | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=403.48 Aligned_cols=226 Identities=37% Similarity=0.592 Sum_probs=201.2
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~ 1224 (1414)
|||+||+++|+||++++.+||+++|+++++++..+ ..++++|+||||||++++|.++++. +..+..+++.
T Consensus 1 ~~v~Vl~~~G~n~~~~~~~al~~~G~~~~~i~~~~-----~~l~~~d~lilpGG~~~~d~~~~~~-----~~~~~~~~~~ 70 (227)
T TIGR01737 1 MKVAVIRFPGTNCDRDTVYALRLLGVDAEIVWYED-----GSLPDYDGVVLPGGFSYGDYLRAGA-----IAAASPIMQE 70 (227)
T ss_pred CeEEEEeCCCcCcHHHHHHHHHHCCCeEEEEecCC-----CCCCCCCEEEECCCCcccccccccc-----hhcchHHHHH
Confidence 58999999999999999999999999999987543 2378899999999999999876543 2234557788
Q ss_pred HHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCC-Cc
Q 000572 1225 FQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGME-GS 1303 (1414)
Q Consensus 1225 i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~-g~ 1303 (1414)
+++|.+ .++|++|||+|||+|+++|+++ |+ +.+|.+++|+|+|++++|.+++++|+++++ |+
T Consensus 71 l~~~~~-~g~pvlgIC~G~QlLa~~GlL~---G~-------------l~~n~~~~~~~~~~~~~v~~~~~~~~~~~~~g~ 133 (227)
T TIGR01737 71 VREFAE-KGVPVLGICNGFQILVEAGLLP---GA-------------LLPNDSLRFICRWVYLRVENADTIFTKNYKKGE 133 (227)
T ss_pred HHHHHH-cCCEEEEECHHHHHHHHcCCCC---Cc-------------eeecCCCceEEEeEEEEECCCCChhhccCCCCC
Confidence 999985 8999999999999999999998 43 779999999999999999888899999996 89
Q ss_pred EEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccccc
Q 000572 1304 TLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMW 1383 (1414)
Q Consensus 1304 ~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~ 1383 (1414)
++++|++|+||||++ +++.+++|.+++||++||+|++|+.+ ||+|||||.+.|+||||++|||+|+||||||+.++|
T Consensus 134 ~~~~pi~H~eG~y~~-~~~~l~~l~~~~~i~~~y~d~~g~~~--~~~npngs~~~i~~i~~~~~~~~g~~~HpE~~~~~~ 210 (227)
T TIGR01737 134 VIRIPIAHGEGRYYA-DDETLARLESNDQVVFRYCDEDGDVA--EEANPNGSVGNIAGIVNERGNVLGMMPHPERASEKL 210 (227)
T ss_pred EEEEEeEcCCcCeEc-CHHHHHHHHHCCcEEEEEECCCCCCC--CCCCCCCCHHHHcccCCCCCCEEEEecCchhhcccc
Confidence 999999999999988 57788999999999999999999866 799999999999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1384 QYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1384 q~~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
|++ ..+++||+|+++|+
T Consensus 211 ~~~-------------~~g~~~~~~~~~~~ 227 (227)
T TIGR01737 211 LGG-------------DDGLKLFESLVEWL 227 (227)
T ss_pred cCC-------------cccHHHHHHHHhhC
Confidence 763 15899999999884
|
In some species, phosphoribosylformylglycinamidine synthase is composed of a single polypeptide chain. This model describes the PurQ protein of Bacillus subtilis (where PurL, PurQ, and PurS are required for phosphoribosylformylglycinamidine synthase activity) and functionally equivalent proteins from other bacteria and archaea. |
| >PRK03619 phosphoribosylformylglycinamidine synthase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-42 Score=378.27 Aligned_cols=217 Identities=35% Similarity=0.508 Sum_probs=194.2
Q ss_pred CEEEEEecCCCcCHHHHHHHHH-HcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFY-AAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~-~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~ 1223 (1414)
|||+||++||+||++|+.+||+ .+|+++..++.+ ...+++||+||||||++++|.++++.. ..+..+.+
T Consensus 1 ~~v~Vl~~~G~n~~~d~~~a~~~~~G~~~~~v~~~-----~~~l~~~D~lvipGG~~~~d~l~~~~~-----~~~~~~~~ 70 (219)
T PRK03619 1 MKVAVIVFPGSNCDRDMARALRDLLGAEPEYVWHK-----ETDLDGVDAVVLPGGFSYGDYLRCGAI-----AAFSPIMK 70 (219)
T ss_pred CEEEEEecCCcChHHHHHHHHHhcCCCeEEEEecC-----cCCCCCCCEEEECCCCchhhhhccchh-----hhchHHHH
Confidence 5899999999999999999999 899999988754 246889999999999999998875432 23456788
Q ss_pred HHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCC-CC
Q 000572 1224 QFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGM-EG 1302 (1414)
Q Consensus 1224 ~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~-~g 1302 (1414)
.|++|++ .++|++|||+|+|+|+++|++| ++ +.+|.+++|+|+|++++|.+++|+|++++ +|
T Consensus 71 ~l~~~~~-~g~~ilgIC~G~qlLa~~GLL~---g~-------------l~~n~~~~~~~~~v~v~i~~~~~~~~~~~~~g 133 (219)
T PRK03619 71 AVKEFAE-KGKPVLGICNGFQILTEAGLLP---GA-------------LTRNASLKFICRDVHLRVENNDTPFTSGYEKG 133 (219)
T ss_pred HHHHHHH-CCCEEEEECHHHHHHHHcCCCC---Ce-------------EEEcCCCcEEEEEEEEEECCCCChhhcCCCCC
Confidence 8999985 8999999999999999999999 53 78999999999999999998899999999 79
Q ss_pred cEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccccc
Q 000572 1303 STLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLM 1382 (1414)
Q Consensus 1303 ~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~ 1382 (1414)
+.+++|++|+||||++ +++.+++|.++++|+++|++ +|||||...||||||++||++|+||||||..++
T Consensus 134 ~~~~~~~aH~~~r~~~-~~~~~~~l~~~~~~~~~~~~----------~npngs~~~ia~i~~~~~~~~g~~~HPE~~~~~ 202 (219)
T PRK03619 134 EVIRIPIAHGEGNYYA-DEETLKRLEGNGQVVFRYCD----------ENPNGSVNDIAGIVNEKGNVLGMMPHPERAVEP 202 (219)
T ss_pred CEEEEEEEcCcccEEE-CHHHHHHHHhCCcEEEEEcC----------CCCCCCHHHhcccCCCCCCEEEEeCCCCccccC
Confidence 9999999999999998 57788999999999999987 599999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCChhHHHHHHHHHh
Q 000572 1383 WQYPWYPKNWNVDKKGPSPWLKMFQNAREW 1412 (1414)
Q Consensus 1383 ~q~~~~p~~~~~~~~~~spw~~~F~na~~~ 1412 (1414)
++++- .+++||+|+++|
T Consensus 203 ~~~~~-------------~g~~lf~~~v~~ 219 (219)
T PRK03619 203 LLGST-------------DGLKLFESLLKS 219 (219)
T ss_pred ccCCC-------------cCHHHHHHHhhC
Confidence 87632 468999999874
|
|
| >cd02193 PurL Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=360.61 Aligned_cols=263 Identities=27% Similarity=0.390 Sum_probs=218.5
Q ss_pred EEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHH
Q 000572 394 DVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQIL 473 (1414)
Q Consensus 394 ~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~ 473 (1414)
.+++++|+|+||+.+|||.||+++|++++||++|||++|+|++++++|+|++. .| ...+++
T Consensus 2 ~~a~~~~~~~~~~~~~p~~g~~~av~~~~~diaa~G~~a~P~~~~~~l~~~~~-~p------------------~~~~~l 62 (272)
T cd02193 2 GEAMKIEEHNHPAAIDPAAGAATGVGGAIRDIAATGIDAKPIALSANWMASAG-HP------------------GEDAIL 62 (272)
T ss_pred ccEEeecCCCCccccChHHHHHHHHHHHHhhhhhcCCCccceEEeeecccCCC-CC------------------CHHHHH
Confidence 57899999999999999999999999999999999444999999999998631 11 134578
Q ss_pred HHHHHHHHHHHhHhCCeeeeeeeEEeccccC----CCCccccCCceEEEEEEEeeeCccccc-CCCCCCCEEEEEccCCC
Q 000572 474 IDASNGASDYGNKFGEPLIQGYTRTFGMRLP----SGQRREWLKPIMFSGGIGQIDHNHISK-GEPDIGMLVVKIGGPAY 548 (1414)
Q Consensus 474 ~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~----~g~~~~~~~Plv~~~~vG~v~~~~i~r-~~a~~GD~Ivv~G~~~g 548 (1414)
.++++|++++|+++|+|++||+|. +++++. +++.....+|++.++++|.+++.+..+ ..+++||.|+++|++.+
T Consensus 63 ~~~~~gi~~a~~~~g~pivgG~~s-~~~~~~~~~~~~~~~~~~~p~~~vt~~G~~~~~~~~~~~~~~~Gd~I~~~g~~~~ 141 (272)
T cd02193 63 YDAVKGVAELCNQLGLPIPVGKDR-MSMKTRWQEGNEQREMTHPPSLVISAFGRVRDDRHTLPQLSTEGNALLLIGGGKG 141 (272)
T ss_pred HHHHHHHHHHhHhhCCcccCCEec-cccceecccCCCceEEEeCCEEEEEEEEEecCcceecccCCCCCCEEEEECCCCC
Confidence 999999999999999999999995 444321 111123567889999999998875543 55899999999999888
Q ss_pred cccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEE
Q 000572 549 RIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAE 626 (1414)
Q Consensus 549 ~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~ 626 (1414)
++|++|+++++..+.. ..+....++..++..++++.+.+.. +...+++++|||+|.|||+.+|.|||. ++|++
T Consensus 142 ~~g~~Gs~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~i~a~hDvs~GGL~~aL~Ema~~s~~G~~ 216 (272)
T cd02193 142 HNGLGGTALASVALSY--RQLGDKSAQVRDPAQEKGFYEAMQA---LVAAGKLLAWHDRGAGGLLVALAELVFAGHCGVQ 216 (272)
T ss_pred CCccchHHHHhhhhhh--cccCCCCCCCCCHHHHHHHHHHHHH---HHHCCCEEEEeeCCcchHHHHHHHHHhcCCCEEE
Confidence 8999999977653211 1123344677888887777554444 346778999999999999999999998 89999
Q ss_pred EEeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEE
Q 000572 627 IDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGT 681 (1414)
Q Consensus 627 Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~ 681 (1414)
|++++||+.+.+++|+++|++|+|+|++++|+|++.++|+++++++++++++||+
T Consensus 217 i~l~~ip~~~~~~~p~~~~~ses~~~~l~~v~~~~~~~~~~~~~~~gi~~~~IG~ 271 (272)
T cd02193 217 VDLAALGDDEPDMEPLEIALFESQERGVIQVRAEDRDAVEEAQYGLADCVHVLGQ 271 (272)
T ss_pred EEeCCCcCCCCCCCHHHHHHhhhccCeEEEECHHHHHHHHHHHhccCCCeEEecc
Confidence 9999999999899999999999999999999999999999999999999999996
|
In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM. |
| >cd02193 PurL Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=342.30 Aligned_cols=253 Identities=32% Similarity=0.471 Sum_probs=209.5
Q ss_pred EeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccC--cccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhCC
Q 000572 806 GGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAK--VTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGI 883 (1414)
Q Consensus 806 gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~G--a~Pl~~v~ls~n~~~p~~~~~e~~~l~~~~~gl~eac~~lGv 883 (1414)
+++|++|++++++.+|||.+|++||++++|||+||| ++|+. + +.||++|...|.+.+++.++++|+.++|++||+
T Consensus 2 ~~a~~~~~~~~~~~~~p~~g~~~av~~~~~diaa~G~~a~P~~-~--~~~l~~~~~~p~~~~~l~~~~~gi~~a~~~~g~ 78 (272)
T cd02193 2 GEAMKIEEHNHPAAIDPAAGAATGVGGAIRDIAATGIDAKPIA-L--SANWMASAGHPGEDAILYDAVKGVAELCNQLGL 78 (272)
T ss_pred ccEEeecCCCCccccChHHHHHHHHHHHHhhhhhcCCCccceE-E--eeecccCCCCCCHHHHHHHHHHHHHHHhHhhCC
Confidence 689999999999999999999999999999999999 99965 3 356666754454567788999999999999999
Q ss_pred cccccccccccccccC--C--ceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCC--ccccchHHHHHH-
Q 000572 884 AIDGGKDSLSMAAYSG--G--EVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKG--KRRLGGSALAQV- 956 (1414)
Q Consensus 884 ~ivGGk~S~s~~~~~~--~--~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~--~~~LGGS~la~~- 956 (1414)
|++|||||+|+++.|+ + .+..++|++++|++|.+++.. .+++.++++|| .|+++ |.+ ...++||.+.+.
T Consensus 79 pivgG~~s~~~~~~~~~~~~~~~~~~~p~~~vt~~G~~~~~~-~~~~~~~~~Gd-~I~~~--g~~~~~~g~~Gs~~~~~~ 154 (272)
T cd02193 79 PIPVGKDRMSMKTRWQEGNEQREMTHPPSLVISAFGRVRDDR-HTLPQLSTEGN-ALLLI--GGGKGHNGLGGTALASVA 154 (272)
T ss_pred cccCCEeccccceecccCCCceEEEeCCEEEEEEEEEecCcc-eecccCCCCCC-EEEEE--CCCCCCCccchHHHHhhh
Confidence 9999999999875332 1 124568999999999998754 45588899997 45555 432 347889988764
Q ss_pred --hhhcCCCCCCCCChHHHHHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCC-----CchHHH
Q 000572 957 --FDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEG-----NSLFQT 1029 (1414)
Q Consensus 957 --~~~~~~~~p~v~d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~-----~~~~~~ 1029 (1414)
...++...+...+++.++++++.++.++++++++||||+|+|||+++|+|||++|++|++|+++.++ .+++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~a~hDvs~GGL~~aL~Ema~~s~~G~~i~l~~ip~~~~~~~p~~~ 234 (272)
T cd02193 155 LSYRQLGDKSAQVRDPAQEKGFYEAMQALVAAGKLLAWHDRGAGGLLVALAELVFAGHCGVQVDLAALGDDEPDMEPLEI 234 (272)
T ss_pred hhhcccCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeCCcchHHHHHHHHHhcCCCEEEEEeCCCcCCCCCCCHHHH
Confidence 2222322233337888999999999999999999999999999999999999999999999998764 467888
Q ss_pred hcccccce-EEEEecCCHHHHHHHHHHcCCCEEEEEE
Q 000572 1030 LFAEELGL-VLEVSKSNLDTVSKKLHDAGVSAEIIGQ 1065 (1414)
Q Consensus 1030 LFsE~~G~-vl~V~~~~~~~v~~~l~~~gi~~~~IG~ 1065 (1414)
+|+|+.|+ |++|++++.++|++.+++.|+++++||+
T Consensus 235 ~~ses~~~~l~~v~~~~~~~~~~~~~~~gi~~~~IG~ 271 (272)
T cd02193 235 ALFESQERGVIQVRAEDRDAVEEAQYGLADCVHVLGQ 271 (272)
T ss_pred HHhhhccCeEEEECHHHHHHHHHHHhccCCCeEEecc
Confidence 99998885 9999999999999999999999999996
|
In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM. |
| >cd02204 PurL_repeat2 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=335.22 Aligned_cols=262 Identities=38% Similarity=0.501 Sum_probs=208.4
Q ss_pred cEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHHHHHHH
Q 000572 793 DVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAAT 872 (1414)
Q Consensus 793 DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~~~~ 872 (1414)
||||++++.+++.++++|+|++|+++..|||.+|++||++|+|||++|||+|+ .+.++++|++|...+++..++.++++
T Consensus 1 Daav~~~~~~~~~~~~~t~d~~~~~~~~~p~~~g~~av~~~~sDiaa~Ga~P~-~~~~~l~~~~~~~~~~~~~~l~~~~~ 79 (264)
T cd02204 1 DAAVLRIPGETDKGLAMSTGENPRYSLLDPYAGAALAVAEAVRNLVAVGADPL-AITDCLNFGNPEKPEGEMGQLVEAVL 79 (264)
T ss_pred CcEEEEEeCCCCeEEEEEcCCCCceeeeCHHHHHHHHHHHHHHHHhhhCCchH-heeeceeccCCCCCcchHHHHHHHHH
Confidence 89999987422478999999999999999999999999999999999999998 47777888777542213345778999
Q ss_pred HHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCccccchHH
Q 000572 873 ALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSA 952 (1414)
Q Consensus 873 gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~LGGS~ 952 (1414)
||.++|+++|++++|||||+|+++. ....+|++++|++|.+++.+..+++.++++|| .|+++ +......+++.
T Consensus 80 g~~~~~~~~gv~ivGG~t~~~~~~~----~~~~~~~~~~t~~G~~~~~~~~~~~~~a~~Gd-~i~~~--g~~g~~~~~~~ 152 (264)
T cd02204 80 GLGDACRALGTPVIGGKDSLYNETE----GVAIPPTLVIGAVGVVDDVRKIVTLDFKKEGD-LLYLI--GETKDELGGSE 152 (264)
T ss_pred HHHHHHHHhCCCcccceeCCccCCC----CcccCCcCeEEEEEEccChhhccCcccCCCCC-EEEEE--CCCCCCCCCcH
Confidence 9999999999999999999998642 13357899999999998765555558899997 45444 43223333443
Q ss_pred HHH-HhhhcCCCCCCCCChHHHHHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCCCchHHHhc
Q 000572 953 LAQ-VFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLF 1031 (1414)
Q Consensus 953 la~-~~~~~~~~~p~v~d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~~~~~~~LF 1031 (1414)
+.. .++......+.. +++.+++++..++.+.+.+.|+||||+|||||+++|+|||++|++|++|+++.++..+ ..||
T Consensus 153 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~i~a~~DiSdGGL~~~l~ema~~s~~G~~i~~~~i~~~~-~~l~ 230 (264)
T cd02204 153 YALAYHGLGGGAPPLV-DLEREKALFDAVQELIKEGLVLSAHDVSDGGLAVALAEMAFAGGLGAEVDLSKDDAED-ELLF 230 (264)
T ss_pred HHHHhcCCCCCCCCCC-CHHHHHHHHHHHHHHHhCCCEEEEeeccccHHHHHHHHHHhcCCceEEEEcCCCCccc-ceee
Confidence 333 223222223333 6678899999999999999999999999999999999999999999999999875443 5689
Q ss_pred ccccce-EEEEecCCHHHHHHHHHHcCCCEEEEEEE
Q 000572 1032 AEELGL-VLEVSKSNLDTVSKKLHDAGVSAEIIGQV 1066 (1414)
Q Consensus 1032 sE~~G~-vl~V~~~~~~~v~~~l~~~gi~~~~IG~v 1066 (1414)
+|++|. |++++++..+.+. ++..++++++||+|
T Consensus 231 ~e~~g~ll~~~~~~~~~~~~--~~~~~i~~~~IG~v 264 (264)
T cd02204 231 SESLGRVLVEVKPENEEVFE--AEEAGVPATVIGTV 264 (264)
T ss_pred cCCCCeEEEEEChhHHHHHH--HHhCCCCeEEeecC
Confidence 999995 7888888877776 88889999999985
|
FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM. |
| >PRK14090 phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=347.23 Aligned_cols=281 Identities=13% Similarity=0.135 Sum_probs=231.6
Q ss_pred CcCcEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHHHH
Q 000572 790 TLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYD 869 (1414)
Q Consensus 790 pg~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~ 869 (1414)
+++||||+++.+ ..+++++++.+++++.+|||.+|+.+|++++|||++|||+|++ +..++++ + ..+.+
T Consensus 48 ~gdDAaVi~~~~--~~~l~~k~Eshn~ps~idPy~GAat~Vgg~irDIaamGA~Pia-lld~L~~--~-------~~l~~ 115 (601)
T PRK14090 48 FEGNAGVVNLDD--YYSIAFKIESHNHPSAIEPYNGAATGVGGIIRDVLAMGARPTA-IFDSLHM--S-------RIIDG 115 (601)
T ss_pred CCCCeEEEEeCC--CCEEEEEECccCCcccCCHHHHHHHHHHHHHhhHhhcCCChhe-eEEcCCh--H-------HHHHH
Confidence 379999999875 3689999999999999999999999999999999999999986 4444543 2 35667
Q ss_pred HHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCc--cc
Q 000572 870 AATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGK--RR 947 (1414)
Q Consensus 870 ~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~--~~ 947 (1414)
+++|+.++|+++|+|++|||+++++.+ ..+|++.++++|.+++ .+++++..+++|| .|+++ |..+ ..
T Consensus 116 vv~GI~~~~n~~GVP~VGGdt~~~~~y-------~~~plv~vt~vG~v~~-~~iv~~~~a~~GD-~Ivl~--G~~tGrdG 184 (601)
T PRK14090 116 IIEGIADYGNSIGVPTVGGELRISSLY-------AHNPLVNVLAAGVVRN-DMLVDSKASRPGQ-VIVIF--GGATGRDG 184 (601)
T ss_pred HHHHHHHHHHHhCCCEeeEEEEEeCCc-------cCCCceEEEEEEEEcC-ccccccCCCCCCC-EEEEE--cCCCCCCC
Confidence 999999999999999999999998653 2356889999999986 5778888899997 44444 5322 34
Q ss_pred cchHHHH-HHh-hhcCCCC-CCCCChHHHHHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCC-
Q 000572 948 LGGSALA-QVF-DQVGNES-PDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEG- 1023 (1414)
Q Consensus 948 LGGS~la-~~~-~~~~~~~-p~v~d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~- 1023 (1414)
++|+.++ ..+ +.....+ .++.|+...+.+.+++.++++.+++.+|||+|.|||+++|+|||.+|++|++|++++++
T Consensus 185 i~Gas~as~~l~~~~~~~~~vq~gd~~~ek~l~e~~l~~~~~glI~a~~DigaGGLa~AL~EmA~~sg~G~~IdLdkVPl 264 (601)
T PRK14090 185 IHGASFASEDLTGEKATKLSIQVGDPFAEKMLIEAFLEMVEEGLVEGAQDLGAGGVLSATSELVAKGGLGAIVHLDRVPL 264 (601)
T ss_pred cchHHHHHHHhcCCcccccccccCCHHHHHHHHHHHHhHHhcCCeEEeeCCCCCcHHHHHHHHHHHhCCeEEEEeccccc
Confidence 5454443 333 2211111 12236667788888888888899999999999999999999999999999999999864
Q ss_pred ----CchHHHhcccccce-EEEEecCCHHHHHHHHHHcCCCEEEEEEEeCCCcEEEEECCEEEEeccHHHHHHHh
Q 000572 1024 ----NSLFQTLFAEELGL-VLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLRDMW 1093 (1414)
Q Consensus 1024 ----~~~~~~LFsE~~G~-vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i~~~g~~i~~~~~~~L~~~W 1093 (1414)
.+|.+.||||++|+ +++|++++.++|++++++.++++++||+|++++.+++.++|+.+++++++.|.+.+
T Consensus 265 ~~~~m~p~eil~SESqeRmlv~V~~e~~~~~~~i~~~~~l~a~vIG~Vt~~~~l~~~~~g~~v~dlp~~~L~~~p 339 (601)
T PRK14090 265 REPDMEPWEILISESQERMAVVTSPEKASRILEIAKKHLLFGDIVAEVIDDPIYRVMYRDDLVMEVPVQLLANAP 339 (601)
T ss_pred CcccCCHHHHHhcCCCCeEEEEECHHHHHHHHHHHHhCCCCEEEEEEEeCCceEEEEECCeEEEEccHHHHhcCC
Confidence 46788899999997 88999999999999999999999999999999889999999999999999998753
|
|
| >TIGR01736 FGAM_synth_II phosphoribosylformylglycinamidine synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=368.67 Aligned_cols=324 Identities=19% Similarity=0.218 Sum_probs=250.2
Q ss_pred CCCHHHHHHHHhhhccccccceeeeEEEEcCcccchhHHHHHHHHhccCCCCceeeeccCcceeecCCcccccccCCCCC
Q 000572 304 NPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSR 383 (1414)
Q Consensus 304 ~Pt~~El~~~~q~wSEHCrhk~F~~~~~~d~~~~~~~lf~~I~~~~~~~~~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~ 383 (1414)
.|.+.|..++...||+||..|-| +++++=..-..+++++.+|||||++...
T Consensus 377 ~~~~~~~~~~~~l~~~~v~sK~~-----------------i~~~~d~~v~~~~~~~pgdDaaVi~~~~------------ 427 (715)
T TIGR01736 377 PPADLEDAFLKVLSSPNIASKEW-----------------VYRQYDHEVQTRTVVKPGEDAAVLRIKE------------ 427 (715)
T ss_pred CcccHHHHHHHHhCCCcccChhh-----------------HHhhCCCccCCCeEeccCCceEEEEecC------------
Confidence 35688999999999999999943 1232211123578899999999997321
Q ss_pred ccccccCCceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCC
Q 000572 384 CQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYP 463 (1414)
Q Consensus 384 ~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~ 463 (1414)
+....++++++.|+++..++||.+|+++|++++|||+|| ||+|++++++|+||+|..|+
T Consensus 428 ------~~~~glv~t~D~~~~~~~~~P~~~g~~aV~~~vsDiaa~--Ga~P~~~~~~l~~g~p~~~~------------- 486 (715)
T TIGR01736 428 ------TGKLGLALTADCNPRYVYLDPYAGAAGAVAEAYRNLAAV--GAEPLAAVDCLNFGNPERPE------------- 486 (715)
T ss_pred ------CCceEEEEEecCCCCchhcCHHHHHHHHHHHHHHHHhhc--CCeehhheeeeccCCCCChh-------------
Confidence 012237889999999999999999999999999999999 99999999999998753221
Q ss_pred CCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCCceEEEEEEEeeeC-ccc-ccCCCCCCCEEE
Q 000572 464 SNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDH-NHI-SKGEPDIGMLVV 541 (1414)
Q Consensus 464 ~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~Plv~~~~vG~v~~-~~i-~r~~a~~GD~Iv 541 (1414)
..+.+.++++|+.++|++||+|+|||||. +++++. .....|++.++++|.+++ +++ .+..+++||.|+
T Consensus 487 -----~~~~l~~~~~gi~~~~~~~gv~ivGG~ts-~~~~~~----~~~i~pt~~v~~~G~~~~~~~~i~~~~a~~Gd~i~ 556 (715)
T TIGR01736 487 -----VYWQFVEAVKGLGDACRALGTPVVGGNVS-LYNETN----GVPIAPTPTIGMVGLVEDVEKLLTSNFKKEGDAIY 556 (715)
T ss_pred -----HHHHHHHHHHHHHHHHHHhCCCcccceee-eccccC----CCCCCCcceEEEEEeccChhhccCcccCCCCCEEE
Confidence 24568999999999999999999999994 555421 124567788899999876 554 456689999999
Q ss_pred EEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc
Q 000572 542 KIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY 621 (1414)
Q Consensus 542 v~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~ 621 (1414)
++|.. + .+++|+.+++...+. .....+..++..++++.+++ .++.+.+.++||||+|.|||+.+|.|||.
T Consensus 557 l~g~~-g-~~~~G~~~~~~~~~~-----~~~~~p~~~~~~~~~~~~~i---~~l~~~g~v~a~~DiSdGGL~~aL~ema~ 626 (715)
T TIGR01736 557 LIGET-K-DELGGSEYLRVIHGI-----VSGQVPAVDLEEEKELADAV---REAIRAGLVSAAHDVSRGGLAVALAEMAA 626 (715)
T ss_pred EEeCC-C-CCccHHHHHHHhcCC-----cCCcCCCCCHHHHHHHHHHH---HHHHHcCCeEEEEeCCcChHHHHHHHHHh
Confidence 99863 3 456677655432211 11223445677666654433 44556788999999999999999999998
Q ss_pred --CCeEEEEeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCCeEEEEeCcccccc
Q 000572 622 --PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKC 699 (1414)
Q Consensus 622 --~~Ga~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~l~~~~~~~~~ 699 (1414)
++|++|++++||+ +++.+++++|+|+||+++|+|++. .++++++++++++||+ |+++++++.+
T Consensus 627 ~s~~G~~I~l~~ip~----~~~~~~lfses~g~~v~~v~~~~~---~~~l~~~gi~~~vIG~-~~~~~l~i~~------- 691 (715)
T TIGR01736 627 ASGIGAEVDIDEIAS----ARPDELLFSESNGRAIVAVPEEKA---EEAVKSKGVPAKVIGK-TGGDRLTIKT------- 691 (715)
T ss_pred CCCceEEEEcCCCcC----cchHHHHhCCCCccEEEEECchHH---HHHHHHcCCCEEEEEE-ECCCeEEEEE-------
Confidence 8999999999997 357889999999999999999986 4566689999999999 7778888876
Q ss_pred cCCCCCCCCCeEEcchhhhh
Q 000572 700 QSSGLPPPPPAVDLELERVL 719 (1414)
Q Consensus 700 ~~~~~~~~~~~~dl~~~~l~ 719 (1414)
+++ .++++.+.|.
T Consensus 692 ------~~~-~~~~~~~~l~ 704 (715)
T TIGR01736 692 ------GDD-TISVSVKELR 704 (715)
T ss_pred ------CCE-EEEeeHHHHH
Confidence 344 6888888775
|
Phosphoribosylformylglycinamidine synthase is a single, long polypeptide in most Proteobacteria and eukarotes. Three proteins are required in Bacillus subtilis and many other species. This is the longest of the three and is designated PurL, phosphoribosylformylglycinamidine synthase II, or FGAM synthase II. |
| >TIGR03267 methan_mark_2 putative methanogenesis marker protein 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-33 Score=324.21 Aligned_cols=295 Identities=17% Similarity=0.164 Sum_probs=223.7
Q ss_pred HHHHHHHHHcCCCCCcc------hhhhhccccccCcccccccccCCCCCCcCcEEEEEecCCCceEeEEEEccC-CCCCC
Q 000572 747 VMDSLKRVLRLPSVCSK------RFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQ-PIKGL 819 (1414)
Q Consensus 747 l~~~l~~vL~~p~VaSK------~~l~~~~D~~V~g~tv~~p~vGp~~~pg~DaAVi~~~~~~~~gla~s~g~~-p~~~~ 819 (1414)
+.+...++-+...+|.| .-|++|||++++..+++ | +++||||+++.. ...+++|+|.. +.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g----~GdDaavi~~~~--~~~lvistD~~~~~~~~ 71 (323)
T TIGR03267 2 LRELARELRSFEGVTRKHPIKDVVEILEPLDVTYEGNVIV----D----FGDDAAAIKIGG--DDILLLAADGIWGKLLD 71 (323)
T ss_pred HHHHHHHHHhCccchhhcCHHHHHHHhccccccCCCCeee----c----cCCceEEEEcCC--CCEEEEEecCcCCcccc
Confidence 45566666777777777 45789999999999973 3 579999998864 35789999976 34566
Q ss_pred CCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhCCcccccccccccccccC
Q 000572 820 LNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSG 899 (1414)
Q Consensus 820 ~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~ 899 (1414)
.|||.+|++||++|+|||+||||+|+. +..++++ | +.+++.++++|+.++|+++|++++||||+....
T Consensus 72 ~~p~~~G~~av~~nlsDiaamGa~P~~-~~~~L~~--~-----~~~~l~~~~~Gi~~a~~~~gi~ivGGdT~~~~~---- 139 (323)
T TIGR03267 72 ADPWWAGYCAVLVNVNDIAAMGGKPVG-MVNVLSI--N-----DVDVCREVLEGMREGAWKFGVPVVGGHTHPDTP---- 139 (323)
T ss_pred cChhHhhHHhhhhhhhhHHhcCCEehh-HhhhhcC--C-----CHHHHHHHHHHHHHHHHHcCCCEEccccCCCCC----
Confidence 899999999999999999999999976 4555554 3 245688899999999999999999999864210
Q ss_pred CceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCccccchHHHHHHhhhcCCCCCCCCChHHHHHHHHH
Q 000572 900 GEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFET 979 (1414)
Q Consensus 900 ~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~LGGS~la~~~~~~~~~~p~v~d~~~lk~~~~~ 979 (1414)
.+++.+|++|.+++ .+.+++..+++|| .|++ .+.++++..+... +....+...+++.++..++.
T Consensus 140 ------~~~i~vt~iG~~~~-~~~~~r~~a~~GD--~I~v-----tg~l~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 203 (323)
T TIGR03267 140 ------YNALDVAIVGIAKE-DCIIRSDTAKPGD--LIIF-----AIDLDGRPYPSFP--LNWDTTTMKSPDYLRAQMDA 203 (323)
T ss_pred ------cceeeEEEEEEEcC-cceeeCCCCCCCC--EEEE-----EEcCCCccccccc--cCccchhccCHHHHHHHHHH
Confidence 13677899999875 5678999999997 4555 1235444322110 00011112245567777777
Q ss_pred HHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCCCc----hHHHhcccc-cceEEEEecCCHHHHHHHHH
Q 000572 980 VQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNS----LFQTLFAEE-LGLVLEVSKSNLDTVSKKLH 1054 (1414)
Q Consensus 980 v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~~~----~~~~LFsE~-~G~vl~V~~~~~~~v~~~l~ 1054 (1414)
+.++...+.++||||+|||||+++|+|||.+|++|++|+++.+|.. ...+++.+. .++|++|++++.+++++.++
T Consensus 204 ~~~~~~~~~v~a~~DiSdGGL~~~L~ema~~s~~G~~I~~~~iP~~~~~~~~~~l~~~~g~~ll~tv~~e~~~~~~~~~~ 283 (323)
T TIGR03267 204 VVEIAERKLVKAGKDISNPGLIGTLGMLLEASRVGAEVDLESIPKPEDVDMVTWLKMYPGSGFVLTADPENVREIVRVLE 283 (323)
T ss_pred HHHHHHhCCceEEEcCCCCcHHHHHHHHHhhcCCcEEEEcCcccCCCCCCHHHHHHhCCCCCEEEEECchhHHHHHHHHH
Confidence 7888888899999999999999999999999999999999987522 123333222 24799999999999999999
Q ss_pred HcCCCEEEEEEEeCCCcEEEEECCE
Q 000572 1055 DAGVSAEIIGQVNSSHSVEIKVDGL 1079 (1414)
Q Consensus 1055 ~~gi~~~~IG~v~~~~~l~i~~~g~ 1079 (1414)
+.|+++++||+|++++.+.+..++.
T Consensus 284 ~~g~~~~~IG~v~~~~~~~l~~~~~ 308 (323)
T TIGR03267 284 DAGLTASVIGEVIEDGKLYVSDGDE 308 (323)
T ss_pred HcCCcEEEEEEEecCceEEEEECCc
Confidence 9999999999999887777766443
|
A single member of this protein family is found in each of the first ten complete genome sequences of archaeal methanogens, and nowhere else. Sequence similarity to various bacterial proteins is reflected in Pfam models pfam00586 and pfam02769, AIR synthase related protein N-terminal and C-terminal domains, respectively. The functions of proteins in this family are unknown, but their role is likely one essential to methanogenesis. |
| >COG0611 ThiL Thiamine monophosphate kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=318.35 Aligned_cols=280 Identities=16% Similarity=0.176 Sum_probs=215.8
Q ss_pred chhHHHHHHHHhccC-CCCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhh
Q 000572 338 VRTLMQIVKSTLQAN-PNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAET 416 (1414)
Q Consensus 338 ~~~lf~~I~~~~~~~-~~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t 416 (1414)
.++||++|+++++.. ...+..++|||||+++.+++.+++.++ | +.||+.|||..+.|++.|++
T Consensus 2 ~m~Ef~lI~~~~~~~~~~~~~~~~GDDaA~v~~~~~~~lvvtt-----------D-----~lv~~~hF~~~~~p~d~G~K 65 (317)
T COG0611 2 SMGEFELIKRYFKRRQREDVVLGIGDDAALVDAPEGQRLVVTT-----------D-----MLVEGTHFPPDMTPEDLGWK 65 (317)
T ss_pred CCcHHHHHHHHHhhcCcccccccCCCceEEEecCCCceEEEEe-----------c-----ccccccccCCCCCHHHHHHH
Confidence 578999999999863 356889999999999988776666643 3 78998999999999999999
Q ss_pred cccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeee
Q 000572 417 GAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYT 496 (1414)
Q Consensus 417 ~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t 496 (1414)
+++.|+||++|| ||+|+|++.++++ |+. .+.+.++++++|+.+.++.||+++|||||
T Consensus 66 a~a~NlSDlAAM--Ga~P~~~~lsl~l-----P~~----------------~d~~~~~~~~~Gi~e~~~~y~~~lIGGDt 122 (317)
T COG0611 66 ALAVNLSDLAAM--GARPKAFLLSLGL-----PPD----------------LDEEWLEALADGIFEAAKKYGVKLIGGDT 122 (317)
T ss_pred HHHHHHHHHHHc--CCCchhheeeeeC-----CCC----------------CCHHHHHHHHHHHHHHHHHcCCeEecccc
Confidence 999999999999 9999999999974 532 24567899999999999999999999999
Q ss_pred EEeccccCCCCccccCCceEE-EEEEEeeeCcc-cccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccc---c
Q 000572 497 RTFGMRLPSGQRREWLKPIMF-SGGIGQIDHNH-ISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLD---F 571 (1414)
Q Consensus 497 ~s~~~~~~~g~~~~~~~Plv~-~~~vG~v~~~~-i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~---~ 571 (1414)
. .. |+.+ .+++|.+++.. +.|++|+|||.|+|+|. +|-..+++..+ +.....+.. .
T Consensus 123 ~-------------~~-~l~is~t~iG~~~~~~~l~R~gAkpGD~v~vtG~----lG~saagl~ll-~~~~~~~~~~~l~ 183 (317)
T COG0611 123 N-------------RG-PLSISVTAIGVLPKGRALLRSGAKPGDLVAVTGT----LGRSAAGLELL-LNVLGPEDEEELI 183 (317)
T ss_pred C-------------CC-ceEEEEEEEEecCCCchhhccCCCCCCEEEEcCC----CchhHHHHHHH-hcccCcchhHHHH
Confidence 4 22 6664 49999999987 78999999999999884 55554444333 221000000 0
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCCC-------ccHH
Q 000572 572 NAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHT-------LSVL 642 (1414)
Q Consensus 572 ~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~~-------l~p~ 642 (1414)
..++++.|..+ ....+.. .++++.|+| +||+.+|.||+. ++|++|+.++||+.+.. .+++
T Consensus 184 ~r~~~P~Prv~--------~g~~l~~--~a~aa~DiS-DGL~~dL~~i~~aS~vg~~I~~~~lp~~~~~~~~~~~~~~~~ 252 (317)
T COG0611 184 ERHLRPTPRVE--------LGLALAK--LASAAMDIS-DGLAADLGHIARASGVGIVIDEDLLPLSDAVLEALDELGDPL 252 (317)
T ss_pred HHhcCCCCChh--------HHHHHHH--HHHHheecc-hhHHHHHHHHHHHcCCeEEEEeccCCCcHHHHHHHhccCCHH
Confidence 11222333221 2222222 577999999 999999999999 99999999999966541 2578
Q ss_pred HHhcccccc-eeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCCeE
Q 000572 643 EIWGAEYQE-QDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRV 688 (1414)
Q Consensus 643 ei~~sEsqe-r~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l 688 (1414)
++.++...+ .+|+|+++++.+.++.++++.+ +++||+|+++.+.
T Consensus 253 ~~aL~gGEDyELvft~p~~~~~~~~~~~~~~~--~~~IG~v~~~~g~ 297 (317)
T COG0611 253 EWALSGGEDYELVFTVPEENREALLDALRSLG--VTIIGRVTEGEGV 297 (317)
T ss_pred HHHhccCCceEEEEEeCchhHHHHHHHHHhcC--ceEEEEEeecCCe
Confidence 888773322 4899999999999999999999 9999999954443
|
|
| >TIGR03267 methan_mark_2 putative methanogenesis marker protein 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=323.05 Aligned_cols=305 Identities=16% Similarity=0.174 Sum_probs=220.4
Q ss_pred ccccccceeeeEEEEcCcccchhHHHHHHHHhccCCCCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEE
Q 000572 318 SEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLF 397 (1414)
Q Consensus 318 SEHCrhk~F~~~~~~d~~~~~~~lf~~I~~~~~~~~~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 397 (1414)
||-|-||+ -+..+-++.+++-.....++++|+||||||++..+ +..+++
T Consensus 12 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~g~GdDaavi~~~~--------------------~~~lvi 60 (323)
T TIGR03267 12 FEGVTRKH-----------PIKDVVEILEPLDVTYEGNVIVDFGDDAAAIKIGG--------------------DDILLL 60 (323)
T ss_pred Cccchhhc-----------CHHHHHHHhccccccCCCCeeeccCCceEEEEcCC--------------------CCEEEE
Confidence 78899996 22333333333322224678899999999997422 334566
Q ss_pred Eeccc-CCCCCCCcHHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 000572 398 TAETH-NFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDA 476 (1414)
Q Consensus 398 ~vEth-n~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~ 476 (1414)
++++. .++...+||.+|++++..|+||++|| ||+|++++++|++++ .+.+.++
T Consensus 61 stD~~~~~~~~~~p~~~G~~av~~nlsDiaam--Ga~P~~~~~~L~~~~------------------------~~~l~~~ 114 (323)
T TIGR03267 61 AADGIWGKLLDADPWWAGYCAVLVNVNDIAAM--GGKPVGMVNVLSIND------------------------VDVCREV 114 (323)
T ss_pred EecCcCCcccccChhHhhHHhhhhhhhhHHhc--CCEehhHhhhhcCCC------------------------HHHHHHH
Confidence 77755 45777899999999999999999999 999999999997631 2357899
Q ss_pred HHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCCceEEEEEEEeeeCcc-cccCCCCCCCEEEEEccCCCcccccHH
Q 000572 477 SNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNH-ISKGEPDIGMLVVKIGGPAYRIGMGGG 555 (1414)
Q Consensus 477 ~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~Plv~~~~vG~v~~~~-i~r~~a~~GD~Ivv~G~~~g~~GlgGa 555 (1414)
++|+.++|++||+|+|||||. .. ...+.+.++++|.+++.+ +.+++++|||.|+++|...++.+ +
T Consensus 115 ~~Gi~~a~~~~gi~ivGGdT~-~~----------~~~~~i~vt~iG~~~~~~~~~r~~a~~GD~I~vtg~l~g~~~---~ 180 (323)
T TIGR03267 115 LEGMREGAWKFGVPVVGGHTH-PD----------TPYNALDVAIVGIAKEDCIIRSDTAKPGDLIIFAIDLDGRPY---P 180 (323)
T ss_pred HHHHHHHHHHcCCCEEccccC-CC----------CCcceeeEEEEEEEcCcceeeCCCCCCCCEEEEEEcCCCccc---c
Confidence 999999999999999999994 10 112455678999988766 46778999999999985222211 1
Q ss_pred HHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCC
Q 000572 556 AASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAII 633 (1414)
Q Consensus 556 a~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP 633 (1414)
. ..... ......+++..+. .++...++...+.+++|||+|.|||+.+|.|||+ ++|++|++++||
T Consensus 181 ~---~~~~~-------~~~~~~~~~~~~~---~~~~~~~~~~~~~v~a~~DiSdGGL~~~L~ema~~s~~G~~I~~~~iP 247 (323)
T TIGR03267 181 S---FPLNW-------DTTTMKSPDYLRA---QMDAVVEIAERKLVKAGKDISNPGLIGTLGMLLEASRVGAEVDLESIP 247 (323)
T ss_pred c---cccCc-------cchhccCHHHHHH---HHHHHHHHHHhCCceEEEcCCCCcHHHHHHHHHhhcCCcEEEEcCccc
Confidence 1 11000 0011123333332 2344444445678999999999999999999998 899999999999
Q ss_pred CCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCCeEEEEeCcccccccCCCCCCCCCeEEc
Q 000572 634 VGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDL 713 (1414)
Q Consensus 634 ~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~l~~~~~~~~~~~~~~~~~~~~~dl 713 (1414)
+.+. +...+++..++.++|+++++|++.++++++++++++++++||+|++++.+++.++. ++...+|+
T Consensus 248 ~~~~-~~~~~~l~~~~g~~ll~tv~~e~~~~~~~~~~~~g~~~~~IG~v~~~~~~~l~~~~-----------~~~~~~~~ 315 (323)
T TIGR03267 248 KPED-VDMVTWLKMYPGSGFVLTADPENVREIVRVLEDAGLTASVIGEVIEDGKLYVSDGD-----------ESAVVFDF 315 (323)
T ss_pred CCCC-CCHHHHHHhCCCCCEEEEECchhHHHHHHHHHHcCCcEEEEEEEecCceEEEEECC-----------cceEEEec
Confidence 8765 34444434455668999999999999999999999999999999988888887641 34556666
Q ss_pred chhhh
Q 000572 714 ELERV 718 (1414)
Q Consensus 714 ~~~~l 718 (1414)
.-+.+
T Consensus 316 ~~~~~ 320 (323)
T TIGR03267 316 RKDRI 320 (323)
T ss_pred CCCcc
Confidence 55543
|
A single member of this protein family is found in each of the first ten complete genome sequences of archaeal methanogens, and nowhere else. Sequence similarity to various bacterial proteins is reflected in Pfam models pfam00586 and pfam02769, AIR synthase related protein N-terminal and C-terminal domains, respectively. The functions of proteins in this family are unknown, but their role is likely one essential to methanogenesis. |
| >cd02203 PurL_repeat1 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=320.07 Aligned_cols=265 Identities=14% Similarity=0.184 Sum_probs=212.4
Q ss_pred EeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCC-------CCcHHHHHHHHHHHHHHH
Q 000572 806 GGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKL-------DGEGAAMYDAATALAEAM 878 (1414)
Q Consensus 806 gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~-------~~e~~~l~~~~~gl~eac 878 (1414)
+++++++.++++...|||.+|+++|++|+|||+||||+|+. +..++++..|+.. +...+.+.++++|+.++|
T Consensus 27 ~~~~~~e~~~~~~~~~p~~~g~~~v~~~vsDiaamGa~P~~-~~~~l~~p~~~~~~~~~~~~~~~~~~l~~~~~Gi~~~~ 105 (313)
T cd02203 27 AVVFKVETHNHPSAIEPFGGAATGVGGIIRDILSMGARPIA-LLDGLRFGDLDIPGYEPKGKLSPRRILDGVVAGISDYG 105 (313)
T ss_pred EEEEEeccCCCCCCcCCcccHhhhhhhhhhcccccCCEEEE-EeeEEeecCCcccccccccccCHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999976 4555655332210 112355778999999999
Q ss_pred HHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCC--CccccchHHHHHH
Q 000572 879 IELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAK--GKRRLGGSALAQV 956 (1414)
Q Consensus 879 ~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~--~~~~LGGS~la~~ 956 (1414)
++||++++|||++.++++ ..+|++.++++|.+++ .+.+++.++++|| .| ++ +|. +...++|+.++..
T Consensus 106 ~~~gv~lvGGdt~~~~~~-------~~~p~~~~~~~G~~~~-~~~~~~~~a~~GD-~I-~l-~G~~~~~~gl~G~~~~~~ 174 (313)
T cd02203 106 NCIGIPTVGGEVRFDPSY-------YGNPLVNVGCVGIVPK-DHIVKSKAPGPGD-LV-VL-VGGRTGRDGIGGATFSSK 174 (313)
T ss_pred HHhCCceeeeEEEEECCc-------CCCceEEEEEEEEEeh-hhcccCCCCCCCC-EE-EE-ecCCCCCCCccHHHHHHH
Confidence 999999999999988542 1256888999999875 5678889999997 44 44 353 2355778877653
Q ss_pred -hhh-----cCCCCCCCCChHHHHHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCC-----Cc
Q 000572 957 -FDQ-----VGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEG-----NS 1025 (1414)
Q Consensus 957 -~~~-----~~~~~p~v~d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~-----~~ 1025 (1414)
++. ....++.. ++...+.+++.++.+++.++++||||+|+|||+++|+|||+++++|++|+++.++ .+
T Consensus 175 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~v~a~~DiS~gGL~~~L~ema~as~~G~~I~~~~iP~~~~~~~ 253 (313)
T cd02203 175 ELSENSSELDRPAVQVG-DPFMEKKLQEAILEARETGLIVGIQDLGAGGLSSAVSEMAAKGGLGAEIDLDKVPLREPGMS 253 (313)
T ss_pred HhcCccccccCCCCCcc-CHHHHHHHHHHHHHHHhcCCEEEEEecCCchHHHHHHHHHhcCCceEEEEecCCcccCCCCC
Confidence 221 11223333 4555677788888888889999999999999999999999999999999999764 35
Q ss_pred hHHHhcccccc-eEEEEecCCHHHHHHHHHHcCCCEEEEEEEeCCCcEEEEECCEEEEe
Q 000572 1026 LFQTLFAEELG-LVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLN 1083 (1414)
Q Consensus 1026 ~~~~LFsE~~G-~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i~~~g~~i~~ 1083 (1414)
+...+|+|+++ +|++|++++.+++++++++.|+++++||+|++++.+.|..+++.+++
T Consensus 254 ~~~~~~se~~~~ll~tv~~~~~~~~~~~l~~~gi~~~~IG~vt~~~~~~l~~~~~~~~~ 312 (313)
T cd02203 254 PWEIWISESQERMLLVVPPEDLEEFLAICKKEDLEAAVIGEVTDDGRLRLYYKGEVVAD 312 (313)
T ss_pred HHHHHhcCccccEEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCeEEEEECCeEEee
Confidence 67789998875 69999999999999999999999999999999888999888887765
|
FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM. |
| >TIGR01379 thiL thiamine-monophosphate kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=302.96 Aligned_cols=283 Identities=17% Similarity=0.186 Sum_probs=204.0
Q ss_pred hHHHHHHHHhccC--CCCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhc
Q 000572 340 TLMQIVKSTLQAN--PNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETG 417 (1414)
Q Consensus 340 ~lf~~I~~~~~~~--~~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~ 417 (1414)
+||++|+++++.. .+++++|+||||||++...+..++.+. | ..+|..||+...+||.+|+.+
T Consensus 1 ~E~~~i~~~~~~~~~~~~~~~g~gdDaavi~~~~~~~lvis~-----------D-----~~~~~~~~~~~~~p~~~G~~a 64 (317)
T TIGR01379 1 GEFELIARLLRRLVQDPDVALGIGDDAALVSAPEGRDLVLTT-----------D-----TLVEGVHFPPDTTPEDLGWKA 64 (317)
T ss_pred CHHHHHHHHHhhccCCCCcccCCCCcEEEEecCCCCeEEEEe-----------c-----cccCCcCCCCCCCHHHHHHHH
Confidence 3788888777532 257889999999999753322222211 1 112333444456999999999
Q ss_pred ccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeE
Q 000572 418 AGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTR 497 (1414)
Q Consensus 418 vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~ 497 (1414)
+..++|||+|| ||+|+++++++++ |.. .+...+.++++|+.++|+++|+|++||||.
T Consensus 65 v~~~~sDiaa~--Ga~P~~~~~~~~~-----P~~----------------~~~~~l~~i~~Gi~~a~~~~g~~ivGG~t~ 121 (317)
T TIGR01379 65 VAVNLSDLAAM--GATPKWFLLSLGL-----PSD----------------LDEAWLEAFYDGLFECAKQYGVPLVGGDTV 121 (317)
T ss_pred HHHHHHHHHHc--CCcccEEEEEEEc-----CCC----------------CCHHHHHHHHHHHHHHHHHcCCeEECccCC
Confidence 99999999999 9999999999875 322 123458999999999999999999999994
Q ss_pred EeccccCCCCccccCCceEEEEEEEeeeCcc-cccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccC
Q 000572 498 TFGMRLPSGQRREWLKPIMFSGGIGQIDHNH-ISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQR 576 (1414)
Q Consensus 498 s~~~~~~~g~~~~~~~Plv~~~~vG~v~~~~-i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~ 576 (1414)
. +..|.+.++++|.+++.+ +.+.++++||.|+++|. .|.+++.++.+..+. .. .
T Consensus 122 -~-----------~~~~~i~vt~iG~~~~~~~~~~~~a~~Gd~I~ltg~----~G~~~~~~~~~~~~~-----~~----~ 176 (317)
T TIGR01379 122 -S-----------SPELVVTVTAIGEAPKGRALLRSGAKPGDLVFVTGT----LGDSAAGLALLLKGK-----KE----P 176 (317)
T ss_pred -C-----------CCCcEEEEEEEEEeCCCCceecCCCCCCCEEEEcCc----hhHHHHHHHHHhcCC-----cc----C
Confidence 2 346888889999988766 56778999999999874 667766543332111 00 0
Q ss_pred CCHHHHHHHHHH------HHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCC------CccHH
Q 000572 577 GDAEMAQKLYRV------VRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDH------TLSVL 642 (1414)
Q Consensus 577 ~~p~~e~~l~~~------i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~------~l~p~ 642 (1414)
..+.....+++. ++....+. +.+++|||+| +||+.+|.|||+ ++|++|++++||+.+. +++|+
T Consensus 177 ~~~~~~~~~~~~~~p~~~~~~~~~l~--~~v~a~~DvS-~GL~~~l~ema~~sg~g~~i~~~~ipv~~~~~~~~~~~~~~ 253 (317)
T TIGR01379 177 DEEDDEELLQRHLRPEPRVEEGLALA--GYANAAIDVS-DGLASDLGHIAEASGVGIVIDLDRLPLSSELAAWAEGKDPL 253 (317)
T ss_pred cchhHHHHHHHhcCCCChHHHHHHHh--hhcceeEEch-HhHHHHHHHHHHHcCCcEEEehhcCCCCHHHHHHhcCCCHH
Confidence 011111111111 22222222 2689999999 579999999998 8999999999998754 57888
Q ss_pred HHhcccccc-eeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCCeEEEEe
Q 000572 643 EIWGAEYQE-QDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVD 692 (1414)
Q Consensus 643 ei~~sEsqe-r~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~l~~ 692 (1414)
+++++..++ .++++++|++.++|++.+++ ++++||+|++++++++.+
T Consensus 254 ~~~~~~ge~~~ll~~v~~~~~~~~~~~~~~---~~~~IG~v~~~~~~~~~~ 301 (317)
T TIGR01379 254 EWALSGGEDYELVFTVPPERREALLDAAKG---PLTRIGRVTEGEGVVLLA 301 (317)
T ss_pred HHHhcCCcceeEEEEeCHHHHHHHHhhccC---CceEEEEEEcCCceEEEe
Confidence 887765433 39999999999999888765 899999999887765554
|
Proteins scoring between the trusted and noise cutoff for this model include short forms from the Thermoplasmas (which lack the N-terminal region) and a highly derived form from Campylobacter jejuni. Eukaryotes lack this enzyme, and add pyrophosphate from ATP to unphosphorylated thiamine in a single step. |
| >PRK05731 thiamine monophosphate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-30 Score=302.39 Aligned_cols=282 Identities=17% Similarity=0.174 Sum_probs=204.3
Q ss_pred chhHHHHHHHHhccCCCCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhc
Q 000572 338 VRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETG 417 (1414)
Q Consensus 338 ~~~lf~~I~~~~~~~~~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~ 417 (1414)
+++||++|++.++....+-.++++|||||++..++..++.++ |. +....|++|..+|||.+|+++
T Consensus 2 ~~~E~~~i~~~~~~~~~~~~~~~gdDaavi~~~~~~~lvit~-----------D~----~~~~~~~~~~~~~p~~~g~~a 66 (318)
T PRK05731 2 AMGEFDLIARLFARRPSSRELGIGDDAALLGPPPGQRLVVST-----------DM----LVEGVHFRPDWSSPEDLGYKA 66 (318)
T ss_pred CCCHHHHHHHHHhhCCCccCCCCCCcEEEeccCCCCeEEEEe-----------cc----cccccCcCCCCCCHHHHHHHH
Confidence 457899998877643222227899999999743322222211 10 112357778889999999999
Q ss_pred ccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeE
Q 000572 418 AGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTR 497 (1414)
Q Consensus 418 vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~ 497 (1414)
+..++|||+|| ||+|+++++++++ |+. .+.+.+.++++|+.++|+++|+|++||||.
T Consensus 67 v~~~~sDi~a~--Ga~P~~~~~~l~~-----p~~----------------~~~~~l~~i~~Gi~~~~~~~g~~ivGG~t~ 123 (318)
T PRK05731 67 LAVNLSDLAAM--GARPAAFLLALAL-----PKD----------------LDEAWLEALADGLFELADRYGAELIGGDTT 123 (318)
T ss_pred HHHHHHHHHHc--CCCcceEEEEEEc-----CCC----------------CCHHHHHHHHHHHHHHHHHhCCeEECcccC
Confidence 99999999999 9999999999975 321 124468999999999999999999999994
Q ss_pred EeccccCCCCccccCCceEEEEEEEeeeCcc-cccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccC
Q 000572 498 TFGMRLPSGQRREWLKPIMFSGGIGQIDHNH-ISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQR 576 (1414)
Q Consensus 498 s~~~~~~~g~~~~~~~Plv~~~~vG~v~~~~-i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~ 576 (1414)
. ...|.+.++++|.+++.. +.+.+++|||.|+++|. +|.+++...... ... + .
T Consensus 124 ~------------~~~~~i~vt~iG~~~~~~~~~~~~a~~Gd~i~ltg~----~G~~~~g~~~~~-~~~--~-------~ 177 (318)
T PRK05731 124 R------------GPDLSISVTAIGDVPGGRALRRSGAKPGDLVAVTGT----LGDSAAGLALLL-NGL--R-------V 177 (318)
T ss_pred C------------CCCcEEEEEEEEEcCCCCcccccCCCCCCEEEEECC----ccHHHHHHHHHh-cCC--C-------C
Confidence 1 234777889999988765 66778999999999985 556555422111 110 0 1
Q ss_pred CCHHHHHHHHHH------HHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCC------CccHH
Q 000572 577 GDAEMAQKLYRV------VRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDH------TLSVL 642 (1414)
Q Consensus 577 ~~p~~e~~l~~~------i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~------~l~p~ 642 (1414)
.....++..+++ ++....+ .+.+++|||+| +||+.+|.|||+ ++|++|++++||+.+. +++|+
T Consensus 178 ~~~~~~~~~~~~~~p~~~~~~~~~~--~~~v~a~~DiS-~GL~~~l~ema~~s~~g~~i~~~~ipi~~~~~~~~~~~~~~ 254 (318)
T PRK05731 178 PDADAAALISRHLRPQPRVGLGQAL--AGLASAAIDIS-DGLAADLGHIAEASGVGADIDLDALPISPALREAAEGEDAL 254 (318)
T ss_pred ChhhHHHHHHHhcCCCCCHHHHHHH--hhhchhheech-HhHHHHHHHHHHHCCCeEEEeHHhCCCCHHHHHHhcCCCHH
Confidence 111111111111 1111112 23489999999 599999999998 8999999999998643 45677
Q ss_pred HHhcccccc-eeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCC
Q 000572 643 EIWGAEYQE-QDAVLVKPESRDLLQSICERERVSMAVIGTISGEG 686 (1414)
Q Consensus 643 ei~~sEsqe-r~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~ 686 (1414)
++.++..++ +|+++|+|++.++|+++++++++++++||+|++++
T Consensus 255 ~~~~~~g~~~~ll~~v~~~~~~~~~~~l~~~g~~~~~IG~v~~~~ 299 (318)
T PRK05731 255 RWALSGGEDYELLFTFPPENRGALLAAAGHLGVGVTIIGRVTEGE 299 (318)
T ss_pred HHHhcCCCceeEEEEECHHHHHHHHHHHHhcCCCceEEEEEEcCc
Confidence 777776555 59999999999999999999999999999999876
|
|
| >TIGR02124 hypE hydrogenase expression/formation protein HypE | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-30 Score=300.04 Aligned_cols=294 Identities=19% Similarity=0.243 Sum_probs=205.5
Q ss_pred HHHHHHhccCCCCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEeccc-CCCCCCCcHHHHhhccccc
Q 000572 343 QIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETH-NFPCAVAPYPGAETGAGGR 421 (1414)
Q Consensus 343 ~~I~~~~~~~~~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEth-n~p~~idP~~gA~t~vgg~ 421 (1414)
++|++++++...+.++++||||||++.. +. .+++++++. -.|...+++++|+++++.|
T Consensus 3 ~~i~~~~~~~~~~~~~~~gdDaavi~~~-~~--------------------~lv~ttD~~~~~p~~~~~~~iG~~av~~n 61 (320)
T TIGR02124 3 QLIQELFLKAFGNEILAAMEDAAVLELS-GG--------------------RLAFSTDSFVVDPLFFPGGDIGKLAVCGT 61 (320)
T ss_pred HHHHHHHHHhcCCcccCCCCceEEEeeC-CC--------------------eEEEEecCCccCCcccCcccHHHHHHHHH
Confidence 3566666544456789999999999743 12 233444422 1122234567999999999
Q ss_pred ccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEecc
Q 000572 422 IRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGM 501 (1414)
Q Consensus 422 irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~ 501 (1414)
+|||+|| ||+|++++++|.+ |.. .+.+.++++++|+.++|++||+|++||||..+ +
T Consensus 62 ~sDiaam--Ga~P~~~~~~l~l-----p~~----------------~~~~~l~~~~~Gi~~a~~~~gi~ivGGdt~~~-~ 117 (320)
T TIGR02124 62 VNDVAVS--GAKPLYLSCGFIL-----EEG----------------FPIEDLERIVKSMAEAARKAGVKIVTGDTKVV-E 117 (320)
T ss_pred HHHHHHc--CCcchhhEEEEEc-----CCC----------------CCHHHHHHHHHHHHHHHHHcCCEEEeeeeEEc-c
Confidence 9999999 9999999999975 322 24567899999999999999999999999533 2
Q ss_pred ccCCCCccccCCceEEEEEEEeeeCcc-cccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHH
Q 000572 502 RLPSGQRREWLKPIMFSGGIGQIDHNH-ISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAE 580 (1414)
Q Consensus 502 ~~~~g~~~~~~~Plv~~~~vG~v~~~~-i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~ 580 (1414)
. + ....+.+..+++|.+++.+ +.+++++|||.|+++|. +|.+|++....... ..+... ....
T Consensus 118 ~---~---~~~~~~i~~t~~G~~~~~~~~~r~~a~~GD~I~ltg~----~G~~g~~l~~~~~~-----~~~~~~--~~~~ 180 (320)
T TIGR02124 118 K---G---KADGIFINTTGIGVIPSGIPISAHNLQPGDKIIVSGT----IGDHGAAILAVREG-----LGFETN--LESD 180 (320)
T ss_pred C---C---CCCcEEEEEEEEEEEcCCccccccCCCCCCEEEEeCC----ccHHHHHHHHhhcc-----cCCCcc--chhh
Confidence 1 0 1234556679999998766 46777999999999885 56666654332111 011100 0001
Q ss_pred HHHHHHHHHHHHHHhhcc-CCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCC--------CccHHHHhcccc
Q 000572 581 MAQKLYRVVRACIEMGET-NPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDH--------TLSVLEIWGAEY 649 (1414)
Q Consensus 581 ~e~~l~~~i~~~~~l~~~-~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~--------~l~p~ei~~sEs 649 (1414)
. +.+.+++.. +... ..+++|||+|.|||..+|.|||+ ++|++|++++||+.+. +++|++. ++
T Consensus 181 ~-~~~~~~~~~---~~~~~~~v~a~~DiSdgGL~~~L~ela~~s~~g~~I~~~~ipi~~~~~~~~~~~~~~~~~~---~~ 253 (320)
T TIGR02124 181 C-APLNGLVET---LLNAGPAVHAMRDATRGGLAAVLNEWAQASGVGIVIEEEKIPVKEEVKGACELLGLDPLYL---AN 253 (320)
T ss_pred h-hhhHHHHHH---HHhccCCceEEECCCCccHHHHHHHHHHHcCCeEEEecccCCCCHHHHHHHHHhCCCHHHH---hc
Confidence 1 111222222 2223 35899999999999999999998 8999999999998753 3455543 34
Q ss_pred cceeEEEEcCCCHHHHHHHHHH--cCCCeEEEEEEEcCCe--EEEEeCcccccccCCCCCCCCCeEEcchh
Q 000572 650 QEQDAVLVKPESRDLLQSICER--ERVSMAVIGTISGEGR--VVLVDSAAVQKCQSSGLPPPPPAVDLELE 716 (1414)
Q Consensus 650 qer~ll~V~pe~~~~l~~i~~~--~~~~~~vIG~vt~~~~--l~l~~~~~~~~~~~~~~~~~~~~~dl~~~ 716 (1414)
+++++++|+|++.++|++++++ +++++++||+|++++. +++..+. ++++++|.|..
T Consensus 254 ~G~ll~~v~~~~~~~~~~~~~~~~~gi~~~~IG~v~~~~~~~v~~~~~~-----------~~~~~l~~~~~ 313 (320)
T TIGR02124 254 EGKLVLAVPPEAAEKVLEILKSHPYGKDAAIIGEVVERKEGRVVLKTAY-----------GGKRILDMPSG 313 (320)
T ss_pred CCcEEEEECHHHHHHHHHHHHhCCCCCCEEEEEEEEcCCCCEEEEEecC-----------CCEEECCCCCC
Confidence 4579999999999999999988 6899999999998655 7766411 35566666654
|
This family contains HypE (or HupE), a protein required for expression of catalytically active hydrogenase in many systems. It appears to be an accessory protein involved in maturation rather than a regulatory protein involved in expression. HypE shows considerable homology to the thiamine-monophosphate kinase ThiL (TIGR01379) and other enzymes. |
| >PRK01213 phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-30 Score=329.18 Aligned_cols=276 Identities=21% Similarity=0.284 Sum_probs=214.7
Q ss_pred CceeeeccCcceeecCCcccccccCCCCCccccccCC-ceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCce
Q 000572 355 NSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQ-DLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSF 433 (1414)
Q Consensus 355 ~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~-~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~ 433 (1414)
+++++.||||||++. .+ +..+++++++++.++.+|||.+|+.+|++++||++|| ||+
T Consensus 421 ~tv~~pGdDaAVi~~--------------------~~~~~~l~~s~D~~~~~~~~~P~~~g~~AV~~avsdiaa~--Ga~ 478 (724)
T PRK01213 421 NTVVKPGGDAAVLRI--------------------RGGGKGLALTTDCNPRYVYLDPYEGAKLAVAEAARNLAAV--GAT 478 (724)
T ss_pred CccccCCCCeEEEEe--------------------cCCCEEEEEEecCCCCccccCHHHHHHHHHHHHHHHHhcc--CCe
Confidence 455666677776652 22 4568899999888888999999999999999999999 999
Q ss_pred eEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCC
Q 000572 434 VVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLK 513 (1414)
Q Consensus 434 P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~ 513 (1414)
|++++++|+|++|..|+ ..+.+.++++|+.++|++||+|+|||+| +++|++. + ....
T Consensus 479 P~~~~~~l~~~~p~~~~------------------~~~~l~~~~~Gi~~a~~~~gvpivGG~~-s~~n~~~-~---~~i~ 535 (724)
T PRK01213 479 PLAITDCLNFGNPEKPE------------------VMWQFVEAVRGLADACRALGTPVVGGNV-SLYNETG-G---TAIY 535 (724)
T ss_pred ehhheeeeecCCCCchH------------------HHHHHHHHHHHHHHHHHHhCCCccccee-eeeCCCC-C---cccC
Confidence 99999999998754332 1345899999999999999999999999 5666531 1 1345
Q ss_pred ceEEEEEEEeeeCc-ccccCCC-CCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHH
Q 000572 514 PIMFSGGIGQIDHN-HISKGEP-DIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRA 591 (1414)
Q Consensus 514 Plv~~~~vG~v~~~-~i~r~~a-~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~ 591 (1414)
|++.++++|.+++. .+.++++ ++||.|+++|.. ...+||+.++....+.. ...++..+...++++.+.+
T Consensus 536 pt~~vt~vG~~~~~~~~~~~~~k~~GD~I~l~g~~--~~~~ggs~~~~~~~~~~-----~~~~p~~~~~~~~~~~~~l-- 606 (724)
T PRK01213 536 PTPVIGMVGLIDDVSKRTTSGFKKEGDLIYLLGET--KDELGGSEYLKVIHGHV-----GGRPPKVDLEAEKRLQELV-- 606 (724)
T ss_pred CcceEEEEEEecCHhhCcChhcCCCCCEEEEEcCC--CCCccHHHHHHHhcCCc-----CCCCCCCCHHHHHHHHHHH--
Confidence 77778999998763 4667776 999999999863 34567776553332321 1122334555566654433
Q ss_pred HHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHH
Q 000572 592 CIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSIC 669 (1414)
Q Consensus 592 ~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~ 669 (1414)
.++.+.+.|+||||+|.|||+.+|.|||. ++|++|+++. + .++.+.|++|++.|++++|+|++.++|++++
T Consensus 607 -~~l~~~g~v~a~~DvSdGGL~~aL~ema~as~~G~~I~l~~-~-----~~~~~~Lf~e~~g~~v~~V~~~~~~~v~~~l 679 (724)
T PRK01213 607 -REAIREGLVTSAHDVSEGGLAVALAEMAIAGGLGAEVDLSD-G-----LRPDALLFSESQGRYVVSVPPENEEAFEALA 679 (724)
T ss_pred -HHHHHCCCeEEEEeCCcCcHHHHHHHHHhcCCceEEEEeCC-C-----CChHHHhhCCCCceEEEEEchhHHHHHHHHH
Confidence 44557789999999999999999999998 8999999883 2 3456789999999999999999999999999
Q ss_pred HHcCCCeEEEEEEEcCCeEEEEe
Q 000572 670 ERERVSMAVIGTISGEGRVVLVD 692 (1414)
Q Consensus 670 ~~~~~~~~vIG~vt~~~~l~l~~ 692 (1414)
++.++++++||+|++ ..+.+..
T Consensus 680 ~~~gi~~~~IG~v~~-~~l~i~~ 701 (724)
T PRK01213 680 EAAGVPATRIGVVGG-DALKVKG 701 (724)
T ss_pred HHCCCCeEEEEEEcC-CEEEEec
Confidence 999999999999987 7777754
|
|
| >cd02691 PurM-like2 AIR synthase (PurM) related protein, archaeal subgroup 2 of unknown function | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=297.12 Aligned_cols=281 Identities=15% Similarity=0.183 Sum_probs=199.7
Q ss_pred HHHHHhccCCCCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhccccccc
Q 000572 344 IVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIR 423 (1414)
Q Consensus 344 ~I~~~~~~~~~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~ir 423 (1414)
+|...+.+..+++++.++|||+++.. ++..+++++|..||+...+||..|++++..|+|
T Consensus 19 ~~~~~~~~~~~~~~~~~dDdaa~~~~---------------------~~~~lv~ttDgvh~~~~~~p~~~G~~av~~nvS 77 (346)
T cd02691 19 KLAELIGKTGEVSIVAQDDDAGVDAA---------------------DVEYIVVAIDGIHSRLSDFPFLAGFHATRAALR 77 (346)
T ss_pred HHHHHHHHhcCCccccccCceEEEcc---------------------CCCeEEEEeCCCCCCcccChHHHHHHHHHHHHH
Confidence 34444433447899999999998863 233466788877777667999999999999999
Q ss_pred chhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEecccc
Q 000572 424 DTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRL 503 (1414)
Q Consensus 424 DiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~ 503 (1414)
||+|| ||+|+++++++++ |+. .+.+.++++++|+.++|++||++++||||.+.....
T Consensus 78 DIaAm--Ga~P~~~l~sl~l-----p~~----------------~~~~~l~~i~~Gi~~a~~~~gv~lvGGdT~~~~~~~ 134 (346)
T cd02691 78 DVMVM--GARPVALLSDIHL-----ADD----------------GDVGKLFDFTAGVTAVSEATGVPLVAGSTLRIGGDM 134 (346)
T ss_pred HHHHc--CCchHHhheeeec-----CCC----------------CCHHHHHHHHHHHHHHHHHcCCeEEeeeeEEecCCc
Confidence 99999 9999999999985 322 235678899999999999999999999996432211
Q ss_pred CCCCccccCCceEE-EEEEEeeeCcccccCCCCCCCEEEEEccCCCcccccHHHHHH-hhhCCCCCccccccccCCCHHH
Q 000572 504 PSGQRREWLKPIMF-SGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASS-MVSGQNDADLDFNAVQRGDAEM 581 (1414)
Q Consensus 504 ~~g~~~~~~~Plv~-~~~vG~v~~~~i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss-~~~~~~~~~~~~~~Vq~~~p~~ 581 (1414)
....++++ ++++|.+++..+.|++++|||.|+++|+ +||++.+. ...... .+.. .. ...+..
T Consensus 135 ------~~~~~l~~svT~iG~~~~~~~~r~gA~pGD~I~vtg~------~Gg~~~~~l~ll~~~-~~~~-~~--~~~~~~ 198 (346)
T cd02691 135 ------VLGDRLVGGVGAVGRSKSDPSRRKNAEPGDLILMTEG------AGGGTITTTAIYHGM-PDVV-EE--TLNVDF 198 (346)
T ss_pred ------ccCCceEEEEEEEEEeccccccccCCCCCCEEEEECC------ccHHHHHHHHHHccc-hhHH-Hh--hccHHH
Confidence 01234554 5999988766677888999999999985 33332111 111110 0000 00 001111
Q ss_pred HHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCC--CCCC--------CccHHHHhcccc
Q 000572 582 AQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAII--VGDH--------TLSVLEIWGAEY 649 (1414)
Q Consensus 582 e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP--~~~~--------~l~p~ei~~sEs 649 (1414)
.+. .....+......+++|||+|.|||..+|.||++ ++|++||+++|| ++++ +++|+.+ +
T Consensus 199 ~~~----~~~l~~~~~~~~v~am~DiSdGGL~~~L~ela~aSgvg~~Id~~~IP~pl~~~v~~~~~~~~~~p~~~----~ 270 (346)
T cd02691 199 IKA----CEALRDSGLVSKVHSMTDVTNGGIRGDALEISKTAGVSLVFDEEKVRSLINPKVLKMLEELGIDPLGV----S 270 (346)
T ss_pred HHH----HHHHHHhCCCCCeEEEEcCCCchHHHHHHHHHHHcCCEEEEEhhhCccccCHHHHHHHHHcCCChhHc----c
Confidence 111 111111112345899999998899999999998 999999999998 6544 2344432 3
Q ss_pred cceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCCeEEEEe
Q 000572 650 QEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVD 692 (1414)
Q Consensus 650 qer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~l~~ 692 (1414)
.+.++++|+|++.+++++.++++++++++||+|++++.+++..
T Consensus 271 ~~~LL~tv~~~~~~~v~~~l~~~g~~~~vIG~V~~~~~~~l~~ 313 (346)
T cd02691 271 LDSLMIIAPEEDAVDIIRTLREAGVRADEVGRVEEGRGVPLVV 313 (346)
T ss_pred cCcEEEEEChHHHHHHHHHHHhcCCCeEEEEEEEeCCceEEEe
Confidence 3469999999999999999999999999999999877777754
|
The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain. |
| >cd02194 ThiL ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage of exogenous thiamine | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=292.88 Aligned_cols=273 Identities=16% Similarity=0.214 Sum_probs=198.5
Q ss_pred hHHHHHHHHhccCC--CCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhc
Q 000572 340 TLMQIVKSTLQANP--NNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETG 417 (1414)
Q Consensus 340 ~lf~~I~~~~~~~~--~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~ 417 (1414)
+||++|+++++..+ ++++.++||||||++ ..+..++.++ | ..+|..|||..++||.+|+++
T Consensus 1 ~E~~li~~~~~~~~~~~~~~~~~gdDaavi~-~~~~~lv~t~-----------D-----~~~~~~~f~~~~~p~~~G~~a 63 (291)
T cd02194 1 GEFELIDRLFKRLGAGPGVLLGIGDDAAVLK-PPGGRLVVTT-----------D-----TLVEGVHFPPDTTPEDIGWKA 63 (291)
T ss_pred CHHHHHHHHHhhcCCCCccCCCCCCCEEEec-CCCCeEEEEe-----------c-----ccccccCCCCCCCHHHHHHHH
Confidence 37889988776443 357789999999997 2222222211 1 233444566667999999999
Q ss_pred ccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeE
Q 000572 418 AGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTR 497 (1414)
Q Consensus 418 vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~ 497 (1414)
+..++|||+|| ||+|+++++++++++. ...+.+.++++|+.++|++||+|++||||.
T Consensus 64 v~~~~sDi~a~--Ga~P~~~~~~l~~p~~---------------------~~~~~l~~i~~Gi~~a~~~~g~~liGGdt~ 120 (291)
T cd02194 64 LAVNLSDLAAM--GARPLGFLLSLGLPPD---------------------TDEEWLEEFYRGLAEAADRYGVPLVGGDTT 120 (291)
T ss_pred HHHHHHHHHHc--CCccceeEEEEECCCC---------------------CCHHHHHHHHHHHHHHHHHcCCeEEcccCC
Confidence 99999999999 9999999999987431 124468999999999999999999999994
Q ss_pred EeccccCCCCccccCCceEEEEEEEeeeCcc-cccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccC
Q 000572 498 TFGMRLPSGQRREWLKPIMFSGGIGQIDHNH-ISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQR 576 (1414)
Q Consensus 498 s~~~~~~~g~~~~~~~Plv~~~~vG~v~~~~-i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~ 576 (1414)
. +..|.+.++++|.+++.. +.++++++||.|+++|. .|.+++.+........ .
T Consensus 121 ~------------~~~~~i~vt~iG~~~~~~~~~~~~a~~GD~I~ltg~----~G~~~~g~~~~~~~~~---~------- 174 (291)
T cd02194 121 S------------GSELVISVTALGEVEKGKPLRRSGAKPGDLLYVTGT----LGDAAAGLALLLGGLK---L------- 174 (291)
T ss_pred C------------CCCeEEEEEEEEecCCCCceecCCCCCCCEEEEeCC----ccHHHHHHHHHhCCCC---C-------
Confidence 2 346777889999988754 67778999999999985 5666554332221110 0
Q ss_pred CCHHHHHHHHHH------HHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCC------CCccHH
Q 000572 577 GDAEMAQKLYRV------VRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGD------HTLSVL 642 (1414)
Q Consensus 577 ~~p~~e~~l~~~------i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~------~~l~p~ 642 (1414)
.....++..... ++....+. +..+++|||+| +||+.+|.|||+ ++|++|++++||+.+ .+++|+
T Consensus 175 ~~~~~~~~~~~~~~p~~~~~~~~~l~-~~~v~a~~DiS-dGL~~~l~ela~~s~~g~~i~~~~ipi~~~~~~~~~~~~p~ 252 (291)
T cd02194 175 PEELYEELIERHLRPEPRLELGRALA-EGLATAMIDIS-DGLLADLGHIAEASGVGAVIDLDKLPLSPALRAAELGEDAL 252 (291)
T ss_pred ChhhHHHHHHHhcCCCCcHHHHHHHH-hCCCeEEEEch-HhHHHHHHHHHHHcCCeEEEecccCCCCHHHHhhhcCCCHH
Confidence 000111111100 12222222 25799999999 589999999998 899999999999965 357888
Q ss_pred HHhcccccc-eeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEE
Q 000572 643 EIWGAEYQE-QDAVLVKPESRDLLQSICERERVSMAVIGTIS 683 (1414)
Q Consensus 643 ei~~sEsqe-r~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt 683 (1414)
++.++..++ .++++++|++. ++.++..++++++||+|+
T Consensus 253 ~~~~~gGedy~ll~~v~~~~~---~~~~~~~~~~~~~IG~v~ 291 (291)
T cd02194 253 ELALSGGEDYELLFTVPPENA---EAAAAKLGVPVTVIGRVT 291 (291)
T ss_pred HHHhcCCcceEEEEEechhHh---HHHHhhcCCCceEEEEEC
Confidence 887776655 58999999876 556677899999999985
|
Thiamine salvage occurs in two steps, with thiamine kinase catalyzing the formation of thiamine phosphate, and ThiL catalyzing the conversion of this intermediate to thiamine pyrophosphate. The N-terminal domain of ThiL binds ATP and is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, FGAM synthase and selenophosphate synthetase (SelD). |
| >cd02192 PurM-like3 AIR synthase (PurM) related protein, subgroup 3 of unknown function | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=290.19 Aligned_cols=252 Identities=16% Similarity=0.121 Sum_probs=190.3
Q ss_pred CCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecc-cCCCCCCCcHHHHhhcccccccchhccCCCc
Q 000572 354 NNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAET-HNFPCAVAPYPGAETGAGGRIRDTHATGRGS 432 (1414)
Q Consensus 354 ~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEt-hn~p~~idP~~gA~t~vgg~irDiaAmGrGA 432 (1414)
-+++.++||||||++. ++..+++++++ |..++..+||.+|+++++.|+||++|| ||
T Consensus 28 ~~~~~g~GdDaavi~~---------------------~~~~lvit~D~~~~~~~~~~p~~~G~~av~~~vsDiaa~--Ga 84 (283)
T cd02192 28 LGVAADLGDDAAAIPD---------------------GDGYLLLAADGIWPSLVEADPWWAGYCSVLVNVSDIAAM--GG 84 (283)
T ss_pred cCccCCCCCCEEEEec---------------------CCcEEEEEecccccccccCCHHHHHHHHHHHHHHHHHhc--CC
Confidence 4677899999999952 13346677776 333556799999999999999999999 99
Q ss_pred eeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccC
Q 000572 433 FVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWL 512 (1414)
Q Consensus 433 ~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~ 512 (1414)
+|+++++++++++ .+.+.++++|+.++|++||+|++||||. .+ ..
T Consensus 85 ~P~~~~~~l~~p~------------------------~e~l~~i~~Gi~~a~~~~gi~ivGGdt~-~~----------~~ 129 (283)
T cd02192 85 RPLAMVDALWSPS------------------------AEAAAQVLEGMRDAAEKFGVPIVGGHTH-PD----------SP 129 (283)
T ss_pred EeeeeeeeecCCC------------------------HHHHHHHHHHHHHHHHHcCCcEecccCC-CC----------CC
Confidence 9999999997632 1357899999999999999999999994 21 23
Q ss_pred CceEEEEEEEeeeCcccccCCCCCCCEEEEEccCCCcc-cccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHH
Q 000572 513 KPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRI-GMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRA 591 (1414)
Q Consensus 513 ~Plv~~~~vG~v~~~~i~r~~a~~GD~Ivv~G~~~g~~-GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~ 591 (1414)
.|.+.++++|.+++....++++++||.|+++|...+.. |.++ ..... ....++...+. .++.
T Consensus 130 ~~~i~vt~iG~~~~~~~~r~~a~~GD~I~vtg~l~g~~~g~~~-----~~~~~---------~~~~~~~~~~~---~~~~ 192 (283)
T cd02192 130 YNALSVAILGRARKDLLISFGAKPGDRLILAIDLDGRVHPSPP-----PNWDA---------TTMKSPALLRR---QIAL 192 (283)
T ss_pred CCeEEEEEEEEEcCCccccCCCCCCCEEEEEeCCCCccccccc-----cCccc---------cccCCHHHHHH---HHHH
Confidence 46777799999887654477899999999998643433 2110 00000 00112222222 2344
Q ss_pred HHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHH
Q 000572 592 CIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSIC 669 (1414)
Q Consensus 592 ~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~ 669 (1414)
..++...+.+++|||+|.|||+.+|.||++ ++|++||+++||+.+. ....+++..+.+.+|+++++|++.+++++.+
T Consensus 193 ~~~l~~~~~v~a~~DiSdGGL~~~L~ela~~sg~G~~Id~~~ip~~~~-~~~~~~l~~~~~~~ll~~v~~~~~~~v~~~l 271 (283)
T cd02192 193 LPELAERGLVHAAKDISNPGIIGTLGMLLEASGVGAEIDLDAIPRPEG-VDLERWLKCFPGFGFLLTARPENADEVVAVF 271 (283)
T ss_pred HHHHHHcCCCceeecCCCCcHHHHHHHHHHhcCCcEEEecccCCCCCC-CChHHHHHhCCCCceEEEECHHhHHHHHHHH
Confidence 444455677999999999999999999998 8999999999999764 3334445455566799999999999999999
Q ss_pred HHcCCCeEEEEE
Q 000572 670 ERERVSMAVIGT 681 (1414)
Q Consensus 670 ~~~~~~~~vIG~ 681 (1414)
+++++++++||+
T Consensus 272 ~~~gi~~~~IG~ 283 (283)
T cd02192 272 AAVGITAAVIGE 283 (283)
T ss_pred HHcCCcEEEeCC
Confidence 999999999995
|
The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain. |
| >cd02197 HypE HypE (Hydrogenase expression/formation protein) | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=286.27 Aligned_cols=260 Identities=21% Similarity=0.222 Sum_probs=182.5
Q ss_pred ceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeE
Q 000572 356 SVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVV 435 (1414)
Q Consensus 356 ~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~ 435 (1414)
...+++|||||++... ..++.++ | +.+|..|| .+++..|+++++.|+|||+|| ||+|+
T Consensus 21 ~~~~~~DDaavi~~~~-~~lv~tt-----------D-----~~~~~~~~---~~~~~iG~~av~~~~sDiaam--Ga~P~ 78 (293)
T cd02197 21 PILEVLEDAAALLVGG-GRLAFTT-----------D-----SFVVSPLF---FPGGDIGKLAVCGTVNDLAMM--GAKPL 78 (293)
T ss_pred cccccCCceEEEecCC-ceEEEEe-----------c-----CccccCcc---cCchhHHHHHHHhhHHHHHHc--CCcch
Confidence 3467889999997532 2222221 1 11233222 245888999999999999999 99999
Q ss_pred EEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCCce
Q 000572 436 ASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPI 515 (1414)
Q Consensus 436 a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~Pl 515 (1414)
++++++++ |.. .+.++++++++|+.++|++||+|++||||. +++.. ....+.
T Consensus 79 ~~~~~l~l-----p~~----------------~~~~~l~~~~~Gi~~~~~~~g~~ivGGdt~-~~~~~------~~~~~~ 130 (293)
T cd02197 79 YLSLGFIL-----EEG----------------FPLEDLERIVKSMAEAAREAGVKIVTGDTK-VVPKG------KADGIF 130 (293)
T ss_pred hheEEEEC-----CCC----------------CCHHHHHHHHHHHHHHHHHcCCEEEeceeE-eccCC------ccCceE
Confidence 99999986 321 246788999999999999999999999995 33220 012355
Q ss_pred EEEEEEEeeeCcc-cccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHH
Q 000572 516 MFSGGIGQIDHNH-ISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIE 594 (1414)
Q Consensus 516 v~~~~vG~v~~~~-i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~ 594 (1414)
+..+++|.+++.. +.|++++|||.|+|+|. +|.+|++......+ ...... ... ..+.+.++.+....
T Consensus 131 i~~t~~G~~~~~~~~~r~~a~~GD~i~vtG~----~G~~~~~l~~~~~~-----~~~~~~--~~~-~~~~~~~~~~~~~~ 198 (293)
T cd02197 131 INTTGIGVIPRGVIISPSNIRPGDKIIVSGT----IGDHGAAILAAREG-----LGFETD--IES-DCAPLNGLVEALLE 198 (293)
T ss_pred EEEEEEEEEcCCccccccCCCCCCEEEEeCC----ccHHHHHHHhcccC-----CCcchh--hhh-hhhhhhHHHHHHHh
Confidence 5669999998765 56788999999999984 55655543211111 001100 000 01111222222221
Q ss_pred hhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCC--------CccHHHHhcccccceeEEEEcCCCHHH
Q 000572 595 MGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDH--------TLSVLEIWGAEYQEQDAVLVKPESRDL 664 (1414)
Q Consensus 595 l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~--------~l~p~ei~~sEsqer~ll~V~pe~~~~ 664 (1414)
..+.+++|||+|.|||+.+|.|||+ ++|++|++++||+.+. +++|+++. +..+++++++|++.++
T Consensus 199 --~~~~v~a~~DiSdgGL~~~L~~~a~~sg~g~~I~~~~iP~~~~~~~~~~~~~~~~~~~~---~~G~ll~tv~~~~~~~ 273 (293)
T cd02197 199 --AGPGIHAMRDPTRGGLAAVLNEIARASGVGIEIEEEAIPVREEVRGACEMLGLDPLYLA---NEGKFVAIVPPEDAEE 273 (293)
T ss_pred --cCCCceEEEcCCcchHHHHHHHHHHHcCCeEEEeeccCCCCHHHHHHHHHhCcCHHHHh---cCCcEEEEECHHHHHH
Confidence 2247899999999999999999998 8999999999999765 34555443 3457999999999999
Q ss_pred HHHHHHHc--CCCeEEEEEE
Q 000572 665 LQSICERE--RVSMAVIGTI 682 (1414)
Q Consensus 665 l~~i~~~~--~~~~~vIG~v 682 (1414)
+.+++++. ++++++||+|
T Consensus 274 i~~~l~~~~~gi~~~vIG~v 293 (293)
T cd02197 274 VLEALRSHPLGKEAAIIGEV 293 (293)
T ss_pred HHHHHHhCCCCCCeEEEEeC
Confidence 99999998 9999999985
|
HypE is involved in Ni-Fe hydrogenase biosynthesis. HypE dehydrates its own carbamoyl moiety in an ATP-dependent process to yield the enzyme thiocyanate. The N-terminal domain of HypE is related to the ATP-binding domains of the AIR synthases, selenophosphate synthetase (SelD), and FGAM synthase and is thought to bind ATP. |
| >TIGR01735 FGAM_synt phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=323.98 Aligned_cols=294 Identities=15% Similarity=0.059 Sum_probs=235.5
Q ss_pred CcCcEEEEEecC------------------CCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhcc--Ccccccccc
Q 000572 790 TLADVAVIAQTY------------------TDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWA--KVTSLSHVK 849 (1414)
Q Consensus 790 pg~DaAVi~~~~------------------~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~--Ga~Pl~~v~ 849 (1414)
++|++|||.... ....+++++++.|++++.++||.||..+|++++||++++ ||+|++.+
T Consensus 256 ~~dNa~vi~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~k~Ethnhpt~i~Py~GAatgvgg~iRD~~a~GrGa~PiA~~- 334 (1310)
T TIGR01735 256 YKDNSSVIEGHKVGRLRPDPPTRPEYRQHQEDLVHILMKVETHNHPTAIAPFPGASTGAGGEIRDEGATGRGAKPKAGL- 334 (1310)
T ss_pred ecCcEEEEEcccccccccccccccccccccccceEEEEEeccCCCCCccCchhhHHHHHhHhHhChhhhCCCCeeeeee-
Confidence 467888887430 113689999999999999999999999999999999999 99998844
Q ss_pred cccccccccC------------CCCcHHH----HHHHHHHHHHHHHHhCCccccccccccccccc--CCc-eeecCCcEE
Q 000572 850 ASGNWMYAAK------------LDGEGAA----MYDAATALAEAMIELGIAIDGGKDSLSMAAYS--GGE-VVKAPGSLV 910 (1414)
Q Consensus 850 ls~n~~~p~~------------~~~e~~~----l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~--~~~-~v~~pptlv 910 (1414)
.++||+.|.. .|+...+ +.++++|++++|+++|+|+|+|++|.|+++.. +++ ...++|++.
T Consensus 335 d~l~fg~p~~~~~~~~~e~~~~~P~~~~~p~~Il~e~~~G~~~~gn~~G~P~v~G~vs~f~~~~~~~~g~~~~~~~P~~~ 414 (1310)
T TIGR01735 335 TGFCVSNLNIPGLEQPWEDPFQKPERIASPLDIMIEAPLGAAAFNNEFGRPNLLGYFRTFELKASLPGGQVRGYHKPIML 414 (1310)
T ss_pred eeeecCCCCCCCCCCccccccCCchhhccHHHHHHHHHHHHHHHhhhhCCcccceeeeeccccccccccccccccCCccE
Confidence 4578877721 1211222 66789999999999999999999998876310 010 123678999
Q ss_pred EEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCC--ccccchHHHHHH-hhh-----cCCCCCCCCChHHHHHHHHHHHH
Q 000572 911 ISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKG--KRRLGGSALAQV-FDQ-----VGNESPDLEDVPYLKRVFETVQD 982 (1414)
Q Consensus 911 ita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~--~~~LGGS~la~~-~~~-----~~~~~p~v~d~~~lk~~~~~v~~ 982 (1414)
++++|.+++ .+ +....+++|| .+|+| |.. +..||||.+... .+. ....+|.. |++..|++++.+..
T Consensus 415 ~g~vG~i~~-~~-~~~~~~~~G~-~ivll--Gg~~~rdglgGs~~ss~~~g~~~~~~~~~~Vq~g-dp~~ek~~~~~i~~ 488 (1310)
T TIGR01735 415 AGGIGSIDA-EH-IQKGEIEPGA-LLIVL--GGPAMLIGLGGGAASSMVSGTNTADLDFASVQRG-NPEMERRCQEVIDR 488 (1310)
T ss_pred EEEEEEech-hh-cccCCCCCCC-EEEEE--CCCCCCCCccHHHHHHHHhCCCcccccCCCCCCC-CHHHHHHHHHHHHH
Confidence 999999997 34 6666778997 45555 654 448999987653 333 12345555 89999998888887
Q ss_pred HHhc---cCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCC-----CchHHHhcccccce-EEEEecCCHHHHHHHH
Q 000572 983 LIGD---ELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEG-----NSLFQTLFAEELGL-VLEVSKSNLDTVSKKL 1053 (1414)
Q Consensus 983 l~~~---g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~-----~~~~~~LFsE~~G~-vl~V~~~~~~~v~~~l 1053 (1414)
.++. ++|.|+||+|.|||+.+|.|||..+++|++|+++.++ ..+.+.||||++++ +++|+|++.++|++++
T Consensus 489 ~~~~~~~~~i~sihD~gaGGls~al~Ema~~~g~G~~i~L~~vp~~~~~m~~~eil~sESQeR~vl~v~~~~~~~f~~i~ 568 (1310)
T TIGR01735 489 CWQLGEKNPIISIHDVGAGGLSNALPELIHDGGRGAVIDLRAVPLDDPGLSPLEIWCNESQERYVLLVRAENLEIFTAIC 568 (1310)
T ss_pred HHHcCCCCceEEEeccCccHHHHHHHHHHhcCCceEEEEcCCCcccCCCCCHHHHhhccccccEEEEECcccHHHHHHHH
Confidence 6554 5999999999999999999999999999999999863 46788899999997 8999999999999999
Q ss_pred HHcCCCEEEEEEEeCCCcEEEEEC---------------CEEEEeccHHHHH
Q 000572 1054 HDAGVSAEIIGQVNSSHSVEIKVD---------------GLTHLNEKTSLLR 1090 (1414)
Q Consensus 1054 ~~~gi~~~~IG~v~~~~~l~i~~~---------------g~~i~~~~~~~L~ 1090 (1414)
++.++++++||+||+++.+++..+ |+.+++++++-|.
T Consensus 569 ~~~~~~~~vIG~vt~~~~l~v~~~~~~~~~~~~~~~~~~~~~~vdl~~~~L~ 620 (1310)
T TIGR01735 569 ERERCPFAVVGTATGDGRLTLVDDTPVRRNGQGDAPSHFPNNPVDLPLEVLL 620 (1310)
T ss_pred HHcCCCEEEEEEECCCceEEEEecCcccccccccccccCCCeEEEeEHHHHc
Confidence 999999999999999888988874 6788899998774
|
This model represents a single-molecule form of phosphoribosylformylglycinamidine synthase, also called FGAM synthase, an enzyme of purine de novo biosynthesis. This form is found mostly in eukaryotes and Proteobacteria. In Bacillus subtilis PurL (FGAM synthase II) and PurQ (FGAM synthase I), homologous to different parts of this model, perform the equivalent function; the unrelated small protein PurS is also required and may be a third subunit. |
| >PRK00943 selenophosphate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-29 Score=293.38 Aligned_cols=265 Identities=15% Similarity=0.142 Sum_probs=192.0
Q ss_pred CCCceeee--ccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCC
Q 000572 353 PNNSVIGF--KDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGR 430 (1414)
Q Consensus 353 ~~~~~~g~--~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGr 430 (1414)
.+.+++|+ +|||||++..+ +..+++++++. +|...+||..|++++.+|+|||+||
T Consensus 39 ~~~v~~g~~~gdDaavi~~~~--------------------~~~lv~t~D~~-~p~~~~p~~~G~~Av~~~~sDiaAm-- 95 (347)
T PRK00943 39 DPNLLVGNETRDDAAVYDLND--------------------GTGIISTTDFF-MPIVDDPFDFGRIAATNAISDIYAM-- 95 (347)
T ss_pred CCCeeecCCCCCceEEEEeCC--------------------CcEEEEEcccC-CCCCCCHHHHHHHHHHHHhhHhhcc--
Confidence 35677776 59999997432 33455666653 6778899999999999999999999
Q ss_pred CceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccc
Q 000572 431 GSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRRE 510 (1414)
Q Consensus 431 GA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~ 510 (1414)
||+|+++++++.+ |... .+.++++++++|+.++|+++|++++||||..
T Consensus 96 Ga~P~~~l~~l~l-----p~~~---------------~~~~~l~~i~~Gi~~~~~~~gv~lvGGdT~~------------ 143 (347)
T PRK00943 96 GGKPIMAIAILGW-----PINK---------------LPPEVAREVLEGGRAACRQAGIPLAGGHSID------------ 143 (347)
T ss_pred CccHHhHhheeec-----Cccc---------------CcHHHHHHHHHHHHHHHHHcCCceecccccC------------
Confidence 9999999999875 3210 1356789999999999999999999999942
Q ss_pred cCCceEEEEEEEeeeCccc-ccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHH
Q 000572 511 WLKPIMFSGGIGQIDHNHI-SKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVV 589 (1414)
Q Consensus 511 ~~~Plv~~~~vG~v~~~~i-~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i 589 (1414)
...|++.++++|.++++++ .+++++|||.|+++| .+|+++.+.. ...+. +..... ....+...++.
T Consensus 144 ~~~~~i~~t~~G~~~~~~~l~~~~ak~GD~Iivtg----~iG~~~~~~~-~~~~~----~~~~~~----~~~~~~~~~l~ 210 (347)
T PRK00943 144 APEPIFGLAVTGVVPPERVKRNATAQAGDKLFLTK----PLGIGILTTA-EKKSK----LKPEHY----GLAIEAMCQLN 210 (347)
T ss_pred CCCceEEEEEEEEEcCCceeeCCCCCCCCEEEEeC----CccHHHHHHH-HHhcC----CCHHHH----HHHHHHHHHhh
Confidence 2356667799999988764 567799999999987 4666544322 11111 000000 00111112222
Q ss_pred HHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCCC--------------------------ccH
Q 000572 590 RACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHT--------------------------LSV 641 (1414)
Q Consensus 590 ~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~~--------------------------l~p 641 (1414)
+....+.....+++|||+|.|||..+|.|||+ ++|++||+++||+.+.. ++|
T Consensus 211 ~~~~~l~~~~~v~a~~DiT~gGL~~~L~ela~~s~~g~~Id~d~iPi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
T PRK00943 211 RPGADFAKLPGVHAMTDVTGFGLLGHLLEMCQGAGLTARVDYAAVPLLPGVEEYIAQGCVPGGTGRNFASYGHLIGELPD 290 (347)
T ss_pred hHHHHHhccCCCeEEEecCCchHHHHHHHHHHhcCCeEEEecccCCCChhHHHHHHcCCCCchhhhHHHHhhccccccCH
Confidence 22222333456899999999999999999997 99999999999987531 334
Q ss_pred HHHhc-c--cccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcC
Q 000572 642 LEIWG-A--EYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGE 685 (1414)
Q Consensus 642 ~ei~~-s--Esqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~ 685 (1414)
++.++ . .+...|+++|+|++.+++++.+++.++++++||+|+++
T Consensus 291 ~~~~~~~~~~~sgGll~~v~~~~a~~v~~~l~~~g~~a~vIG~V~~~ 337 (347)
T PRK00943 291 EQRALLCDPQTSGGLLVAVAPEAEAEVLAIAAEHGIELAAIGELVEA 337 (347)
T ss_pred HHHhhccCcccCccEEEEeCHHHHHHHHHHHHhcCCCeEEEEEEEcC
Confidence 44322 0 11234999999999999999999999999999999865
|
|
| >TIGR02124 hypE hydrogenase expression/formation protein HypE | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=286.09 Aligned_cols=271 Identities=18% Similarity=0.163 Sum_probs=190.0
Q ss_pred CcCcEEEEEecCCCceEeEEEEccC---CCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHH
Q 000572 790 TLADVAVIAQTYTDLTGGACAIGEQ---PIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAA 866 (1414)
Q Consensus 790 pg~DaAVi~~~~~~~~gla~s~g~~---p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~ 866 (1414)
+||||||++++. ..+++|+|.. |++ .+++..|++||+.|+|||+||||+|+. +.++++ .|.+. ..++
T Consensus 20 ~gdDaavi~~~~---~~lv~ttD~~~~~p~~--~~~~~iG~~av~~n~sDiaamGa~P~~-~~~~l~--lp~~~--~~~~ 89 (320)
T TIGR02124 20 AMEDAAVLELSG---GRLAFSTDSFVVDPLF--FPGGDIGKLAVCGTVNDVAVSGAKPLY-LSCGFI--LEEGF--PIED 89 (320)
T ss_pred CCCceEEEeeCC---CeEEEEecCCccCCcc--cCcccHHHHHHHHHHHHHHHcCCcchh-hEEEEE--cCCCC--CHHH
Confidence 579999998863 4699999954 222 133568999999999999999999976 445555 35432 2567
Q ss_pred HHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCcc
Q 000572 867 MYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKR 946 (1414)
Q Consensus 867 l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~ 946 (1414)
+.++++|+.++|++||++++||||++++... .+ .+.+.+|++|.+++. +.+++..+++|| +|++ +|. .+
T Consensus 90 l~~~~~Gi~~a~~~~gi~ivGGdt~~~~~~~-----~~-~~~i~~t~~G~~~~~-~~~~r~~a~~GD--~I~l-tg~-~G 158 (320)
T TIGR02124 90 LERIVKSMAEAARKAGVKIVTGDTKVVEKGK-----AD-GIFINTTGIGVIPSG-IPISAHNLQPGD--KIIV-SGT-IG 158 (320)
T ss_pred HHHHHHHHHHHHHHcCCEEEeeeeEEccCCC-----CC-cEEEEEEEEEEEcCC-ccccccCCCCCC--EEEE-eCC-cc
Confidence 8889999999999999999999999875321 11 246777999999865 478999999997 4565 232 22
Q ss_pred ccchHHHHHHhhhcCCCCCCCCChHHHHHHHHHHHHHHhcc-CceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCCCc
Q 000572 947 RLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDE-LVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNS 1025 (1414)
Q Consensus 947 ~LGGS~la~~~~~~~~~~p~v~d~~~lk~~~~~v~~l~~~g-~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~~~ 1025 (1414)
..|++.++. .+... .+.. -....+.+...+..+...+ .++||||+|||||+.+|+|||.++++|++|+++.++..
T Consensus 159 ~~g~~l~~~-~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~v~a~~DiSdgGL~~~L~ela~~s~~g~~I~~~~ipi~ 234 (320)
T TIGR02124 159 DHGAAILAV-REGLG--FETN-LESDCAPLNGLVETLLNAGPAVHAMRDATRGGLAAVLNEWAQASGVGIVIEEEKIPVK 234 (320)
T ss_pred HHHHHHHHh-hcccC--CCcc-chhhhhhhHHHHHHHHhccCCceEEECCCCccHHHHHHHHHHHcCCeEEEecccCCCC
Confidence 222222221 11111 1110 0112233344455555554 69999999999999999999999999999999886522
Q ss_pred h----H------HHhcccccc-eEEEEecCCHHHHHHHHHH--cCCCEEEEEEEeCCCc--EEEEE--CCEEEEecc
Q 000572 1026 L----F------QTLFAEELG-LVLEVSKSNLDTVSKKLHD--AGVSAEIIGQVNSSHS--VEIKV--DGLTHLNEK 1085 (1414)
Q Consensus 1026 ~----~------~~LFsE~~G-~vl~V~~~~~~~v~~~l~~--~gi~~~~IG~v~~~~~--l~i~~--~g~~i~~~~ 1085 (1414)
+ . ..++.+++| +|++|++++.+++++.+++ .|+++++||+|++++. +.+.. +++..++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~G~ll~~v~~~~~~~~~~~~~~~~~gi~~~~IG~v~~~~~~~v~~~~~~~~~~~l~~~ 311 (320)
T TIGR02124 235 EEVKGACELLGLDPLYLANEGKLVLAVPPEAAEKVLEILKSHPYGKDAAIIGEVVERKEGRVVLKTAYGGKRILDMP 311 (320)
T ss_pred HHHHHHHHHhCCCHHHHhcCCcEEEEECHHHHHHHHHHHHhCCCCCCEEEEEEEEcCCCCEEEEEecCCCEEECCCC
Confidence 1 0 124445666 6899999999999999998 6899999999998765 66653 344444433
|
This family contains HypE (or HupE), a protein required for expression of catalytically active hydrogenase in many systems. It appears to be an accessory protein involved in maturation rather than a regulatory protein involved in expression. HypE shows considerable homology to the thiamine-monophosphate kinase ThiL (TIGR01379) and other enzymes. |
| >COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-29 Score=279.10 Aligned_cols=307 Identities=18% Similarity=0.216 Sum_probs=214.0
Q ss_pred chhHHH-HHHHHhccCCCCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcH-HHHh
Q 000572 338 VRTLMQ-IVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPY-PGAE 415 (1414)
Q Consensus 338 ~~~lf~-~I~~~~~~~~~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~-~gA~ 415 (1414)
+..+|+ +|-+++..+...+....+||++.+. ++++ .++|+.+.|-.-...=|- ..|+
T Consensus 14 ~~~li~~~il~~~~~~~~~v~~~~g~D~~~i~--------------------l~~~-~la~tTD~~~i~P~ff~~~diG~ 72 (339)
T COG0309 14 MQELINKVILPNFGRRDVNVGLANGEDAAIID--------------------LGDG-VLAFTTDPFVIDPLFFPGGDIGK 72 (339)
T ss_pred HHHHHHHHHHhccCccccccCcccccceeeee--------------------cCCc-eEEEEeCCeEecccccCCCceEE
Confidence 334443 3444443111234444667777765 3333 566666665421111111 2578
Q ss_pred hcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeee
Q 000572 416 TGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGY 495 (1414)
Q Consensus 416 t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~ 495 (1414)
-++.+++||++.| ||+|+|++.+|.+ |+. .+.+.++++++.|.+.|+++|+++|+||
T Consensus 73 lAV~gt~NDlav~--GA~P~~l~~~lil-----~eg----------------~~~e~l~~i~~si~e~a~~~Gv~IvtGd 129 (339)
T COG0309 73 LAVHGTANDVAVS--GAKPRYLSVGLIL-----PEG----------------LPIEDLERILKSIDEEAEEAGVSIVTGD 129 (339)
T ss_pred EEEEEehhhhhhc--CCCceeeeEeEec-----CCC----------------CCHHHHHHHHHHHHHHHHHcCCeEEccC
Confidence 8899999999999 9999999999974 432 2577899999999999999999999999
Q ss_pred eEEeccccCCCCccccCCceEEEEEEEeeeCcc-cccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccc
Q 000572 496 TRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNH-ISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAV 574 (1414)
Q Consensus 496 t~s~~~~~~~g~~~~~~~Plv~~~~vG~v~~~~-i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~V 574 (1414)
|..++. ...+++++++++|.+.+.. +..+++||||.|+++|+ +|.||++......+. +++ ..+
T Consensus 130 TkV~~~--------~~~~~vi~tt~iG~~~~~~~v~~~~~~~GD~vI~tg~----~g~hga~ila~~~~~---~l~-~~l 193 (339)
T COG0309 130 TKVVPG--------GKDPIVINTTGIGIIDKEILVSPSGARPGDAVIVTGT----IGIHGASILAHRFGE---ELE-TEL 193 (339)
T ss_pred ceeecC--------CCCCcEEEeeeEEeecCCcccccCCCCCCCEEEEcCC----hhHHHHHHHHHhcch---hhc-cch
Confidence 976532 1234455679999998876 45567999999999885 789999865443332 111 001
Q ss_pred cCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCC--------CccHHHH
Q 000572 575 QRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDH--------TLSVLEI 644 (1414)
Q Consensus 575 q~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~--------~l~p~ei 644 (1414)
........+.+++.+..+.+.... .++||||.|+|||+++|.|||+ ++|+.|+.++||++++ +++||++
T Consensus 194 ~sD~~~~~~~~~~~l~~~~~~~~~-~vtAMhDaTrGGla~aLnEmA~aSgvgi~I~ee~Ipv~~eVr~vce~lGiDPl~~ 272 (339)
T COG0309 194 GSDCAPLAKLVKALLSVVGEALAA-AVTAMHDATRGGLAGALNEMAEASGVGISIEEEKIPVREEVRGVCELLGLDPLEL 272 (339)
T ss_pred hhhHHHHHHHHHHHhhcchhhhhh-hhhhccCCchhHHHHHHHHHHHHcCCeEEEeeccccccHHHHHHHHHhCCCHHHh
Confidence 111111122222223222221111 1889999999999999999999 9999999999999987 7888876
Q ss_pred hcccccceeEEEEcCCCHHHHHHHHHHcC-CCeEEEEEEEcCCe-EEEEeCcccccccCCCCCCCCCeEEcchhhhh
Q 000572 645 WGAEYQEQDAVLVKPESRDLLQSICERER-VSMAVIGTISGEGR-VVLVDSAAVQKCQSSGLPPPPPAVDLELERVL 719 (1414)
Q Consensus 645 ~~sEsqer~ll~V~pe~~~~l~~i~~~~~-~~~~vIG~vt~~~~-l~l~~~~~~~~~~~~~~~~~~~~~dl~~~~l~ 719 (1414)
. || +.++++|+|++.+++++++++++ .++++||+|++++. +.+... .+++++++.|..+.+
T Consensus 273 a-nE--G~lv~~V~~~~a~~~l~~L~~~~~~~A~iIGeV~~~~~~v~l~~~-----------~G~~r~l~~P~~Dpl 335 (339)
T COG0309 273 A-NE--GKLVIAVPPEHAEEVLEALRSHGLKDAAIIGEVVEEKGGVGLETA-----------GGGKRILEPPEGDPL 335 (339)
T ss_pred h-cC--ceEEEEECHHHHHHHHHHHHhcCCccceeEEEEeccCCcEEEEec-----------CCceEecCCCCcCcC
Confidence 5 33 46999999999999999999999 89999999998754 666553 145788888877643
|
|
| >COG2144 Selenophosphate synthetase-related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=266.25 Aligned_cols=281 Identities=19% Similarity=0.193 Sum_probs=211.4
Q ss_pred CCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEeccc-CCCCCCCcHHHHhhcccccccchhccCCCc
Q 000572 354 NNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETH-NFPCAVAPYPGAETGAGGRIRDTHATGRGS 432 (1414)
Q Consensus 354 ~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEth-n~p~~idP~~gA~t~vgg~irDiaAmGrGA 432 (1414)
..+.+.+|||||||+... + .+++.+|+- ...-.-|||..+++.+-+|++||+|| |+
T Consensus 36 ~~~~l~~GDDAavI~v~~--------------------~-~lliaadGi~g~l~~~dPw~aG~csvLVn~~DV~am--GG 92 (324)
T COG2144 36 AEVILDFGDDAAVIRVGD--------------------G-KLLIAADGIWGKLIDADPWWAGYCSVLVNVNDVAAM--GG 92 (324)
T ss_pred cccccccCCceEEEeeCC--------------------c-EEEEecCCccccccccCchhhhceeEEEeehhhhhh--CC
Confidence 467888999999998431 2 233445542 23345689999999999999999999 99
Q ss_pred eeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccC
Q 000572 433 FVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWL 512 (1414)
Q Consensus 433 ~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~ 512 (1414)
+|+++++.+.. +..++.+++.+|+++.+.+||||++||||... ..
T Consensus 93 ~Pv~~vd~isa------------------------~s~d~~~ei~eglr~~a~kfgvpivGGhthpd-----------~~ 137 (324)
T COG2144 93 EPVGAVDAISA------------------------KSEDQAREILEGLRKGARKFGVPIVGGHTHPD-----------TP 137 (324)
T ss_pred cceEEEEeeec------------------------CCHHHHHHHHHHHHHHHHhcCCceecCccCCC-----------CC
Confidence 99999999952 24678899999999999999999999999521 23
Q ss_pred CceEEEEEEEeeeCcccccC-CCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHH
Q 000572 513 KPIMFSGGIGQIDHNHISKG-EPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRA 591 (1414)
Q Consensus 513 ~Plv~~~~vG~v~~~~i~r~-~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~ 591 (1414)
.+.+.+...|.+.++.+.++ +|+|||+|+++|...|+++-. .-.. -+... ...+ ++++..++.
T Consensus 138 y~vl~v~i~gl~~~e~Ii~s~~Ak~GD~lI~~~d~~g~~~p~------~P~~-----wDttt--~ka~---~~~~~~~e~ 201 (324)
T COG2144 138 YCVLDVVIGGLIAEEPIITSGTAKPGDLLIFVGDLDGKPYPN------FPLN-----WDTTT--MKAK---EKFRAQLEL 201 (324)
T ss_pred CceeeeEEecccccccccccCCCCcCCEEEEEeccCCCcCCC------CCcc-----cccee--eccH---HHHHHHHHH
Confidence 34455667788888888765 599999999999754543211 0000 01100 0011 233444555
Q ss_pred HHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCCCccHHHHhcccccc-eeEEEEcCCCHHHHHHH
Q 000572 592 CIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQE-QDAVLVKPESRDLLQSI 668 (1414)
Q Consensus 592 ~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~~l~p~ei~~sEsqe-r~ll~V~pe~~~~l~~i 668 (1414)
..+.++ +++|++|+|.||+.++|.+|++ .+|+.+||++||.... ++ ++.|+.-+.+ .|+++|+|++.+++.++
T Consensus 202 l~e~a~--l~~AgKDvS~gG~iGtl~mlle~S~~ga~vdl~siP~p~~-vd-~~~wlk~ypg~gfv~~v~pe~veev~~v 277 (324)
T COG2144 202 LREGAK--LVKAGKDVSNGGLLGTLLMLLEKSRVGAGVDLDSIPYPAD-VD-FRQWLKRYPGSGFVLTVDPEDVEEVVDV 277 (324)
T ss_pred HHHHHH--HHhhcccccCccHHHHHHHHHHhhccCceeeecccCCccc-cc-HHHHHHhCCCCcEEEEeCHHHHHHHHHH
Confidence 555444 7899999999999999999999 7899999999998754 43 4566666666 69999999999999999
Q ss_pred HHHcCCCeEEEEEEEcCCeEEEEeCcccccccCCCCCCCCCeEEcchhhhhCCCC
Q 000572 669 CERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMP 723 (1414)
Q Consensus 669 ~~~~~~~~~vIG~vt~~~~l~l~~~~~~~~~~~~~~~~~~~~~dl~~~~l~~~~p 723 (1414)
|.++||++++||+|++++++++..+. ....++|+..+.+++-.|
T Consensus 278 ~~~~g~~a~~~GeVie~~~L~i~~~~-----------~~~~~~d~e~~~i~g~~~ 321 (324)
T COG2144 278 FEEEGCPATVIGEVIEEPVLRIGDGE-----------LVSEVFDLEKERITGYKP 321 (324)
T ss_pred HHHcCCceEEEEEeccCceEEEecCc-----------hhhhhhhhhhccccCcCC
Confidence 99999999999999999999998752 345678888888776544
|
|
| >TIGR00878 purM phosphoribosylaminoimidazole synthetase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-29 Score=291.34 Aligned_cols=293 Identities=14% Similarity=0.092 Sum_probs=197.1
Q ss_pred hHHHHHHHHhcc----CCCCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecc---cCCCC-CCCcH
Q 000572 340 TLMQIVKSTLQA----NPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAET---HNFPC-AVAPY 411 (1414)
Q Consensus 340 ~lf~~I~~~~~~----~~~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEt---hn~p~-~idP~ 411 (1414)
.||++|++.++. ..+.+..|+||||||++..+.. ++..+++++++ |.+.. ..+|+
T Consensus 12 ~e~~li~~~~~~~~~~~~~~v~~g~GdDaav~~~~~~~-----------------~~~~l~~t~D~~g~~~~~~~~~~~~ 74 (332)
T TIGR00878 12 AGNEAVKRIKSLVKKTRRPEVMGGLGGFAGLFDLGDKY-----------------KEPVLVSGTDGVGTKLLVAEAMNKH 74 (332)
T ss_pred HHHHHHHHHHHHHHhhCCCCcccCCCCCeEEEEccccc-----------------CCceEEEeccccccchHHHHHcCch
Confidence 467777755442 2357788999999999843210 00234444443 33332 46776
Q ss_pred H-HHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCe
Q 000572 412 P-GAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEP 490 (1414)
Q Consensus 412 ~-gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~Gvp 490 (1414)
. .|++++..|+|||+|| ||+|++++++++++++ +.+++.++++|+.++|+++|+|
T Consensus 75 ~~~G~~av~~n~sDiaa~--Ga~P~~~~~~l~~~~~----------------------~~~~~~~i~~Gi~~a~~~~g~~ 130 (332)
T TIGR00878 75 DTIGIDLVAMNVNDLLVQ--GAEPLFFLDYLAVGKL----------------------DPEVASQIVKGIAEGCKQAGCA 130 (332)
T ss_pred HHHHHHHHHHHHHHHHHc--CCcHHHHHHHHhcCCC----------------------CHHHHHHHHHHHHHHHHHcCCE
Confidence 6 9999999999999999 9999999999976442 1346799999999999999999
Q ss_pred eeeeeeEEeccccCCCCccccCCceEEEEEEEeeeCccc-ccCCCCCCCEEEEEccCCCcccccHHH--HHHhhhCCCCC
Q 000572 491 LIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHI-SKGEPDIGMLVVKIGGPAYRIGMGGGA--ASSMVSGQNDA 567 (1414)
Q Consensus 491 lvgG~t~s~~~~~~~g~~~~~~~Plv~~~~vG~v~~~~i-~r~~a~~GD~Ivv~G~~~g~~GlgGaa--~ss~~~~~~~~ 567 (1414)
++||||... ....++ ....+.++++|.+++.++ .+++++|||.|+++|. .|+++++ +.+.......
T Consensus 131 ivGG~t~~~-~~~~~~-----~~~~i~~t~iG~~~~~~~~~~~~a~~GD~i~ltg~----~G~~~~g~~~~~~~~~~~~- 199 (332)
T TIGR00878 131 LVGGETAEM-PGMYRG-----GHYDLAGTAVGVVEKDEIITGEKVKPGDVLIGLGS----SGIHSNGLSLVRKVLEDIA- 199 (332)
T ss_pred EEceeeeEC-CCcccC-----CceEEEEEEEEEEcCccccCccCCCCCCEEEEECC----chHHHHHHHHHHHHhhhcc-
Confidence 999999632 111000 012345689999987664 5667999999999985 5566543 2222211100
Q ss_pred ccccc-ccc-CCCHHHHHHH---HHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc-CCeEEEEeCCCCCCCC----
Q 000572 568 DLDFN-AVQ-RGDAEMAQKL---YRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY-PKGAEIDIRAIIVGDH---- 637 (1414)
Q Consensus 568 ~~~~~-~Vq-~~~p~~e~~l---~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~-~~Ga~Idl~~iP~~~~---- 637 (1414)
....+ ..+ ..++..++.+ .++++...++.+.+.+++|||+|.|||+.+|.||+. ++|++|+++++|+.+.
T Consensus 200 ~~~~~~~~~~~~~~l~~~~l~p~~~~~~~~~~l~~~~~i~a~~DiS~gGL~~~L~e~~~sg~g~~I~~~~ipi~~~~~~~ 279 (332)
T TIGR00878 200 GLDYEDTPEDFGKTLGEELLEPTRIYVKPILELIKEVEVHGLAHITGGGLLENIPRRLPDGLKAVIDMSSWPQPPIFKWI 279 (332)
T ss_pred ccccccccccccchHHHHHhhHhHHHHHHHHHHHhcCCceEEEeCCCccHhhhHHHhccCCceEEEecCCCCCCHHHHHH
Confidence 00000 001 1122222221 112233445556678999999999999999999987 9999999999998642
Q ss_pred ----CccHHHHhccc-ccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEc
Q 000572 638 ----TLSVLEIWGAE-YQEQDAVLVKPESRDLLQSICERERVSMAVIGTISG 684 (1414)
Q Consensus 638 ----~l~p~ei~~sE-sqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~ 684 (1414)
.++|.+.+-.- +..+|+++|+|++.+++.+.+++.++++++||+|++
T Consensus 280 ~e~~~~~~~e~~~~~~~g~glli~v~~e~~~~~~~~l~~~gi~a~vIG~V~~ 331 (332)
T TIGR00878 280 QEAGNVEEEEMYRTFNMGVGFVVIVPEEEVDKALALLNARGEKAWVIGEVKK 331 (332)
T ss_pred HHCCCCChHHHHHHHhccCCEEEEECHHHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 23332221111 124699999999999999999999999999999975
|
This enzyme is found as a homodimeric monofunctional protein in prokaryotes and as part of a larger, multifunctional protein, sometimes with two copies of this enzyme in tandem, in eukaryotes. |
| >cd02192 PurM-like3 AIR synthase (PurM) related protein, subgroup 3 of unknown function | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=280.38 Aligned_cols=243 Identities=17% Similarity=0.131 Sum_probs=184.8
Q ss_pred CcCcEEEEEecCCCceEeEEEEcc-CCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHHH
Q 000572 790 TLADVAVIAQTYTDLTGGACAIGE-QPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMY 868 (1414)
Q Consensus 790 pg~DaAVi~~~~~~~~gla~s~g~-~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~ 868 (1414)
+|+||||++... ..+++|+|. ++.+...|||.+|++||++|+|||+||||+|+. +..++++ |. .+++.
T Consensus 34 ~GdDaavi~~~~---~~lvit~D~~~~~~~~~~p~~~G~~av~~~vsDiaa~Ga~P~~-~~~~l~~--p~-----~e~l~ 102 (283)
T cd02192 34 LGDDAAAIPDGD---GYLLLAADGIWPSLVEADPWWAGYCSVLVNVSDIAAMGGRPLA-MVDALWS--PS-----AEAAA 102 (283)
T ss_pred CCCCEEEEecCC---cEEEEEecccccccccCCHHHHHHHHHHHHHHHHHhcCCEeee-eeeeecC--CC-----HHHHH
Confidence 579999996542 579999997 454666799999999999999999999999975 5555553 42 36788
Q ss_pred HHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCcccc
Q 000572 869 DAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRL 948 (1414)
Q Consensus 869 ~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~L 948 (1414)
++++|+.++|+++|++++||||+.++ ..+++.+|++|.+++ .+.+ +..+++|| +|++ ++...+.+
T Consensus 103 ~i~~Gi~~a~~~~gi~ivGGdt~~~~----------~~~~i~vt~iG~~~~-~~~~-r~~a~~GD--~I~v-tg~l~g~~ 167 (283)
T cd02192 103 QVLEGMRDAAEKFGVPIVGGHTHPDS----------PYNALSVAILGRARK-DLLI-SFGAKPGD--RLIL-AIDLDGRV 167 (283)
T ss_pred HHHHHHHHHHHHcCCcEecccCCCCC----------CCCeEEEEEEEEEcC-Cccc-cCCCCCCC--EEEE-EeCCCCcc
Confidence 89999999999999999999997542 135888999999986 3455 78889997 4455 22211222
Q ss_pred -chHHHHHHhhhcCCCCCCCCChHHHHHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCCCch-
Q 000572 949 -GGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSL- 1026 (1414)
Q Consensus 949 -GGS~la~~~~~~~~~~p~v~d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~~~~- 1026 (1414)
|.+.+ ..+ ..+.. +.+.++..++.++++...+.++||||+|||||+.+|+|||.+|++|++|+++.++..+
T Consensus 168 ~g~~~~-----~~~-~~~~~-~~~~~~~~~~~~~~l~~~~~v~a~~DiSdGGL~~~L~ela~~sg~G~~Id~~~ip~~~~ 240 (283)
T cd02192 168 HPSPPP-----NWD-ATTMK-SPALLRRQIALLPELAERGLVHAAKDISNPGIIGTLGMLLEASGVGAEIDLDAIPRPEG 240 (283)
T ss_pred cccccc-----Ccc-ccccC-CHHHHHHHHHHHHHHHHcCCCceeecCCCCcHHHHHHHHHHhcCCcEEEecccCCCCCC
Confidence 22111 011 11112 3456677778888888888899999999999999999999999999999998764211
Q ss_pred ---HHHhcc-cccceEEEEecCCHHHHHHHHHHcCCCEEEEEE
Q 000572 1027 ---FQTLFA-EELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQ 1065 (1414)
Q Consensus 1027 ---~~~LFs-E~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~ 1065 (1414)
...++. .++|+|++|++++.+++++.+++.|+++++||+
T Consensus 241 ~~~~~~l~~~~~~~ll~~v~~~~~~~v~~~l~~~gi~~~~IG~ 283 (283)
T cd02192 241 VDLERWLKCFPGFGFLLTARPENADEVVAVFAAVGITAAVIGE 283 (283)
T ss_pred CChHHHHHhCCCCceEEEECHHhHHHHHHHHHHcCCcEEEeCC
Confidence 223332 356789999999999999999999999999995
|
The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain. |
| >cd02204 PurL_repeat2 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=280.73 Aligned_cols=249 Identities=25% Similarity=0.302 Sum_probs=188.4
Q ss_pred ceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHH
Q 000572 392 DLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQ 471 (1414)
Q Consensus 392 ~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~ 471 (1414)
+..++++++.|+..+..+||.+|++++.+++|||++| ||+|++++++++++.+..++ ...+
T Consensus 12 ~~~~~~t~d~~~~~~~~~p~~~g~~av~~~~sDiaa~--Ga~P~~~~~~l~~~~~~~~~-----------------~~~~ 72 (264)
T cd02204 12 DKGLAMSTGENPRYSLLDPYAGAALAVAEAVRNLVAV--GADPLAITDCLNFGNPEKPE-----------------GEMG 72 (264)
T ss_pred CeEEEEEcCCCCceeeeCHHHHHHHHHHHHHHHHhhh--CCchHheeeceeccCCCCCc-----------------chHH
Confidence 4567788898888888999999999999999999999 99999999999885532110 0234
Q ss_pred HHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCCceEEEEEEEeeeCcc-ccc-CCCCCCCEEEEEccCCCc
Q 000572 472 ILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNH-ISK-GEPDIGMLVVKIGGPAYR 549 (1414)
Q Consensus 472 i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~Plv~~~~vG~v~~~~-i~r-~~a~~GD~Ivv~G~~~g~ 549 (1414)
.+.++++|+.++|+++|+|++||||. +++...+ ....|.+.++++|.+++.+ +.+ ..++|||.|+++|...+.
T Consensus 73 ~l~~~~~g~~~~~~~~gv~ivGG~t~-~~~~~~~----~~~~~~~~~t~~G~~~~~~~~~~~~~a~~Gd~i~~~g~~g~~ 147 (264)
T cd02204 73 QLVEAVLGLGDACRALGTPVIGGKDS-LYNETEG----VAIPPTLVIGAVGVVDDVRKIVTLDFKKEGDLLYLIGETKDE 147 (264)
T ss_pred HHHHHHHHHHHHHHHhCCCcccceeC-CccCCCC----cccCCcCeEEEEEEccChhhccCcccCCCCCEEEEECCCCCC
Confidence 67899999999999999999999994 4332210 1234777889999988764 445 679999999999964332
Q ss_pred ccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEE
Q 000572 550 IGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEI 627 (1414)
Q Consensus 550 ~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~I 627 (1414)
.+.++... ...+. ....++..++...+++ ++...++.+.+.|+||||+|.|||..+|.||+. ++|++|
T Consensus 148 ~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~l~~~~~i~a~~DiSdGGL~~~l~ema~~s~~G~~i 217 (264)
T cd02204 148 LGGSEYAL--AYHGL-----GGGAPPLVDLEREKAL---FDAVQELIKEGLVLSAHDVSDGGLAVALAEMAFAGGLGAEV 217 (264)
T ss_pred CCCcHHHH--HhcCC-----CCCCCCCCCHHHHHHH---HHHHHHHHhCCCEEEEeeccccHHHHHHHHHHhcCCceEEE
Confidence 22122211 11111 1112333455544444 334444556778999999999999999999998 899999
Q ss_pred EeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEE
Q 000572 628 DIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTI 682 (1414)
Q Consensus 628 dl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~v 682 (1414)
+++++|+.+ +.|++|++++++++++++..+.+. +++.++++++||+|
T Consensus 218 ~~~~i~~~~------~~l~~e~~g~ll~~~~~~~~~~~~--~~~~~i~~~~IG~v 264 (264)
T cd02204 218 DLSKDDAED------ELLFSESLGRVLVEVKPENEEVFE--AEEAGVPATVIGTV 264 (264)
T ss_pred EcCCCCccc------ceeecCCCCeEEEEEChhHHHHHH--HHhCCCCeEEeecC
Confidence 999999875 567899999999999999988887 88899999999985
|
FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM. |
| >cd02195 SelD Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=284.29 Aligned_cols=249 Identities=18% Similarity=0.134 Sum_probs=184.2
Q ss_pred ceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeE
Q 000572 356 SVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVV 435 (1414)
Q Consensus 356 ~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~ 435 (1414)
+..+++|||||++.+ ++..++++++ |++|...+||.+|+++++.|+||++|| ||+|+
T Consensus 36 ~~~~~gdDaavi~~~--------------------~~~~lv~stD-~~~~~~~~p~~~G~~av~~~~sDiaa~--Ga~P~ 92 (287)
T cd02195 36 VGLGTGDDAAVYRLP--------------------GGLALVQTTD-FFPPIVDDPYLFGRIAAANALSDIYAM--GAKPL 92 (287)
T ss_pred ecCCCCCcEEEEEeC--------------------CCcEEEEEec-CCCCCCCCHHHHHHHHHHHHHHHHHhc--CchHH
Confidence 355688999999732 1234556666 666766899999999999999999999 99999
Q ss_pred EEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCCce
Q 000572 436 ASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPI 515 (1414)
Q Consensus 436 a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~Pl 515 (1414)
++++++++++...| ...+.+.++++|+.++|++||+|++||||. + .+.|.
T Consensus 93 ~~~~~l~lp~~~~~------------------~~~~~l~~~~~Gi~~~~~~~g~~ivGGdt~-~-----------~~~~~ 142 (287)
T cd02195 93 SALAIVTLPRKLPA------------------LQEEVLREILAGGKDKLREAGAVLVGGHTI-E-----------GPEPK 142 (287)
T ss_pred HHHHHhcCCCccch------------------hhHHHHHHHHHHHHHHHHHcCCcEEeeeec-c-----------CCCcE
Confidence 99999987542111 246789999999999999999999999994 2 23577
Q ss_pred EEEEEEEeeeCccc-ccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHH
Q 000572 516 MFSGGIGQIDHNHI-SKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIE 594 (1414)
Q Consensus 516 v~~~~vG~v~~~~i-~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~ 594 (1414)
+.++++|.++++++ .++++++||.|+++|. +|.+ ..+.....+.. .... . +...+.+.+......+
T Consensus 143 i~~t~~G~~~~~~~~~~~~a~~GD~I~ltg~----lG~~-~~~~~~~~~~~-----~~~~--~-~~~~~~~~~~~~~~~~ 209 (287)
T cd02195 143 YGLSVTGLVHPNKILRNSGAKPGDVLILTKP----LGTG-ILFAAEMAGLA-----RGED--I-DAALESMARLNRAAAE 209 (287)
T ss_pred EEEEEEEEEcchheecCCCCCCCCEEEEcCC----chHH-HHHHHHHhccC-----ChHH--H-HHHHHHHHhhhHHHHH
Confidence 77799999987664 5677999999999774 4432 11112211110 0000 0 1111111221112223
Q ss_pred hhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHc
Q 000572 595 MGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERE 672 (1414)
Q Consensus 595 l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~ 672 (1414)
+..++.+++|||+|.|||..+|.||++ ++|++||+++||+. +++++++++++|++.+++.+++++.
T Consensus 210 ~~~~~~v~a~~DiS~gGL~~~L~~~a~~sg~g~~Id~~~ip~~------------~~~Ggll~~v~~e~~~~~~~~~~~~ 277 (287)
T cd02195 210 LLRKYGAHACTDVTGFGLLGHLLEMARASGVSAEIDLDKLPLL------------QTSGGLLAAVPPEDAAALLALLKAG 277 (287)
T ss_pred HHHhcCCeEeEecCCcHHHHHHHHHHhhcCCeEEEEeCCCceE------------eccCceEEEEcHHHHHHHHHHHHhC
Confidence 334457999999999999999999998 89999999999975 4556799999999999999999999
Q ss_pred CCCeEEEEEE
Q 000572 673 RVSMAVIGTI 682 (1414)
Q Consensus 673 ~~~~~vIG~v 682 (1414)
++++++||+|
T Consensus 278 g~~~~~IG~v 287 (287)
T cd02195 278 GPPAAIIGEV 287 (287)
T ss_pred CCCeEEEEEC
Confidence 9999999985
|
The N-terminal domain of SelD is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, and FGAM synthase and is thought to bind ATP. |
| >PRK05385 phosphoribosylaminoimidazole synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=290.30 Aligned_cols=290 Identities=13% Similarity=0.036 Sum_probs=196.2
Q ss_pred HHHHHH---HHhcc-CCCCceeeeccCcceeecCC---cccccccCCCCCccccccCCceEEEEEecc-cCCCCCCCcHH
Q 000572 341 LMQIVK---STLQA-NPNNSVIGFKDNSSAIKGFP---VKQLRPVQPGSRCQLSESSQDLDVLFTAET-HNFPCAVAPYP 412 (1414)
Q Consensus 341 lf~~I~---~~~~~-~~~~~~~g~~Ddaavi~~~~---~~~~~~~~~g~~~~~~~~~~~~~i~~~vEt-hn~p~~idP~~ 412 (1414)
.|++|+ +.++. ..+.++.|+||||||++.++ +..++.++ | ..+|. |.++....|+.
T Consensus 13 ~~~~i~~~~~~~~~~~~~~v~~giGdDaav~~~~~~~~~~~lv~t~-----------D-----~~~~~~~~~~~~~~~~~ 76 (327)
T PRK05385 13 GNELVERIKPAVKRTFRPEVLGGLGGFGGLFDLPKGYKEPVLVSGT-----------D-----GVGTKLKLAIDLGKHDT 76 (327)
T ss_pred HHHHHHHHHHHHHhcCCCccccCCcCccEEEecccccCCcceeecc-----------c-----cccchhHHHHHhCCHhh
Confidence 344444 44432 34677889999999998543 12233321 1 12222 33343346899
Q ss_pred HHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeee
Q 000572 413 GAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLI 492 (1414)
Q Consensus 413 gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~Gvplv 492 (1414)
.|+++++.|+|||+|| ||+|++++++++++++ ..+.+.++++|+.+.|+++|+|++
T Consensus 77 iG~~av~~n~sDIaam--Ga~P~~~~~~l~~~~~----------------------~~~~~~~~~~Gi~~~~~~~g~~iv 132 (327)
T PRK05385 77 IGIDLVAMCVNDLLVQ--GAEPLFFLDYIATGKL----------------------DPEVAAQVVKGIAEGCEQAGCALI 132 (327)
T ss_pred HHHHHHHHHHHHHHHc--CCCHHHHHHHHhcCCC----------------------CHHHHHHHHHHHHHHHHHcCCeEe
Confidence 9999999999999999 9999999999976331 134678999999999999999999
Q ss_pred eeeeEEeccccCCCCcccc--CCceEEEEEEEeeeCcc-cccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCcc
Q 000572 493 QGYTRTFGMRLPSGQRREW--LKPIMFSGGIGQIDHNH-ISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADL 569 (1414)
Q Consensus 493 gG~t~s~~~~~~~g~~~~~--~~Plv~~~~vG~v~~~~-i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~ 569 (1414)
||||.... . .+ ..+.+.++++|.+++.+ +.|++++|||.|+++|. +|..|.+ .++............
T Consensus 133 GGdt~~~~-~-------~~~~~~~~i~~t~~G~~~~~~~~~r~~a~~GD~I~~tg~-~G~~g~g-~~~l~~~~~~~~~~~ 202 (327)
T PRK05385 133 GGETAEMP-G-------MYHEGDYDLAGFAVGVVEKDKIIDGSKVKEGDVLIGLAS-SGLHSNG-YSLVRKILEVLDLDD 202 (327)
T ss_pred CccceECC-C-------cccCCCeeEEEEEEEEEecccccCcCCCCCCCEEEEeCC-cchhhhH-HHHHHHHHHhccccc
Confidence 99995321 0 01 23555669999998765 56778999999999985 4433222 121212111100000
Q ss_pred ccccccCCCHHHHHHH---HHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc-CCeEEEEeCCCCCCCC--------
Q 000572 570 DFNAVQRGDAEMAQKL---YRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY-PKGAEIDIRAIIVGDH-------- 637 (1414)
Q Consensus 570 ~~~~Vq~~~p~~e~~l---~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~-~~Ga~Idl~~iP~~~~-------- 637 (1414)
+ .....+....+..+ .++.+....+.+.+.+++|||+|.|||+.+|.||+. ++|++||+++||+.+.
T Consensus 203 ~-~~~~~~~~~~~~~l~p~~~~~~~~~~l~~~~~v~a~~DiSdgGL~~~L~eia~sgvg~~Id~~~iP~~~~~~~~~~~~ 281 (327)
T PRK05385 203 T-LPELDGKTLGEELLEPTRIYVKPVLALLKEVDVKGMAHITGGGFIENLPRVLPEGLGAEIDKGSWPVPPIFKWLQKLG 281 (327)
T ss_pred c-ccccccchHHHHHhhhhHHHHHHHHHHHhcCCceEEEeCCCchHhhhhHHhcCCCceEEEecCCCCCCHHHHHHHHcC
Confidence 0 00011111122111 111233344455667999999999999999999986 8999999999998753
Q ss_pred CccHHHH--hcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEE
Q 000572 638 TLSVLEI--WGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTI 682 (1414)
Q Consensus 638 ~l~p~ei--~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~v 682 (1414)
+++|.++ +++++ ..|+++++|++.+++.+.+++.|+++++||+|
T Consensus 282 ~~~~~~~~~~~~~G-~~Ll~tv~~~~~~~l~~~l~~~g~~~~~IG~v 327 (327)
T PRK05385 282 NVEEEEMYRTFNMG-IGMVLIVPPEDADAALALLEAAGEDAWVIGRV 327 (327)
T ss_pred CCCHHHHHHHHhcC-CcEEEEECHHHHHHHHHHHHhcCCCceEEEEC
Confidence 4667665 55654 35999999999999999999999999999986
|
|
| >cd02197 HypE HypE (Hydrogenase expression/formation protein) | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-28 Score=280.12 Aligned_cols=253 Identities=18% Similarity=0.138 Sum_probs=179.8
Q ss_pred CCcCcEEEEEecCCCceEeEEEEccC---CCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHH
Q 000572 789 ITLADVAVIAQTYTDLTGGACAIGEQ---PIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGA 865 (1414)
Q Consensus 789 ~pg~DaAVi~~~~~~~~gla~s~g~~---p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~ 865 (1414)
.++|||||+++.+ ..+++|+|.. |++ .+++..||+||++|+|||+||||+|+. +.+++++ |... +.+
T Consensus 24 ~~~DDaavi~~~~---~~lv~ttD~~~~~~~~--~~~~~iG~~av~~~~sDiaamGa~P~~-~~~~l~l--p~~~--~~~ 93 (293)
T cd02197 24 EVLEDAAALLVGG---GRLAFTTDSFVVSPLF--FPGGDIGKLAVCGTVNDLAMMGAKPLY-LSLGFIL--EEGF--PLE 93 (293)
T ss_pred ccCCceEEEecCC---ceEEEEecCccccCcc--cCchhHHHHHHHhhHHHHHHcCCcchh-heEEEEC--CCCC--CHH
Confidence 4579999998853 4799999964 322 244778999999999999999999986 5555664 6433 256
Q ss_pred HHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCc
Q 000572 866 AMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGK 945 (1414)
Q Consensus 866 ~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~ 945 (1414)
++.++++|+.++|++||++++||||+.|++.. + ..+.+.+|++|.+++. +.+.+..+++|| .|++ .
T Consensus 94 ~l~~~~~Gi~~~~~~~g~~ivGGdt~~~~~~~--~----~~~~i~~t~~G~~~~~-~~~~r~~a~~GD--~i~v-----t 159 (293)
T cd02197 94 DLERIVKSMAEAAREAGVKIVTGDTKVVPKGK--A----DGIFINTTGIGVIPRG-VIISPSNIRPGD--KIIV-----S 159 (293)
T ss_pred HHHHHHHHHHHHHHHcCCEEEeceeEeccCCc--c----CceEEEEEEEEEEcCC-ccccccCCCCCC--EEEE-----e
Confidence 77889999999999999999999999876421 0 1246777999999753 557777789997 5566 2
Q ss_pred cccchHHHHHHhhhcCCCCCCCCChHHHHHHHHHHHHHHhc-cCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCCC
Q 000572 946 RRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGD-ELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGN 1024 (1414)
Q Consensus 946 ~~LGGS~la~~~~~~~~~~p~v~d~~~lk~~~~~v~~l~~~-g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~~ 1024 (1414)
+.+|.+.........+...+.. -....+........++.. +.++||||||||||+.+|+|||.+|++|++|+++++|.
T Consensus 160 G~~G~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~a~~DiSdgGL~~~L~~~a~~sg~g~~I~~~~iP~ 238 (293)
T cd02197 160 GTIGDHGAAILAAREGLGFETD-IESDCAPLNGLVEALLEAGPGIHAMRDPTRGGLAAVLNEIARASGVGIEIEEEAIPV 238 (293)
T ss_pred CCccHHHHHHHhcccCCCcchh-hhhhhhhhhHHHHHHHhcCCCceEEEcCCcchHHHHHHHHHHHcCCeEEEeeccCCC
Confidence 3445432221110101111110 001122333344555554 47999999999999999999999999999999988753
Q ss_pred chH----------HHhcccccc-eEEEEecCCHHHHHHHHHHc--CCCEEEEEEE
Q 000572 1025 SLF----------QTLFAEELG-LVLEVSKSNLDTVSKKLHDA--GVSAEIIGQV 1066 (1414)
Q Consensus 1025 ~~~----------~~LFsE~~G-~vl~V~~~~~~~v~~~l~~~--gi~~~~IG~v 1066 (1414)
.+. ..++.+++| +|++|++++.+++++.+++. |+++++||+|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~G~ll~tv~~~~~~~i~~~l~~~~~gi~~~vIG~v 293 (293)
T cd02197 239 REEVRGACEMLGLDPLYLANEGKFVAIVPPEDAEEVLEALRSHPLGKEAAIIGEV 293 (293)
T ss_pred CHHHHHHHHHhCcCHHHHhcCCcEEEEECHHHHHHHHHHHHhCCCCCCeEEEEeC
Confidence 211 113444556 69999999999999999998 9999999985
|
HypE is involved in Ni-Fe hydrogenase biosynthesis. HypE dehydrates its own carbamoyl moiety in an ATP-dependent process to yield the enzyme thiocyanate. The N-terminal domain of HypE is related to the ATP-binding domains of the AIR synthases, selenophosphate synthetase (SelD), and FGAM synthase and is thought to bind ATP. |
| >cd02195 SelD Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-28 Score=280.08 Aligned_cols=243 Identities=21% Similarity=0.157 Sum_probs=181.8
Q ss_pred CcCcEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCC-CCcHHHHH
Q 000572 790 TLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKL-DGEGAAMY 868 (1414)
Q Consensus 790 pg~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~-~~e~~~l~ 868 (1414)
+++||||++... ...+++|+|.+++.. .+||.+|++||++|+|||++|||+|+. +.+++++ |... +.+.+++.
T Consensus 40 ~gdDaavi~~~~--~~~lv~stD~~~~~~-~~p~~~G~~av~~~~sDiaa~Ga~P~~-~~~~l~l--p~~~~~~~~~~l~ 113 (287)
T cd02195 40 TGDDAAVYRLPG--GLALVQTTDFFPPIV-DDPYLFGRIAAANALSDIYAMGAKPLS-ALAIVTL--PRKLPALQEEVLR 113 (287)
T ss_pred CCCcEEEEEeCC--CcEEEEEecCCCCCC-CCHHHHHHHHHHHHHHHHHhcCchHHH-HHHHhcC--CCccchhhHHHHH
Confidence 689999998854 357999999776644 699999999999999999999999976 5555665 4322 12456678
Q ss_pred HHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCcccc
Q 000572 869 DAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRL 948 (1414)
Q Consensus 869 ~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~L 948 (1414)
++++|+.++|+++|++++||||+.+. .+++.+|++|.+++ .+.+++..+++|| +|++ .+.+
T Consensus 114 ~~~~Gi~~~~~~~g~~ivGGdt~~~~-----------~~~i~~t~~G~~~~-~~~~~~~~a~~GD--~I~l-----tg~l 174 (287)
T cd02195 114 EILAGGKDKLREAGAVLVGGHTIEGP-----------EPKYGLSVTGLVHP-NKILRNSGAKPGD--VLIL-----TKPL 174 (287)
T ss_pred HHHHHHHHHHHHcCCcEEeeeeccCC-----------CcEEEEEEEEEEcc-hheecCCCCCCCC--EEEE-----cCCc
Confidence 89999999999999999999997331 25788899999975 5678888889997 4566 2347
Q ss_pred chHHHHHHhhhcCCCCC-CCC--ChHHHHHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCCCc
Q 000572 949 GGSALAQVFDQVGNESP-DLE--DVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNS 1025 (1414)
Q Consensus 949 GGS~la~~~~~~~~~~p-~v~--d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~~~ 1025 (1414)
|.+.+...+.. + ..+ +.. ..+...+....+..++.++.++||||+|+|||+.+|.|||.++++|++|+++.++..
T Consensus 175 G~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~DiS~gGL~~~L~~~a~~sg~g~~Id~~~ip~~ 252 (287)
T cd02195 175 GTGILFAAEMA-G-LARGEDIDAALESMARLNRAAAELLRKYGAHACTDVTGFGLLGHLLEMARASGVSAEIDLDKLPLL 252 (287)
T ss_pred hHHHHHHHHHh-c-cCChHHHHHHHHHHHhhhHHHHHHHHhcCCeEeEecCCcHHHHHHHHHHhhcCCeEEEEeCCCceE
Confidence 77654322111 1 111 100 011122222223344455679999999999999999999999999999999876422
Q ss_pred hHHHhcccccc-eEEEEecCCHHHHHHHHHHcCCCEEEEEEE
Q 000572 1026 LFQTLFAEELG-LVLEVSKSNLDTVSKKLHDAGVSAEIIGQV 1066 (1414)
Q Consensus 1026 ~~~~LFsE~~G-~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v 1066 (1414)
+..| +|++|++++.+++.+.+++.|+++++||+|
T Consensus 253 -------~~~Ggll~~v~~e~~~~~~~~~~~~g~~~~~IG~v 287 (287)
T cd02195 253 -------QTSGGLLAAVPPEDAAALLALLKAGGPPAAIIGEV 287 (287)
T ss_pred -------eccCceEEEEcHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 4444 799999999999999999999999999985
|
The N-terminal domain of SelD is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, and FGAM synthase and is thought to bind ATP. |
| >cd06061 PurM-like1 AIR synthase (PurM) related protein, subgroup 1 of unknown function | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.8e-28 Score=279.33 Aligned_cols=272 Identities=17% Similarity=0.199 Sum_probs=193.9
Q ss_pred hhHHHHHHHHhccC---CCCceee--eccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHH
Q 000572 339 RTLMQIVKSTLQAN---PNNSVIG--FKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPG 413 (1414)
Q Consensus 339 ~~lf~~I~~~~~~~---~~~~~~g--~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~g 413 (1414)
.++|.+|+..++.. .+++..| ++|||||++... . .+++++++-. -.||..
T Consensus 5 ~~e~~l~~~~~~~~~~~~~~~~~g~~~gdDaav~~~~~--------------------~-~lv~s~D~~~----~~~~~i 59 (298)
T cd06061 5 LPPEFLKRLILKNLGADRDEVLVGPGGGEDAAVVDFGG--------------------K-VLVVSTDPIT----GAGKDA 59 (298)
T ss_pred CCHHHHHHHHHhhcCCCCcccccCCCccceeEEEeeCC--------------------c-EEEEEcCcee----eCCcce
Confidence 35777777665532 2456666 799999997321 1 2233333211 139999
Q ss_pred HhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeee
Q 000572 414 AETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQ 493 (1414)
Q Consensus 414 A~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~Gvplvg 493 (1414)
+++++..|+||++|| ||+|+++++++++++ . ...+.++++++|+.++|++||+|++|
T Consensus 60 G~~av~~~~sDi~am--Ga~P~~~~~~l~~p~-----~----------------~~~~~l~~~~~Gi~~~~~~~gi~ivG 116 (298)
T cd06061 60 GWLAVHIAANDIATS--GARPRWLLVTLLLPP-----G----------------TDEEELKAIMREINEAAKELGVSIVG 116 (298)
T ss_pred eeehhhhhHHHHHhc--CCCCceeEEEEEcCC-----C----------------CCHHHHHHHHHHHHHHHHHcCCeEEe
Confidence 999999999999999 999999999998742 1 12457889999999999999999999
Q ss_pred eeeEEeccccCCCCccccCCceEEEEEEEeeeCcc-cccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccc
Q 000572 494 GYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNH-ISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFN 572 (1414)
Q Consensus 494 G~t~s~~~~~~~g~~~~~~~Plv~~~~vG~v~~~~-i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~ 572 (1414)
|+|... . ....|.+.++++|.+++.. +.|++++|||.|+++|. +|.+|+.+......+ .+.
T Consensus 117 G~t~~~-~--------~~~~~~i~vt~~G~~~~~~~~~~~~a~~Gd~i~ltg~----~G~~~~~l~~~~~~~---~~~-- 178 (298)
T cd06061 117 GHTEVT-P--------GVTRPIISVTAIGKGEKDKLVTPSGAKPGDDIVMTKG----AGIEGTAILANDFEE---ELK-- 178 (298)
T ss_pred eeeEEc-C--------CCCccEEEEEEEEEEcccccccccCCCCCCEEEEeCC----chHHHHHHHHHhhHH---HHh--
Confidence 999532 1 1234778889999988765 46778999999999984 667766543221111 000
Q ss_pred cccCCCH-HHHH--HH-HH--HHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCC-------
Q 000572 573 AVQRGDA-EMAQ--KL-YR--VVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDH------- 637 (1414)
Q Consensus 573 ~Vq~~~p-~~e~--~l-~~--~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~------- 637 (1414)
...++ .+++ .. .+ .++....+ ....+++|||+|.|||..+|.|||. ++|++||+++||+.+.
T Consensus 179 --~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~DiSdGGL~~~l~~la~~s~~g~~i~~~~iP~~~~~~~~~~~ 255 (298)
T cd06061 179 --KRLSEEELREAAKLFYKISVVKEALIA-AEAGVTAMHDATEGGILGALWEVAEASGVGLRIEKDKIPIRQETKEICEA 255 (298)
T ss_pred --hhcCHHHHHHHHHhhhhhhhHHHHHHh-hhcCeeEEEeCCccHHHHHHHHHHHHcCCeEEEEecccCcCHHHHHHHHH
Confidence 00111 1111 11 11 01222212 2226899999998899999999998 8999999999998664
Q ss_pred -CccHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEE
Q 000572 638 -TLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTI 682 (1414)
Q Consensus 638 -~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~v 682 (1414)
+++|+++..+ +++++++++++.+++.+++++.++++++||+|
T Consensus 256 ~~~~~~~~~~~---G~ll~~v~~~~~~~~~~~~~~~g~~~~~IG~v 298 (298)
T cd06061 256 LGIDPLRLISS---GTLLITVPPEKGDELVDALEEAGIPASVIGKI 298 (298)
T ss_pred cCCCHHHhhcC---CcEEEEEChHHHHHHHHHHHHCCCCeEEEEeC
Confidence 4567665443 46999999999999999999999999999985
|
The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain. |
| >COG0118 HisH Glutamine amidotransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-28 Score=253.42 Aligned_cols=191 Identities=25% Similarity=0.316 Sum_probs=154.1
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~ 1224 (1414)
|+|+|| ++|+.|.+++.+||+++|+++.+.. +++.+..+|+|||||+++|+|+|. .|+..++.+.
T Consensus 2 ~~i~II-Dyg~GNL~Sv~~Aler~G~~~~vs~------d~~~i~~AD~liLPGVGaf~~am~--------~L~~~gl~~~ 66 (204)
T COG0118 2 MMVAII-DYGSGNLRSVKKALERLGAEVVVSR------DPEEILKADKLILPGVGAFGAAMA--------NLRERGLIEA 66 (204)
T ss_pred CEEEEE-EcCcchHHHHHHHHHHcCCeeEEec------CHHHHhhCCEEEecCCCCHHHHHH--------HHHhcchHHH
Confidence 578888 7899999999999999999998875 667789999999999999999997 5666689999
Q ss_pred HHHHHhCCCCeEEEEehhhHHHHh----------cCccCCCCCCCccCCCCC-CCCCeeeecCCCceEEeeEEEEEccCC
Q 000572 1225 FQEFYKRPDTFSLGVCNGCQLMAL----------LGWIPGPQVGGVHGAGGD-PSQPRFVHNESGRFECRFSSVTIEDSP 1293 (1414)
Q Consensus 1225 i~~f~~~~~~piLGIC~G~QlL~~----------lgllp~~~g~~~~~~~~~-~~~p~l~~N~s~~fe~r~v~v~i~~~~ 1293 (1414)
|++.+. .++|+||||+|||+|++ |||+| |.+.+ ++.. .+.|||.|| .+.+. ..
T Consensus 67 i~~~~~-~~kP~LGIClGMQlLfe~SeE~~~~~GLg~i~---G~V~r-~~~~~~kvPHMGWN----------~l~~~-~~ 130 (204)
T COG0118 67 IKEAVE-SGKPFLGICLGMQLLFERSEEGGGVKGLGLIP---GKVVR-FPAEDLKVPHMGWN----------QVEFV-RG 130 (204)
T ss_pred HHHHHh-cCCCEEEEeHhHHhhhhcccccCCCCCcceec---ceEEE-cCCCCCCCCccccc----------eeecc-CC
Confidence 999985 78999999999999998 57777 44433 3333 689999999 77776 77
Q ss_pred CccccCCC-CcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEE
Q 000572 1294 AIMLKGME-GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAM 1372 (1414)
Q Consensus 1294 s~~l~g~~-g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~ 1372 (1414)
+++|+|++ |+++| |+|| |++. +.. ....+.+++ | |.+ ++++.. ++|++|.
T Consensus 131 ~~l~~gi~~~~~~Y--FVHS---Y~~~-~~~-------~~~v~~~~~--------Y-----G~~--f~AaV~-k~N~~g~ 181 (204)
T COG0118 131 HPLFKGIPDGAYFY--FVHS---YYVP-PGN-------PETVVATTD--------Y-----GEP--FPAAVA-KDNVFGT 181 (204)
T ss_pred ChhhcCCCCCCEEE--EEEE---Eeec-CCC-------CceEEEecc--------C-----CCe--eEEEEE-eCCEEEE
Confidence 89999995 58999 8999 6653 211 122344544 7 764 455554 5899999
Q ss_pred ccCCccccccccCCCCCCCCCCCCCCCChhHHHHHHHHHhhC
Q 000572 1373 MPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS 1414 (1414)
Q Consensus 1373 m~HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~~ 1414 (1414)
|||||||.. -++++++|+++|+.
T Consensus 182 QFHPEKSg~-------------------~Gl~lL~NFl~~~~ 204 (204)
T COG0118 182 QFHPEKSGK-------------------AGLKLLKNFLEWIP 204 (204)
T ss_pred ecCcccchH-------------------HHHHHHHHHHhhcC
Confidence 999999987 59999999999963
|
|
| >TIGR01379 thiL thiamine-monophosphate kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-27 Score=276.27 Aligned_cols=259 Identities=19% Similarity=0.166 Sum_probs=185.7
Q ss_pred CcCcEEEEEecCCCceEeEEEEccC----CCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHH
Q 000572 790 TLADVAVIAQTYTDLTGGACAIGEQ----PIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGA 865 (1414)
Q Consensus 790 pg~DaAVi~~~~~~~~gla~s~g~~----p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~ 865 (1414)
+++||||++++. +..+++|+|.. +++...+||.+|++||++|+|||+||||+|+. +. ++++.|... +..
T Consensus 23 ~gdDaavi~~~~--~~~lvis~D~~~~~~~~~~~~~p~~~G~~av~~~~sDiaa~Ga~P~~-~~--~~~~~P~~~--~~~ 95 (317)
T TIGR01379 23 IGDDAALVSAPE--GRDLVLTTDTLVEGVHFPPDTTPEDLGWKAVAVNLSDLAAMGATPKW-FL--LSLGLPSDL--DEA 95 (317)
T ss_pred CCCcEEEEecCC--CCeEEEEeccccCCcCCCCCCCHHHHHHHHHHHHHHHHHHcCCcccE-EE--EEEEcCCCC--CHH
Confidence 579999998865 35799999953 45555699999999999999999999999975 33 355667543 245
Q ss_pred HHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCc
Q 000572 866 AMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGK 945 (1414)
Q Consensus 866 ~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~ 945 (1414)
++.++++|+.++|+++|++++|||++.++ -|++.+|++|.+++ .+.+++..+++|| . |++ ++
T Consensus 96 ~l~~i~~Gi~~a~~~~g~~ivGG~t~~~~-----------~~~i~vt~iG~~~~-~~~~~~~~a~~Gd-~-I~l-tg--- 157 (317)
T TIGR01379 96 WLEAFYDGLFECAKQYGVPLVGGDTVSSP-----------ELVVTVTAIGEAPK-GRALLRSGAKPGD-L-VFV-TG--- 157 (317)
T ss_pred HHHHHHHHHHHHHHHcCCeEECccCCCCC-----------CcEEEEEEEEEeCC-CCceecCCCCCCC-E-EEE-cC---
Confidence 67889999999999999999999998763 15788999999875 4567788889997 4 455 22
Q ss_pred cccchHHHH--HHhhhcCCCCCCCCChHHHHHHH------HHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEE
Q 000572 946 RRLGGSALA--QVFDQVGNESPDLEDVPYLKRVF------ETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITL 1017 (1414)
Q Consensus 946 ~~LGGS~la--~~~~~~~~~~p~v~d~~~lk~~~------~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~I 1017 (1414)
.+|.+..+ ............. ..+..+.++ +....+. +.++||||+|+ ||+.+|+|||.++++|++|
T Consensus 158 -~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~l~--~~v~a~~DvS~-GL~~~l~ema~~sg~g~~i 232 (317)
T TIGR01379 158 -TLGDSAAGLALLLKGKKEPDEED-DEELLQRHLRPEPRVEEGLALA--GYANAAIDVSD-GLASDLGHIAEASGVGIVI 232 (317)
T ss_pred -chhHHHHHHHHHhcCCccCcchh-HHHHHHHhcCCCChHHHHHHHh--hhcceeEEchH-hHHHHHHHHHHHcCCcEEE
Confidence 34433322 1111111110000 011122221 2222232 26999999999 6999999999999999999
Q ss_pred EeCCCCCc-----------hH--HHhcccccceEEEEecCCHHHHHHHHHHcCCCEEEEEEEeCCCcEEEEECCEEE
Q 000572 1018 DLNSEGNS-----------LF--QTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTH 1081 (1414)
Q Consensus 1018 dl~~~~~~-----------~~--~~LFsE~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i~~~g~~i 1081 (1414)
+++.++.. ++ ...++|++++|++|++++.+++++.+++ ++++||+|++++.+.+..+|+++
T Consensus 233 ~~~~ipv~~~~~~~~~~~~~~~~~~~~ge~~~ll~~v~~~~~~~~~~~~~~---~~~~IG~v~~~~~~~~~~~~~~~ 306 (317)
T TIGR01379 233 DLDRLPLSSELAAWAEGKDPLEWALSGGEDYELVFTVPPERREALLDAAKG---PLTRIGRVTEGEGVVLLADGKTV 306 (317)
T ss_pred ehhcCCCCHHHHHHhcCCCHHHHHhcCCcceeEEEEeCHHHHHHHHhhccC---CceEEEEEEcCCceEEEeCCcEe
Confidence 99887522 22 2345688889999999999999888764 89999999987765555677654
|
Proteins scoring between the trusted and noise cutoff for this model include short forms from the Thermoplasmas (which lack the N-terminal region) and a highly derived form from Campylobacter jejuni. Eukaryotes lack this enzyme, and add pyrophosphate from ATP to unphosphorylated thiamine in a single step. |
| >cd00396 PurM-like AIR (aminoimidazole ribonucleotide) synthase related protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=269.94 Aligned_cols=213 Identities=23% Similarity=0.294 Sum_probs=176.0
Q ss_pred EEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHH
Q 000572 395 VLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILI 474 (1414)
Q Consensus 395 i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~ 474 (1414)
++++++++++++..+||.+|++++++++||++|| ||+|++++++++++++ .+.+.+.
T Consensus 2 l~~~~D~~~~~~~~~p~~~g~~av~~~~sDl~a~--Ga~P~~~~~~l~~~~~---------------------~~~~~~~ 58 (222)
T cd00396 2 LAMSTDGINPPLAINPWAGGRLAVGGAVNDIAAM--GARPIALLASLSLSNG---------------------LEVDILE 58 (222)
T ss_pred eEEEECCCCCCcCCCCccHHHHHHHHhHHHHHhc--CCccHHHhhheccCCC---------------------CCHHHHH
Confidence 5689999999988999999999999999999999 9999999999987432 1245788
Q ss_pred HHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCCceEEEEEEEeeeCcccc-cCCCCCCCEEEEEccCCCccccc
Q 000572 475 DASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHIS-KGEPDIGMLVVKIGGPAYRIGMG 553 (1414)
Q Consensus 475 ~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~Plv~~~~vG~v~~~~i~-r~~a~~GD~Ivv~G~~~g~~Glg 553 (1414)
++++|++++|+++|+|++||+|... +.+ ....|.+.++++|.+++.... +..+++||.|+++|-
T Consensus 59 ~~~~Gi~~~~~~~gi~ivgG~t~~~-~~~------~~~~~~i~~t~~G~~~~~~~~~~~~~~~Gd~lv~~g~-------- 123 (222)
T cd00396 59 DVVDGVAEACNQLGVPIVGGHTSVS-PGT------MGHKLSLAVFAIGVVEKDRVIDSSGARPGDVLILTGV-------- 123 (222)
T ss_pred HHHHHHHHHHHHcCCeEeceeeEEc-cCC------cCCCceEEEEEEEEecCCccccccCCCCCCEEEEeCh--------
Confidence 9999999999999999999999542 211 124677788999999877654 467999999999870
Q ss_pred HHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCC
Q 000572 554 GGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRA 631 (1414)
Q Consensus 554 Gaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~ 631 (1414)
+. ++. +.+.+.+++|||+|.|||+.+|.||+. ++|++|++++
T Consensus 124 -----------------------------~~----~~~---l~~~~~v~a~~Dvs~GGl~~~l~ema~~s~~g~~i~~~~ 167 (222)
T cd00396 124 -----------------------------DA----VLE---LVAAGDVHAMHDITDGGLLGTLPELAQASGVGAEIDLEA 167 (222)
T ss_pred -----------------------------HH----HHH---HHHhCCeeEEEeCCCCcHHHHHHHHHHhcCCEEEEeccc
Confidence 00 111 123457999999999999999999998 8999999999
Q ss_pred CCCCCCCcc-----HHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEE
Q 000572 632 IIVGDHTLS-----VLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGT 681 (1414)
Q Consensus 632 iP~~~~~l~-----p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~ 681 (1414)
||+.+.... +...++++++.+++++++|++.++++++++++|+++++||+
T Consensus 168 ip~~~~~~~~~~~~~~~~~~~~~~~~ll~~v~~~~~~~~~~~~~~~g~~~~~IG~ 222 (222)
T cd00396 168 IPLDEVVRWLCVEHIEEALLFNSSGGLLIAVPAEEADAVLLLLNGNGIDAAVIGR 222 (222)
T ss_pred CcCcHHHHHHHHhcCcchhhhccCccEEEEECHHHHHHHHHHHHHcCCCEEEeCC
Confidence 998875322 23356778899999999999999999999999999999995
|
This family includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM (formylglycinamidine ribonucleotide) synthase and Selenophosphate synthetase (SelD). The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain. |
| >cd00396 PurM-like AIR (aminoimidazole ribonucleotide) synthase related protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=264.61 Aligned_cols=210 Identities=26% Similarity=0.301 Sum_probs=169.9
Q ss_pred eEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhCCccc
Q 000572 807 GACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAID 886 (1414)
Q Consensus 807 la~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~~~~gl~eac~~lGv~iv 886 (1414)
+++++|..+.....||+.+|+++|++|+|||++||++|+. +.. ++++|.. .+.+.++++++|+.++|+++|++++
T Consensus 2 l~~~~D~~~~~~~~~p~~~g~~av~~~~sDl~a~Ga~P~~-~~~--~l~~~~~--~~~~~~~~~~~Gi~~~~~~~gi~iv 76 (222)
T cd00396 2 LAMSTDGINPPLAINPWAGGRLAVGGAVNDIAAMGARPIA-LLA--SLSLSNG--LEVDILEDVVDGVAEACNQLGVPIV 76 (222)
T ss_pred eEEEECCCCCCcCCCCccHHHHHHHHhHHHHHhcCCccHH-Hhh--heccCCC--CCHHHHHHHHHHHHHHHHHcCCeEe
Confidence 6899999888877899999999999999999999999965 443 4556643 2456788999999999999999999
Q ss_pred ccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCccccchHHHHHHhhhcCCCCCC
Q 000572 887 GGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPD 966 (1414)
Q Consensus 887 GGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~LGGS~la~~~~~~~~~~p~ 966 (1414)
||||++++.+ ...++++.+|++|.+++. +.+.+..+++|| .|+++ |
T Consensus 77 gG~t~~~~~~------~~~~~~i~~t~~G~~~~~-~~~~~~~~~~Gd-~lv~~--g------------------------ 122 (222)
T cd00396 77 GGHTSVSPGT------MGHKLSLAVFAIGVVEKD-RVIDSSGARPGD-VLILT--G------------------------ 122 (222)
T ss_pred ceeeEEccCC------cCCCceEEEEEEEEecCC-ccccccCCCCCC-EEEEe--C------------------------
Confidence 9999987542 123579999999999864 345578889998 44444 2
Q ss_pred CCChHHHHHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCCCch----------H-HHhccccc
Q 000572 967 LEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSL----------F-QTLFAEEL 1035 (1414)
Q Consensus 967 v~d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~~~~----------~-~~LFsE~~ 1035 (1414)
++.++++++++.++||||+|||||+.+|+|||.++++|++|+++.++..+ . ..+|++++
T Consensus 123 ----------~~~~~~l~~~~~v~a~~Dvs~GGl~~~l~ema~~s~~g~~i~~~~ip~~~~~~~~~~~~~~~~~~~~~~~ 192 (222)
T cd00396 123 ----------VDAVLELVAAGDVHAMHDITDGGLLGTLPELAQASGVGAEIDLEAIPLDEVVRWLCVEHIEEALLFNSSG 192 (222)
T ss_pred ----------hHHHHHHHHhCCeeEEEeCCCCcHHHHHHHHHHhcCCEEEEecccCcCcHHHHHHHHhcCcchhhhccCc
Confidence 12234566677899999999999999999999999999999998765221 1 23455666
Q ss_pred ceEEEEecCCHHHHHHHHHHcCCCEEEEEE
Q 000572 1036 GLVLEVSKSNLDTVSKKLHDAGVSAEIIGQ 1065 (1414)
Q Consensus 1036 G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~ 1065 (1414)
++|++|++++++++++.+++.|+++.+||+
T Consensus 193 ~ll~~v~~~~~~~~~~~~~~~g~~~~~IG~ 222 (222)
T cd00396 193 GLLIAVPAEEADAVLLLLNGNGIDAAVIGR 222 (222)
T ss_pred cEEEEECHHHHHHHHHHHHHcCCCEEEeCC
Confidence 789999999999999999999999999995
|
This family includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM (formylglycinamidine ribonucleotide) synthase and Selenophosphate synthetase (SelD). The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain. |
| >cd02196 PurM PurM (Aminoimidazole Ribonucleotide [AIR] synthetase), one of eleven enzymes required for purine biosynthesis, catalyzes the conversion of formylglycinamide ribonucleotide (FGAM) and ATP to AIR, ADP, and Pi, the fifth step in de novo purine biosynthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-27 Score=272.75 Aligned_cols=260 Identities=17% Similarity=0.095 Sum_probs=185.2
Q ss_pred CCcCcEEEEEecCCC--ceEeEEEEccCCCCCCC-----CHHHHHHHHHHHHhhchhccCcccccccccccccccccCCC
Q 000572 789 ITLADVAVIAQTYTD--LTGGACAIGEQPIKGLL-----NPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLD 861 (1414)
Q Consensus 789 ~pg~DaAVi~~~~~~--~~gla~s~g~~p~~~~~-----dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~ 861 (1414)
.++.||++++...++ ...+++++|..+..... .++..||+||++|+|||+||||+|+. +..++++ |+ +
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~D~~~~~~~~~~~~~~~~~iG~~av~~~~sDiaamGa~P~~-~~~~l~~--~~--~ 76 (297)
T cd02196 2 GIGGFAGLFDLGLGGYKDPVLVSGTDGVGTKLKLAQEMGKHDTIGIDLVAMCVNDILCQGAEPLF-FLDYIAT--GK--L 76 (297)
T ss_pred CCCceeEEEeccccCCCCcEEEEecCCcchHHHHHHHcCCHhHHHHHHHHHhHHHHHHcCCEeHH-HHhhhhc--CC--C
Confidence 367899999987532 46789999976443333 35789999999999999999999976 4455665 43 2
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCcccccccccccccccCCceee--cCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEE
Q 000572 862 GEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVK--APGSLVISVYVTCPDITKTVTPDLKLGDDGILLHI 939 (1414)
Q Consensus 862 ~e~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~--~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v 939 (1414)
..++++++++|+.++|+++|++++||||+.+.. +. .-+.+++|++|.+++ ++.+++..+++|| .| ++
T Consensus 77 -~~~~l~~~~~Gi~~~~~~~gi~ivGGdt~~~~~-------~~~~~~~~isvt~iG~~~~-~~~~~~~~a~~Gd-~I-~~ 145 (297)
T cd02196 77 -DPEVAAEIVKGIAEGCRQAGCALLGGETAEMPG-------VYAEGEYDLAGFAVGVVEK-DKIIDGSKIKPGD-VL-IG 145 (297)
T ss_pred -CHHHHHHHHHHHHHHHHHcCCeEeeecceEccC-------cccCCceeEEEEEEEEEec-cccccccCCCCCC-EE-EE
Confidence 357788999999999999999999999975422 11 113577899999976 5778899999997 44 44
Q ss_pred EcCCCccccc-hHHHH-HHhhhcCCCCCCCC----C--hH----HHHHHHHHHHHHHhccCceEEEeCCCCchHHHHHHH
Q 000572 940 DLAKGKRRLG-GSALA-QVFDQVGNESPDLE----D--VP----YLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEM 1007 (1414)
Q Consensus 940 ~lg~~~~~LG-GS~la-~~~~~~~~~~p~v~----d--~~----~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EM 1007 (1414)
++. .+..| |+.+. ..+.......++++ + .+ ..+.+.+.+..+.+.+.++||||+|+|||+++|+||
T Consensus 146 -tg~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~a~~DiS~gGL~~~L~e~ 223 (297)
T cd02196 146 -LPS-SGLHSNGYSLVRKILFEEGLDYDDPEPGLGKTLGEELLTPTRIYVKPILPLLEKVLVKGMAHITGGGLPENLPRV 223 (297)
T ss_pred -ccC-cchhhhHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHHhcCCceEEEeCCCCchhhccHhh
Confidence 233 22232 44333 23322111222210 0 01 112233445556666789999999999999999999
Q ss_pred HhcCCeEEEEEeCCCCCchHHHhccc---------------ccceEEEEecCCHHHHHHHHHHcCCCEEEEEEEe
Q 000572 1008 SFAGNYGITLDLNSEGNSLFQTLFAE---------------ELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVN 1067 (1414)
Q Consensus 1008 a~as~~G~~Idl~~~~~~~~~~LFsE---------------~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~ 1067 (1414)
|.+ ++|++|+++.++..+...+|+| .+|+|++|++++.+++.+.++++|+++++||+|+
T Consensus 224 a~~-~~g~~Id~~~iPv~~~~~~~~e~~~~~p~~~~~~~~~g~gll~~v~~~~~~~~~~~l~~~gi~a~~IG~v~ 297 (297)
T cd02196 224 LPE-GLGAVIDLGSWEIPPIFKWIQKAGNVSEEEMYRTFNMGIGMVLIVSEEDADEVLEILEKLGEKAYVIGEVV 297 (297)
T ss_pred ccC-CceEEEecCCCCCCHHHHHHHHhCCCCHHHHHHHHhCCCCEEEEECHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 875 9999999998654332223333 2458999999999999999999999999999985
|
The N-terminal domain of PurM is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, selenophosphate synthetase (SelD), and FGAM synthase and is thought to bind ATP. |
| >PRK05731 thiamine monophosphate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=271.68 Aligned_cols=259 Identities=21% Similarity=0.201 Sum_probs=182.1
Q ss_pred CcCcEEEEEecCCCceEeEEEEcc-----CCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcH
Q 000572 790 TLADVAVIAQTYTDLTGGACAIGE-----QPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEG 864 (1414)
Q Consensus 790 pg~DaAVi~~~~~~~~gla~s~g~-----~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~ 864 (1414)
+++||||+++.. +..+++++|. +.+....|||.+|++||++|+|||+||||+|+. +.+ +++.|++. +.
T Consensus 24 ~gdDaavi~~~~--~~~lvit~D~~~~~~~~~~~~~~p~~~g~~av~~~~sDi~a~Ga~P~~-~~~--~l~~p~~~--~~ 96 (318)
T PRK05731 24 IGDDAALLGPPP--GQRLVVSTDMLVEGVHFRPDWSSPEDLGYKALAVNLSDLAAMGARPAA-FLL--ALALPKDL--DE 96 (318)
T ss_pred CCCcEEEeccCC--CCeEEEEecccccccCcCCCCCCHHHHHHHHHHHHHHHHHHcCCCcce-EEE--EEEcCCCC--CH
Confidence 479999998864 2579999983 222335799999999999999999999999975 333 45567543 34
Q ss_pred HHHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCC
Q 000572 865 AAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKG 944 (1414)
Q Consensus 865 ~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~ 944 (1414)
.++.++++||.++|+++|++++||||+.+ . -|++.+|++|.+++. +.+++..+++|| +|++ ++
T Consensus 97 ~~l~~i~~Gi~~~~~~~g~~ivGG~t~~~-------~----~~~i~vt~iG~~~~~-~~~~~~~a~~Gd--~i~l-tg-- 159 (318)
T PRK05731 97 AWLEALADGLFELADRYGAELIGGDTTRG-------P----DLSISVTAIGDVPGG-RALRRSGAKPGD--LVAV-TG-- 159 (318)
T ss_pred HHHHHHHHHHHHHHHHhCCeEECcccCCC-------C----CcEEEEEEEEEcCCC-CcccccCCCCCC--EEEE-EC--
Confidence 56788999999999999999999999743 1 158889999999764 357788889997 4455 22
Q ss_pred ccccchHHHHHHhhhcCCCCCCCCChHHH-HHHH------HHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEE
Q 000572 945 KRRLGGSALAQVFDQVGNESPDLEDVPYL-KRVF------ETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITL 1017 (1414)
Q Consensus 945 ~~~LGGS~la~~~~~~~~~~p~v~d~~~l-k~~~------~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~I 1017 (1414)
.+|.+..+..+.......+.. ..+.+ ..+. +....+ .+.++||||+|+ ||+++|+|||.++++|++|
T Consensus 160 --~~G~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~--~~~v~a~~DiS~-GL~~~l~ema~~s~~g~~i 233 (318)
T PRK05731 160 --TLGDSAAGLALLLNGLRVPDA-DAAALISRHLRPQPRVGLGQAL--AGLASAAIDISD-GLAADLGHIAEASGVGADI 233 (318)
T ss_pred --CccHHHHHHHHHhcCCCCChh-hHHHHHHHhcCCCCCHHHHHHH--hhhchhheechH-hHHHHHHHHHHHCCCeEEE
Confidence 344443322111111111111 00111 1111 111112 345899999998 7999999999999999999
Q ss_pred EeCCCCCc-----------hHHHh-c-ccccceEEEEecCCHHHHHHHHHHcCCCEEEEEEEeCCCcEEEEECCEE
Q 000572 1018 DLNSEGNS-----------LFQTL-F-AEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLT 1080 (1414)
Q Consensus 1018 dl~~~~~~-----------~~~~L-F-sE~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i~~~g~~ 1080 (1414)
+++.++.. +...+ + +|++++|++|++++.+++++++++.|+++++||+|++++ .+..+|+.
T Consensus 234 ~~~~ipi~~~~~~~~~~~~~~~~~~~~g~~~~ll~~v~~~~~~~~~~~l~~~g~~~~~IG~v~~~~--~~~~~~~~ 307 (318)
T PRK05731 234 DLDALPISPALREAAEGEDALRWALSGGEDYELLFTFPPENRGALLAAAGHLGVGVTIIGRVTEGE--GVVVDGEP 307 (318)
T ss_pred eHHhCCCCHHHHHHhcCCCHHHHHhcCCCceeEEEEECHHHHHHHHHHHHhcCCCceEEEEEEcCc--eEecCCCE
Confidence 98766422 22222 2 345568999999999999999999999999999999876 33445554
|
|
| >COG0611 ThiL Thiamine monophosphate kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=261.83 Aligned_cols=258 Identities=21% Similarity=0.210 Sum_probs=196.4
Q ss_pred CCCcCcEEEEEecCCCceEeEEEEcc----CCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCc
Q 000572 788 QITLADVAVIAQTYTDLTGGACAIGE----QPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGE 863 (1414)
Q Consensus 788 ~~pg~DaAVi~~~~~~~~gla~s~g~----~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e 863 (1414)
...|||||++....+ ..+|+|+|. .++...++|+..||+|++.|+|||+||||+|.. +.+|+. +|... +
T Consensus 23 ~~~GDDaA~v~~~~~--~~lvvttD~lv~~~hF~~~~~p~d~G~Ka~a~NlSDlAAMGa~P~~-~~lsl~--lP~~~--d 95 (317)
T COG0611 23 LGIGDDAALVDAPEG--QRLVVTTDMLVEGTHFPPDMTPEDLGWKALAVNLSDLAAMGARPKA-FLLSLG--LPPDL--D 95 (317)
T ss_pred ccCCCceEEEecCCC--ceEEEEecccccccccCCCCCHHHHHHHHHHHHHHHHHHcCCCchh-heeeee--CCCCC--C
Confidence 346899999998764 479999995 577777889999999999999999999999965 556654 46432 3
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCC
Q 000572 864 GAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAK 943 (1414)
Q Consensus 864 ~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~ 943 (1414)
.+++.++++|+.++|+.||+++|||++.- .|.++++|++|.+++. +.+++..++||| +|+|
T Consensus 96 ~~~~~~~~~Gi~e~~~~y~~~lIGGDt~~------------~~l~is~t~iG~~~~~-~~l~R~gAkpGD--~v~v---- 156 (317)
T COG0611 96 EEWLEALADGIFEAAKKYGVKLIGGDTNR------------GPLSISVTAIGVLPKG-RALLRSGAKPGD--LVAV---- 156 (317)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEeccccCC------------CceEEEEEEEEecCCC-chhhccCCCCCC--EEEE----
Confidence 46677799999999999999999999842 1568889999999875 578899999997 7888
Q ss_pred CccccchHHHHHH-hhhcCCCCCCCCChHHHHHHHH------HHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEE
Q 000572 944 GKRRLGGSALAQV-FDQVGNESPDLEDVPYLKRVFE------TVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGIT 1016 (1414)
Q Consensus 944 ~~~~LGGS~la~~-~~~~~~~~p~v~d~~~lk~~~~------~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~ 1016 (1414)
++.+|-|+.+.. +.. ...+.. .....+++++ ....+. . +++||.|+|| ||+++|.+||.+|+||++
T Consensus 157 -tG~lG~saagl~ll~~--~~~~~~-~~~l~~r~~~P~Prv~~g~~l~-~-~a~aa~DiSD-GL~~dL~~i~~aS~vg~~ 229 (317)
T COG0611 157 -TGTLGRSAAGLELLLN--VLGPED-EEELIERHLRPTPRVELGLALA-K-LASAAMDISD-GLAADLGHIARASGVGIV 229 (317)
T ss_pred -cCCCchhHHHHHHHhc--ccCcch-hHHHHHHhcCCCCChhHHHHHH-H-HHHHheecch-hHHHHHHHHHHHcCCeEE
Confidence 667898876532 211 111111 1223333332 112222 2 6789999999 899999999999999999
Q ss_pred EEeCCCCC------------chHH--HhcccccceEEEEecCCHHHHHHHHHHcCCCEEEEEEEeCCCcEEEEECCEE
Q 000572 1017 LDLNSEGN------------SLFQ--TLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLT 1080 (1414)
Q Consensus 1017 Idl~~~~~------------~~~~--~LFsE~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i~~~g~~ 1080 (1414)
|+.+.++. ++++ ...+|++.+|+++++++.+.++.+++..| +++||+++++....+..+|++
T Consensus 230 I~~~~lp~~~~~~~~~~~~~~~~~~aL~gGEDyELvft~p~~~~~~~~~~~~~~~--~~~IG~v~~~~g~~~~~dgk~ 305 (317)
T COG0611 230 IDEDLLPLSDAVLEALDELGDPLEWALSGGEDYELVFTVPEENREALLDALRSLG--VTIIGRVTEGEGVVVLVDGKE 305 (317)
T ss_pred EEeccCCCcHHHHHHHhccCCHHHHHhccCCceEEEEEeCchhHHHHHHHHHhcC--ceEEEEEeecCCeEEEecCce
Confidence 99987641 2222 12468899999999999999999999888 899999995554556677775
|
|
| >cd02196 PurM PurM (Aminoimidazole Ribonucleotide [AIR] synthetase), one of eleven enzymes required for purine biosynthesis, catalyzes the conversion of formylglycinamide ribonucleotide (FGAM) and ATP to AIR, ADP, and Pi, the fifth step in de novo purine biosynthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-27 Score=274.27 Aligned_cols=267 Identities=14% Similarity=0.106 Sum_probs=183.9
Q ss_pred CCCccccccCC----ceEEEEEeccc----CCCC-CCCcHHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCC
Q 000572 381 GSRCQLSESSQ----DLDVLFTAETH----NFPC-AVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGS 451 (1414)
Q Consensus 381 g~~~~~~~~~~----~~~i~~~vEth----n~p~-~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~ 451 (1414)
|.||++++.++ ++.+++++++- .+|. .-.++..|++++..|+|||+|| ||+|++++++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~l~~~~D~~~~~~~~~~~~~~~~~iG~~av~~~~sDiaam--Ga~P~~~~~~l~~~~~----- 76 (297)
T cd02196 4 GGFAGLFDLGLGGYKDPVLVSGTDGVGTKLKLAQEMGKHDTIGIDLVAMCVNDILCQ--GAEPLFFLDYIATGKL----- 76 (297)
T ss_pred CceeEEEeccccCCCCcEEEEecCCcchHHHHHHHcCCHhHHHHHHHHHhHHHHHHc--CCEeHHHHhhhhcCCC-----
Confidence 34444444443 56777888865 3443 2347889999999999999999 9999999999987431
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCcccc--CCceEEEEEEEeeeCcc-
Q 000572 452 YAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREW--LKPIMFSGGIGQIDHNH- 528 (1414)
Q Consensus 452 ~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~--~~Plv~~~~vG~v~~~~- 528 (1414)
+.+.+.++++|+.++|+++|+|++||||.... . .+ ..+.+.++++|.+++++
T Consensus 77 -----------------~~~~l~~~~~Gi~~~~~~~gi~ivGGdt~~~~-~-------~~~~~~~~isvt~iG~~~~~~~ 131 (297)
T cd02196 77 -----------------DPEVAAEIVKGIAEGCRQAGCALLGGETAEMP-G-------VYAEGEYDLAGFAVGVVEKDKI 131 (297)
T ss_pred -----------------CHHHHHHHHHHHHHHHHHcCCeEeeecceEcc-C-------cccCCceeEEEEEEEEEecccc
Confidence 13467899999999999999999999995321 1 12 23556679999998766
Q ss_pred cccCCCCCCCEEEEEccCCCcccccHHH--HHHhhhCCCCCccccccccCCCHHHHHHHH---HHHHHHHHhhccCCceE
Q 000572 529 ISKGEPDIGMLVVKIGGPAYRIGMGGGA--ASSMVSGQNDADLDFNAVQRGDAEMAQKLY---RVVRACIEMGETNPIIS 603 (1414)
Q Consensus 529 i~r~~a~~GD~Ivv~G~~~g~~GlgGaa--~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~---~~i~~~~~l~~~~~i~a 603 (1414)
+.+++++|||.|+++|. .|.+|.. +.+....+.........++.+....+..+. ++.+....+.+...+++
T Consensus 132 ~~~~~a~~Gd~I~~tg~----~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~a 207 (297)
T cd02196 132 IDGSKIKPGDVLIGLPS----SGLHSNGYSLVRKILFEEGLDYDDPEPGLGKTLGEELLTPTRIYVKPILPLLEKVLVKG 207 (297)
T ss_pred ccccCCCCCCEEEEccC----cchhhhHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 45677999999999885 3444332 222221111000000111122222222211 11222233334567999
Q ss_pred EEcCCCCcHHHHHHHHhc-CCeEEEEeCCCCCCCC--------CccHHHHhcc-cccceeEEEEcCCCHHHHHHHHHHcC
Q 000572 604 IHDQGAGGNCNVVKEIIY-PKGAEIDIRAIIVGDH--------TLSVLEIWGA-EYQEQDAVLVKPESRDLLQSICERER 673 (1414)
Q Consensus 604 ~~DigaGGL~~aL~Ela~-~~Ga~Idl~~iP~~~~--------~l~p~ei~~s-Esqer~ll~V~pe~~~~l~~i~~~~~ 673 (1414)
|||+|.|||+.+|.||+. ++|++||+++||+.+. +++|.+++.. .++.+|+++|+|++.+++.+++++++
T Consensus 208 ~~DiS~gGL~~~L~e~a~~~~g~~Id~~~iPv~~~~~~~~e~~~~~p~~~~~~~~~g~gll~~v~~~~~~~~~~~l~~~g 287 (297)
T cd02196 208 MAHITGGGLPENLPRVLPEGLGAVIDLGSWEIPPIFKWIQKAGNVSEEEMYRTFNMGIGMVLIVSEEDADEVLEILEKLG 287 (297)
T ss_pred EEeCCCCchhhccHhhccCCceEEEecCCCCCCHHHHHHHHhCCCCHHHHHHHHhCCCCEEEEECHHHHHHHHHHHHhcC
Confidence 999999999999999998 9999999999998642 3344333211 12357999999999999999999999
Q ss_pred CCeEEEEEEE
Q 000572 674 VSMAVIGTIS 683 (1414)
Q Consensus 674 ~~~~vIG~vt 683 (1414)
+++++||+|+
T Consensus 288 i~a~~IG~v~ 297 (297)
T cd02196 288 EKAYVIGEVV 297 (297)
T ss_pred CCeEEEEEEC
Confidence 9999999985
|
The N-terminal domain of PurM is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, selenophosphate synthetase (SelD), and FGAM synthase and is thought to bind ATP. |
| >cd02194 ThiL ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage of exogenous thiamine | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-26 Score=265.68 Aligned_cols=246 Identities=20% Similarity=0.170 Sum_probs=175.8
Q ss_pred CCcCcEEEEEecCCCceEeEEEEccCC----CCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcH
Q 000572 789 ITLADVAVIAQTYTDLTGGACAIGEQP----IKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEG 864 (1414)
Q Consensus 789 ~pg~DaAVi~~~~~~~~gla~s~g~~p----~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~ 864 (1414)
.+++||||++.. ...+++|+|..+ +...+|||.+||+||++|+|||+||||+|+. +..++++ |... +.
T Consensus 22 ~~gdDaavi~~~---~~~lv~t~D~~~~~~~f~~~~~p~~~G~~av~~~~sDi~a~Ga~P~~-~~~~l~~--p~~~--~~ 93 (291)
T cd02194 22 GIGDDAAVLKPP---GGRLVVTTDTLVEGVHFPPDTTPEDIGWKALAVNLSDLAAMGARPLG-FLLSLGL--PPDT--DE 93 (291)
T ss_pred CCCCCEEEecCC---CCeEEEEecccccccCCCCCCCHHHHHHHHHHHHHHHHHHcCCccce-eEEEEEC--CCCC--CH
Confidence 357999999832 357999999753 3344699999999999999999999999976 5555654 5432 35
Q ss_pred HHHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCC
Q 000572 865 AAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKG 944 (1414)
Q Consensus 865 ~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~ 944 (1414)
+++.++++||.++|+++|++++|||++.+. .|++.+|++|.+++. +.+++..+++|| .|++
T Consensus 94 ~~l~~i~~Gi~~a~~~~g~~liGGdt~~~~-----------~~~i~vt~iG~~~~~-~~~~~~~a~~GD--~I~l----- 154 (291)
T cd02194 94 EWLEEFYRGLAEAADRYGVPLVGGDTTSGS-----------ELVISVTALGEVEKG-KPLRRSGAKPGD--LLYV----- 154 (291)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEcccCCCCC-----------CeEEEEEEEEecCCC-CceecCCCCCCC--EEEE-----
Confidence 678889999999999999999999997541 468899999999753 568888889997 4555
Q ss_pred ccccchHHHHHHhhhcCCCCCCCCChHHHHHHH-------HHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEE
Q 000572 945 KRRLGGSALAQVFDQVGNESPDLEDVPYLKRVF-------ETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITL 1017 (1414)
Q Consensus 945 ~~~LGGS~la~~~~~~~~~~p~v~d~~~lk~~~-------~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~I 1017 (1414)
.+.+|.+..+...-+.....+.. ..+.....+ +....+. ++.++||||+|| ||+.+|+|||.++++|++|
T Consensus 155 tg~~G~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~l~-~~~v~a~~DiSd-GL~~~l~ela~~s~~g~~i 231 (291)
T cd02194 155 TGTLGDAAAGLALLLGGLKLPEE-LYEELIERHLRPEPRLELGRALA-EGLATAMIDISD-GLLADLGHIAEASGVGAVI 231 (291)
T ss_pred eCCccHHHHHHHHHhCCCCCChh-hHHHHHHHhcCCCCcHHHHHHHH-hCCCeEEEEchH-hHHHHHHHHHHHcCCeEEE
Confidence 23455544332111101111111 111111111 1222233 367999999999 6999999999999999999
Q ss_pred EeCCCCC-----------chHHHhc--ccccceEEEEecCCHHHHHHHHHHcCCCEEEEEEEe
Q 000572 1018 DLNSEGN-----------SLFQTLF--AEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVN 1067 (1414)
Q Consensus 1018 dl~~~~~-----------~~~~~LF--sE~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~ 1067 (1414)
++++++. +|+..++ +|++++|++|++++. .+.++..++++++||+|+
T Consensus 232 ~~~~ipi~~~~~~~~~~~~p~~~~~~gGedy~ll~~v~~~~~---~~~~~~~~~~~~~IG~v~ 291 (291)
T cd02194 232 DLDKLPLSPALRAAELGEDALELALSGGEDYELLFTVPPENA---EAAAAKLGVPVTVIGRVT 291 (291)
T ss_pred ecccCCCCHHHHhhhcCCCHHHHHhcCCcceEEEEEechhHh---HHHHhhcCCCceEEEEEC
Confidence 9987643 2333333 477889999998875 556777899999999985
|
Thiamine salvage occurs in two steps, with thiamine kinase catalyzing the formation of thiamine phosphate, and ThiL catalyzing the conversion of this intermediate to thiamine pyrophosphate. The N-terminal domain of ThiL binds ATP and is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, FGAM synthase and selenophosphate synthetase (SelD). |
| >TIGR00878 purM phosphoribosylaminoimidazole synthetase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.4e-27 Score=274.14 Aligned_cols=261 Identities=16% Similarity=0.105 Sum_probs=181.4
Q ss_pred CcCcEEEEEecCCCc-eEeEEEEccCCC---CC-CCCHHH-HHHHHHHHHhhchhccCcccccccccccccccccCCCCc
Q 000572 790 TLADVAVIAQTYTDL-TGGACAIGEQPI---KG-LLNPKA-MARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGE 863 (1414)
Q Consensus 790 pg~DaAVi~~~~~~~-~gla~s~g~~p~---~~-~~dP~~-ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e 863 (1414)
.|+||||+++..... ..+++++|.... +. ..+|+. .||+||+.|+|||+||||+|+.. ..++++ + + + +
T Consensus 36 ~GdDaav~~~~~~~~~~~l~~t~D~~g~~~~~~~~~~~~~~~G~~av~~n~sDiaa~Ga~P~~~-~~~l~~--~-~-~-~ 109 (332)
T TIGR00878 36 LGGFAGLFDLGDKYKEPVLVSGTDGVGTKLLVAEAMNKHDTIGIDLVAMNVNDLLVQGAEPLFF-LDYLAV--G-K-L-D 109 (332)
T ss_pred CCCCeEEEEcccccCCceEEEeccccccchHHHHHcCchHHHHHHHHHHHHHHHHHcCCcHHHH-HHHHhc--C-C-C-C
Confidence 589999998864211 579999997411 11 245545 99999999999999999999763 444553 2 2 1 3
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecC--CcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEc
Q 000572 864 GAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAP--GSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDL 941 (1414)
Q Consensus 864 ~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~p--ptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~l 941 (1414)
.+++.++++|+.++|+++|++++||||+.+.. +..+ ..+.+|++|.+++ .+.+++..+++|| +|++ +
T Consensus 110 ~~~~~~i~~Gi~~a~~~~g~~ivGG~t~~~~~-------~~~~~~~~i~~t~iG~~~~-~~~~~~~~a~~GD--~i~l-t 178 (332)
T TIGR00878 110 PEVASQIVKGIAEGCKQAGCALVGGETAEMPG-------MYRGGHYDLAGTAVGVVEK-DEIITGEKVKPGD--VLIG-L 178 (332)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEceeeeECCC-------cccCCceEEEEEEEEEEcC-ccccCccCCCCCC--EEEE-E
Confidence 56788899999999999999999999984321 1111 3566789999976 5788899999997 4455 2
Q ss_pred CCCccccchHHHHH-HhhhcCCC-CCCC--CC-hHHHHH-------HHHHHHHHHhccCceEEEeCCCCchHHHHHHHHh
Q 000572 942 AKGKRRLGGSALAQ-VFDQVGNE-SPDL--ED-VPYLKR-------VFETVQDLIGDELVSTGHDISDGGLLVCTLEMSF 1009 (1414)
Q Consensus 942 g~~~~~LGGS~la~-~~~~~~~~-~p~v--~d-~~~lk~-------~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~ 1009 (1414)
|......+|+.+.. .+...... .+.. .+ ....+. +.+.+..+++.+.++||||||+|||+.+|+|||
T Consensus 179 g~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~p~~~~~~~~~~l~~~~~i~a~~DiS~gGL~~~L~e~~- 257 (332)
T TIGR00878 179 GSSGIHSNGLSLVRKVLEDIAGLDYEDTPEDFGKTLGEELLEPTRIYVKPILELIKEVEVHGLAHITGGGLLENIPRRL- 257 (332)
T ss_pred CCchHHHHHHHHHHHHhhhccccccccccccccchHHHHHhhHhHHHHHHHHHHHhcCCceEEEeCCCccHhhhHHHhc-
Confidence 43211222333332 22211111 1111 00 111121 123456677788899999999999999999998
Q ss_pred cCCeEEEEEeCCCCCchHHHhccc---------------ccceEEEEecCCHHHHHHHHHHcCCCEEEEEEEeC
Q 000572 1010 AGNYGITLDLNSEGNSLFQTLFAE---------------ELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNS 1068 (1414)
Q Consensus 1010 as~~G~~Idl~~~~~~~~~~LFsE---------------~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~ 1068 (1414)
++++|++|+++.++..+...+|+| ..|+|++|++++.+++.+.+++.|+++++||+|++
T Consensus 258 ~sg~g~~I~~~~ipi~~~~~~~~e~~~~~~~e~~~~~~~g~glli~v~~e~~~~~~~~l~~~gi~a~vIG~V~~ 331 (332)
T TIGR00878 258 PDGLKAVIDMSSWPQPPIFKWIQEAGNVEEEEMYRTFNMGVGFVVIVPEEEVDKALALLNARGEKAWVIGEVKK 331 (332)
T ss_pred cCCceEEEecCCCCCCHHHHHHHHCCCCChHHHHHHHhccCCEEEEECHHHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 579999999987654333333333 34589999999999999999999999999999975
|
This enzyme is found as a homodimeric monofunctional protein in prokaryotes and as part of a larger, multifunctional protein, sometimes with two copies of this enzyme in tandem, in eukaryotes. |
| >cd02691 PurM-like2 AIR synthase (PurM) related protein, archaeal subgroup 2 of unknown function | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-26 Score=269.08 Aligned_cols=266 Identities=15% Similarity=0.137 Sum_probs=183.2
Q ss_pred CCCcCcEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHH
Q 000572 788 QITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAM 867 (1414)
Q Consensus 788 ~~pg~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l 867 (1414)
+...||||+++... ..+++++|..++....+|+..||+||+.|+|||+||||+|+. +.+++ +.|.+. +.+++
T Consensus 33 ~~~dDdaa~~~~~~---~~lv~ttDgvh~~~~~~p~~~G~~av~~nvSDIaAmGa~P~~-~l~sl--~lp~~~--~~~~l 104 (346)
T cd02691 33 VAQDDDAGVDAADV---EYIVVAIDGIHSRLSDFPFLAGFHATRAALRDVMVMGARPVA-LLSDI--HLADDG--DVGKL 104 (346)
T ss_pred ccccCceEEEccCC---CeEEEEeCCCCCCcccChHHHHHHHHHHHHHHHHHcCCchHH-hheee--ecCCCC--CHHHH
Confidence 34567888887653 578999997776656799999999999999999999999975 44444 456433 34667
Q ss_pred HHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCccc
Q 000572 868 YDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRR 947 (1414)
Q Consensus 868 ~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~ 947 (1414)
.++++|+.++|+++|++++||||+.+... + ....+..+.+|++|.+++ ..+.+..++||| +|++ .+.
T Consensus 105 ~~i~~Gi~~a~~~~gv~lvGGdT~~~~~~-~---~~~~~l~~svT~iG~~~~--~~~~r~gA~pGD--~I~v-----tg~ 171 (346)
T cd02691 105 FDFTAGVTAVSEATGVPLVAGSTLRIGGD-M---VLGDRLVGGVGAVGRSKS--DPSRRKNAEPGD--LILM-----TEG 171 (346)
T ss_pred HHHHHHHHHHHHHcCCeEEeeeeEEecCC-c---ccCCceEEEEEEEEEecc--ccccccCCCCCC--EEEE-----ECC
Confidence 78999999999999999999999754210 0 011234556899998864 345567789997 5666 234
Q ss_pred cchHH-HH-HHhhhcCCCCCCCCChHHHHHHHHHHHHHHhc---cCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCC
Q 000572 948 LGGSA-LA-QVFDQVGNESPDLEDVPYLKRVFETVQDLIGD---ELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSE 1022 (1414)
Q Consensus 948 LGGS~-la-~~~~~~~~~~p~v~d~~~lk~~~~~v~~l~~~---g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~ 1022 (1414)
+|++. .+ +++... +++-........++..+.+... ..++||||+|||||+.+|.|||.+|++|++|+++++
T Consensus 172 ~Gg~~~~~l~ll~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~v~am~DiSdGGL~~~L~ela~aSgvg~~Id~~~I 247 (346)
T cd02691 172 AGGGTITTTAIYHGM----PDVVEETLNVDFIKACEALRDSGLVSKVHSMTDVTNGGIRGDALEISKTAGVSLVFDEEKV 247 (346)
T ss_pred ccHHHHHHHHHHccc----hhHHHhhccHHHHHHHHHHHHhCCCCCeEEEEcCCCchHHHHHHHHHHHcCCEEEEEhhhC
Confidence 55443 22 222210 1110000001122223333332 358999999999999999999999999999999877
Q ss_pred C--CchH----HHhcc-----cc-cceEEEEecCCHHHHHHHHHHcCCCEEEEEEEeCCCcEEEEECC
Q 000572 1023 G--NSLF----QTLFA-----EE-LGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDG 1078 (1414)
Q Consensus 1023 ~--~~~~----~~LFs-----E~-~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i~~~g 1078 (1414)
+ ..+. ...++ .. .++|++|++++.+++++.+++.++++++||+|++++.+.+..++
T Consensus 248 P~pl~~~v~~~~~~~~~~p~~~~~~~LL~tv~~~~~~~v~~~l~~~g~~~~vIG~V~~~~~~~l~~~~ 315 (346)
T cd02691 248 RSLINPKVLKMLEELGIDPLGVSLDSLMIIAPEEDAVDIIRTLREAGVRADEVGRVEEGRGVPLVVTG 315 (346)
T ss_pred ccccCHHHHHHHHHcCCChhHcccCcEEEEEChHHHHHHHHHHHhcCCCeEEEEEEEeCCceEEEeCC
Confidence 4 2211 11111 11 14799999999999999999999999999999987766664443
|
The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain. |
| >PLN02557 phosphoribosylformylglycinamidine cyclo-ligase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=271.27 Aligned_cols=271 Identities=14% Similarity=0.066 Sum_probs=195.4
Q ss_pred eeccCcceeecCCcccccccCCCCCccccccCCceEEEEEec---ccCCCCC-CCcHH-HHhhcccccccchhccCCCce
Q 000572 359 GFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAE---THNFPCA-VAPYP-GAETGAGGRIRDTHATGRGSF 433 (1414)
Q Consensus 359 g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vE---thn~p~~-idP~~-gA~t~vgg~irDiaAmGrGA~ 433 (1414)
++|||||+++.. +..+ +++++ +|..... ++||. .|+++|+.|+|||++| ||+
T Consensus 84 giGdDaavi~~~-~~~L--------------------V~ttD~vgtk~~~a~~~~~~~~iG~~aVa~nvnDIaam--GA~ 140 (379)
T PLN02557 84 GIGGFGGLFPFG-DSYL--------------------VAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTS--GAK 140 (379)
T ss_pred CCCCCeEEEecC-CCEE--------------------EEEeCCCCCCchhhhhcCcHhhHHHHHHHhHHHHHHHc--CCC
Confidence 799999999732 1122 23333 3433333 78985 8999999999999999 999
Q ss_pred eEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCC
Q 000572 434 VVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLK 513 (1414)
Q Consensus 434 P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~ 513 (1414)
|+++++.+..++ .+.+.++++++|+.+.|+++|++++||||.+...-+ ....
T Consensus 141 P~~~l~~l~~~~----------------------l~~~~l~~i~~Gi~~a~~~~Gv~lVGGdT~~~p~~~------~~~~ 192 (379)
T PLN02557 141 PLFFLDYFATSH----------------------LDVDLAEKVIKGIVDGCQQSDCALLGGETAEMPGFY------AEGE 192 (379)
T ss_pred hHHhheecccCC----------------------CCHHHHHHHHHHHHHHHHHhCCEEEeecceEccCcc------cCCc
Confidence 999998774221 134578999999999999999999999997532110 0123
Q ss_pred ceEEEEEEEeeeCccc-ccCCCCCCCEEEEEccCCCcccccHHHHH--HhhhCCC--CCccc--cccccCCCHHHHH-HH
Q 000572 514 PIMFSGGIGQIDHNHI-SKGEPDIGMLVVKIGGPAYRIGMGGGAAS--SMVSGQN--DADLD--FNAVQRGDAEMAQ-KL 585 (1414)
Q Consensus 514 Plv~~~~vG~v~~~~i-~r~~a~~GD~Ivv~G~~~g~~GlgGaa~s--s~~~~~~--~~~~~--~~~Vq~~~p~~e~-~l 585 (1414)
+.+.++++|.++++++ .+++++|||.|+.+++ .|+|+..++ +...... +.... ...+|.+++.++. ++
T Consensus 193 ~~i~~t~iG~v~~~~~i~~~~akpGD~Iigl~s----sGiHsng~sl~r~~l~~~~~~~~~~~~~~~~~l~e~ll~pt~i 268 (379)
T PLN02557 193 YDLSGFAVGSVKKDAVIDGKNIVAGDVLIGLPS----SGVHSNGFSLVRRVLAKSGLSLKDQLPGASVTIGEALMAPTVI 268 (379)
T ss_pred eeEEEEEEEEEecccccccccCCCCCEEEEecc----cccccchhhhhHHHHHhccccccccccccCccHHHHhhcchHH
Confidence 4567799999988874 5677999999998875 678866433 3222111 10111 1246667777663 22
Q ss_pred HHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc-CCeEEEEeCCCCCCCC--------CccHHHHhcccccc-eeEE
Q 000572 586 YRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY-PKGAEIDIRAIIVGDH--------TLSVLEIWGAEYQE-QDAV 655 (1414)
Q Consensus 586 ~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~-~~Ga~Idl~~iP~~~~--------~l~p~ei~~sEsqe-r~ll 655 (1414)
++++++++.+.+.|++|+|+|+|||...|.||+. ++|++||++++|+.+. +++|.|++-.-+.+ .|++
T Consensus 269 --yv~~vl~l~~~~~V~am~diTgGGl~~~L~e~~~~g~g~~Id~~~~pv~~~f~~i~~~g~i~~~em~~tfN~GiGmv~ 346 (379)
T PLN02557 269 --YVKQVLDIISKGGVKGIAHITGGGFTDNIPRVFPKGLGAKIRTGSWEVPPLFKWLQEAGNIEDAEMRRTFNMGIGMVL 346 (379)
T ss_pred --HHHHHHHHhhcCCeEEEEcCCcchHhhhhHHHhcCCeeEEEeCCCCCCCHHHHHHHHhCCCCHHHHHHhcCCcccEEE
Confidence 3566666666678999999999999999999998 9999999999998764 57777665111223 5999
Q ss_pred EEcCCCHHHHHHHHHHcCCCeEEEEEEEcCCeEE
Q 000572 656 LVKPESRDLLQSICERERVSMAVIGTISGEGRVV 689 (1414)
Q Consensus 656 ~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~ 689 (1414)
+|+|++.+++.+. .+.++++||+|+++.++.
T Consensus 347 ~V~~~~a~~~l~~---~~~~a~~IG~V~~~~~v~ 377 (379)
T PLN02557 347 VVSPEAADRILEE---GAYPAYRIGEVINGEGVV 377 (379)
T ss_pred EECHHHHHHHHHh---cCCCeEEEEEEEcCCceE
Confidence 9999998887776 358899999999765543
|
|
| >PRK14105 selenophosphate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=271.83 Aligned_cols=266 Identities=17% Similarity=0.166 Sum_probs=180.8
Q ss_pred CCceeeeccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCce
Q 000572 354 NNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSF 433 (1414)
Q Consensus 354 ~~~~~g~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~ 433 (1414)
+.+++|+||||||++.. +..+++++++ .+|...+||..|++++..|+|||+|| ||+
T Consensus 40 ~~~~~g~gDDaAvi~~~---------------------~~~lv~t~D~-f~~~~~~p~~~G~~av~~nlSDiaAm--Ga~ 95 (345)
T PRK14105 40 KHTKVGLGDDAAVIIKN---------------------GLAIVKTVDV-FTPIVDDPYIQGKIAACNSTSDVYAM--GLS 95 (345)
T ss_pred cccccCCCCceEEEeeC---------------------CeEEEEEecC-CCCCcCCHHHHHHHHHHHHHHHHHHc--CCc
Confidence 45678999999999631 2234456665 35666799999999999999999999 997
Q ss_pred -eEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccC
Q 000572 434 -VVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWL 512 (1414)
Q Consensus 434 -P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~ 512 (1414)
|++++.++.+ |+. .+.++++++++|+.+.|++||++++||||.. ..
T Consensus 96 ~p~~~~~~l~l-----P~~----------------~~~~~l~~i~~Gi~~~~~~~gv~lvGGdT~~------------~~ 142 (345)
T PRK14105 96 EIIGVLVILGI-----PPE----------------LPIEVAKEMLQGFQDFCRENDTTIIGGHTIL------------NP 142 (345)
T ss_pred cHHHHHhhhcC-----CCC----------------CCHHHHHHHHHHHHHHHHHhCCEEEeeeecc------------CC
Confidence 8999999974 432 1456889999999999999999999999952 23
Q ss_pred CceEEEEEEEeeeCcc-cccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCc--cccccccCCCHHHHHHHHHH-
Q 000572 513 KPIMFSGGIGQIDHNH-ISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAD--LDFNAVQRGDAEMAQKLYRV- 588 (1414)
Q Consensus 513 ~Plv~~~~vG~v~~~~-i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~--~~~~~Vq~~~p~~e~~l~~~- 588 (1414)
.|++..+++|..++++ +.|++++|||.|+++|. +|.+++............. +..... ....+..++.+
T Consensus 143 ~~~l~~svtg~g~~~~~i~r~ga~~GD~I~vTg~----lG~~~~~~l~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 215 (345)
T PRK14105 143 WPLIGGAVTGVGKEEDILTKAGAKEGDVLILTKP----LGTQSAMALSRVPEEFEDLIDITKEEK---EYIINKAIELMT 215 (345)
T ss_pred CCEEEEEEEEEEcccceeeCCCCCCCCEEEEeCC----ChHHHHHHHHhcchhhhhhccCCHHHH---HHHHHHHHHHHH
Confidence 4555444455555555 56788999999999884 6776543222221110000 000000 00000000000
Q ss_pred ------HHHHHHhhc---cCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCCCccHHHHh---cc-----cc
Q 000572 589 ------VRACIEMGE---TNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIW---GA-----EY 649 (1414)
Q Consensus 589 ------i~~~~~l~~---~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~~l~p~ei~---~s-----Es 649 (1414)
.....++.. .+.+++|||+|.|||+.+|.||++ ++|++|+ +||+.+......+.+ +. ++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~a~~DiSdgGL~~~L~ela~aS~v~i~i~--~iPi~~~~~~~~~~~~~~l~~g~~~~s 293 (345)
T PRK14105 216 TSNRYALLALREAEEEVGEKIANAMTDVTGFGILGHSQEMAEQSNVEIEIS--TLPVIKGTPELSSLFGHALLDGYGAET 293 (345)
T ss_pred hhhHHHHHHHHHhhhccccCCeeEEEcCCCchHHHHHHHHHhhCCCeEEEE--ccCCchhHHHHHHHhcccccCCCCCcc
Confidence 111111111 246899999998899999999999 7777775 999877532212211 11 12
Q ss_pred cceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcC
Q 000572 650 QEQDAVLVKPESRDLLQSICERERVSMAVIGTISGE 685 (1414)
Q Consensus 650 qer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~ 685 (1414)
...++|+++|++.+++.+.+++.++++++||+|+++
T Consensus 294 sGgLl~tv~~e~~~~~~~~l~~~g~~~~~IG~V~~~ 329 (345)
T PRK14105 294 AGGLLISVKPEYKDKLIDKLEKNNVYAFEVGKVVKN 329 (345)
T ss_pred cCeEEEEecHHHHHHHHHHHHhCCCCceEEEEEEeC
Confidence 234999999999999999999999999999999864
|
|
| >PRK05297 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=306.03 Aligned_cols=294 Identities=13% Similarity=0.055 Sum_probs=230.5
Q ss_pred CcCcEEEEEec----------C------CCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhcc--Ccccccccccc
Q 000572 790 TLADVAVIAQT----------Y------TDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWA--KVTSLSHVKAS 851 (1414)
Q Consensus 790 pg~DaAVi~~~----------~------~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~--Ga~Pl~~v~ls 851 (1414)
++++++|++.. . .....+++.+..|.+.+.++||.||...+...+||+.+| ||+|++-. .+
T Consensus 252 ~~dna~vi~~~~~~~~~~~~~~~~~~~~~e~~~~~fK~ETHNhPsaiePf~GAaTG~GG~iRD~~~~G~Ga~piag~-~~ 330 (1290)
T PRK05297 252 YKDNAAVMEGSKVGRFFPDPDTGRYGYHQEPAHILMKVETHNHPTAISPFPGAATGSGGEIRDEGATGRGSKPKAGL-TG 330 (1290)
T ss_pred ecCCcEEEEcccccccccccccccccccccceEEEEEeccCCCCCccCCCCcccccCCceeccccccCCCCeeeecc-ee
Confidence 45788888743 0 113678999999999999999999999999999999999 99997643 23
Q ss_pred cccccccCCCC----------cH-------HHHHHHHHHHHHHHHHhCCcccccccccccccccCC---ceeecCCcEEE
Q 000572 852 GNWMYAAKLDG----------EG-------AAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGG---EVVKAPGSLVI 911 (1414)
Q Consensus 852 ~n~~~p~~~~~----------e~-------~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~---~~v~~pptlvi 911 (1414)
+-|+.+. .++ .+ ..+.+.+.|++++|+++|+|++||++|+|+++..++ ..-.+.|++.+
T Consensus 331 ~~~~~l~-~~~~~~~~e~~~~~P~~~~~p~~i~~~~~~Gis~~gn~~G~Pvv~G~Vs~yne~~~~~~~~~~~~i~P~~~v 409 (1290)
T PRK05297 331 FSVSNLR-IPGFEQPWEEDYGKPERIASALDIMIEGPLGGAAFNNEFGRPNLLGYFRTFEQKVNSHNEEVRGYHKPIMLA 409 (1290)
T ss_pred EEecCCC-CCCCCCccccccCCccccCCHhHhhhhccccHHHHhhhhCCCccceEEEEEeccccCccccccccccceEEE
Confidence 3333331 111 01 245567779999999999999999999998742010 01234789999
Q ss_pred EEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCcc--ccchHHHHHH-hhhcC-----CCCCCCCChHHHHHHHHHHHHH
Q 000572 912 SVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKR--RLGGSALAQV-FDQVG-----NESPDLEDVPYLKRVFETVQDL 983 (1414)
Q Consensus 912 ta~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~--~LGGS~la~~-~~~~~-----~~~p~v~d~~~lk~~~~~v~~l 983 (1414)
+++|.+++ +++.+..+ ++|| .||++ |...+ .+|||.++.. .+... +.+|.. |++.+|++.+.+..+
T Consensus 410 g~vG~i~~-~~~~~~~~-~~Gd-~Ivll--G~~~~rdglgGs~~ss~~~g~~~~~~~~~~Vq~~-d~~~ek~~~~~i~~~ 483 (1290)
T PRK05297 410 GGIGNIRA-DHVQKGEI-PVGA-KLIVL--GGPAMRIGLGGGAASSMASGQSSEDLDFASVQRG-NPEMERRCQEVIDRC 483 (1290)
T ss_pred EEEEEEeh-hhccccCC-CCCC-EEEEE--CCCCCCCCccHHHHHHHHhcccccccccCCCCcC-CHHHHHHHHHHHHHH
Confidence 99999987 56655554 7897 45554 65444 8999987653 34333 455666 889999988888776
Q ss_pred Hh---ccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCC-----CchHHHhcccccce-EEEEecCCHHHHHHHHH
Q 000572 984 IG---DELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEG-----NSLFQTLFAEELGL-VLEVSKSNLDTVSKKLH 1054 (1414)
Q Consensus 984 ~~---~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~-----~~~~~~LFsE~~G~-vl~V~~~~~~~v~~~l~ 1054 (1414)
+. .++|+|+||+|+|||+.+|+|||+++++|++|++++++ .++.+.||||++++ +++|++++.++|+++++
T Consensus 484 ~~~~~~~lI~s~hDvgaGGLa~AL~Ema~~~g~G~~idL~~vp~~~~~l~p~eil~SESQeRmlv~V~~e~~e~~~~i~~ 563 (1290)
T PRK05297 484 WQLGDDNPILSIHDVGAGGLSNAFPELVNDGGRGGRFDLRKIPNDEPGMSPLEIWCNESQERYVLAIAPEDLELFEAICE 563 (1290)
T ss_pred HHhcccCCeeEEecCCccHHHHHHHHHHHhcCceEEEEeCCCccccCCCCHHHHHhccccceEEEEEcchhHHHHHHHHH
Confidence 65 48999999999999999999999999999999999864 46788999999997 88999999999999999
Q ss_pred HcCCCEEEEEEEeCCCcEEEEE--CCEEEEeccHHHHHH
Q 000572 1055 DAGVSAEIIGQVNSSHSVEIKV--DGLTHLNEKTSLLRD 1091 (1414)
Q Consensus 1055 ~~gi~~~~IG~v~~~~~l~i~~--~g~~i~~~~~~~L~~ 1091 (1414)
+.++++++||+|++++.+++.. +|+.+++++++.|..
T Consensus 564 ~~~l~~~vIG~vt~~~~l~v~~~~~g~~~vdl~~~~L~~ 602 (1290)
T PRK05297 564 RERCPFAVVGEATEERHLTLEDSHFDNKPVDLPLDVLLG 602 (1290)
T ss_pred hcCCCEEEEEEEeCCCeEEEEecCCCceEEEEEHHHhcC
Confidence 9999999999999988888874 677788999988853
|
|
| >PRK00943 selenophosphate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=266.52 Aligned_cols=255 Identities=18% Similarity=0.111 Sum_probs=184.1
Q ss_pred cCCCCCCcCcEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCc
Q 000572 784 VGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGE 863 (1414)
Q Consensus 784 vGp~~~pg~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e 863 (1414)
+||. .+|||||+++..+ ..+++|+|..++ ...+||..||+||+.|+|||+||||+|+. +.++ +++|... -+
T Consensus 44 ~g~~--~gdDaavi~~~~~--~~lv~t~D~~~p-~~~~p~~~G~~Av~~~~sDiaAmGa~P~~-~l~~--l~lp~~~-~~ 114 (347)
T PRK00943 44 VGNE--TRDDAAVYDLNDG--TGIISTTDFFMP-IVDDPFDFGRIAATNAISDIYAMGGKPIM-AIAI--LGWPINK-LP 114 (347)
T ss_pred ecCC--CCCceEEEEeCCC--cEEEEEcccCCC-CCCCHHHHHHHHHHHHhhHhhccCccHHh-Hhhe--eecCccc-Cc
Confidence 5664 4799999988753 568999998633 34699999999999999999999999975 3333 4456421 13
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCC
Q 000572 864 GAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAK 943 (1414)
Q Consensus 864 ~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~ 943 (1414)
.+++.++++|+.++|+++|++++||||..+ . .+.+.+|++|.++. .+.+++..+++|| +|++
T Consensus 115 ~~~l~~i~~Gi~~~~~~~gv~lvGGdT~~~-------~----~~~i~~t~~G~~~~-~~~l~~~~ak~GD--~Iiv---- 176 (347)
T PRK00943 115 PEVAREVLEGGRAACRQAGIPLAGGHSIDA-------P----EPIFGLAVTGVVPP-ERVKRNATAQAGD--KLFL---- 176 (347)
T ss_pred HHHHHHHHHHHHHHHHHcCCceecccccCC-------C----CceEEEEEEEEEcC-CceeeCCCCCCCC--EEEE----
Confidence 466788999999999999999999998522 0 23678899999875 4678898899997 5566
Q ss_pred CccccchHHHHHHhhhcCCCCCCCCChHHHHHHH----HHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEe
Q 000572 944 GKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVF----ETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDL 1019 (1414)
Q Consensus 944 ~~~~LGGS~la~~~~~~~~~~p~v~d~~~lk~~~----~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl 1019 (1414)
.+.+|.+.+...... + ... .++.+.+.+.. .....+.....|+||||+|+|||+++|.|||.+|++|++|++
T Consensus 177 -tg~iG~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~l~~~~~~l~~~~~v~a~~DiT~gGL~~~L~ela~~s~~g~~Id~ 252 (347)
T PRK00943 177 -TKPLGIGILTTAEKK-S-KLK-PEHYGLAIEAMCQLNRPGADFAKLPGVHAMTDVTGFGLLGHLLEMCQGAGLTARVDY 252 (347)
T ss_pred -eCCccHHHHHHHHHh-c-CCC-HHHHHHHHHHHHHhhhHHHHHhccCCCeEEEecCCchHHHHHHHHHHhcCCeEEEec
Confidence 245676554432211 1 111 10112222221 112223334568999999999999999999999999999999
Q ss_pred CCCCCchH-------------------------------H--Hhc--ccccceEEEEecCCHHHHHHHHHHcCCCEEEEE
Q 000572 1020 NSEGNSLF-------------------------------Q--TLF--AEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIG 1064 (1414)
Q Consensus 1020 ~~~~~~~~-------------------------------~--~LF--sE~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG 1064 (1414)
+++|..+. . .|| .-+.|+|++|+|++.+++++.+++.|+++++||
T Consensus 253 d~iPi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgGll~~v~~~~a~~v~~~l~~~g~~a~vIG 332 (347)
T PRK00943 253 AAVPLLPGVEEYIAQGCVPGGTGRNFASYGHLIGELPDEQRALLCDPQTSGGLLVAVAPEAEAEVLAIAAEHGIELAAIG 332 (347)
T ss_pred ccCCCChhHHHHHHcCCCCchhhhHHHHhhccccccCHHHHhhccCcccCccEEEEeCHHHHHHHHHHHHhcCCCeEEEE
Confidence 98753211 0 011 113468999999999999999999999999999
Q ss_pred EEeCC
Q 000572 1065 QVNSS 1069 (1414)
Q Consensus 1065 ~v~~~ 1069 (1414)
+|+++
T Consensus 333 ~V~~~ 337 (347)
T PRK00943 333 ELVEA 337 (347)
T ss_pred EEEcC
Confidence 99865
|
|
| >COG2144 Selenophosphate synthetase-related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-26 Score=250.35 Aligned_cols=253 Identities=21% Similarity=0.193 Sum_probs=188.8
Q ss_pred CcCcEEEEEecCCCceEeEEEE-ccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHHH
Q 000572 790 TLADVAVIAQTYTDLTGGACAI-GEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMY 868 (1414)
Q Consensus 790 pg~DaAVi~~~~~~~~gla~s~-g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~ 868 (1414)
-|||||||++.++ .++++. |.-+.+...||+..||++|.++++||+|||++|+..++. .+.+ ..++-.
T Consensus 42 ~GDDAavI~v~~~---~lliaadGi~g~l~~~dPw~aG~csvLVn~~DV~amGG~Pv~~vd~----isa~----s~d~~~ 110 (324)
T COG2144 42 FGDDAAVIRVGDG---KLLIAADGIWGKLIDADPWWAGYCSVLVNVNDVAAMGGEPVGAVDA----ISAK----SEDQAR 110 (324)
T ss_pred cCCceEEEeeCCc---EEEEecCCccccccccCchhhhceeEEEeehhhhhhCCcceEEEEe----eecC----CHHHHH
Confidence 3899999999842 455554 567888999999999999999999999999999876643 2331 235677
Q ss_pred HHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEE-EcCCCccc
Q 000572 869 DAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHI-DLAKGKRR 947 (1414)
Q Consensus 869 ~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v-~lg~~~~~ 947 (1414)
++++||++.++.|||||+|||+.- ++. +..+. +++|.+.+.+.+++...+++|| .+|++ |+. ++.
T Consensus 111 ei~eglr~~a~kfgvpivGGhthp---------d~~-y~vl~-v~i~gl~~~e~Ii~s~~Ak~GD-~lI~~~d~~-g~~- 176 (324)
T COG2144 111 EILEGLRKGARKFGVPIVGGHTHP---------DTP-YCVLD-VVIGGLIAEEPIITSGTAKPGD-LLIFVGDLD-GKP- 176 (324)
T ss_pred HHHHHHHHHHHhcCCceecCccCC---------CCC-Cceee-eEEecccccccccccCCCCcCC-EEEEEeccC-CCc-
Confidence 899999999999999999998731 121 33444 4444444556788899999998 56665 221 110
Q ss_pred cchHHHHHHhhhcCCCCCCCCChHHHHHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCC----
Q 000572 948 LGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEG---- 1023 (1414)
Q Consensus 948 LGGS~la~~~~~~~~~~p~v~d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~---- 1023 (1414)
.-+ +- +....-....++.++.+++.++++++ ++.|+.|+|.||++++|++|+.+|++|+.++++++|
T Consensus 177 -~p~-----~P-~~wDttt~ka~~~~~~~~e~l~e~a~--l~~AgKDvS~gG~iGtl~mlle~S~~ga~vdl~siP~p~~ 247 (324)
T COG2144 177 -YPN-----FP-LNWDTTTMKAKEKFRAQLELLREGAK--LVKAGKDVSNGGLLGTLLMLLEKSRVGAGVDLDSIPYPAD 247 (324)
T ss_pred -CCC-----CC-ccccceeeccHHHHHHHHHHHHHHHH--HHhhcccccCccHHHHHHHHHHhhccCceeeecccCCccc
Confidence 000 00 00011112245678888888888877 899999999999999999999999999999999875
Q ss_pred CchHHHhcc-cccceEEEEecCCHHHHHHHHHHcCCCEEEEEEEeCCCcEEEEE
Q 000572 1024 NSLFQTLFA-EELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKV 1076 (1414)
Q Consensus 1024 ~~~~~~LFs-E~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i~~ 1076 (1414)
.|...+|-. ..+|+|++|+|++++++.+.|.+.|+++++||+|.+++.++|..
T Consensus 248 vd~~~wlk~ypg~gfv~~v~pe~veev~~v~~~~g~~a~~~GeVie~~~L~i~~ 301 (324)
T COG2144 248 VDFRQWLKRYPGSGFVLTVDPEDVEEVVDVFEEEGCPATVIGEVIEEPVLRIGD 301 (324)
T ss_pred ccHHHHHHhCCCCcEEEEeCHHHHHHHHHHHHHcCCceEEEEEeccCceEEEec
Confidence 232333322 45578999999999999999999999999999999999887653
|
|
| >PRK05385 phosphoribosylaminoimidazole synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-26 Score=267.47 Aligned_cols=258 Identities=16% Similarity=0.104 Sum_probs=181.8
Q ss_pred CcCcEEEEEecCC-CceEeEEEEccCCC-----CCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCc
Q 000572 790 TLADVAVIAQTYT-DLTGGACAIGEQPI-----KGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGE 863 (1414)
Q Consensus 790 pg~DaAVi~~~~~-~~~gla~s~g~~p~-----~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e 863 (1414)
.||||||+++..+ .+..+++++|.... +...+|+..||+||++|+|||+||||+|+..+ .++++ +. .+
T Consensus 36 iGdDaav~~~~~~~~~~~lv~t~D~~~~~~~~~~~~~~~~~iG~~av~~n~sDIaamGa~P~~~~-~~l~~--~~---~~ 109 (327)
T PRK05385 36 LGGFGGLFDLPKGYKEPVLVSGTDGVGTKLKLAIDLGKHDTIGIDLVAMCVNDLLVQGAEPLFFL-DYIAT--GK---LD 109 (327)
T ss_pred CcCccEEEecccccCCcceeeccccccchhHHHHHhCCHhhHHHHHHHHHHHHHHHcCCCHHHHH-HHHhc--CC---CC
Confidence 5799999987421 12468999996311 12235789999999999999999999997643 45553 32 13
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccccccccCCceee--cCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEc
Q 000572 864 GAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVK--APGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDL 941 (1414)
Q Consensus 864 ~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~--~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~l 941 (1414)
.+++.++++|+.++|+++|++++||||+.+.. +. ..+.+.+|++|.++. .+.+++..+++|| . |++ +
T Consensus 110 ~~~~~~~~~Gi~~~~~~~g~~ivGGdt~~~~~-------~~~~~~~~i~~t~~G~~~~-~~~~~r~~a~~GD-~-I~~-t 178 (327)
T PRK05385 110 PEVAAQVVKGIAEGCEQAGCALIGGETAEMPG-------MYHEGDYDLAGFAVGVVEK-DKIIDGSKVKEGD-V-LIG-L 178 (327)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEeCccceECCC-------cccCCCeeEEEEEEEEEec-ccccCcCCCCCCC-E-EEE-e
Confidence 56778899999999999999999999964421 11 124677899999875 5678899999998 4 444 2
Q ss_pred CCCccccchH-HHH-HHhhhcCCCC--CCCCChHHH-------HHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhc
Q 000572 942 AKGKRRLGGS-ALA-QVFDQVGNES--PDLEDVPYL-------KRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFA 1010 (1414)
Q Consensus 942 g~~~~~LGGS-~la-~~~~~~~~~~--p~v~d~~~l-------k~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~a 1010 (1414)
+ ..+.+|++ .+. +.+....... ......... +...+.+..+.+++.++||||||||||+.+|+||| +
T Consensus 179 g-~~G~~g~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~l~~~~~v~a~~DiSdgGL~~~L~eia-~ 256 (327)
T PRK05385 179 A-SSGLHSNGYSLVRKILEVLDLDDTLPELDGKTLGEELLEPTRIYVKPVLALLKEVDVKGMAHITGGGFIENLPRVL-P 256 (327)
T ss_pred C-CcchhhhHHHHHHHHHHhccccccccccccchHHHHHhhhhHHHHHHHHHHHhcCCceEEEeCCCchHhhhhHHhc-C
Confidence 3 23444433 222 3322100000 000000111 22224455567777899999999999999999999 9
Q ss_pred CCeEEEEEeCCCCCc-------------hHH--HhcccccceEEEEecCCHHHHHHHHHHcCCCEEEEEEE
Q 000572 1011 GNYGITLDLNSEGNS-------------LFQ--TLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQV 1066 (1414)
Q Consensus 1011 s~~G~~Idl~~~~~~-------------~~~--~LFsE~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v 1066 (1414)
|++|++|++++++.. +.. .+|++.+|+|++|++++.+++.+.+++.|+++++||+|
T Consensus 257 sgvg~~Id~~~iP~~~~~~~~~~~~~~~~~~~~~~~~~G~~Ll~tv~~~~~~~l~~~l~~~g~~~~~IG~v 327 (327)
T PRK05385 257 EGLGAEIDKGSWPVPPIFKWLQKLGNVEEEEMYRTFNMGIGMVLIVPPEDADAALALLEAAGEDAWVIGRV 327 (327)
T ss_pred CCceEEEecCCCCCCHHHHHHHHcCCCCHHHHHHHHhcCCcEEEEECHHHHHHHHHHHHhcCCCceEEEEC
Confidence 999999999886522 222 26777777999999999999999999999999999986
|
|
| >COG0046 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=276.74 Aligned_cols=314 Identities=15% Similarity=0.172 Sum_probs=258.1
Q ss_pred CCCCCcchhhhhccccccCcccccccccCCCCCCcCcEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhc
Q 000572 757 LPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTN 836 (1414)
Q Consensus 757 ~p~VaSK~~l~~~~D~~V~g~tv~~p~vGp~~~pg~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsd 836 (1414)
|-.--|-+.+.++|..+..+-.+. +.|++||+|+++.++ ..+++.+..|...++++||.||...|...+||
T Consensus 56 HC~yKssk~~lk~~~~t~~~~~vi-------~g~gdnAgvvdi~d~--~~v~fKvESHNHPSaIePy~GAATGvGGiIRD 126 (743)
T COG0046 56 HCSYKSSKSLLKMFPTTHTGEYVL-------SGPGDNAGVVDIGDG--WAVVFKVESHNHPSAIEPYQGAATGVGGIIRD 126 (743)
T ss_pred hcCccchHHHHhhCCCCCCCCeEE-------EcccCCcceEEeCCc--EEEEEEeccCCCCCccCCCCCcccccCceeec
Confidence 555555566677888775444443 457899999999875 78999999999999999999999999999999
Q ss_pred hhccCcccccccccccccccccCCCCcHHHH-HHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEE
Q 000572 837 LVWAKVTSLSHVKASGNWMYAAKLDGEGAAM-YDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYV 915 (1414)
Q Consensus 837 laa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l-~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G 915 (1414)
+.+|||+|++.+ -++-|+.|.. + +..++ ...+.|++++-.++|+|.+||-+.++..+. ..|.+.+.++|
T Consensus 127 v~smGArPiA~l-~~l~fG~~~~-~-~~~~i~~gvv~Gia~YGN~iGvPtv~Ge~~fd~~y~-------~npLvna~~vG 196 (743)
T COG0046 127 VLSMGARPIALL-DSLRFGIPDI-E-KTRYIMKGVVAGIAAYGNEIGVPTVGGEFRFDESYV-------GNPLVNAGCVG 196 (743)
T ss_pred ccccCceeeeee-cccccCCCCC-c-hhhhHHhccccchhhcCccccccccceEEEEccccC-------CCceEEEEEee
Confidence 999999998744 4567775432 2 22333 358999999999999999999988775431 23566778899
Q ss_pred EcCCCCcccCCCccCCCCcEEEEEEcCCCccccchHHHHH-Hhhh--cCCCCC--CCCChHHHHHHHHHHHHHHhccCce
Q 000572 916 TCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQ-VFDQ--VGNESP--DLEDVPYLKRVFETVQDLIGDELVS 990 (1414)
Q Consensus 916 ~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~LGGS~la~-~~~~--~~~~~p--~v~d~~~lk~~~~~v~~l~~~g~v~ 990 (1414)
.+.. .++.+.....+|+ .||++....++..+||+.++. .+++ ....-| ++.||...|.+.+++.++++.++|.
T Consensus 197 ~i~~-~~i~~~~a~~~G~-~li~~Gg~TgrDGigGat~aS~~~~~~~~e~dr~aVQvGdPf~Ek~l~ea~le~~~~~~I~ 274 (743)
T COG0046 197 LIRK-EHIVKGEAIGPGD-KLILLGGKTGRDGIGGATFASMELGEESEEEDRPSVQVGDPFMEKRLQEAILECVQTGLIK 274 (743)
T ss_pred ecch-hheeeccCCCCCC-EEEEEcCCccccccCchhhhhhhhCcchhhhcCCccccCChHHHHHHHHHHHHHHhcCCeE
Confidence 9875 5666666678998 688885445788899988875 3441 111223 4568899999999999999999999
Q ss_pred EEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCC-----CchHHHhcccccce-EEEEecCCHHHHHHHHHHcCCCEEEEE
Q 000572 991 TGHDISDGGLLVCTLEMSFAGNYGITLDLNSEG-----NSLFQTLFAEELGL-VLEVSKSNLDTVSKKLHDAGVSAEIIG 1064 (1414)
Q Consensus 991 A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~-----~~~~~~LFsE~~G~-vl~V~~~~~~~v~~~l~~~gi~~~~IG 1064 (1414)
++||+..|||..++.||+..++.|++|+|++++ ..|++.+.||++.+ ++.|.|+++++|.+++++.++++.+||
T Consensus 275 ~i~DlGAgGLs~A~~Ela~~gg~G~~i~Ld~VP~rE~gMsp~Ei~~SESQERMllvv~p~~~e~~~~i~~k~~l~~aVVG 354 (743)
T COG0046 275 GIQDLGAGGLSCAISELAAKGGLGAEIDLDKVPLREPGMSPYEIWLSESQERMLLVVAPEDVEEFLEICEKERLPAAVVG 354 (743)
T ss_pred EEeccCCchhhhhHHHHHhccCCeEEEEhhcCcccCCCCCHHHHHHhccchheEEEEccccHHHHHHHHHHcCCCeEEEE
Confidence 999999999999999999999999999999874 67899999999997 889999999999999999999999999
Q ss_pred EEeCCCcEEEEECCEEEEeccHHHHHH
Q 000572 1065 QVNSSHSVEIKVDGLTHLNEKTSLLRD 1091 (1414)
Q Consensus 1065 ~v~~~~~l~i~~~g~~i~~~~~~~L~~ 1091 (1414)
+||+++.+++.++|+.+++++++-|..
T Consensus 355 ~vT~~~~~~~~~~ge~v~dlP~~~L~~ 381 (743)
T COG0046 355 EVTDEPRLVVDWKGEPVVDLPIDVLAG 381 (743)
T ss_pred EEecCceEEEEECCCEEEeccHHHHcC
Confidence 999999999999999999999998875
|
|
| >TIGR00476 selD selenium donor protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=265.74 Aligned_cols=265 Identities=15% Similarity=0.105 Sum_probs=183.9
Q ss_pred CCCceee--eccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCC
Q 000572 353 PNNSVIG--FKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGR 430 (1414)
Q Consensus 353 ~~~~~~g--~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGr 430 (1414)
.+.+++| +||||||++..+ +..+++++++ ++|...+||..|++++..|+|||+||
T Consensus 40 ~~~~~~g~~~gDDaAvi~~~~--------------------~~~lv~ttD~-~~p~~~~p~~~G~~av~~~lsDiaam-- 96 (347)
T TIGR00476 40 DDNQLVGAVMGDDAVIYLRHN--------------------GLSLVQTTDY-ITPIVDDPYMMGRIAAANALSDIYAM-- 96 (347)
T ss_pred CCceeecCCCCCCeEEEEecC--------------------CeEEEEEecc-CCCCccCHHHHHHHHHHHHHHhhhhc--
Confidence 3577888 999999997432 3345556665 35777899999999999999999999
Q ss_pred CceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccc
Q 000572 431 GSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRRE 510 (1414)
Q Consensus 431 GA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~ 510 (1414)
||+|+++++.+.+. |+. .+.++++++++|+.+.|+++|++++||||.+
T Consensus 97 Ga~P~~~l~~~~~~----~~~----------------~~~~~l~~i~~Gi~~~~~~~g~~lvGGdT~~------------ 144 (347)
T TIGR00476 97 GGTPIDAMLILLGV----SNK----------------LTIEVMREVIQGFKDACREAGTSLTGGHTIL------------ 144 (347)
T ss_pred CchHHHHHhhccCC----CCC----------------CCHHHHHHHHHHHHHHHHHcCCCeEeeeeec------------
Confidence 99999988665431 211 1356789999999999999999999999952
Q ss_pred cCCceEEEEEEEeeeCcc-cccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHH----HHH-
Q 000572 511 WLKPIMFSGGIGQIDHNH-ISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEM----AQK- 584 (1414)
Q Consensus 511 ~~~Plv~~~~vG~v~~~~-i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~----e~~- 584 (1414)
.+.|.+.++++|.+++++ +.+++++|||.|+++|. +|++............ . ......++. +..
T Consensus 145 ~~~~~i~~t~~G~~~~~~~i~~~~ak~GD~Iiltg~----lG~~~~~~~~~~l~~~-~-----~~~~~~~~~~~~~~~~~ 214 (347)
T TIGR00476 145 NPWPVFGGAVTGVCPEEEVITPSGAQVGDVLILTKP----LGTQVAVAVHKWLDIP-K-----DLSITKEEVELAINEAI 214 (347)
T ss_pred CCcCEEEEEEEEEECccceecCCCCCCCCEEEEECC----ccHHHHHHHHHHhhcc-c-----ccccCcHHHHHHHHHHH
Confidence 235666778899887766 46778999999999884 5664332221211110 0 000011111 111
Q ss_pred --HHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCCCcc-------HH-H--Hhcccc-
Q 000572 585 --LYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLS-------VL-E--IWGAEY- 649 (1414)
Q Consensus 585 --l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~~l~-------p~-e--i~~sEs- 649 (1414)
..++.+....+.....+++|||+|.|||..+|.||++ ++|++||+++||+.+.... |+ + -++++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~v~a~~DiT~gGL~~~L~~ia~~sg~g~~I~~~~iPi~~~~~~~~~~~~~~~~~~~~~~~~G~ 294 (347)
T TIGR00476 215 ENMARLNRKAAGLMHTFNAHAATDITGFGILGHAQNMAKNSNVEARIVIENLPVLAKMEELSKLCGNPFGLMHGTCPEGG 294 (347)
T ss_pred HHHhHHHHHHHHHHhhCCceEEEeccCccHHHHHHHHHhcCCCeEEEEeCCCCCchhHHHHHHcCCCChHHHhhhhhccC
Confidence 1111111112223446999999999999999999997 8999999999998764111 11 0 011211
Q ss_pred -----------------c--ceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEE
Q 000572 650 -----------------Q--EQDAVLVKPESRDLLQSICERERVSMAVIGTI 682 (1414)
Q Consensus 650 -----------------q--er~ll~V~pe~~~~l~~i~~~~~~~~~vIG~v 682 (1414)
| .-++++++|+..+++++.+++.++++++||+|
T Consensus 295 ~l~~~~~~~~~~~~~~~~~~g~~l~~v~~~~~~~~~~~~~~~~~~~~~ig~v 346 (347)
T TIGR00476 295 GLLSCLPREKAALLCDPIKSGGYLFGVQAEIIGIVEKTATERIIDKPRIGEV 346 (347)
T ss_pred CcccCCCHHHHHHhcCchhccCcccccCHHHHHHHHHHHHhcCCCCCeEEEe
Confidence 0 12578999999999999999999999999997
|
In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelD, known as selenophosphate synthetase, selenium donor protein, and selenide,water dikinase. SelD provides reduced selenium for the selenium transferase SelA. This protein itself contains selenocysteine in many species; any sequence not aligning to the beginning of the model is likely have selenocysteine residue incorrectly interpreted as a stop codon upstream of the given sequence. The SelD protein also provides selenophosphate for the enzyme tRNA 2-selenouridine synthase, which catalyz |
| >cd06061 PurM-like1 AIR synthase (PurM) related protein, subgroup 1 of unknown function | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=260.21 Aligned_cols=248 Identities=18% Similarity=0.186 Sum_probs=175.7
Q ss_pred CcCcEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHHHH
Q 000572 790 TLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYD 869 (1414)
Q Consensus 790 pg~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~ 869 (1414)
.+|||||+++.. ..+++++|.... +||..|+++|+.|+|||+||||+|+. +.+++++ |... +.+++.+
T Consensus 31 ~gdDaav~~~~~---~~lv~s~D~~~~----~~~~iG~~av~~~~sDi~amGa~P~~-~~~~l~~--p~~~--~~~~l~~ 98 (298)
T cd06061 31 GGEDAAVVDFGG---KVLVVSTDPITG----AGKDAGWLAVHIAANDIATSGARPRW-LLVTLLL--PPGT--DEEELKA 98 (298)
T ss_pred ccceeEEEeeCC---cEEEEEcCceee----CCcceeeehhhhhHHHHHhcCCCCce-eEEEEEc--CCCC--CHHHHHH
Confidence 479999998754 468899985322 49999999999999999999999975 5566664 5432 3567888
Q ss_pred HHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCccccc
Q 000572 870 AATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLG 949 (1414)
Q Consensus 870 ~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~LG 949 (1414)
+++|+.++|+++|++++|||++.+.. +. -|++.+|++|.+++. ..+++..+++|| +|++ +| .+|
T Consensus 99 ~~~Gi~~~~~~~gi~ivGG~t~~~~~-------~~-~~~i~vt~~G~~~~~-~~~~~~~a~~Gd--~i~l-tg----~~G 162 (298)
T cd06061 99 IMREINEAAKELGVSIVGGHTEVTPG-------VT-RPIISVTAIGKGEKD-KLVTPSGAKPGD--DIVM-TK----GAG 162 (298)
T ss_pred HHHHHHHHHHHcCCeEEeeeeEEcCC-------CC-ccEEEEEEEEEEccc-ccccccCCCCCC--EEEE-eC----Cch
Confidence 99999999999999999999987632 11 258999999999764 457778889997 4455 22 344
Q ss_pred hHH--HHH-H-hhhcCCCCCCCCChHHHHHHHHHH---HH-H-HhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeC
Q 000572 950 GSA--LAQ-V-FDQVGNESPDLEDVPYLKRVFETV---QD-L-IGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLN 1020 (1414)
Q Consensus 950 GS~--la~-~-~~~~~~~~p~v~d~~~lk~~~~~v---~~-l-~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~ 1020 (1414)
.+. +.. . .+.+....+.. +.+..++++... .+ + +.+..++||||||||||+.+|+|||.++++|++|+++
T Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~DiSdGGL~~~l~~la~~s~~g~~i~~~ 241 (298)
T cd06061 163 IEGTAILANDFEEELKKRLSEE-ELREAAKLFYKISVVKEALIAAEAGVTAMHDATEGGILGALWEVAEASGVGLRIEKD 241 (298)
T ss_pred HHHHHHHHHhhHHHHhhhcCHH-HHHHHHHhhhhhhhHHHHHHhhhcCeeEEEeCCccHHHHHHHHHHHHcCCeEEEEec
Confidence 332 221 1 12221111111 122233433332 22 1 2222689999999999999999999999999999998
Q ss_pred CCCCchH----H------Hhcccccc-eEEEEecCCHHHHHHHHHHcCCCEEEEEEE
Q 000572 1021 SEGNSLF----Q------TLFAEELG-LVLEVSKSNLDTVSKKLHDAGVSAEIIGQV 1066 (1414)
Q Consensus 1021 ~~~~~~~----~------~LFsE~~G-~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v 1066 (1414)
++|..+. . .++.++.| ++++|++++.+++.+.+++.|+++++||+|
T Consensus 242 ~iP~~~~~~~~~~~~~~~~~~~~~~G~ll~~v~~~~~~~~~~~~~~~g~~~~~IG~v 298 (298)
T cd06061 242 KIPIRQETKEICEALGIDPLRLISSGTLLITVPPEKGDELVDALEEAGIPASVIGKI 298 (298)
T ss_pred ccCcCHHHHHHHHHcCCCHHHhhcCCcEEEEEChHHHHHHHHHHHHCCCCeEEEEeC
Confidence 7652110 0 11122335 689999999999999999999999999985
|
The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain. |
| >TIGR00476 selD selenium donor protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-24 Score=253.87 Aligned_cols=275 Identities=18% Similarity=0.177 Sum_probs=187.2
Q ss_pred HHHHHHHcCCCCCcchhhhhccccccCcccccccccCCCCCCcCcEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHH
Q 000572 749 DSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARL 828 (1414)
Q Consensus 749 ~~l~~vL~~p~VaSK~~l~~~~D~~V~g~tv~~p~vGp~~~pg~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~ 828 (1414)
+.|.++|..+ ++|+.+...+. +||. ++|||||++...+ ..+++|+|..++ ...+||..||+
T Consensus 24 ~~L~~~l~~~----------~~~~~~~~~~~----~g~~--~gDDaAvi~~~~~--~~lv~ttD~~~p-~~~~p~~~G~~ 84 (347)
T TIGR00476 24 DVLQKLLKGL----------QENHFVDDNQL----VGAV--MGDDAVIYLRHNG--LSLVQTTDYITP-IVDDPYMMGRI 84 (347)
T ss_pred HHHHHHHHhC----------CcccccCCcee----ecCC--CCCCeEEEEecCC--eEEEEEeccCCC-CccCHHHHHHH
Confidence 4555656543 34444444444 4543 4799999987643 579999998754 35699999999
Q ss_pred HHHHHhhchhccCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCc
Q 000572 829 AVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGS 908 (1414)
Q Consensus 829 AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~ppt 908 (1414)
||+.|+|||+|||++|+..+..+ .+ .|.+. +.+++.++++|+.++|+++|++++||||..+. -+.
T Consensus 85 av~~~lsDiaamGa~P~~~l~~~-~~-~~~~~--~~~~l~~i~~Gi~~~~~~~g~~lvGGdT~~~~-----------~~~ 149 (347)
T TIGR00476 85 AAANALSDIYAMGGTPIDAMLIL-LG-VSNKL--TIEVMREVIQGFKDACREAGTSLTGGHTILNP-----------WPV 149 (347)
T ss_pred HHHHHHHhhhhcCchHHHHHhhc-cC-CCCCC--CHHHHHHHHHHHHHHHHHcCCCeEeeeeecCC-----------cCE
Confidence 99999999999999997633221 22 23222 34677889999999999999999999986321 136
Q ss_pred EEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCccccchHHHH--H-HhhhcCC-CCCCCCChH-HHHHHH------
Q 000572 909 LVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALA--Q-VFDQVGN-ESPDLEDVP-YLKRVF------ 977 (1414)
Q Consensus 909 lvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~LGGS~la--~-~~~~~~~-~~p~v~d~~-~lk~~~------ 977 (1414)
+.+|++|.++. .+.+++..+++|| +|++ .+.+|.+.+. . ...+... ....- +.. .+....
T Consensus 150 i~~t~~G~~~~-~~~i~~~~ak~GD--~Iil-----tg~lG~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 220 (347)
T TIGR00476 150 FGGAVTGVCPE-EEVITPSGAQVGD--VLIL-----TKPLGTQVAVAVHKWLDIPKDLSITKE-EVELAINEAIENMARL 220 (347)
T ss_pred EEEEEEEEECc-cceecCCCCCCCC--EEEE-----ECCccHHHHHHHHHHhhcccccccCcH-HHHHHHHHHHHHHhHH
Confidence 77889998864 5678999999997 5566 3356655422 1 1111100 01110 000 011111
Q ss_pred -HHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCCCch----HH-----------Hhccccc------
Q 000572 978 -ETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSL----FQ-----------TLFAEEL------ 1035 (1414)
Q Consensus 978 -~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~~~~----~~-----------~LFsE~~------ 1035 (1414)
.....+..+..++||||||+|||+.+|.|||.+|++|++|++++++..+ +. .+|++..
T Consensus 221 ~~~~~~~~~~~~v~a~~DiT~gGL~~~L~~ia~~sg~g~~I~~~~iPi~~~~~~~~~~~~~~~~~~~~~~~~G~~l~~~~ 300 (347)
T TIGR00476 221 NRKAAGLMHTFNAHAATDITGFGILGHAQNMAKNSNVEARIVIENLPVLAKMEELSKLCGNPFGLMHGTCPEGGGLLSCL 300 (347)
T ss_pred HHHHHHHHhhCCceEEEeccCccHHHHHHHHHhcCCCeEEEEeCCCCCchhHHHHHHcCCCChHHHhhhhhccCCcccCC
Confidence 1112233445699999999999999999999999999999998764211 00 1233221
Q ss_pred ---------------ceEEEEecCCHHHHHHHHHHcCCCEEEEEEE
Q 000572 1036 ---------------GLVLEVSKSNLDTVSKKLHDAGVSAEIIGQV 1066 (1414)
Q Consensus 1036 ---------------G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v 1066 (1414)
+.++.|+++...++++.+++.|+++.+||+|
T Consensus 301 ~~~~~~~~~~~~~~g~~l~~v~~~~~~~~~~~~~~~~~~~~~ig~v 346 (347)
T TIGR00476 301 PREKAALLCDPIKSGGYLFGVQAEIIGIVEKTATERIIDKPRIGEV 346 (347)
T ss_pred CHHHHHHhcCchhccCcccccCHHHHHHHHHHHHhcCCCCCeEEEe
Confidence 3578899999999999999999999999997
|
In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelD, known as selenophosphate synthetase, selenium donor protein, and selenide,water dikinase. SelD provides reduced selenium for the selenium transferase SelA. This protein itself contains selenocysteine in many species; any sequence not aligning to the beginning of the model is likely have selenocysteine residue incorrectly interpreted as a stop codon upstream of the given sequence. The SelD protein also provides selenophosphate for the enzyme tRNA 2-selenouridine synthase, which catalyz |
| >COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-25 Score=250.98 Aligned_cols=278 Identities=22% Similarity=0.207 Sum_probs=197.6
Q ss_pred cCCCCCCcCcEEEEEecCCCceEeEEEEccCCCCCCCCHH-HHHHHHHHHHhhchhccCcccccccccccccccccCCCC
Q 000572 784 VGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPK-AMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDG 862 (1414)
Q Consensus 784 vGp~~~pg~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~-~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~ 862 (1414)
+||-. ++|++.+++.+. .+++|+|.+.....+-|. ..||+||+.++|||+.|||+|.. +.++++ .|++.+
T Consensus 33 v~~~~--g~D~~~i~l~~~---~la~tTD~~~i~P~ff~~~diG~lAV~gt~NDlav~GA~P~~-l~~~li--l~eg~~- 103 (339)
T COG0309 33 VGLAN--GEDAAIIDLGDG---VLAFTTDPFVIDPLFFPGGDIGKLAVHGTANDVAVSGAKPRY-LSVGLI--LPEGLP- 103 (339)
T ss_pred cCccc--ccceeeeecCCc---eEEEEeCCeEecccccCCCceEEEEEEEehhhhhhcCCCcee-eeEeEe--cCCCCC-
Confidence 34443 799999998752 799999964332222233 48999999999999999999954 556665 466554
Q ss_pred cHHHHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcC
Q 000572 863 EGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLA 942 (1414)
Q Consensus 863 e~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg 942 (1414)
.+.|.++++.|.+.|+++|++|++|||..+.. .+.|+.+..|++|.+.+ ...+++...+||| .|++ .
T Consensus 104 -~e~l~~i~~si~e~a~~~Gv~IvtGdTkV~~~-------~~~~~vi~tt~iG~~~~-~~~v~~~~~~~GD--~vI~--t 170 (339)
T COG0309 104 -IEDLERILKSIDEEAEEAGVSIVTGDTKVVPG-------GKDPIVINTTGIGIIDK-EILVSPSGARPGD--AVIV--T 170 (339)
T ss_pred -HHHHHHHHHHHHHHHHHcCCeEEccCceeecC-------CCCCcEEEeeeEEeecC-CcccccCCCCCCC--EEEE--c
Confidence 56788999999999999999999999988743 22355666799999875 4568999899998 3444 4
Q ss_pred CCccccchHHHHHHhhh-cCCCCCCCCCh-HHHHHHHH---HHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEE
Q 000572 943 KGKRRLGGSALAQVFDQ-VGNESPDLEDV-PYLKRVFE---TVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITL 1017 (1414)
Q Consensus 943 ~~~~~LGGS~la~~~~~-~~~~~p~v~d~-~~lk~~~~---~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~I 1017 (1414)
++.+..|.|.++..++. +...+- +|. ...+.++. ...+.... .|+||||.|+|||+.+|.|||.+|++|+.|
T Consensus 171 g~~g~hga~ila~~~~~~l~~~l~--sD~~~~~~~~~~~l~~~~~~~~~-~vtAMhDaTrGGla~aLnEmA~aSgvgi~I 247 (339)
T COG0309 171 GTIGIHGASILAHRFGEELETELG--SDCAPLAKLVKALLSVVGEALAA-AVTAMHDATRGGLAGALNEMAEASGVGISI 247 (339)
T ss_pred CChhHHHHHHHHHhcchhhccchh--hhHHHHHHHHHHHhhcchhhhhh-hhhhccCCchhHHHHHHHHHHHHcCCeEEE
Confidence 56778888888876642 111111 011 11122222 11111111 178899999999999999999999999999
Q ss_pred EeCCCCCch----HHHhccc------ccc-eEEEEecCCHHHHHHHHHHcC-CCEEEEEEEeCCCc-EEEE--ECCEEEE
Q 000572 1018 DLNSEGNSL----FQTLFAE------ELG-LVLEVSKSNLDTVSKKLHDAG-VSAEIIGQVNSSHS-VEIK--VDGLTHL 1082 (1414)
Q Consensus 1018 dl~~~~~~~----~~~LFsE------~~G-~vl~V~~~~~~~v~~~l~~~g-i~~~~IG~v~~~~~-l~i~--~~g~~i~ 1082 (1414)
+.++++.++ ++.+|+- +.| +|+.|+++++++++++|++++ +++.+||+|++++. +.+. .+++.++
T Consensus 248 ~ee~Ipv~~eVr~vce~lGiDPl~~anEG~lv~~V~~~~a~~~l~~L~~~~~~~A~iIGeV~~~~~~v~l~~~~G~~r~l 327 (339)
T COG0309 248 EEEKIPVREEVRGVCELLGLDPLELANEGKLVIAVPPEHAEEVLEALRSHGLKDAAIIGEVVEEKGGVGLETAGGGKRIL 327 (339)
T ss_pred eeccccccHHHHHHHHHhCCCHHHhhcCceEEEEECHHHHHHHHHHHHhcCCccceeEEEEeccCCcEEEEecCCceEec
Confidence 999875221 3344442 237 588999999999999999999 89999999998744 4443 2335555
Q ss_pred eccH
Q 000572 1083 NEKT 1086 (1414)
Q Consensus 1083 ~~~~ 1086 (1414)
+.+.
T Consensus 328 ~~P~ 331 (339)
T COG0309 328 EPPE 331 (339)
T ss_pred CCCC
Confidence 5444
|
|
| >PRK14105 selenophosphate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.4e-24 Score=250.33 Aligned_cols=248 Identities=17% Similarity=0.131 Sum_probs=170.5
Q ss_pred CcCcEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcc-cccccccccccccccCCCCcHHHHH
Q 000572 790 TLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVT-SLSHVKASGNWMYAAKLDGEGAAMY 868 (1414)
Q Consensus 790 pg~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~-Pl~~v~ls~n~~~p~~~~~e~~~l~ 868 (1414)
.+|||||++.+. ..+++|+|..++ ...+||..||+||+.|+|||+||||+ |.. +.+++ .+|++. +.+++.
T Consensus 46 ~gDDaAvi~~~~---~~lv~t~D~f~~-~~~~p~~~G~~av~~nlSDiaAmGa~~p~~-~~~~l--~lP~~~--~~~~l~ 116 (345)
T PRK14105 46 LGDDAAVIIKNG---LAIVKTVDVFTP-IVDDPYIQGKIAACNSTSDVYAMGLSEIIG-VLVIL--GIPPEL--PIEVAK 116 (345)
T ss_pred CCCceEEEeeCC---eEEEEEecCCCC-CcCCHHHHHHHHHHHHHHHHHHcCCccHHH-HHhhh--cCCCCC--CHHHHH
Confidence 479999997642 578999998654 35699999999999999999999997 544 44444 457543 356778
Q ss_pred HHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCcccc
Q 000572 869 DAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRL 948 (1414)
Q Consensus 869 ~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~L 948 (1414)
++++|+.++|+++|++++||||..+. -+.+.++++|..+ ..+.+++..+++|| +|++ ++.+
T Consensus 117 ~i~~Gi~~~~~~~gv~lvGGdT~~~~-----------~~~l~~svtg~g~-~~~~i~r~ga~~GD--~I~v-----Tg~l 177 (345)
T PRK14105 117 EMLQGFQDFCRENDTTIIGGHTILNP-----------WPLIGGAVTGVGK-EEDILTKAGAKEGD--VLIL-----TKPL 177 (345)
T ss_pred HHHHHHHHHHHHhCCEEEeeeeccCC-----------CCEEEEEEEEEEc-ccceeeCCCCCCCC--EEEE-----eCCC
Confidence 89999999999999999999986431 0234445555543 34678899999997 5677 3456
Q ss_pred chHH---HHHHhhhcCC--CCCCCCChHHHHHHH------------HHHHHHHh---ccCceEEEeCCCCchHHHHHHHH
Q 000572 949 GGSA---LAQVFDQVGN--ESPDLEDVPYLKRVF------------ETVQDLIG---DELVSTGHDISDGGLLVCTLEMS 1008 (1414)
Q Consensus 949 GGS~---la~~~~~~~~--~~p~v~d~~~lk~~~------------~~v~~l~~---~g~v~A~hDiSdGGL~~aL~EMa 1008 (1414)
|.+. +......... .++.- ..+...+.+ ..++.+.. ++.++||||||||||+.+|.|||
T Consensus 178 G~~~~~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~DiSdgGL~~~L~ela 256 (345)
T PRK14105 178 GTQSAMALSRVPEEFEDLIDITKE-EKEYIINKAIELMTTSNRYALLALREAEEEVGEKIANAMTDVTGFGILGHSQEMA 256 (345)
T ss_pred hHHHHHHHHhcchhhhhhccCCHH-HHHHHHHHHHHHHHhhhHHHHHHHHHhhhccccCCeeEEEcCCCchHHHHHHHHH
Confidence 6542 2221111110 01100 111111110 11222211 24589999999999999999999
Q ss_pred hcCCeEEEEEeCCCCCch----HHHhcc------ccc----ceEEEEecCCHHHHHHHHHHcCCCEEEEEEEeC
Q 000572 1009 FAGNYGITLDLNSEGNSL----FQTLFA------EEL----GLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNS 1068 (1414)
Q Consensus 1009 ~as~~G~~Idl~~~~~~~----~~~LFs------E~~----G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~ 1068 (1414)
.++++|++|+ ++|..+ +..+|+ |++ |+|++|++++.+++.+.+++.|+++++||+|++
T Consensus 257 ~aS~v~i~i~--~iPi~~~~~~~~~~~~~~l~~g~~~~ssGgLl~tv~~e~~~~~~~~l~~~g~~~~~IG~V~~ 328 (345)
T PRK14105 257 EQSNVEIEIS--TLPVIKGTPELSSLFGHALLDGYGAETAGGLLISVKPEYKDKLIDKLEKNNVYAFEVGKVVK 328 (345)
T ss_pred hhCCCeEEEE--ccCCchhHHHHHHHhcccccCCCCCcccCeEEEEecHHHHHHHHHHHHhCCCCceEEEEEEe
Confidence 9999999986 554221 122332 233 479999999999999999999999999999976
|
|
| >PHA03366 FGAM-synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.4e-24 Score=280.24 Aligned_cols=278 Identities=13% Similarity=0.092 Sum_probs=220.4
Q ss_pred CceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeE-EEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCCh
Q 000572 391 QDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVV-ASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASP 469 (1414)
Q Consensus 391 ~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~-a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~ 469 (1414)
....+++++......+.+||+.||..+|++++|++++. |++|+ +++++++|++|..|+ .
T Consensus 687 ~~~G~A~siGe~p~~~~lDP~~Ga~~AVaEAl~NL~aa--~~~~L~~i~lslNf~wP~~p~------------------~ 746 (1304)
T PHA03366 687 AVPGTCSALGEQGYKVQLDPILGAKYAIVEALTNLMLA--PVANLEDITITLSVTWPPTDQ------------------A 746 (1304)
T ss_pred CCCEEEEecCCCceEEEcCHHHHHHHHHHHHHHHHhhc--CCccchheEEEEEecCCCCcc------------------h
Confidence 34578888887777889999999999999999999999 99999 999999998876543 3
Q ss_pred HHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCCceEEEEEEEeeeCc-ccccCC-CCCCCEEEEEccCC
Q 000572 470 LQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHN-HISKGE-PDIGMLVVKIGGPA 547 (1414)
Q Consensus 470 ~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~Plv~~~~vG~v~~~-~i~r~~-a~~GD~Ivv~G~~~ 547 (1414)
.+.|.++++|++++|.++|+|+++|++ +++|++..+....+..|.+.+++++.+++. ++.+.. .++||.|+++|..
T Consensus 747 ~a~L~eav~ai~e~C~~LgIpIv~G~~-S~yne~~~~~~~i~~pptIvisg~~~~~dv~k~vTp~lk~~G~~L~lIg~~- 824 (1304)
T PHA03366 747 ASELYRALAACKEFCRELGVNFTFTSA-SSSPRQDQPPQPGPLFNTIVFTASAPVPSSTPRLTPDLKKPGSALVHLSIS- 824 (1304)
T ss_pred HHHHHHHHHHHHHHHHHcCCCEeeeec-ccccccCCCCccccCCCeEEEEEEEEccCcccccCcccCCCCCEEEEEeCC-
Confidence 668899999999999999999999999 566653111111234455556666666654 444444 4679999999863
Q ss_pred CcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeE
Q 000572 548 YRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGA 625 (1414)
Q Consensus 548 g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga 625 (1414)
...++||+.++... +. ....++..+++.++++ ++...++.++++|.|+||+|.|||+.+|.|||. ++|+
T Consensus 825 ~~~~LgGS~laq~~-~~-----~g~~~P~vd~~~lk~~---f~~v~~Li~~glI~A~HDVSdGGL~~ALaEMAfag~~G~ 895 (1304)
T PHA03366 825 PEYTLAGSVFEQIF-GL-----KSGTLPDISPSYLKNL---FRAVQHLISEGLVVSGHDVSDGGLIACLAEMALAGGRGV 895 (1304)
T ss_pred CCCCcchhHHHHhh-cc-----ccCCCCCCCHHHHHHH---HHHHHHHHHcCCeEEEEECCcCHHHHHHHHHHHhCCCcE
Confidence 34789998876543 32 1234455577777776 445556678899999999999999999999999 7999
Q ss_pred EEEeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCCe---EEEEeCcccccccCC
Q 000572 626 EIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGR---VVLVDSAAVQKCQSS 702 (1414)
Q Consensus 626 ~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~---l~l~~~~~~~~~~~~ 702 (1414)
+|++.. ..++++.|++|+++ +++.|++++.+++++++++.|+++.+||++++++. +.+..
T Consensus 896 ~Idl~~------~~d~~~~LFsE~~G-~VveV~~~~~~~v~~~l~~~gi~~~vIG~vt~~~~~~~l~I~~---------- 958 (1304)
T PHA03366 896 TITVPA------GEDPLQFLFSETPG-VVIEVPPSHLSAVLTRLRSRNIICYPIGTVGPSGPSNTFSVSH---------- 958 (1304)
T ss_pred EEEeCC------CCCHHHHHhCCCCe-EEEEEchhHHHHHHHHHHHCCCCeEEEEEEcCCCceEEEEEEE----------
Confidence 999842 24588899999999 99999999999999999999999999999998766 88865
Q ss_pred CCCCCCCeEEcchhhhh
Q 000572 703 GLPPPPPAVDLELERVL 719 (1414)
Q Consensus 703 ~~~~~~~~~dl~~~~l~ 719 (1414)
+++.+++.+++.|.
T Consensus 959 ---~~~~l~~~~l~eL~ 972 (1304)
T PHA03366 959 ---NGTVLFRESLSSLR 972 (1304)
T ss_pred ---CCEEEEecCHHHHH
Confidence 35677899999875
|
|
| >TIGR01739 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM-synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.2e-23 Score=272.58 Aligned_cols=269 Identities=15% Similarity=0.107 Sum_probs=212.6
Q ss_pred eEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCc---eeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCCh
Q 000572 393 LDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGS---FVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASP 469 (1414)
Q Consensus 393 ~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA---~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~ 469 (1414)
..+++.+......+.+|||.||..+|+++++++++. |+ +|+++++++++ |.. + ..
T Consensus 593 ~G~a~a~Ge~p~~~~~DP~~ga~~AV~Ea~~Nlaaa--~~~~l~pi~lt~n~~~-----P~~-----------~----~~ 650 (1202)
T TIGR01739 593 SCVCSALGEQTYKVQADPKRGATYAITEALLNLSLS--PWNTLEDVIITLSVTW-----SPT-----------D----HV 650 (1202)
T ss_pred eEEEEecCCCceEEEcCHHHHHHHHHHHHHHHHHhC--CccccCCcEEEEEecC-----CCC-----------C----ch
Confidence 578888888888889999999999999999999999 87 99999997764 221 0 13
Q ss_pred HHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCC--ceEEEEEEEeeeC-cccccCC-CCCCCEEEEEcc
Q 000572 470 LQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLK--PIMFSGGIGQIDH-NHISKGE-PDIGMLVVKIGG 545 (1414)
Q Consensus 470 ~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~--Plv~~~~vG~v~~-~~i~r~~-a~~GD~Ivv~G~ 545 (1414)
.+.|.++++|+.++|.++|+|+++|++. + ++. +. .... |.+.+++++.++. .+..+.. .++||.|+++|.
T Consensus 651 ~~~L~~av~ai~e~C~~Lgipiv~G~~S-~-s~~--~~--~v~~Ptptivisa~a~v~dv~k~vTp~lk~~G~~L~LIg~ 724 (1202)
T TIGR01739 651 YSLLKDALRACKDFCEELGVSFTVTSAA-S-SPT--QD--SGSAPFMSIVFSASCPVLLSAKKITPDLKSHGSHLIWLSL 724 (1202)
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEeeecc-c-cCC--CC--CccCCCCeEEEEEEEEecCHHhCcCcccCCCCCEEEEEcC
Confidence 6789999999999999999999999984 4 221 11 1333 4566677776654 3444443 478999999986
Q ss_pred CCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CC
Q 000572 546 PAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PK 623 (1414)
Q Consensus 546 ~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~ 623 (1414)
+++.++||+.++... +. ....++..++...+++.+ ...++.++++|.|+||+|.|||+.+|.|||. ++
T Consensus 725 -t~~~~LgGS~laq~~-~~-----~~~~~P~vd~~~lk~~~~---~v~~li~~glI~S~HDvSdGGL~~aLaEMA~ag~~ 794 (1202)
T TIGR01739 725 -HPSYTLAGSIFEQIL-GL-----SFIRLPALSPVSLKKLLS---ALQTLVKEGVIVSGHDVSDGGLVACVAEMALSGGK 794 (1202)
T ss_pred -CCCCCchHhHHHHhh-cc-----ccCCCCCCCHHHHHHHHH---HHHHHHhcCCEEEEEECCcCHHHHHHHHHHHhCCC
Confidence 446899998766443 32 123445557887777644 4455668889999999999999999999999 79
Q ss_pred eEEEEeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEc---CCeEEEEeCccccccc
Q 000572 624 GAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISG---EGRVVLVDSAAVQKCQ 700 (1414)
Q Consensus 624 Ga~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~---~~~l~l~~~~~~~~~~ 700 (1414)
|++|+++. .++|+++++||++. +++.|++++.++++++++++|+++++||+|++ ++.+++..
T Consensus 795 G~~Idl~~------~~~p~~~LFSEs~G-~VieV~~~~~~~v~~~l~~~gi~~~vIG~vt~~~~~~~l~I~~-------- 859 (1202)
T TIGR01739 795 GVRITLPH------GTDPLEFLCSETPG-VVIEVDPSSMYAVLQFLRSEGLVFQVIGRVGESGPSPTFSVVH-------- 859 (1202)
T ss_pred cEEEEeCC------CCCHHHHHhCCCCc-EEEEEchhHHHHHHHHHHHCCCCeEEEEEECCCCCCcEEEEEE--------
Confidence 99999863 35788999999998 99999999999999999999999999999996 46788765
Q ss_pred CCCCCCCCCeEEcchhhhh
Q 000572 701 SSGLPPPPPAVDLELERVL 719 (1414)
Q Consensus 701 ~~~~~~~~~~~dl~~~~l~ 719 (1414)
+++.+++++++.|.
T Consensus 860 -----~~~~l~~~~l~~L~ 873 (1202)
T TIGR01739 860 -----NSTVLFQEPLSLLQ 873 (1202)
T ss_pred -----CCEEEEEecHHHHH
Confidence 36678899999885
|
This model describes a family of large proteins of herpesvirues. The protein is described variably as tegument protein or phosphoribosylformylglycinamidine synthase (FGAM-synthase). Most of the length of the protein shows homology to eukaryotic FGAM-synthase. Functional characterizations were not verified during construction of this model. |
| >PLN03206 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=256.87 Aligned_cols=290 Identities=15% Similarity=0.088 Sum_probs=221.2
Q ss_pred CCCCccccccCC--ceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCC
Q 000572 380 PGSRCQLSESSQ--DLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWED 457 (1414)
Q Consensus 380 ~g~~~~~~~~~~--~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~ 457 (1414)
|+.|++|+.... ...+++++......+.+|||.||+-+|++++|+++|. .|..+.+.++++|..-+.
T Consensus 683 p~aD~aV~~~~~~~~~g~a~s~G~~p~~~~~dp~~ga~~AV~Ea~~Nlvaa----~~~~l~di~~s~nw~~~~------- 751 (1307)
T PLN03206 683 PLADVAVIAQTHTGLTGGACAIGEQPIKGLVDPKAMARLAVGEALTNLVWA----KVTALSDVKASGNWMYAA------- 751 (1307)
T ss_pred CCcceeEEEEeCCCCeEEEEEecCCCceeeeCHHHHHHHHHHHHHhHhhcc----CCCcHHHeEEEcChhHhh-------
Confidence 567888776532 4678899988888899999999999999999999995 467788888888721110
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCCc-eEEEEEEEeeeCc-ccccCCC-
Q 000572 458 PSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKP-IMFSGGIGQIDHN-HISKGEP- 534 (1414)
Q Consensus 458 ~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~P-lv~~~~vG~v~~~-~i~r~~a- 534 (1414)
..|++ .+.+.++++|+.++|.++|+|++||.. |+++++.-|. .....| .++++++|.+++. ++.+...
T Consensus 752 ---~~p~~----~~~l~~av~g~~~~~~~Lgipii~GKd-Sls~~~~~~~-~~~~~P~TLvIs~~~~v~Dv~~~vtp~lK 822 (1307)
T PLN03206 752 ---KLDGE----GADMYDAAVALRDAMIELGVAIDGGKD-SLSMAAQAGG-EVVKAPGNLVISAYVTCPDITKTVTPDLK 822 (1307)
T ss_pred ---cCCCC----HHHHHHHHHHHHHHHHHcCCCcccCee-cCCCCCCCCC-CCcCCCCCEEEEEEEEcCCcccCcChhhc
Confidence 12221 235689999999999999999999999 6777653221 123334 4567888888764 3444443
Q ss_pred CCCCEEEE---EccCCCcccccHHHHHHhhhCCCCCccccccccC-CCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCC
Q 000572 535 DIGMLVVK---IGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQR-GDAEMAQKLYRVVRACIEMGETNPIISIHDQGAG 610 (1414)
Q Consensus 535 ~~GD~Ivv---~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~-~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaG 610 (1414)
.+||.|++ +|.. +.-+||++++... +.. ...++. .|+...|++ ++++.++.++++|.|+||+|.|
T Consensus 823 ~~G~~vlL~idlG~~--~~~LGGS~~~q~~-~~~-----g~~~Pdv~d~~~lK~~---f~av~~Li~~glV~A~HDvSdG 891 (1307)
T PLN03206 823 LGDDGVLLHVDLGKG--KRRLGGSALAQAY-DQI-----GDDCPDLDDVAYLKKA---FEATQDLIAKRLISAGHDISDG 891 (1307)
T ss_pred CCCCEEEEEEecCCC--CcCccccHHHHHh-Ccc-----CCCCCCCCCHHHHHHH---HHHHHHHHHCCCeeEEEeCCcC
Confidence 57998888 7853 5668999876443 311 122222 367776665 5566677789999999999999
Q ss_pred cHHHHHHHHhc--CCeEEEEeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCCeE
Q 000572 611 GNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRV 688 (1414)
Q Consensus 611 GL~~aL~Ela~--~~Ga~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l 688 (1414)
||+.+|.|||. ++|++|+++..+ +++.+.+++|++. +++.|++++.++|+++++++++++++||++++++.+
T Consensus 892 GL~~ALaEMAfag~~G~~Idl~~~~-----~~~~~~LFsEs~G-~VieV~~e~~~~v~~~l~~~gi~~~vIG~vt~~~~i 965 (1307)
T PLN03206 892 GLVVTLLEMAFAGNCGINVDLPSSG-----HSAFETLFAEELG-LVLEVSRKNLDAVMEKLAAAGVTAEVIGQVTASPLI 965 (1307)
T ss_pred HHHHHHHHHHhhcCCcEEEEeCCcc-----chHHHHHhCCCcc-EEEEEehhHHHHHHHHHHHCCCCeEEEEEECCCCeE
Confidence 99999999999 799999987632 3467889999997 999999999999999999999999999999988888
Q ss_pred EEEeCcccccccCCCCCCCCCeEEcchhhhh
Q 000572 689 VLVDSAAVQKCQSSGLPPPPPAVDLELERVL 719 (1414)
Q Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~dl~~~~l~ 719 (1414)
++.. +++.+++++++.|.
T Consensus 966 ~I~~-------------~g~~~l~~~l~eL~ 983 (1307)
T PLN03206 966 EVKV-------------DGATCLSEKTASLR 983 (1307)
T ss_pred EEEE-------------CCEEEEecCHHHHH
Confidence 8865 46678899998885
|
|
| >PLN02557 phosphoribosylformylglycinamidine cyclo-ligase | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.7e-20 Score=214.90 Aligned_cols=260 Identities=13% Similarity=0.086 Sum_probs=180.7
Q ss_pred CcCcEEEEEecCCCceEeEEEEccCCC---CCC-CCHHH-HHHHHHHHHhhchhccCcccccccccccccccccCCCCcH
Q 000572 790 TLADVAVIAQTYTDLTGGACAIGEQPI---KGL-LNPKA-MARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEG 864 (1414)
Q Consensus 790 pg~DaAVi~~~~~~~~gla~s~g~~p~---~~~-~dP~~-ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~ 864 (1414)
.|+|||+++.+. ..+++++|.... +.. .+|+. .||++|+.++|||++|||+|+..+ .+ + .|.+. +.
T Consensus 85 iGdDaavi~~~~---~~LV~ttD~vgtk~~~a~~~~~~~~iG~~aVa~nvnDIaamGA~P~~~l-~~--l-~~~~l--~~ 155 (379)
T PLN02557 85 IGGFGGLFPFGD---SYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFL-DY--F-ATSHL--DV 155 (379)
T ss_pred CCCCeEEEecCC---CEEEEEeCCCCCCchhhhhcCcHhhHHHHHHHhHHHHHHHcCCChHHhh-ee--c-ccCCC--CH
Confidence 589999998763 468999996522 222 67885 899999999999999999997633 22 2 24433 34
Q ss_pred HHHHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCC
Q 000572 865 AAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKG 944 (1414)
Q Consensus 865 ~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~ 944 (1414)
+++.++++|+.++|+++|++++||+|...... .. ...+.+.+|++|.++. .+.+++..+++|| .|+.+ +.
T Consensus 156 ~~l~~i~~Gi~~a~~~~Gv~lVGGdT~~~p~~-~~----~~~~~i~~t~iG~v~~-~~~i~~~~akpGD-~Iigl--~s- 225 (379)
T PLN02557 156 DLAEKVIKGIVDGCQQSDCALLGGETAEMPGF-YA----EGEYDLSGFAVGSVKK-DAVIDGKNIVAGD-VLIGL--PS- 225 (379)
T ss_pred HHHHHHHHHHHHHHHHhCCEEEeecceEccCc-cc----CCceeEEEEEEEEEec-ccccccccCCCCC-EEEEe--cc-
Confidence 67788999999999999999999999743211 00 0123577899999875 4678888889998 44433 32
Q ss_pred ccccch--HHHHHHhhhc----CCCCCCCC-C-hH-HH---HHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCC
Q 000572 945 KRRLGG--SALAQVFDQV----GNESPDLE-D-VP-YL---KRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGN 1012 (1414)
Q Consensus 945 ~~~LGG--S~la~~~~~~----~~~~p~v~-d-~~-~l---k~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~ 1012 (1414)
.+.++. |..-..+.+. ....|... . .+ .+ +.+.+.+.++.+++.|++|||+|.|||+..|.||+. ++
T Consensus 226 sGiHsng~sl~r~~l~~~~~~~~~~~~~~~~~l~e~ll~pt~iyv~~vl~l~~~~~V~am~diTgGGl~~~L~e~~~-~g 304 (379)
T PLN02557 226 SGVHSNGFSLVRRVLAKSGLSLKDQLPGASVTIGEALMAPTVIYVKQVLDIISKGGVKGIAHITGGGFTDNIPRVFP-KG 304 (379)
T ss_pred cccccchhhhhHHHHHhccccccccccccCccHHHHhhcchHHHHHHHHHHhhcCCeEEEEcCCcchHhhhhHHHhc-CC
Confidence 333432 3222233211 12222110 0 11 12 445567777777788999999999999999999996 79
Q ss_pred eEEEEEeCCCC-------------Cch--HHHhcccccceEEEEecCCHHHHHHHHHHcCCCEEEEEEEeCCCcE
Q 000572 1013 YGITLDLNSEG-------------NSL--FQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSV 1072 (1414)
Q Consensus 1013 ~G~~Idl~~~~-------------~~~--~~~LFsE~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l 1072 (1414)
+|++|+.+.++ .++ +...|++.-|+|+.|++++++++++. .+.++++||+|+++..+
T Consensus 305 ~g~~Id~~~~pv~~~f~~i~~~g~i~~~em~~tfN~GiGmv~~V~~~~a~~~l~~---~~~~a~~IG~V~~~~~v 376 (379)
T PLN02557 305 LGAKIRTGSWEVPPLFKWLQEAGNIEDAEMRRTFNMGIGMVLVVSPEAADRILEE---GAYPAYRIGEVINGEGV 376 (379)
T ss_pred eeEEEeCCCCCCCHHHHHHHHhCCCCHHHHHHhcCCcccEEEEECHHHHHHHHHh---cCCCeEEEEEEEcCCce
Confidence 99999988753 233 22357876678999999988877665 35889999999876543
|
|
| >TIGR01857 FGAM-synthase phosphoribosylformylglycinamidine synthase, clade II | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.4e-20 Score=241.19 Aligned_cols=270 Identities=15% Similarity=0.147 Sum_probs=208.4
Q ss_pred ceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccC-----CCCc--HHH-HHHHHHHHH
Q 000572 804 LTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAK-----LDGE--GAA-MYDAATALA 875 (1414)
Q Consensus 804 ~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~-----~~~e--~~~-l~~~~~gl~ 875 (1414)
...+++.+..|.+.+.++||.||...|...+||+.+||+..+..+.++. ++.|.. .++. ..+ +.+++.|+.
T Consensus 311 ~~~v~fK~ETHNHPSaIePf~GAATGvGG~IRD~lsg~a~~~~~Lr~~g-~g~p~~~~~~~~~gklp~r~I~~gv~~G~s 389 (1239)
T TIGR01857 311 PWLLMFKNETHNHPTEIEPFGGAATCIGGAIRDPLSGRSYVYQAMRVTG-AGDPTVPISETLKGKLPQRKITTTAAHGYS 389 (1239)
T ss_pred ceEEEEEEccCCCCCccCCCCcccccCCchhccccccceeeecccccCC-CCCCCccccccccCCCchhhhhhhccccee
Confidence 3678899999999999999999999999999999998876333222210 132311 0111 122 345899999
Q ss_pred HHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCC--CccccchHHH
Q 000572 876 EAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAK--GKRRLGGSAL 953 (1414)
Q Consensus 876 eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~--~~~~LGGS~l 953 (1414)
++-.++|+|.++|.+-+...| ..+|.+...++|.++. .++.... ..+|| .+|++ |. ++..+||+.+
T Consensus 390 ~YGN~~GvpTg~g~~~f~~~Y-------~~~~lv~~~~vG~~~~-~~v~k~~-~~~Gd-~iv~~--Gg~tGRdGigGat~ 457 (1239)
T TIGR01857 390 SYGNQIGLATGQVSEIYHPGY-------VAKRMEVGAVVAATPK-ENVVREK-PEPGD-VIILL--GGKTGRDGIGGATG 457 (1239)
T ss_pred ccCcccCCceeeEEEEEecCC-------CCCceEEEEEEEeecH-HHhccCC-CCCCC-EEEEE--CCCCCcCcccchhh
Confidence 999999999999987544322 2345566667798874 3444333 56897 55565 54 4788899987
Q ss_pred HH-Hhhhc--CCCCC--CCCChHHHHHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCC-----
Q 000572 954 AQ-VFDQV--GNESP--DLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEG----- 1023 (1414)
Q Consensus 954 a~-~~~~~--~~~~p--~v~d~~~lk~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~----- 1023 (1414)
+. .++.- +...+ +..|++.+|++++++.+++.+++|.|+||+|+|||+++|+|||+ |++|+++.++
T Consensus 458 SS~~~~~~s~~~~~~aVQ~Gdp~~Ekkl~e~i~~a~~~glI~s~hD~gaGGLavAlaEma~----G~~IdL~~vp~~~~g 533 (1239)
T TIGR01857 458 SSKEHTVESLELCGAEVQKGNAPEERKIQRLFRNGNVTRLIKKCNDFGAGGVSVAIGELAD----GLEIDLNKVPKKYEG 533 (1239)
T ss_pred hhhhccccccccccCccCcCCHHHHHHHHHHHHHHHhCCCEEEEeecchhHHHHHHHHHhC----CEEEEcCCCccccCC
Confidence 64 33221 11112 23488999999999999999999999999999999999999997 9999998753
Q ss_pred CchHHHhcccccce-EEEEecCCHHHHHHHHHHcCCCEEEEEEEeCCCcEEEEECCEEEEeccHHHHH
Q 000572 1024 NSLFQTLFAEELGL-VLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVDGLTHLNEKTSLLR 1090 (1414)
Q Consensus 1024 ~~~~~~LFsE~~G~-vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i~~~g~~i~~~~~~~L~ 1090 (1414)
.++.+.||||++++ +++|+|++.++|++++++.++++++||+|++++.+++.++|+.+++++++-|.
T Consensus 534 l~p~EiLfSESQeRmlv~V~pe~~e~f~~i~~~~~l~~~vIG~vt~~~~l~v~~~g~~v~dL~~~fL~ 601 (1239)
T TIGR01857 534 LNGTELAISESQERMAVVVSPEDVDAFLAYCNEENLEATVVATVTEKPRLVMNWNGKTIVDLSRRFLD 601 (1239)
T ss_pred CCHHHHhhCCcCCeEEEEEChhhHHHHHHHHHHCCCCEEEEEEECCCCeEEEEeCCceEEEeeHHHHc
Confidence 46778999999997 88999999999999999999999999999988889999999999999999886
|
This model represents a single-molecule form of phosphoribosylformylglycinamidine synthase, also called FGAM synthase, an enzyme of purine de novo biosynthesis. This model represents a second clade of these enzymes found in Clostridia, Bifidobacteria and Streptococcus species. This enzyme performs the fourth step in IMP biosynthesis (the precursor of all purines) from PRPP. |
| >PRK13526 glutamine amidotransferase subunit PdxT; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-20 Score=196.99 Aligned_cols=169 Identities=17% Similarity=0.221 Sum_probs=128.0
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~ 1224 (1414)
+||+||..||.+++ ..+||+++|+++..++ .+.+++++|+||||||.++ +.+ +.+.+.++.+.
T Consensus 3 ~~igVLalqG~~~E--h~~al~~lG~~v~~v~------~~~~l~~~D~LILPGG~~t-~~~--------~ll~~~~l~~~ 65 (179)
T PRK13526 3 QKVGVLAIQGGYQK--HADMFKSLGVEVKLVK------FNNDFDSIDRLVIPGGEST-TLL--------NLLNKHQIFDK 65 (179)
T ss_pred cEEEEEECCccHHH--HHHHHHHcCCcEEEEC------CHHHHhCCCEEEECCChHH-HHH--------HHhhhcCcHHH
Confidence 78999999999977 5799999999988886 5567899999999998553 322 25666789999
Q ss_pred HHHHHhCCCCeEEEEehhhHHHHh----cCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeE-EEEEccCCCccccC
Q 000572 1225 FQEFYKRPDTFSLGVCNGCQLMAL----LGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFS-SVTIEDSPAIMLKG 1299 (1414)
Q Consensus 1225 i~~f~~~~~~piLGIC~G~QlL~~----lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v-~v~i~~~~s~~l~g 1299 (1414)
|++|.+ ++|++|||+|||+|++ +|+++ + ++.+|+++||+|+|+ .+.++
T Consensus 66 Ik~~~~--~kpilGICaG~qlL~~~s~~Lg~id---g-------------~V~Rn~~Grq~~sf~~~~~~~--------- 118 (179)
T PRK13526 66 LYNFCS--SKPVFGTCAGSIILSKGEGYLNLLD---L-------------EVQRNAYGRQVDSFVADISFN--------- 118 (179)
T ss_pred HHHHHc--CCcEEEEcHHHHHHHccCCCCCCcc---E-------------EEEEcCCCCccceeeeecCcC---------
Confidence 999983 7899999999999999 35554 3 488999999999997 33331
Q ss_pred CCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccc
Q 000572 1300 MEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERC 1379 (1414)
Q Consensus 1300 ~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~ 1379 (1414)
+..++. .+++.| ...+..++-+|..+|. | .|.++ ++||++|+-||||.+
T Consensus 119 --~~~~~~--------vFiRAP-~i~~~~~~v~vla~~~---------------~---~~v~v--~q~~~l~~~FHPElt 167 (179)
T PRK13526 119 --DKNITG--------VFIRAP-KFIVVGNQVDILSKYQ---------------N---SPVLL--RQANILVSSFHPELT 167 (179)
T ss_pred --CceEEE--------EEEcCc-eEeEcCCCcEEEEEEC---------------C---EEEEE--EECCEEEEEeCCccC
Confidence 222332 344444 3345556667777761 2 35666 479999999999999
Q ss_pred cccccCCCC
Q 000572 1380 FLMWQYPWY 1388 (1414)
Q Consensus 1380 ~~~~q~~~~ 1388 (1414)
.+...|.|+
T Consensus 168 ~d~r~h~~f 176 (179)
T PRK13526 168 QDPTVHEYF 176 (179)
T ss_pred CCchHHHHH
Confidence 988777765
|
|
| >PRK13142 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.5e-19 Score=193.20 Aligned_cols=176 Identities=20% Similarity=0.237 Sum_probs=124.3
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|+|+ .+|..|.+++.+||+++|+++..+. .+.++.++|+||+||++++.+.+. .++..++.+.|+
T Consensus 2 i~ii-dyg~gN~~s~~~al~~~g~~~~~v~------~~~~l~~~D~lIlPG~g~~~~~~~--------~L~~~gl~~~i~ 66 (192)
T PRK13142 2 IVIV-DYGLGNISNVKRAIEHLGYEVVVSN------TSKIIDQAETIILPGVGHFKDAMS--------EIKRLNLNAILA 66 (192)
T ss_pred EEEE-EcCCccHHHHHHHHHHcCCCEEEEe------CHHHhccCCEEEECCCCCHHHHHH--------HHHHCCcHHHHH
Confidence 7777 6788889999999999999999886 455788899999999999888765 455567888888
Q ss_pred HHHhCCCCeEEEEehhhHHHHh---------cCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccc
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMAL---------LGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIML 1297 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~---------lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l 1297 (1414)
+ . .++|+||||+|||||++ ||++| +.+.+ ++...+.|++.||. ++. +++++
T Consensus 67 ~--~-~g~PvlGIClGmQlL~~~~~eg~~~GLgll~---~~V~r-f~~~~~vph~GWn~----------~~~---~~~l~ 126 (192)
T PRK13142 67 K--N-TDKKMIGICLGMQLMYEHSDEGDASGLGFIP---GNISR-IQTEYPVPHLGWNN----------LVS---KHPML 126 (192)
T ss_pred H--h-CCCeEEEECHHHHHHhhhcccCCcCccCcee---EEEEE-CCCCCCCCcccccc----------cCC---CCccc
Confidence 7 2 68999999999999997 35555 43322 33445678899883 221 23444
Q ss_pred cCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCc
Q 000572 1298 KGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPE 1377 (1414)
Q Consensus 1298 ~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPE 1377 (1414)
+ +++| +.|+ |++. .. ..+. .++ +| |.+ -++++ .+||++|+|||||
T Consensus 127 ~----~~~y--FVhS---y~v~-~~--------~~v~-~~~--------~y-----g~~-~~~~v--~~~n~~g~QFHPE 171 (192)
T PRK13142 127 N----QDVY--FVHS---YQAP-MS--------ENVI-AYA--------QY-----GAD-IPAIV--QFNNYIGIQFHPE 171 (192)
T ss_pred c----cEEE--EECC---CeEC-CC--------CCEE-EEE--------EC-----CCe-EEEEE--EcCCEEEEecCcc
Confidence 3 4454 8999 4552 10 1121 122 24 321 24444 4799999999999
Q ss_pred cccccccCCCCCCCCCCCCCCCChhHHHHHHHHH
Q 000572 1378 RCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1378 r~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~ 1411 (1414)
+|.. .++++++|+..
T Consensus 172 kS~~-------------------~G~~ll~nf~~ 186 (192)
T PRK13142 172 KSGT-------------------YGLQILRQAIQ 186 (192)
T ss_pred cCcH-------------------hHHHHHHHHHh
Confidence 9876 58999998753
|
|
| >PRK14004 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.1e-19 Score=194.74 Aligned_cols=190 Identities=16% Similarity=0.179 Sum_probs=135.3
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|+|| +||..|..++.+|++++|.++..+. .+.++.++|+||+||+.+|.+.+. .++..++.+.|+
T Consensus 2 i~ii-dyg~gNl~s~~~al~~~~~~~~~~~------~~~~l~~~d~iIlPG~g~~~~~~~--------~l~~~gl~~~i~ 66 (210)
T PRK14004 2 IAIL-DYGMGNIHSCLKAVSLYTKDFVFTS------DPETIENSKALILPGDGHFDKAME--------NLNSTGLRSTID 66 (210)
T ss_pred EEEE-ECCCchHHHHHHHHHHcCCeEEEEC------CHHHhccCCEEEECCCCchHHHHH--------HHHHcCcHHHHH
Confidence 7777 6899999999999999999988775 455678999999999999987775 345567999999
Q ss_pred HHHhCCCCeEEEEehhhHHHHhc----------------CccCCCCCCCccCCC-CCCCCCeeeecCCCceEEeeEEEEE
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALL----------------GWIPGPQVGGVHGAG-GDPSQPRFVHNESGRFECRFSSVTI 1289 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~l----------------gllp~~~g~~~~~~~-~~~~~p~l~~N~s~~fe~r~v~v~i 1289 (1414)
++++ .++|+||||+|||+|++. |++| +.+.+ ++ .....|++.|| .+++
T Consensus 67 ~~~~-~~~pilGiC~G~Q~l~~~~~e~~~~~~~~~~~Glg~~~---~~v~~-~~~~~~~~ph~Gw~----------~v~~ 131 (210)
T PRK14004 67 KHVE-SGKPLFGICIGFQILFESSEETNQGTKKEQIEGLGYIK---GKIKK-FEGKDFKVPHIGWN----------RLQI 131 (210)
T ss_pred HHHH-cCCCEEEECHhHHHHHHhcccccCCCcCcccCCcceeE---EEEEE-cCCCCCcCCccCcc----------ccee
Confidence 9995 899999999999999984 3444 22111 11 12356788888 4444
Q ss_pred c-cCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCC-CCcCceeEEEcCCC
Q 000572 1290 E-DSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVN-GSPLGVAAICSPDG 1367 (1414)
Q Consensus 1290 ~-~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPn-Gs~~~iagi~s~dG 1367 (1414)
. ..++++|+++.. .+++++.||+ .. .... .......++ + | ..+.++. .++
T Consensus 132 ~~~~~~~lf~~l~~-~~~v~~~HS~---~~-~~~~-------~l~~sa~~~-------------~~g--~~~~a~~-~~~ 183 (210)
T PRK14004 132 RRKDKSKLLKGIGD-QSFFYFIHSY---RP-TGAE-------GNAITGLCD-------------YYQ--EKFPAVV-EKE 183 (210)
T ss_pred ccCCCCccccCCCC-CCEEEEecee---ec-CCCC-------cceEEEeee-------------ECC--EEEEEEE-ecC
Confidence 2 245678999953 4677799994 32 2211 112222222 2 2 1245555 479
Q ss_pred cEEEEccCCccccccccCCCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1368 RHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1368 rvlg~m~HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
|++|+|||||++.. -+++|++|+.+++
T Consensus 184 ~i~GvQFHPE~s~~-------------------~G~~iL~nfl~~~ 210 (210)
T PRK14004 184 NIFGTQFHPEKSHT-------------------HGLKLLENFIEFV 210 (210)
T ss_pred CEEEEeCCcccCch-------------------hHHHHHHHHHhhC
Confidence 99999999998763 4899999998764
|
|
| >CHL00188 hisH imidazole glycerol phosphate synthase subunit hisH; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=192.02 Aligned_cols=191 Identities=18% Similarity=0.144 Sum_probs=133.3
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~ 1224 (1414)
|||+||. +|.+|..++.+||+++|+++.++. ...+++++|+||+||++++.+.+. .+++.++.+.
T Consensus 2 ~~v~iid-~~~GN~~sl~~al~~~g~~v~vv~------~~~~l~~~d~iIlPG~g~~~~~~~--------~l~~~gl~~~ 66 (210)
T CHL00188 2 MKIGIID-YSMGNLHSVSRAIQQAGQQPCIIN------SESELAQVHALVLPGVGSFDLAMK--------KLEKKGLITP 66 (210)
T ss_pred cEEEEEE-cCCccHHHHHHHHHHcCCcEEEEc------CHHHhhhCCEEEECCCCchHHHHH--------HHHHCCHHHH
Confidence 5899995 677778999999999999998886 234678899999999999876553 4555678889
Q ss_pred HHHHHhCCCCeEEEEehhhHHHHhc---------CccCCCCCCCccCCC--CCCCCCeeeecCCCceEEeeEEEEEccC-
Q 000572 1225 FQEFYKRPDTFSLGVCNGCQLMALL---------GWIPGPQVGGVHGAG--GDPSQPRFVHNESGRFECRFSSVTIEDS- 1292 (1414)
Q Consensus 1225 i~~f~~~~~~piLGIC~G~QlL~~l---------gllp~~~g~~~~~~~--~~~~~p~l~~N~s~~fe~r~v~v~i~~~- 1292 (1414)
++++++ .++|+||||+|||+|++. |+++ |.+.+ ++ ...+.|++.|| ++++.++
T Consensus 67 i~~~~~-~~~pvlGIClG~Qll~~~~~~~~~~glg~~~---G~v~~-~~~~~~~~~p~~Gw~----------~v~~~~~~ 131 (210)
T CHL00188 67 IKKWIA-EGNPFIGICLGLHLLFETSEEGKEEGLGIYK---GQVKR-LKHSPVKVIPHMGWN----------RLECQNSE 131 (210)
T ss_pred HHHHHH-cCCCEEEECHHHHHHhhccccCCcCCcccee---EEEEE-CCCCCCCccCccCCc----------cceecCCc
Confidence 999985 799999999999999973 4455 33211 11 12367788877 5555322
Q ss_pred ----CCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCc
Q 000572 1293 ----PAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGR 1368 (1414)
Q Consensus 1293 ----~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGr 1368 (1414)
++++|+++. ..+.+|+.|++ ++. +.. .+..+..+ .| |...-++++.. |+
T Consensus 132 ~~~~~~~lf~~l~-~~~~v~~~HS~---~v~-p~~-------~~~l~~t~--------~~-----~~~~~v~a~~~--~~ 184 (210)
T CHL00188 132 CQNSEWVNWKAWP-LNPWAYFVHSY---GVM-PKS-------QACATTTT--------FY-----GKQQMVAAIEY--DN 184 (210)
T ss_pred ccccCChhhcCCC-CCCEEEEeCcc---Eec-CCC-------CceEEEEE--------ec-----CCcceEEEEec--CC
Confidence 267889984 45677789994 442 211 11222221 13 11123777764 79
Q ss_pred EEEEccCCccccccccCCCCCCCCCCCCCCCChhHHHHHHHHH
Q 000572 1369 HLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1369 vlg~m~HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~ 1411 (1414)
++|+|||||.+.. -+++|++|+..
T Consensus 185 i~GvQFHPE~s~~-------------------~G~~il~nfl~ 208 (210)
T CHL00188 185 IFAMQFHPEKSGE-------------------FGLWLLREFMK 208 (210)
T ss_pred EEEEecCCccccH-------------------hHHHHHHHHHh
Confidence 9999999998732 58899999864
|
|
| >PLN02832 glutamine amidotransferase subunit of pyridoxal 5'-phosphate synthase complex | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.6e-18 Score=186.90 Aligned_cols=202 Identities=17% Similarity=0.148 Sum_probs=122.1
Q ss_pred CCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHH
Q 000572 1144 KPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~ 1223 (1414)
+|||+||.+||..+++ .+||+++|++++.+. .+.+|.++|+|||||||+ +.+. .+..+.++.+
T Consensus 1 ~m~igVLa~qG~~~e~--~~aL~~lG~ev~~v~------~~~~L~~~DgLILPGGfs--~~~~-------~L~~~~gl~~ 63 (248)
T PLN02832 1 MMAIGVLALQGSFNEH--IAALRRLGVEAVEVR------KPEQLEGVSGLIIPGGES--TTMA-------KLAERHNLFP 63 (248)
T ss_pred CcEEEEEeCCCchHHH--HHHHHHCCCcEEEeC------CHHHhccCCEEEeCCCHH--HHHH-------HHHhhcchHH
Confidence 3789999999998555 799999999998886 345788999999999886 3443 2344457999
Q ss_pred HHHHHHhCCCCeEEEEehhhHHHHhcCccCCCC-CCCccCCCCCCCCCeeeecCCCceEEeeE-EEEEccCCCccccCCC
Q 000572 1224 QFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQ-VGGVHGAGGDPSQPRFVHNESGRFECRFS-SVTIEDSPAIMLKGME 1301 (1414)
Q Consensus 1224 ~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~-g~~~~~~~~~~~~p~l~~N~s~~fe~r~v-~v~i~~~~s~~l~g~~ 1301 (1414)
.|++|++ .|+|+||||+|||+|++... .... +.. -...-..+..+|..++...+|. .++|+.- -|- .+.
T Consensus 64 ~I~~~v~-~g~PvLGiC~GmqlLa~~~~-~~~~~~~~----~lg~Ldi~v~RN~~g~qv~sfe~~l~ip~~--gwn-~~~ 134 (248)
T PLN02832 64 ALREFVK-SGKPVWGTCAGLIFLAERAV-GQKEGGQE----LLGGLDCTVHRNFFGSQINSFETELPVPEL--AAS-EGG 134 (248)
T ss_pred HHHHHHH-cCCCEEEEChhHHHHHHHhc-ccccCCcc----eeCCccceEEecccCceeEeEEcCCcCCcc--ccc-ccc
Confidence 9999985 89999999999999998632 1000 100 0011223678899988888873 4555321 010 000
Q ss_pred CcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecC-----CCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCC
Q 000572 1302 GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDD-----DGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHP 1376 (1414)
Q Consensus 1302 g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~-----~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HP 1376 (1414)
-+.++. .+++.+.. ....+.-.+..+|... .-..+.+| |...-+++|. +||++|++|||
T Consensus 135 ~~~~~~--------vFirap~i-~~~~~~v~~l~sy~~~~~~~~~~~a~~~y-----~~~~~~~aV~--qgnvlatqFHP 198 (248)
T PLN02832 135 PETFRA--------VFIRAPAI-LSVGPGVEVLAEYPLPSEKALYSSSTDAE-----GRDKVIVAVK--QGNLLATAFHP 198 (248)
T ss_pred ccccce--------EEecCCce-EeCCCcEEEEEEecccccccccccccccc-----cCCceEEEEE--eCCEEEEEccC
Confidence 001111 01111111 0001111233344210 01123345 4323577886 69999999999
Q ss_pred ccccccccCCC
Q 000572 1377 ERCFLMWQYPW 1387 (1414)
Q Consensus 1377 Er~~~~~q~~~ 1387 (1414)
|++.+.+.|.|
T Consensus 199 Els~d~rih~~ 209 (248)
T PLN02832 199 ELTADTRWHSY 209 (248)
T ss_pred ccCCccHHHHH
Confidence 99998755544
|
|
| >PRK13146 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.1e-17 Score=182.52 Aligned_cols=194 Identities=22% Similarity=0.219 Sum_probs=127.8
Q ss_pred CCEEEEEecCCCcCHHHHHHHHHHcCC--ceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchH
Q 000572 1144 KPKVAVIREEGSNGDREMSAAFYAAGF--EPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPL 1221 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~~~~~~Al~~aG~--~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l 1221 (1414)
+|||+|| ++|.+|.++..+||++.|+ ++..+. .+.+++++|+|||||+.++.+.+. .+...++
T Consensus 1 ~~~~~ii-d~g~gn~~s~~~al~~~g~~~~v~~~~------~~~~l~~~d~lIlpG~~~~~~~~~--------~l~~~~~ 65 (209)
T PRK13146 1 MMTVAII-DYGSGNLRSAAKALERAGAGADVVVTA------DPDAVAAADRVVLPGVGAFADCMR--------GLRAVGL 65 (209)
T ss_pred CCeEEEE-ECCCChHHHHHHHHHHcCCCccEEEEC------CHHHhcCCCEEEECCCCcHHHHHH--------HHHHCCc
Confidence 4789988 5788889999999999999 444443 455689999999999998877765 2333356
Q ss_pred HHHHHHHHhCCCCeEEEEehhhHHHHhcCc----------cCCCCCCCccCCC--CCCCCCeeeecCCCceEEeeEEEEE
Q 000572 1222 LNQFQEFYKRPDTFSLGVCNGCQLMALLGW----------IPGPQVGGVHGAG--GDPSQPRFVHNESGRFECRFSSVTI 1289 (1414)
Q Consensus 1222 ~~~i~~f~~~~~~piLGIC~G~QlL~~lgl----------lp~~~g~~~~~~~--~~~~~p~l~~N~s~~fe~r~v~v~i 1289 (1414)
.+.+.++..+.++|+||||.|||+|++.+. ++ +.+.+..+ .....|++. |..|++
T Consensus 66 ~~~~~~~~~~~~~PvlGiC~G~q~l~~~~~e~~~~~glg~l~---g~v~~~~~~~~~~~~p~~G----------~~~v~~ 132 (209)
T PRK13146 66 GEAVIEAVLAAGRPFLGICVGMQLLFERGLEHGDTPGLGLIP---GEVVRFQPDGPALKVPHMG----------WNTVDQ 132 (209)
T ss_pred HHHHHHHHHhCCCcEEEECHHHHHHhhcccccCCCCCcceEe---EEEEEcCCCCCCCccCccC----------hHHeee
Confidence 667777654478999999999999999743 22 21110000 001233344 446776
Q ss_pred ccCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcE
Q 000572 1290 EDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRH 1369 (1414)
Q Consensus 1290 ~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrv 1369 (1414)
. .++++|+++. ..+.++..|++ .+..+.. .+ .+.+++ | +. .+.++.. ++++
T Consensus 133 ~-~~~~lf~~~~-~~~~v~~~Hs~---~v~~~~~-------~~-~la~s~--------~-----~~--~~~a~~~-~~~i 183 (209)
T PRK13146 133 T-RDHPLFAGIP-DGARFYFVHSY---YAQPANP-------AD-VVAWTD--------Y-----GG--PFTAAVA-RDNL 183 (209)
T ss_pred C-CCChhccCCC-CCCEEEEEeEE---EEEcCCC-------Cc-EEEEEc--------C-----CC--EEEEEEe-cCCE
Confidence 3 4678899984 34677899984 4421111 22 233332 2 22 2444443 5899
Q ss_pred EEEccCCccccccccCCCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1370 LAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1370 lg~m~HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
+|+|||||.+.. .+.+|++|+.+|.
T Consensus 184 ~GvQFHPE~s~~-------------------~G~~ll~nfl~~~ 208 (209)
T PRK13146 184 FATQFHPEKSQD-------------------AGLALLRNFLAWL 208 (209)
T ss_pred EEEEcCCcccHH-------------------HHHHHHHHHHhhc
Confidence 999999997632 5899999988774
|
|
| >PRK13152 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.6e-17 Score=181.00 Aligned_cols=194 Identities=18% Similarity=0.204 Sum_probs=126.5
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|+|+ ++|..|.+++.++|++.|+++..+. .+.++..+|+|||||++++.+.++ .+++.++.+.|+
T Consensus 2 i~ii-d~g~~n~~~v~~~l~~~g~~~~~~~------~~~~l~~~d~lilPG~g~~~~~~~--------~l~~~~~~~~l~ 66 (201)
T PRK13152 2 IALI-DYKAGNLNSVAKAFEKIGAINFIAK------NPKDLQKADKLLLPGVGSFKEAMK--------NLKELGFIEALK 66 (201)
T ss_pred EEEE-ECCCCcHHHHHHHHHHCCCeEEEEC------CHHHHcCCCEEEECCCCchHHHHH--------HHHHcCcHHHHH
Confidence 6777 6899999999999999999888775 344678899999999999988765 444456777888
Q ss_pred HHHhCCCCeEEEEehhhHHHHhcCccCCC-CCCCccCCCCCCCCC-eeee---cCC-CceEEeeEEEEEccCCCccccCC
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALLGWIPGP-QVGGVHGAGGDPSQP-RFVH---NES-GRFECRFSSVTIEDSPAIMLKGM 1300 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~lgllp~~-~g~~~~~~~~~~~~p-~l~~---N~s-~~fe~r~v~v~i~~~~s~~l~g~ 1300 (1414)
++..+.++|+||||.|||+|++.+.-.+. ++- . ..+ ++.+ +.. ...+-.|..+++ ..++++++++
T Consensus 67 ~~~~~~~~pvlGiC~G~Q~l~~~~~~~~~~~~l-----g---~~~g~v~~~~~~~~~~~~~~g~~~v~~-~~~~~l~~~l 137 (201)
T PRK13152 67 EQVLVQKKPILGICLGMQLFLERGYEGGVCEGL-----G---FIEGEVVKFEEDLNLKIPHMGWNELEI-LKQSPLYQGI 137 (201)
T ss_pred HHHHhCCCcEEEECHhHHHHhhcccccCCcCCc-----c---cccEEEEECCCCCCCcCCccCeEEEEE-CCCChhhhCC
Confidence 87534799999999999999986221100 000 0 000 1111 100 011224668887 4568889988
Q ss_pred CCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccc
Q 000572 1301 EGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCF 1380 (1414)
Q Consensus 1301 ~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~ 1380 (1414)
. ..+++++.|+ +++.... ..+ ...++ | |. .-++++. +++++|+|||||.+.
T Consensus 138 ~-~~~~~~~vHS---~~v~~~~--------~~v-~a~~~--------~-----g~-~~~~a~~--~~~i~GvQFHPE~~~ 188 (201)
T PRK13152 138 P-EKSDFYFVHS---FYVKCKD--------EFV-SAKAQ--------Y-----GH-KFVASLQ--KDNIFATQFHPEKSQ 188 (201)
T ss_pred C-CCCeEEEEcc---cEeecCC--------CcE-EEEEC--------C-----CC-EEEEEEe--cCCEEEEeCCCeecC
Confidence 4 3467788999 4442111 112 22222 2 32 1244554 579999999999762
Q ss_pred ccccCCCCCCCCCCCCCCCChhHHHHHHHHHh
Q 000572 1381 LMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 1412 (1414)
Q Consensus 1381 ~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~ 1412 (1414)
. .+.+||+|+.+|
T Consensus 189 ~-------------------~g~~ll~~Fl~~ 201 (201)
T PRK13152 189 N-------------------LGLKLLENFARL 201 (201)
T ss_pred h-------------------hhHHHHHHHHhC
Confidence 1 478899998764
|
|
| >PRK13170 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.4e-17 Score=179.11 Aligned_cols=185 Identities=19% Similarity=0.215 Sum_probs=123.3
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~ 1224 (1414)
|+|+|| ++|..|..+..++|++.|+++.++. .+..++++|+|||||++++.+.+. .++...+.+.
T Consensus 1 m~i~ii-d~g~gn~~s~~~~l~~~g~~~~~v~------~~~~~~~~d~iIlPG~G~~~~~~~--------~l~~~~l~~~ 65 (196)
T PRK13170 1 MNVVII-DTGCANLSSVKFAIERLGYEPVVSR------DPDVILAADKLFLPGVGTAQAAMD--------QLRERELIDL 65 (196)
T ss_pred CeEEEE-eCCCchHHHHHHHHHHCCCeEEEEC------CHHHhCCCCEEEECCCCchHHHHH--------HHHHcChHHH
Confidence 689988 6788889999999999999998886 344678899999999888777665 3334445556
Q ss_pred HHHHHhCCCCeEEEEehhhHHHHhcC----------ccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCC
Q 000572 1225 FQEFYKRPDTFSLGVCNGCQLMALLG----------WIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPA 1294 (1414)
Q Consensus 1225 i~~f~~~~~~piLGIC~G~QlL~~lg----------llp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s 1294 (1414)
+++ .++|+||||.|+|+|++.. +++ +.+.+........|++.|| .|++. .++
T Consensus 66 i~~----~~~PilGIClG~Qll~~~~~~~~~~~~lg~~~---g~v~~~~~~~~~~p~~G~~----------~v~~~-~~~ 127 (196)
T PRK13170 66 IKA----CTQPVLGICLGMQLLGERSEESGGVDCLGIID---GPVKKMTDFGLPLPHMGWN----------QVTPQ-AGH 127 (196)
T ss_pred HHH----cCCCEEEECHHHHHHhhhcccCCCCCCccccc---EEEEECCCCCCCCCccccc----------eeEeC-CCC
Confidence 654 3799999999999999851 222 2211100011234555555 67763 457
Q ss_pred ccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEcc
Q 000572 1295 IMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMP 1374 (1414)
Q Consensus 1295 ~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~ 1374 (1414)
++++++. ..++++..|+ |.++ +. ..+.+ ..+ | |. ..++.. ..++++|+||
T Consensus 128 ~l~~~l~-~~~~v~~~Hs---~~lp-~~--------~~~la-~s~--------~-----~~--~~~~~~-~~~~i~G~QF 177 (196)
T PRK13170 128 PLFQGIE-DGSYFYFVHS---YAMP-VN--------EYTIA-QCN--------Y-----GE--PFSAAI-QKDNFFGVQF 177 (196)
T ss_pred hhhhCCC-cCCEEEEECe---eecC-CC--------CcEEE-Eec--------C-----CC--eEEEEE-EcCCEEEEEC
Confidence 8899884 4577789998 4443 21 11222 111 2 32 233443 3689999999
Q ss_pred CCccccccccCCCCCCCCCCCCCCCChhHHHHHHHHH
Q 000572 1375 HPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1375 HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~ 1411 (1414)
|||++.. .+++|++|+.+
T Consensus 178 HPE~~~~-------------------~G~~~l~nfl~ 195 (196)
T PRK13170 178 HPERSGA-------------------AGAQLLKNFLE 195 (196)
T ss_pred CCCCccc-------------------ccHHHHHHHhh
Confidence 9998743 48899998753
|
|
| >PLN02617 imidazole glycerol phosphate synthase hisHF | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=196.54 Aligned_cols=194 Identities=22% Similarity=0.289 Sum_probs=135.6
Q ss_pred CCCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHH
Q 000572 1143 SKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~ 1222 (1414)
..++|+|+ ++|.+|.+++.++|++.|+++..+. .+.+++++|+||||||+++++.+. .+.+.++.
T Consensus 5 ~~~~i~ii-DyG~GN~~sl~~al~~~G~~v~~v~------~~~~l~~~D~lIlpG~gs~~~~m~--------~L~~~gl~ 69 (538)
T PLN02617 5 ADSEVTLL-DYGAGNVRSVRNAIRHLGFTIKDVQ------TPEDILNADRLIFPGVGAFGSAMD--------VLNNRGMA 69 (538)
T ss_pred CCCeEEEE-ECCCCCHHHHHHHHHHCCCeEEEEC------ChhhhccCCEEEECCCCCHHHHHH--------HHHHcCHH
Confidence 46789988 6899999999999999999998876 345788999999999999988764 45566788
Q ss_pred HHHHHHHhCCCCeEEEEehhhHHHHh----------cCccCCCCCCCccCCC--CCCCCCeeeecCCCceEEeeEEEEEc
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMAL----------LGWIPGPQVGGVHGAG--GDPSQPRFVHNESGRFECRFSSVTIE 1290 (1414)
Q Consensus 1223 ~~i~~f~~~~~~piLGIC~G~QlL~~----------lgllp~~~g~~~~~~~--~~~~~p~l~~N~s~~fe~r~v~v~i~ 1290 (1414)
+.|+++++ .++|+||||.|||||++ +|++| +.+.+ .+ .....|++.| ..+++
T Consensus 70 ~~i~~~i~-~g~PvLGIC~G~QlLa~~~~E~g~~~glg~l~---G~v~~-~~~~~~~~vp~iGw----------~~V~~- 133 (538)
T PLN02617 70 EALREYIQ-NDRPFLGICLGLQLLFESSEENGPVEGLGVIP---GVVGR-FDSSNGLRVPHIGW----------NALQI- 133 (538)
T ss_pred HHHHHHHH-cCCCEEEECHHHHHHhhhhhhcCCccCccccc---ceEEE-CCccCCCCCCeecc----------eEEEe-
Confidence 99999995 89999999999999997 34555 22111 00 0123344554 47776
Q ss_pred cCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEE
Q 000572 1291 DSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHL 1370 (1414)
Q Consensus 1291 ~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvl 1370 (1414)
..++++++++.+. .+++.|++ .+... -......+.+++ | |. .-|+++.. |+++
T Consensus 134 ~~~spL~~~l~~~--~vy~vHSy---~v~~~------p~~~~~v~a~~~--------~-----g~-~~IaAI~~--gnI~ 186 (538)
T PLN02617 134 TKDSELLDGVGGR--HVYFVHSY---RATPS------DENKDWVLATCN--------Y-----GG-EFIASVRK--GNVH 186 (538)
T ss_pred cCCChhHhcCCCc--EEEEEeEE---EEEec------CCCCcEEEEEEc--------c-----CC-CcEEEEEe--CCEE
Confidence 4467899988543 46678984 33111 011233444443 3 11 24788864 7999
Q ss_pred EEccCCccccccccCCCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1371 AMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1371 g~m~HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
|+|||||++.. .+++||+|++.++
T Consensus 187 GVQFHPE~s~~-------------------~G~~L~~nFl~~~ 210 (538)
T PLN02617 187 AVQFHPEKSGA-------------------TGLSILRRFLEPK 210 (538)
T ss_pred EEEcCCccCch-------------------hHHHHHHHHHHhh
Confidence 99999998731 4677888776553
|
|
| >COG0150 PurM Phosphoribosylaminoimidazole (AIR) synthetase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.8e-17 Score=182.43 Aligned_cols=280 Identities=14% Similarity=0.133 Sum_probs=194.0
Q ss_pred CCceeeeccCcceeecCCcc-cccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCc
Q 000572 354 NNSVIGFKDNSSAIKGFPVK-QLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGS 432 (1414)
Q Consensus 354 ~~~~~g~~Ddaavi~~~~~~-~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA 432 (1414)
..+..++|-=+++++-.... ..+. -++++.++.+..+++.+..|+ ..+..+|+.|+||+++. ||
T Consensus 33 ~~v~gglGgf~~lf~l~~~~~~p~L-----v~~tDGVGTKl~~A~~~~k~d--------TiGID~VAM~VNDlv~~--GA 97 (345)
T COG0150 33 PEVMGGLGGFAGLFDLGQAYYKPVL-----VSGTDGVGTKLLLAEDAGKHD--------TIGIDLVAMCVNDLVVQ--GA 97 (345)
T ss_pred cccccCCcceeEEEEccCCCccceE-----EecCCCchHHHHHHHHhCCcc--------ccccchheeecchhhhc--Cc
Confidence 45566677777777754321 1111 124566777777776666676 45777999999999999 99
Q ss_pred eeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccC
Q 000572 433 FVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWL 512 (1414)
Q Consensus 433 ~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~ 512 (1414)
+|++++|.|..|.++ .+.+.++++|+++.|++.|+.+|||.|..++.-+..|+ |+
T Consensus 98 ePl~flDY~A~gk~~----------------------~~~~~~iv~GiaeGc~~ag~aLvGGETAeMPg~y~~g~---yD 152 (345)
T COG0150 98 EPLFFLDYLATGKLD----------------------PEVAAQIVKGIAEGCKQAGCALVGGETAEMPGMYRGGD---YD 152 (345)
T ss_pred chHHHHhhhhcCCCC----------------------HHHHHHHHHHHHHHHHHhCCEEeccccccCCCcccCCc---ee
Confidence 999999999987642 34668999999999999999999999976643332221 33
Q ss_pred CceEEEEEEEeeeCccccc-CCCCCCCEEEEEccCCCcccccHHHHH--HhhhCCCCCccc--cccccCCCHHHHHHHH-
Q 000572 513 KPIMFSGGIGQIDHNHISK-GEPDIGMLVVKIGGPAYRIGMGGGAAS--SMVSGQNDADLD--FNAVQRGDAEMAQKLY- 586 (1414)
Q Consensus 513 ~Plv~~~~vG~v~~~~i~r-~~a~~GD~Ivv~G~~~g~~GlgGaa~s--s~~~~~~~~~~~--~~~Vq~~~p~~e~~l~- 586 (1414)
+..+++|.++++++.. +..++||.|+-+++ .|+|--.+| .+.........+ .+. ..+.+.-+..+.
T Consensus 153 ---laG~~vGvvek~~ii~g~~i~~GDviigl~S----SG~HSNGySLvRKi~~~~~~~~~~~~~~-~~g~~l~e~LL~P 224 (345)
T COG0150 153 ---LAGFAVGVVEKDEIIDGSKVKEGDVIIGLAS----SGLHSNGYSLVRKIIEESGLDYDDELPE-ELGKTLGEELLEP 224 (345)
T ss_pred ---eeeeEEEEEEccccccccccCCCCEEEEecC----CCcCCCchHHHHHHHHhcCccccccCcc-ccccCHHHHhcCC
Confidence 3458999999988654 45899999999886 578843333 332221100000 100 001111111110
Q ss_pred -H-HHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc-CCeEEEEeCCCCCCCCCccHHHHhccccc-----c-------
Q 000572 587 -R-VVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY-PKGAEIDIRAIIVGDHTLSVLEIWGAEYQ-----E------- 651 (1414)
Q Consensus 587 -~-~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~-~~Ga~Idl~~iP~~~~~l~p~ei~~sEsq-----e------- 651 (1414)
| .+++++++.+...|++|-.||.||+...+..+.- +++++||...+|.. |.--|+.+.. |
T Consensus 225 TrIYvk~vL~l~~~~~vkg~AHITGGG~~eNl~Rv~p~~l~a~id~~~~~~p-----~iF~~i~~~G~v~~~EM~rtFNm 299 (345)
T COG0150 225 TRIYVKPVLALIKEGDVKGMAHITGGGFVENLPRVLPEGLGAVIDKPSWPPP-----PIFKWLQKAGNVEREEMYRTFNM 299 (345)
T ss_pred ceeehHHHHHHHhcCCcceEEEecCCChhhhChhhcCccceEEEcCCCCCCc-----HHHHHHHHhcCCCHHHHHHHhcC
Confidence 0 2456777777778999999999999999999987 79999999987543 2223332211 1
Q ss_pred --eeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCC
Q 000572 652 --QDAVLVKPESRDLLQSICERERVSMAVIGTISGEG 686 (1414)
Q Consensus 652 --r~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~ 686 (1414)
-|+++|++++.+++.++++..|.++.+||+|.+..
T Consensus 300 GvG~v~iv~~e~~~~~~~~l~~~g~~a~~iG~V~~~~ 336 (345)
T COG0150 300 GVGMVLIVPEEDAEKALALLKEQGETAYVIGRVEAGE 336 (345)
T ss_pred ccceEEEEcHHHHHHHHHHHHhcCCceEEEEEEEeCC
Confidence 18999999999999999999999999999998753
|
|
| >PRK13143 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.1e-16 Score=168.59 Aligned_cols=193 Identities=25% Similarity=0.297 Sum_probs=125.5
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~ 1224 (1414)
|||+||.+ |.+|..+++++|+++|+++.+++ ...++++||+|+||||+.|+|.+. ..+.+++.
T Consensus 1 ~~~~v~~~-~~~~~~~~~~~l~~~G~~~~~~~------~~~~~~~~d~iii~G~~~~~~~~~----------~~~~~~~~ 63 (200)
T PRK13143 1 MMIVIIDY-GVGNLRSVSKALERAGAEVVITS------DPEEILDADGIVLPGVGAFGAAME----------NLSPLRDV 63 (200)
T ss_pred CeEEEEEC-CCccHHHHHHHHHHCCCeEEEEC------CHHHHccCCEEEECCCCCHHHHHH----------HHHHHHHH
Confidence 68999965 55666899999999999988875 234678999999999888877543 12357888
Q ss_pred HHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCC-eeeec----CCCceEEeeEEEEEccCCCccccC
Q 000572 1225 FQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQP-RFVHN----ESGRFECRFSSVTIEDSPAIMLKG 1299 (1414)
Q Consensus 1225 i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p-~l~~N----~s~~fe~r~v~v~i~~~~s~~l~g 1299 (1414)
++++++ .++|+||||+|+|+|++... . |....++. -.+ ...++ ...++ .|..+++. .+++++++
T Consensus 64 i~~~~~-~~~PilgIC~G~q~l~~~~~-~---g~~~~~lg---~~~g~v~~~~~~~~~~~~--g~~~v~~~-~~~~l~~~ 132 (200)
T PRK13143 64 ILEAAR-SGKPFLGICLGMQLLFESSE-E---GGGVRGLG---LFPGRVVRFPAGVKVPHM--GWNTVKVV-KDCPLFEG 132 (200)
T ss_pred HHHHHH-cCCCEEEECHHHHHHhhhhc-c---CCCCCCcc---eeeEEEEEcCCCCCCCee--cceEEEEc-CCChhhcc
Confidence 999985 89999999999999997421 1 11000000 000 01111 11222 67777774 56889999
Q ss_pred CCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccc
Q 000572 1300 MEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERC 1379 (1414)
Q Consensus 1300 ~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~ 1379 (1414)
+.+. .++..|+ +.+. +. .+.+++.+.+ +|. .-++.+. .++++|+|||||..
T Consensus 133 l~~~--~~~~~Hs---~~~~-~~-------~~~~~la~~~-------------~~~-~~~~~~~--~~~~~gvQfHPE~~ 183 (200)
T PRK13143 133 IDGE--YVYFVHS---YYAY-PD-------DEDYVVATTD-------------YGI-EFPAAVC--NDNVFGTQFHPEKS 183 (200)
T ss_pred CCCc--EEEEEee---eeeC-CC-------CcceEEEEEc-------------CCC-EEEEEEE--cCCEEEEeCCCccc
Confidence 8544 3557887 3332 21 1234555543 122 1244443 46999999999986
Q ss_pred cccccCCCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1380 FLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1380 ~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
.. -+.+||+|+++++
T Consensus 184 ~~-------------------~g~~i~~~f~~~~ 198 (200)
T PRK13143 184 GE-------------------TGLKILENFVELI 198 (200)
T ss_pred hH-------------------HHHHHHHHHHHHH
Confidence 21 3789999998876
|
|
| >PF02769 AIRS_C: AIR synthase related protein, C-terminal domain; InterPro: IPR010918 This entry includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.2e-17 Score=168.97 Aligned_cols=148 Identities=24% Similarity=0.349 Sum_probs=114.5
Q ss_pred CCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhc-cCCceEEEcCCCCcHH
Q 000572 535 DIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGE-TNPIISIHDQGAGGNC 613 (1414)
Q Consensus 535 ~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~-~~~i~a~~DigaGGL~ 613 (1414)
||||.|+++|. +|+||++++......... ..+. +..++..++.+.+ ....+.. .+.++||||+|.|||+
T Consensus 1 k~GD~i~~~g~----~G~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~i~a~~DvSdGGL~ 70 (153)
T PF02769_consen 1 KPGDLIIVTGS----LGLGGSGLLAARKGGESG--GLPD-PLVDAELEPPLLY---AVRALAALKGLIHAAHDVSDGGLA 70 (153)
T ss_dssp STTEEEEEECS----SSHCHHHHHHHHHTHHHT--THHH-CHHHHHHHHHHHH---HHHHHHHHHTTEEEEEEESTTHHH
T ss_pred CCCCEEEEECC----CcHHHHHHHHHHhCcccc--ccch-hhhhHHhhHHHHH---HHHHhhhhhcceEEEEecCCchHH
Confidence 69999999985 789998855443221100 0000 2334455544433 3333334 4899999999999999
Q ss_pred HHHHHHhc--CCeEEEEeCCCCCCCCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCC-CeEEEEEEEcCCeEEE
Q 000572 614 NVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERV-SMAVIGTISGEGRVVL 690 (1414)
Q Consensus 614 ~aL~Ela~--~~Ga~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~-~~~vIG~vt~~~~l~l 690 (1414)
.+|.|||. ++|++|+++++|+.+....+.++|++|++++++++++|++.+++.++++++++ .+++||+|++++++++
T Consensus 71 ~~l~em~~~s~~g~~i~~~~~p~~~~~~~~~~~l~~~~~g~~l~~v~~~~~~~~~~~~~~~g~~~~~~IG~V~~~~~~~v 150 (153)
T PF02769_consen 71 GALAEMAEASGVGAEIDLDKIPLSDELQSPLEMLFSESEGRLLVAVPPEDAEEFLAALKKAGIPNATVIGEVTEGPGLTV 150 (153)
T ss_dssp HHHHHHHHCTTEEEEEEGGGSHHHHHHHHHHHHHHHSSSTEEEEEEEGGGHHHHHHHHHHTTCTTEEEEEEEESSSSEEE
T ss_pred HHHHHHHHhCCcceEEccccchhhhhhhhhhhhhccCCCCCEEEEEcHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCEEE
Confidence 99999999 79999999999987764467889999999999999999999999999999999 5999999999988777
Q ss_pred Ee
Q 000572 691 VD 692 (1414)
Q Consensus 691 ~~ 692 (1414)
..
T Consensus 151 ~v 152 (153)
T PF02769_consen 151 IV 152 (153)
T ss_dssp EE
T ss_pred ec
Confidence 54
|
; PDB: 2Z1F_A 2Z1E_A 2YXZ_D 2V9Y_A 2HS0_A 2HRU_A 2HS3_A 3D54_A 1VK3_A 2HS4_A .... |
| >KOG0623 consensus Glutamine amidotransferase/cyclase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.1e-16 Score=169.20 Aligned_cols=182 Identities=19% Similarity=0.220 Sum_probs=134.9
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|-+| .+|.+|.+++.+|++..||++.+|. .+.++...|.|||||.+.||-.++ .|++.++.+.++
T Consensus 4 v~~l-d~~agn~~si~nal~hlg~~i~~v~------~P~DI~~a~rLIfPGVGnfg~~~D--------~L~~~Gf~eplr 68 (541)
T KOG0623|consen 4 VTLL-DYGAGNVRSIRNALRHLGFSIKDVQ------TPGDILNADRLIFPGVGNFGPAMD--------VLNRTGFAEPLR 68 (541)
T ss_pred EEEE-ecCCccHHHHHHHHHhcCceeeecc------CchhhccCceEeecCcccchHHHH--------HHhhhhhHHHHH
Confidence 4444 7899999999999999999999986 566788999999999999998888 778889999999
Q ss_pred HHHhCCCCeEEEEehhhHHHHh----------cCccCCCCCCCccCCCCC-CCCCeeeecCCCceEEeeEEEEEccCCCc
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMAL----------LGWIPGPQVGGVHGAGGD-PSQPRFVHNESGRFECRFSSVTIEDSPAI 1295 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~----------lgllp~~~g~~~~~~~~~-~~~p~l~~N~s~~fe~r~v~v~i~~~~s~ 1295 (1414)
+++. .|+|++|||.|.|+|++ ||++|+.-++ ++.+ ...|++.|| ...| .+++-
T Consensus 69 ~Yie-sgkPfmgicvGlQaLF~gSvE~p~skGLgvipg~v~R----FD~s~k~VPhIGWN----------sc~v-~sd~e 132 (541)
T KOG0623|consen 69 KYIE-SGKPFMGICVGLQALFDGSVENPPSKGLGVIPGIVGR----FDASAKIVPHIGWN----------SCQV-GSDSE 132 (541)
T ss_pred HHHh-cCCCeEeehhhHHHHhcccccCCCcCcccccccceec----ccCCCCcCCccccc----------cccc-CCccc
Confidence 9995 99999999999999997 5777742222 2222 457899999 4446 45666
Q ss_pred cccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccC
Q 000572 1296 MLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPH 1375 (1414)
Q Consensus 1296 ~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~H 1375 (1414)
||.......+| +.|++ .. ++....+...+-.. .|..| ||..-|++|. .+|+++.|||
T Consensus 133 ffg~~p~~~~Y--FVHSy---l~--~ek~~~len~~wki---------at~kY-----G~E~Fi~ai~--knN~~AtQFH 189 (541)
T KOG0623|consen 133 FFGDVPNRHVY--FVHSY---LN--REKPKSLENKDWKI---------ATCKY-----GSESFISAIR--KNNVHATQFH 189 (541)
T ss_pred ccccCCCceEE--EEeee---cc--cccccCCCCCCceE---------eeecc-----CcHHHHHHHh--cCceeeEecc
Confidence 76544455666 79983 22 22212222222111 13346 8877788885 6999999999
Q ss_pred Ccccccc
Q 000572 1376 PERCFLM 1382 (1414)
Q Consensus 1376 PEr~~~~ 1382 (1414)
||++...
T Consensus 190 PEKSG~a 196 (541)
T KOG0623|consen 190 PEKSGEA 196 (541)
T ss_pred cccccch
Confidence 9998764
|
|
| >PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.2e-15 Score=164.29 Aligned_cols=185 Identities=22% Similarity=0.278 Sum_probs=122.9
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|+|| ++|++|..+..++|++.|++++++. ...++.++|+||+||++++++.+. .++..++.+.++
T Consensus 2 i~vi-d~g~gn~~~~~~~l~~~g~~v~~~~------~~~~l~~~d~lilpG~g~~~~~~~--------~l~~~~~~~~i~ 66 (199)
T PRK13181 2 IAII-DYGAGNLRSVANALKRLGVEAVVSS------DPEEIAGADKVILPGVGAFGQAMR--------SLRESGLDEALK 66 (199)
T ss_pred EEEE-eCCCChHHHHHHHHHHCCCcEEEEc------ChHHhccCCEEEECCCCCHHHHHH--------HHHHCChHHHHH
Confidence 7777 5799999999999999999988874 345678899999999988766553 334456788899
Q ss_pred HHHhCCCCeEEEEehhhHHHHhc---------CccCCCCCCCccCCCCCCCCCeeeecCC---CceEEeeEEEEEccCCC
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALL---------GWIPGPQVGGVHGAGGDPSQPRFVHNES---GRFECRFSSVTIEDSPA 1294 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~l---------gllp~~~g~~~~~~~~~~~~p~l~~N~s---~~fe~r~v~v~i~~~~s 1294 (1414)
++++ .++|+||||.|+|||++. |+++ +. ..++.. ...+-.|..+++. .++
T Consensus 67 ~~~~-~~~PvlGiC~G~Qll~~~~~~~~~~glg~l~---~~-------------v~~~~~~~~~~~~~G~~~v~~~-~~~ 128 (199)
T PRK13181 67 EHVE-KKQPVLGICLGMQLLFESSEEGNVKGLGLIP---GD-------------VKRFRSEPLKVPQMGWNSVKPL-KES 128 (199)
T ss_pred HHHH-CCCCEEEECHhHHHhhhhcccCCcCCcceEE---EE-------------EEEcCCCCCCCCccCccccccC-CCC
Confidence 9885 899999999999999985 2233 11 222211 1123356666663 468
Q ss_pred ccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEcc
Q 000572 1295 IMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMP 1374 (1414)
Q Consensus 1295 ~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~ 1374 (1414)
++++++. ..+.+|..|++ .+..+.. ..+ +..++ | |.. -++.+- +.+++|+||
T Consensus 129 ~lf~~l~-~~~~~~~~Hs~---~v~~~~~-------~~~-lA~s~--------~-----~~~-~~~~~~--~~~i~GvQF 180 (199)
T PRK13181 129 PLFKGIE-EGSYFYFVHSY---YVPCEDP-------EDV-LATTE--------Y-----GVP-FCSAVA--KDNIYAVQF 180 (199)
T ss_pred hhHcCCC-CCCEEEEeCee---EeccCCc-------ccE-EEEEc--------C-----CCE-EEEEEE--CCCEEEEEC
Confidence 8999984 34566788984 3321111 122 22222 1 221 133343 568999999
Q ss_pred CCccccccccCCCCCCCCCCCCCCCChhHHHHHHHHH
Q 000572 1375 HPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1375 HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~ 1411 (1414)
|||.+.. -+.+||+|+.+
T Consensus 181 HPE~~~~-------------------~g~~ll~nfl~ 198 (199)
T PRK13181 181 HPEKSGK-------------------AGLKLLKNFAE 198 (199)
T ss_pred CCccCCH-------------------HHHHHHHHHHh
Confidence 9996521 47888888754
|
|
| >COG0709 SelD Selenophosphate synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-15 Score=168.17 Aligned_cols=278 Identities=15% Similarity=0.129 Sum_probs=191.2
Q ss_pred cchhHHHHHHHHhccCC-CCceee--eccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHH
Q 000572 337 MVRTLMQIVKSTLQANP-NNSVIG--FKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPG 413 (1414)
Q Consensus 337 ~~~~lf~~I~~~~~~~~-~~~~~g--~~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~g 413 (1414)
+|..|-+....+..... ...++| .+|||+|+...+ +..++.+.+ -..|--.|||+-
T Consensus 22 sp~vL~qil~~~~a~~~~~~~lvgn~~~dda~vy~ig~--------------------g~~iIsT~d-f~mpivddp~df 80 (346)
T COG0709 22 SPKVLEQILHGTPAKPDFAKLLVGNETGDDAAVYDLGN--------------------GHSIISTTD-FFMPIVDDPFDF 80 (346)
T ss_pred CHHHHHHHHhcCcCCCCchhHhhcccccCcceeEEecC--------------------CcEEEEecc-eeeecccCcchh
Confidence 45555444433322221 344555 578888887433 333332222 112334599999
Q ss_pred HhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeee
Q 000572 414 AETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQ 493 (1414)
Q Consensus 414 A~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~Gvplvg 493 (1414)
++.+..-.|+|+.|| |++|+-.+.-++|.+ . ..+.++++++..|-.+.|++.|+++.|
T Consensus 81 G~IaAtNaIsDv~am--gg~pi~AiAI~g~~~-----~---------------~l~~~i~~ei~~gg~~~~rea~i~lag 138 (346)
T COG0709 81 GRIAATNAISDVFAM--GGKPIMAIAILGFPN-----D---------------LLDKEIAQEVIEGGRDACREAGIALAG 138 (346)
T ss_pred hhhhhcccccchhhc--CCcchhhhhhcCCcc-----c---------------ccCHHHHHHHHHhhHHHHHHhCccccC
Confidence 999999999999999 999999776666532 1 024679999999999999999999999
Q ss_pred eeeEEeccccCCCCccccCCceEEEEEEEeeeCcccccC-CCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccc
Q 000572 494 GYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISKG-EPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFN 572 (1414)
Q Consensus 494 G~t~s~~~~~~~g~~~~~~~Plv~~~~vG~v~~~~i~r~-~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~ 572 (1414)
||+-. ...|++-..++|.+..+++.|. .+++|+.|+|+- .+|.|--+..-+ .
T Consensus 139 GhsId------------apEP~fGlav~G~~~~~k~~~n~~a~~G~~lilTK----PlG~gil~ta~k------~----- 191 (346)
T COG0709 139 GHSID------------APEPIFGLAVTGIVPTGKVKRNSTAKAGCKLILTK----PLGIGILTTAEK------K----- 191 (346)
T ss_pred CcccC------------CCCcccceeeecccchhhhcccccccCCcEEEEec----Ccccceehhhhh------h-----
Confidence 99841 4578877789999998888765 489999999975 466653221111 0
Q ss_pred cccCCCHHHHHHHHHHH----HHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCCCC---------
Q 000572 573 AVQRGDAEMAQKLYRVV----RACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDH--------- 637 (1414)
Q Consensus 573 ~Vq~~~p~~e~~l~~~i----~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~~~--------- 637 (1414)
+.-.++-.++..+.+ +...+.+..--|++|+|+|+-||.+.+.|||+ ++++++..+.||-.+.
T Consensus 192 --~~L~~e~~~~ale~M~~lN~~~~~~~~~~gv~A~TDVTGfGLlghl~E~ae~s~v~~~lf~~~ip~l~~~e~~~~~g~ 269 (346)
T COG0709 192 --GLLKEEHKGLALENMCTLNKIGAQFAPDFGVAAMTDVTGFGLLGHLKEMAEGAGVDARLFDSPIPFLDGVEFYIENGI 269 (346)
T ss_pred --hccCHHHHHHHHHHHhhhhHHHHHhCccCCcceeecccCchHHHHHHHHHhhcCCcEEEeeccCCCcHHHHHHHHcCC
Confidence 111233333322211 12233333334999999999999999999999 8999999999985532
Q ss_pred ------------------CccHHH-Hhccc--ccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcCC
Q 000572 638 ------------------TLSVLE-IWGAE--YQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEG 686 (1414)
Q Consensus 638 ------------------~l~p~e-i~~sE--sqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~ 686 (1414)
.|+-+. .+++. +++-++++|.|+...++.+++..+++++..||++.+..
T Consensus 270 iP~gt~~n~~s~~~~~~~~l~e~~~~lL~dpqtsgglLiav~~~~~~~~~~i~~e~~~~~~~i~~l~~k~ 339 (346)
T COG0709 270 IPGGTARNFGSYGIFAGKDLPEEQKLLLCDPQTSGGLLIAVVPEGKGEGLEIAPELGIQLIIIGELVAKQ 339 (346)
T ss_pred CcCccccchhHHHHhccccccHHHHHHhcCCCCCCceEEEEecccccchheecchhccceehhhhHHhhc
Confidence 122221 22343 44569999999999999999999999999999988654
|
|
| >PRK13525 glutamine amidotransferase subunit PdxT; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.6e-15 Score=158.93 Aligned_cols=187 Identities=23% Similarity=0.228 Sum_probs=117.3
Q ss_pred CCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHH
Q 000572 1144 KPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~ 1223 (1414)
+|||.|+..+|.+ .++.++|+++|++++.++ .+.++++||+||||||++. ..+ ....+..+.+
T Consensus 1 ~m~~~i~~~~g~~--~~~~~~l~~~g~~~~~~~------~~~~l~~~dgiii~GG~~~--~~~-------~~~~~~~~~~ 63 (189)
T PRK13525 1 MMKIGVLALQGAV--REHLAALEALGAEAVEVR------RPEDLDEIDGLILPGGEST--TMG-------KLLRDFGLLE 63 (189)
T ss_pred CCEEEEEEcccCH--HHHHHHHHHCCCEEEEeC------ChhHhccCCEEEECCCChH--HHH-------HHHHhccHHH
Confidence 4799999998766 455789999999998886 2456889999999999742 221 1223455678
Q ss_pred HHHHHHhCCCCeEEEEehhhHHHHhc-CccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCC
Q 000572 1224 QFQEFYKRPDTFSLGVCNGCQLMALL-GWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEG 1302 (1414)
Q Consensus 1224 ~i~~f~~~~~~piLGIC~G~QlL~~l-gllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g 1302 (1414)
.++++++ .++|+||||.|+|+|++. |= +..++.. .-..++.+|..++-. .+. . .++++.++ +
T Consensus 64 ~i~~~~~-~g~PilGIC~G~QlL~~~~gg-~~~~~lg-------~~~~~v~~~~~g~~~-g~~--~----~~~~~~~~-~ 126 (189)
T PRK13525 64 PLREFIA-SGLPVFGTCAGMILLAKEIEG-YEQEHLG-------LLDITVRRNAFGRQV-DSF--E----AELDIKGL-G 126 (189)
T ss_pred HHHHHHH-CCCeEEEECHHHHHHHhhccc-CCCCcee-------eEEEEEEEccCCCce-eeE--E----ecccccCC-C
Confidence 8999985 899999999999999984 11 0000110 001134455444321 111 1 13456665 3
Q ss_pred cEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccccc
Q 000572 1303 STLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLM 1382 (1414)
Q Consensus 1303 ~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~ 1382 (1414)
+.+++|..|++--... ++ +..++.+.+ +. +.++. .++++|+|||||...
T Consensus 127 ~~~~~~~~H~d~v~~l--p~--------~~~vlA~~~--------------~~---~~~~~--~~~~~g~QfHPE~~~-- 175 (189)
T PRK13525 127 EPFPAVFIRAPYIEEV--GP--------GVEVLATVG--------------GR---IVAVR--QGNILATSFHPELTD-- 175 (189)
T ss_pred CCeEEEEEeCceeecc--CC--------CcEEEEEcC--------------CE---EEEEE--eCCEEEEEeCCccCC--
Confidence 4688899998422111 11 222333221 11 23443 479999999999632
Q ss_pred ccCCCCCCCCCCCCCCCChhHHHHHHHHHhhC
Q 000572 1383 WQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS 1414 (1414)
Q Consensus 1383 ~q~~~~p~~~~~~~~~~spw~~~F~na~~~~~ 1414 (1414)
..++|+|++++|.
T Consensus 176 -------------------~~~~~~~f~~~~~ 188 (189)
T PRK13525 176 -------------------DTRVHRYFLEMVK 188 (189)
T ss_pred -------------------CchHHHHHHHHhh
Confidence 2489999999984
|
|
| >PF02769 AIRS_C: AIR synthase related protein, C-terminal domain; InterPro: IPR010918 This entry includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-15 Score=158.65 Aligned_cols=141 Identities=28% Similarity=0.381 Sum_probs=108.3
Q ss_pred CCCCcEEEEEEcCCCccccchHHHH-HHhhhcCCCCC-CCCChHHHHHHHHHHHHHHhc-cCceEEEeCCCCchHHHHHH
Q 000572 930 LGDDGILLHIDLAKGKRRLGGSALA-QVFDQVGNESP-DLEDVPYLKRVFETVQDLIGD-ELVSTGHDISDGGLLVCTLE 1006 (1414)
Q Consensus 930 ~~Gd~~li~v~lg~~~~~LGGS~la-~~~~~~~~~~p-~v~d~~~lk~~~~~v~~l~~~-g~v~A~hDiSdGGL~~aL~E 1006 (1414)
++|| +|++ +| ...+|++.+. +.+.......| ...++...+.++.....++.. ++++||||+|||||+.+|.|
T Consensus 1 k~GD--~i~~-~g--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~a~~DvSdGGL~~~l~e 75 (153)
T PF02769_consen 1 KPGD--LIIV-TG--SLGLGGSGLLAARKGGESGGLPDPLVDAELEPPLLYAVRALAALKGLIHAAHDVSDGGLAGALAE 75 (153)
T ss_dssp STTE--EEEE-EC--SSSHCHHHHHHHHHTHHHTTHHHCHHHHHHHHHHHHHHHHHHHHHTTEEEEEEESTTHHHHHHHH
T ss_pred CCCC--EEEE-EC--CCcHHHHHHHHHHhCccccccchhhhhHHhhHHHHHHHHHhhhhhcceEEEEecCCchHHHHHHH
Confidence 5786 5565 34 3567788744 33322222222 122455667788888888876 99999999999999999999
Q ss_pred HHhcCCeEEEEEeCCCCC-----chHHHhcccccce-EEEEecCCHHHHHHHHHHcCC-CEEEEEEEeCCCcEEEE
Q 000572 1007 MSFAGNYGITLDLNSEGN-----SLFQTLFAEELGL-VLEVSKSNLDTVSKKLHDAGV-SAEIIGQVNSSHSVEIK 1075 (1414)
Q Consensus 1007 Ma~as~~G~~Idl~~~~~-----~~~~~LFsE~~G~-vl~V~~~~~~~v~~~l~~~gi-~~~~IG~v~~~~~l~i~ 1075 (1414)
||++|++|++|+++.++. .+...||+|+.|. +++|++++.+++++.++++|+ .+++||+|++++.+++.
T Consensus 76 m~~~s~~g~~i~~~~~p~~~~~~~~~~~l~~~~~g~~l~~v~~~~~~~~~~~~~~~g~~~~~~IG~V~~~~~~~v~ 151 (153)
T PF02769_consen 76 MAEASGVGAEIDLDKIPLSDELQSPLEMLFSESEGRLLVAVPPEDAEEFLAALKKAGIPNATVIGEVTEGPGLTVI 151 (153)
T ss_dssp HHHCTTEEEEEEGGGSHHHHHHHHHHHHHHHSSSTEEEEEEEGGGHHHHHHHHHHTTCTTEEEEEEEESSSSEEEE
T ss_pred HHHhCCcceEEccccchhhhhhhhhhhhhccCCCCCEEEEEcHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCEEEe
Confidence 999999999999985431 2246789999996 789999999999999999999 59999999998877664
|
; PDB: 2Z1F_A 2Z1E_A 2YXZ_D 2V9Y_A 2HS0_A 2HRU_A 2HS3_A 3D54_A 1VK3_A 2HS4_A .... |
| >PRK13141 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=7.4e-15 Score=162.11 Aligned_cols=194 Identities=19% Similarity=0.144 Sum_probs=127.3
Q ss_pred EEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHH
Q 000572 1146 KVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQF 1225 (1414)
Q Consensus 1146 kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i 1225 (1414)
+|+||.+.+.| -..+.++|++.|.++.++. ...+++++|+||+|||.++.+.+. .+..+++.+.|
T Consensus 1 ~i~~~d~~~~~-~~~i~~~l~~~G~~v~~~~------~~~~l~~~d~iiipG~~~~~~~~~--------~~~~~~~~~~i 65 (205)
T PRK13141 1 MIAIIDYGMGN-LRSVEKALERLGAEAVITS------DPEEILAADGVILPGVGAFPDAMA--------NLRERGLDEVI 65 (205)
T ss_pred CEEEEEcCCch-HHHHHHHHHHCCCeEEEEC------CHHHhccCCEEEECCCCchHHHHH--------HHHHcChHHHH
Confidence 47888765555 5889999999999999875 335678999999999987666543 22334577888
Q ss_pred HHHHhCCCCeEEEEehhhHHHHhc----CccCCCCCCCccCCCCCCCCCeeeecC---C-CceEEeeEEEEEccCCCccc
Q 000572 1226 QEFYKRPDTFSLGVCNGCQLMALL----GWIPGPQVGGVHGAGGDPSQPRFVHNE---S-GRFECRFSSVTIEDSPAIML 1297 (1414)
Q Consensus 1226 ~~f~~~~~~piLGIC~G~QlL~~l----gllp~~~g~~~~~~~~~~~~p~l~~N~---s-~~fe~r~v~v~i~~~~s~~l 1297 (1414)
+++++ .++|+||||.|+|+|++. |.++ +- ...--+..++. . +.-+..|..+++. ..++++
T Consensus 66 ~~~~~-~~~pvlGIC~G~Qll~~~~~~~~~~~---~l-------g~l~g~v~~~~~~~~~~~~~~g~~~i~~~-~~~~l~ 133 (205)
T PRK13141 66 KEAVA-SGKPLLGICLGMQLLFESSEEFGETE---GL-------GLLPGRVRRFPPEEGLKVPHMGWNQLELK-KESPLL 133 (205)
T ss_pred HHHHH-CCCcEEEECHHHHHhhhccccCCCCC---cc-------ceEEEEEEEcCCCCCCcccEecCccceeC-CCChhh
Confidence 88885 789999999999999985 2111 00 00001123332 1 1235567778774 478899
Q ss_pred cCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCc
Q 000572 1298 KGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPE 1377 (1414)
Q Consensus 1298 ~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPE 1377 (1414)
+++.. .+.++..|++ ....+ .+..++.+.+ +| ..+.++.. +++++|+|||||
T Consensus 134 ~~l~~-~~~v~~~Hs~---~v~~~--------~~~~v~a~~~-------------~~--~~~~a~~~-~~~i~GvQfHPE 185 (205)
T PRK13141 134 KGIPD-GAYVYFVHSY---YADPC--------DEEYVAATTD-------------YG--VEFPAAVG-KDNVFGAQFHPE 185 (205)
T ss_pred hCCCC-CCEEEEECee---EeccC--------CcCeEEEEEe-------------CC--cEEEEEEe-cCCEEEEeCCCc
Confidence 99842 3455578973 33211 1233444433 23 23666765 679999999999
Q ss_pred cccccccCCCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1378 RCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1378 r~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
.... -+.+||+|+.+-|
T Consensus 186 ~~~~-------------------~g~~l~~~fl~~~ 202 (205)
T PRK13141 186 KSGD-------------------VGLKILKNFVEMV 202 (205)
T ss_pred cchH-------------------HHHHHHHHHHHHh
Confidence 7421 4789999987654
|
|
| >COG1973 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.3e-15 Score=163.42 Aligned_cols=261 Identities=19% Similarity=0.261 Sum_probs=174.3
Q ss_pred CccccccCCceEEEEEecc-cCCCCCCCcHHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCC
Q 000572 383 RCQLSESSQDLDVLFTAET-HNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFT 461 (1414)
Q Consensus 383 ~~~~~~~~~~~~i~~~vEt-hn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~ 461 (1414)
||+++.++.+ +++..+++ |...|.- ||-++....-.++||+..| ||+|+|++.-+.+.+ . .
T Consensus 113 DaGvvr~~~~-yivvaiDGiHSRLSef-PFLaGFhvtRAalRDv~vm--Ga~p~alisDiHlaD-----D------g--- 174 (449)
T COG1973 113 DAGVVRIEND-YIVVAIDGIHSRLSEF-PFLAGFHVTRAALRDVYVM--GARPVALISDIHLAD-----D------G--- 174 (449)
T ss_pred CCCeEEecCc-eEEEEecchhhhhhcC-cchhhhHHHHHHHHHHHHc--Ccccceeeeeeeecc-----C------c---
Confidence 3444445444 46677885 5555544 9999999999999999999 999999998886533 1 1
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCCceE-EEEEEEeeeCcccccCCCCCCCEE
Q 000572 462 YPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIM-FSGGIGQIDHNHISKGEPDIGMLV 540 (1414)
Q Consensus 462 ~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~Plv-~~~~vG~v~~~~i~r~~a~~GD~I 540 (1414)
...-+-++..|+...+...|+|+++|.|-..+.+++-|+ -++ -++++|..+.....|..++|||+|
T Consensus 175 -------DVgklfDf~AGvtaVsea~~vPl~aGSTLRiGGDmVlGd------Rl~~~Vg~iGi~k~~~t~Rr~~~~Gd~I 241 (449)
T COG1973 175 -------DVGKLFDFTAGVTAVSEAVGVPLLAGSTLRIGGDMVLGD------RLVGAVGAIGISKSELTPRRRAEPGDVI 241 (449)
T ss_pred -------chhhhhhhhhhhhHHHHHhCCceecccceEEcCeeEeec------hhhcccceeeeecCCCChhccCCCCCEE
Confidence 112234789999999999999999999965544333232 122 347888766433456779999999
Q ss_pred EEEccCCCcccccHHHHHH--hhhCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhccC---CceEEEcCCCCcHHHH
Q 000572 541 VKIGGPAYRIGMGGGAASS--MVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETN---PIISIHDQGAGGNCNV 615 (1414)
Q Consensus 541 vv~G~~~g~~GlgGaa~ss--~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~---~i~a~~DigaGGL~~a 615 (1414)
+++=| .||++.+. ..++- .|-..|-.--+++++|..+.+.+ .++||+|++.||+-++
T Consensus 242 lmTEG------aGGGTi~TTAiY~Gm------------~DVv~ETlnv~fi~a~eai~~s~L~~~vhsMTDVTNGGiRgD 303 (449)
T COG1973 242 LMTEG------AGGGTIATTAIYHGM------------HDVVEETLNVDFIRACEAIVRSGLLSDVHSMTDVTNGGIRGD 303 (449)
T ss_pred EEecC------CCCceeehhhhhccc------------HHHHHHhcChHHHHHHHHHHHhhhhhhhhhhhhccCCccccc
Confidence 99854 45555332 11221 01111111123577776665555 4899999999999999
Q ss_pred HHHHhc--CCeEEEEeCCCCC--CCCCccHHHHh----cccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEEcC-C
Q 000572 616 VKEIIY--PKGAEIDIRAIIV--GDHTLSVLEIW----GAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGE-G 686 (1414)
Q Consensus 616 L~Ela~--~~Ga~Idl~~iP~--~~~~l~p~ei~----~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~-~ 686 (1414)
..|+++ ++++.+|.+++-. .+..+.-++-+ +.-|-..+++.+|++..+.+++..+..|+.+.+||+|++. .
T Consensus 304 A~EISkta~v~lvfDeekv~sliNpkVl~MLeel~ID~lGvSiDslmii~ped~a~~v~k~~~~agvr~~~vG~Vee~~~ 383 (449)
T COG1973 304 ALEISKTAGVSLVFDEEKVRSLINPKVLKMLEELNIDPLGVSIDSLMIIAPEDVADLVKKALRGAGVRAEEVGRVEEGGQ 383 (449)
T ss_pred HHHhhhhcCeeEEEcHHHHHhhcCHHHHHHHHHcCCCccccccceEEEecchhhhHHHHHHHHhcCcceeEEeeeecCCc
Confidence 999999 9999999998742 11111111111 0112233566667777788999999999999999999985 4
Q ss_pred eEEEEe
Q 000572 687 RVVLVD 692 (1414)
Q Consensus 687 ~l~l~~ 692 (1414)
...+.+
T Consensus 384 ~~~l~~ 389 (449)
T COG1973 384 GVILVD 389 (449)
T ss_pred ceEEEE
Confidence 555555
|
|
| >TIGR03800 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.6e-15 Score=158.41 Aligned_cols=175 Identities=21% Similarity=0.190 Sum_probs=110.0
Q ss_pred EEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHH
Q 000572 1146 KVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQF 1225 (1414)
Q Consensus 1146 kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i 1225 (1414)
||+|+..||.++ +..++|+++|+++..++ .+.+++++|+|+||||+++ .++ .+..+..+.+.|
T Consensus 1 ~igvl~~qg~~~--e~~~~l~~~g~~~~~v~------~~~~l~~~d~liipGG~~~--~~~-------~l~~~~~l~~~i 63 (184)
T TIGR03800 1 KIGVLALQGAVR--EHARALEALGVEGVEVK------RPEQLDEIDGLIIPGGEST--TLS-------RLLDKYGMFEPL 63 (184)
T ss_pred CEEEEEccCCHH--HHHHHHHHCCCEEEEEC------ChHHhccCCEEEECCCCHH--HHH-------HHHHhccHHHHH
Confidence 589999999774 46799999999998886 3446889999999999753 222 123345688889
Q ss_pred HHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeE-EEEEccCCCccccCCCCcE
Q 000572 1226 QEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFS-SVTIEDSPAIMLKGMEGST 1304 (1414)
Q Consensus 1226 ~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v-~v~i~~~~s~~l~g~~g~~ 1304 (1414)
+++++ .|+|+||||.|+|+|++.=.-+ .++. .........+|..++..+.+. .+.. +++....
T Consensus 64 ~~~~~-~g~pilGIC~G~qlL~~~~~~~-~~~~------lg~~~~~v~~~~~g~~~~s~~~~l~~--------~~~~~~~ 127 (184)
T TIGR03800 64 RNFIL-SGLPVFGTCAGLIMLAKEIIGQ-KEGY------LGLLDMTVERNAYGRQVDSFEAEVDI--------KGVGDDP 127 (184)
T ss_pred HHHHH-cCCcEEEECHHHHHHHhhhccC-CCCc------cCcEEEEEEeeccCCccccEEEEeec--------ccCCCCc
Confidence 99985 8999999999999999861111 0000 001112467777776554443 1111 2232223
Q ss_pred EEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccccc
Q 000572 1305 LGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLM 1382 (1414)
Q Consensus 1305 ~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~ 1382 (1414)
+..++.|.+-- ..+-+ +..++.+.+ + .+.++ +.++++|+|||||++...
T Consensus 128 ~~~~~~h~~~v---------~~lp~-~~~vla~~~--------------~---~~~a~--~~~~~~gvQfHPE~~~~~ 176 (184)
T TIGR03800 128 ITGVFIRAPKI---------VSVGN-GVEILAKVG--------------N---RIVAV--RQGNILVSSFHPELTDDH 176 (184)
T ss_pred ceEEEEcCCCc---------ccCCC-CeEEEEEeC--------------C---eeEEE--EeCCEEEEEeCCccCCCc
Confidence 56567776421 12211 223344332 2 24455 367999999999987553
|
Pyridoxal 5'-phosphate (PLP) is synthesized by the PdxA/PdxJ pathway in some species (mostly within the gamma subdivision of the proteobacteria) and by the Pdx1/Pdx2 pathway in most other organisms. This family describes Pdx2, the glutaminase subunit of the PLP synthase. |
| >COG0709 SelD Selenophosphate synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-14 Score=162.13 Aligned_cols=249 Identities=16% Similarity=0.091 Sum_probs=175.5
Q ss_pred CcCcEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHHHH
Q 000572 790 TLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYD 869 (1414)
Q Consensus 790 pg~DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~ 869 (1414)
.++|++|..++.+ .+++.|+|+.-++.. |||+-||.|...+++|+.+||++|+.++.++ | ||.+. -..+.+.+
T Consensus 48 ~~dda~vy~ig~g--~~iIsT~df~mpivd-dp~dfG~IaAtNaIsDv~amgg~pi~AiAI~-g--~~~~~-l~~~i~~e 120 (346)
T COG0709 48 TGDDAAVYDLGNG--HSIISTTDFFMPIVD-DPFDFGRIAATNAISDVFAMGGKPIMAIAIL-G--FPNDL-LDKEIAQE 120 (346)
T ss_pred ccCcceeEEecCC--cEEEEecceeeeccc-CcchhhhhhhcccccchhhcCCcchhhhhhc-C--Ccccc-cCHHHHHH
Confidence 3799999999764 789999997666555 9999999999999999999999998777653 3 56432 13566778
Q ss_pred HHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCccccc
Q 000572 870 AATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLG 949 (1414)
Q Consensus 870 ~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~LG 949 (1414)
+..|-.+.|++-|+++.|||+ .. .+ -|-.-.+++|.|+. .+..+.+.+++|+ .+++ +..+|
T Consensus 121 i~~gg~~~~rea~i~lagGhs-Id--------ap--EP~fGlav~G~~~~-~k~~~n~~a~~G~--~lil-----TKPlG 181 (346)
T COG0709 121 VIEGGRDACREAGIALAGGHS-ID--------AP--EPIFGLAVTGIVPT-GKVKRNSTAKAGC--KLIL-----TKPLG 181 (346)
T ss_pred HHHhhHHHHHHhCccccCCcc-cC--------CC--Ccccceeeecccch-hhhcccccccCCc--EEEE-----ecCcc
Confidence 999988999999999999996 21 01 13344466777753 5666777788996 4565 23466
Q ss_pred hHHHHHHhhhcCCCCCCCCChHHHHHHHHHHHH-------HHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCC
Q 000572 950 GSALAQVFDQVGNESPDLEDVPYLKRVFETVQD-------LIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSE 1022 (1414)
Q Consensus 950 GS~la~~~~~~~~~~p~v~d~~~lk~~~~~v~~-------l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~ 1022 (1414)
--++...+.. ..+ .++......+.+.+ +...--|+||.|||..||++.+.|||..+++++++....+
T Consensus 182 ~gil~ta~k~--~~L----~~e~~~~ale~M~~lN~~~~~~~~~~gv~A~TDVTGfGLlghl~E~ae~s~v~~~lf~~~i 255 (346)
T COG0709 182 IGILTTAEKK--GLL----KEEHKGLALENMCTLNKIGAQFAPDFGVAAMTDVTGFGLLGHLKEMAEGAGVDARLFDSPI 255 (346)
T ss_pred cceehhhhhh--hcc----CHHHHHHHHHHHhhhhHHHHHhCccCCcceeecccCchHHHHHHHHHhhcCCcEEEeeccC
Confidence 5555443321 111 12333333333333 3333349999999999999999999999999999987654
Q ss_pred C---------------------------------CchHHH-hccc--ccceEEEEecCCHHHHHHHHHHcCCCEEEEEEE
Q 000572 1023 G---------------------------------NSLFQT-LFAE--ELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQV 1066 (1414)
Q Consensus 1023 ~---------------------------------~~~~~~-LFsE--~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v 1066 (1414)
+ .+.... |... +.|+|+.|.++...++.....+.++++..||++
T Consensus 256 p~l~~~e~~~~~g~iP~gt~~n~~s~~~~~~~~l~e~~~~lL~dpqtsgglLiav~~~~~~~~~~i~~e~~~~~~~i~~l 335 (346)
T COG0709 256 PFLDGVEFYIENGIIPGGTARNFGSYGIFAGKDLPEEQKLLLCDPQTSGGLLIAVVPEGKGEGLEIAPELGIQLIIIGEL 335 (346)
T ss_pred CCcHHHHHHHHcCCCcCccccchhHHHHhccccccHHHHHHhcCCCCCCceEEEEecccccchheecchhccceehhhhH
Confidence 1 000111 2221 225888988888888888888889999999988
Q ss_pred eCCC
Q 000572 1067 NSSH 1070 (1414)
Q Consensus 1067 ~~~~ 1070 (1414)
.+..
T Consensus 336 ~~k~ 339 (346)
T COG0709 336 VAKQ 339 (346)
T ss_pred Hhhc
Confidence 7654
|
|
| >cd01748 GATase1_IGP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS) | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.7e-14 Score=156.81 Aligned_cols=181 Identities=20% Similarity=0.274 Sum_probs=115.0
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|+|| +.|.+|..++.++|++.|+++++++ ...+++++|+||||||.++.+.+. .+...++.+.++
T Consensus 1 i~i~-d~g~~~~~~~~~~l~~~g~~v~v~~------~~~~l~~~d~iiipG~~~~~~~~~--------~~~~~~~~~~i~ 65 (198)
T cd01748 1 IAII-DYGMGNLRSVANALERLGAEVIITS------DPEEILSADKLILPGVGAFGDAMA--------NLRERGLIEALK 65 (198)
T ss_pred CEEE-eCCCChHHHHHHHHHHCCCeEEEEc------ChHHhccCCEEEECCCCcHHHHHH--------HHHHcChHHHHH
Confidence 4566 6799999999999999999999887 233578899999999876544432 234456788899
Q ss_pred HHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCC-eeeecCCC----ceEEeeEEEEEccCCCccccCCC
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQP-RFVHNESG----RFECRFSSVTIEDSPAIMLKGME 1301 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p-~l~~N~s~----~fe~r~v~v~i~~~~s~~l~g~~ 1301 (1414)
++++ .++|+||||.|+|+|++... . +....++ .-.+ ...++..+ .-+-.|..+.+ ..++++|+++.
T Consensus 66 ~~~~-~~~pilGiC~G~q~l~~~~~-~---g~~~~~l---g~~~g~v~~~~~~~~~~~~~~G~~~v~~-~~~~~lf~~l~ 136 (198)
T cd01748 66 EAIA-SGKPFLGICLGMQLLFESSE-E---GGGTKGL---GLIPGKVVRFPASEGLKVPHMGWNQLEI-TKESPLFKGIP 136 (198)
T ss_pred HHHH-CCCcEEEECHHHHHhccccc-c---CCCCCCC---CCcceEEEECCCCCCceEEEeccceEEE-CCCChhhhCCC
Confidence 9985 79999999999999998621 1 0000000 0011 12232211 11335667776 45678889884
Q ss_pred CcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccc
Q 000572 1302 GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERC 1379 (1414)
Q Consensus 1302 g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~ 1379 (1414)
..+.++..|++ .+..+.. ..+ +...+ + |. .+++.+ .+.+++|+|||||.+
T Consensus 137 -~~~~v~~~Hs~---~v~~~~~-------~~~-la~s~--------~-----~~--~~~~~~-~~~~i~GvQFHPE~~ 186 (198)
T cd01748 137 -DGSYFYFVHSY---YAPPDDP-------DYI-LATTD--------Y-----GG--KFPAAV-EKDNIFGTQFHPEKS 186 (198)
T ss_pred -CCCeEEEEeEE---EEecCCc-------ceE-EEEec--------C-----CC--eEEEEE-EcCCEEEEECCCccc
Confidence 35777789984 4422211 122 22222 1 22 234444 367999999999975
|
Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS). IGPS incorporates ammonia derived from glutamine into N1-[(5'-phosphoribulosyl)-formimino]-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to form 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR) and imidazole glycerol phosphate (IGP). The glutamine amidotransferase domain generates the ammonia nucleophile which is channeled from the glutaminase active site to the PRFAR active site. IGPS belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. |
| >COG0311 PDX2 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.1e-15 Score=151.76 Aligned_cols=181 Identities=22% Similarity=0.260 Sum_probs=127.4
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcC-CceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAG-FEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG-~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~ 1223 (1414)
|||+||..||.-.++ ..+++++| +++..|. .+.+|+++|+||||||.|+ .++ +++...++.+
T Consensus 1 m~IGVLalQG~v~EH--~~~l~~~~~~e~~~Vk------~~~dL~~~d~LIiPGGEST--Ti~-------rL~~~~gl~e 63 (194)
T COG0311 1 MKIGVLALQGAVEEH--LEALEKAGGAEVVEVK------RPEDLEGVDGLIIPGGEST--TIG-------RLLKRYGLLE 63 (194)
T ss_pred CeEEEEEecccHHHH--HHHHHhhcCCceEEEc------CHHHhccCcEEEecCccHH--HHH-------HHHHHcCcHH
Confidence 689999999987554 78999995 8888886 5678999999999999985 443 4777888999
Q ss_pred HHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeE-EEEEccCCCccccCCCC
Q 000572 1224 QFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFS-SVTIEDSPAIMLKGMEG 1302 (1414)
Q Consensus 1224 ~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v-~v~i~~~~s~~l~g~~g 1302 (1414)
.|+++++ .|+|++|-|.|+.+|++- +.++. .. ..+..-..+..+|+.||..+.|- .+.|.. . +
T Consensus 64 ~l~~~~~-~G~Pv~GTCAGlIlLake-i~~~~-~~----~~Lg~mdi~V~RNAfGRQ~dSFe~~~di~~--------~-~ 127 (194)
T COG0311 64 PLREFIA-DGLPVFGTCAGLILLAKE-ILDGP-EQ----PLLGLLDVTVRRNAFGRQVDSFETELDIEG--------F-G 127 (194)
T ss_pred HHHHHHH-cCCceEEechhhhhhhhh-hcCCC-CC----cccceEEEEEEccccccccccceeeEEeec--------c-c
Confidence 9999996 899999999999999973 22111 11 01223445789999999988874 455531 1 1
Q ss_pred cE--EEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccc
Q 000572 1303 ST--LGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCF 1380 (1414)
Q Consensus 1303 ~~--~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~ 1380 (1414)
.. +|. .+++.| ...+..+.-++...+. | .|.++. +||++|+.||||.+.
T Consensus 128 ~~~~~~a--------vFIRAP-~I~~vg~~V~vLa~l~---------------~---~iVav~--qgn~LatsFHPELT~ 178 (194)
T COG0311 128 LPFPFPA--------VFIRAP-VIEEVGDGVEVLATLD---------------G---RIVAVK--QGNILATSFHPELTD 178 (194)
T ss_pred CCCcceE--------EEEEcc-eeehhcCcceEeeeeC---------------C---EEEEEE--eCCEEEEecCccccC
Confidence 12 231 233444 3344444445555441 1 366664 799999999999998
Q ss_pred ccccCCC
Q 000572 1381 LMWQYPW 1387 (1414)
Q Consensus 1381 ~~~q~~~ 1387 (1414)
+...|+|
T Consensus 179 D~r~Hey 185 (194)
T COG0311 179 DTRLHEY 185 (194)
T ss_pred CccHHHH
Confidence 8766655
|
|
| >TIGR00888 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit | Back alignment and domain information |
|---|
Probab=99.55 E-value=8.7e-14 Score=151.56 Aligned_cols=180 Identities=19% Similarity=0.229 Sum_probs=117.0
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCc--CEEEEcCCCCchhhhhcccchhHHHhhcchHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEF--RGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~--dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~ 1224 (1414)
|+|+ ++|..+.+.+.++|++.|+++.+++... ...+++.+ |+||||||..... . ....+.
T Consensus 1 i~ii-D~g~~~~~~l~~~l~~~g~~~~~~~~~~---~~~~~~~~~~~glii~Gg~~~~~--~------------~~~~~~ 62 (188)
T TIGR00888 1 ILVL-DFGSQYTQLIARRLRELGVYSELVPNTT---PLEEIREKNPKGIILSGGPSSVY--A------------ENAPRA 62 (188)
T ss_pred CEEE-ECCchHHHHHHHHHHHcCCEEEEEeCCC---CHHHHhhcCCCEEEECCCCCCcC--c------------CCchHH
Confidence 4555 6788888899999999999998887442 12234444 4999999985311 1 112334
Q ss_pred HHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcE
Q 000572 1225 FQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGST 1304 (1414)
Q Consensus 1225 i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~ 1304 (1414)
++.+++ .++|+||||+|||+|+.. ++ |. +.++....+ .|..+++.. .+++|+++. ..
T Consensus 63 i~~~~~-~~~PilGIC~G~Qll~~~--lg---g~-------------v~~~~~~~~--g~~~v~~~~-~~~l~~~~~-~~ 119 (188)
T TIGR00888 63 DEKIFE-LGVPVLGICYGMQLMAKQ--LG---GE-------------VGRAEKREY--GKAELEILD-EDDLFRGLP-DE 119 (188)
T ss_pred HHHHHh-CCCCEEEECHHHHHHHHh--cC---ce-------------EecCCCccc--eeEEEEEec-CCHhhcCCC-CC
Confidence 566664 789999999999999975 33 22 122222222 566777743 467888884 35
Q ss_pred EEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccccccc
Q 000572 1305 LGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQ 1384 (1414)
Q Consensus 1305 ~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q 1384 (1414)
+.+...|+++-... + .+...+.+. +. ..+.|+..++.+++|+|||||++..
T Consensus 120 ~~~~~~H~~~v~~l--~--------~~~~vla~~-------------~~---~~v~a~~~~~~~~~g~QfHPE~~~~--- 170 (188)
T TIGR00888 120 STVWMSHGDKVKEL--P--------EGFKVLATS-------------DN---CPVAAMAHEEKPIYGVQFHPEVTHT--- 170 (188)
T ss_pred cEEEeEccceeecC--C--------CCCEEEEEC-------------CC---CCeEEEEECCCCEEEEeeCCccCCC---
Confidence 66667898653111 1 121222221 11 2488999877899999999998642
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHH
Q 000572 1385 YPWYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1385 ~~~~p~~~~~~~~~~spw~~~F~na~~ 1411 (1414)
..+++||+|+..
T Consensus 171 ---------------~~g~~i~~~f~~ 182 (188)
T TIGR00888 171 ---------------EYGNELLENFVY 182 (188)
T ss_pred ---------------hhhHHHHHHHHH
Confidence 147899999876
|
separate polypeptide chains in most of the Archaea. This N-terminal region would be the smaller subunit. |
| >PRK13527 glutamine amidotransferase subunit PdxT; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.7e-14 Score=155.10 Aligned_cols=178 Identities=19% Similarity=0.220 Sum_probs=112.4
Q ss_pred CEEEEEecCCCcCHH--HHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHH
Q 000572 1145 PKVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~ 1222 (1414)
|||+|+..+|+++++ .+.++|++.|.++..+..++ ..++.+||+||||||++. ..+ ....+..+.
T Consensus 1 ~~i~vl~~~~~~~e~~~~~~~~l~~~g~~~~~~~~~~----~~~l~~~d~iii~GG~~~--~~~-------~~~~~~~~~ 67 (200)
T PRK13527 1 MKIGVLALQGDVEEHIDALKRALDELGIDGEVVEVRR----PGDLPDCDALIIPGGEST--TIG-------RLMKREGIL 67 (200)
T ss_pred CEEEEEEECCccHHHHHHHHHHHHhcCCCeEEEEeCC----hHHhccCCEEEECCCcHH--HHH-------HHHhhccHH
Confidence 589999999999888 67789999999888777543 346788999999999743 221 123445688
Q ss_pred HHHHHHHhCCCCeEEEEehhhHHHHhc-C--ccCCCCCCCccCCCCCCCCC-eeeecCCCceEEeeEEEEEccCCCcccc
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMALL-G--WIPGPQVGGVHGAGGDPSQP-RFVHNESGRFECRFSSVTIEDSPAIMLK 1298 (1414)
Q Consensus 1223 ~~i~~f~~~~~~piLGIC~G~QlL~~l-g--llp~~~g~~~~~~~~~~~~p-~l~~N~s~~fe~r~v~v~i~~~~s~~l~ 1298 (1414)
+.|+++++ .++|+||||+|+|+|++. | .++..... .-...| ++.+|..++...++.. .+.+.
T Consensus 68 ~~i~~~~~-~~~pilGIC~G~Qll~~~~gg~~v~~~~~~------~lG~~~~~v~~~~~g~~~~~~~~-------~~~~~ 133 (200)
T PRK13527 68 DEIKEKIE-EGLPILGTCAGLILLAKEVGDDRVTKTEQP------LLGLMDVTVKRNAFGRQRDSFEA-------EIDLS 133 (200)
T ss_pred HHHHHHHH-CCCeEEEECHHHHHHHhhhcCCccCCCCCc------eeeeeEEEEeeccccCccccEEE-------eEecc
Confidence 89999985 899999999999999986 2 33311100 000111 2445555544333321 12244
Q ss_pred CCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcc
Q 000572 1299 GMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPER 1378 (1414)
Q Consensus 1299 g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr 1378 (1414)
++ +..+.++..|++.-... ++. -++..++ +++ +.++. .++++|+|||||.
T Consensus 134 ~~-~~~~~~~~~H~~~v~~l--p~~-------~~~la~~--------------~~~----~~a~~--~~~~~g~QfHPE~ 183 (200)
T PRK13527 134 GL-DGPFHAVFIRAPAITKV--GGD-------VEVLAKL--------------DDR----IVAVE--QGNVLATAFHPEL 183 (200)
T ss_pred cc-CCcceEEEEcccccccc--CCC-------eEEEEEE--------------CCE----EEEEE--ECCEEEEEeCCCC
Confidence 45 45688888898643222 111 1233322 112 23444 4799999999994
Q ss_pred c
Q 000572 1379 C 1379 (1414)
Q Consensus 1379 ~ 1379 (1414)
.
T Consensus 184 ~ 184 (200)
T PRK13527 184 T 184 (200)
T ss_pred C
Confidence 4
|
|
| >PRK00758 GMP synthase subunit A; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.8e-13 Score=148.51 Aligned_cols=180 Identities=21% Similarity=0.324 Sum_probs=115.5
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCc-CEEEEcCCCCchhhhhcccchhHHHhhcchHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEF-RGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQF 1225 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~-dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i 1225 (1414)
|+|+.+ |....+.+.++|+++|+++.+++... ...+++++ |+||||||.+. . |+ . .+
T Consensus 2 i~iid~-~~~~~~~i~~~l~~~g~~~~~~~~~~---~~~~l~~~~dgivi~Gg~~~----~----~~------~----~~ 59 (184)
T PRK00758 2 IVVVDN-GGQYNHLIHRTLRYLGVDAKIIPNTT---PVEEIKAFEDGLILSGGPDI----E----RA------G----NC 59 (184)
T ss_pred EEEEEC-CCchHHHHHHHHHHcCCcEEEEECCC---CHHHHhhcCCEEEECCCCCh----h----hc------c----cc
Confidence 788865 44445667889999999988876331 23356778 99999999732 1 10 1 12
Q ss_pred HHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEE
Q 000572 1226 QEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTL 1305 (1414)
Q Consensus 1226 ~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~ 1305 (1414)
.+++.+.++|+||||.|||+|+.. ++ |. +.++....+ .|..+.+.. .+.+|+++. ..+
T Consensus 60 ~~~l~~~~~PilGIC~G~Q~L~~a--~G---g~-------------v~~~~~~~~--g~~~i~~~~-~~~l~~~~~-~~~ 117 (184)
T PRK00758 60 PEYLKELDVPILGICLGHQLIAKA--FG---GE-------------VGRGEYGEY--ALVEVEILD-EDDILKGLP-PEI 117 (184)
T ss_pred HHHHHhCCCCEEEEeHHHHHHHHh--cC---cE-------------EecCCCcee--eeEEEEEcC-CChhhhCCC-CCc
Confidence 334423689999999999999986 22 22 222322222 466676643 456778773 456
Q ss_pred EEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccccccC
Q 000572 1306 GVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQY 1385 (1414)
Q Consensus 1306 ~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~ 1385 (1414)
.++..|++.- ..+- .+...+.+. ++| .|.|+...+.+++|+|||||++..
T Consensus 118 ~~~~~H~~~v---------~~l~-~~~~~la~~-------------~~~---~v~a~~~~~~~~~g~QfHPE~~~~---- 167 (184)
T PRK00758 118 RVWASHADEV---------KELP-DGFEILARS-------------DIC---EVEAMKHKEKPIYGVQFHPEVAHT---- 167 (184)
T ss_pred EEEeehhhhh---------hhCC-CCCEEEEEC-------------CCC---CEEEEEECCCCEEEEEcCCccCCC----
Confidence 7778888422 1111 122334332 223 488998877779999999997542
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHhhC
Q 000572 1386 PWYPKNWNVDKKGPSPWLKMFQNAREWCS 1414 (1414)
Q Consensus 1386 ~~~p~~~~~~~~~~spw~~~F~na~~~~~ 1414 (1414)
..+.+||+|++++|.
T Consensus 168 --------------~~g~~l~~~f~~~~~ 182 (184)
T PRK00758 168 --------------EYGEEIFKNFLEICG 182 (184)
T ss_pred --------------chHHHHHHHHHHHHc
Confidence 147899999998874
|
|
| >cd01742 GATase1_GMP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.8e-13 Score=148.04 Aligned_cols=180 Identities=19% Similarity=0.278 Sum_probs=114.7
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|+|+ ++|.++...+.++|+++|+++.+++...- .....++++|+||||||... ..+... +.+ .+
T Consensus 1 i~~i-D~g~~~~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~dgvIl~Gg~~~--~~~~~~---------~~~---~~ 64 (181)
T cd01742 1 ILIL-DFGSQYTHLIARRVRELGVYSEILPNTTP-LEEIKLKNPKGIILSGGPSS--VYEEDA---------PRV---DP 64 (181)
T ss_pred CEEE-ECCCchHHHHHHHHHhcCceEEEecCCCC-hhhhcccCCCEEEECCCccc--cccccc---------chh---hH
Confidence 3455 67999999999999999999998875421 11236788999999999752 111100 111 12
Q ss_pred HHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEEE
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLG 1306 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~ 1306 (1414)
..+ +.++|+||||+|||+|+.+ ++ |. +.++... +-.|..+++. ..+++|+++.. .+.
T Consensus 65 ~~~-~~~~PilGIC~G~Qll~~~--~g---g~-------------v~~~~~~--~~G~~~v~~~-~~~~l~~~~~~-~~~ 121 (181)
T cd01742 65 EIF-ELGVPVLGICYGMQLIAKA--LG---GK-------------VERGDKR--EYGKAEIEID-DSSPLFEGLPD-EQT 121 (181)
T ss_pred HHH-hcCCCEEEEcHHHHHHHHh--cC---Ce-------------EEeCCCC--cceEEEEEec-CCChhhcCCCC-ceE
Confidence 333 3689999999999999984 33 22 1122222 1245566553 45788888853 466
Q ss_pred EEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccccccCC
Q 000572 1307 VWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYP 1386 (1414)
Q Consensus 1307 ~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~~ 1386 (1414)
+...|++.- .++-+ +...+.+. +. ..|.++..++.+++|+|||||++...
T Consensus 122 ~~~~H~~~v---------~~l~~-~~~~la~~-------------~~---~~i~a~~~~~~~~~g~QfHPE~~~~~---- 171 (181)
T cd01742 122 VWMSHGDEV---------VKLPE-GFKVIASS-------------DN---CPVAAIANEEKKIYGVQFHPEVTHTE---- 171 (181)
T ss_pred EEcchhhhh---------hhcCC-CcEEEEeC-------------CC---CCEEEEEeCCCcEEEEEcCCccccCc----
Confidence 667887432 11111 22233321 11 24899998777999999999998531
Q ss_pred CCCCCCCCCCCCCChhHHHHHHH
Q 000572 1387 WYPKNWNVDKKGPSPWLKMFQNA 1409 (1414)
Q Consensus 1387 ~~p~~~~~~~~~~spw~~~F~na 1409 (1414)
.+++||+|+
T Consensus 172 --------------~g~~ll~~f 180 (181)
T cd01742 172 --------------KGKEILKNF 180 (181)
T ss_pred --------------ChHHHHHhh
Confidence 578999984
|
Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase. GMP synthetase is a glutamine amidotransferase from the de novo purine biosynthetic pathway. Glutamine amidotransferase (GATase) activity catalyse the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. GMP synthetase catalyses the amination of the nucleotide precursor xanthosine 5'-monophospahte to form GMP. GMP synthetase belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. |
| >TIGR01855 IMP_synth_hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-13 Score=150.16 Aligned_cols=183 Identities=20% Similarity=0.239 Sum_probs=117.1
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHH-
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQF- 1225 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i- 1225 (1414)
|+|+ ++|..|...+.++|+..|.++.+++ .+.+++++|+||+||+.++.+.+. .+.... .+.+
T Consensus 1 ~~~~-~~~~gn~~~l~~~l~~~g~~v~v~~------~~~~l~~~d~lii~G~~~~~~~~~--------~l~~~~-~~~l~ 64 (196)
T TIGR01855 1 IVII-DYGVGNLGSVKRALKRVGAEPVVVK------DSKEAELADKLILPGVGAFGAAMA--------RLRENG-LDLFV 64 (196)
T ss_pred CEEE-ecCCcHHHHHHHHHHHCCCcEEEEc------CHHHhccCCEEEECCCCCHHHHHH--------HHHHcC-cHHHH
Confidence 3455 6788889999999999999998887 334678899999999887766543 223323 3455
Q ss_pred HHHHhCCCCeEEEEehhhHHHHhcC----------ccCCCCCCCccCCCCCCCCCeeeecCC-CceEEeeEEEEEccCCC
Q 000572 1226 QEFYKRPDTFSLGVCNGCQLMALLG----------WIPGPQVGGVHGAGGDPSQPRFVHNES-GRFECRFSSVTIEDSPA 1294 (1414)
Q Consensus 1226 ~~f~~~~~~piLGIC~G~QlL~~lg----------llp~~~g~~~~~~~~~~~~p~l~~N~s-~~fe~r~v~v~i~~~~s 1294 (1414)
+++++ .++|+||||.|+|+|++.. +++ +. ..++.. ..-+-.|..+++. ..+
T Consensus 65 ~~~~~-~~~pvlGiC~G~Qll~~~~~~~~~~~glg~~~---~~-------------v~~~~~~~~~~~g~~~~~~~-~~~ 126 (196)
T TIGR01855 65 ELVVR-LGKPVLGICLGMQLLFERSEEGGGVPGLGLIK---GN-------------VVKLEARKVPHMGWNEVHPV-KES 126 (196)
T ss_pred HHHHh-CCCCEEEECHHHHHhhhccccCCCCCCcceee---EE-------------EEECCCCCCCcccCeeeeeC-CCC
Confidence 77775 7899999999999999862 222 11 122210 1123345566663 456
Q ss_pred ccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEcc
Q 000572 1295 IMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMP 1374 (1414)
Q Consensus 1295 ~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~ 1374 (1414)
++|+++. ..+.++..|++ .+..+. +.+ +..++ +|.. -++.. .+++++|.||
T Consensus 127 ~l~~~l~-~~~~v~~~Hs~---~v~~~~--------~~~-~a~~~-------------~g~~-~~~~~--~~~~i~GvQF 177 (196)
T TIGR01855 127 PLLNGID-EGAYFYFVHSY---YAVCEE--------EAV-LAYAD-------------YGEK-FPAAV--QKGNIFGTQF 177 (196)
T ss_pred hHHhCCC-CCCEEEEECee---EecCCC--------CcE-EEEEc-------------CCcE-EEEEE--ecCCEEEEEC
Confidence 7888884 45677788984 332221 112 22222 2432 12333 3678999999
Q ss_pred CCccccccccCCCCCCCCCCCCCCCChhHHHHHHHHH
Q 000572 1375 HPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1375 HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~ 1411 (1414)
|||+... -+.+||+|+.+
T Consensus 178 HPE~~~~-------------------~g~~ll~~f~~ 195 (196)
T TIGR01855 178 HPEKSGK-------------------TGLKLLENFLE 195 (196)
T ss_pred CCccCcH-------------------hHHHHHHHHHh
Confidence 9996421 37788888754
|
This model represents the glutamine amidotransferase subunit (or domain, in eukaryotic systems) of imidazole glycerol phosphate synthase. This subunit catalyzes step 5 of histidine biosynthesis from PRPP. The other subunit, the cyclase, catalyzes step 6. |
| >PF01174 SNO: SNO glutamine amidotransferase family; InterPro: IPR002161 Members of this family are involved in the pyridoxine biosynthetic pathway [, ] | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.3e-14 Score=149.88 Aligned_cols=176 Identities=20% Similarity=0.214 Sum_probs=114.0
Q ss_pred EEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHH
Q 000572 1149 VIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEF 1228 (1414)
Q Consensus 1149 Il~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f 1228 (1414)
||..||.. .|-.++|+++|.++..|. .+.+|+++||||||||.|+ .+. +++...++.+.|++|
T Consensus 1 VLALQG~~--~EH~~~l~~lg~~~~~Vr------~~~dL~~~dgLIiPGGEST--ti~-------~ll~~~gL~~~l~~~ 63 (188)
T PF01174_consen 1 VLALQGAF--REHIRMLERLGAEVVEVR------TPEDLEGLDGLIIPGGEST--TIG-------KLLRRYGLFEPLREF 63 (188)
T ss_dssp EESSSSSH--HHHHHHHHHTTSEEEEE-------SGGGGTT-SEEEE-SS-HH--HHH-------HHHHHTTHHHHHHHH
T ss_pred CCccccCh--HHHHHHHHHcCCCeEEeC------CHHHHccCCEEEECCCcHH--HHH-------HHHHHcCCHHHHHHH
Confidence 57788876 445789999999998886 5678999999999999984 443 467778999999999
Q ss_pred HhCCC-CeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeE-EEEEccCCCccccCCCCcEEE
Q 000572 1229 YKRPD-TFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFS-SVTIEDSPAIMLKGMEGSTLG 1306 (1414)
Q Consensus 1229 ~~~~~-~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v-~v~i~~~~s~~l~g~~g~~~~ 1306 (1414)
+. .| +|++|.|.||.||++- +...++. ....-..+..+|+.||..+.|. .+.++. + +..++
T Consensus 64 ~~-~g~~Pv~GTCAGlIlLa~~-v~~~~q~------~Lg~ldi~V~RNafGrQ~~SFe~~l~i~~--------~-~~~~~ 126 (188)
T PF01174_consen 64 IR-SGSKPVWGTCAGLILLAKE-VEGQGQP------LLGLLDITVRRNAFGRQLDSFEADLDIPG--------L-GEPFP 126 (188)
T ss_dssp HH-TT--EEEEETHHHHHHEEE-ECSSCCT------SS--EEEEEETTTTCSSSCEEEEEEEETT--------T-ESEEE
T ss_pred HH-cCCCceeehhHHHHHhhhh-hhhcccc------cccceeEEEEccccccchhcEEEEEEeec--------C-CCcEE
Confidence 96 66 9999999999999973 2221110 1122334689999999988874 666632 1 13455
Q ss_pred EEEeeccceEEeCChhhHHHHh--hcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccc-cc
Q 000572 1307 VWAAHGEGRAYFPDDGVLDRIL--HSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL-MW 1383 (1414)
Q Consensus 1307 ~~~~HgeGr~~~~~~~~~~~l~--~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~-~~ 1383 (1414)
. .+++.|.. .++. +...|..+| || .|-++. +||++|+-||||.+.+ ..
T Consensus 127 a--------vFIRAP~I-~~v~~~~~v~vla~~---------------~g---~iVav~--qgn~latsFHPELT~D~~r 177 (188)
T PF01174_consen 127 A--------VFIRAPVI-EEVGSPEGVEVLAEL---------------DG---KIVAVR--QGNILATSFHPELTDDDTR 177 (188)
T ss_dssp E--------EESS--EE-EEE--TTTEEEEEEE---------------TT---EEEEEE--ETTEEEESS-GGGSSTHCH
T ss_pred E--------EEcCCcEE-EEeeccccccccccc---------------cc---ceEEEE--ecCEEEEEeCCcccCchhH
Confidence 3 33444422 2222 122333333 13 355564 7999999999999998 76
Q ss_pred cCCC
Q 000572 1384 QYPW 1387 (1414)
Q Consensus 1384 q~~~ 1387 (1414)
-|.|
T Consensus 178 ~H~y 181 (188)
T PF01174_consen 178 IHEY 181 (188)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6655
|
The regulation of cellular growth and proliferation in response to environmental cues is critical for development and the maintenance of viability in all organisms. In unicellular organisms, such as the budding yeast Saccharomyces cerevisiae (Baker's yeast), growth and proliferation are regulated by nutrient availability. Pyridoxal 5'-phosphate (PLP) is synthesized by the PdxA/PdxJ pathway in some species (mostly within the gamma subdivision of the proteobacteria) and by the Pdx1/Pdx2 pathway in most other organisms. This family describes PdxT, the glutaminase subunit of the PLP synthase. It is involved in the hydrolysis of glutamine to glutamate and ammonia, channeling an ammonia molecule to PdxS. ; PDB: 2ISS_D 4ADS_J 2ABW_B 2YWD_A 2NV0_A 2NV2_N 1R9G_A 1Q7R_A 2YWJ_A. |
| >COG1973 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.5e-13 Score=149.23 Aligned_cols=265 Identities=17% Similarity=0.202 Sum_probs=175.9
Q ss_pred cCcEEEEEecCCCceEeEEEEcc-CCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHHHH
Q 000572 791 LADVAVIAQTYTDLTGGACAIGE-QPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYD 869 (1414)
Q Consensus 791 g~DaAVi~~~~~~~~gla~s~g~-~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l~~ 869 (1414)
.||++|++... ..+++++|. |.++++ -|+.+|..+-..|+||+..||++|++.+ |. ..... +++-..+++
T Consensus 111 ~DDaGvvr~~~---~yivvaiDGiHSRLSe-fPFLaGFhvtRAalRDv~vmGa~p~ali--sD-iHlaD--DgDVgklfD 181 (449)
T COG1973 111 LDDAGVVRIEN---DYIVVAIDGIHSRLSE-FPFLAGFHVTRAALRDVYVMGARPVALI--SD-IHLAD--DGDVGKLFD 181 (449)
T ss_pred cCCCCeEEecC---ceEEEEecchhhhhhc-CcchhhhHHHHHHHHHHHHcCcccceee--ee-eeecc--Ccchhhhhh
Confidence 58999999875 378888876 555655 8999999999999999999999995522 11 11222 355678999
Q ss_pred HHHHHHHHHHHhCCcccccccccccccccCCcee-ecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCcccc
Q 000572 870 AATALAEAMIELGIAIDGGKDSLSMAAYSGGEVV-KAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRL 948 (1414)
Q Consensus 870 ~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v-~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~L 948 (1414)
+..|+...|+..|||+++|.|-.- +|+-| --..+-.|.++|...+ ....+.-++||| +|++-=|.+-+.+
T Consensus 182 f~AGvtaVsea~~vPl~aGSTLRi-----GGDmVlGdRl~~~Vg~iGi~k~--~~t~Rr~~~~Gd--~IlmTEGaGGGTi 252 (449)
T COG1973 182 FTAGVTAVSEAVGVPLLAGSTLRI-----GGDMVLGDRLVGAVGAIGISKS--ELTPRRRAEPGD--VILMTEGAGGGTI 252 (449)
T ss_pred hhhhhhHHHHHhCCceecccceEE-----cCeeEeechhhcccceeeeecC--CCChhccCCCCC--EEEEecCCCCcee
Confidence 999999999999999999987322 22211 1123444567776642 233344467997 5555122222222
Q ss_pred chHHHHHHhhhcCCCCCCCCChHH-HHHHHHHHHHHHhccC---ceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCCC-
Q 000572 949 GGSALAQVFDQVGNESPDLEDVPY-LKRVFETVQDLIGDEL---VSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEG- 1023 (1414)
Q Consensus 949 GGS~la~~~~~~~~~~p~v~d~~~-lk~~~~~v~~l~~~g~---v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~~- 1023 (1414)
..++++ ++ .+++ -.+. -.++.++++.++++++ |+||.|++.||+=++..|++.-.++++.+|.++.-
T Consensus 253 ~TTAiY--~G-----m~DV-v~ETlnv~fi~a~eai~~s~L~~~vhsMTDVTNGGiRgDA~EISkta~v~lvfDeekv~s 324 (449)
T COG1973 253 ATTAIY--HG-----MHDV-VEETLNVDFIRACEAIVRSGLLSDVHSMTDVTNGGIRGDALEISKTAGVSLVFDEEKVRS 324 (449)
T ss_pred ehhhhh--cc-----cHHH-HHHhcChHHHHHHHHHHHhhhhhhhhhhhhccCCcccccHHHhhhhcCeeEEEcHHHHHh
Confidence 222322 11 1222 0011 1345556666666664 89999999999999999999999999999877520
Q ss_pred -Cch--HHHh-------cccccc-eEEEEecCCHHHHHHHHHHcCCCEEEEEEEeCC-CcEEEEECCEEE
Q 000572 1024 -NSL--FQTL-------FAEELG-LVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSS-HSVEIKVDGLTH 1081 (1414)
Q Consensus 1024 -~~~--~~~L-------FsE~~G-~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~-~~l~i~~~g~~i 1081 (1414)
.+| +..| |+-+.- +++-.|++..+.+.+.++..|+.+..||.|.++ ....+..+|++.
T Consensus 325 liNpkVl~MLeel~ID~lGvSiDslmii~ped~a~~v~k~~~~agvr~~~vG~Vee~~~~~~l~~~gee~ 394 (449)
T COG1973 325 LINPKVLKMLEELNIDPLGVSIDSLMIIAPEDVADLVKKALRGAGVRAEEVGRVEEGGQGVILVDGGEER 394 (449)
T ss_pred hcCHHHHHHHHHcCCCccccccceEEEecchhhhHHHHHHHHhcCcceeEEeeeecCCcceEEEECCEee
Confidence 122 1111 222222 355567777888999999999999999999985 455677888763
|
|
| >PRK06895 putative anthranilate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.3e-13 Score=145.63 Aligned_cols=186 Identities=15% Similarity=0.125 Sum_probs=118.3
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~ 1224 (1414)
|||+||..+.+.... +.++|++.|.++.+++..+. ....++++|+|||.||....+.. +.+.+.
T Consensus 2 ~~iliid~~dsf~~~-i~~~l~~~g~~~~v~~~~~~--~~~~l~~~d~iIi~gGp~~~~~~-------------~~~~~~ 65 (190)
T PRK06895 2 TKLLIINNHDSFTFN-LVDLIRKLGVPMQVVNVEDL--DLDEVENFSHILISPGPDVPRAY-------------PQLFAM 65 (190)
T ss_pred cEEEEEeCCCchHHH-HHHHHHHcCCcEEEEECCcc--ChhHhccCCEEEECCCCCChHHh-------------hHHHHH
Confidence 689999988887655 89999999999999875432 23467889999999887532211 123455
Q ss_pred HHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcE
Q 000572 1225 FQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGST 1304 (1414)
Q Consensus 1225 i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~ 1304 (1414)
|++ + +.++|+||||.|+|+|+.. ++ |++.+ ....++. .|..+++ ..++++|+++. ..
T Consensus 66 i~~-~-~~~~PiLGIClG~Qlla~~--~G---g~V~~----~~~~~~g----------~~~~v~~-~~~~~l~~~~~-~~ 122 (190)
T PRK06895 66 LER-Y-HQHKSILGVCLGHQTLCEF--FG---GELYN----LNNVRHG----------QQRPLKV-RSNSPLFDGLP-EE 122 (190)
T ss_pred HHH-h-cCCCCEEEEcHHHHHHHHH--hC---CeEee----cCCCccC----------ceEEEEE-CCCChhhhcCC-Cc
Confidence 665 4 3789999999999999986 32 22100 0011111 2445555 34688999984 34
Q ss_pred EEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccccccc
Q 000572 1305 LGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQ 1384 (1414)
Q Consensus 1305 ~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q 1384 (1414)
+.++..|++. +..+ . +- .+..+... | ++ .-++++-..+-+++|+|||||+....
T Consensus 123 ~~v~~~Hs~~---v~~~-~---lp-~~l~~~a~----------~---~~---~~i~a~~~~~~pi~GvQFHPE~~~~~-- 176 (190)
T PRK06895 123 FNIGLYHSWA---VSEE-N---FP-TPLEITAV----------C---DE---NVVMAMQHKTLPIYGVQFHPESYISE-- 176 (190)
T ss_pred eEEEcchhhe---eccc-c---cC-CCeEEEEE----------C---CC---CcEEEEEECCCCEEEEEeCCCcCCCc--
Confidence 5666789853 3211 1 11 12222221 1 11 24788887555699999999985431
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHH
Q 000572 1385 YPWYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1385 ~~~~p~~~~~~~~~~spw~~~F~na~~ 1411 (1414)
.+.+|++|..+
T Consensus 177 ----------------~g~~il~nf~~ 187 (190)
T PRK06895 177 ----------------FGEQILRNWLA 187 (190)
T ss_pred ----------------chHHHHHHHHh
Confidence 36788988765
|
|
| >PF00586 AIRS: AIR synthase related protein, N-terminal domain; InterPro: IPR000728 This family includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.3e-14 Score=138.91 Aligned_cols=96 Identities=21% Similarity=0.200 Sum_probs=76.1
Q ss_pred ccCcceeecCCcccccccCCCCCccccccCCceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeEEEeEE
Q 000572 361 KDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAG 440 (1414)
Q Consensus 361 ~Ddaavi~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~ 440 (1414)
|||||||+.+.+..++ ..+..+.+++|+..++||.+|++++.+++||+++| ||+|++++++
T Consensus 1 GdDaavi~~~~~~~~~-----------------~~~d~~~~~~~~~~~~p~~~g~~av~~~~sDl~a~--Ga~P~~~~~~ 61 (96)
T PF00586_consen 1 GDDAAVIRIPDGKRLV-----------------VSTDGFGTSVHFAFMDPYDGGWKAVAEALSDLAAM--GAKPLAILDS 61 (96)
T ss_dssp TSSSEEEEETSTEEEE-----------------EEEEEEETHHHHHTCTHHHHHHHHHHHHHHHHHTT--TEEEEEEEEE
T ss_pred CCceEEEEcCCCCeEE-----------------EEEEeccCcccccccCHHHHHHHHHHHHHHHHHhc--CCeeeEEEEE
Confidence 6899999854322221 12234556666668899999999999999999999 9999999999
Q ss_pred EEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeee
Q 000572 441 YCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYT 496 (1414)
Q Consensus 441 l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t 496 (1414)
++++++. ..+.++++++|++++|+++|+|++||||
T Consensus 62 l~~~~~~---------------------~~~~l~~~~~Gi~~~~~~~g~~ivGG~T 96 (96)
T PF00586_consen 62 LGLPNPE---------------------SPEELKEIVKGIAEACREFGIPIVGGDT 96 (96)
T ss_dssp EEESTTS---------------------BHHHHHHHHHHHHHHHHHHT-EEEEEEE
T ss_pred EEcCCCC---------------------CHHHHHHHHHHHHHHHHHhCCcEeCcCC
Confidence 9985421 3456899999999999999999999997
|
; GO: 0003824 catalytic activity; PDB: 3VIU_A 2Z1T_A 2Z1U_A 3C9U_B 3C9S_A 3C9R_A 1VQV_A 3C9T_B 3M84_A 3QTY_A .... |
| >PRK00074 guaA GMP synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.5e-13 Score=164.85 Aligned_cols=184 Identities=21% Similarity=0.328 Sum_probs=121.7
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCc--CEEEEcCCCCchhhhhcccchhHHHhhcchHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEF--RGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~--dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~ 1222 (1414)
.+|+||.+ |+.+.+.+.++++++|+.+++++.+. ....++++ |+||||||.+. ..+.+. +.+.
T Consensus 4 ~~i~vlD~-Gsq~~~li~r~lrelg~~~~v~p~~~---~~~~l~~~~~dgIIlsGGp~s--v~~~~~---------p~~~ 68 (511)
T PRK00074 4 DKILILDF-GSQYTQLIARRVRELGVYSEIVPYDI---SAEEIRAFNPKGIILSGGPAS--VYEEGA---------PRAD 68 (511)
T ss_pred CEEEEEEC-CCCcHHHHHHHHHHCCCeEEEEECCC---CHHHHhccCCCEEEECCCCcc--cccCCC---------cccc
Confidence 47999965 88888889999999999999887442 12345555 99999999862 222111 1111
Q ss_pred HHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCC
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEG 1302 (1414)
Q Consensus 1223 ~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g 1302 (1414)
+..++ .++|+||||.|||+|+.+ ++ |. +.++....| .|..+++. .++++|+++.
T Consensus 69 ---~~i~~-~~~PvLGIC~G~QlLa~~--lG---G~-------------V~~~~~~e~--G~~~i~i~-~~~~Lf~~l~- 122 (511)
T PRK00074 69 ---PEIFE-LGVPVLGICYGMQLMAHQ--LG---GK-------------VERAGKREY--GRAELEVD-NDSPLFKGLP- 122 (511)
T ss_pred ---HHHHh-CCCCEEEECHHHHHHHHH--hC---Ce-------------EEecCCccc--ceEEEEEc-CCChhhhcCC-
Confidence 23343 689999999999999985 22 22 222222222 46677774 3578999984
Q ss_pred cEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccccc
Q 000572 1303 STLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLM 1382 (1414)
Q Consensus 1303 ~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~ 1382 (1414)
..+.+|.+|++.-... ++ +-..+.+ +++ ..++++.+.+++++|+|||||++..
T Consensus 123 ~~~~v~~~H~d~V~~l--p~--------g~~vlA~-------------s~~---~~v~ai~~~~~~i~GvQFHPE~~~t- 175 (511)
T PRK00074 123 EEQDVWMSHGDKVTEL--PE--------GFKVIAS-------------TEN---CPIAAIANEERKFYGVQFHPEVTHT- 175 (511)
T ss_pred CceEEEEECCeEEEec--CC--------CcEEEEE-------------eCC---CCEEEEEeCCCCEEEEeCCCCcCCc-
Confidence 3588899999642111 11 2223332 222 2489999889999999999998742
Q ss_pred ccCCCCCCCCCCCCCCCChhHHHHHHHH-Hhh
Q 000572 1383 WQYPWYPKNWNVDKKGPSPWLKMFQNAR-EWC 1413 (1414)
Q Consensus 1383 ~q~~~~p~~~~~~~~~~spw~~~F~na~-~~~ 1413 (1414)
+ .+++||+|+. +.|
T Consensus 176 ------~-----------~G~~il~nFl~~i~ 190 (511)
T PRK00074 176 ------P-----------QGKKLLENFVFDIC 190 (511)
T ss_pred ------h-----------hHHHHHHHHHHHhc
Confidence 1 4789999987 443
|
|
| >PLN02347 GMP synthetase | Back alignment and domain information |
|---|
Probab=99.46 E-value=2e-12 Score=160.10 Aligned_cols=186 Identities=16% Similarity=0.187 Sum_probs=117.7
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCcc--CcCEEEEcCCCCchhhhhcccchhHHHhhcchHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLD--EFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~--~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~ 1222 (1414)
.+|+||.+ |...-+.+.+++++.|..+++++.+. ....+. ++|+||||||.+... ..+..| +.
T Consensus 11 ~~IlIID~-G~~~t~~I~r~lrelgv~~~v~p~~~---~~~~i~~~~~dgIILsGGP~sv~--~~~~p~---------~~ 75 (536)
T PLN02347 11 DVVLILDY-GSQYTHLITRRVRELGVYSLLLSGTA---SLDRIASLNPRVVILSGGPHSVH--VEGAPT---------VP 75 (536)
T ss_pred CEEEEEEC-CCcHHHHHHHHHHHCCCeEEEEECCC---CHHHHhcCCCCEEEECCCCCccc--ccCCch---------hh
Confidence 37999965 66667778999999999998886331 122333 589999999974321 111111 22
Q ss_pred HHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCC
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEG 1302 (1414)
Q Consensus 1223 ~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g 1302 (1414)
+.+.+++.+.++|+||||.|||+|+.. ++ |. +.++.. .+-.|..+++ ...+++|+++..
T Consensus 76 ~~i~~~~~~~~iPILGIClG~QlLa~a--lG---G~-------------V~~~~~--~e~G~~~v~i-~~~~~Lf~~l~~ 134 (536)
T PLN02347 76 EGFFDYCRERGVPVLGICYGMQLIVQK--LG---GE-------------VKPGEK--QEYGRMEIRV-VCGSQLFGDLPS 134 (536)
T ss_pred HHHHHHHHhcCCcEEEECHHHHHHHHH--cC---CE-------------EEecCC--cccceEEEEE-cCCChhhhcCCC
Confidence 233333334689999999999999985 33 22 112211 1224667777 345788999853
Q ss_pred -cEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccc
Q 000572 1303 -STLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1303 -~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~ 1381 (1414)
..+.+|.+|++ .+..- ..+...+.+++ +| .|+++.+++++++|+|||||.+..
T Consensus 135 ~~~~~v~~~Hsd---~V~~l-------P~g~~vlA~s~-------------~~---~iaai~~~~~~i~GvQFHPE~~~t 188 (536)
T PLN02347 135 GETQTVWMSHGD---EAVKL-------PEGFEVVAKSV-------------QG---AVVAIENRERRIYGLQYHPEVTHS 188 (536)
T ss_pred CceEEEEEEEEE---EeeeC-------CCCCEEEEEeC-------------CC---cEEEEEECCCCEEEEEccCCCCcc
Confidence 35788999984 22111 11322333322 23 389999889999999999998532
Q ss_pred cccCCCCCCCCCCCCCCCChhHHHHHHHH
Q 000572 1382 MWQYPWYPKNWNVDKKGPSPWLKMFQNAR 1410 (1414)
Q Consensus 1382 ~~q~~~~p~~~~~~~~~~spw~~~F~na~ 1410 (1414)
..+++|++|++
T Consensus 189 ------------------~~G~~iL~NFl 199 (536)
T PLN02347 189 ------------------PKGMETLRHFL 199 (536)
T ss_pred ------------------chHHHHHHHHH
Confidence 14777777775
|
|
| >KOG0237 consensus Glycinamide ribonucleotide synthetase (GARS)/Aminoimidazole ribonucleotide synthetase (AIRS) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.3e-13 Score=156.31 Aligned_cols=252 Identities=15% Similarity=0.194 Sum_probs=176.7
Q ss_pred cccccCCceEEEEEecccCCCCCCCcHHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCC
Q 000572 385 QLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPS 464 (1414)
Q Consensus 385 ~~~~~~~~~~i~~~vEthn~p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~ 464 (1414)
+++.++.++.|++..+-|+ ..+..-++.+++|+.+. ||+|++++|.|.-|.++++
T Consensus 494 ~tdGVGtKl~iA~~~~~hd--------tvG~DlvAm~vNDii~~--gAePl~FLDYfa~gkLd~~--------------- 548 (788)
T KOG0237|consen 494 GTDGVGTKLKIAQETNIHD--------TVGIDLVAMNVNDIIVQ--GAEPLFFLDYFATGKLDVS--------------- 548 (788)
T ss_pred eccCccceeehhhhhCccc--------ccceeeeeeehhhHhhc--CCcceeehhhhhhcccchH---------------
Confidence 4666777766664444443 24566889999999999 9999999999998876433
Q ss_pred CCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccccCCceEEEEEEEeeeCccccc--CCCCCCCEEEE
Q 000572 465 NLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISK--GEPDIGMLVVK 542 (1414)
Q Consensus 465 ~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~Plv~~~~vG~v~~~~i~r--~~a~~GD~Ivv 542 (1414)
...+++.|+++.|.+.|+.++||.|..+..-|..|+ |+ ...+++|.+++..+.. +...+||+|+=
T Consensus 549 -------va~~~v~gia~gC~qa~CaLvGGETaEMP~~Y~~g~---yD---laG~Avga~e~~~iLp~~~ei~~GDVllG 615 (788)
T KOG0237|consen 549 -------VAEQVVKGIAEGCRQAGCALVGGETAEMPGMYAPGE---YD---LAGFAVGAVERTDILPKLNEIVAGDVLLG 615 (788)
T ss_pred -------HHHHHHHHHHHHHhhccceeeccccccCCCCCCCCc---cc---cccceEeeeeccCcCCCccccccCcEEEe
Confidence 457899999999999999999999987765555553 54 3447899998876543 34899998665
Q ss_pred EccCCCcccccHHHHHH--hhhCCC----CCccccc-cccCCCHHHHH-HHHHHHHHHHHhhccCCceEEEcCCCCcHHH
Q 000572 543 IGGPAYRIGMGGGAASS--MVSGQN----DADLDFN-AVQRGDAEMAQ-KLYRVVRACIEMGETNPIISIHDQGAGGNCN 614 (1414)
Q Consensus 543 ~G~~~g~~GlgGaa~ss--~~~~~~----~~~~~~~-~Vq~~~p~~e~-~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~ 614 (1414)
+- ..|+|--.||- ...... ....... ....++..+.. ++ .++..+-+..++.++++-.|+.|||.-
T Consensus 616 L~----SsGvHSNGfSLvrkil~~~~l~~~~~~P~~~~~tlGd~LL~pTki--Yvk~ll~~i~~g~vkg~AHITGGGl~E 689 (788)
T KOG0237|consen 616 LP----SSGVHSNGFSLVRKILARSGLSYKDPLPWDSSKTLGDELLAPTKI--YVKQLLPLIRKGGVKGLAHITGGGLTE 689 (788)
T ss_pred cc----ccccccCcHHHHHHHHHhcCCccCCCCCCCcccchhhhhccccEE--ehhhhHHHHHhcccceeeeecCCCccc
Confidence 43 46788544442 221111 1111111 11223332221 11 133445556788999999999999999
Q ss_pred HHHHHhc-CCeEEEEeCCCCCCCCCccHHHHhcccc-----cc---------eeEEEEcCCCHHHHHHHHHHcCCCeEEE
Q 000572 615 VVKEIIY-PKGAEIDIRAIIVGDHTLSVLEIWGAEY-----QE---------QDAVLVKPESRDLLQSICERERVSMAVI 679 (1414)
Q Consensus 615 aL~Ela~-~~Ga~Idl~~iP~~~~~l~p~ei~~sEs-----qe---------r~ll~V~pe~~~~l~~i~~~~~~~~~vI 679 (1414)
.+..+.. ++|+.||.+.+-+++ .--|+... .| -|+++|+|++.+++.+-+++++-.+++|
T Consensus 690 NipRvlp~~l~~~id~~twe~p~-----vF~Wl~~aG~v~~~em~RTfN~GiGmVlvVs~e~ve~v~kel~~~~e~~~~i 764 (788)
T KOG0237|consen 690 NIPRVLPDHLGAVIDADTWELPP-----VFKWLQQAGNVPDSEMARTFNCGIGMVLVVSPENVERVLKELTNHGEEAYRI 764 (788)
T ss_pred cchhhcccccceEEecccccCcH-----HHHHHHHcCCCCHHHHHHHhccccceEEEEcHHHHHHHHHHHhhCCeEEEEE
Confidence 9999988 899999999887653 22343210 01 1899999999999999999999999999
Q ss_pred EEEEcC
Q 000572 680 GTISGE 685 (1414)
Q Consensus 680 G~vt~~ 685 (1414)
|+|.+.
T Consensus 765 G~vv~r 770 (788)
T KOG0237|consen 765 GEVVNR 770 (788)
T ss_pred EeEeec
Confidence 999864
|
|
| >TIGR01815 TrpE-clade3 anthranilate synthase, alpha proteobacterial clade | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.7e-11 Score=153.09 Aligned_cols=295 Identities=14% Similarity=0.092 Sum_probs=165.3
Q ss_pred chHHHhccccc-ceEEEEecCCHHHHHHHHHH--cCCCEEEEEEEeCCCc----EEEE----ECCEEEEe-----ccHHH
Q 000572 1025 SLFQTLFAEEL-GLVLEVSKSNLDTVSKKLHD--AGVSAEIIGQVNSSHS----VEIK----VDGLTHLN-----EKTSL 1088 (1414)
Q Consensus 1025 ~~~~~LFsE~~-G~vl~V~~~~~~~v~~~l~~--~gi~~~~IG~v~~~~~----l~i~----~~g~~i~~-----~~~~~ 1088 (1414)
+++..+..-.+ |.|--.|+..+-++++.++. .|.-+-.||-+..++. |.|+ .+|...+. ..-++
T Consensus 397 ~~~d~~~~~~p~gtvtGaPK~rAm~iI~elE~~~Rg~Y~GavG~~~~~G~~d~~I~IRt~~~~~~~~~~~aGaGIV~dS~ 476 (717)
T TIGR01815 397 DALDAFLSHSWAVTVTGAPKRWAMQFIEDTEQSPRRWYGGAFGRLGFNGGMNTGLTLRTIRMADGIAEVRAGATLLYDSD 476 (717)
T ss_pred CHHHHHhhcCCCCCCCCccHHHHHHHHHHhcCCCCcceEEEEEEEeCCCCEEEEEEEEEEEEECCEEEEEeeeEEECCCC
Confidence 44444434444 45666777777778887773 4777788998865432 2222 23322110 01122
Q ss_pred HHHHhhhccHHHHhhhccccchhhhhhcccccCCCceeeeeCCCcchhhccccCCCCEEEEEecCCCcCHHHHHHHHHHc
Q 000572 1089 LRDMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDEKYMNATSKPKVAVIREEGSNGDREMSAAFYAA 1168 (1414)
Q Consensus 1089 L~~~W~~~s~~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~kVaIl~~~G~n~~~~~~~Al~~a 1168 (1414)
-...|++|.-.+..+..-=..+.+ .+ +. .-.+ ....+...++|+||.. |..+.+.+.++|++.
T Consensus 477 P~~E~~Et~~K~~a~l~al~~a~~-----~~---~~---~~~~-----~~~~~~~~~~IlVID~-gds~~~~l~~~L~~~ 539 (717)
T TIGR01815 477 PDAEEAETRLKAAAFRDAIRRAKA-----AG---AA---PTLP-----AAPRGGEGRRILLVDH-EDSFVHTLANYLRQT 539 (717)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhc-----cC---Cc---cccc-----ccCCCCCCCEEEEEEC-CChhHHHHHHHHHHC
Confidence 334566665443333310000100 00 00 0001 0112345679999964 555578899999999
Q ss_pred CCceEEeecccccCcccCccCcCEEEEcCCC-CchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHH
Q 000572 1169 GFEPWDVTMSDLINGAISLDEFRGIVFVGGF-SYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMA 1247 (1414)
Q Consensus 1169 G~~~~~v~~~dl~~~~~~l~~~dglvlPGG~-s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~ 1247 (1414)
|+++.+++..... ...+..++|+|||.||. +..|. ...+.++++++ .++|+||||.|||+|+
T Consensus 540 G~~v~vv~~~~~~-~~~~~~~~DgLILsgGPGsp~d~---------------~~~~~I~~~~~-~~iPvLGICLG~QlLa 602 (717)
T TIGR01815 540 GASVTTLRHSHAE-AAFDERRPDLVVLSPGPGRPADF---------------DVAGTIDAALA-RGLPVFGVCLGLQGMV 602 (717)
T ss_pred CCeEEEEECCCCh-hhhhhcCCCEEEEcCCCCCchhc---------------ccHHHHHHHHH-CCCCEEEECHHHHHHh
Confidence 9999888643211 11123569999996554 43221 23456677774 7899999999999999
Q ss_pred hcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHH
Q 000572 1248 LLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRI 1327 (1414)
Q Consensus 1248 ~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l 1327 (1414)
+. ++ |.... ...|... .|..+++. ..+++|+++. ..+.++..|+++ + +... +
T Consensus 603 ~a--~G---G~V~~-----~~~p~~G---------~~~~V~~~-~~~~Lf~~lp-~~~~v~~~HS~~---~-~~~~---L 654 (717)
T TIGR01815 603 EA--FG---GALDV-----LPEPVHG---------KASRIRVL-GPDALFAGLP-ERLTVGRYHSLF---A-RRDR---L 654 (717)
T ss_pred hh--hC---CEEEE-----CCCCeeC---------cceEEEEC-CCChhhhcCC-CCCEEEEECCCC---c-cccc---C
Confidence 86 22 22100 1122222 23456653 3467889884 346777899843 2 1111 1
Q ss_pred hhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccccccCCCCCCCCCCCCCCCChhHHHHH
Q 000572 1328 LHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQ 1407 (1414)
Q Consensus 1328 ~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~ 1407 (1414)
..+...+.+.+ +| .++|+...+.+++|+|||||+.... ....+++||+
T Consensus 655 -P~~~~vlA~s~-------------d~---~v~Ai~~~~~~i~GVQFHPEsi~T~---------------sg~~G~~ilk 702 (717)
T TIGR01815 655 -PAELTVTAESA-------------DG---LIMAIEHRRLPLAAVQFHPESIMTL---------------DGGAGLAMIG 702 (717)
T ss_pred -CCCeEEEEEeC-------------CC---cEEEEEECCCCEEEEEeCCeeCCcc---------------CchhHHHHHH
Confidence 11223332211 13 3889988888999999999986331 0136999999
Q ss_pred HHHHhh
Q 000572 1408 NAREWC 1413 (1414)
Q Consensus 1408 na~~~~ 1413 (1414)
|++.++
T Consensus 703 Nfl~~~ 708 (717)
T TIGR01815 703 NVVDRL 708 (717)
T ss_pred HHHHHH
Confidence 999875
|
This model represents a small clade of anthranilate synthases from alpha proteobacteria and Nostoc (a cyanobacterium). This enzyme is the first step in the pathway for the biosynthesis of tryprophan from chorismate. |
| >PRK06774 para-aminobenzoate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.5e-11 Score=134.45 Aligned_cols=189 Identities=15% Similarity=0.107 Sum_probs=114.5
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|.++..+++.. +.+.+.|++.|.++.+++..........-.++|+|||.||... ..+.+. ....++
T Consensus 2 il~id~~dsf~-~nl~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~iilsgGP~~--~~~~~~-----------~~~~i~ 67 (191)
T PRK06774 2 LLLIDNYDSFT-YNLYQYFCELGTEVMVKRNDELQLTDIEQLAPSHLVISPGPCT--PNEAGI-----------SLAVIR 67 (191)
T ss_pred EEEEECCCchH-HHHHHHHHHCCCcEEEEeCCCCCHHHHHhcCCCeEEEcCCCCC--hHhCCC-----------chHHHH
Confidence 77887776663 4567788999999998874422111111125799999999843 222211 123334
Q ss_pred HHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEEE
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLG 1306 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~ 1306 (1414)
. ++ .++|+||||.|+|+|+.+ +. |+ +.++.. .+-.|..+.. ...+++|+++. ..+.
T Consensus 68 ~-~~-~~~PiLGIC~G~Qlla~~--~G---G~-------------v~~~~~--~~~G~~~~~~-~~~~~lf~~l~-~~~~ 123 (191)
T PRK06774 68 H-FA-DKLPILGVCLGHQALGQA--FG---AR-------------VVRARQ--VMHGKTSAIC-HSGQGVFRGLN-QPLT 123 (191)
T ss_pred H-hc-CCCCEEEECHHHHHHHHH--hC---CE-------------EEeCCc--ceecceEEEE-ecCchhhcCCC-CCcE
Confidence 3 43 689999999999999986 22 22 222211 1224445544 34567888884 3467
Q ss_pred EEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccccccCC
Q 000572 1307 VWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYP 1386 (1414)
Q Consensus 1307 ~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~~ 1386 (1414)
++..|++ .+. +.. + ..+...+.+++. .|....|.++.+++.+++|+|||||+...
T Consensus 124 v~~~Hs~---~v~-~~~---l-p~~~~vlA~s~~------------d~~~~~i~~~~~~~~~i~GvQfHPE~~~~----- 178 (191)
T PRK06774 124 VTRYHSL---VIA-ADS---L-PGCFELTAWSER------------GGEMDEIMGIRHRTLPLEGVQFHPESILS----- 178 (191)
T ss_pred EEEeCcc---eee-ccC---C-CCCeEEEEEeCC------------CCCcceEEEEEeCCCCEEEEEECCCcCCC-----
Confidence 8899984 331 111 1 112233333221 12334577888888899999999997533
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHH
Q 000572 1387 WYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1387 ~~p~~~~~~~~~~spw~~~F~na~~ 1411 (1414)
..+.+||+|+++
T Consensus 179 -------------~~G~~i~~nf~~ 190 (191)
T PRK06774 179 -------------EQGHQLLDNFLK 190 (191)
T ss_pred -------------ccHHHHHHHHhh
Confidence 158999999864
|
|
| >cd01749 GATase1_PB Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.5e-12 Score=139.47 Aligned_cols=180 Identities=19% Similarity=0.180 Sum_probs=109.8
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|+|+..+|.+++. .++|++.|++++.++. ..+++++|+||+|||.+. ..+ ....+..+.+.|+
T Consensus 1 igvl~~qg~~~e~--~~~l~~~g~~v~~v~~------~~~l~~~dgiii~Gg~~~--~~~-------~~~~~~~~~~~i~ 63 (183)
T cd01749 1 IGVLALQGDFREH--IRALERLGVEVIEVRT------PEDLEGIDGLIIPGGEST--TIG-------KLLRRTGLLDPLR 63 (183)
T ss_pred CEEEEecCCcHHH--HHHHHHCCCeEEEECC------HHHhccCCEEEECCchHH--HHH-------HHHHhCCHHHHHH
Confidence 5788899988655 4899999999999873 345889999999999852 111 1334456678899
Q ss_pred HHHhCCCCeEEEEehhhHHHHhcCccC-CCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEE
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALLGWIP-GPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTL 1305 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~lgllp-~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~ 1305 (1414)
++++ .++|+||||.|+|+|++.---+ ..++- ..-.-...+|..++-..+. ...+ .+.++.-+.+
T Consensus 64 ~~~~-~g~PvlGiC~G~qlL~~~~~~~~~~~gl-------G~~~~~v~~~~~g~~~g~~-~~~l------~~~~~~~~~~ 128 (183)
T cd01749 64 EFIR-AGKPVFGTCAGLILLAKEVEDQGGQPLL-------GLLDITVRRNAFGRQVDSF-EADL------DIPGLGLGPF 128 (183)
T ss_pred HHHH-cCCeEEEECHHHHHHHHHhcccCCCCcc-------CceeEEEEeeccccccceE-EEcC------CCCcCCCCcc
Confidence 9985 8999999999999999851111 00011 0111135666555443332 2222 1222211457
Q ss_pred EEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccccccC
Q 000572 1306 GVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQY 1385 (1414)
Q Consensus 1306 ~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~ 1385 (1414)
++++.|.+ .+.- -++. -++.+.. | ..+.++. .+|++|+|||||.+.....|
T Consensus 129 ~~~~~h~~-~v~~-~p~~-------~~~la~~-~-----------------~~~~a~~--~~~~~g~qfHPE~~~~~~~~ 179 (183)
T cd01749 129 PAVFIRAP-VIEE-VGPG-------VEVLAEY-D-----------------GKIVAVR--QGNVLATSFHPELTDDTRIH 179 (183)
T ss_pred EEEEEECc-EEEE-cCCC-------cEEEEec-C-----------------CEEEEEE--ECCEEEEEcCCccCCCcchh
Confidence 77888986 3221 1221 1223221 2 1234554 46999999999988776555
Q ss_pred CC
Q 000572 1386 PW 1387 (1414)
Q Consensus 1386 ~~ 1387 (1414)
+|
T Consensus 180 ~~ 181 (183)
T cd01749 180 EY 181 (183)
T ss_pred hh
Confidence 55
|
Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis. Glutamine amidotransferase (GATase) activity involves the removal of the ammonia group from a glutamate molecule and its subsequent transfer to a specific substrate, thus creating a new carbon-nitrogen group on the substrate. This group contains proteins like Bacillus subtilus YaaE and Plasmodium falciparum Pdx2 which are members of the triad glutamine aminotransferase family and function in a pathway for the biosynthesis of vitamin B6. |
| >PRK06278 cobyrinic acid a,c-diamide synthase; Validated | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.5e-12 Score=153.79 Aligned_cols=185 Identities=16% Similarity=0.197 Sum_probs=112.4
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCC-ceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGF-EPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~-~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~ 1223 (1414)
|||+||..+| ..+||+++|. ++.+++.+ ++..|.++|+||||||... ..+ .+ ...+.+
T Consensus 1 m~iGvlal~s------v~~al~~lg~~~~~vv~~~----~~~~l~~~D~lILPGG~~~----~~~------~l-~~~l~~ 59 (476)
T PRK06278 1 MEIGLLDIKG------SLPCFENFGNLPTKIIDEN----NIKEIKDLDGLIIPGGSLV----ESG------SL-TDELKK 59 (476)
T ss_pred CEEEEEehhh------HHHHHHHhcCCCcEEEEeC----ChHHhccCCEEEECCCchh----hcc------hH-HHHHHH
Confidence 5899998755 4577999987 67776644 4567899999999998521 100 11 234555
Q ss_pred HHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCC---CccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCC
Q 000572 1224 QFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVG---GVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGM 1300 (1414)
Q Consensus 1224 ~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~---~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~ 1300 (1414)
++++| |+|+||||.|||||.+... .+.++. ...++. -.| -+...++.++++..++... ++|..
T Consensus 60 ~i~~~----g~pvlGICgG~QmLg~~~~-eg~e~~~~~~~~GLG---ll~---~~~~~~K~~~~v~g~v~~~-~~~~~-- 125 (476)
T PRK06278 60 EILNF----DGYIIGICSGFQILSEKID-IGRKSPVPIIKEGLG---LLD---VEFSPLICTDRVEFKIEDD-SLFTK-- 125 (476)
T ss_pred HHHHc----CCeEEEEcHHHHhcccccc-cCcccccccccCccc---eee---eeecCceeEeEEEEEEEec-ccccC--
Confidence 66555 8999999999999998532 111100 000000 011 1234556778887777433 33322
Q ss_pred CCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccc
Q 000572 1301 EGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCF 1380 (1414)
Q Consensus 1301 ~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~ 1380 (1414)
.+..+.....|.|||.+.. ++. ..+....++..+|. ||++...++|++ +|||+|+|+|..--.
T Consensus 126 ~~~~v~GyEiH~~G~t~~~-~~~-~~l~~~~~~~~~~~-------------~~~~~~~~eG~~--~g~V~GTYlHGifdn 188 (476)
T PRK06278 126 KNERGTGFHCHTYGNIEIN-GDT-KILTYSKIQKLNYK-------------MVGEKEILSGVF--KGKVFGTMVHNFLDN 188 (476)
T ss_pred CCCEEEEEeeccCCEEEEC-CCc-cchhhcceeeeecc-------------CCCCcCCcCcee--cCCEEEEecCcccCC
Confidence 3566777899999997642 211 12222222344452 334445578998 899999999997654
Q ss_pred c
Q 000572 1381 L 1381 (1414)
Q Consensus 1381 ~ 1381 (1414)
.
T Consensus 189 ~ 189 (476)
T PRK06278 189 P 189 (476)
T ss_pred H
Confidence 3
|
|
| >PF00586 AIRS: AIR synthase related protein, N-terminal domain; InterPro: IPR000728 This family includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.1e-12 Score=127.15 Aligned_cols=93 Identities=24% Similarity=0.198 Sum_probs=75.4
Q ss_pred cCcEEEEEecCCCceEeEEEEccCCCCC---CCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHHH
Q 000572 791 LADVAVIAQTYTDLTGGACAIGEQPIKG---LLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAM 867 (1414)
Q Consensus 791 g~DaAVi~~~~~~~~gla~s~g~~p~~~---~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~l 867 (1414)
|+||||++++. ++.+++++|...... ..|||.+|++||++++|||++|||+|+. +.+++++ |+. .+.+++
T Consensus 1 GdDaavi~~~~--~~~~~~~~d~~~~~~~~~~~~p~~~g~~av~~~~sDl~a~Ga~P~~-~~~~l~~--~~~--~~~~~l 73 (96)
T PF00586_consen 1 GDDAAVIRIPD--GKRLVVSTDGFGTSVHFAFMDPYDGGWKAVAEALSDLAAMGAKPLA-ILDSLGL--PNP--ESPEEL 73 (96)
T ss_dssp TSSSEEEEETS--TEEEEEEEEEEETHHHHHTCTHHHHHHHHHHHHHHHHHTTTEEEEE-EEEEEEE--STT--SBHHHH
T ss_pred CCceEEEEcCC--CCeEEEEEEeccCcccccccCHHHHHHHHHHHHHHHHHhcCCeeeE-EEEEEEc--CCC--CCHHHH
Confidence 68999999984 367788887654432 6699999999999999999999999975 5555554 532 346778
Q ss_pred HHHHHHHHHHHHHhCCccccccc
Q 000572 868 YDAATALAEAMIELGIAIDGGKD 890 (1414)
Q Consensus 868 ~~~~~gl~eac~~lGv~ivGGk~ 890 (1414)
.++++|+.++|+++|++++||||
T Consensus 74 ~~~~~Gi~~~~~~~g~~ivGG~T 96 (96)
T PF00586_consen 74 KEIVKGIAEACREFGIPIVGGDT 96 (96)
T ss_dssp HHHHHHHHHHHHHHT-EEEEEEE
T ss_pred HHHHHHHHHHHHHhCCcEeCcCC
Confidence 99999999999999999999996
|
; GO: 0003824 catalytic activity; PDB: 3VIU_A 2Z1T_A 2Z1U_A 3C9U_B 3C9S_A 3C9R_A 1VQV_A 3C9T_B 3M84_A 3QTY_A .... |
| >PRK13566 anthranilate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=9.5e-11 Score=149.68 Aligned_cols=196 Identities=15% Similarity=0.123 Sum_probs=124.2
Q ss_pred cCCCCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcch
Q 000572 1141 ATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQP 1220 (1414)
Q Consensus 1141 ~~~~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~ 1220 (1414)
+.+.+||+||.+.. ..-+.+.+.|++.|+++..++...-. ......++|+|||.||....+. ..
T Consensus 523 ~~~g~~IlvID~~d-sf~~~l~~~Lr~~G~~v~vv~~~~~~-~~~~~~~~DgVVLsgGpgsp~d--------------~~ 586 (720)
T PRK13566 523 VGEGKRVLLVDHED-SFVHTLANYFRQTGAEVTTVRYGFAE-EMLDRVNPDLVVLSPGPGRPSD--------------FD 586 (720)
T ss_pred CCCCCEEEEEECCC-chHHHHHHHHHHCCCEEEEEECCCCh-hHhhhcCCCEEEECCCCCChhh--------------CC
Confidence 45668999997654 44667899999999999998754211 1112357899999666532211 12
Q ss_pred HHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCC
Q 000572 1221 LLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGM 1300 (1414)
Q Consensus 1221 l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~ 1300 (1414)
+.+.++..++ .++|+||||.|+|+|++. ++ |+ +.++..+ +.-.|..+++. .++++|+++
T Consensus 587 ~~~lI~~a~~-~~iPILGIClG~QlLa~a--lG---G~-------------V~~~~~~-~~G~~~~V~v~-~~~~Lf~~l 645 (720)
T PRK13566 587 CKATIDAALA-RNLPIFGVCLGLQAIVEA--FG---GE-------------LGQLAYP-MHGKPSRIRVR-GPGRLFSGL 645 (720)
T ss_pred cHHHHHHHHH-CCCcEEEEehhHHHHHHH--cC---CE-------------EEECCCC-ccCCceEEEEC-CCCchhhcC
Confidence 4566777774 789999999999999986 22 22 1111111 11124456663 346788888
Q ss_pred CCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccc
Q 000572 1301 EGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCF 1380 (1414)
Q Consensus 1301 ~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~ 1380 (1414)
. ..+.++..|++ ++... .+ ..+..++.+.+ .| .|.++...+++++|.|||||+..
T Consensus 646 p-~~~~v~~~Hs~---~v~~~----~L-p~~~~vlA~s~-------------dg---~V~ai~~~~~pi~GVQFHPE~i~ 700 (720)
T PRK13566 646 P-EEFTVGRYHSL---FADPE----TL-PDELLVTAETE-------------DG---VIMAIEHKTLPVAAVQFHPESIM 700 (720)
T ss_pred C-CCCEEEEecce---eEeec----cC-CCceEEEEEeC-------------CC---cEEEEEECCCCEEEEeccCeeCC
Confidence 4 34777788984 22111 11 12333443322 23 48999988899999999999753
Q ss_pred ccccCCCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1381 LMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1381 ~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
.. ....+++||+|++++|
T Consensus 701 t~---------------~~~~G~~ii~nfl~~~ 718 (720)
T PRK13566 701 TL---------------GGDVGLRIIENVVRLL 718 (720)
T ss_pred cC---------------CchhHHHHHHHHHHHh
Confidence 31 1236999999999887
|
|
| >cd01743 GATase1_Anthranilate_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.2e-11 Score=131.03 Aligned_cols=183 Identities=18% Similarity=0.120 Sum_probs=109.6
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|.|+.+++... ..+.+.|++.|.++..++...-.....++.++|+||+.||... ..+ ......+.
T Consensus 1 il~~~~~~~~~-~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~dgvil~gG~~~--~~~------------~~~~~~i~ 65 (184)
T cd01743 1 ILLIDNYDSFT-YNLVQYLRELGAEVVVVRNDEITLEELELLNPDAIVISPGPGH--PED------------AGISLEII 65 (184)
T ss_pred CEEEeCCCccH-HHHHHHHHHcCCceEEEeCCCCCHHHHhhcCCCEEEECCCCCC--ccc------------chhHHHHH
Confidence 46777766653 4468899999999999986432111124678999998666532 111 01233445
Q ss_pred HHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEEE
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLG 1306 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~ 1306 (1414)
+.+. .++|+||||.|||+|+.+ +. |+. .++... ..-.|..+.+ +.+++|+++. ..+.
T Consensus 66 ~~~~-~~~PvlGIC~G~Qlla~~--~G---g~v-------------~~~~~~-~~g~~~~v~~--~~~~~~~~~~-~~~~ 122 (184)
T cd01743 66 RALA-GKVPILGVCLGHQAIAEA--FG---GKV-------------VRAPEP-MHGKTSEIHH--DGSGLFKGLP-QPFT 122 (184)
T ss_pred HHHh-cCCCEEEECHhHHHHHHH--hC---CEE-------------EeCCCC-CcCceeEEEE--CCCccccCCC-CCcE
Confidence 5553 679999999999999985 22 221 111111 0112234444 3466788874 4567
Q ss_pred EEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccccccCC
Q 000572 1307 VWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYP 1386 (1414)
Q Consensus 1307 ~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~~ 1386 (1414)
++..|++ .+..... .. +...+.. ++++ .+.|+...+.+++|+|||||++...
T Consensus 123 ~~~~H~~---~v~~~~~-~~----~~~~la~-------------~~~~---~v~a~~~~~~~i~gvQfHPE~~~~~---- 174 (184)
T cd01743 123 VGRYHSL---VVDPDPL-PD----LLEVTAS-------------TEDG---VIMALRHRDLPIYGVQFHPESILTE---- 174 (184)
T ss_pred EEeCcEE---EEecCCC-Cc----eEEEEEe-------------CCCC---eEEEEEeCCCCEEEEeeCCCcCCCc----
Confidence 7788984 3321111 00 1122222 2233 4889988777899999999997652
Q ss_pred CCCCCCCCCCCCCChhHHHHHHH
Q 000572 1387 WYPKNWNVDKKGPSPWLKMFQNA 1409 (1414)
Q Consensus 1387 ~~p~~~~~~~~~~spw~~~F~na 1409 (1414)
.+++||+|+
T Consensus 175 --------------~g~~l~~~f 183 (184)
T cd01743 175 --------------YGLRLLENF 183 (184)
T ss_pred --------------chHHHHHhh
Confidence 378899986
|
Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase (ASase). This group contains proteins similar to para-aminobenzoate (PABA) synthase and ASase. These enzymes catalyze similar reactions and produce similar products, PABA and ortho-aminobenzoate (anthranilate). Each enzyme is composed of non-identical subunits: a glutamine amidotransferase subunit (component II) and a subunit that produces an aminobenzoate products (component I). ASase catalyses the synthesis of anthranilate from chorismate and glutamine and is a tetrameric protein comprising two copies each of components I and II. Component II of ASase belongs to the family of triad GTases which hydrolyze glutamine and transfer nascent ammonia between the active sites. In some bacteria, such as Escherichia coli, component II can be much larger than in other organisms, due to the prese |
| >CHL00101 trpG anthranilate synthase component 2 | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.6e-11 Score=130.41 Aligned_cols=187 Identities=14% Similarity=0.111 Sum_probs=113.2
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|.||.++.+.. +.+.+.|++.|.++.+++.......+....++|+||+.||..... + ..+...+.
T Consensus 2 iliid~~dsft-~~l~~~l~~~g~~~~v~~~~~~~~~~~~~~~~dgiiisgGpg~~~--~------------~~~~~~i~ 66 (190)
T CHL00101 2 ILIIDNYDSFT-YNLVQSLGELNSDVLVCRNDEIDLSKIKNLNIRHIIISPGPGHPR--D------------SGISLDVI 66 (190)
T ss_pred EEEEECCCchH-HHHHHHHHhcCCCEEEEECCCCCHHHHhhCCCCEEEECCCCCChH--H------------CcchHHHH
Confidence 77887766653 557889999999999887432211111224689999999985322 1 11223444
Q ss_pred HHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEEE
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLG 1306 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~ 1306 (1414)
+.++ .++|+||||.|+|+|+.+ ++ |++ .++..+. .-.|..+. ...+++++++. ..+.
T Consensus 67 ~~~~-~~~PiLGIClG~Qlla~~--~G---g~V-------------~~~~~~~-~g~~~~~~--~~~~~l~~~~~-~~~~ 123 (190)
T CHL00101 67 SSYA-PYIPILGVCLGHQSIGYL--FG---GKI-------------IKAPKPM-HGKTSKIY--HNHDDLFQGLP-NPFT 123 (190)
T ss_pred HHhc-CCCcEEEEchhHHHHHHH--hC---CEE-------------EECCCcc-cCceeeEe--eCCcHhhccCC-CceE
Confidence 5554 789999999999999984 32 221 1111110 11122222 23456788874 4577
Q ss_pred EEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCc-EEEEccCCccccccccC
Q 000572 1307 VWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGR-HLAMMPHPERCFLMWQY 1385 (1414)
Q Consensus 1307 ~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGr-vlg~m~HPEr~~~~~q~ 1385 (1414)
++..|++. +.... + ..+...+.+.+ +| .+.|+..++.+ ++|+|||||++...
T Consensus 124 v~~~H~~~---v~~~~----l-p~~~~vla~s~-------------~~---~v~a~~~~~~~~i~gvQfHPE~~~~~--- 176 (190)
T CHL00101 124 ATRYHSLI---IDPLN----L-PSPLEITAWTE-------------DG---LIMACRHKKYKMLRGIQFHPESLLTT--- 176 (190)
T ss_pred EEcchhhe---eeccc----C-CCceEEEEEcC-------------CC---cEEEEEeCCCCCEEEEEeCCccCCCh---
Confidence 88899853 31111 1 11223333322 23 48888887778 99999999986331
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1386 PWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1386 ~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
-+.+||+|+.++.
T Consensus 177 ---------------~g~~l~~nf~~~~ 189 (190)
T CHL00101 177 ---------------HGQQILRNFLSLS 189 (190)
T ss_pred ---------------hHHHHHHHHHhhh
Confidence 4788999998764
|
|
| >PRK06490 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.7e-11 Score=134.64 Aligned_cols=180 Identities=16% Similarity=0.134 Sum_probs=116.0
Q ss_pred CCCCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchH
Q 000572 1142 TSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPL 1221 (1414)
Q Consensus 1142 ~~~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l 1221 (1414)
..++||.||...+......+...|++.|.++.++....-...+.++++||++||.||... ..+. .-|. ..+
T Consensus 5 ~~~~~vlvi~h~~~~~~g~l~~~l~~~g~~~~v~~~~~~~~~p~~l~~~dgvii~Ggp~~--~~d~-~~wi------~~~ 75 (239)
T PRK06490 5 RDKRPVLIVLHQERSTPGRVGQLLQERGYPLDIRRPRLGDPLPDTLEDHAGAVIFGGPMS--ANDP-DDFI------RRE 75 (239)
T ss_pred CCCceEEEEecCCCCCChHHHHHHHHCCCceEEEeccCCCCCCCcccccCEEEEECCCCC--CCCC-chHH------HHH
Confidence 457899999999988888889999999999888754311112346889999999998742 2111 1132 125
Q ss_pred HHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCC
Q 000572 1222 LNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGME 1301 (1414)
Q Consensus 1222 ~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~ 1301 (1414)
.+.|+++++ .++|+||||.|+|+|+.. +. |+ +.+|..+.++-.|..+++.. ...++.++.
T Consensus 76 ~~~i~~~~~-~~~PvLGIC~G~Qlla~a--lG---G~-------------V~~~~~G~~e~G~~~i~~~~-~~~~~~~~~ 135 (239)
T PRK06490 76 IDWISVPLK-ENKPFLGICLGAQMLARH--LG---AR-------------VAPHPDGRVEIGYYPLRPTE-AGRALMHWP 135 (239)
T ss_pred HHHHHHHHH-CCCCEEEECHhHHHHHHH--cC---CE-------------eecCCCCCCccceEEeEECC-CcccccCCC
Confidence 667788875 789999999999999985 22 22 22333444466677777743 334455553
Q ss_pred CcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccc
Q 000572 1302 GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1302 g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~ 1381 (1414)
. .+...|++. +..+ + +.+.+.. ++.+ .+.++.- +++++|+|||||.+..
T Consensus 136 -~--~~~~~H~d~-~~lP--~--------~~~~LA~-------------s~~~---~~qa~~~-~~~v~g~QfHPE~~~~ 184 (239)
T PRK06490 136 -E--MVYHWHREG-FDLP--A--------GAELLAT-------------GDDF---PNQAFRY-GDNAWGLQFHPEVTRA 184 (239)
T ss_pred -C--EEEEECCcc-ccCC--C--------CCEEEEe-------------CCCC---CeEEEEe-CCCEEEEeeCccCCHH
Confidence 2 244568865 3332 2 2233322 1112 3566765 4589999999998843
|
|
| >PRK07765 para-aminobenzoate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.7e-11 Score=131.33 Aligned_cols=190 Identities=16% Similarity=0.124 Sum_probs=113.6
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccc--cCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDL--INGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl--~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~ 1222 (1414)
|||.|+.++.+. ...+...|++.|+++.+++...- ......++.+|+|||.||....+ +. ....
T Consensus 1 ~~ilv~d~~~~~-~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~dgliisGGp~~~~--~~-----------~~~~ 66 (214)
T PRK07765 1 MRILVVDNYDSF-VFNLVQYLGQLGVEAEVWRNDDPRLADEAAVAAQFDGVLLSPGPGTPE--RA-----------GASI 66 (214)
T ss_pred CeEEEEECCCcH-HHHHHHHHHHcCCcEEEEECCCcCHHHHHHhhcCCCEEEECCCCCChh--hc-----------chHH
Confidence 578888776533 33467789999999999875421 11112246799999999974221 11 1224
Q ss_pred HHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeE-EEEEccCCCccccCCC
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFS-SVTIEDSPAIMLKGME 1301 (1414)
Q Consensus 1223 ~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v-~v~i~~~~s~~l~g~~ 1301 (1414)
+.++++++ .++|+||||.|+|+|+.+ +. |+ +.++..+.+ .+. .+.+ +++.+|+++.
T Consensus 67 ~~i~~~~~-~~~PiLGIC~G~Qlla~a--~G---G~-------------v~~~~~~~~--g~~~~v~~--~~~~~~~~~~ 123 (214)
T PRK07765 67 DMVRACAA-AGTPLLGVCLGHQAIGVA--FG---AT-------------VDRAPELLH--GKTSSVHH--TGVGVLAGLP 123 (214)
T ss_pred HHHHHHHh-CCCCEEEEccCHHHHHHH--hC---CE-------------EeeCCCCcc--CceeEEEE--CCCccccCCC
Confidence 56677774 789999999999999985 11 11 111111100 111 2222 2233677773
Q ss_pred CcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccc
Q 000572 1302 GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1302 g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~ 1381 (1414)
..++++..|++ .+. +.. + .++...+.+. +.| .++|+-.++.+++|+|||||++..
T Consensus 124 -~~~~v~~~H~~---~v~-~~~---l-p~~~~vla~s-------------~~~---~vqa~~~~~~~i~gvQfHPE~~~t 178 (214)
T PRK07765 124 -DPFTATRYHSL---TIL-PET---L-PAELEVTART-------------DSG---VIMAVRHRELPIHGVQFHPESVLT 178 (214)
T ss_pred -CccEEEecchh---eEe-ccc---C-CCceEEEEEc-------------CCC---cEEEEEeCCCCEEEEeeCCCcccC
Confidence 46788889985 331 111 1 1132333332 113 388888877679999999998733
Q ss_pred cccCCCCCCCCCCCCCCCChhHHHHHHHHHhhC
Q 000572 1382 MWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS 1414 (1414)
Q Consensus 1382 ~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~~ 1414 (1414)
.++.+|++|...+|+
T Consensus 179 ------------------~~g~~~l~~f~~~~~ 193 (214)
T PRK07765 179 ------------------EGGHRMLANWLTVCG 193 (214)
T ss_pred ------------------cchHHHHHHHHHHhc
Confidence 157777887777763
|
|
| >PF00117 GATase: Glutamine amidotransferase class-I; InterPro: IPR017926 Glutamine amidotransferase (GATase) enzymes catalyse the removal of the ammonia group from glutamine and then transfer this group to a substrate to form a new carbon-nitrogen group [] | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.1e-11 Score=130.11 Aligned_cols=174 Identities=18% Similarity=0.251 Sum_probs=110.3
Q ss_pred ecCCCcCHHHHHHHHHHcCCceEEeecccccCcc-cCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHH
Q 000572 1151 REEGSNGDREMSAAFYAAGFEPWDVTMSDLINGA-ISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFY 1229 (1414)
Q Consensus 1151 ~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~-~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~ 1229 (1414)
.+.|...-+.+.++|++.|.++++++.+...... ..+.++|+|||+||....... ....+.++.+.
T Consensus 3 iD~~~~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~d~iii~Gg~~~~~d~-------------~~~~~~i~~~~ 69 (192)
T PF00117_consen 3 IDNGDSFTHSLVRALRELGIDVEVVRVDSDFEEPLEDLDDYDGIIISGGPGSPYDI-------------EGLIELIREAR 69 (192)
T ss_dssp EESSHTTHHHHHHHHHHTTEEEEEEETTGGHHHHHHHTTTSSEEEEECESSSTTSH-------------HHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHCCCeEEEEECCCchhhhhhhhcCCCEEEECCcCCccccc-------------ccccccccccc
Confidence 3567777888999999999999999866421111 047889999999998643321 23556677777
Q ss_pred hCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccC-CCccccCCCCcEEEEE
Q 000572 1230 KRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDS-PAIMLKGMEGSTLGVW 1308 (1414)
Q Consensus 1230 ~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~-~s~~l~g~~g~~~~~~ 1308 (1414)
. .++|+||||.|+|+|+.. +. +. +.++.. ......+..+..+ .++++.++. ..+.++
T Consensus 70 ~-~~~PilGIC~G~Q~la~~--~G---~~-------------v~~~~~--~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~ 127 (192)
T PF00117_consen 70 E-RKIPILGICLGHQILAHA--LG---GK-------------VVPSPE--KPHHGGNIPISETPEDPLFYGLP-ESFKAY 127 (192)
T ss_dssp H-TTSEEEEETHHHHHHHHH--TT---HE-------------EEEEES--EEEEEEEEEEEEEEEHGGGTTST-SEEEEE
T ss_pred c-cceEEEEEeehhhhhHHh--cC---Cc-------------cccccc--ccccccccccccccccccccccc-cccccc
Confidence 4 789999999999999985 11 11 111110 1111112222221 246777773 578888
Q ss_pred EeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccc
Q 000572 1309 AAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1309 ~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~ 1381 (1414)
..|+ +.+... .+...+...+.+.+ ++ ..+.++...+++++|+|||||.+..
T Consensus 128 ~~H~---~~v~~~----~~~p~~~~~la~s~-------------~~--~~~~~~~~~~~~i~g~QfHPE~~~~ 178 (192)
T PF00117_consen 128 QYHS---DAVNPD----DLLPEGFEVLASSS-------------DG--CPIQAIRHKDNPIYGVQFHPEFSSS 178 (192)
T ss_dssp EEEC---EEEEEG----HHHHTTEEEEEEET-------------TT--TEEEEEEECTTSEEEESSBTTSTTS
T ss_pred cccc---eeeecc----cccccccccccccc-------------cc--cccccccccccEEEEEecCCcCCCC
Confidence 9998 444321 22233545555532 12 1478888877789999999998766
|
The GATase domain exists either as a separate polypeptidic subunit or as part of a larger polypeptide fused in different ways to a synthase domain. Two classes of GATase domains have been identified [, ]: class-I (also known as trpG-type or triad) and class-II (also known as purF-type or Ntn). Class-I (or type 1) GATase domains have been found in the following enzymes: The second component of anthranilate synthase (AS) []. AS catalyzes the biosynthesis of anthranilate from chorismate and glutamine. AS is generally a dimeric enzyme: the first component can synthesize anthranilate using ammonia rather than glutamine, whereas component II provides the GATase activity []. In some bacteria and in fungi the GATase component of AS is part of a multifunctional protein that also catalyzes other steps of the biosynthesis of tryptophan. The second component of 4-amino-4-deoxychorismate (ADC) synthase, a dimeric prokaryotic enzyme that functions in the pathway that catalyzes the biosynthesis of para-aminobenzoate (PABA) from chorismate and glutamine. The second component (gene pabA) provides the GATase activity []. CTP synthase. CTP synthase catalyzes the final reaction in the biosynthesis of pyrimidine, the ATP-dependent formation of CTP from UTP and glutamine. CTP synthase is a single chain enzyme that contains two distinct domains; the GATase domain is in the C-terminal section []. GMP synthase (glutamine-hydrolyzing). GMP synthase catalyzes the ATP-dependent formation of GMP from xanthosine 5'-phosphate and glutamine. GMP synthase is a single chain enzyme that contains two distinct domains; the GATase domain is in the N-terminal section [, ]. Glutamine-dependent carbamoyl-phosphate synthase (GD-CPSase); an enzyme involved in both arginine and pyrimidine biosynthesis and which catalyzes the ATP-dependent formation of carbamoyl phosphate from glutamine and carbon dioxide. In bacteria GD-CPSase is composed of two subunits: the large chain (gene carB) provides the CPSase activity, while the small chain (gene carA) provides the GATase activity. In yeast the enzyme involved in arginine biosynthesis is also composed of two subunits: CPA1 (GATase), and CPA2 (CPSase). In most eukaryotes, the first three steps of pyrimidine biosynthesis are catalyzed by a large multifunctional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals). The GATase domain is located at the N-terminal extremity of this polyprotein []. Phosphoribosylformylglycinamidine synthase, an enzyme that catalyzes the fourth step in the de novo biosynthesis of purines. In some species of bacteria and rchaea, FGAM synthase II is composed of two subunits: a small chain (gene purQ) which provides the GATase activity and a large chain (gene purL) which provides the aminator activity. In eukaryotes and Gram-negative bacteria a single polypeptide (large type of purL) contains a FGAM synthethase domain and the GATase as the C-terminal domain []. Imidazole glycerol phosphate synthase subunit hisH, an enzyme that catalyzes the fifth step in the biosynthesis of histidine. A triad of conserved Cys-His-Glu forms the active site, wherein the catalytic cysteine is essential for the amidotransferase activity [, ]. Different structures show that the active site Cys of type 1 GATase is located at the tip of a nucleophile elbow.; PDB: 1I7S_D 1I7Q_D 3UOW_B 1GPM_C 1O1Y_A 2VXO_A 2VPI_B 1OX5_B 1OX6_B 1OX4_B .... |
| >PRK05670 anthranilate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=9e-11 Score=128.08 Aligned_cols=186 Identities=16% Similarity=0.137 Sum_probs=110.8
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccC-cccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLIN-GAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQF 1225 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~-~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i 1225 (1414)
|.||.+..+. -+.+.+.|++.|.++.+++...... ....+ ++|+||+.||... ..+.+ ...+.+
T Consensus 2 iliid~~d~f-~~~i~~~l~~~g~~~~v~~~~~~~~~~~~~~-~~dglIlsgGpg~--~~d~~-----------~~~~~l 66 (189)
T PRK05670 2 ILLIDNYDSF-TYNLVQYLGELGAEVVVYRNDEITLEEIEAL-NPDAIVLSPGPGT--PAEAG-----------ISLELI 66 (189)
T ss_pred EEEEECCCch-HHHHHHHHHHCCCcEEEEECCCCCHHHHHhC-CCCEEEEcCCCCC--hHHcc-----------hHHHHH
Confidence 7888665443 4567889999999999987542111 11122 3899999888732 22211 122344
Q ss_pred HHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeE-EEEEccCCCccccCCCCcE
Q 000572 1226 QEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFS-SVTIEDSPAIMLKGMEGST 1304 (1414)
Q Consensus 1226 ~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v-~v~i~~~~s~~l~g~~g~~ 1304 (1414)
++ +. .++|+||||.|+|+|+.+ +. |+. .++....+ .++ .++ ...+++++++.. .
T Consensus 67 ~~-~~-~~~PvLGIClG~Qlla~a--lG---g~v-------------~~~~~~~~--g~~~~v~--~~~~~l~~~~~~-~ 121 (189)
T PRK05670 67 RE-FA-GKVPILGVCLGHQAIGEA--FG---GKV-------------VRAKEIMH--GKTSPIE--HDGSGIFAGLPN-P 121 (189)
T ss_pred HH-hc-CCCCEEEECHHHHHHHHH--hC---CEE-------------EecCCccc--CceeEEE--eCCCchhccCCC-C
Confidence 44 33 679999999999999986 11 211 11110000 111 222 335668888843 4
Q ss_pred EEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccccccc
Q 000572 1305 LGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQ 1384 (1414)
Q Consensus 1305 ~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q 1384 (1414)
+.++..|+++ +...+ + ..+...+.+.+ +| .+.|+..++.+++|+|||||++..
T Consensus 122 ~~v~~~H~~~---v~~~~----l-p~~~~~la~s~-------------~~---~i~a~~~~~~~~~gvQfHPE~~~~--- 174 (189)
T PRK05670 122 FTVTRYHSLV---VDRES----L-PDCLEVTAWTD-------------DG---EIMGVRHKELPIYGVQFHPESILT--- 174 (189)
T ss_pred cEEEcchhhe---ecccc----C-CCceEEEEEeC-------------CC---cEEEEEECCCCEEEEeeCCCcCCC---
Confidence 6677888853 21100 1 11333333321 23 489998888899999999999632
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHhhC
Q 000572 1385 YPWYPKNWNVDKKGPSPWLKMFQNAREWCS 1414 (1414)
Q Consensus 1385 ~~~~p~~~~~~~~~~spw~~~F~na~~~~~ 1414 (1414)
..+.+||+|+.+++.
T Consensus 175 ---------------~~g~~i~~~F~~~~~ 189 (189)
T PRK05670 175 ---------------EHGHKLLENFLELAR 189 (189)
T ss_pred ---------------cchHHHHHHHHHhhC
Confidence 147899999998864
|
|
| >PLN02335 anthranilate synthase | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.5e-11 Score=132.10 Aligned_cols=195 Identities=15% Similarity=0.108 Sum_probs=115.5
Q ss_pred CCCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHH
Q 000572 1143 SKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~ 1222 (1414)
+.++|+||.++.+. -+.+.+.|++.|.++.+++..++...+.....+|+|||.||.......+ . ..
T Consensus 17 ~~~~ilviD~~dsf-t~~i~~~L~~~g~~~~v~~~~~~~~~~~~~~~~d~iVisgGPg~p~d~~--~-----------~~ 82 (222)
T PLN02335 17 QNGPIIVIDNYDSF-TYNLCQYMGELGCHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSG--I-----------SL 82 (222)
T ss_pred ccCcEEEEECCCCH-HHHHHHHHHHCCCcEEEEECCCCCHHHHHhcCCCEEEEcCCCCChhhcc--c-----------hH
Confidence 45689999765444 4557889999999999997432211111223589999999996433222 1 12
Q ss_pred HHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEcc-CCCccccCCC
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIED-SPAIMLKGME 1301 (1414)
Q Consensus 1223 ~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~-~~s~~l~g~~ 1301 (1414)
+.+++ + ..++|+||||+|+|+|+.+ +. |. +.++..+...-.|..++... ..+++|+++.
T Consensus 83 ~~~~~-~-~~~~PiLGIClG~QlLa~a--lG---g~-------------v~~~~~~~~~G~~~~v~~~~~~~~~Lf~~l~ 142 (222)
T PLN02335 83 QTVLE-L-GPLVPLFGVCMGLQCIGEA--FG---GK-------------IVRSPFGVMHGKSSPVHYDEKGEEGLFSGLP 142 (222)
T ss_pred HHHHH-h-CCCCCEEEecHHHHHHHHH--hC---CE-------------EEeCCCccccCceeeeEECCCCCChhhhCCC
Confidence 22333 2 3679999999999999974 22 21 11111111111233344433 3467888884
Q ss_pred CcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCc-EEEEccCCcccc
Q 000572 1302 GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGR-HLAMMPHPERCF 1380 (1414)
Q Consensus 1302 g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGr-vlg~m~HPEr~~ 1380 (1414)
..+.++..|+++ +. +. .+-..+...+.++ .+| .|.++..++.. ++|.|||||+..
T Consensus 143 -~~~~v~~~H~~~---v~-~~---~lp~~~~~v~a~~-------------~~~---~v~ai~~~~~~~i~GvQfHPE~~~ 198 (222)
T PLN02335 143 -NPFTAGRYHSLV---IE-KD---TFPSDELEVTAWT-------------EDG---LIMAARHRKYKHIQGVQFHPESII 198 (222)
T ss_pred -CCCEEEechhhe---Ee-cc---cCCCCceEEEEEc-------------CCC---CEEEEEecCCCCEEEEEeCCCCCC
Confidence 457778899853 21 11 1111112233222 234 38888876644 999999999863
Q ss_pred ccccCCCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1381 LMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1381 ~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
.. -+.+||+|++.-+
T Consensus 199 ~~------------------~g~~i~~nF~~~~ 213 (222)
T PLN02335 199 TT------------------EGKTIVRNFIKII 213 (222)
T ss_pred Ch------------------hHHHHHHHHHHHH
Confidence 31 3689999988654
|
|
| >TIGR00566 trpG_papA glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.5e-10 Score=126.15 Aligned_cols=184 Identities=17% Similarity=0.116 Sum_probs=112.5
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCcc--CcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLD--EFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~--~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~ 1224 (1414)
|.||..+.+. -+.+.+.|++.|+++.+++..+... ..+. ++|+|||.||.... .+.+ ...+.
T Consensus 2 il~id~~dsf-t~~~~~~l~~~g~~v~v~~~~~~~~--~~~~~~~~d~iilsgGpg~p--~~~~-----------~~~~~ 65 (188)
T TIGR00566 2 VLMIDNYDSF-TYNLVQYFCELGAEVVVKRNDSLTL--QEIEALLPLLIVISPGPCTP--NEAG-----------ISLEA 65 (188)
T ss_pred EEEEECCcCH-HHHHHHHHHHcCCceEEEECCCCCH--HHHHhcCCCEEEEcCCCCCh--hhcc-----------hhHHH
Confidence 7788776665 3456788999999998877432211 1222 47899999998322 1211 11445
Q ss_pred HHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcE
Q 000572 1225 FQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGST 1304 (1414)
Q Consensus 1225 i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~ 1304 (1414)
++++ + .++|+||||.|+|+|+.. +. |+ +.++....| -+|..++. +++.+++++.+ .
T Consensus 66 i~~~-~-~~~PvLGIC~G~Qll~~~--~G---G~-------------v~~~~~~~~-g~~~~v~~--~~~~~~~~l~~-~ 121 (188)
T TIGR00566 66 IRHF-A-GKLPILGVCLGHQAMGQA--FG---GD-------------VVRANTVMH-GKTSEIEH--NGAGIFRGLFN-P 121 (188)
T ss_pred HHHh-c-cCCCEEEECHHHHHHHHH--cC---CE-------------EeeCCCccc-cceEEEEE--CCCccccCCCC-C
Confidence 5555 3 689999999999999985 22 22 222221112 12445554 33456777754 4
Q ss_pred EEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccccccc
Q 000572 1305 LGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQ 1384 (1414)
Q Consensus 1305 ~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q 1384 (1414)
+.++..|++. +. +.. + .++...+.+.+ ++ ..|+|+..++-+++|+|||||+....
T Consensus 122 ~~v~~~H~~~---v~-~~~---l-~~~~~v~a~s~-------------~~--~~v~a~~~~~~~i~gvQfHPE~~~t~-- 176 (188)
T TIGR00566 122 LTATRYHSLV---VE-PET---L-PTCFPVTAWEE-------------EN--IEIMAIRHRDLPLEGVQFHPESILSE-- 176 (188)
T ss_pred cEEEEcccce---Ee-ccc---C-CCceEEEEEcC-------------CC--CEEEEEEeCCCCEEEEEeCCCccCCc--
Confidence 7888899842 21 111 1 11223343322 21 14899998887899999999986431
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHH
Q 000572 1385 YPWYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1385 ~~~~p~~~~~~~~~~spw~~~F~na~~ 1411 (1414)
-+.+||+|++.
T Consensus 177 ----------------~G~~il~nfl~ 187 (188)
T TIGR00566 177 ----------------QGHQLLANFLH 187 (188)
T ss_pred ----------------ccHHHHHHHHh
Confidence 48899999864
|
This model describes the glutamine amidotransferase domain or peptide of the tryptophan-biosynthetic pathway enzyme anthranilate synthase or of the folate biosynthetic pathway enzyme para-aminobenzoate synthase. In at least one case, a single polypeptide from Bacillus subtilis was shown to have both functions. This model covers a subset of the sequences described by the pfam model GATase. |
| >PRK08007 para-aminobenzoate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-10 Score=126.38 Aligned_cols=185 Identities=18% Similarity=0.142 Sum_probs=111.9
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|.||..+.+.. +.+.+.|++.|+++.+++..+.........++|+|||.||..... +.+ ...+.++
T Consensus 2 il~idn~Dsft-~nl~~~l~~~g~~v~v~~~~~~~~~~~~~~~~d~iils~GPg~p~--~~~-----------~~~~~~~ 67 (187)
T PRK08007 2 ILLIDNYDSFT-WNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPD--EAG-----------ISLDVIR 67 (187)
T ss_pred EEEEECCCccH-HHHHHHHHHCCCcEEEEeCCCCCHHHHHhcCCCEEEEcCCCCChH--HCC-----------ccHHHHH
Confidence 78888777763 446778899999999987543221111123589999999995433 211 1233444
Q ss_pred HHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEEE
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLG 1306 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~ 1306 (1414)
. +. .++|+||||.|+|+|+.+ +. |+ +.++..+.+ -.+..++. +.+.+|+++. ..+.
T Consensus 68 ~-~~-~~~PiLGIClG~Q~la~a--~G---g~-------------v~~~~~~~~-g~~~~v~~--~~~~l~~~~~-~~~~ 123 (187)
T PRK08007 68 H-YA-GRLPILGVCLGHQAMAQA--FG---GK-------------VVRAAKVMH-GKTSPITH--NGEGVFRGLA-NPLT 123 (187)
T ss_pred H-hc-CCCCEEEECHHHHHHHHH--cC---CE-------------EEeCCCccc-CCceEEEE--CCCCcccCCC-CCcE
Confidence 4 43 689999999999999985 11 11 111111101 01222332 2345778874 4578
Q ss_pred EEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccccccCC
Q 000572 1307 VWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYP 1386 (1414)
Q Consensus 1307 ~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~~ 1386 (1414)
++..|++ .+.... + ..+..++.+. ++| .|.|+..++.+++|.|||||+....
T Consensus 124 v~~~H~~---~v~~~~----l-p~~~~v~a~~-------------~~~---~i~a~~~~~~~i~GvQfHPE~~~t~---- 175 (187)
T PRK08007 124 VTRYHSL---VVEPDS----L-PACFEVTAWS-------------ETR---EIMGIRHRQWDLEGVQFHPESILSE---- 175 (187)
T ss_pred EEEcchh---EEccCC----C-CCCeEEEEEe-------------CCC---cEEEEEeCCCCEEEEEeCCcccCCc----
Confidence 8899984 332111 1 1132333332 224 3888888888899999999986541
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHH
Q 000572 1387 WYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1387 ~~p~~~~~~~~~~spw~~~F~na~~ 1411 (1414)
.+++||+|+.+
T Consensus 176 --------------~G~~il~nFl~ 186 (187)
T PRK08007 176 --------------QGHQLLANFLH 186 (187)
T ss_pred --------------chHHHHHHHhh
Confidence 47899999864
|
|
| >PRK07649 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II; Validated | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.6e-10 Score=124.82 Aligned_cols=185 Identities=15% Similarity=0.076 Sum_probs=112.2
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|.|+..+.+. -+.+..-|++.|.++.+++..+.........++|+|||.||........ .....++
T Consensus 2 il~idn~dsf-t~nl~~~l~~~g~~v~v~~~~~~~~~~~~~~~~d~iIlsgGP~~p~~~~-------------~~~~~i~ 67 (195)
T PRK07649 2 ILMIDNYDSF-TFNLVQFLGELGQELVVKRNDEVTISDIENMKPDFLMISPGPCSPNEAG-------------ISMEVIR 67 (195)
T ss_pred EEEEeCCCcc-HHHHHHHHHHCCCcEEEEeCCCCCHHHHhhCCCCEEEECCCCCChHhCC-------------CchHHHH
Confidence 7788776665 3456788999999999988543221111223689999999985433221 1233444
Q ss_pred HHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEEE
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLG 1306 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~ 1306 (1414)
.+ + .++|+||||.|+|+|+.. ++ |+ +.++....| -.|..+. .+.+++|+++. ..+.
T Consensus 68 ~~-~-~~~PvLGIClG~Qlla~~--lG---g~-------------V~~~~~~~~-G~~~~i~--~~~~~lf~~~~-~~~~ 123 (195)
T PRK07649 68 YF-A-GKIPIFGVCLGHQSIAQV--FG---GE-------------VVRAERLMH-GKTSLMH--HDGKTIFSDIP-NPFT 123 (195)
T ss_pred Hh-c-CCCCEEEEcHHHHHHHHH--cC---CE-------------EeeCCCccc-CCeEEEE--ECCChhhcCCC-CCCE
Confidence 44 2 689999999999999984 22 22 111111111 1122233 23467899884 3577
Q ss_pred EEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccccccCC
Q 000572 1307 VWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYP 1386 (1414)
Q Consensus 1307 ~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~~ 1386 (1414)
++..|++.- .... + ..+...+.+++ +| .++|+-..+.+++|+|||||.+..
T Consensus 124 v~~~H~~~v---~~~~----l-p~~~~~~a~s~-------------~~---~v~a~~~~~~~i~gvQFHPE~~~t----- 174 (195)
T PRK07649 124 ATRYHSLIV---KKET----L-PDCLEVTSWTE-------------EG---EIMAIRHKTLPIEGVQFHPESIMT----- 174 (195)
T ss_pred EEEechheE---eccc----C-CCCeEEEEEcC-------------CC---cEEEEEECCCCEEEEEECCCCCCC-----
Confidence 888998532 1011 1 11223333322 23 389999888889999999996633
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHH
Q 000572 1387 WYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1387 ~~p~~~~~~~~~~spw~~~F~na~~ 1411 (1414)
..+.+||+|+.+
T Consensus 175 -------------~~g~~il~nfl~ 186 (195)
T PRK07649 175 -------------SHGKELLQNFIR 186 (195)
T ss_pred -------------ccHHHHHHHHHH
Confidence 147788888875
|
|
| >cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.7e-10 Score=125.74 Aligned_cols=175 Identities=21% Similarity=0.296 Sum_probs=107.7
Q ss_pred EEEEEecCCCcCHHHHHHHHHHcC---CceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHH
Q 000572 1146 KVAVIREEGSNGDREMSAAFYAAG---FEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1146 kVaIl~~~G~n~~~~~~~Al~~aG---~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~ 1222 (1414)
||+||...-......+.+.++.+| .++..+...+-. ...+++++|+|||+||.+..+. . ...|. ..+.
T Consensus 1 ~i~il~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~~~~dgvil~Gg~~~~~~-~-~~~~~------~~~~ 71 (188)
T cd01741 1 RILILQHDTPEGPGLFEDLLREAGAETIEIDVVDVYAGE-LLPDLDDYDGLVILGGPMSVDE-D-DYPWL------KKLK 71 (188)
T ss_pred CEEEEECCCCCCcchHHHHHHhcCCCCceEEEEecCCCC-CCCCcccCCEEEECCCCccCCc-c-CChHH------HHHH
Confidence 466664332222345567788888 566666543311 1246889999999999864311 1 11121 3467
Q ss_pred HHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEcc--CCCccccCC
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIED--SPAIMLKGM 1300 (1414)
Q Consensus 1223 ~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~--~~s~~l~g~ 1300 (1414)
+.++.+++ .++|+||||.|+|+|+.. ++ |+ +.+|..+ ++..|..+.+.. ..+++++++
T Consensus 72 ~~i~~~~~-~~~pilgiC~G~q~l~~~--lG---G~-------------v~~~~~~-~~~g~~~v~~~~~~~~~~l~~~~ 131 (188)
T cd01741 72 ELIRQALA-AGKPVLGICLGHQLLARA--LG---GK-------------VGRNPKG-WEIGWFPVTLTEAGKADPLFAGL 131 (188)
T ss_pred HHHHHHHH-CCCCEEEECccHHHHHHH--hC---CE-------------EecCCCc-ceeEEEEEEeccccccCchhhcC
Confidence 78888885 789999999999999975 22 22 3344333 455677777753 235567766
Q ss_pred CCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCc
Q 000572 1301 EGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPE 1377 (1414)
Q Consensus 1301 ~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPE 1377 (1414)
. ..+.++..|++.- . .+ ..+...+.+. +.+ .|.++..+ ++++|.|||||
T Consensus 132 ~-~~~~v~~~H~~~v---~------~l-p~~~~~la~~-------------~~~---~v~~~~~~-~~~~g~QfHPE 180 (188)
T cd01741 132 P-DEFPVFHWHGDTV---V------EL-PPGAVLLASS-------------EAC---PNQAFRYG-DRALGLQFHPE 180 (188)
T ss_pred C-CcceEEEEeccCh---h------hC-CCCCEEeecC-------------CCC---CcceEEec-CCEEEEccCch
Confidence 3 4577888998532 1 11 1122333321 222 47888875 89999999999
|
This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine |
| >PRK05637 anthranilate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.5e-10 Score=124.09 Aligned_cols=188 Identities=16% Similarity=0.154 Sum_probs=107.5
Q ss_pred EEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHH
Q 000572 1146 KVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQF 1225 (1414)
Q Consensus 1146 kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i 1225 (1414)
||+||..+ ...-+.+.+.|++.|+.+++++.+. .........+|+|||.||........ ...+.+
T Consensus 3 ~il~iD~~-dsf~~nl~~~l~~~g~~~~v~~~~~-~~~~l~~~~~~~iIlsgGPg~~~d~~-------------~~~~li 67 (208)
T PRK05637 3 HVVLIDNH-DSFVYNLVDAFAVAGYKCTVFRNTV-PVEEILAANPDLICLSPGPGHPRDAG-------------NMMALI 67 (208)
T ss_pred EEEEEECC-cCHHHHHHHHHHHCCCcEEEEeCCC-CHHHHHhcCCCEEEEeCCCCCHHHhh-------------HHHHHH
Confidence 68888654 4446778999999999999887431 10111123679999988874322111 012334
Q ss_pred HHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEcc--CCCccccCCC--
Q 000572 1226 QEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIED--SPAIMLKGME-- 1301 (1414)
Q Consensus 1226 ~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~--~~s~~l~g~~-- 1301 (1414)
+.+. .++|+||||.|+|+|+.. +. |.+ .+. +...-.+..+.+.. ..++++.++.
T Consensus 68 ~~~~--~~~PiLGIClG~Qlla~a--lG---G~V-------------~~~--~~~~G~~~~i~~~~~~~~~~l~~~~~~~ 125 (208)
T PRK05637 68 DRTL--GQIPLLGICLGFQALLEH--HG---GKV-------------EPC--GPVHGTTDNMILTDAGVQSPVFAGLATD 125 (208)
T ss_pred HHHh--CCCCEEEEcHHHHHHHHH--cC---Cee-------------ccC--CcccceEEEeEECCCCCCCcccCCCCcc
Confidence 4443 479999999999999985 22 211 000 00000111222211 1345565542
Q ss_pred ---------CcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEE
Q 000572 1302 ---------GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAM 1372 (1414)
Q Consensus 1302 ---------g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~ 1372 (1414)
|..+.+|..|++.-... + .+..++.+.+ +.++- -+.++...+.+++|.
T Consensus 126 ~~~~~~~~~g~~~~V~~~H~~~v~~l--p--------~~~~vlA~s~-----------~~~~~--v~~a~~~~~~~~~Gv 182 (208)
T PRK05637 126 VEPDHPEIPGRKVPIARYHSLGCVVA--P--------DGMESLGTCS-----------SEIGP--VIMAAETTDGKAIGL 182 (208)
T ss_pred cccccccccCCceEEEEechhhhhcC--C--------CCeEEEEEec-----------CCCCC--EEEEEEECCCCEEEE
Confidence 34588999998533211 1 1233343332 11111 256667778899999
Q ss_pred ccCCccccccccCCCCCCCCCCCCCCCChhHHHHHHHHH
Q 000572 1373 MPHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1373 m~HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~ 1411 (1414)
||||| +.++ .-|.+||+|++.
T Consensus 183 QfHPE-~~~T-----------------~~G~~il~nfl~ 203 (208)
T PRK05637 183 QFHPE-SVLS-----------------PTGPIILSRCVE 203 (208)
T ss_pred EeCCc-cCcC-----------------CCHHHHHHHHHH
Confidence 99999 3331 148999999875
|
|
| >COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.1e-10 Score=127.47 Aligned_cols=177 Identities=18% Similarity=0.200 Sum_probs=108.8
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcC-CceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAG-FEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG-~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~ 1223 (1414)
.+|+|+.+.+.... -+.+.+++.| ...+++. .+.........+.|+|||+||.+. +..... |+ +...+
T Consensus 2 ~~ilIld~g~q~~~-li~r~~re~g~v~~e~~~-~~~~~~~~~~~~~~giIlsGgp~s--v~~~~~-w~------~~~~~ 70 (198)
T COG0518 2 RKILILDFGGQYLG-LIARRLRELGYVYSEIVP-YTGDAEELPLDSPDGIIISGGPMS--VYDEDP-WL------PREKD 70 (198)
T ss_pred cEEEEEeCCCcHhH-HHHHHHHHcCCceEEEEe-CCCCcccccccCCCEEEEcCCCCC--Cccccc-cc------hhHHH
Confidence 47889987665544 4588999999 4444443 332223334456699999999942 111111 22 34556
Q ss_pred HHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCc
Q 000572 1224 QFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGS 1303 (1414)
Q Consensus 1224 ~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~ 1303 (1414)
.|.+.. ..++|+||||.|+|+|+.. +. |. +.+|.. .|-.|..+++...++++++++...
T Consensus 71 ~i~~~~-~p~~pvLGIC~G~Ql~A~~--lG---g~-------------V~~~~~--~E~G~~~v~~~~~~~~l~~gl~~~ 129 (198)
T COG0518 71 LIKDAG-VPGKPVLGICLGHQLLAKA--LG---GK-------------VERGPK--REIGWTPVELTEGDDPLFAGLPDL 129 (198)
T ss_pred HHHHhC-CCCCCEEEEChhHHHHHHH--hC---CE-------------EeccCC--CccceEEEEEecCccccccCCccc
Confidence 677776 3788899999999999974 32 22 222222 455788999864455889997532
Q ss_pred EEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccc
Q 000572 1304 TLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCF 1380 (1414)
Q Consensus 1304 ~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~ 1380 (1414)
..++|-+|++--... |+ |-+.+.-.+ . ..++++... .+++|+|||||-.-
T Consensus 130 ~~~v~~sH~D~v~~l--P~--------g~~vlA~s~-------~---------cp~qa~~~~-~~~~gvQFHpEv~~ 179 (198)
T COG0518 130 FTTVFMSHGDTVVEL--PE--------GAVVLASSE-------T---------CPNQAFRYG-KRAYGVQFHPEVTH 179 (198)
T ss_pred cCccccchhCccccC--CC--------CCEEEecCC-------C---------ChhhheecC-CcEEEEeeeeEEeH
Confidence 227999999643212 21 212221111 1 235677664 69999999999554
|
|
| >PRK08857 para-aminobenzoate synthase component II; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.9e-10 Score=122.09 Aligned_cols=190 Identities=17% Similarity=0.107 Sum_probs=111.6
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|++|..+++.. +....-|++.|+.+.+++..+....+..-.++|+||+.||... ..+.+ ...+.++
T Consensus 2 il~id~~dsft-~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~iilsgGp~~--~~~~~-----------~~~~~i~ 67 (193)
T PRK08857 2 LLMIDNYDSFT-YNLYQYFCELGAQVKVVRNDEIDIDGIEALNPTHLVISPGPCT--PNEAG-----------ISLQAIE 67 (193)
T ss_pred EEEEECCCCcH-HHHHHHHHHCCCcEEEEECCCCCHHHHhhCCCCEEEEeCCCCC--hHHCc-----------chHHHHH
Confidence 77887777663 4467788999999999975422111101124789999998842 22211 1123444
Q ss_pred HHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEEE
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLG 1306 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~ 1306 (1414)
. ++ .++|+||||.|+|+|+.. +. ++ +.++....+ .|.. .+..+.+.+|+++. ..+.
T Consensus 68 ~-~~-~~~PiLGIClG~Qlia~a--~G---g~-------------v~~~~~~~~--G~~~-~~~~~~~~l~~~~~-~~~~ 123 (193)
T PRK08857 68 H-FA-GKLPILGVCLGHQAIAQV--FG---GQ-------------VVRARQVMH--GKTS-PIRHTGRSVFKGLN-NPLT 123 (193)
T ss_pred H-hc-CCCCEEEEcHHHHHHHHH--hC---CE-------------EEeCCCcee--CceE-EEEECCCcccccCC-CccE
Confidence 4 43 789999999999999985 21 11 111111111 1211 12123456888883 4578
Q ss_pred EEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccccccCC
Q 000572 1307 VWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYP 1386 (1414)
Q Consensus 1307 ~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~~ 1386 (1414)
++..|+++ +.... | ..+...+.+.+. -+|....|+|+..++-+++|.|||||++...
T Consensus 124 v~~~H~~~---v~~~~----l-p~~~~v~a~s~~-----------~~~~~~~i~~~~~~~~pi~gvQfHPE~~~t~---- 180 (193)
T PRK08857 124 VTRYHSLV---VKNDT----L-PECFELTAWTEL-----------EDGSMDEIMGFQHKTLPIEAVQFHPESIKTE---- 180 (193)
T ss_pred EEEccEEE---EEcCC----C-CCCeEEEEEecC-----------cCCCcceEEEEEeCCCCEEEEeeCCCcCCCc----
Confidence 88889853 21011 1 113233333320 0133346999998888999999999988431
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHH
Q 000572 1387 WYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1387 ~~p~~~~~~~~~~spw~~~F~na~~ 1411 (1414)
.+.+||+|+.+
T Consensus 181 --------------~g~~i~~nFl~ 191 (193)
T PRK08857 181 --------------QGHQLLANFLA 191 (193)
T ss_pred --------------chHHHHHHHHh
Confidence 38899999865
|
|
| >KOG3939 consensus Selenophosphate synthetase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.2e-10 Score=119.48 Aligned_cols=254 Identities=19% Similarity=0.230 Sum_probs=154.5
Q ss_pred cEEEEEecCCCceEeEEEEccCCCCCCCCHHHHHHHHHHHHhhchhccCcccccccccccccccccCCCC--cHHHHHHH
Q 000572 793 DVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDG--EGAAMYDA 870 (1414)
Q Consensus 793 DaAVi~~~~~~~~gla~s~g~~p~~~~~dP~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~--e~~~l~~~ 870 (1414)
|++||++.++ +..++-++|+.-++.+ |||.+||.|.+..+||++|||..--..+...+.. ..+..+ ++-..--+
T Consensus 2 d~~viplrh~-gl~lvqttdffyp~vd-dpy~mgriacanvlsdlyamgvtecdnmlmll~v--s~~~~ekerd~v~pl~ 77 (312)
T KOG3939|consen 2 DCCVIPLRHG-GLLLVQTTDFFYPLVD-DPYMMGRIACANVLSDLYAMGVTECDNMLMLLSV--STSMSEKERDVVIPLI 77 (312)
T ss_pred CceEEeeccC-CeEEEEeeceeeeccC-ChHHhhHHHHHHHHHHHHHhcccccccchhhhhh--hhhhhhhhhchhhHHH
Confidence 8999999865 5678899998766655 9999999999999999999999853222211111 111111 11122237
Q ss_pred HHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEE-EEcCCCCcccCCCccCCCCcEEEEEEcCCCccccc
Q 000572 871 ATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVY-VTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLG 949 (1414)
Q Consensus 871 ~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~-G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~LG 949 (1414)
++|..+++++.|+++.||.+-. .| ..++..+ -.|...++.+-|+-+.||| .|++ +..+|
T Consensus 78 ~~gfkdaa~e~gt~v~ggqtv~------------np-w~~igGVatsVcq~ne~i~pdnAvpGd-vlvL------Tkplg 137 (312)
T KOG3939|consen 78 IQGFKDAAEEAGTPVTGGQTVI------------NP-WCIIGGVATSVCQPNEIIMPDNAVPGD-VLVL------TKPLG 137 (312)
T ss_pred HHHhHHHHHhcCCceecCeeec------------Cc-ceeeccccccccCccceecccCCCCcc-eEEE------eccCC
Confidence 9999999999999999998632 13 3333322 2344456778889899997 3433 23466
Q ss_pred hHH---HHHHhh-hcC--CCC-CCCCChHHHHHHHHH----HHH-------HHhccCceEEEeCCCCchHHHHHHHHhcC
Q 000572 950 GSA---LAQVFD-QVG--NES-PDLEDVPYLKRVFET----VQD-------LIGDELVSTGHDISDGGLLVCTLEMSFAG 1011 (1414)
Q Consensus 950 GS~---la~~~~-~~~--~~~-p~v~d~~~lk~~~~~----v~~-------l~~~g~v~A~hDiSdGGL~~aL~EMa~as 1011 (1414)
+-. +.+... +.+ ... -.+.+ +..+..|+. +.. |+..-.++|+.||+..||+++.-.+|.--
T Consensus 138 ~qvAv~~h~wi~~~~ek~~~~~l~vs~-~die~ay~~a~~~M~~Lnr~aA~lmhkynaHaaTDItGFgllGHaqnLa~qq 216 (312)
T KOG3939|consen 138 GQVAVNAHQWIDNQPEKWNKLKLEVSD-EDIEKAYEEAMKSMARLNRNAAGLMHKYNAHAATDITGFGLLGHAQNLAKQQ 216 (312)
T ss_pred ceeehHHHHHHhcCcceeeeeeeeecH-HHHHHHHHHHHhhhhhhchhhhhhhhhccccccccccccchhhhHHHHHHHh
Confidence 543 233322 111 000 11111 223333331 111 22333589999999999999998888755
Q ss_pred CeEEEEEeCCCCC----chHHH----hc-------cccc-ceEEEEecCCHHHHHHHHHHc--C-CCEEEEEEEeCCCc
Q 000572 1012 NYGITLDLNSEGN----SLFQT----LF-------AEEL-GLVLEVSKSNLDTVSKKLHDA--G-VSAEIIGQVNSSHS 1071 (1414)
Q Consensus 1012 ~~G~~Idl~~~~~----~~~~~----LF-------sE~~-G~vl~V~~~~~~~v~~~l~~~--g-i~~~~IG~v~~~~~ 1071 (1414)
.-++..-+.+.|. ..... .| .|+. |+++..|.++++++.+.+++. | -.+..||.|+.+..
T Consensus 217 k~~v~f~i~~LPiI~km~~vska~G~~f~l~qGts~ETsGGlLIclP~eqaakfcaei~s~k~gegqAWIIGiVekgn~ 295 (312)
T KOG3939|consen 217 KNEVSFQIHKLPIIAKMAEVSKACGNMFKLRQGTSAETSGGLLICLPREQAAKFCAEIKSPKNGEGQAWIIGIVEKGNS 295 (312)
T ss_pred hccceeeeccChhhhhHHHHHHhccccceeccCCCccCCCceEEEccHHHHHHHHHHhcCCccCCCceEEEEEEecCCc
Confidence 4444444433320 11111 12 2444 478899999999888777643 1 15889999987643
|
|
| >PRK06186 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.8e-09 Score=119.39 Aligned_cols=197 Identities=15% Similarity=0.178 Sum_probs=108.8
Q ss_pred CEEEEEecCCCc--CHHHHHHHHHHcC----CceEEeec--ccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHh
Q 000572 1145 PKVAVIREEGSN--GDREMSAAFYAAG----FEPWDVTM--SDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIR 1216 (1414)
Q Consensus 1145 ~kVaIl~~~G~n--~~~~~~~Al~~aG----~~~~~v~~--~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l 1216 (1414)
.+||++=-|=.- .-.++..||+.+| ..+.+..+ +++.. ...|+++|||++||||.+-..
T Consensus 2 v~IalVGKY~~~~daY~Sv~eal~ha~~~~~~~~~i~wi~s~~l~~-~~~l~~~dgilvpgGfg~rg~------------ 68 (229)
T PRK06186 2 LRIALVGDYNPDVTAHQAIPLALDLAAAVLGLPVDYEWLPTPEITD-PEDLAGFDGIWCVPGSPYRND------------ 68 (229)
T ss_pred cEEEEEECCcCCcHHHHHHHHHHHHHHHhcCCeeEEEEEchhhcCC-hhhHhhCCeeEeCCCCCcccH------------
Confidence 478877443111 1125677888764 44444443 33432 246899999999999853111
Q ss_pred hcchHHHHHHHHHhCCCCeEEEEehhhHHHH-h--cCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCC
Q 000572 1217 FNQPLLNQFQEFYKRPDTFSLGVCNGCQLMA-L--LGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSP 1293 (1414)
Q Consensus 1217 ~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~-~--lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~ 1293 (1414)
++...+++... +.++|+||||+|||+++ + .+++...+..-. ++......|.+..-. .......-.+.+. ..
T Consensus 69 --~Gki~ai~~Ar-e~~iP~LGIClGmQ~avIe~arnv~g~~dA~s~-E~~~~~~~pvi~~~~-~~~~~~~h~v~l~-~~ 142 (229)
T PRK06186 69 --DGALTAIRFAR-ENGIPFLGTCGGFQHALLEYARNVLGWADAAHA-ETDPEGDRPVIAPLS-CSLVEKTGDIRLR-PG 142 (229)
T ss_pred --hHHHHHHHHHH-HcCCCeEeechhhHHHHHHHHhhhcCCcCCCcC-CCCCCCCCCEEEECc-cccccCceEEEEC-CC
Confidence 23445566555 58999999999999744 3 245443221111 122333345432211 0111112355553 34
Q ss_pred CccccCCCC-cEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCc-EEE
Q 000572 1294 AIMLKGMEG-STLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGR-HLA 1371 (1414)
Q Consensus 1294 s~~l~g~~g-~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGr-vlg 1371 (1414)
|.+ ..+-| ..+. ..|-+ ||.+ ++...+.+...|..+.-+ +|+|. |++|-.++.. ++|
T Consensus 143 S~l-~~iyg~~~i~--erhrH-ryeV-Ns~h~q~i~~~GL~vsa~-------------s~DG~---iEaiE~~~hpf~lG 201 (229)
T PRK06186 143 SLI-ARAYGTLEIE--EGYHC-RYGV-NPEFVAALESGDLRVTGW-------------DEDGD---VRAVELPGHPFFVA 201 (229)
T ss_pred CHH-HHHhCCCeee--eeccc-cEEE-CHHHHHHHhcCCeEEEEE-------------cCCCC---EEEEEeCCCCcEEE
Confidence 543 33423 2332 33432 3566 455667777777665443 45673 8888877654 899
Q ss_pred EccCCccccc
Q 000572 1372 MMPHPERCFL 1381 (1414)
Q Consensus 1372 ~m~HPEr~~~ 1381 (1414)
.|+|||...+
T Consensus 202 VQwHPE~~s~ 211 (229)
T PRK06186 202 TLFQPERAAL 211 (229)
T ss_pred EeCCCCccCC
Confidence 9999996644
|
|
| >cd01745 GATase1_2 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.8e-10 Score=125.60 Aligned_cols=87 Identities=20% Similarity=0.146 Sum_probs=59.6
Q ss_pred HHHHHHHHHcCCceEEeeccccc-CcccCccCcCEEEEcCCCCchhhhh-------cccchhHHHhhcchHHHHHHHHHh
Q 000572 1159 REMSAAFYAAGFEPWDVTMSDLI-NGAISLDEFRGIVFVGGFSYADVLD-------SAKGWSASIRFNQPLLNQFQEFYK 1230 (1414)
Q Consensus 1159 ~~~~~Al~~aG~~~~~v~~~dl~-~~~~~l~~~dglvlPGG~s~gD~l~-------~g~~~a~~~l~~~~l~~~i~~f~~ 1230 (1414)
.++.++|+++|+.++++...+.. .....++.+|+||||||+++.+..- .+..+..+ +....+.++++++
T Consensus 22 ~~~~~~l~~~G~~~~iv~~~~~~~~~~~~l~~~dglvl~GG~~~~~~~~~~~~~~~~~~~~~~r---~~~~~~~~~~~~~ 98 (189)
T cd01745 22 QYYVDAVRKAGGLPVLLPPVDDEEDLEQYLELLDGLLLTGGGDVDPPLYGEEPHPELGPIDPER---DAFELALLRAALE 98 (189)
T ss_pred HHHHHHHHHCCCEEEEeCCCCChHHHHHHHhhCCEEEECCCCCCChhhcCCCCCcccCCCChhH---HHHHHHHHHHHHH
Confidence 46789999999999888643211 1122457899999999998754421 11112211 2223567788885
Q ss_pred CCCCeEEEEehhhHHHHhc
Q 000572 1231 RPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1231 ~~~~piLGIC~G~QlL~~l 1249 (1414)
.++|+||||+|||+|+..
T Consensus 99 -~~~PilgiC~G~Q~l~~~ 116 (189)
T cd01745 99 -RGKPILGICRGMQLLNVA 116 (189)
T ss_pred -CCCCEEEEcchHHHHHHH
Confidence 789999999999999974
|
This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine |
| >PRK08250 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.4e-10 Score=125.90 Aligned_cols=182 Identities=14% Similarity=0.081 Sum_probs=112.3
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhh-hhcccchhHHHhhcchHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADV-LDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~-l~~g~~~a~~~l~~~~l~~ 1223 (1414)
|||+|+.-........+...+++.|.++.++.+..-..-+.++++||+||+.||...... .+ ..-|. ......+
T Consensus 1 m~i~vi~h~~~e~~g~~~~~~~~~g~~~~~~~~~~g~~~p~~~~~~d~vii~GGp~~~~~~~~-~~p~~----~~~~~~~ 75 (235)
T PRK08250 1 MRVHFIIHESFEAPGAYLKWAENRGYDISYSRVYAGEALPENADGFDLLIVMGGPQSPRTTRE-ECPYF----DSKAEQR 75 (235)
T ss_pred CeEEEEecCCCCCchHHHHHHHHCCCeEEEEEccCCCCCCCCccccCEEEECCCCCChhhccc-ccccc----chHHHHH
Confidence 588999877777777778888999998887654321111225678999999999643221 11 01121 1123456
Q ss_pred HHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEcc--CCCccccCCC
Q 000572 1224 QFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIED--SPAIMLKGME 1301 (1414)
Q Consensus 1224 ~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~--~~s~~l~g~~ 1301 (1414)
.|+++++ .++|+||||.|.|+|+.. +. |+ +.+|.. .|-.|..+++.. ...++++++.
T Consensus 76 ~i~~~~~-~~~PvlGIC~G~Qlla~a--lG---g~-------------V~~~~~--~e~G~~~v~lt~~g~~d~l~~~~~ 134 (235)
T PRK08250 76 LINQAIK-AGKAVIGVCLGAQLIGEA--LG---AK-------------YEHSPE--KEIGYFPITLTEAGLKDPLLSHFG 134 (235)
T ss_pred HHHHHHH-cCCCEEEEChhHHHHHHH--hC---ce-------------eccCCC--CceeEEEEEEccccccCchhhcCC
Confidence 7888885 899999999999999985 22 22 123322 345677777643 3467888773
Q ss_pred CcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccc
Q 000572 1302 GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1302 g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~ 1381 (1414)
..+.++..|++ .+.. |+ +-..+-..+ ..| +.++.- ..+++|+|||||-.-.
T Consensus 135 -~~~~v~~~H~d-~~~l--P~--------~a~~LA~s~----------~~~------~qa~~~-~~~~~g~QfHPE~~~~ 185 (235)
T PRK08250 135 -STLTVGHWHND-MPGL--TD--------QAKVLATSE----------GCP------RQIVQY-SNLVYGFQCHMEFTVE 185 (235)
T ss_pred -CCcEEEEEecc-eecC--CC--------CCEEEECCC----------CCC------ceEEEe-CCCEEEEeecCcCCHH
Confidence 45777778886 2332 21 223333221 112 344442 4689999999996543
|
|
| >cd01744 GATase1_CPSase Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II | Back alignment and domain information |
|---|
Probab=99.15 E-value=7.9e-10 Score=119.54 Aligned_cols=85 Identities=22% Similarity=0.237 Sum_probs=60.1
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|+|+.+ |+. +.+.++++++|+++..++.+... ......++|+|||+||.. +.-+ .....+.++
T Consensus 1 i~i~d~-g~~--~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~dgiil~GG~~--~~~~-----------~~~~~~~~~ 63 (178)
T cd01744 1 VVVIDF-GVK--HNILRELLKRGCEVTVVPYNTDA-EEILKLDPDGIFLSNGPG--DPAL-----------LDEAIKTVR 63 (178)
T ss_pred CEEEec-CcH--HHHHHHHHHCCCeEEEEECCCCH-HHHhhcCCCEEEECCCCC--ChhH-----------hHHHHHHHH
Confidence 467755 433 67789999999999998754211 112345799999999973 2111 123456677
Q ss_pred HHHhCCCCeEEEEehhhHHHHhc
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
++++ .++|+||||+|+|+|+..
T Consensus 64 ~~~~-~~~PvlGIC~G~Q~l~~~ 85 (178)
T cd01744 64 KLLG-KKIPIFGICLGHQLLALA 85 (178)
T ss_pred HHHh-CCCCEEEECHHHHHHHHH
Confidence 8874 789999999999999985
|
This group of sequences represents the small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II. CPSase II catalyzes the production of carbomyl phosphate (CP) from bicarbonate, glutamine and two molecules of MgATP. The reaction is believed to proceed by a series of four biochemical reactions involving a minimum of three discrete highly reactive intermediates. The synthesis of CP is critical for the initiation of two separate biosynthetic pathways. In one CP is coupled to aspartate, its carbon and nitrogen nuclei ultimately incorporated into the aromatic moieties of pyrimidine nucleotides. In the second pathway CP is condensed with ornithine at the start of the urea cycle and is utilized for the detoxification of ammonia and biosynthesis of arginine. CPSases may be encoded by one or by several genes, depending on the species. The E.coli enzyme is |
| >COG0150 PurM Phosphoribosylaminoimidazole (AIR) synthetase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.14 E-value=9.4e-10 Score=125.25 Aligned_cols=262 Identities=17% Similarity=0.166 Sum_probs=172.0
Q ss_pred cEEEEEecCC-CceEeEEEEccCCCCCCCCH-----HHHHHHHHHHHhhchhccCcccccccccccccccccCCCCcHHH
Q 000572 793 DVAVIAQTYT-DLTGGACAIGEQPIKGLLNP-----KAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAA 866 (1414)
Q Consensus 793 DaAVi~~~~~-~~~gla~s~g~~p~~~~~dP-----~~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~~~~~e~~~ 866 (1414)
=++++.++.. ....+++++|...-+..+-. -..|.-.|+-+++|+++.||+|+..++. ++... .+.+.
T Consensus 42 f~~lf~l~~~~~~p~Lv~~tDGVGTKl~~A~~~~k~dTiGID~VAM~VNDlv~~GAePl~flDY-----~A~gk-~~~~~ 115 (345)
T COG0150 42 FAGLFDLGQAYYKPVLVSGTDGVGTKLLLAEDAGKHDTIGIDLVAMCVNDLVVQGAEPLFFLDY-----LATGK-LDPEV 115 (345)
T ss_pred eeEEEEccCCCccceEEecCCCchHHHHHHHHhCCccccccchheeecchhhhcCcchHHHHhh-----hhcCC-CCHHH
Confidence 3566666531 11456677765322211100 1468889999999999999999775542 22221 23466
Q ss_pred HHHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCcc
Q 000572 867 MYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKR 946 (1414)
Q Consensus 867 l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~ 946 (1414)
..++++|+.+-|++.|++++||.|.--... +.+... =+.-+++|.|++ +++++..--++|| .||-+ -+.+-.
T Consensus 116 ~~~iv~GiaeGc~~ag~aLvGGETAeMPg~-y~~g~y----DlaG~~vGvvek-~~ii~g~~i~~GD-viigl-~SSG~H 187 (345)
T COG0150 116 AAQIVKGIAEGCKQAGCALVGGETAEMPGM-YRGGDY----DLAGFAVGVVEK-DEIIDGSKVKEGD-VIIGL-ASSGLH 187 (345)
T ss_pred HHHHHHHHHHHHHHhCCEEeccccccCCCc-ccCCce----eeeeeEEEEEEc-cccccccccCCCC-EEEEe-cCCCcC
Confidence 678999999999999999999998521110 111111 355688999986 4678877678998 55555 223444
Q ss_pred ccchHHHHHHhhhcC----CCCCCCCChHHHHH-------H-HHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeE
Q 000572 947 RLGGSALAQVFDQVG----NESPDLEDVPYLKR-------V-FETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYG 1014 (1414)
Q Consensus 947 ~LGGS~la~~~~~~~----~~~p~v~d~~~lk~-------~-~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G 1014 (1414)
.-|-|..-+++...+ +..|.-.. ..+.. . .+.+.+++++..|+++--||.||+.--|-.|- ..+++
T Consensus 188 SNGySLvRKi~~~~~~~~~~~~~~~~g-~~l~e~LL~PTrIYvk~vL~l~~~~~vkg~AHITGGG~~eNl~Rv~-p~~l~ 265 (345)
T COG0150 188 SNGYSLVRKIIEESGLDYDDELPEELG-KTLGEELLEPTRIYVKPVLALIKEGDVKGMAHITGGGFVENLPRVL-PEGLG 265 (345)
T ss_pred CCchHHHHHHHHhcCccccccCccccc-cCHHHHhcCCceeehHHHHHHHhcCCcceEEEecCCChhhhChhhc-Cccce
Confidence 455554444443211 11222100 01111 1 12366788888999999999999999999884 46799
Q ss_pred EEEEeCCCCC---------------chHHHhcccccceEEEEecCCHHHHHHHHHHcCCCEEEEEEEeCCC
Q 000572 1015 ITLDLNSEGN---------------SLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSH 1070 (1414)
Q Consensus 1015 ~~Idl~~~~~---------------~~~~~LFsE~~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~ 1070 (1414)
++|+.+..+. +.+...|+-.-|+++.|++++.+++.+.+++.|.++.+||+|..+.
T Consensus 266 a~id~~~~~~p~iF~~i~~~G~v~~~EM~rtFNmGvG~v~iv~~e~~~~~~~~l~~~g~~a~~iG~V~~~~ 336 (345)
T COG0150 266 AVIDKPSWPPPPIFKWLQKAGNVEREEMYRTFNMGVGMVLIVPEEDAEKALALLKEQGETAYVIGRVEAGE 336 (345)
T ss_pred EEEcCCCCCCcHHHHHHHHhcCCCHHHHHHHhcCccceEEEEcHHHHHHHHHHHHhcCCceEEEEEEEeCC
Confidence 9999876311 1122356766688999999999999999999999999999998753
|
|
| >PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.6e-10 Score=125.00 Aligned_cols=176 Identities=23% Similarity=0.298 Sum_probs=91.0
Q ss_pred HHHHHHHHHcCCceEEeeccc-ccCcccCccCcCEEEEcCCCC------chhhhhcccch--hHHHhhcchHHHHHHHHH
Q 000572 1159 REMSAAFYAAGFEPWDVTMSD-LINGAISLDEFRGIVFVGGFS------YADVLDSAKGW--SASIRFNQPLLNQFQEFY 1229 (1414)
Q Consensus 1159 ~~~~~Al~~aG~~~~~v~~~d-l~~~~~~l~~~dglvlPGG~s------~gD~l~~g~~~--a~~~l~~~~l~~~i~~f~ 1229 (1414)
.++.++++++|+.|+.++... ...-...++.+|||+||||.+ |+......... ..+..+ .-++.+..
T Consensus 27 ~~Yv~~i~~aG~~pv~ip~~~~~~~~~~~l~~idGlll~GG~~Di~P~~y~~~~~~~~~~~~~~rd~~----e~~l~~~a 102 (217)
T PF07722_consen 27 ASYVKAIEAAGGRPVPIPYDADDEELDELLDRIDGLLLPGGGSDIDPALYGEEPSPESGYIDPERDIF----ELALIRNA 102 (217)
T ss_dssp HHHHHHHHHTT-EEEEE-SS--HHHHHHHHHCSSEEEE---SS-T-GGGGT---BTTSHHHHHHHHHH----HHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEccCCCHHHHHHHHhhcCEEEEcCCccchhHhhcCCcccccCCCcCHHHHHH----HHHHHHHH
Confidence 467889999999999998652 111233577899999999994 44443222221 122222 22333333
Q ss_pred hCCCCeEEEEehhhHHHHhc--CccCCCCCCCccCCCCCCCCC-eeeecCCCceEEeeEEEEEccCCCccccCCCC-cEE
Q 000572 1230 KRPDTFSLGVCNGCQLMALL--GWIPGPQVGGVHGAGGDPSQP-RFVHNESGRFECRFSSVTIEDSPAIMLKGMEG-STL 1305 (1414)
Q Consensus 1230 ~~~~~piLGIC~G~QlL~~l--gllp~~~g~~~~~~~~~~~~p-~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g-~~~ 1305 (1414)
.+.++|+||||+|||+|+.. |-+- ... +...... +..++. .+ .+..+++. ..|. |+.+-+ ..+
T Consensus 103 ~~~~~PilGICrG~Q~lnv~~GGtl~-q~~------~~~~~~~~~~~~~~--~~--~~h~v~i~-~~s~-l~~~~~~~~~ 169 (217)
T PF07722_consen 103 LGRGKPILGICRGMQLLNVAFGGTLY-QDI------PDQPGFPDHRQHPQ--DF--PSHPVRIV-PGSL-LAKILGSEEI 169 (217)
T ss_dssp CCTT--EEEETHHHHHHHHHCCSSEE-SCC------CCSS-EEECEE-S---TS----EEEEEE-TTST-CCCTSHHCTE
T ss_pred HhcCCCEEEEcHHHHHHHHHhCCCce-eec------ccCcCccccccccc--cc--ccccceec-cCch-HHHHhCcCcc
Confidence 46899999999999999874 3221 000 0000001 111111 11 23355553 3344 444434 577
Q ss_pred EEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCc--EEEEccCCc
Q 000572 1306 GVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGR--HLAMMPHPE 1377 (1414)
Q Consensus 1306 ~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGr--vlg~m~HPE 1377 (1414)
.+...|..| +. + | .++..++.+ ++.| .|++|.+++++ ++|.|+|||
T Consensus 170 ~vns~Hhq~---v~-~-----l-~~~l~v~A~-------------s~Dg---~iEaie~~~~~~~~~GvQwHPE 217 (217)
T PF07722_consen 170 EVNSFHHQA---VK-P-----L-GEGLRVTAR-------------SPDG---VIEAIESPEHKYPILGVQWHPE 217 (217)
T ss_dssp EEEEEECEE---EC-C-----H-HCCEEEEEE-------------ECTS---SEEEEEECCESS-EEEESS-CC
T ss_pred eeecchhhh---hh-c-----c-CCCceEEEE-------------ecCC---cEEEEEEcCCCCCEEEEEeCCC
Confidence 888889743 22 2 2 234344443 2235 48999999988 999999998
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D. |
| >PRK11366 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.7e-09 Score=123.33 Aligned_cols=104 Identities=15% Similarity=0.133 Sum_probs=63.9
Q ss_pred CCCCEEEEEecC----CCc---CHHHHHHHHHHcCCceEEeecccc--cCcccCccCcCEEEEcCCC-C-----chhhhh
Q 000572 1142 TSKPKVAVIREE----GSN---GDREMSAAFYAAGFEPWDVTMSDL--INGAISLDEFRGIVFVGGF-S-----YADVLD 1206 (1414)
Q Consensus 1142 ~~~~kVaIl~~~----G~n---~~~~~~~Al~~aG~~~~~v~~~dl--~~~~~~l~~~dglvlPGG~-s-----~gD~l~ 1206 (1414)
+.||.|+|.... +.. -...+..++.++|+.++.+....- ..-...++.+|||||+||. + ||+...
T Consensus 5 m~~P~Igi~~~~~~~~~~~~~~~~~~y~~~i~~aGg~pv~lp~~~~~~~~~~~~l~~~DGlil~GG~~dv~P~~yg~~~~ 84 (254)
T PRK11366 5 MNNPVIGVVMCRNRLKGHATQTLQEKYLNAIIHAGGLPIALPHALAEPSLLEQLLPKLDGIYLPGSPSNVQPHLYGENGD 84 (254)
T ss_pred CCCCEEEEeCCCcccCcchHHHHHHHHHHHHHHCCCEEEEecCCCCCHHHHHHHHHhCCEEEeCCCCCCcCHhhcCCCCC
Confidence 357889987421 111 112467899999999988873211 0012235679999999995 2 333322
Q ss_pred cccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1207 SAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1207 ~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
.. |.. -.++.-..+.++.+++ .++|+||||.|+|+|+..
T Consensus 85 ~~--~~~-~~rD~~e~~li~~a~~-~~~PILGICrG~Qllnva 123 (254)
T PRK11366 85 EP--DAD-PGRDLLSMALINAALE-RRIPIFAICRGLQELVVA 123 (254)
T ss_pred CC--CCC-hhHHHHHHHHHHHHHH-CCCCEEEECHhHHHHHHH
Confidence 11 211 1122223455666674 789999999999999985
|
|
| >PRK05380 pyrG CTP synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.6e-09 Score=127.21 Aligned_cols=202 Identities=16% Similarity=0.169 Sum_probs=112.0
Q ss_pred CCEEEEEecCCCc--CHHHHHHHHHHcCCc----eEEeecc--cccC--cccCccCcCEEEEcCCCCchhhhhcccchhH
Q 000572 1144 KPKVAVIREEGSN--GDREMSAAFYAAGFE----PWDVTMS--DLIN--GAISLDEFRGIVFVGGFSYADVLDSAKGWSA 1213 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n--~~~~~~~Al~~aG~~----~~~v~~~--dl~~--~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~ 1213 (1414)
..+||++=-|-.- ...++.+||+.+|+. +.+.++. ++.. ....|+.+|||++||||. +...
T Consensus 288 ~v~IalVGKY~~l~DaY~Sv~eAL~hag~~~~~~v~i~wIdse~l~~~~~~~~L~~~DGIIlpGGfG--~~~~------- 358 (533)
T PRK05380 288 EVTIALVGKYVELPDAYKSVIEALKHAGIANDVKVNIKWIDSEDLEEENVAELLKGVDGILVPGGFG--ERGI------- 358 (533)
T ss_pred ceEEEEEeCccCCcHHHHHHHHHHHHHHHHcCCeeEEEEEChhhccCcchhhHhhcCCEEEecCCCC--cccc-------
Confidence 4689988554322 224778899888753 3443333 2332 234688999999999974 3221
Q ss_pred HHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhc--C-ccCCCCCCCccCCCCCCCCCee--e-e-----cCCCceEE
Q 000572 1214 SIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL--G-WIPGPQVGGVHGAGGDPSQPRF--V-H-----NESGRFEC 1282 (1414)
Q Consensus 1214 ~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l--g-llp~~~g~~~~~~~~~~~~p~l--~-~-----N~s~~fe~ 1282 (1414)
++..+.++...+ .++|+||||+|||+|+.. | +++..+... .++......|.+ . + +..+...-
T Consensus 359 -----~g~i~~i~~a~e-~~iPiLGIClGmQll~va~Ggnv~g~qda~s-~E~~~~t~~pvI~~~~~q~~~~~~ggtmrl 431 (533)
T PRK05380 359 -----EGKILAIRYARE-NNIPFLGICLGMQLAVIEFARNVLGLEDANS-TEFDPDTPHPVIDLMPEQKDVSDLGGTMRL 431 (533)
T ss_pred -----ccHHHHHHHHHH-CCCcEEEEchHHHHHHHHhcccccCcccCcc-cccCCCCCCCeEeeccccccccccCCcccc
Confidence 234556666664 899999999999999963 3 322111100 001111112221 1 1 11121111
Q ss_pred eeEEEEEccCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEE
Q 000572 1283 RFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAI 1362 (1414)
Q Consensus 1283 r~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi 1362 (1414)
..-.+++. ..|.+ ..+-|.. .++..|-+ ||.+ ++...+.+.+.|.++..+ +|+|. -|++|
T Consensus 432 g~h~v~i~-~gS~l-~~iyg~~-~i~ErhrH-ryeV-Ns~h~qal~~~GL~vsa~-------------s~Dgg--lVEaI 491 (533)
T PRK05380 432 GAYPCKLK-PGTLA-AEIYGKE-EIYERHRH-RYEV-NNKYREQLEKAGLVFSGT-------------SPDGR--LVEIV 491 (533)
T ss_pred cceeEEEC-CCChH-HHHhCCC-ceeeeccc-ceec-CHHHHHHHhhcCeEEEEE-------------cCCCC--cEEEE
Confidence 11244442 33443 3332332 34456643 4566 455667777777665544 55563 48888
Q ss_pred EcCCCc-EEEEccCCccccc
Q 000572 1363 CSPDGR-HLAMMPHPERCFL 1381 (1414)
Q Consensus 1363 ~s~dGr-vlg~m~HPEr~~~ 1381 (1414)
-.++.. ++|.|||||...+
T Consensus 492 El~~hpfflGVQwHPE~~s~ 511 (533)
T PRK05380 492 ELPDHPWFVGVQFHPEFKSR 511 (533)
T ss_pred EeCCCCEEEEEeCCCCCCCC
Confidence 887766 5699999997654
|
|
| >TIGR00337 PyrG CTP synthase | Back alignment and domain information |
|---|
Probab=99.07 E-value=6e-09 Score=126.97 Aligned_cols=202 Identities=16% Similarity=0.155 Sum_probs=111.0
Q ss_pred CCEEEEEecCCCc--CHHHHHHHHHHcCC--c--eEE--eecccccCc-ccCccCcCEEEEcCCCCchhhhhcccchhHH
Q 000572 1144 KPKVAVIREEGSN--GDREMSAAFYAAGF--E--PWD--VTMSDLING-AISLDEFRGIVFVGGFSYADVLDSAKGWSAS 1214 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n--~~~~~~~Al~~aG~--~--~~~--v~~~dl~~~-~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~ 1214 (1414)
.++||++--|-.- ...++.+||+.+|+ . +.. +..+++... ...|+++|||++||||.+.. .
T Consensus 289 ~v~IalVGKY~~~~daY~SI~eAL~~ag~~~~~~V~~~~i~se~i~~~~~~~L~~~dGIiLpGG~G~~~--~-------- 358 (525)
T TIGR00337 289 EVTIGIVGKYVELKDSYLSVIEALKHAGAKLDTKVNIKWIDSEDLEEEGAEFLKGVDGILVPGGFGERG--V-------- 358 (525)
T ss_pred CcEEEEEeCCcCCHHHHHHHHHHHHhCccccCCEEEEEEecHHHhhhhhhhhhcCCCEEEeCCCCCChh--h--------
Confidence 4689988544221 12367889999997 2 222 222233211 12478899999999995311 1
Q ss_pred HhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhc---CccCCCCCCCccCCCCCCCCCe--ee------ecCCCceEEe
Q 000572 1215 IRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL---GWIPGPQVGGVHGAGGDPSQPR--FV------HNESGRFECR 1283 (1414)
Q Consensus 1215 ~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l---gllp~~~g~~~~~~~~~~~~p~--l~------~N~s~~fe~r 1283 (1414)
.+..+.++.+. +.++|+||||+|||+|+.. .+++...+.. .++......|- +. .+..|...-.
T Consensus 359 ----~g~i~ai~~a~-e~~iP~LGIClG~Qll~i~~grnv~gl~~A~s-~Ef~~~~~~pVi~l~~~~~~~~~~GGTmRLG 432 (525)
T TIGR00337 359 ----EGKILAIKYAR-ENNIPFLGICLGMQLAVIEFARNVLGLKGANS-TEFDPETKYPVVDLLPEQKDISDLGGTMRLG 432 (525)
T ss_pred ----cChHHHHHHHH-HcCCCEEEEcHHHHHHHHHHHHHhcCCCCCCc-cccCCCCCCCeeeccCcccccccCCceeecc
Confidence 22344566665 3789999999999999753 2232111110 00111222332 11 1223333333
Q ss_pred eEEEEEccCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEE
Q 000572 1284 FSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAIC 1363 (1414)
Q Consensus 1284 ~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~ 1363 (1414)
.-.+.+. ..|.+.+-+.... +..+|-++ |.+ ++...+.+...|..+..+ +|||. -|+||-
T Consensus 433 ~h~v~i~-~gS~L~~iyG~~~--i~erhrHr-y~V-Ns~h~q~l~~~GL~vsa~-------------s~Dgg--~VEaIE 492 (525)
T TIGR00337 433 LYPCILK-PGTLAFKLYGKEE--VYERHRHR-YEV-NNEYREQLENKGLIVSGT-------------SPDGR--LVEIIE 492 (525)
T ss_pred ceEEEEC-CCChHHHHhCCCc--eeecccce-EEE-CHHHHHhhhhCCeEEEEE-------------ECCCC--EEEEEE
Confidence 3455663 3355433332222 23455443 556 455666776666555433 56652 388998
Q ss_pred cCCCcE-EEEccCCccccc
Q 000572 1364 SPDGRH-LAMMPHPERCFL 1381 (1414)
Q Consensus 1364 s~dGrv-lg~m~HPEr~~~ 1381 (1414)
.++-+. +|.|+|||....
T Consensus 493 ~~~hpfflGVQwHPE~~s~ 511 (525)
T TIGR00337 493 LPDHPFFVACQFHPEFTSR 511 (525)
T ss_pred ECCCCeEEEEecCCCCCCC
Confidence 877764 599999996654
|
CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. The enzyme catalyzes the reaction L-glutamine + H2O + UTP + ATP = CTP + phosphate + ADP + L-glutamate. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. This gene has been found circa 500 bp 5' upstream of enolase in both beta (Nitrosomonas europaea) and gamma (E.coli) subdivisions of proteobacterium (FEMS Microbiol Lett 1998 Aug 1;165(1):153-7). |
| >COG2071 Predicted glutamine amidotransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.1e-09 Score=117.53 Aligned_cols=195 Identities=21% Similarity=0.283 Sum_probs=108.1
Q ss_pred HHHHHHHHcCCceEEeecc-cccCcccCccCcCEEEEcCCCC-----chhhhhcccc--hhHHHhhcchHHHHHHHHHhC
Q 000572 1160 EMSAAFYAAGFEPWDVTMS-DLINGAISLDEFRGIVFVGGFS-----YADVLDSAKG--WSASIRFNQPLLNQFQEFYKR 1231 (1414)
Q Consensus 1160 ~~~~Al~~aG~~~~~v~~~-dl~~~~~~l~~~dglvlPGG~s-----~gD~l~~g~~--~a~~~l~~~~l~~~i~~f~~~ 1231 (1414)
.+.+|+.++|.-|.+++.- |-..-...++..|||+++||.. ||.......+ ...+..+ -..-|++.++
T Consensus 30 ~yv~ai~~aGg~pillP~~~d~~~~~~~l~~iDgliltGg~nV~P~~YGee~~~~~~~~~p~RD~~---E~aLi~~ALe- 105 (243)
T COG2071 30 DYVDAIIKAGGIPILLPALEDPEDARQYLDLIDGLILTGGSNVDPSLYGEEPSEKDGPYDPERDAF---ELALIRAALE- 105 (243)
T ss_pred HHHHHHHHcCCceEEecCCCCHHHHHHHHhhccEEEecCCCcCCHHHcCCCCCcccCCCCccccHH---HHHHHHHHHH-
Confidence 5677888899999999832 2211233467799999999942 5555532221 1111111 1233667774
Q ss_pred CCCeEEEEehhhHHHHhc--CccCCCCCCCccCCCCCCCCCeeeecCCC--ceEEeeEEEEEccCCCccccCCCCcE-EE
Q 000572 1232 PDTFSLGVCNGCQLMALL--GWIPGPQVGGVHGAGGDPSQPRFVHNESG--RFECRFSSVTIEDSPAIMLKGMEGST-LG 1306 (1414)
Q Consensus 1232 ~~~piLGIC~G~QlL~~l--gllp~~~g~~~~~~~~~~~~p~l~~N~s~--~fe~r~v~v~i~~~~s~~l~g~~g~~-~~ 1306 (1414)
+++||||||.|+|+|+.. |-|- .+.. ....++.|.... .++. ..+.|+ ..|.+ ..+-|.. +-
T Consensus 106 ~~iPILgICRG~QllNVa~GGtL~-q~i~--------~~~~~~~H~~~~~~~~~~--H~V~i~-~~s~L-a~i~g~~~~~ 172 (243)
T COG2071 106 RGIPILGICRGLQLLNVALGGTLY-QDIS--------EQPGHIDHRQPNPVHIES--HEVHIE-PGSKL-AKILGESEFM 172 (243)
T ss_pred cCCCEEEEccchHHHHHHhcCeee-hhhh--------cccccccccCCCCcccce--eEEEec-CCccH-HHhcCcccee
Confidence 899999999999999975 3332 1100 000011111111 1111 144553 23443 3332322 33
Q ss_pred EEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcC-CCcEEEEccCCccccccccC
Q 000572 1307 VWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSP-DGRHLAMMPHPERCFLMWQY 1385 (1414)
Q Consensus 1307 ~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~-dGrvlg~m~HPEr~~~~~q~ 1385 (1414)
+..-|. ..+++|...=.|.++ .|.|- |+||-+. +..++|.|.|||.....
T Consensus 173 VNS~Hh---------QaIk~La~~L~V~A~--------------a~DG~---VEAie~~~~~fvlGVQWHPE~~~~~--- 223 (243)
T COG2071 173 VNSFHH---------QAIKKLAPGLVVEAR--------------APDGT---VEAVEVKNDAFVLGVQWHPEYLVDT--- 223 (243)
T ss_pred ecchHH---------HHHHHhCCCcEEEEE--------------CCCCc---EEEEEecCCceEEEEecChhhhccC---
Confidence 333332 234555443333332 23464 7888877 58999999999976652
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1386 PWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1386 ~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
...-+++|+.+.+.|
T Consensus 224 -------------~~~~~~LFe~F~~~~ 238 (243)
T COG2071 224 -------------NPLSLALFEAFVNAC 238 (243)
T ss_pred -------------ChHHHHHHHHHHHHH
Confidence 226788999888776
|
|
| >cd01746 GATase1_CTP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase | Back alignment and domain information |
|---|
Probab=99.06 E-value=7.5e-09 Score=116.39 Aligned_cols=197 Identities=18% Similarity=0.156 Sum_probs=103.5
Q ss_pred EEEEEecCCCc--CHHHHHHHHHHcC----CceEEeecc--cccCc--ccCccCcCEEEEcCCCCchhhhhcccchhHHH
Q 000572 1146 KVAVIREEGSN--GDREMSAAFYAAG----FEPWDVTMS--DLING--AISLDEFRGIVFVGGFSYADVLDSAKGWSASI 1215 (1414)
Q Consensus 1146 kVaIl~~~G~n--~~~~~~~Al~~aG----~~~~~v~~~--dl~~~--~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~ 1215 (1414)
+|+++=.+... +..+..++|..++ ..+..+.++ ++... ...++++||||+|||+++.+.
T Consensus 2 ~i~lvg~~~~~~day~s~~~~L~~a~~~~~~~v~~~~i~~~~~~~~~~~~~l~~~dgivl~GG~~~~~~----------- 70 (235)
T cd01746 2 RIALVGKYVELPDAYLSVLEALKHAGIALGVKLEIKWIDSEDLEEENAEEALKGADGILVPGGFGIRGV----------- 70 (235)
T ss_pred EEEEEECCcCCHHHHHHHHHHHHHHHHHcCCeeEEEEeChhhcCccchhhhhccCCEEEECCCCCCcch-----------
Confidence 67777544322 2225556666543 444444332 22222 246888999999999965332
Q ss_pred hhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhc--Ccc---CCCCCCCccCCCCCCCCCeee-e-------cCCCceEE
Q 000572 1216 RFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL--GWI---PGPQVGGVHGAGGDPSQPRFV-H-------NESGRFEC 1282 (1414)
Q Consensus 1216 l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l--gll---p~~~g~~~~~~~~~~~~p~l~-~-------N~s~~fe~ 1282 (1414)
.+..+.++..++ .++|+||||+|||+|+.. |-+ +...... .......|.+. - +..+.+.=
T Consensus 71 ---~~~~~~i~~~~~-~~~PvlGIClG~Q~l~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~rl 143 (235)
T cd01746 71 ---EGKILAIKYARE-NNIPFLGICLGMQLAVIEFARNVLGLPDANSTE---FDPDTPHPVVDLMPEQKGVKDLGGTMRL 143 (235)
T ss_pred ---hhHHHHHHHHHH-CCceEEEEEhHHHHHHHHHHHHhcCCccCCccc---cCCCCCCCEEEECcccccccccCccccc
Confidence 123456677764 799999999999999864 222 1111000 00111222211 0 11100000
Q ss_pred eeEEEEEccCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCC-CCCcCceeE
Q 000572 1283 RFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNV-NGSPLGVAA 1361 (1414)
Q Consensus 1283 r~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NP-nGs~~~iag 1361 (1414)
.-..++| ...|.+.+-+....+.+...|.+| + ++...+.+..++..+..+ ++ +| .|++
T Consensus 144 ~~h~v~i-~~~s~l~~~~g~~~~~~n~~H~~~---v-~~~~~~~~~~~~l~v~a~-------------~~ddg---~iea 202 (235)
T cd01746 144 GAYPVIL-KPGTLAHKYYGKDEVEERHRHRYE---V-NPEYVDELEEAGLRFSGT-------------DPDGG---LVEI 202 (235)
T ss_pred CceEEEE-CCCChHHHHhCCCEEEEecCcccc---c-CHHHHHHHhhCCeEEEEE-------------eCCCC---eEEE
Confidence 0124555 344554333333455655567633 3 343444554555444433 33 34 4889
Q ss_pred EEcCCCcEE-EEccCCccccc
Q 000572 1362 ICSPDGRHL-AMMPHPERCFL 1381 (1414)
Q Consensus 1362 i~s~dGrvl-g~m~HPEr~~~ 1381 (1414)
|-.++..++ |.|+|||....
T Consensus 203 ie~~~~pf~lgvQ~HPE~~~~ 223 (235)
T cd01746 203 VELPDHPFFVGTQFHPEFKSR 223 (235)
T ss_pred EEcCCCCcEEEEECCCCCcCC
Confidence 988777765 99999997654
|
Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase (CTP). CTP is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. CTPs produce CTP from UTP and glutamine and regulate intracellular CTP levels through interactions with four ribonucleotide triphosphates. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. CTP is derived form UTP in three separate steps involving two active sites. In one active site, the UTP O4 oxygen is activated by Mg-ATP-dependent phosphorylation, followed by displacement of the resulting 4-phosphate moiety by ammonia. At a separate site, ammonia is generated via rate limiting glutamine hydrolysis (glutaminase) activity. A gated channel that spans between the glutamine hydrolysis and amidoligase active sites provides a path for ammonia diffusion. CTPs belong to th |
| >PRK12564 carbamoyl phosphate synthase small subunit; Reviewed | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.6e-09 Score=123.81 Aligned_cols=86 Identities=23% Similarity=0.281 Sum_probs=62.8
Q ss_pred CCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCc--cCcCEEEEcCCCCchhhhhcccchhHHHhhcchH
Q 000572 1144 KPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISL--DEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPL 1221 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l--~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l 1221 (1414)
++||+|+.+ |. -+.+.++|++.|+++.+++.+.. ...+ .++|+|+|+||...+... ...
T Consensus 177 ~~~I~viD~-G~--k~nivr~L~~~G~~v~vvp~~~~---~~~i~~~~~DGIvLSgGPgdp~~~-------------~~~ 237 (360)
T PRK12564 177 KYKVVAIDF-GV--KRNILRELAERGCRVTVVPATTT---AEEILALNPDGVFLSNGPGDPAAL-------------DYA 237 (360)
T ss_pred CCEEEEEeC-Cc--HHHHHHHHHHCCCEEEEEeCCCC---HHHHHhcCCCEEEEeCCCCChHHH-------------HHH
Confidence 579999975 64 46789999999999998874421 1122 258999999997422111 234
Q ss_pred HHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1222 LNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1222 ~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
.+.++++++ .++|+||||+|+|+|+.+
T Consensus 238 ~~~i~~~~~-~~~PilGIClG~QlLa~a 264 (360)
T PRK12564 238 IEMIRELLE-KKIPIFGICLGHQLLALA 264 (360)
T ss_pred HHHHHHHHH-cCCeEEEECHHHHHHHHH
Confidence 566777874 689999999999999975
|
|
| >cd01747 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.6e-10 Score=126.34 Aligned_cols=180 Identities=14% Similarity=0.137 Sum_probs=95.6
Q ss_pred HHHHHHHHcCCceEEeecccccC-cccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCC--CeE
Q 000572 1160 EMSAAFYAAGFEPWDVTMSDLIN-GAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPD--TFS 1236 (1414)
Q Consensus 1160 ~~~~Al~~aG~~~~~v~~~dl~~-~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~--~pi 1236 (1414)
++.++++++|+.++.|.+..-.. -+..++.+|||++|||...-+. ..|.... ..+.+...+.. +.| .|+
T Consensus 24 ~Yv~~l~~aG~~vvpi~~~~~~~~l~~~l~~~dG~l~~Gg~~~~~~----~~~~~~~---~~l~~~a~~~~-~~g~~~Pv 95 (273)
T cd01747 24 SYVKFLESAGARVVPIWINESEEYYDKLFKSINGILFPGGAVDIDT----SGYARTA---KIIYNLALERN-DAGDYFPV 95 (273)
T ss_pred HHHHHHHHCCCeEEEEEeCCcHHHHHHHHhhCCEEEECCCCCcCCc----cccchHH---HHHHHHHHHhh-hcCCCCcE
Confidence 57889999999988877541100 1123778999999999742221 1121111 12222323332 233 799
Q ss_pred EEEehhhHHHHhc-C-ccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEc--cCCCccccCCCCc-------EE
Q 000572 1237 LGVCNGCQLMALL-G-WIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIE--DSPAIMLKGMEGS-------TL 1305 (1414)
Q Consensus 1237 LGIC~G~QlL~~l-g-llp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~--~~~s~~l~g~~g~-------~~ 1305 (1414)
+|||+|||+|+.+ | -+. .. .+.-..| .+..++.. ...|++|+++..+ ..
T Consensus 96 ~GiClG~QlL~~~~gg~~~---~~----------~~~~~~~-------~~~~l~~t~~~~~s~lF~~~p~~l~~~l~~~~ 155 (273)
T cd01747 96 WGTCLGFELLTYLTSGETL---LL----------EATEATN-------SALPLNFTEDALQSRLFKRFPPDLLKSLATEP 155 (273)
T ss_pred EEEcHHHHHHHHHhCCCcc---cc----------CCCcccc-------ceEEEEEccccccChhhhcCCHHHHHHHhccc
Confidence 9999999999984 2 110 00 0000111 12233332 2357778777321 11
Q ss_pred EEEEeeccceEEeCChhhHH---HHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccccc
Q 000572 1306 GVWAAHGEGRAYFPDDGVLD---RILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLM 1382 (1414)
Q Consensus 1306 ~~~~~HgeGr~~~~~~~~~~---~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~ 1382 (1414)
.+-..|+ |.+ +++.+. .|. +....+.+.+ +.||. .-|++|...+-+++|+|||||++...
T Consensus 156 ~~~~~Hs---~~v-~~~~~~~~~~l~-~~~~vla~~~-----------d~~g~-~fis~ie~~~~pi~gvQFHPEks~fe 218 (273)
T cd01747 156 LTMNNHR---YGI-SPENFTENGLLS-DFFNVLTTND-----------DWNGV-EFISTVEAYKYPIYGVQWHPEKNAFE 218 (273)
T ss_pred HHHhhcc---ccc-CHhhcccccccc-cceEEEEEEe-----------cCCCc-eEEEEEEecCCceEEEecCCCccccc
Confidence 2235788 344 232211 111 1112233322 11232 34788887777999999999999776
Q ss_pred cc
Q 000572 1383 WQ 1384 (1414)
Q Consensus 1383 ~q 1384 (1414)
|-
T Consensus 219 w~ 220 (273)
T cd01747 219 WK 220 (273)
T ss_pred cc
Confidence 54
|
Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase. gamma-Glutamyl Hydrolase catalyzes the cleavage of the gamma-glutamyl chain of folylpoly-gamma-glutamyl substrates and is a central enzyme in folyl and antifolyl poly-gamma-glutamate metabolism. GATase activity involves the removal of the ammonia group from a glutamate molecule and its subsequent transfer to a specific substrate, thus creating a new carbon-nitrogen group on the substrate. gamma-Glutamyl hydrolases belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. |
| >PLN02327 CTP synthase | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.4e-08 Score=123.81 Aligned_cols=203 Identities=15% Similarity=0.094 Sum_probs=107.7
Q ss_pred CCEEEEEecCCCc--CHHHHHHHHHHcC----CceEEeec--ccccCcc------------cCccCcCEEEEcCCCCchh
Q 000572 1144 KPKVAVIREEGSN--GDREMSAAFYAAG----FEPWDVTM--SDLINGA------------ISLDEFRGIVFVGGFSYAD 1203 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n--~~~~~~~Al~~aG----~~~~~v~~--~dl~~~~------------~~l~~~dglvlPGG~s~gD 1203 (1414)
..+||++--|=.- ...++..||+.|| ..+.+.++ +++.... ..|.++|||++|||| ||
T Consensus 297 ~v~IalVGKY~~l~DAY~Si~eAL~hA~~~~~~~v~i~wI~se~l~~~~~~~~~~~y~~~~~~L~~~DGIvvpGGf--G~ 374 (557)
T PLN02327 297 PVRIAMVGKYTGLSDSYLSVLKALLHASVACSRKLVIDWVAASDLEDETAKETPDAYAAAWKLLKGADGILVPGGF--GD 374 (557)
T ss_pred ceEEEEEecccCCcHhHHHHHHHHHHHHHHcCCeeEEEEEchhhcCCcccccccchhhhhHHhhccCCEEEeCCCC--CC
Confidence 3578888443111 1135667777664 45555444 3343221 348899999999998 33
Q ss_pred hhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhc---CccCCCCCCCccCCCCCCCCCee--eecCCC
Q 000572 1204 VLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL---GWIPGPQVGGVHGAGGDPSQPRF--VHNESG 1278 (1414)
Q Consensus 1204 ~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l---gllp~~~g~~~~~~~~~~~~p~l--~~N~s~ 1278 (1414)
.-. .+...+++... +.++|+||||+|||+|+.. .+++..+ +.-.++.+....|.+ ....+.
T Consensus 375 ~~~------------~G~i~ai~~ar-e~~iP~LGIClGmQl~viefaRnvlG~~d-AnS~Efdp~t~~pvI~~m~e~~~ 440 (557)
T PLN02327 375 RGV------------EGKILAAKYAR-ENKVPYLGICLGMQIAVIEFARSVLGLKD-ANSTEFDPETPNPCVIFMPEGSK 440 (557)
T ss_pred ccc------------ccHHHHHHHHH-HcCCCEEEEcHHHHHHHHHHHHhhcCCcC-CCccccCCCCCCCEEEEehhccc
Confidence 211 12233455554 4799999999999999862 2333211 110112222333432 211110
Q ss_pred ceEEeeEEEEEcc-------CCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCC
Q 000572 1279 RFECRFSSVTIED-------SPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFN 1351 (1414)
Q Consensus 1279 ~fe~r~v~v~i~~-------~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~N 1351 (1414)
...--+++.-. ..|.. ..+-|....+.-.|-++ |.+ ++...+.|.+.+..+... +
T Consensus 441 --~~~GGtMRLG~~~~~~~~~~S~l-~~iYg~~~~VnerHrHR-YeV-N~q~v~~le~~gL~vsa~-------------s 502 (557)
T PLN02327 441 --THMGGTMRLGSRRTYFQTPDCKS-AKLYGNVSFVDERHRHR-YEV-NPEMVPRLEKAGLSFVGK-------------D 502 (557)
T ss_pred --ccCCceEECCCcccccCCCCCHH-HHHhCCccceeeeeccc-ccc-CHHHHHHHhhcCcEEEEE-------------c
Confidence 11011233322 22222 22223221233455443 566 566677777777655432 4
Q ss_pred CCCCcCceeEEEcCCCcEE-EEccCCcccccc
Q 000572 1352 VNGSPLGVAAICSPDGRHL-AMMPHPERCFLM 1382 (1414)
Q Consensus 1352 PnGs~~~iagi~s~dGrvl-g~m~HPEr~~~~ 1382 (1414)
|+|. -|+++-.++.+.+ |.|||||....+
T Consensus 503 ~dg~--~IEaiE~~~~pffvGVQfHPE~~s~p 532 (557)
T PLN02327 503 ETGR--RMEIVELPSHPFFVGVQFHPEFKSRP 532 (557)
T ss_pred CCCC--EEEEEEeCCCCEEEEEEcCCCCCCCC
Confidence 6663 3899977788866 999999977653
|
|
| >COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.6e-08 Score=107.53 Aligned_cols=187 Identities=19% Similarity=0.171 Sum_probs=118.9
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccC-cccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLIN-GAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~-~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~ 1223 (1414)
++|.+|..+-+. -+.++..|++.|+++.++. +|... ....-..+|+|||.=|...++ ++|. ..+
T Consensus 2 ~~IL~IDNyDSF-tyNLv~yl~~lg~~v~V~r-nd~~~~~~~~~~~pd~iviSPGPG~P~--d~G~-----------~~~ 66 (191)
T COG0512 2 MMILLIDNYDSF-TYNLVQYLRELGAEVTVVR-NDDISLELIEALKPDAIVISPGPGTPK--DAGI-----------SLE 66 (191)
T ss_pred ceEEEEECccch-HHHHHHHHHHcCCceEEEE-CCccCHHHHhhcCCCEEEEcCCCCChH--Hcch-----------HHH
Confidence 578999877766 3557888999998887776 44111 111223489999988887665 3321 355
Q ss_pred HHHHHHhCCCCeEEEEehhhHHHHhc--CccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCC
Q 000572 1224 QFQEFYKRPDTFSLGVCNGCQLMALL--GWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGME 1301 (1414)
Q Consensus 1224 ~i~~f~~~~~~piLGIC~G~QlL~~l--gllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~ 1301 (1414)
.|++|. ..+|+||||+|.|.|++. |-+-.. +...+- + +. .|..+.+.+|+|+.
T Consensus 67 ~i~~~~--~~~PiLGVCLGHQai~~~fGg~V~~a--------------~~~~HG---K-----~s-~i~h~g~~iF~glp 121 (191)
T COG0512 67 LIRRFA--GRIPILGVCLGHQAIAEAFGGKVVRA--------------KEPMHG---K-----TS-IITHDGSGLFAGLP 121 (191)
T ss_pred HHHHhc--CCCCEEEECccHHHHHHHhCCEEEec--------------CCCcCC---e-----ee-eeecCCcccccCCC
Confidence 677773 679999999999999986 333200 011121 0 11 33345578899994
Q ss_pred CcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccc
Q 000572 1302 GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1302 g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~ 1381 (1414)
+.+++---|+ ..+..+...+ .......+++ | .-|=||-.++..++|+|||||-..-
T Consensus 122 -~~f~v~RYHS---Lvv~~~~lP~-----~l~vtA~~~d-------------~--~~IMai~h~~~pi~gvQFHPESilT 177 (191)
T COG0512 122 -NPFTVTRYHS---LVVDPETLPE-----ELEVTAESED-------------G--GVIMAVRHKKLPIYGVQFHPESILT 177 (191)
T ss_pred -CCCEEEeeEE---EEecCCCCCC-----ceEEEEEeCC-------------C--CEEEEEeeCCCCEEEEecCCccccc
Confidence 3577767887 5543211111 1223333321 1 1388999999999999999995433
Q ss_pred cccCCCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1382 MWQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1382 ~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
.-+.+|++|+.+|+
T Consensus 178 ------------------~~G~~il~Nfl~~~ 191 (191)
T COG0512 178 ------------------EYGHRILENFLRLA 191 (191)
T ss_pred ------------------cchHHHHHHHHhhC
Confidence 24799999999885
|
|
| >PRK09522 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.1e-08 Score=127.53 Aligned_cols=185 Identities=14% Similarity=0.125 Sum_probs=112.2
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCc--ccCcc--CcCEEEEcCCCCchhhhhcccchhHHHhhcch
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLING--AISLD--EFRGIVFVGGFSYADVLDSAKGWSASIRFNQP 1220 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~--~~~l~--~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~ 1220 (1414)
+||.||.++.+.. +-+.+.|++.|.++.+++ ++.... ...+. ++++|||.||...... .+.
T Consensus 2 ~~iLiIDn~dsft-~nl~~~lr~~g~~v~V~~-~~~~~~~~~~~l~~~~~~~IIlSpGPg~p~d--~~~----------- 66 (531)
T PRK09522 2 ADILLLDNIDSFT-YNLADQLRSNGHNVVIYR-NHIPAQTLIERLATMSNPVLMLSPGPGVPSE--AGC----------- 66 (531)
T ss_pred CeEEEEeCCChHH-HHHHHHHHHCCCCEEEEE-CCCCCccCHHHHHhcCcCEEEEcCCCCChhh--CCC-----------
Confidence 4799998887774 446888999999988876 322111 11232 3679999999864332 110
Q ss_pred HHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCC
Q 000572 1221 LLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGM 1300 (1414)
Q Consensus 1221 l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~ 1300 (1414)
..+.++. +. .++||||||.|+|+|+.. +. |. +.++....| .++. .+......+|.++
T Consensus 67 ~~~i~~~-~~-~~iPILGIClG~QlLa~a--~G---G~-------------V~~~~~~~~--G~~~-~i~~~~~~lf~~~ 123 (531)
T PRK09522 67 MPELLTR-LR-GKLPIIGICLGHQAIVEA--YG---GY-------------VGQAGEILH--GKAS-SIEHDGQAMFAGL 123 (531)
T ss_pred CHHHHHH-Hh-cCCCEEEEcHHHHHHHHh--cC---CE-------------EEeCCceee--eeEE-EEeecCCccccCC
Confidence 1122333 32 589999999999999985 22 22 111111111 1221 1222334567777
Q ss_pred CCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccc
Q 000572 1301 EGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCF 1380 (1414)
Q Consensus 1301 ~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~ 1380 (1414)
. ..+++|..|++ .+.+ + ..+..++.+.| | -+.++...+.+++|+|||||...
T Consensus 124 ~-~~~~v~~~Hs~---~v~~------l-P~~l~vlA~sd--------------~---~v~ai~~~~~~i~GVQFHPEs~~ 175 (531)
T PRK09522 124 T-NPLPVARYHSL---VGSN------I-PAGLTINAHFN--------------G---MVMAVRHDADRVCGFQFHPESIL 175 (531)
T ss_pred C-CCcEEEEehhe---eccc------C-CCCcEEEEecC--------------C---CEEEEEECCCCEEEEEecCcccc
Confidence 4 35889999984 3211 1 11223333322 3 37888887889999999999765
Q ss_pred ccccCCCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1381 LMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1381 ~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
-. -|.+||+|+++||
T Consensus 176 T~------------------~G~~il~NFl~~~ 190 (531)
T PRK09522 176 TT------------------QGARLLEQTLAWA 190 (531)
T ss_pred Cc------------------chHHHHHHHHHHH
Confidence 42 4899999999886
|
|
| >cd01750 GATase1_CobQ Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ) | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.4e-09 Score=119.14 Aligned_cols=88 Identities=18% Similarity=0.252 Sum_probs=74.2
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQ 1226 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~ 1226 (1414)
|+|+.++...|..++.+++++.|++++.++.. .+++++|+|+||||+++.+.+. .+.+..+++.|+
T Consensus 1 ~~~~~y~~~gN~~~l~~~~~~~G~~~~~~~~~------~~~~~~d~lilpGg~~~~~~~~--------~~~~~~~~~~i~ 66 (194)
T cd01750 1 IAVIRYPDISNFTDLDPLAREPGVDVRYVEVP------EGLGDADLIILPGSKDTIQDLA--------WLRKRGLAEAIK 66 (194)
T ss_pred CEeecCCCccCHHHHHHHHhcCCceEEEEeCC------CCCCCCCEEEECCCcchHHHHH--------HHHHcCHHHHHH
Confidence 57788887889999999999999999988732 2377899999999998876654 344567899999
Q ss_pred HHHhCCCCeEEEEehhhHHHHhc
Q 000572 1227 EFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1227 ~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
++++ .|+|+||||+|||+|++.
T Consensus 67 ~~~~-~g~pvlgiC~G~qlL~~~ 88 (194)
T cd01750 67 NYAR-AGGPVLGICGGYQMLGKY 88 (194)
T ss_pred HHHH-CCCcEEEECHHHHHhhhh
Confidence 9995 899999999999999985
|
Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ). CobQ plays a role in cobalamin biosythesis. CobQ catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin. CobQ belongs to the triad family of amidotransferases. Two of the three residues of the catalytic triad that are involved in glutamine binding, hydrolysis and transfer of the resulting ammonia to the acceptor substrate in other triad aminodotransferases are conserved in CobQ. |
| >PRK07053 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.2e-08 Score=114.85 Aligned_cols=178 Identities=18% Similarity=0.140 Sum_probs=108.3
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCc--hhhhhcccchhHHHhhcchHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSY--ADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~--gD~l~~g~~~a~~~l~~~~l~ 1222 (1414)
++|.||.---..+...+..+|++.|.++.++...+-.....++++||+||++||... .+.. .-|. ..+.
T Consensus 3 ~~ilviqh~~~e~~g~i~~~L~~~g~~~~v~~~~~~~~~~~~~~~~d~lii~Ggp~~~~d~~~---~p~~------~~~~ 73 (234)
T PRK07053 3 KTAVAIRHVAFEDLGSFEQVLGARGYRVRYVDVGVDDLETLDALEPDLLVVLGGPIGVYDDEL---YPFL------APEI 73 (234)
T ss_pred ceEEEEECCCCCCChHHHHHHHHCCCeEEEEecCCCccCCCCccCCCEEEECCCCCCCCCCCc---CCcH------HHHH
Confidence 468888665555667789999999999888865321111235678999999998632 1111 1132 2456
Q ss_pred HHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEcc--CCCccccCC
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIED--SPAIMLKGM 1300 (1414)
Q Consensus 1223 ~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~--~~s~~l~g~ 1300 (1414)
+.|+++++ .++|+||||.|+|+|++. +. |. +.+| ...|-.|..+++.. ..++++ ++
T Consensus 74 ~~i~~~~~-~~~PvlGIC~G~Qlla~a--lG---g~-------------V~~~--~~~e~G~~~i~~t~~g~~~pl~-~~ 131 (234)
T PRK07053 74 ALLRQRLA-AGLPTLGICLGAQLIARA--LG---AR-------------VYPG--GQKEIGWAPLTLTDAGRASPLR-HL 131 (234)
T ss_pred HHHHHHHH-CCCCEEEECccHHHHHHH--cC---Cc-------------EecC--CCCeEeEEEEEEeccccCChhh-cC
Confidence 77888885 789999999999999985 11 22 1122 12455677777643 345553 45
Q ss_pred CCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccc
Q 000572 1301 EGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCF 1380 (1414)
Q Consensus 1301 ~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~ 1380 (1414)
. ..+++...|++- +.. |+ +-..+.-.+ . .| +.++.- .+|++|+|||||-+.
T Consensus 132 ~-~~~~~~~~H~d~-~~l--P~--------ga~~La~s~-------~---~~------~qaf~~-g~~~~g~QfHpE~~~ 182 (234)
T PRK07053 132 G-AGTPVLHWHGDT-FDL--PE--------GATLLASTP-------A---CR------HQAFAW-GNHVLALQFHPEARE 182 (234)
T ss_pred C-CcceEEEEeCCE-Eec--CC--------CCEEEEcCC-------C---CC------eeEEEe-CCCEEEEeeCccCCH
Confidence 3 446766778753 332 22 222221111 1 12 344442 568999999999776
Q ss_pred cc
Q 000572 1381 LM 1382 (1414)
Q Consensus 1381 ~~ 1382 (1414)
..
T Consensus 183 ~~ 184 (234)
T PRK07053 183 DR 184 (234)
T ss_pred HH
Confidence 53
|
|
| >TIGR01823 PabB-fungal aminodeoxychorismate synthase, fungal clade | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.4e-08 Score=131.03 Aligned_cols=196 Identities=15% Similarity=0.121 Sum_probs=110.5
Q ss_pred CCCEEEEEecCCCcCHHHHHHHHHHc-C--CceEEeecccccCcc-cCccCcCEEEEcCCCCchhhhhcccchhHHHhhc
Q 000572 1143 SKPKVAVIREEGSNGDREMSAAFYAA-G--FEPWDVTMSDLINGA-ISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFN 1218 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n~~~~~~~Al~~a-G--~~~~~v~~~dl~~~~-~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~ 1218 (1414)
.++||+||..+.+. -+.+.+.|++. | .++.+++.++..... ..+..+|+|||.||....+... +
T Consensus 4 ~~~~iL~ID~~DSf-t~nl~~~l~~~~g~~~~v~vv~~d~~~~~~~~~l~~~D~VVIspGPG~p~~~~-----------~ 71 (742)
T TIGR01823 4 QRLHVLFIDSYDSF-TYNVVRLLEQQTDISVHVTTVHSDTFQDQLLELLPLFDAIVVGPGPGNPNNAQ-----------D 71 (742)
T ss_pred CCceEEEEeCCcch-HHHHHHHHHHhcCCCcEEEEEeCCCCchhhhhhhcCCCEEEECCCCCCccchh-----------h
Confidence 57899999775444 34556677775 4 445666644332111 2456899999999885332111 1
Q ss_pred chHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeE-EEEEccCCCccc
Q 000572 1219 QPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFS-SVTIEDSPAIML 1297 (1414)
Q Consensus 1219 ~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v-~v~i~~~~s~~l 1297 (1414)
.++...+.+..+..++|+||||.|+|+|+.. +. |. +.++....+ .++ .++. +...+|
T Consensus 72 ~~i~~~i~~~~~~~~iPvLGIClG~QlLa~a--~G---G~-------------v~~~~~~~h--G~~~~v~~--~~~~lf 129 (742)
T TIGR01823 72 MGIISELWELANLDEVPVLGICLGFQSLCLA--QG---AD-------------ISRLPTPKH--GQVYEMHT--NDAAIF 129 (742)
T ss_pred hHHHHHHHHhcccCCCcEEEEchhhHHHHhh--cC---CE-------------EEECCCCCc--CeEEEEEE--CCcccc
Confidence 1222222222112369999999999999985 22 21 112221111 111 2332 345578
Q ss_pred cCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCc
Q 000572 1298 KGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPE 1377 (1414)
Q Consensus 1298 ~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPE 1377 (1414)
.++.. +.++..|+ ++.. ......+ ...+... ++++. -|.|+...+.+++|+|||||
T Consensus 130 ~gl~~--~~v~~~Hs---~~v~-~~~~~~l----~~~~~a~------------~~~~~--~i~ai~h~~~pi~GVQFHPE 185 (742)
T TIGR01823 130 CGLFS--VKSTRYHS---LYAN-PEGIDTL----LPLCLTE------------DEEGI--ILMSAQTKKKPWFGVQYHPE 185 (742)
T ss_pred CCCCC--CceeEEEE---EEcc-CCCCCcc----eEEEEEE------------cCCCC--eEEEEEEcCCceEEEEeCcc
Confidence 88853 77778898 4432 1111111 0111111 22232 38999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1378 RCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1378 r~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
..... ....+||+|+++.+
T Consensus 186 ~~~s~-----------------~g~~~Lf~nFl~~~ 204 (742)
T TIGR01823 186 SCCSE-----------------LGSGKLVSNFLKLA 204 (742)
T ss_pred cCCCC-----------------ccHHHHHHHHHHHH
Confidence 75431 12578999988764
|
This model represents the fungal clade of a para-aminobenzoate synthesis enzyme, aminodeoxychorismate synthase, which acts on chorismate in a pathway that yields PABA, a precursor of folate. |
| >PRK09065 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.9e-09 Score=119.24 Aligned_cols=160 Identities=18% Similarity=0.172 Sum_probs=96.5
Q ss_pred HHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhh
Q 000572 1164 AFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGC 1243 (1414)
Q Consensus 1164 Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~ 1243 (1414)
.|...|.+...+.+.+-. ...++++||+|||.||... +.+ ..-|. ..+++.|+++++ .++|+||||.|+
T Consensus 30 ~~~~~~~~~~~~~~~~~~-~~p~~~~~dgvvi~Gg~~~--~~d-~~~w~------~~~~~~i~~~~~-~~~PvlGIC~G~ 98 (237)
T PRK09065 30 ALGLAEQPVVVVRVFAGE-PLPAPDDFAGVIITGSWAM--VTD-RLDWS------ERTADWLRQAAA-AGMPLLGICYGH 98 (237)
T ss_pred HhccCCceEEEEeccCCC-CCCChhhcCEEEEeCCCcc--cCC-CchhH------HHHHHHHHHHHH-CCCCEEEEChhH
Confidence 455678877776644311 1125788999999999853 111 11233 234667788775 789999999999
Q ss_pred HHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEcc--CCCccccCCCCcEEEEEEeeccceEEeCCh
Q 000572 1244 QLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIED--SPAIMLKGMEGSTLGVWAAHGEGRAYFPDD 1321 (1414)
Q Consensus 1244 QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~--~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~ 1321 (1414)
|+|+.. +. |+ +.+|..+ ++-.|..+++.. ..+++|+++. ..++++..|++.-... |
T Consensus 99 Qlla~a--lG---g~-------------V~~~~~g-~e~G~~~v~~~~~~~~~~l~~~~~-~~~~v~~~H~d~v~~l--p 156 (237)
T PRK09065 99 QLLAHA--LG---GE-------------VGYNPAG-RESGTVTVELHPAAADDPLFAGLP-AQFPAHLTHLQSVLRL--P 156 (237)
T ss_pred HHHHHH--cC---Cc-------------cccCCCC-CccceEEEEEccccccChhhhcCC-ccCcEeeehhhhhhhC--C
Confidence 999985 22 22 1122111 223455666543 3567888873 4578778888542211 1
Q ss_pred hhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccc
Q 000572 1322 GVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1322 ~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~ 1381 (1414)
.+...+... +++ .|.|+.. .++++|+|||||....
T Consensus 157 --------~~~~~la~s-------------~~~---~iqa~~~-~~~i~gvQfHPE~~~~ 191 (237)
T PRK09065 157 --------PGAVVLARS-------------AQD---PHQAFRY-GPHAWGVQFHPEFTAH 191 (237)
T ss_pred --------CCCEEEEcC-------------CCC---CeeEEEe-CCCEEEEEeCCcCCHH
Confidence 122333321 222 3677776 4689999999998654
|
|
| >TIGR01368 CPSaseIIsmall carbamoyl-phosphate synthase, small subunit | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.4e-08 Score=118.35 Aligned_cols=85 Identities=25% Similarity=0.362 Sum_probs=60.7
Q ss_pred CCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCcc--CcCEEEEcCCCCchhhhhcccchhHHHhhcchH
Q 000572 1144 KPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLD--EFRGIVFVGGFSYADVLDSAKGWSASIRFNQPL 1221 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~--~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l 1221 (1414)
+++|+|+.+ |+- +.+.++|++.|+++.+++.+. ....+. .+|+|+|+||.. |... ....
T Consensus 173 ~~~i~viD~-G~k--~ni~~~L~~~G~~v~vvp~~~---~~~~i~~~~pDGIiLSgGPg--dp~~-----------~~~~ 233 (358)
T TIGR01368 173 KKRVVVIDF-GVK--QNILRRLVKRGCEVTVVPYDT---DAEEIKKYNPDGIFLSNGPG--DPAA-----------VEPA 233 (358)
T ss_pred ccEEEEEeC-CcH--HHHHHHHHHCCCEEEEEcCCC---CHHHHHhhCCCEEEECCCCC--CHHH-----------HHHH
Confidence 368999965 654 678999999999998886432 112232 249999999973 2211 1234
Q ss_pred HHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1222 LNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1222 ~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
.+.+++++ + ++|+||||+|+|+|+.+
T Consensus 234 i~~i~~~~-~-~~PILGIClG~QlLa~a 259 (358)
T TIGR01368 234 IETIRKLL-E-KIPIFGICLGHQLLALA 259 (358)
T ss_pred HHHHHHHH-c-CCCEEEECHHHHHHHHH
Confidence 56677777 3 89999999999999985
|
This model represents the whole of the small chain of the glutamine-dependent form (EC 6.3.5.5) of carbamoyl phosphate synthase, CPSase II. The C-terminal domain has glutamine amidotransferase activity. Note that the sequence from the mammalian urea cycle form has lost the active site Cys, resulting in an ammonia-dependent form, CPSase I (EC 6.3.4.16). CPSases of pyrimidine biosynthesis, arginine biosynthesis, and the urea cycle may be encoded by one or by several genes, depending on the species. |
| >PRK05665 amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.7e-08 Score=111.23 Aligned_cols=139 Identities=19% Similarity=0.240 Sum_probs=85.9
Q ss_pred cCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCC
Q 000572 1185 ISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAG 1264 (1414)
Q Consensus 1185 ~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~ 1264 (1414)
.++++|||+|+.||.+. +.+ ..-|+ ..+.+.|+++++ .++|+||||.|+|+|+.+ +. |+
T Consensus 53 ~~~~~~dgiiitGs~~~--v~~-~~pwi------~~l~~~i~~~~~-~~~PilGIC~GhQlla~A--lG---G~------ 111 (240)
T PRK05665 53 ADDEKFDAYLVTGSKAD--SFG-TDPWI------QTLKTYLLKLYE-RGDKLLGVCFGHQLLALL--LG---GK------ 111 (240)
T ss_pred CCcccCCEEEECCCCCC--ccc-cchHH------HHHHHHHHHHHh-cCCCEEEEeHHHHHHHHH--hC---CE------
Confidence 35788999999999752 211 11243 235667888875 789999999999999985 22 22
Q ss_pred CCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCC
Q 000572 1265 GDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNP 1344 (1414)
Q Consensus 1265 ~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~ 1344 (1414)
+.+|..| ++..+..+++. ...+|+.++ ...+.++..|++--... |+ |-+.+...+
T Consensus 112 -------V~~~~~G-~e~G~~~~~~~-~~~~~~~~~-~~~~~~~~~H~D~V~~L--P~--------ga~~La~s~----- 166 (240)
T PRK05665 112 -------AERASQG-WGVGIHRYQLA-AHAPWMSPA-VTELTLLISHQDQVTAL--PE--------GATVIASSD----- 166 (240)
T ss_pred -------EEeCCCC-cccceEEEEec-CCCccccCC-CCceEEEEEcCCeeeeC--CC--------CcEEEEeCC-----
Confidence 2233222 34445555553 335677776 35678888898643222 21 223343322
Q ss_pred cccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccc
Q 000572 1345 TEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1345 ~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~ 1381 (1414)
. ..+.++.- .++++|+|||||-...
T Consensus 167 --------~---~~~q~~~~-~~~~~g~QfHPE~~~~ 191 (240)
T PRK05665 167 --------F---CPFAAYHI-GDQVLCFQGHPEFVHD 191 (240)
T ss_pred --------C---CcEEEEEe-CCCEEEEecCCcCcHH
Confidence 1 23566653 6799999999997665
|
|
| >PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.7e-08 Score=126.65 Aligned_cols=187 Identities=14% Similarity=0.082 Sum_probs=107.8
Q ss_pred EEEEecCCCcCHHHHHHHHHHcCCc-eEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHH
Q 000572 1147 VAVIREEGSNGDREMSAAFYAAGFE-PWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQF 1225 (1414)
Q Consensus 1147 VaIl~~~G~n~~~~~~~Al~~aG~~-~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i 1225 (1414)
|.||..+++.. +.+.+.|++.|.+ +.++..++..........+|+|||.||....+..+ ...+.+
T Consensus 2 il~idn~dsft-~nl~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~d~vIlsgGP~~p~~~~-------------~~~~li 67 (534)
T PRK14607 2 IILIDNYDSFT-YNIYQYIGELGPEEIEVVRNDEITIEEIEALNPSHIVISPGPGRPEEAG-------------ISVEVI 67 (534)
T ss_pred EEEEECchhHH-HHHHHHHHHcCCCeEEEECCCCCCHHHHHhcCCCEEEECCCCCChhhCC-------------ccHHHH
Confidence 77887776663 4568899999996 55554333211111123579999999996433221 112344
Q ss_pred HHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEE
Q 000572 1226 QEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTL 1305 (1414)
Q Consensus 1226 ~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~ 1305 (1414)
+. +. .++|+||||.|+|+|+.. +. +.. .++....+ -.+..+.. +.+.+|+++.. .+
T Consensus 68 ~~-~~-~~~PvLGIClG~QlLa~a--~G---g~V-------------~~~~~~~~-G~~~~v~~--~~~~lf~~~~~-~~ 123 (534)
T PRK14607 68 RH-FS-GKVPILGVCLGHQAIGYA--FG---GKI-------------VHAKRILH-GKTSPIDH--NGKGLFRGIPN-PT 123 (534)
T ss_pred HH-hh-cCCCEEEEcHHHHHHHHH--cC---CeE-------------ecCCcccc-CCceeEEE--CCCcchhcCCC-Cc
Confidence 44 33 689999999999999985 21 111 01100000 00112222 34557888743 46
Q ss_pred EEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccccccC
Q 000572 1306 GVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQY 1385 (1414)
Q Consensus 1306 ~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~ 1385 (1414)
.++..|+++--... + ..+...+.+. ++| .|.|+..++.+++|+|||||+...
T Consensus 124 ~v~~~Hs~~v~~~~-------l-p~~~~vlA~s-------------~d~---~i~a~~~~~~pi~GvQFHPE~~~t---- 175 (534)
T PRK14607 124 VATRYHSLVVEEAS-------L-PECLEVTAKS-------------DDG---EIMGIRHKEHPIFGVQFHPESILT---- 175 (534)
T ss_pred EEeeccchheeccc-------C-CCCeEEEEEc-------------CCC---CEEEEEECCCCEEEEEeCCCCCCC----
Confidence 77888985421011 1 1133334332 223 389998877789999999997422
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHhh
Q 000572 1386 PWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1386 ~~~p~~~~~~~~~~spw~~~F~na~~~~ 1413 (1414)
..+.+||+|+...+
T Consensus 176 --------------~~g~~i~~nFl~~~ 189 (534)
T PRK14607 176 --------------EEGKRILKNFLNYQ 189 (534)
T ss_pred --------------hhHHHHHHHHHHHh
Confidence 13667888887765
|
|
| >PRK12838 carbamoyl phosphate synthase small subunit; Reviewed | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.3e-08 Score=118.33 Aligned_cols=85 Identities=25% Similarity=0.314 Sum_probs=61.5
Q ss_pred CCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCc--cCcCEEEEcCCCCchhhhhcccchhHHHhhcchH
Q 000572 1144 KPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISL--DEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPL 1221 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l--~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l 1221 (1414)
.++|+|+.+ |.. +.+.++|++.|+++.+++.+.. ...+ ..+|+|+|+||.. |.-+ ....
T Consensus 167 ~~~V~viD~-G~k--~ni~~~L~~~G~~v~vvp~~~~---~~~i~~~~~DGIiLsgGPg--dp~~-----------~~~~ 227 (354)
T PRK12838 167 GKHVALIDF-GYK--KSILRSLSKRGCKVTVLPYDTS---LEEIKNLNPDGIVLSNGPG--DPKE-----------LQPY 227 (354)
T ss_pred CCEEEEECC-CHH--HHHHHHHHHCCCeEEEEECCCC---HHHHhhcCCCEEEEcCCCC--ChHH-----------hHHH
Confidence 468999965 654 7788999999999999974421 1122 2689999999984 3211 1123
Q ss_pred HHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1222 LNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1222 ~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
.+.+++++. . +|+||||+|+|+|+.+
T Consensus 228 ~~~i~~~~~-~-~PvlGIClG~QlLa~a 253 (354)
T PRK12838 228 LPEIKKLIS-S-YPILGICLGHQLIALA 253 (354)
T ss_pred HHHHHHHhc-C-CCEEEECHHHHHHHHH
Confidence 456777774 4 9999999999999975
|
|
| >PRK07567 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=3e-08 Score=112.26 Aligned_cols=183 Identities=17% Similarity=0.211 Sum_probs=101.1
Q ss_pred EEEEecCCCcCH---HHHHHHHHHcCCceEEeecccccCc---ccCccCcCEEEEcCCCCch-hhhhcccchhHHHhhcc
Q 000572 1147 VAVIREEGSNGD---REMSAAFYAAGFEPWDVTMSDLING---AISLDEFRGIVFVGGFSYA-DVLDSAKGWSASIRFNQ 1219 (1414)
Q Consensus 1147 VaIl~~~G~n~~---~~~~~Al~~aG~~~~~v~~~dl~~~---~~~l~~~dglvlPGG~s~g-D~l~~g~~~a~~~l~~~ 1219 (1414)
|+|+.. |...+ .+....|++.|.....+....+..+ +.++++||+||++||.... |.-....-|...+. .
T Consensus 4 ililq~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dgvIi~Gg~~~~~d~~~~~~pw~~~~~--~ 80 (242)
T PRK07567 4 FLLLSP-RPEDEAADAEYAAFLRYTGLDPAELRRIRLDREPLPDLDLDDYSGVIVGGSPFNVSDPAESKSPWQRRVE--A 80 (242)
T ss_pred EEEEec-CCCcccccchHHHHHHhcCCCccceEEEecccCCCCCCCHhhccEEEEcCCCCcCCCCCCccchHHHHHH--H
Confidence 666643 33322 3567788888876333322111111 2368899999999998421 11001123443332 2
Q ss_pred hHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEcc--CCCccc
Q 000572 1220 PLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIED--SPAIML 1297 (1414)
Q Consensus 1220 ~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~--~~s~~l 1297 (1414)
.+++.++..++ .++|+||||.|+|+|+.. +. |. +.++. + .+-.|..+++.. ..+++|
T Consensus 81 ~i~~~i~~~~~-~~~PvLGIC~G~Qlla~a--~G---G~-------------V~~~~-g-~e~G~~~v~l~~~g~~~~l~ 139 (242)
T PRK07567 81 ELSGLLDEVVA-RDFPFLGACYGVGTLGHH--QG---GV-------------VDRTY-G-EPVGAVTVSLTDAGRADPLL 139 (242)
T ss_pred HHHHHHHHHHh-cCCCEEEEchhHHHHHHH--cC---CE-------------EecCC-C-CcCccEEEEECCccCCChhh
Confidence 24455555554 789999999999999986 11 22 11110 1 122344566543 346778
Q ss_pred cCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCc
Q 000572 1298 KGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPE 1377 (1414)
Q Consensus 1298 ~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPE 1377 (1414)
.++ +..+.++..|++.-... + .+...+...+ . ..+.|+.. .++++|+|||||
T Consensus 140 ~~~-~~~~~~~~~H~d~V~~l--p--------~~~~vlA~s~-------------~---~~vqa~~~-~~~~~gvQfHPE 191 (242)
T PRK07567 140 AGL-PDTFTAFVGHKEAVSAL--P--------PGAVLLATSP-------------T---CPVQMFRV-GENVYATQFHPE 191 (242)
T ss_pred cCC-CCceEEEeehhhhhhhC--C--------CCCEEEEeCC-------------C---CCEEEEEe-CCCEEEEEeCCc
Confidence 777 34577777887532111 1 1333333211 1 13677775 578999999999
Q ss_pred cccc
Q 000572 1378 RCFL 1381 (1414)
Q Consensus 1378 r~~~ 1381 (1414)
....
T Consensus 192 ~~~~ 195 (242)
T PRK07567 192 LDAD 195 (242)
T ss_pred CCHH
Confidence 8765
|
|
| >KOG1622 consensus GMP synthase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.87 E-value=8e-09 Score=119.50 Aligned_cols=177 Identities=19% Similarity=0.326 Sum_probs=112.0
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCc--cCcCEEEEcCCCC--c-hhhhhcccchhHHHhhcc
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISL--DEFRGIVFVGGFS--Y-ADVLDSAKGWSASIRFNQ 1219 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l--~~~dglvlPGG~s--~-gD~l~~g~~~a~~~l~~~ 1219 (1414)
-+|+||.+ |...-+-..+.+++.-...++++.+.-. ..+ -.+.++||.||.. | .|++. +++
T Consensus 17 d~i~iLD~-GaQY~~~I~RrvRel~v~se~~p~~t~~---~~i~~~~~rgiIiSGGP~SVya~dAP~----------~dp 82 (552)
T KOG1622|consen 17 DTILILDF-GAQYGKVIDRRVRELNVQSEILPLTTPA---KTITEYGPRGIIISGGPNSVYAEDAPS----------FDP 82 (552)
T ss_pred ceEEEEec-cchhhHHHHHHHHHHhhhhhhccCCChh---hhhhcCCceEEEEeCCCCccccCcCCC----------CCh
Confidence 37999966 5543444577888888888887754321 223 3588999999984 2 22222 232
Q ss_pred hHHHHHHHHHhCCCCeEEEEehhhHHHHhc--CccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccc
Q 000572 1220 PLLNQFQEFYKRPDTFSLGVCNGCQLMALL--GWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIML 1297 (1414)
Q Consensus 1220 ~l~~~i~~f~~~~~~piLGIC~G~QlL~~l--gllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l 1297 (1414)
+++ .-+.|+||||-|||+|+++ |.+- + .+.+ +.| -.+++++ ..+.+|
T Consensus 83 -------~if-~~~vpvLGICYGmQ~i~~~~Gg~V~-------~---------~~~R-E~G-----~~eI~v~-~~~~lF 131 (552)
T KOG1622|consen 83 -------AIF-ELGVPVLGICYGMQLINKLNGGTVV-------K---------GMVR-EDG-----EDEIEVD-DSVDLF 131 (552)
T ss_pred -------hHh-ccCCcceeehhHHHHHHHHhCCccc-------c---------cccc-CCC-----CceEEcC-chhhhh
Confidence 455 3789999999999999985 2222 1 1111 122 2267774 345578
Q ss_pred cCCC-CcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCC
Q 000572 1298 KGME-GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHP 1376 (1414)
Q Consensus 1298 ~g~~-g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HP 1376 (1414)
+++. .....+|.+||.- +.++.+.=. +.++.. ++ .+|||+++.-|++|+||||
T Consensus 132 ~~~~~~~~~~VlltHgds---------l~~v~~g~k-v~a~s~--------------n~--~va~i~~e~kkiyglqfhp 185 (552)
T KOG1622|consen 132 SGLHKTEFMTVLLTHGDS---------LSKVPEGFK-VVAFSG--------------NK--PVAGILNELKKIYGLQFHP 185 (552)
T ss_pred hhhcccceeeeeeccccc---------hhhccccce-eEEeec--------------Cc--ceeeehhhhhhhhcCCCCC
Confidence 8884 4456799999931 122222111 222221 11 3899999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCChhHHHHHHHH
Q 000572 1377 ERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAR 1410 (1414)
Q Consensus 1377 Er~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~ 1410 (1414)
|-... -+++.|++|+.
T Consensus 186 EV~~t------------------~~g~~ll~nFl 201 (552)
T KOG1622|consen 186 EVTLT------------------PNGKELLKNFL 201 (552)
T ss_pred ccccc------------------CchhHHHHHHH
Confidence 85433 27888888876
|
|
| >CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=5.1e-08 Score=116.06 Aligned_cols=89 Identities=18% Similarity=0.212 Sum_probs=62.4
Q ss_pred CCCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHH
Q 000572 1143 SKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~ 1222 (1414)
.++||+||.+ |.- +.+.+.|++.|+++.+++.+.-. ......++|+|+|+||...+... ..+.
T Consensus 191 ~~~~I~viD~-g~k--~ni~~~L~~~G~~v~vvp~~~~~-~~i~~~~~dgIilSgGPg~p~~~-------------~~~i 253 (382)
T CHL00197 191 YQLKIIVIDF-GVK--YNILRRLKSFGCSITVVPATSPY-QDILSYQPDGILLSNGPGDPSAI-------------HYGI 253 (382)
T ss_pred CCCEEEEEEC-CcH--HHHHHHHHHCCCeEEEEcCCCCH-HHHhccCCCEEEEcCCCCChhHH-------------HHHH
Confidence 3579999977 543 66889999999999888643111 11112268999999997432211 1245
Q ss_pred HHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1223 ~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
+.+++++. .++|+||||+|+|+|+.+
T Consensus 254 ~~i~~~~~-~~~PilGIClGhQlLa~a 279 (382)
T CHL00197 254 KTVKKLLK-YNIPIFGICMGHQILSLA 279 (382)
T ss_pred HHHHHHHh-CCCCEEEEcHHHHHHHHH
Confidence 56777774 689999999999999985
|
|
| >KOG0237 consensus Glycinamide ribonucleotide synthetase (GARS)/Aminoimidazole ribonucleotide synthetase (AIRS) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.9e-08 Score=116.00 Aligned_cols=229 Identities=21% Similarity=0.219 Sum_probs=149.1
Q ss_pred HHHHHHHHHHhhchhccCccccccccccccccccc-CCCCcHHHHHHHHHHHHHHHHHhCCcccccccccccccccCCce
Q 000572 824 AMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAA-KLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEV 902 (1414)
Q Consensus 824 ~ga~~AV~ealsdlaa~Ga~Pl~~v~ls~n~~~p~-~~~~e~~~l~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~ 902 (1414)
..|+--|+-+++||++.||+|+..++. | .+ +++ -.--.++++|+.+.|++.|++++||.|+--.....+++
T Consensus 513 tvG~DlvAm~vNDii~~gAePl~FLDY---f--a~gkLd--~~va~~~v~gia~gC~qa~CaLvGGETaEMP~~Y~~g~- 584 (788)
T KOG0237|consen 513 TVGIDLVAMNVNDIIVQGAEPLFFLDY---F--ATGKLD--VSVAEQVVKGIAEGCRQAGCALVGGETAEMPGMYAPGE- 584 (788)
T ss_pred ccceeeeeeehhhHhhcCCcceeehhh---h--hhcccc--hHHHHHHHHHHHHHHhhccceeeccccccCCCCCCCCc-
Confidence 357778899999999999999764432 1 22 221 12223589999999999999999999962111000111
Q ss_pred eecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcC-CCccccchHHHHHHhhh----cCCCCCCCCChHHH----
Q 000572 903 VKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLA-KGKRRLGGSALAQVFDQ----VGNESPDLEDVPYL---- 973 (1414)
Q Consensus 903 v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg-~~~~~LGGS~la~~~~~----~~~~~p~v~d~~~l---- 973 (1414)
--+.-+++|.++......-.+--.+|| . ++.|. .+-..-|-|..-.+... ..+.+|.- +-..+
T Consensus 585 ----yDlaG~Avga~e~~~iLp~~~ei~~GD-V--llGL~SsGvHSNGfSLvrkil~~~~l~~~~~~P~~-~~~tlGd~L 656 (788)
T KOG0237|consen 585 ----YDLAGFAVGAVERTDILPKLNEIVAGD-V--LLGLPSSGVHSNGFSLVRKILARSGLSYKDPLPWD-SSKTLGDEL 656 (788)
T ss_pred ----cccccceEeeeeccCcCCCccccccCc-E--EEeccccccccCcHHHHHHHHHhcCCccCCCCCCC-cccchhhhh
Confidence 013336777777543222223235797 3 44342 33444455544343221 23344432 11111
Q ss_pred ----HHHHHHHHHHHhccCceEEEeCCCCchHHHHHHHHhcCCeEEEEEeCCC---------------CCchHHHhcccc
Q 000572 974 ----KRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSE---------------GNSLFQTLFAEE 1034 (1414)
Q Consensus 974 ----k~~~~~v~~l~~~g~v~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~~---------------~~~~~~~LFsE~ 1034 (1414)
|-..+.+..++++|.|.++--|+.|||.-.+-.|.- +++|+.||.+.- +.+.+..-|+-.
T Consensus 657 L~pTkiYvk~ll~~i~~g~vkg~AHITGGGl~ENipRvlp-~~l~~~id~~twe~p~vF~Wl~~aG~v~~~em~RTfN~G 735 (788)
T KOG0237|consen 657 LAPTKIYVKQLLPLIRKGGVKGLAHITGGGLTENIPRVLP-DHLGAVIDADTWELPPVFKWLQQAGNVPDSEMARTFNCG 735 (788)
T ss_pred ccccEEehhhhHHHHHhcccceeeeecCCCccccchhhcc-cccceEEecccccCcHHHHHHHHcCCCCHHHHHHHhccc
Confidence 111134455788999999999999999999999855 899999998752 122234457766
Q ss_pred cceEEEEecCCHHHHHHHHHHcCCCEEEEEEEeCC
Q 000572 1035 LGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSS 1069 (1414)
Q Consensus 1035 ~G~vl~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~ 1069 (1414)
-|.|+.|+|++++++.+.+++++-.+++||+|.+.
T Consensus 736 iGmVlvVs~e~ve~v~kel~~~~e~~~~iG~vv~r 770 (788)
T KOG0237|consen 736 IGMVLVVSPENVERVLKELTNHGEEAYRIGEVVNR 770 (788)
T ss_pred cceEEEEcHHHHHHHHHHHhhCCeEEEEEEeEeec
Confidence 67899999999999999999999999999999864
|
|
| >PLN02771 carbamoyl-phosphate synthase (glutamine-hydrolyzing) | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.7e-08 Score=116.58 Aligned_cols=86 Identities=16% Similarity=0.128 Sum_probs=60.2
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~ 1224 (1414)
++|+++.+ | +-+.+.+.|.+.|+++.+++.+... ....-.++|||+|.||.. |.-. .+...+.
T Consensus 241 ~~IvviD~-G--~K~nIlr~L~~~G~~v~VvP~~~~~-~ei~~~~pDGIiLSnGPG--DP~~-----------~~~~ie~ 303 (415)
T PLN02771 241 YHVIAYDF-G--IKHNILRRLASYGCKITVVPSTWPA-SEALKMKPDGVLFSNGPG--DPSA-----------VPYAVET 303 (415)
T ss_pred CEEEEECC-C--hHHHHHHHHHHcCCeEEEECCCCCH-HHHhhcCCCEEEEcCCCC--ChhH-----------hhHHHHH
Confidence 68888843 4 4688899999999999988643211 111113589999999973 3322 1224556
Q ss_pred HHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1225 FQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1225 i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
+++++ .++|+||||+|+|+|+.+
T Consensus 304 ik~l~--~~iPIlGICLGhQlLa~A 326 (415)
T PLN02771 304 VKELL--GKVPVFGICMGHQLLGQA 326 (415)
T ss_pred HHHHH--hCCCEEEEcHHHHHHHHh
Confidence 67766 379999999999999975
|
|
| >KOG3210 consensus Imidazoleglycerol-phosphate synthase subunit H-like [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.9e-09 Score=105.01 Aligned_cols=194 Identities=17% Similarity=0.210 Sum_probs=113.5
Q ss_pred EEEEEecCCCcCHHHHHHHHHHcCCce------EEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcc
Q 000572 1146 KVAVIREEGSNGDREMSAAFYAAGFEP------WDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQ 1219 (1414)
Q Consensus 1146 kVaIl~~~G~n~~~~~~~Al~~aG~~~------~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~ 1219 (1414)
.|+||..+|..-++ .+-++++-.+- .+.++ ..+.++.++|+||||||.|. .+. .+....
T Consensus 13 VIGVLALQGAFiEH--~N~~~~c~~en~y~Ik~~~~tV----KT~~D~aq~DaLIIPGGEST--~ms-------lia~~t 77 (226)
T KOG3210|consen 13 VIGVLALQGAFIEH--VNHVEKCIVENRYEIKLSVMTV----KTKNDLAQCDALIIPGGEST--AMS-------LIAERT 77 (226)
T ss_pred EEeeeehhhHHHHH--HHHHHHhhccCcceEEEEEEee----cCHHHHhhCCEEEecCCchh--HHH-------HHHhhh
Confidence 58999999987444 44455432222 11121 14568999999999999985 232 233445
Q ss_pred hHHHHHHHHHhCCCCeEEEEehhhHHHHhc----CccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCc
Q 000572 1220 PLLNQFQEFYKRPDTFSLGVCNGCQLMALL----GWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAI 1295 (1414)
Q Consensus 1220 ~l~~~i~~f~~~~~~piLGIC~G~QlL~~l----gllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~ 1295 (1414)
++++.+.+|+....+++.|.|.||.+|++- ..+++. +..-...+.+|+.||.--.|...-.-+ -
T Consensus 78 gL~d~L~~fVhn~~k~~WGTCAGmI~LS~ql~nek~~~~t---------L~~lkv~V~RN~FG~QaqSFT~~~~~s---n 145 (226)
T KOG3210|consen 78 GLYDDLYAFVHNPSKVTWGTCAGMIYLSQQLSNEKKLVKT---------LNLLKVKVKRNAFGRQAQSFTRICDFS---N 145 (226)
T ss_pred hhHHHHHHHhcCCCccceeechhhhhhhhhhcCCcchhhh---------hhheeEEEeeccccchhhhheehhccc---c
Confidence 699999999986669999999999999862 111110 011123468999888755554332111 1
Q ss_pred cccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccC
Q 000572 1296 MLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPH 1375 (1414)
Q Consensus 1296 ~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~H 1375 (1414)
|.-+. .-+|. -+++ ..+.+.+...-.|...|. ..-||.. -|.+..- +|++|+..||
T Consensus 146 fi~~~--~~FpA--------TFIR-APVie~ILD~I~V~~l~~-----------~~~nG~~-~iVAa~Q-~~~iL~TSFH 201 (226)
T KOG3210|consen 146 FIPHC--NDFPA--------TFIR-APVIEEILDPIHVQVLYK-----------LDGNGQE-LIVAAKQ-KNNILATSFH 201 (226)
T ss_pred cccCc--ccCch--------hhee-chhHHHhcCchhheEEEE-----------ecCCCcE-EEEEEec-cCCEeeeecC
Confidence 11111 12442 1222 234444443333444553 2345653 4555553 6999999999
Q ss_pred Cccc-cccccCCCCCC
Q 000572 1376 PERC-FLMWQYPWYPK 1390 (1414)
Q Consensus 1376 PEr~-~~~~q~~~~p~ 1390 (1414)
||.. .+..-|.||=+
T Consensus 202 PELa~~D~R~HdW~ir 217 (226)
T KOG3210|consen 202 PELAENDIRFHDWFIR 217 (226)
T ss_pred hhhhcccchHHHHHHH
Confidence 9998 56555666543
|
|
| >cd03130 GATase1_CobB Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase | Back alignment and domain information |
|---|
Probab=98.66 E-value=6.1e-08 Score=106.66 Aligned_cols=90 Identities=21% Similarity=0.220 Sum_probs=64.1
Q ss_pred EEEEecCCCc-CHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHH
Q 000572 1147 VAVIREEGSN-GDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQF 1225 (1414)
Q Consensus 1147 VaIl~~~G~n-~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i 1225 (1414)
|||-++.-++ .-.|...+|+++|++++.++.. ....+.++|+||||||++. ..++ .+..+.++.+.|
T Consensus 1 iaia~d~aF~f~y~e~~~~l~~~G~~v~~~s~~----~~~~l~~~D~lilPGG~~~-~~~~-------~L~~~~~~~~~i 68 (198)
T cd03130 1 IAVARDEAFNFYYPENLELLEAAGAELVPFSPL----KDEELPDADGLYLGGGYPE-LFAE-------ELSANQSMRESI 68 (198)
T ss_pred CEEEecCccccccHHHHHHHHHCCCEEEEECCC----CCCCCCCCCEEEECCCchH-HHHH-------HHHhhHHHHHHH
Confidence 3444443333 2236788999999999887631 1234566999999998753 1121 233456789999
Q ss_pred HHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1226 QEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1226 ~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
++|++ +|+|++|||.|||||.+.
T Consensus 69 ~~~~~-~g~pilgICgG~qlL~~~ 91 (198)
T cd03130 69 RAFAE-SGGPIYAECGGLMYLGES 91 (198)
T ss_pred HHHHH-cCCCEEEEcccHHHHHHH
Confidence 99995 899999999999999984
|
Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase. CobB plays a role in cobalamin biosythesis catalyzing the conversion of cobyrinic acid to cobyrinic acid a,c-diamide. CobB belongs to the triad family of amidotransferases. Two of the three residues of the catalytic triad that are involved in glutamine binding, hydrolysis and transfer of the resulting ammonia to the acceptor substrate in other triad aminodotransferases are conserved in CobB. |
| >KOG3939 consensus Selenophosphate synthetase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.9e-07 Score=97.09 Aligned_cols=242 Identities=14% Similarity=0.139 Sum_probs=145.2
Q ss_pred CCCCCcHHHHhhcccccccchhccCCCceeEEEeEE-EEecCCCCCCCCCCCCCCCCCCCCCCCChHH-HHHHHHHHHHH
Q 000572 405 PCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAG-YCVGNLNVEGSYAPWEDPSFTYPSNLASPLQ-ILIDASNGASD 482 (1414)
Q Consensus 405 p~~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~-l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~-i~~~~~~G~~~ 482 (1414)
|--.|||-.+..+.+..+||++|| |-.---.+.- +.++. .+.+ ..++ .+--+.+|+.|
T Consensus 24 p~vddpy~mgriacanvlsdlyam--gvtecdnmlmll~vs~-~~~e-----------------kerd~v~pl~~~gfkd 83 (312)
T KOG3939|consen 24 PLVDDPYMMGRIACANVLSDLYAM--GVTECDNMLMLLSVST-SMSE-----------------KERDVVIPLIIQGFKD 83 (312)
T ss_pred eccCChHHhhHHHHHHHHHHHHHh--cccccccchhhhhhhh-hhhh-----------------hhhchhhHHHHHHhHH
Confidence 555699999999999999999999 5443211111 11110 0000 0122 23347899999
Q ss_pred HHhHhCCeeeeeeeEEeccccCCCCccccCCceEEEEEEEe-ee-Ccc-cccCCCCCCCEEEEEccCCCcccccHH-HHH
Q 000572 483 YGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQ-ID-HNH-ISKGEPDIGMLVVKIGGPAYRIGMGGG-AAS 558 (1414)
Q Consensus 483 ~~n~~GvplvgG~t~s~~~~~~~g~~~~~~~Plv~~~~vG~-v~-~~~-i~r~~a~~GD~Ivv~G~~~g~~GlgGa-a~s 558 (1414)
.+.+.|.|+.||.|. ..|....+++.. |- +.. +..+.+.|||.+++++. +|--.+ .+.
T Consensus 84 aa~e~gt~v~ggqtv--------------~npw~~igGVatsVcq~ne~i~pdnAvpGdvlvLTkp----lg~qvAv~~h 145 (312)
T KOG3939|consen 84 AAEEAGTPVTGGQTV--------------INPWCIIGGVATSVCQPNEIIMPDNAVPGDVLVLTKP----LGGQVAVNAH 145 (312)
T ss_pred HHHhcCCceecCeee--------------cCcceeeccccccccCccceecccCCCCcceEEEecc----CCceeehHHH
Confidence 999999999999983 356665554432 22 233 45667999999999886 222222 222
Q ss_pred HhhhCCCCCccccccccCCCHHHHHHHHHHHHHHH-------HhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEe
Q 000572 559 SMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACI-------EMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDI 629 (1414)
Q Consensus 559 s~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~-------~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl 629 (1414)
.+..... +.-..-.+-..+...++..+++..... -+...-.+|+..|++.-||.+...-++. ..++.+..
T Consensus 146 ~wi~~~~-ek~~~~~l~vs~~die~ay~~a~~~M~~Lnr~aA~lmhkynaHaaTDItGFgllGHaqnLa~qqk~~v~f~i 224 (312)
T KOG3939|consen 146 QWIDNQP-EKWNKLKLEVSDEDIEKAYEEAMKSMARLNRNAAGLMHKYNAHAATDITGFGLLGHAQNLAKQQKNEVSFQI 224 (312)
T ss_pred HHHhcCc-ceeeeeeeeecHHHHHHHHHHHHhhhhhhchhhhhhhhhccccccccccccchhhhHHHHHHHhhccceeee
Confidence 3332111 111111112233444544433332211 1223345899999999999999988888 67888888
Q ss_pred CCCCCCCCCccHHHHhc-----------ccccceeEEEEcCCCHHHHHHHHHH----cCCCeEEEEEEEcCCe
Q 000572 630 RAIIVGDHTLSVLEIWG-----------AEYQEQDAVLVKPESRDLLQSICER----ERVSMAVIGTISGEGR 687 (1414)
Q Consensus 630 ~~iP~~~~~l~p~ei~~-----------sEsqer~ll~V~pe~~~~l~~i~~~----~~~~~~vIG~vt~~~~ 687 (1414)
.++|+-.. |....-.+ .|.-+.++++.|.++.++|.+-.+. +| .+.+||.|+.+..
T Consensus 225 ~~LPiI~k-m~~vska~G~~f~l~qGts~ETsGGlLIclP~eqaakfcaei~s~k~geg-qAWIIGiVekgn~ 295 (312)
T KOG3939|consen 225 HKLPIIAK-MAEVSKACGNMFKLRQGTSAETSGGLLICLPREQAAKFCAEIKSPKNGEG-QAWIIGIVEKGNS 295 (312)
T ss_pred ccChhhhh-HHHHHHhccccceeccCCCccCCCceEEEccHHHHHHHHHHhcCCccCCC-ceEEEEEEecCCc
Confidence 99997542 22221111 1333448899998888887555543 23 5999999997643
|
|
| >KOG1907 consensus Phosphoribosylformylglycinamidine synthase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.1e-06 Score=108.37 Aligned_cols=267 Identities=15% Similarity=0.136 Sum_probs=158.6
Q ss_pred CCCcHHHHhhcccccccchhccCCCceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhH
Q 000572 407 AVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNK 486 (1414)
Q Consensus 407 ~idP~~gA~t~vgg~irDiaAmGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~ 486 (1414)
-+||-.+|.-+|+++|.++.+. +-.++-+. .+.+ +..|-. ..|+. -.-|-++++.+.....+
T Consensus 723 Lida~a~ARm~VaE~l~NLv~a----~i~sL~dv------K~Sg-NWM~aa---k~~GE----GarlydAv~aL~~~L~e 784 (1320)
T KOG1907|consen 723 LIDAAASARMCVAEALMNLVAA----KITSLKDV------KLSG-NWMWAA---KHPGE----GARLYDAVQALCLGLCE 784 (1320)
T ss_pred hhCHHHHhHHHHHHHHHHhHhh----cccchhhe------eecc-ceeecc---cCCCc----chHHHHHHHHHHHHHHH
Confidence 3688889999999999998875 11111111 1222 223321 12221 11234555555555559
Q ss_pred hCCeeeeeeeEEecccc-CCCCccccCCceE-EEEEEEeeeCc-ccccCC---CCCCCE---EEEEccCCCcccccHHHH
Q 000572 487 FGEPLIQGYTRTFGMRL-PSGQRREWLKPIM-FSGGIGQIDHN-HISKGE---PDIGML---VVKIGGPAYRIGMGGGAA 557 (1414)
Q Consensus 487 ~GvplvgG~t~s~~~~~-~~g~~~~~~~Plv-~~~~vG~v~~~-~i~r~~---a~~GD~---Ivv~G~~~g~~GlgGaa~ 557 (1414)
+||.|-||.. |+.... .+|+. ...|.. +.++.--++.- +..... ..+|+. |++-=. .+.--+||+++
T Consensus 785 LgiAIdgGKD-SlSMa~k~~ge~--VkaPgtLvIsayapc~dv~k~vtP~Lk~~~~gs~~~Ll~i~l~-~~k~rLGgSaL 860 (1320)
T KOG1907|consen 785 LGIAIDGGKD-SLSMAMKWDGEV--VKAPGTLVISAYAPCPDVTKTVTPDLKANVDGSKTSLLWIDLA-NSKMRLGGSAL 860 (1320)
T ss_pred hceeecCCcc-chhhheeeCCeE--EecCceEEEEeeccCCCcceeecccccCCCCCCceEEEEEEcc-ccccccchHHH
Confidence 9999999987 332221 13332 233432 22433333332 122211 244554 333211 22344778875
Q ss_pred HHhhhCCCCCccccccccCCCHHHHHHHHHHHHHHHHhhccCCceEEEcCCCCcHHHHHHHHhc--CCeEEEEeCCCCCC
Q 000572 558 SSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVG 635 (1414)
Q Consensus 558 ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~~~~~l~~~~~i~a~~DigaGGL~~aL~Ela~--~~Ga~Idl~~iP~~ 635 (1414)
+...... ..+.+.+ .|-..-++ ++....++...++|.|-||+|.|||..++.|||. .+|++||++.-
T Consensus 861 aQvy~Qi---G~d~Pdl--~~~~~lk~---~f~~vqqL~~~~ii~AgHD~SDGGLlvt~lEMAfag~~gi~idl~~~--- 929 (1320)
T KOG1907|consen 861 AQVYSQI---GDDCPDL--DNFDELKK---FFSVVQQLLNEGIILAGHDISDGGLLVTLLEMAFAGNVGIEIDLDSP--- 929 (1320)
T ss_pred HHHHHHh---CCCCCCc--cchHHHHH---HHHHHHHHHhcCceeecccccCCchhHHHHHHHhhcccceEEecCCc---
Confidence 5332110 0122222 12222222 3455555667899999999999999999999999 79999999852
Q ss_pred CCCccHHHHhcccccceeEEEEcCCCHHHHHHHHHHcCCCeEEEEEEE----cCCeEEEEeCcccccccCCCCCCCCCeE
Q 000572 636 DHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTIS----GEGRVVLVDSAAVQKCQSSGLPPPPPAV 711 (1414)
Q Consensus 636 ~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt----~~~~l~l~~~~~~~~~~~~~~~~~~~~~ 711 (1414)
..++.+.+++|+|-- -.++-|...+++++++++++.|+++..||++. .+.++.+.. ++..++
T Consensus 930 ~~~~~~~~~LF~EEl-G~v~evs~~dl~~v~~~~~~~gv~~~~ig~~~~~~g~~~~i~~~~-------------~g~~~~ 995 (1320)
T KOG1907|consen 930 NQNIKLFDILFAEEL-GAVLEVSDTDLEKVLEIFSEAGVKCEYIGKASAVFGQDAHIKISV-------------NGHLIL 995 (1320)
T ss_pred cccccHHHHHHHHhh-CeEEEeccccHHHHHHHHHhcCCcceeeeeeccccCCCceEEEec-------------CCeEEe
Confidence 234678888998732 36888889999999999999999999999762 344555544 467777
Q ss_pred EcchhhhhC
Q 000572 712 DLELERVLG 720 (1414)
Q Consensus 712 dl~~~~l~~ 720 (1414)
+-+..+|.+
T Consensus 996 ~~~~s~L~~ 1004 (1320)
T KOG1907|consen 996 NEKLSDLRE 1004 (1320)
T ss_pred cchHHHHHH
Confidence 777777753
|
|
| >PRK00784 cobyric acid synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.1e-07 Score=115.98 Aligned_cols=90 Identities=17% Similarity=0.135 Sum_probs=73.7
Q ss_pred CCEEEEEecCCCcCHHHHHHHHHH-cCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHH
Q 000572 1144 KPKVAVIREEGSNGDREMSAAFYA-AGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~~~~~~Al~~-aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~ 1222 (1414)
+.||+|++++-..|. +-..+|++ +|++++.++. ...+.++|+|+||||+++...+. ++.+.++.
T Consensus 251 ~~~i~v~~~~~a~~f-~nl~~l~~~~g~~v~~~s~------~~~l~~~d~lilpGg~~~~~~~~--------~~~~~~l~ 315 (488)
T PRK00784 251 ALRIAVIRLPRISNF-TDFDPLRAEPGVDVRYVRP------GEPLPDADLVILPGSKNTIADLA--------WLRESGWD 315 (488)
T ss_pred ceEEEEEeCCCcCCc-cChHHHhhcCCCeEEEECC------ccccccCCEEEECCccchHHHHH--------HHHHcCHH
Confidence 469999996766665 44678887 9999888862 23577899999999998766554 56677899
Q ss_pred HHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1223 ~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
+.|+++++ .|+|++|||.|||+|.+.
T Consensus 316 ~~i~~~~~-~g~pilg~C~G~~~L~~~ 341 (488)
T PRK00784 316 EAIRAHAR-RGGPVLGICGGYQMLGRR 341 (488)
T ss_pred HHHHHHHH-cCCeEEEECHHHHHHhhh
Confidence 99999995 899999999999999985
|
|
| >PLN02889 oxo-acid-lyase/anthranilate synthase | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.8e-06 Score=109.08 Aligned_cols=93 Identities=20% Similarity=0.208 Sum_probs=61.3
Q ss_pred CCCEEEEEecCCCcCHHHHHHHHHHc-CCceEEeecccccCccc-----CccCcCEEEEcCCCCchhhhhcccchhHHHh
Q 000572 1143 SKPKVAVIREEGSNGDREMSAAFYAA-GFEPWDVTMSDLINGAI-----SLDEFRGIVFVGGFSYADVLDSAKGWSASIR 1216 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n~~~~~~~Al~~a-G~~~~~v~~~dl~~~~~-----~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l 1216 (1414)
..|+|++|..|.+.. +.+.+.|++. |.++++|+-.+..-... .+..+|+|||.||...++.... .+
T Consensus 80 ~~~~iLlIDnyDSfT-yNL~~~L~~~~g~~~~Vv~nd~~~~~~~~~~~~~~~~~d~IVlSPGPG~P~~~~d-~G------ 151 (918)
T PLN02889 80 EFVRTLLIDNYDSYT-YNIYQELSIVNGVPPVVVRNDEWTWEEVYHYLYEEKAFDNIVISPGPGSPTCPAD-IG------ 151 (918)
T ss_pred ccceEEEEeCCCchH-HHHHHHHHHhcCCCEEEEeCCCCCHHHHHhhhhcccCCCEEEECCCCCCccchHH-HH------
Confidence 447999999888773 4467788887 99988887332211111 1357899999999965433210 00
Q ss_pred hcchHHHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1217 FNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1217 ~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
...+.|.++ .+.||||||+|+|+|+..
T Consensus 152 ---i~~~~i~~~---~~iPILGICLGhQ~i~~~ 178 (918)
T PLN02889 152 ---ICLRLLLEC---RDIPILGVCLGHQALGYV 178 (918)
T ss_pred ---HHHHHHHHh---CCCcEEEEcHHHHHHHHh
Confidence 012333332 369999999999999985
|
|
| >PF12818 Tegument_dsDNA: dsDNA viral tegument protein; InterPro: IPR024346 This entry represents the N-terminal domain of tegument proteins from double-stranded DNA herpesvirus | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.3e-05 Score=91.87 Aligned_cols=225 Identities=19% Similarity=0.225 Sum_probs=131.7
Q ss_pred CceeEEEeEEEEecCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHhHhCCeeeeeeeEEeccccCCCCccc
Q 000572 431 GSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRRE 510 (1414)
Q Consensus 431 GA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~G~~~~~n~~GvplvgG~t~s~~~~~~~g~~~~ 510 (1414)
|+.|++...++-+=. |....+ ++. ....+.....+--.+..+..|+|++||++|...... .+ ..
T Consensus 31 ~~~~~aa~~G~Y~~~---~~~~~~--------~~~--~~~~~~~~~l~aq~~~l~~~GvPv~~GF~R~i~~~~-~~--~~ 94 (282)
T PF12818_consen 31 GVSPIAAALGLYVTS---PSQVGD--------LSH--KVHRQITTALQAQARSLNASGVPVVGGFIRPIDSHL-SG--PV 94 (282)
T ss_pred CCcHhhhhceeeEec---CcccCC--------chH--HHHHHHHHHHHHHHHHHhhcCCCccCcEeEEecCcc-cc--cc
Confidence 777888777776432 221111 010 123344455666677888999999999999774221 11 11
Q ss_pred cCCceEEEEEEEeeeCcccccCCCCCCCEEEEEccCCCcccccHHHHHHhhhCCCCCccccccccCCCHHHHHHHHHHHH
Q 000572 511 WLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVR 590 (1414)
Q Consensus 511 ~~~Plv~~~~vG~v~~~~i~r~~a~~GD~Ivv~G~~~g~~GlgGaa~ss~~~~~~~~~~~~~~Vq~~~p~~e~~l~~~i~ 590 (1414)
...+++.++.++.+....+.....++||.||.+|......+..+. +-.-+..+....++++.++
T Consensus 95 ~~~~~~~~s~l~~~~~~~l~~~~~~~g~~iv~LG~F~p~~~~d~~----------------p~~y~dS~~~~~~i~~aL~ 158 (282)
T PF12818_consen 95 PLNVLTFTSILGSISQTNLNTARPRPGQYIVCLGDFEPTPGPDTP----------------PYTYRDSGLEQNKILQALQ 158 (282)
T ss_pred cCceEEEEEEEcccchhhhhccCCCCCCEEEEecCCcccCCCCCC----------------CcccccCHHHHHHHHHHHH
Confidence 234556667788887776666667899999999964222221111 1112233445556655555
Q ss_pred HHHHhhccCCce-EEEcCCCCcHHHHHHHHhcCCeEEEEeCCCCCCC--C--CccH-----HH-----HhcccccceeEE
Q 000572 591 ACIEMGETNPII-SIHDQGAGGNCNVVKEIIYPKGAEIDIRAIIVGD--H--TLSV-----LE-----IWGAEYQEQDAV 655 (1414)
Q Consensus 591 ~~~~l~~~~~i~-a~~DigaGGL~~aL~Ela~~~Ga~Idl~~iP~~~--~--~l~p-----~e-----i~~sEsqer~ll 655 (1414)
...+......|. .+.+.+..=+-..|.|++...|+.|+++++|-.- . ..++ .+ .|++=+-..+.+
T Consensus 159 ~f~~~~~~~cis~~~r~~~~~sv~~~L~aL~~~~G~~l~lS~LP~~i~~~L~~~~~~~~~~~~~~i~~~FLNv~~~~vfl 238 (282)
T PF12818_consen 159 QFYSTLESPCISGSIRPPGPASVKEHLLALCHPGGARLDLSALPQEIVSQLKRSPPENREHNEEIIKQHFLNVYCSVVFL 238 (282)
T ss_pred HHHHhcCCCcEEeecCCCCchhHHHHHHHhcCCCceEEEhhcCCHHHHHHhccCCchhHHHHHHHHHhhhhccccceEEE
Confidence 544444445554 4455444444445555555899999999999320 0 0011 11 122222222566
Q ss_pred EEcCCC-----------HHHHHHHHHHcCCCeEEEEEEEcCCe
Q 000572 656 LVKPES-----------RDLLQSICERERVSMAVIGTISGEGR 687 (1414)
Q Consensus 656 ~V~pe~-----------~~~l~~i~~~~~~~~~vIG~vt~~~~ 687 (1414)
+|+.+. ++.++.+|+.+||++.+||+++++.+
T Consensus 239 ~V~n~~~~~~~~~~~~~l~~L~~~c~~~gc~~~iLG~t~~~~G 281 (282)
T PF12818_consen 239 VVSNTPIDTNTDQGFGPLDALKRACRLCGCPVHILGRTCPEPG 281 (282)
T ss_pred EEecCCCCCcccccccHHHHHHHHHHHCCCCEEEEeeeccCCC
Confidence 665443 48899999999999999999987654
|
|
| >PRK11780 isoprenoid biosynthesis protein with amidotransferase-like domain; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=6.7e-07 Score=99.53 Aligned_cols=133 Identities=17% Similarity=0.103 Sum_probs=83.8
Q ss_pred CEEEEEec-----CCCcCHH--HHHHHHHHcCCceEEeeccc-------------cc-------------------Cccc
Q 000572 1145 PKVAVIRE-----EGSNGDR--EMSAAFYAAGFEPWDVTMSD-------------LI-------------------NGAI 1185 (1414)
Q Consensus 1145 ~kVaIl~~-----~G~n~~~--~~~~Al~~aG~~~~~v~~~d-------------l~-------------------~~~~ 1185 (1414)
+||+|+.. +|+.-.+ ....+|+++|+++..+..+. .. -...
T Consensus 2 kkVlills~~~~~dG~e~~E~~~P~~~L~~aG~~V~~aSp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v 81 (217)
T PRK11780 2 KKIAVILSGCGVYDGSEIHEAVLTLLALDRAGAEAVCFAPDIPQLHVINHLTGEEMGETRNVLVESARIARGEIKDLAEA 81 (217)
T ss_pred CEEEEEEccCCCCCCEehhHHHHHHHHHHHCCCEEEEEeCCCCccccccCccccccccccceeeehhhhhccCCCchhHC
Confidence 47999976 6776333 45789999999999986431 00 0112
Q ss_pred CccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCC
Q 000572 1186 SLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGG 1265 (1414)
Q Consensus 1186 ~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~ 1265 (1414)
+.++||+|+||||+...+.+..-..-...+..++.+.+.+++|.+ .|||+.+||+|.|+|+.... + |+.+-.. .
T Consensus 82 ~~~dyDalviPGG~g~~~~l~d~~~~~~~lr~~~~v~~lv~~f~~-~gK~vaAIChgp~iL~~~~~-~---gr~~T~~-~ 155 (217)
T PRK11780 82 DAEDFDALIVPGGFGAAKNLSNFAVKGAECTVNPDVKALVRAFHQ-AGKPIGFICIAPAMLPKILG-A---GVKLTIG-N 155 (217)
T ss_pred ChhhCCEEEECCCCchhhhhhhhcccchhcccCHHHHHHHHHHHH-CCCEEEEECHHHHHHHHHhc-c---CcEEEec-C
Confidence 356899999999986433221000000013457789999999995 99999999999999998511 3 3321000 0
Q ss_pred CCCCCeeeecCCCceEEe
Q 000572 1266 DPSQPRFVHNESGRFECR 1283 (1414)
Q Consensus 1266 ~~~~p~l~~N~s~~fe~r 1283 (1414)
+......+.|+++.|++.
T Consensus 156 ~~~~~~~~~~aGa~~vd~ 173 (217)
T PRK11780 156 DEDTAAAIEKMGGEHVDC 173 (217)
T ss_pred ChhhHHHHHHCCCEEEcC
Confidence 011223468999988765
|
|
| >COG0504 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.44 E-value=6.8e-06 Score=97.69 Aligned_cols=194 Identities=21% Similarity=0.295 Sum_probs=103.8
Q ss_pred CCEEEEEecCCCcCH--HHHHHHHHHcCC----ceEEeecc--cccCcc-cCccC-cCEEEEcCCCCchhhhhcccchhH
Q 000572 1144 KPKVAVIREEGSNGD--REMSAAFYAAGF----EPWDVTMS--DLINGA-ISLDE-FRGIVFVGGFSYADVLDSAKGWSA 1213 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~--~~~~~Al~~aG~----~~~~v~~~--dl~~~~-~~l~~-~dglvlPGG~s~gD~l~~g~~~a~ 1213 (1414)
..+||++--|=.--+ .++..||+.+|. .+.+.+++ ++.... ..+.. +|||++||||.+ ++|
T Consensus 288 ~v~IalVGKYv~l~DaY~Sv~EAL~hag~~~~~~v~i~wIdse~le~~~~~~~~~~~dgIlVPGGFG~-------RG~-- 358 (533)
T COG0504 288 EVTIALVGKYVELPDAYKSVIEALKHAGIALGVKVNIKWIDSEDLEEENAAELEKLVDGILVPGGFGY-------RGV-- 358 (533)
T ss_pred ceEEEEEECCcCchhHHHHHHHHHHhhhhhcCCceeeEEEccccccccchhhhhhcCCEEEeCCCCCc-------Cch--
Confidence 367888732221111 256778887763 44444443 333221 12333 999999999963 222
Q ss_pred HHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHh------cCccCCCCCCCccCCCCCCCCCe--eeec------CCCc
Q 000572 1214 SIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMAL------LGWIPGPQVGGVHGAGGDPSQPR--FVHN------ESGR 1279 (1414)
Q Consensus 1214 ~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~------lgllp~~~g~~~~~~~~~~~~p~--l~~N------~s~~ 1279 (1414)
++-..+++ |..+++.|.||||+|||+.+- +|+-..... ++.+....|- +... -.|
T Consensus 359 -----eGkI~Ai~-yAREn~iP~lGIClGmQ~aviE~ARnv~Gl~~AnS~----Efdp~t~~pVv~l~~eq~~~~~lGG- 427 (533)
T COG0504 359 -----EGKIAAIR-YARENNIPFLGICLGMQLAVIEFARNVLGLEGANST----EFDPDTKYPVVDLMPEQKDVVDLGG- 427 (533)
T ss_pred -----HHHHHHHH-HHHhcCCCEEEEchhHHHHHHHHHHHhcCCccCccc----ccCCCCCCceEEeccccccCCcCCc-
Confidence 22233444 444689999999999999874 344331110 1222233332 2111 111
Q ss_pred eEEeeEEEEEccCCCccccC-----CCC-cEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCC
Q 000572 1280 FECRFSSVTIEDSPAIMLKG-----MEG-STLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVN 1353 (1414)
Q Consensus 1280 fe~r~v~v~i~~~~s~~l~g-----~~g-~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPn 1353 (1414)
+.++-..++.+..| +-| ..+. -.|-+ ||.+ +++..+.|+++|.+..-. .|+
T Consensus 428 ------TmRLG~y~~~l~~gT~a~~lY~~~~v~--ERHRH-RYEv-N~~y~~~le~~Gl~~sg~-------------s~d 484 (533)
T COG0504 428 ------TMRLGAYPCRLKPGTLAAKLYGKDEIY--ERHRH-RYEV-NNDYRDQLEKAGLVFSGT-------------SPD 484 (533)
T ss_pred ------eeeccceeeecCCCcHHHHHhCCCeee--eeccc-hhhc-CHHHHHHHHhCCeEEEEE-------------cCC
Confidence 23332223333222 223 3333 46653 5777 577788899998654433 344
Q ss_pred CCcCceeEEEcCCCc-EEEEccCCcccccc
Q 000572 1354 GSPLGVAAICSPDGR-HLAMMPHPERCFLM 1382 (1414)
Q Consensus 1354 Gs~~~iagi~s~dGr-vlg~m~HPEr~~~~ 1382 (1414)
|. -+..|-=++-. .+|+|||||-..++
T Consensus 485 ~~--lvEivE~~~hpfFv~~QfHPEf~SrP 512 (533)
T COG0504 485 GG--LVEIVELPDHPFFVATQFHPEFKSRP 512 (533)
T ss_pred CC--eEEEEEcCCCceEEEEcccccccCCC
Confidence 43 24555444443 68999999998885
|
|
| >PRK01077 cobyrinic acid a,c-diamide synthase; Validated | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.7e-06 Score=106.96 Aligned_cols=92 Identities=17% Similarity=0.179 Sum_probs=70.5
Q ss_pred CCEEEEEecCCCcCHH--HHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchH
Q 000572 1144 KPKVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPL 1221 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l 1221 (1414)
+.+|||.+++ ..|.+ +-..+|++.|++++.++.. ....+.++|+|+||||++.- .+..++.+..+
T Consensus 245 ~~~iava~d~-af~f~y~e~~~~L~~~g~~~~~~~~~----~~~~l~~~D~lilpGG~~~~--------~~~~l~~~~~~ 311 (451)
T PRK01077 245 GVRIAVARDA-AFNFYYPENLELLRAAGAELVFFSPL----ADEALPDCDGLYLGGGYPEL--------FAAELAANTSM 311 (451)
T ss_pred CceEEEEecC-cccccHHHHHHHHHHCCCEEEEeCCc----CCCCCCCCCEEEeCCCchhh--------HHHHHhhCchh
Confidence 4799999999 44443 4567899999998887532 12356789999999999621 11225567788
Q ss_pred HHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1222 LNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1222 ~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
.+.|++|.+ .|+|++|||.|+|+|.+.
T Consensus 312 ~~~i~~~~~-~g~~i~aiCgG~~~L~~~ 338 (451)
T PRK01077 312 RASIRAAAA-AGKPIYAECGGLMYLGES 338 (451)
T ss_pred HHHHHHHHH-cCCCEEEEcHHHHHHHhh
Confidence 999999995 899999999999999983
|
|
| >cd03133 GATase1_ES1 Type 1 glutamine amidotransferase (GATase1)-like domain found in zebrafish ES1 | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.9e-06 Score=94.02 Aligned_cols=109 Identities=16% Similarity=0.050 Sum_probs=74.3
Q ss_pred HHHHHHHHcCCceEEeeccc--------------------------------ccCcccCccCcCEEEEcCCCCchhhh--
Q 000572 1160 EMSAAFYAAGFEPWDVTMSD--------------------------------LINGAISLDEFRGIVFVGGFSYADVL-- 1205 (1414)
Q Consensus 1160 ~~~~Al~~aG~~~~~v~~~d--------------------------------l~~~~~~l~~~dglvlPGG~s~gD~l-- 1205 (1414)
.+..+|+++|+++..+++.. +.-....+++||+|+||||++..+.+
T Consensus 21 ~p~~~L~raG~~V~~aS~~gg~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ev~~~dyDalviPGG~~~~~~l~D 100 (213)
T cd03133 21 LTLLALDRAGAEVQCFAPDIEQMHVVNHLTGEAEGESRNVLVESARIARGNIKDLAKLKAADFDALIFPGGFGAAKNLSD 100 (213)
T ss_pred HHHHHHHHCCCEEEEEeCCCCccCccccccccccccccceeeehhhhhhcCCCchHHCCHhHCCEEEECCCCchhhhhhh
Confidence 34779999999999987521 00012235679999999998764443
Q ss_pred --hcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCC--ee---eecCCC
Q 000572 1206 --DSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQP--RF---VHNESG 1278 (1414)
Q Consensus 1206 --~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p--~l---~~N~s~ 1278 (1414)
+++. .+..++.+.+.+++|++ +|||+.+||+|.++|++... . |+. -..+| .+ +.|+.+
T Consensus 101 ~~~~~~----~~~~~~~l~~lv~~f~~-~gK~VaAIChgp~~L~~~~~-k---Gr~------vT~~~~~~~~~~l~~aGa 165 (213)
T cd03133 101 FAVKGA----DCTVNPEVERLVREFHQ-AGKPIGAICIAPALAAKILG-E---GVE------VTIGNDAGTAAAIEKMGA 165 (213)
T ss_pred hccccc----ccccCHHHHHHHHHHHH-CCCeEEEECHHHHHHHHHhc-c---CCe------EEccCCHHHHHHHHHCCC
Confidence 1111 13346779999999995 89999999999999998633 4 331 12344 32 578888
Q ss_pred ceEEe
Q 000572 1279 RFECR 1283 (1414)
Q Consensus 1279 ~fe~r 1283 (1414)
.|.+.
T Consensus 166 ~~~d~ 170 (213)
T cd03133 166 EHVNC 170 (213)
T ss_pred EEEeC
Confidence 88764
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in zebrafish ES1. This group includes, proteins similar to ES1, Escherichia coli enhancing lycopene biosynthesis protein 2, Azospirillum brasilense iaaC and, human HES1. The catalytic triad typical of GATase1domains is not conserved in this GATase1-like domain. However, in common with GATase1domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. Zebrafish ES1 is expressed specifically in adult photoreceptor cells and appears to be a cytoplasmic protein. A. brasilense iaaC is involved in controlling IAA biosynthesis. |
| >TIGR00379 cobB cobyrinic acid a,c-diamide synthase | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.6e-06 Score=107.04 Aligned_cols=92 Identities=17% Similarity=0.224 Sum_probs=71.4
Q ss_pred CCEEEEEecCCCcCH--HHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchH
Q 000572 1144 KPKVAVIREEGSNGD--REMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPL 1221 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~--~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l 1221 (1414)
+++|||++++-+| . .+-..+|++.|++++.+... ....+.++|+|+||||++. .++..++.+.++
T Consensus 244 ~~~Iava~d~afn-Fy~~~~~~~L~~~g~~~~~~~~~----~d~~l~~~d~l~ipGG~~~--------~~~~~l~~~~~~ 310 (449)
T TIGR00379 244 YVRIAVAQDQAFN-FYYQDNLDALTHNAAELVPFSPL----EDTELPDVDAVYIGGGFPE--------LFAEELSQNQAL 310 (449)
T ss_pred CcEEEEEechhhc-eeHHHHHHHHHHCCCEEEEECCc----cCCCCCCCCEEEeCCcHHH--------HHHHHHHhhhHH
Confidence 4799999998654 4 25577899999998887532 1124668999999999962 122346667889
Q ss_pred HHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1222 LNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1222 ~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
.+.|++|++ .|+|++|||.|||+|.+.
T Consensus 311 ~~~i~~~~~-~G~pv~g~CgG~~~L~~~ 337 (449)
T TIGR00379 311 RDSIKTFIH-QGLPIYGECGGLMYLSQS 337 (449)
T ss_pred HHHHHHHHH-cCCCEEEEcHHHHHHHhh
Confidence 999999995 899999999999999983
|
This model describes cobyrinic acid a,c-diamide synthase, the cobB (cbiA in Salmonella) protein of cobalamin biosynthesis. It is responsible for the amidation of carboxylic groups at positions A and C of either cobyrinic acid or hydrogenobrynic acid. NH(2) groups are provided by glutamine and one molecule of ATP hydrogenolyzed for each amidation. |
| >PRK05368 homoserine O-succinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.3e-05 Score=93.00 Aligned_cols=138 Identities=21% Similarity=0.265 Sum_probs=80.0
Q ss_pred cCcCEEEEcCCCC----chhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhc--CccCCCCCCCcc
Q 000572 1188 DEFRGIVFVGGFS----YADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL--GWIPGPQVGGVH 1261 (1414)
Q Consensus 1188 ~~~dglvlPGG~s----~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l--gllp~~~g~~~~ 1261 (1414)
..|||+||.|... |.|+.= |- . ...+.+++.+..+|+||||-|.|+++.. |+-....+
T Consensus 98 ~~~DG~IITGAp~e~~~fedv~Y----W~-------E-l~~i~~w~~~~~~s~LgICwGaQa~a~algGi~k~~~~---- 161 (302)
T PRK05368 98 EKFDGLIITGAPVEQLPFEDVDY----WD-------E-LKEILDWAKTHVTSTLFICWAAQAALYHLYGIPKYTLP---- 161 (302)
T ss_pred CCCCEEEEcCCCCCCccCCCCch----HH-------H-HHHHHHHHHHcCCCEEEEcHHHHHHHHHcCCCccCCCC----
Confidence 5799999999883 323210 10 1 2334455555689999999999999874 54211111
Q ss_pred CCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCC
Q 000572 1262 GAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDD 1341 (1414)
Q Consensus 1262 ~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~ 1341 (1414)
.-.+|-| ..++....+||++|+. +.+.++.+|-.. + +.+.+. ...+..++...+
T Consensus 162 ------------~K~~Gv~-----~~~~~~~~~pL~~g~~-d~F~~phSr~~~---V-~~~~i~--~~~~l~vLA~S~-- 215 (302)
T PRK05368 162 ------------EKLSGVF-----EHRVLDPHHPLLRGFD-DSFLVPHSRYTE---V-REEDIR--AATGLEILAESE-- 215 (302)
T ss_pred ------------CceeEEE-----EEEEcCCCChhhcCCC-Cccccceeehhh---c-cHHHhc--cCCCCEEEecCC--
Confidence 0112222 2233334689999995 567766666311 1 111111 123333443321
Q ss_pred CCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCccccc
Q 000572 1342 GNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1342 g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~ 1381 (1414)
..++.++.+.++|++++|+|||=...
T Consensus 216 --------------~~gv~~~~~~~~r~~~vQgHPEYd~~ 241 (302)
T PRK05368 216 --------------EAGVYLFASKDKREVFVTGHPEYDAD 241 (302)
T ss_pred --------------CCCeEEEEeCCCCEEEEECCCCCCHH
Confidence 24588888888999999999997544
|
|
| >TIGR01382 PfpI intracellular protease, PfpI family | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.4e-06 Score=89.10 Aligned_cols=97 Identities=21% Similarity=0.331 Sum_probs=71.8
Q ss_pred EEEEEecCCCcCHH--HHHHHHHHcCCceEEeeccc--cc--------C----cccCccCcCEEEEcCCCCchhhhhccc
Q 000572 1146 KVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSD--LI--------N----GAISLDEFRGIVFVGGFSYADVLDSAK 1209 (1414)
Q Consensus 1146 kVaIl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~d--l~--------~----~~~~l~~~dglvlPGG~s~gD~l~~g~ 1209 (1414)
||+|+.++|+.... .+...|.++|+++..++... .. . ......+||+|++|||... ..
T Consensus 1 ~v~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~vvv~Gg~~~-~~----- 74 (166)
T TIGR01382 1 KLLVLTTDEFEDSELLYPLDRLREAGHEVDTVSKEAGTTVGKHGYSVTVDATIDEVNPEEYDALVIPGGRAP-EY----- 74 (166)
T ss_pred CEEEEecCCchHHHHHHHHHHHHHCCCEEEEEecCCCceeccCCceeeccCChhhCCHHHCcEEEECCCCCH-HH-----
Confidence 68999999998433 45788999999998886431 10 0 0112336999999998641 11
Q ss_pred chhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCC
Q 000572 1210 GWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPG 1254 (1414)
Q Consensus 1210 ~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~ 1254 (1414)
...++.+.+.++++.+ .++++.+||.|.++|+++|++.+
T Consensus 75 -----~~~~~~l~~~l~~~~~-~~~~i~~ic~G~~~La~aglL~g 113 (166)
T TIGR01382 75 -----LRLNNKAVRLVREFVE-KGKPVAAICHGPQLLISAGVLRG 113 (166)
T ss_pred -----hccCHHHHHHHHHHHH-cCCEEEEEChHHHHHHhcCccCC
Confidence 2235678889999985 89999999999999999999984
|
The member of this family from Pyrococcus horikoshii has been solved to 2 Angstrom resolution. It is an ATP-independent intracellular protease that crystallizes as a hexameric ring. Cys-101 is proposed as the active site residue in a catalytic triad with the adjacent His-102 and a Glu residue from an adjacent monomer. A member of this family from Bacillus subtilis, GSP18, has been shown to be expressed in response to several forms of stress. A role in the degradation of small peptides has been suggested. A closely related family consists of the thiamine biosynthesis protein ThiJ and its homologs. |
| >PF07685 GATase_3: CobB/CobQ-like glutamine amidotransferase domain; InterPro: IPR011698 This group of enzymes was suggested to be related to the MinD family of ATPases involved in regulation of cell division in bacteria and archaea [] | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.4e-05 Score=83.14 Aligned_cols=56 Identities=20% Similarity=0.219 Sum_probs=46.8
Q ss_pred cCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1185 ISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1185 ~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
..+.++|+|+||||+..-..+ .++.+.+++++|+++++ .|+||+|||.|+|+|.+.
T Consensus 3 ~~~~~~D~i~lpGg~pe~~~~--------~l~~~~~~~~~I~~~~~-~G~pi~aeCGG~~~Lg~~ 58 (158)
T PF07685_consen 3 ELPPDADGIYLPGGYPELFAL--------ELSRNRGLKEAIREAAE-AGGPIYAECGGYQYLGES 58 (158)
T ss_pred CCCCCCCEEEECCCcHHHHHH--------HHHHHhCHHHHHHHHHH-cCCcEEEEchHHHHHHHH
Confidence 467899999999999532222 36678889999999995 999999999999999984
|
Further sequence analysis suggests a model for the interaction of CobB and CobQ with their respective substrates []. CobB and CobQ were also found to contain unusual Triad family (class I) glutamine amidotransferase domains with conserved Cys and His residues, but lacking the Glu residue of the catalytic triad []. ; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process |
| >cd03169 GATase1_PfpI_1 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.4e-06 Score=89.84 Aligned_cols=98 Identities=19% Similarity=0.341 Sum_probs=71.8
Q ss_pred EEEEEecCCCcCHH--HHHHHHHHcCCceEEeecccc-----c---------------Cc----------ccCccCcCEE
Q 000572 1146 KVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSDL-----I---------------NG----------AISLDEFRGI 1193 (1414)
Q Consensus 1146 kVaIl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~dl-----~---------------~~----------~~~l~~~dgl 1193 (1414)
||+|+.++|+.... .+..+|+++|+++.++..+-- . .+ .....+||+|
T Consensus 1 kv~il~~~g~~~~e~~~p~~~l~~ag~~v~~vs~~~~~~~~v~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~l 80 (180)
T cd03169 1 KILILTGDFVEDYEVMVPFQALQEVGHEVDVVAPGKKKGDTVVTAIHDFPGWQTYTEKPGHRFAVTADFDEVDPDDYDAL 80 (180)
T ss_pred CEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEcCCCCCCccccccccccccccchhccCCcEEeccCCcccCCHhHCCEE
Confidence 68999999997433 457789999999999865310 0 01 1122368999
Q ss_pred EEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCC
Q 000572 1194 VFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGP 1255 (1414)
Q Consensus 1194 vlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~ 1255 (1414)
++|||... +. ...++.+.+.|+++++ .++++.|||+|.++|+++|++.+.
T Consensus 81 iv~GG~~~-~~----------~~~~~~~~~~l~~~~~-~~k~i~~ic~G~~~La~agll~g~ 130 (180)
T cd03169 81 VIPGGRAP-EY----------LRLDEKVLAIVRHFAE-ANKPVAAICHGPQILAAAGVLKGR 130 (180)
T ss_pred EEcCCCCh-hh----------hccCHHHHHHHHHHHH-cCCEEEEECcHHHHHHHcCccCCC
Confidence 99999642 11 1234567888999985 899999999999999999999843
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. |
| >COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.1e-05 Score=89.36 Aligned_cols=89 Identities=22% Similarity=0.241 Sum_probs=63.9
Q ss_pred CCCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHH
Q 000572 1143 SKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~ 1222 (1414)
...+|+++. .|.- +...+.|.+-|+++.+|+.+.-. .+..-.+.|||+|.-|.. |-.. -+...
T Consensus 178 ~~~~Vv~iD-~GvK--~nIlr~L~~rg~~vtVVP~~t~~-eeIl~~~pDGiflSNGPG--DP~~-----------~~~~i 240 (368)
T COG0505 178 PGKHVVVID-FGVK--RNILRELVKRGCRVTVVPADTSA-EEILALNPDGIFLSNGPG--DPAP-----------LDYAI 240 (368)
T ss_pred CCcEEEEEE-cCcc--HHHHHHHHHCCCeEEEEcCCCCH-HHHHhhCCCEEEEeCCCC--ChhH-----------HHHHH
Confidence 355788884 4664 67788999999999999754211 111114689999999984 4321 13457
Q ss_pred HHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1223 ~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
+.+++++. ..+|++|||+|.|||+-+
T Consensus 241 ~~ik~l~~-~~iPifGICLGHQllalA 266 (368)
T COG0505 241 ETIKELLG-TKIPIFGICLGHQLLALA 266 (368)
T ss_pred HHHHHHhc-cCCCeEEEcHHHHHHHHh
Confidence 78899995 777999999999999864
|
|
| >cd03134 GATase1_PfpI_like A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.5e-06 Score=88.30 Aligned_cols=97 Identities=21% Similarity=0.312 Sum_probs=72.5
Q ss_pred EEEEEecCCCcCHH--HHHHHHHHcCCceEEeecc-c--cc--Cc-----------ccCccCcCEEEEcCCCCchhhhhc
Q 000572 1146 KVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMS-D--LI--NG-----------AISLDEFRGIVFVGGFSYADVLDS 1207 (1414)
Q Consensus 1146 kVaIl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~-d--l~--~~-----------~~~l~~~dglvlPGG~s~gD~l~~ 1207 (1414)
||+|+.++|+.... .+..+|+++|+++.++..+ . .. .+ .....+||+|++|||.. .+.+
T Consensus 1 ~v~il~~~gf~~~e~~~~~~~l~~a~~~v~~vs~~~~~~v~~~~g~~~i~~d~~~~~~~~~~~D~lvvpGG~~-~~~~-- 77 (165)
T cd03134 1 KVAILAADGFEDVELTYPLYRLREAGAEVVVAGPEAGGEIQGKHGYDTVTVDLTIADVDADDYDALVIPGGTN-PDKL-- 77 (165)
T ss_pred CEEEEcCCCchHHHHHHHHHHHHHCCCEEEEEccCCCcccccCcCceeecCCCChHHCCHHHCCEEEECCCCC-hhhh--
Confidence 58999999998443 4567899999999998655 2 10 00 11123689999999973 2222
Q ss_pred ccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCC
Q 000572 1208 AKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPG 1254 (1414)
Q Consensus 1208 g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~ 1254 (1414)
..++.+.+.|+++.+ .++++.+||+|.++|+++|++.+
T Consensus 78 --------~~~~~~~~~l~~~~~-~~~~i~~ic~G~~~La~aglL~g 115 (165)
T cd03134 78 --------RRDPDAVAFVRAFAE-AGKPVAAICHGPWVLISAGVVRG 115 (165)
T ss_pred --------ccCHHHHHHHHHHHH-cCCeEEEEchHHHHHHhcCccCC
Confidence 235678889999995 89999999999999999999994
|
A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704. |
| >TIGR00313 cobQ cobyric acid synthase CobQ | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.2e-06 Score=104.84 Aligned_cols=88 Identities=18% Similarity=0.220 Sum_probs=68.2
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHH
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~ 1224 (1414)
.+|+|++++-..|..+ ..+|+.. + .+.+..+ +..|.++|+|+||||+++...+. .+++.++.+.
T Consensus 248 ~~Iav~~~~~~~nf~~-~~~L~~~--~--~~~f~~~---~~~l~~~d~lilpGg~~~~~~~~--------~l~~~~~~~~ 311 (475)
T TIGR00313 248 IRIGVVRLPRISNFTD-FEPLRYE--A--FVKFLDL---DDSLTGCDAVIIPGSKSTIADLY--------ALKQSGFAEE 311 (475)
T ss_pred cEEEEEcCCcccCccC-hHHHhhC--C--CeEEeCC---ccccccCCEEEECCcchHHHHHH--------HHHhcChHHH
Confidence 6899999777777775 5577776 2 3333332 22577899999999998755554 5667789999
Q ss_pred HHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1225 FQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1225 i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
|++|.+ .|+|++|||.|||+|.+.
T Consensus 312 i~~~~~-~G~pvlgiCgG~q~Lg~~ 335 (475)
T TIGR00313 312 ILDFAK-EGGIVIGICGGYQMLGKE 335 (475)
T ss_pred HHHHHH-cCCcEEEEcHHHHHhhhh
Confidence 999995 899999999999999983
|
|
| >cd03132 GATase1_catalase Type 1 glutamine amidotransferase (GATase1)-like domain found in at the C-terminal of several large catalases | Back alignment and domain information |
|---|
Probab=98.18 E-value=1e-05 Score=84.15 Aligned_cols=99 Identities=21% Similarity=0.188 Sum_probs=73.4
Q ss_pred CEEEEEecCCCcCHH--HHHHHHHHcCCceEEeeccc--cc--------Cc----ccCccCcCEEEEcCCCCchhhhhcc
Q 000572 1145 PKVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSD--LI--------NG----AISLDEFRGIVFVGGFSYADVLDSA 1208 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~d--l~--------~~----~~~l~~~dglvlPGG~s~gD~l~~g 1208 (1414)
+||+|+.++|+.-.. .+..+|+.+|+++.+++.+. .. .. .....+||+|++|||......
T Consensus 2 ~~v~ill~~g~~~~e~~~~~~~~~~a~~~v~vvs~~~~~v~s~~g~~i~~~~~l~~~~~~~~D~liVpGg~~~~~~---- 77 (142)
T cd03132 2 RKVGILVADGVDAAELSALKAALKAAGANVKVVAPTLGGVVDSDGKTLEVDQTYAGAPSVLFDAVVVPGGAEAAFA---- 77 (142)
T ss_pred CEEEEEEcCCcCHHHHHHHHHHHHHCCCEEEEEecCcCceecCCCcEEecceeecCCChhhcCEEEECCCccCHHH----
Confidence 579999999987332 56889999999999987531 00 00 112235899999998643222
Q ss_pred cchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCC
Q 000572 1209 KGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPG 1254 (1414)
Q Consensus 1209 ~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~ 1254 (1414)
+..++.+.+.|+++++ .++++.+||.|..+|+++|+++.
T Consensus 78 ------~~~~~~l~~~l~~~~~-~~~~I~aic~G~~~La~aGll~~ 116 (142)
T cd03132 78 ------LAPSGRALHFVTEAFK-HGKPIGAVGEGSDLLEAAGIPLE 116 (142)
T ss_pred ------HccChHHHHHHHHHHh-cCCeEEEcCchHHHHHHcCCCCC
Confidence 2345678899999985 89999999999999999999863
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in at the C-terminal of several large catalases. Catalase catalyzes the dismutation of hydrogen peroxide (H2O2) to water and oxygen. This group includes the large catalases: Neurospora crassa Catalase-1 and Catalase-3 and, Escherichia coli HP-II. This GATase1-like domain has an essential role in HP-II catalase activity. However, it lacks enzymatic activity and the catalytic triad typical of GATase1 domains. Catalase-1 and -3 are homotetrameric, HP-II is homohexameric. It has been proposed that this domain may facilitate the folding and oligomerization process. The interface between this GATase1-like domain of HP-II and the core of the subunit forms part of a channel which provides access to the deeply buried catalase active sites of HPII. Catalase-1 is associated with non-growing cells; C |
| >COG0693 ThiJ Putative intracellular protease/amidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.13 E-value=9.3e-06 Score=88.57 Aligned_cols=100 Identities=21% Similarity=0.318 Sum_probs=75.0
Q ss_pred CEEEEEecCCCcCHH--HHHHHHHHcCCceEEeeccc----c-------------cCcccCccCcCEEEEcCCCCchhhh
Q 000572 1145 PKVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSD----L-------------INGAISLDEFRGIVFVGGFSYADVL 1205 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~d----l-------------~~~~~~l~~~dglvlPGG~s~gD~l 1205 (1414)
+||+|+..+|....+ .....|+++|+++..+..+. . .......++||+|++|||......+
T Consensus 3 ~~i~i~~~~g~e~~E~~~p~~~l~~ag~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ydal~ipGG~~~~~~~ 82 (188)
T COG0693 3 KKIAILLADGFEDLELIVPYDVLRRAGFEVDVASPEGKGKSVTSKRGGLVVADDKAFDDADAADYDALVIPGGDHGPEYL 82 (188)
T ss_pred ceeEEEecCcceehhHhHHHHHHHHCCCeEEEEecCCCcceeecccCcceEecccccccCCHhHCCEEEECCCccchhhc
Confidence 589999999998544 45889999999988775432 0 0011224589999999995323332
Q ss_pred hcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcC-ccCCC
Q 000572 1206 DSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLG-WIPGP 1255 (1414)
Q Consensus 1206 ~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lg-llp~~ 1255 (1414)
..++.+.+.+++|.+ .|++|.+||+|.|+|...| ++.+.
T Consensus 83 ----------~~~~~~~~~v~~~~~-~~k~vaaIC~g~~~L~~ag~ll~g~ 122 (188)
T COG0693 83 ----------RPDPDLLAFVRDFYA-NGKPVAAICHGPAVLAAAGLLLKGR 122 (188)
T ss_pred ----------cCcHHHHHHHHHHHH-cCCEEEEEChhHHHHhccccccCCc
Confidence 233678999999996 7999999999999999999 88843
|
|
| >cd03144 GATase1_ScBLP_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP) | Back alignment and domain information |
|---|
Probab=98.09 E-value=6.1e-06 Score=82.06 Aligned_cols=87 Identities=18% Similarity=0.177 Sum_probs=62.2
Q ss_pred EEEEEecCCCc--CHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHH
Q 000572 1146 KVAVIREEGSN--GDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1146 kVaIl~~~G~n--~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~ 1223 (1414)
+|+|.+.+|+. |...+.+.|+..- .+..++.+++..++-. .++|.||+|| +++++.+. .|...+ .+
T Consensus 1 ~v~VY~g~g~~~~~~~~~~~~L~~~~-~v~~~~~~~I~~~~~~-~~ad~lVlPG-Ga~~~~~~--------~L~~~g-~~ 68 (114)
T cd03144 1 NVLVYNGPGASPGSLKHLAELLRLYL-AVSTVTADELAVGPWE-SKTALLVVPG-GADLPYCR--------ALNGKG-NR 68 (114)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHhhcc-ceeeecHHHHhcCchh-hCCCEEEECC-CChHHHHH--------HHHhhC-cH
Confidence 47788888864 3335555666543 5666666666544322 5899999999 88888887 345555 88
Q ss_pred HHHHHHhCCCCeEEEEehhhHH
Q 000572 1224 QFQEFYKRPDTFSLGVCNGCQL 1245 (1414)
Q Consensus 1224 ~i~~f~~~~~~piLGIC~G~Ql 1245 (1414)
.|++|+ +.++|.||||.|-=+
T Consensus 69 ~i~~~v-~~g~p~LGIClGAy~ 89 (114)
T cd03144 69 RIRNFV-RNGGNYLGICAGAYL 89 (114)
T ss_pred HHHHHH-HCCCcEEEEecCccc
Confidence 999999 589999999998643
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Biotin-apoprotein ligase modifies proteins by covalently attaching biotin. ScBLP is known to biotinylate acety-CoA carboxylase and pyruvate carboxylase. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, the Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in a typical GATase1 domain is conserved. |
| >cd03135 GATase1_DJ-1 Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1 | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.7e-05 Score=82.58 Aligned_cols=98 Identities=23% Similarity=0.405 Sum_probs=72.3
Q ss_pred EEEEecCCCcCHH--HHHHHHHHcCCceEEeeccc--cc---Cc----------ccCccCcCEEEEcCCCCchhhhhccc
Q 000572 1147 VAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSD--LI---NG----------AISLDEFRGIVFVGGFSYADVLDSAK 1209 (1414)
Q Consensus 1147 VaIl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~d--l~---~~----------~~~l~~~dglvlPGG~s~gD~l~~g~ 1209 (1414)
|+|+.++|++... .+...|+.+|+++.++..+. .. .+ .....+||.|++|||....+.
T Consensus 1 v~il~~~gf~~~e~~~~~~~~~~a~~~v~~vs~~~~~~~~~~~g~~v~~~~~~~~~~~~~~D~liipGg~~~~~~----- 75 (163)
T cd03135 1 VLVILADGFEEIEAVTPVDVLRRAGIEVTTASLEKKLAVGSSHGIKVKADKTLSDVNLDDYDAIVIPGGLPGAQN----- 75 (163)
T ss_pred CEEEecCCcchHHHHHHHHHHHHCCCEEEEEEcCCCceEeccCCCEEEecCCHhHcCCCCCCEEEECCCCchHHH-----
Confidence 5788999997443 45788999999998886431 10 01 112357999999998621121
Q ss_pred chhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCC
Q 000572 1210 GWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGP 1255 (1414)
Q Consensus 1210 ~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~ 1255 (1414)
...++.+.+.|++|.+ .++++.+||+|..+|+++|++.+.
T Consensus 76 -----~~~~~~l~~~l~~~~~-~~~~i~~ic~g~~~La~aglL~g~ 115 (163)
T cd03135 76 -----LADNEKLIKLLKEFNA-KGKLIAAICAAPAVLAKAGLLKGK 115 (163)
T ss_pred -----HHhCHHHHHHHHHHHH-cCCEEEEEchhHHHHHHcCCcCCC
Confidence 2246778999999995 899999999999999999999843
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. DJ-1 is involved in multiple physiological processes including cancer, Parkinson's disease and male fertility. It is unclear how DJ-1 functions in these. DJ-1 has been shown to possess chaperone activity. DJ-1 is preferentially expressed in the testis and moderately in other tissues; it is induced together with genes involved in oxidative stress response. The Drosophila homologue (DJ-1A) plays an essential role in oxidative stress response and neuronal maintenance. Inhibition of DJ-1A function through RNAi, results in the cellular accumulation of reactive oxygen species, organismal hypersensitivity to oxidative stress, and dysfunction and degeneration of dopaminergic and photoreceptor neurons. DJ-1 has lacks enzymatic activity and the catalytic triad of typical GATase1 domains, however it does contain the highly |
| >PRK13896 cobyrinic acid a,c-diamide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.8e-05 Score=94.77 Aligned_cols=90 Identities=19% Similarity=0.261 Sum_probs=64.6
Q ss_pred CCEEEEEecCCCcCH-HHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHH
Q 000572 1144 KPKVAVIREEGSNGD-REMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~-~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~ 1222 (1414)
++||||-++.-++=- .+-..+|+++ ++.+.++ -+.. ..+.++|+|+||||++. +. + ..+......
T Consensus 233 ~~~iavA~D~AF~FyY~enl~~L~~~-aelv~fS--Pl~~--~~lp~~D~l~lpGG~~e---~~-----~-~~L~~n~~~ 298 (433)
T PRK13896 233 DPTVAVARDAAFCFRYPATIERLRER-ADVVTFS--PVAG--DPLPDCDGVYLPGGYPE---LH-----A-DALADSPAL 298 (433)
T ss_pred CCeEEEEEcCccceeCHHHHHHHHhc-CcEEEEc--CCCC--CCCCCCCEEEeCCCchh---hH-----H-HHHHhCCcH
Confidence 368999987665522 2567789998 7666554 3322 24668999999999964 11 1 133334445
Q ss_pred HHHHHHHhCCCCeEEEEehhhHHHHh
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMAL 1248 (1414)
Q Consensus 1223 ~~i~~f~~~~~~piLGIC~G~QlL~~ 1248 (1414)
+.|++|++ .|+|++|||.|+|+|.+
T Consensus 299 ~~i~~~~~-~G~pi~aeCGG~q~L~~ 323 (433)
T PRK13896 299 DELADRAA-DGLPVLGECGGLMALAE 323 (433)
T ss_pred HHHHHHHH-CCCcEEEEehHHHHhhc
Confidence 89999995 89999999999999998
|
|
| >PRK11574 oxidative-stress-resistance chaperone; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=5.4e-05 Score=83.19 Aligned_cols=100 Identities=16% Similarity=0.265 Sum_probs=70.8
Q ss_pred CCEEEEEecCCCcCHH--HHHHHHHHcCCceEEeeccc-----ccC--c----------ccCccCcCEEEEcCCCCchhh
Q 000572 1144 KPKVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSD-----LIN--G----------AISLDEFRGIVFVGGFSYADV 1204 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~d-----l~~--~----------~~~l~~~dglvlPGG~s~gD~ 1204 (1414)
++||+|+.++|+.... .+...|+++|+++..+.+.. ... + ....++||.|++|||....+.
T Consensus 2 ~~~~~il~~~g~~~~e~~~p~~~l~~ag~~v~~~s~~~~~~~~v~ss~G~~v~~d~~l~~~~~~~~D~l~ipGG~~~~~~ 81 (196)
T PRK11574 2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLEITCSRGVKLLADAPLVEVADGDFDVIVLPGGIKGAEC 81 (196)
T ss_pred CceEEEEeCCCcchhhHhHHHHHHHHCCCeEEEEEccCCCCceEEcCCCCEEeCCCCHHHCCCCCCCEEEECCCCchhhh
Confidence 4689999999998433 56788999999988876431 110 0 112246999999998632121
Q ss_pred hhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHH-HHhcCccCC
Q 000572 1205 LDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQL-MALLGWIPG 1254 (1414)
Q Consensus 1205 l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~Ql-L~~lgllp~ 1254 (1414)
...++.+.+.|++|.+ +++++.+||.|.++ |...|++.+
T Consensus 82 ----------~~~~~~l~~~L~~~~~-~g~~v~aic~G~~~ll~~~gll~~ 121 (196)
T PRK11574 82 ----------FRDSPLLVETVRQFHR-SGRIVAAICAAPATVLVPHDLFPI 121 (196)
T ss_pred ----------hhhCHHHHHHHHHHHH-CCCEEEEECHhHHHHHHhCCccCC
Confidence 2234568889999985 89999999999986 555788873
|
|
| >cd03140 GATase1_PfpI_3 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.9e-05 Score=83.37 Aligned_cols=97 Identities=15% Similarity=0.234 Sum_probs=68.9
Q ss_pred EEEEecCCCcCHH--HHHHHHHHc-CCceEEeecccc----------cCc----ccCccCcCEEEEcCCCCchhhhhccc
Q 000572 1147 VAVIREEGSNGDR--EMSAAFYAA-GFEPWDVTMSDL----------ING----AISLDEFRGIVFVGGFSYADVLDSAK 1209 (1414)
Q Consensus 1147 VaIl~~~G~n~~~--~~~~Al~~a-G~~~~~v~~~dl----------~~~----~~~l~~~dglvlPGG~s~gD~l~~g~ 1209 (1414)
|+|+.++|++..+ .+...|+++ ++++.++..+.- ..+ ....+++|.|++|||.....
T Consensus 1 ~~v~~~~~f~~~e~~~~~~~l~~~~~~~~~~~s~~~~~v~ss~g~~i~~~~~~~~~~~~~~D~l~I~Gg~~~~~------ 74 (170)
T cd03140 1 IAVFLTDEFADWEGAYLAALLNSYEGFEVRTVSPTGEPVTSIGGLRVVPDYSLDDLPPEDYDLLILPGGDSWDN------ 74 (170)
T ss_pred CEEEeccchhhhHHHHHHHHhcccCCcEEEEEeCCCCeeEecCCeEEccccchhHCCHhHccEEEEcCCccccc------
Confidence 5788889988443 456677776 788887764310 000 11225799999999974211
Q ss_pred chhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCC
Q 000572 1210 GWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQ 1256 (1414)
Q Consensus 1210 ~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~ 1256 (1414)
..++.+.+.|+++.+ +++++.+||.|.++|+++|++.+.+
T Consensus 75 ------~~~~~l~~~l~~~~~-~~~~i~aic~G~~~La~aGlL~g~~ 114 (170)
T cd03140 75 ------PEAPDLAGLVRQALK-QGKPVAAICGATLALARAGLLNNRK 114 (170)
T ss_pred ------CCcHHHHHHHHHHHH-cCCEEEEEChHHHHHHHCCCcCCCc
Confidence 124668889999985 8999999999999999999998433
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. |
| >cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E | Back alignment and domain information |
|---|
Probab=97.90 E-value=3.1e-05 Score=86.35 Aligned_cols=97 Identities=19% Similarity=0.157 Sum_probs=70.0
Q ss_pred CCCEEEEEecCCCcC---HHHHHHHHHHc-CCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhc
Q 000572 1143 SKPKVAVIREEGSNG---DREMSAAFYAA-GFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFN 1218 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n~---~~~~~~Al~~a-G~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~ 1218 (1414)
.++||++|-.-.... ...+.++|+++ |+++..++..+.......|.++|+|++||| ++...+. .++.
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad~I~l~GG-~~~~~~~--------~l~~ 100 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEADVIYVGGG-NTFNLLA--------QWRE 100 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCCEEEECCc-hHHHHHH--------HHHH
Confidence 456788874433211 12468899999 999888764431111346889999999996 6555554 5556
Q ss_pred chHHHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1219 QPLLNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1219 ~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
.++.+.|++.++ +|+|++|||.|+|+|++.
T Consensus 101 ~~l~~~l~~~~~-~g~~i~G~SAGa~i~~~~ 130 (212)
T cd03146 101 HGLDAILKAALE-RGVVYIGWSAGSNCWFPS 130 (212)
T ss_pred cCHHHHHHHHHH-CCCEEEEECHhHHhhCCC
Confidence 678888998874 899999999999999984
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption. |
| >TIGR01383 not_thiJ DJ-1 family protein | Back alignment and domain information |
|---|
Probab=97.87 E-value=5.4e-05 Score=81.72 Aligned_cols=98 Identities=23% Similarity=0.328 Sum_probs=70.4
Q ss_pred EEEEEecCCCcCHH--HHHHHHHHcCCceEE--eecc-c--ccC--c----------ccCccCcCEEEEcCCCCchhhhh
Q 000572 1146 KVAVIREEGSNGDR--EMSAAFYAAGFEPWD--VTMS-D--LIN--G----------AISLDEFRGIVFVGGFSYADVLD 1206 (1414)
Q Consensus 1146 kVaIl~~~G~n~~~--~~~~Al~~aG~~~~~--v~~~-d--l~~--~----------~~~l~~~dglvlPGG~s~gD~l~ 1206 (1414)
||+|+.++|+.... .+..+|+.+|+++.. +..+ . ... + .....+||.|++|||......
T Consensus 1 ~v~il~~~gf~~~e~~~~~~~l~~a~~~~~~~~~s~~g~~~v~~~~g~~v~~~~~~~~~~~~~~D~l~v~Gg~~~~~~-- 78 (179)
T TIGR01383 1 KVLVPLAPGFEEMEAVITVDVLRRAGIKVTVAIVGLNGKLPVKGSRGVKILADASLEDVDLEEFDAIVLPGGMPGAEN-- 78 (179)
T ss_pred CEEEEecCCchHHHHHHHHHHHHHCCCEEEEEEeccCCCcceEcCCCCEEeCCCCHHHCCcccCCEEEECCCchHHHH--
Confidence 68999999998433 457789999977765 4432 1 110 0 112456999999998521111
Q ss_pred cccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCC
Q 000572 1207 SAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPG 1254 (1414)
Q Consensus 1207 ~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~ 1254 (1414)
...++.+.+.|+++.+ .++++.+||.|..+|+++|++.+
T Consensus 79 --------~~~~~~l~~~l~~~~~-~~~~i~~ic~G~~~La~aGlL~g 117 (179)
T TIGR01383 79 --------LRNSKLLLNILKKQES-KGKLVAAICAAPAVLLAAGVLLG 117 (179)
T ss_pred --------HhhCHHHHHHHHHHHH-CCCEEEEEChhHHHHHhcCCCCC
Confidence 2245678899999985 89999999999999999999984
|
This model represents the DJ-1 clade of the so-called ThiJ/PfpI family of proteins. PfpI, represented by a distinct model, is a putative intracellular cysteine protease. DJ-1 is described as an oncogene that acts cooperatively with H-Ras. Many members of the DJ-1 clade are annotated (apparently incorrectly) as ThiJ, a protein of thiamine biosynthesis. However, published reports of ThiJ activity and identification of a ThiJ/ThiD bifunctional protein describe an unrelated locus mapping near ThiM, rather than the DJ-1 homolog of E. coli. The ThiJ designation for this family may be spurious; the cited paper PubMed:8885414 refers to a locus near thiD and thiM in E. coli, unlike the gene represented here. Current public annotation reflects ThiJ/ThiD bifunctional activity, apparently a property of ThiD and not of this locus. |
| >cd03147 GATase1_Ydr533c_like Type 1 glutamine amidotransferase (GATase1)-like domain found in Saccharomyces cerevisiae Ydr533c protein | Back alignment and domain information |
|---|
Probab=97.83 E-value=4.1e-05 Score=86.25 Aligned_cols=53 Identities=21% Similarity=0.287 Sum_probs=42.9
Q ss_pred CccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1186 SLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1186 ~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
+.++||+|+||||..-... +..++.+.+.+++|++ .||||.+||+|.++|..+
T Consensus 91 ~~~dYDav~iPGG~g~~~d----------l~~~~~l~~ll~~f~~-~gK~iaAIChgp~~L~~a 143 (231)
T cd03147 91 NPDDYGIFFVAGGHGTLFD----------FPHATNLQKIAQQIYA-NGGVVAAVCHGPAILANL 143 (231)
T ss_pred CHhhCcEEEECCCCchhhh----------cccCHHHHHHHHHHHH-cCCEEEEEChHHHHHHhh
Confidence 4668999999999742111 3346778999999995 899999999999999987
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in Saccharomyces cerevisiae Ydr533c protein. This group includes proteins similar to S. cerevisiae Ydr533c. Ydr533c is upregulated in response to various stress conditions along with the heat shock family. The catalytic triad typical of GATase1domains is not conserved in this GATase1-like domain. However, in common with a typical GATase1domain, a reactive Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. This Cys together with a different His and Glu residue form a different catalytic triad from the typical GATase1domain. Ydr533c protein is a homodimer. |
| >PF09825 BPL_N: Biotin-protein ligase, N terminal; InterPro: IPR019197 The function of this structural domain is unknown | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00044 Score=82.29 Aligned_cols=194 Identities=22% Similarity=0.243 Sum_probs=109.4
Q ss_pred CEEEEEecCCCc--CHHHHHHHHHHc---CCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcc
Q 000572 1145 PKVAVIREEGSN--GDREMSAAFYAA---GFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQ 1219 (1414)
Q Consensus 1145 ~kVaIl~~~G~n--~~~~~~~Al~~a---G~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~ 1219 (1414)
|+|+|...+|+. |-..+...|++. .+.|..|.-.++...+ -...++.||+|||...+=+ + .| +.
T Consensus 1 mnVlVY~G~G~~~~sv~~~~~~Lr~~l~p~y~V~~v~~~~l~~~p-w~~~~~LlV~PGG~d~~y~-~--------~l-~~ 69 (367)
T PF09825_consen 1 MNVLVYNGPGTSPESVRHTLESLRRLLSPHYAVIPVTADELLNEP-WQSKCALLVMPGGADLPYC-R--------SL-NG 69 (367)
T ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhcCCCeEEEEeCHHHhhcCc-cccCCcEEEECCCcchHHH-H--------hh-Ch
Confidence 689999999966 333556677653 3555555444454333 3467999999998742111 1 11 22
Q ss_pred hHHHHHHHHHhCCCCeEEEEehhhHHHHh------------------cCccCCCCCCCccCCCCCCCCCeeeecCCCceE
Q 000572 1220 PLLNQFQEFYKRPDTFSLGVCNGCQLMAL------------------LGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFE 1281 (1414)
Q Consensus 1220 ~l~~~i~~f~~~~~~piLGIC~G~QlL~~------------------lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe 1281 (1414)
.-.+.|++|+. .|+--||||.|--.-.. |++.| |. ......+.+..|.. .-
T Consensus 70 ~g~~~Ir~fV~-~GG~YlGiCAGaY~as~~~ef~~g~p~lev~g~ReL~ffp---G~-----~rG~~~~gf~Y~se--~G 138 (367)
T PF09825_consen 70 EGNRRIRQFVE-NGGGYLGICAGAYYASSRCEFEVGNPKLEVVGPRELAFFP---GI-----ARGPAFPGFQYNSE--SG 138 (367)
T ss_pred HHHHHHHHHHH-cCCcEEEECcchhhhcceeEeccCCcceEeecCccccccc---CC-----ccCccccCCccCCC--CC
Confidence 34668999995 79999999998765443 22233 11 00112334444421 23
Q ss_pred EeeEEEEEccCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeE
Q 000572 1282 CRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAA 1361 (1414)
Q Consensus 1282 ~r~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iag 1361 (1414)
+|-+.+++..+ +..++.+.+-. ||-|.|. +.+.. .++-+|.++|.+... -|.+. ...|.
T Consensus 139 ara~~l~~~~~------~~~~~~~~~yy-nGG~~Fv--~~~~~---~~~v~vLA~Y~~~~~--------v~~~~-~~aAv 197 (367)
T PF09825_consen 139 ARAVKLKVNDS------QAVPSEFSSYY-NGGGVFV--DADKY---DKNVEVLARYEDDLD--------VPGGE-GKAAV 197 (367)
T ss_pred eEeEEEEecCC------CCCCceeEEEE-CCceEEe--Ccccc---CCCeEEEEEEecCCC--------CCCCC-CCcEE
Confidence 46677777432 22244555433 5544443 23221 345688999987322 22221 12333
Q ss_pred EEcC--CCcEEEEccCCccccc
Q 000572 1362 ICSP--DGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1362 i~s~--dGrvlg~m~HPEr~~~ 1381 (1414)
|... +|+++=+.+|||=...
T Consensus 198 V~c~vGkG~aiLsG~HpE~~~~ 219 (367)
T PF09825_consen 198 VYCKVGKGRAILSGPHPEFSPS 219 (367)
T ss_pred EEEEeCCceEEEEecccccChh
Confidence 3322 7999999999997644
|
It is found to the N terminus of the biotin protein ligase catalytic domain []. Biotin protein ligase carries out the post-translational modification of specific proteins by the attachment of biotin. It acts on various carboxylases such as acetyl-CoA-carboxylase, pyruvate carboxylase, propionyl CoA carboxylase, and 3-methylcrotonyl CoA carboxylase. |
| >PRK04155 chaperone protein HchA; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0001 Score=85.50 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=59.9
Q ss_pred HHHHHHHcCCceEEeeccccc--------------------------Cc---------ccC--ccCcCEEEEcCCCCchh
Q 000572 1161 MSAAFYAAGFEPWDVTMSDLI--------------------------NG---------AIS--LDEFRGIVFVGGFSYAD 1203 (1414)
Q Consensus 1161 ~~~Al~~aG~~~~~v~~~dl~--------------------------~~---------~~~--l~~~dglvlPGG~s~gD 1203 (1414)
....|+++|+++.+++.+.-. .. ... .++||+|+||||...-.
T Consensus 82 P~~~L~~AG~eVdiAS~~G~~~~~d~~s~~~~d~~v~~~~~~~~~~l~~~~~l~~v~~~~~~~~~dYDaV~iPGG~g~~~ 161 (287)
T PRK04155 82 PMYHLHKAGFEFDVATLSGNPVKFEYWAMPHEDEAVMGFYEKYKSKFKQPKKLADVVANLLAPDSDYAAVFIPGGHGALI 161 (287)
T ss_pred HHHHHHHCCCEEEEEecCCCccccccccccccchhHHHHHHHhhhhccCceeHHHhhhhhcCCcccccEEEECCCCchHH
Confidence 377999999999999764200 00 001 46899999999974222
Q ss_pred hhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcC
Q 000572 1204 VLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLG 1250 (1414)
Q Consensus 1204 ~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lg 1250 (1414)
. +..++.+.+.++.|++ .+|+|.+||+|.++|..++
T Consensus 162 d----------L~~~~~l~~ll~~~~~-~~K~VaAICHGPa~Ll~a~ 197 (287)
T PRK04155 162 G----------LPESEDVAAALQWALD-NDRFIITLCHGPAALLAAG 197 (287)
T ss_pred H----------HhhCHHHHHHHHHHHH-cCCEEEEEChHHHHHHHcC
Confidence 2 3356778999999995 8999999999999999988
|
|
| >cd01653 GATase1 Type 1 glutamine amidotransferase (GATase1)-like domain | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00011 Score=70.54 Aligned_cols=89 Identities=28% Similarity=0.325 Sum_probs=65.9
Q ss_pred EEEEecCCCcCH--HHHHHHHHHcCCceEEeecccccC-cccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHH
Q 000572 1147 VAVIREEGSNGD--REMSAAFYAAGFEPWDVTMSDLIN-GAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1147 VaIl~~~G~n~~--~~~~~Al~~aG~~~~~v~~~dl~~-~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~ 1223 (1414)
|+|+..++.+.. .....+|+.+|+++..++...... ......++|+|++|||........ .+..+.+
T Consensus 1 v~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~lii~g~~~~~~~~~----------~~~~~~~ 70 (115)
T cd01653 1 VAVLLFPGFEELELASPLDALREAGAEVDVVSPDGGPVESDVDLDDYDGLILPGGPGTPDDLA----------RDEALLA 70 (115)
T ss_pred CEEEecCCCchhhhHHHHHHHHHCCCeEEEEcCCCCceeccCChhccCEEEECCCCCchhhhc----------cCHHHHH
Confidence 466777777753 466889999999999998654211 023467899999999986433321 2456778
Q ss_pred HHHHHHhCCCCeEEEEehhhHHH
Q 000572 1224 QFQEFYKRPDTFSLGVCNGCQLM 1246 (1414)
Q Consensus 1224 ~i~~f~~~~~~piLGIC~G~QlL 1246 (1414)
.++++.. .+++++|||.|+|+|
T Consensus 71 ~i~~~~~-~~~~i~~~c~g~~~l 92 (115)
T cd01653 71 LLREAAA-AGKPILGICLGAQLL 92 (115)
T ss_pred HHHHHHH-cCCEEEEECchhHhH
Confidence 8888885 789999999999998
|
Type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA. and, the A4 beta-galactosidase middle domain. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-depende |
| >cd03137 GATase1_AraC_1 AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain | Back alignment and domain information |
|---|
Probab=97.77 E-value=9.5e-05 Score=80.46 Aligned_cols=97 Identities=19% Similarity=0.163 Sum_probs=70.6
Q ss_pred EEEEecCCCcCHH--HHHHHHHHcC-------CceEEeecccc-cC---------c--ccCccCcCEEEEcCCCCchhhh
Q 000572 1147 VAVIREEGSNGDR--EMSAAFYAAG-------FEPWDVTMSDL-IN---------G--AISLDEFRGIVFVGGFSYADVL 1205 (1414)
Q Consensus 1147 VaIl~~~G~n~~~--~~~~Al~~aG-------~~~~~v~~~dl-~~---------~--~~~l~~~dglvlPGG~s~gD~l 1205 (1414)
|+|+.++|+.-.. .+...|+.++ +++.++..+.- .. + -.++.++|.|++|||.....
T Consensus 1 i~ill~~gf~~~~~~~~~d~l~~a~~~~~~~~~~v~~vs~~~~~v~~~~g~~v~~d~~~~~~~~~D~liipGg~~~~~-- 78 (187)
T cd03137 1 VAVLVFPGVSLLDLSGPAEVFGEANRALGPPAYELRVCSPEGGPVRSSSGLSLVADAGLDALAAADTVIVPGGPDVDG-- 78 (187)
T ss_pred CEEEEeCCCChhHHhHHHHHHHHHHhhcCCCCeEEEEEeCCCCceeecCCcEEEcCcCccccCCCCEEEECCCccccc--
Confidence 5778889987332 4577888887 78887764311 00 0 11456899999999875321
Q ss_pred hcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCC
Q 000572 1206 DSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGP 1255 (1414)
Q Consensus 1206 ~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~ 1255 (1414)
...++.+.+.|+++.+ +++++.+||.|.++|+++|++.+.
T Consensus 79 ---------~~~~~~l~~~l~~~~~-~~~~i~aic~g~~~La~aGlL~~~ 118 (187)
T cd03137 79 ---------RPPPPALLAALRRAAA-RGARVASVCTGAFVLAEAGLLDGR 118 (187)
T ss_pred ---------ccCCHHHHHHHHHHHh-cCCEEEEECHHHHHHHHccCcCCC
Confidence 2246778999999985 899999999999999999999843
|
A subgroup of AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain. AraC regulators are defined by a AraC-type helix-turn-helix DNA binding domain at their C-terminal. AraC family transcriptional regulators are widespread among bacteria and are involved in regulating diverse and important biological functions, including carbon metabolism, stress responses and virulence in different microorganisms. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with typical GATase1domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. |
| >KOG2387 consensus CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00021 Score=83.45 Aligned_cols=46 Identities=28% Similarity=0.415 Sum_probs=32.3
Q ss_pred ccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHH
Q 000572 1187 LDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMA 1247 (1414)
Q Consensus 1187 l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~ 1247 (1414)
|..+||+++||||. +.--.| ...+.+ +..++++|.||||+|||+-+
T Consensus 361 l~~adGilvPGGFG--~RGveG------------~i~Aak-~ARen~iP~LGiCLGmQ~Av 406 (585)
T KOG2387|consen 361 LKSADGILVPGGFG--DRGVEG------------KILAAK-WARENKIPFLGICLGMQLAV 406 (585)
T ss_pred hccCCeEEeCCccc--ccchhH------------HHHHHH-HHHhcCCCeEeeehhhhHHH
Confidence 56799999999994 332222 233333 33358899999999999865
|
|
| >cd03148 GATase1_EcHsp31_like Type 1 glutamine amidotransferase (GATase1)-like domain found in Escherichia coli Hsp31 protein (EcHsp31) | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00013 Score=82.32 Aligned_cols=54 Identities=20% Similarity=0.233 Sum_probs=44.2
Q ss_pred ccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCc
Q 000572 1187 LDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGW 1251 (1414)
Q Consensus 1187 l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgl 1251 (1414)
.++||+|++|||...-.. +..++.+.+.+++|.+ .||++.+||+|.++|..+++
T Consensus 94 ~~dYDav~iPGG~g~~~d----------l~~~~~l~~ll~~f~~-~gK~VaAICHGp~~L~~a~l 147 (232)
T cd03148 94 DSEYAAVFIPGGHGALIG----------IPESQDVAAALQWAIK-NDRFVITLCHGPAAFLAARH 147 (232)
T ss_pred hhhceEEEECCCCCChhh----------cccCHHHHHHHHHHHH-cCCEEEEECcHHHHHHhccC
Confidence 468999999999653222 3346778889999995 99999999999999998887
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in Escherichia coli Hsp31 protein (EcHsp31). This group includes proteins similar to EcHsp31. EcHsp31 has chaperone activity. EcHsp31 coordinates a metal ion using a 2-His-1-carboxylate motif present in various ions that use iron as a cofactor such as Carboxypeptidase A. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with a typical GATase1domain, a reactive Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. This Cys together with a different His and, an Asp (rather than a Glu) residue form a different catalytic triad from the typical GATase1 domain. EcHsp31 is a homodimer. |
| >cd03139 GATase1_PfpI_2 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00018 Score=77.84 Aligned_cols=96 Identities=19% Similarity=0.250 Sum_probs=70.4
Q ss_pred EEEEecCCCcCHH--HHHHHHHHcC-----CceEEeeccc--c--------cCc--ccCccCcCEEEEcCCCCchhhhhc
Q 000572 1147 VAVIREEGSNGDR--EMSAAFYAAG-----FEPWDVTMSD--L--------ING--AISLDEFRGIVFVGGFSYADVLDS 1207 (1414)
Q Consensus 1147 VaIl~~~G~n~~~--~~~~Al~~aG-----~~~~~v~~~d--l--------~~~--~~~l~~~dglvlPGG~s~gD~l~~ 1207 (1414)
|+|+.++|++... .+..+|+.++ +++.++..+. . ..+ -....+||.|++|||... +.
T Consensus 1 i~ill~~gf~~~~~~~~~d~~~~a~~~~~~~~v~~vs~~~~~v~~~~g~~i~~d~~~~~~~~~D~lvipgg~~~-~~--- 76 (183)
T cd03139 1 VGILLFPGVEVLDVIGPYEVFGRAPRLAAPFEVFLVSETGGPVSSRSGLTVLPDTSFADPPDLDVLLVPGGGGT-RA--- 76 (183)
T ss_pred CEEEEeCCCCEehheeHHHHHHHhhccCCCEEEEEEECCCCceEeCCCCEEcCCcccccCCCCCEEEECCCcch-hh---
Confidence 5788889987332 4578899998 8988886431 1 000 112347999999998531 11
Q ss_pred ccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCC
Q 000572 1208 AKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPG 1254 (1414)
Q Consensus 1208 g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~ 1254 (1414)
...++.+.+.|+++.+ .++++.+||.|..+|+++|++.+
T Consensus 77 -------~~~~~~~~~~l~~~~~-~~k~i~aic~g~~~La~agll~g 115 (183)
T cd03139 77 -------LVNDPALLDFIRRQAA-RAKYVTSVCTGALLLAAAGLLDG 115 (183)
T ss_pred -------hccCHHHHHHHHHhcc-cCCEEEEEchHHHHHHhcCCcCC
Confidence 2346778999999984 89999999999999999999984
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. |
| >COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00016 Score=87.61 Aligned_cols=91 Identities=18% Similarity=0.199 Sum_probs=74.2
Q ss_pred CCCEEEEEecCCCcCHHHHHHHHHHc-CCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchH
Q 000572 1143 SKPKVAVIREEGSNGDREMSAAFYAA-GFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPL 1221 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n~~~~~~~Al~~a-G~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l 1221 (1414)
...+|+|++.|-..|..++ .+|... +..+..|. ...+|.+.|.+||||--+.-..+. +++..++
T Consensus 250 ~~i~Iav~~lp~isNFtD~-dpL~~~~~v~v~~v~------~~~~l~~~dlvIlPGsk~t~~DL~--------~lr~~g~ 314 (486)
T COG1492 250 RAIRIAVIRLPRISNFTDF-DPLRAEPDVRVRFVK------PGSDLRDADLVILPGSKNTIADLK--------ILREGGM 314 (486)
T ss_pred CceEEEEecCCCccccccc-hhhhcCCCeEEEEec------cCCCCCCCCEEEeCCCcccHHHHH--------HHHHcCH
Confidence 3458999999988877763 355554 77787776 345788899999999998777766 7778889
Q ss_pred HHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1222 LNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1222 ~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
.++|.++. +.+.+++|||-|||||.+.
T Consensus 315 d~~i~~~~-~~~~~viGICGG~QmLG~~ 341 (486)
T COG1492 315 DEKILEYA-RKGGDVIGICGGYQMLGRR 341 (486)
T ss_pred HHHHHHHH-hCCCCEEEEcchHHhhhhh
Confidence 99999999 4799999999999999974
|
|
| >KOG1224 consensus Para-aminobenzoate (PABA) synthase ABZ1 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0011 Score=78.97 Aligned_cols=194 Identities=22% Similarity=0.214 Sum_probs=99.7
Q ss_pred CCCEEEEEecCCCcCHHHHHHHHHHc-CCceE-EeecccccCc-ccCcc---CcCEEEEcCCCCchhhhhcccchhHHHh
Q 000572 1143 SKPKVAVIREEGSNGDREMSAAFYAA-GFEPW-DVTMSDLING-AISLD---EFRGIVFVGGFSYADVLDSAKGWSASIR 1216 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n~~~~~~~Al~~a-G~~~~-~v~~~dl~~~-~~~l~---~~dglvlPGG~s~gD~l~~g~~~a~~~l 1216 (1414)
++.++..|..|.+.. +.+++++..+ |..++ +||.+-...+ -..+. .||+||+.=|...+ +.+.
T Consensus 13 ~rl~~LlID~YDSyT-fNiy~ll~~~~~vp~V~~vh~~~~~~d~~~~l~q~~~FDaIVVgPGPG~P--~~a~-------- 81 (767)
T KOG1224|consen 13 PRLRTLLIDNYDSYT-FNIYQLLSTINGVPPVVIVHDEWTWEDAYHYLYQDVAFDAIVVGPGPGSP--MCAA-------- 81 (767)
T ss_pred hheeEEEEecccchh-hhHHHHHHHhcCCCcEEEEeccccCHHHHHHHhhccccceEEecCCCCCC--CcHH--------
Confidence 456788887776652 3456677755 44333 3453311111 01233 39998885555322 2211
Q ss_pred hcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCcc
Q 000572 1217 FNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIM 1296 (1414)
Q Consensus 1217 ~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~ 1296 (1414)
+.++...+ |.+.++.||||||+|||.|. +.- |+.+. .-+...| | |-.. |..+..+.
T Consensus 82 -d~gI~~rl--~~~~~~iPilGICLGfQal~---l~h---GA~v~------~~n~p~H---G----rvs~--i~~~~~~~ 137 (767)
T KOG1224|consen 82 -DIGICLRL--LLECRDIPILGICLGFQALG---LVH---GAHVV------HANEPVH---G----RVSG--IEHDGNIL 137 (767)
T ss_pred -HHHHHHHH--HHhcCCCceeeeehhhHhHh---hhc---cccee------cCCCccc---c----eeee--EEecCcEE
Confidence 11222222 33346899999999999875 444 32111 0001111 1 1112 22344555
Q ss_pred ccCCC---CcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEc
Q 000572 1297 LKGME---GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMM 1373 (1414)
Q Consensus 1297 l~g~~---g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m 1373 (1414)
|.|+. .+.+-+.-.|+ .++. +.-.+.| +++.+--|+ ||- -+-+|-...=-|+|+|
T Consensus 138 f~gi~sg~~~~fK~~RYHS---L~in-~~pid~l----~il~t~~dd------------ng~--ilMsi~~~~fPhfG~q 195 (767)
T KOG1224|consen 138 FSGIPSGRNSDFKVVRYHS---LIIN-SLPIDLL----PILWTIYDD------------NGH--ILMSIMHSSFPHFGLQ 195 (767)
T ss_pred EccCCCCCcccceeEEeEE---EEec-CCchhhh----cceeEeecC------------Cce--EEEEeeccCCCcccee
Confidence 66652 34555556777 5553 3222222 344333232 342 2445554466799999
Q ss_pred cCCccccccccCCCCCCCCCCCCCCCChhHHHHHHHHH
Q 000572 1374 PHPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1374 ~HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~na~~ 1411 (1414)
+|||-+... -+.++|+|+.+
T Consensus 196 yHPES~~s~------------------~g~~lfkNFl~ 215 (767)
T KOG1224|consen 196 YHPESIAST------------------YGSQLFKNFLD 215 (767)
T ss_pred eChHHhhhh------------------hhHHHHHHHHH
Confidence 999976552 57788888765
|
|
| >PRK11249 katE hydroperoxidase II; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00045 Score=88.53 Aligned_cols=101 Identities=19% Similarity=0.137 Sum_probs=75.0
Q ss_pred CCCCEEEEEecCCCcCHH--HHHHHHHHcCCceEEeeccc--cc--Cc-----ccCc-----cCcCEEEEcCCCCchhhh
Q 000572 1142 TSKPKVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSD--LI--NG-----AISL-----DEFRGIVFVGGFSYADVL 1205 (1414)
Q Consensus 1142 ~~~~kVaIl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~d--l~--~~-----~~~l-----~~~dglvlPGG~s~gD~l 1205 (1414)
...+||+||..+|+.... .+..+|+++|+++.+|.... +. .+ ...+ ..||+|++|||....+.
T Consensus 595 ~~gRKIaILVaDG~d~~ev~~~~daL~~AGa~V~VVSp~~G~V~~s~G~~I~aD~t~~~~~Sv~FDAVvVPGG~~~~~~- 673 (752)
T PRK11249 595 IKGRKVAILLNDGVDAADLLAILKALKAKGVHAKLLYPRMGEVTADDGTVLPIAATFAGAPSLTFDAVIVPGGKANIAD- 673 (752)
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCEEecceeeccCCccCCCEEEECCCchhHHH-
Confidence 356799999999987433 56889999999999986431 10 00 0112 25999999998642222
Q ss_pred hcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccC
Q 000572 1206 DSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIP 1253 (1414)
Q Consensus 1206 ~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp 1253 (1414)
+..+..+.+.|+++++ .+|+|.+||.|.++|.++|+.+
T Consensus 674 ---------L~~d~~al~fL~eayk-HgK~IAAiCaG~~LLaaAGL~~ 711 (752)
T PRK11249 674 ---------LADNGDARYYLLEAYK-HLKPIALAGDARKLKAALKLPD 711 (752)
T ss_pred ---------HhhCHHHHHHHHHHHH-cCCEEEEeCccHHHHHhcCCCC
Confidence 3356778999999995 8999999999999999999844
|
|
| >cd03128 GAT_1 Type 1 glutamine amidotransferase (GATase1)-like domain | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00039 Score=63.61 Aligned_cols=88 Identities=28% Similarity=0.357 Sum_probs=61.6
Q ss_pred EEEecCCCcCH--HHHHHHHHHcCCceEEeecccccCc-ccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHH
Q 000572 1148 AVIREEGSNGD--REMSAAFYAAGFEPWDVTMSDLING-AISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224 (1414)
Q Consensus 1148 aIl~~~G~n~~--~~~~~Al~~aG~~~~~v~~~dl~~~-~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~ 1224 (1414)
+++..++.+.. ..+..++++.++.+..+........ .....++|+|++|||........ .+..+.+.
T Consensus 2 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lii~g~~~~~~~~~----------~~~~~~~~ 71 (92)
T cd03128 2 AVLLFGGSEELELASPLDALREAGAEVDVVSPDGGPVESDVDLDDYDGLILPGGPGTPDDLA----------WDEALLAL 71 (92)
T ss_pred EEEecCCcEEEeeecHHHHHHhCCCEEEEEeCCCCcccccCCcccCCEEEECCCCcchhhhc----------cCHHHHHH
Confidence 45555555432 3567899999999888875543211 13467899999999987433321 24567778
Q ss_pred HHHHHhCCCCeEEEEehhhHHH
Q 000572 1225 FQEFYKRPDTFSLGVCNGCQLM 1246 (1414)
Q Consensus 1225 i~~f~~~~~~piLGIC~G~QlL 1246 (1414)
+.++.. .+++++|+|.|+|++
T Consensus 72 ~~~~~~-~~~~i~~~~~g~~~~ 92 (92)
T cd03128 72 LREAAA-AGKPVLGICLGAQLL 92 (92)
T ss_pred HHHHHH-cCCEEEEEecccccC
Confidence 888885 689999999999874
|
Type 1 glutamine amidotransferase (GATase1)-like domain. This group contains proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA, the A4 beta-galactosidase middle domain and peptidase E. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamin |
| >COG3442 Predicted glutamine amidotransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00071 Score=73.10 Aligned_cols=171 Identities=20% Similarity=0.237 Sum_probs=95.4
Q ss_pred HHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEeh
Q 000572 1162 SAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCN 1241 (1414)
Q Consensus 1162 ~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~ 1241 (1414)
.+..+.-|..+.++.++- . +....+++|.+++-||.-|...+- ++. .....+.+++.++ .|+|+|.||-
T Consensus 27 r~ra~~rgi~v~i~~vsl-~-d~~~~~~~Dl~~~GGgqD~eQ~i~------t~d--~~~k~~~l~~~i~-~g~p~laiCg 95 (250)
T COG3442 27 RQRAEKRGIKVEIVEVSL-T-DTFPDDSYDLYFLGGGQDYEQEIA------TRD--LLTKKEGLKDAIE-NGKPVLAICG 95 (250)
T ss_pred hHHHHhcCCceEEEEeec-C-CCCCcccccEEEecCchHHHHHHH------hhh--hccccHHHHHHHh-cCCcEEEEcc
Confidence 446677788887775442 1 222336899999999886654442 112 1234567888885 8999999999
Q ss_pred hhHHHHhcCccCCCCCCCccCCCCCCCCCeeeec-CCCceEEeeEEEEEccCCCccccCCCCcEEEEEEeeccceEEeCC
Q 000572 1242 GCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHN-ESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPD 1320 (1414)
Q Consensus 1242 G~QlL~~lgllp~~~g~~~~~~~~~~~~p~l~~N-~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~ 1320 (1414)
|+|+|..- ..+ ..|..+.++..- -+.+.| ...||+- ++.+.++-+. .+-++.+..+-.|+ ||-|..
T Consensus 96 g~QlLG~y-Y~~-a~G~ri~GlGiL---d~~T~~~~~~R~IG---div~~~~~~~---e~~~et~~GFENH~-GrT~L~- 162 (250)
T COG3442 96 GYQLLGQY-YET-ASGTRIDGLGIL---DHYTENPQTKRFIG---DIVIENTLAG---EEFGETLVGFENHG-GRTYLG- 162 (250)
T ss_pred chhhccce-eec-CCCcEeecccce---eeeeccccccceee---eEEeecccch---HHhCCeeeeeecCC-CceecC-
Confidence 99999872 221 112211110000 011222 1223322 4555443222 12256677788998 665653
Q ss_pred hhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCC
Q 000572 1321 DGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHP 1376 (1414)
Q Consensus 1321 ~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HP 1376 (1414)
|. ..-| |.|+.-|-+ |++ ++..|+. .+|++|.-+|=
T Consensus 163 ~d-~~pL---G~Vv~G~GN-------------n~e-D~~eG~~--ykn~~aTY~HG 198 (250)
T COG3442 163 PD-VKPL---GKVVYGYGN-------------NGE-DGTEGAH--YKNVIATYFHG 198 (250)
T ss_pred CC-Cccc---eeEEEccCC-------------Ccc-cccccee--eeeeEEEeecC
Confidence 22 1222 666654422 344 4566776 48999988883
|
|
| >PRK06423 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0006 Score=62.83 Aligned_cols=64 Identities=13% Similarity=0.204 Sum_probs=55.1
Q ss_pred EEEEecCCCcCChhhhHHHHHHHHcCCCcCCeEEEEEEEEEecCCCCChhHHHHHHH-hccccccccc
Q 000572 178 IVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAA-MVHDRMTECV 244 (1414)
Q Consensus 178 ~i~v~pr~g~~~~~s~~a~~i~~~~g~~~~~rie~~~~y~~~~~~~~~~~~~~~~~~-~l~d~mt~~~ 244 (1414)
.|+|+||+|+.||-+.++.+.++.+|+.++..+..++.|.|.+ .+ +++.+.++. +|+|+.+|..
T Consensus 4 ~v~V~~k~gv~Dp~G~ti~~~l~~lg~~~v~~Vr~~k~~~l~~-~~--~~~~~~i~~~lL~Npvie~~ 68 (73)
T PRK06423 4 KVEVTYKPGVEDPEALTILKNLNILGYNGIKGVSISKVYYFDA-DS--YNEVDEIAGKILTNPVIHSY 68 (73)
T ss_pred EEEEEECCCCcChHHHHHHHHHHHcCCCCcceEEEEEEEEEec-CC--HHHHHHHHHHhcCCceeeEE
Confidence 6999999999999999999988889998899999999999975 22 455666665 9999999865
|
|
| >cd03141 GATase1_Hsp31_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0004 Score=77.95 Aligned_cols=79 Identities=19% Similarity=0.238 Sum_probs=58.3
Q ss_pred HHHHHHHcCCceEEeeccc-c---------------------------------cCcccCccCcCEEEEcCCCCchhhhh
Q 000572 1161 MSAAFYAAGFEPWDVTMSD-L---------------------------------INGAISLDEFRGIVFVGGFSYADVLD 1206 (1414)
Q Consensus 1161 ~~~Al~~aG~~~~~v~~~d-l---------------------------------~~~~~~l~~~dglvlPGG~s~gD~l~ 1206 (1414)
...+|+++|+++..++... . .-....+++||+|+||||......
T Consensus 28 p~~~l~~aG~~V~~as~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dal~ipGG~~~~~~-- 105 (221)
T cd03141 28 PYDVFTEAGYEVDFASPKGGKVPLDPRSLDAEDDDDASVFDNDEEFKKKLANTKKLSDVDPSDYDAIFIPGGHGPMFD-- 105 (221)
T ss_pred HHHHHHHCCCeEEEECCCCCCCCcCchhccccccCHHHHhhcCHHHHHHHHccCChhHCCHhHceEEEECCCcccccc--
Confidence 4778889999988875421 0 001224558999999998642111
Q ss_pred cccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcC
Q 000572 1207 SAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLG 1250 (1414)
Q Consensus 1207 ~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lg 1250 (1414)
+..++.+.+.|++|.+ +++++.+||.|.++|+++|
T Consensus 106 --------l~~~~~l~~~l~~~~~-~~k~iaaIC~g~~~La~ag 140 (221)
T cd03141 106 --------LPDNPDLQDLLREFYE-NGKVVAAVCHGPAALLNVK 140 (221)
T ss_pred --------cccCHHHHHHHHHHHH-cCCEEEEEcchHHHHHhcc
Confidence 2346778999999995 8999999999999999998
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein (EcHsp31). This group includes EcHsp31 and Saccharomyces cerevisiae Ydr533c protein. EcHsp31 has chaperone activity. Ydr533c is upregulated in response to various stress conditions along with the heat shock family. EcHsp31 coordinates a metal ion using a 2-His-1-carboxylate motif present in various ions that use iron as a cofactor such as Carboxypeptidase A. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with a typical GATase1 domain, a reactive Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For EcHsp31, this Cys together with a different His and, an Asp (rather than a Glu) residue form a different |
| >cd03138 GATase1_AraC_2 AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00085 Score=73.59 Aligned_cols=60 Identities=18% Similarity=0.186 Sum_probs=47.5
Q ss_pred CccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCC
Q 000572 1186 SLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPG 1254 (1414)
Q Consensus 1186 ~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~ 1254 (1414)
+..+||.|++|||....+.. ....++.+.+.|+++.+ +++++.+||+|.++|+++|++.+
T Consensus 66 ~~~~~D~liIpgg~~~~~~~--------~~~~~~~l~~~l~~~~~-~~~~i~aic~G~~~La~agll~g 125 (195)
T cd03138 66 DVPAPDLVIVPGLGGDPDEL--------LLADNPALIAWLRRQHA-NGATVAAACTGVFLLAEAGLLDG 125 (195)
T ss_pred ccCCCCEEEECCCcCCchhh--------hhhccHHHHHHHHHHHH-cCCEEEEecHHHHHHHHccCcCC
Confidence 35689999999987533310 12346778999999985 89999999999999999999984
|
A subgroup of AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain. AraC regulators are defined by a AraC-type helix-turn-helix DNA binding domain at their C-terminal. AraC family transcriptional regulators are widespread among bacteria and are involved in regulating diverse and important biological functions, including carbon metabolism, stress responses and virulence in different microorganisms. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with typical GATase1domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. |
| >KOG0370 consensus Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0025 Score=80.38 Aligned_cols=87 Identities=21% Similarity=0.310 Sum_probs=64.4
Q ss_pred CCCCEEEEEecCCCcCHHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchH
Q 000572 1142 TSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPL 1221 (1414)
Q Consensus 1142 ~~~~kVaIl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l 1221 (1414)
.+.+||+++. -|.- ....+.|..-|+++.+|+.+..... .+||||+|..|..-+... +.+
T Consensus 170 Gk~~~I~aiD-cG~K--~N~IRcL~~RGa~vtVvPw~~~i~~----~~yDGlflSNGPGdPe~~-------------~~~ 229 (1435)
T KOG0370|consen 170 GKSLRILAID-CGLK--YNQIRCLVKRGAEVTVVPWDYPIAK----EEYDGLFLSNGPGDPELC-------------PLL 229 (1435)
T ss_pred CcccEEEEcc-cCch--HHHHHHHHHhCceEEEecCCccccc----cccceEEEeCCCCCchhh-------------HHH
Confidence 4466888884 3543 4557888999999999986643322 389999999998533332 346
Q ss_pred HHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1222 LNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1222 ~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
.+.+++.+. .++|++|||.|.|+|+.+
T Consensus 230 v~~vr~lL~-~~~PvfGIClGHQllA~A 256 (1435)
T KOG0370|consen 230 VQNVRELLE-SNVPVFGICLGHQLLALA 256 (1435)
T ss_pred HHHHHHHHh-CCCCeEEEehhhHHHHHh
Confidence 677888886 469999999999999974
|
|
| >PF01965 DJ-1_PfpI: DJ-1/PfpI family; InterPro: IPR002818 This signature defines a diverse group of protein families which include proteins involved in RNA-protein interaction regulation, thiamine biosynthesis, Ras-related signal transduction, and those with protease activity | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00021 Score=74.96 Aligned_cols=61 Identities=26% Similarity=0.525 Sum_probs=47.0
Q ss_pred ccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCC
Q 000572 1184 AISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPG 1254 (1414)
Q Consensus 1184 ~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~ 1254 (1414)
....++||+|+||||....+.++. .++.+.+.+++|++ .+|||.+||+|..+|...|++.+
T Consensus 32 ~~~~~~yDalilpGG~~~~~~l~~---------~~~~l~~~~~~~~~-~~k~iaaIC~g~~~L~~~gll~g 92 (147)
T PF01965_consen 32 EIDPSDYDALILPGGHGGADDLRT---------DSKDLLELLKEFYE-AGKPIAAICHGPAVLAAAGLLKG 92 (147)
T ss_dssp GHTGGGESEEEEE-BTHHHHHHTT---------CHHHHHHHHHHHHH-TT-EEEEETTCHHHHHHTTTTTT
T ss_pred HCChhhCCEEEECCCCchhhhHhh---------HHHHHHHHHHHHHH-cCCeEEecCCCcchhhccCccCC
Confidence 345678999999999853333321 13778999999996 79999999999999999999994
|
Examples of annotation are: Catalase A, 1.11.1.6 from EC Catalase II ES-1 DJ-1 RNA-binding protein, regulatory subunit [] protease I FGAM I, 6.3.5.3 from EC Putative/Intracellular protease Chaperone hchA Transcriptional regulator, AraC family THiJ/PfpI family [,] ; PDB: 2FEX_C 1OY1_B 1VHQ_B 3UK7_B 1OI4_A 1QVW_B 1QVV_D 1QVZ_A 1RW7_A 1G2I_C .... |
| >cd03136 GATase1_AraC_ArgR_like AraC transcriptional regulators having an N-terminal Type 1 glutamine amidotransferase (GATase1)-like domain | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0011 Score=72.09 Aligned_cols=96 Identities=17% Similarity=0.171 Sum_probs=66.0
Q ss_pred EEEEecCCCcCHH--HHHHHHHHcC-------CceEEeeccc--cc--Cc--------ccCccCcCEEEEcCCCCchhhh
Q 000572 1147 VAVIREEGSNGDR--EMSAAFYAAG-------FEPWDVTMSD--LI--NG--------AISLDEFRGIVFVGGFSYADVL 1205 (1414)
Q Consensus 1147 VaIl~~~G~n~~~--~~~~Al~~aG-------~~~~~v~~~d--l~--~~--------~~~l~~~dglvlPGG~s~gD~l 1205 (1414)
|+|+.++|++-.. .+...|+.++ +++.++..+. .. .+ ..+..+||.|++|||....
T Consensus 1 i~il~~~g~~~~~~~~~~dv~~~a~~~~~~~~~~v~~vs~~~~~v~~~~g~~i~~d~~~~~~~~~D~liipgg~~~~--- 77 (185)
T cd03136 1 FGFLLLPGFSLLALASAIEPLRAANRLAGRELYRWRVLSLDGAPVTSSNGLRVAPDAALEDAPPLDYLFVVGGLGAR--- 77 (185)
T ss_pred CEEEEeCCCchHHHHHHHHHHHHHHHhcCCcceEEEEEcCCCCeeecCCCcEEeCCccccccCCCCEEEEeCCCCcc---
Confidence 5788888887322 3345555543 6666665431 10 00 0134579999999986421
Q ss_pred hcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCC
Q 000572 1206 DSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGP 1255 (1414)
Q Consensus 1206 ~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~ 1255 (1414)
...++.+.+.|+++.+ +++.|.+||.|.++|+++|++.+.
T Consensus 78 ---------~~~~~~~~~~l~~~~~-~~~~i~aic~g~~~La~aGll~g~ 117 (185)
T cd03136 78 ---------RAVTPALLAWLRRAAR-RGVALGGIDTGAFLLARAGLLDGR 117 (185)
T ss_pred ---------ccCCHHHHHHHHHHHh-cCCEEEEEcHHHHHHHHccccCCC
Confidence 2246778999999985 899999999999999999999843
|
A subgroup of AraC transcriptional regulators having an N-terminal Type 1 glutamine amidotransferase (GATase1)-like domain. This group contains proteins similar to the Pseudomonas aeruginosa ArgR regulator. ArgR functions in the control of expression of certain genes of arginine biosynthesis and catabolism. AraC regulators are defined by a AraC-type helix-turn-helix DNA binding domain at their C-terminal. AraC family transcriptional regulators are widespread among bacteria and are involved in regulating diverse and important biological functions, including carbon metabolism, stress responses and virulence in different microorganisms. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with typical GATase1domains a reactive cys residue is found in some sequences in the sharp turn betwee |
| >KOG2764 consensus Putative transcriptional regulator DJ-1 [General function prediction only; Defense mechanisms] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0009 Score=73.07 Aligned_cols=98 Identities=13% Similarity=0.215 Sum_probs=68.2
Q ss_pred CCEEEEEecCCCcCHH--HHHHHHHHcCCceEEeeccc----------------ccCcccCccCcCEEEEcCCCCchhhh
Q 000572 1144 KPKVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSD----------------LINGAISLDEFRGIVFVGGFSYADVL 1205 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~d----------------l~~~~~~l~~~dglvlPGG~s~gD~l 1205 (1414)
+..+.|+...|+..-+ -+...|++.|.++..+..+. ...+..+ +.||.+|||||.-....|
T Consensus 5 ~~~vlil~~~g~Ee~E~ivp~dVLrr~Gi~Vt~ag~~~~~~vkcs~~v~~~~d~~l~D~~~-~~yDviilPGG~~g~e~L 83 (247)
T KOG2764|consen 5 KKAVLILCADGMEEYEFIVPIDVLRRGGIDVTVAGPNKKEGVKCSRGVHILPDNALFDVVD-SKYDVIILPGGLPGAETL 83 (247)
T ss_pred cccEEEEccCCcceeEEEEeHHHHHhcCceEEEecCCCCcccccccceEecccccchhhcc-ccccEEEecCCchhhhhh
Confidence 4467788776765222 24778999999999887541 1112223 689999999997555554
Q ss_pred hcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhh-HHHHhcCccC
Q 000572 1206 DSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGC-QLMALLGWIP 1253 (1414)
Q Consensus 1206 ~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~-QlL~~lgllp 1253 (1414)
. ..+.+.+.+++|.+ .+++|..||.|. -+|...|+..
T Consensus 84 ~----------~~~~v~~lvK~q~~-~gkLIaaICaap~~al~a~gl~~ 121 (247)
T KOG2764|consen 84 S----------ECEKVVDLVKEQAE-SGKLIAAICAAPLTALAAHGLLG 121 (247)
T ss_pred h----------hcHHHHHHHHHHHh-cCCeEEEeecchHHHHhhccccc
Confidence 4 34567788899985 899999999998 4444446655
|
|
| >KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0022 Score=68.44 Aligned_cols=78 Identities=19% Similarity=0.251 Sum_probs=50.4
Q ss_pred HHHHHHcCCceEEeeccc-ccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEe
Q 000572 1162 SAAFYAAGFEPWDVTMSD-LINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVC 1240 (1414)
Q Consensus 1162 ~~Al~~aG~~~~~v~~~d-l~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC 1240 (1414)
...|..-|-+-...++-+ -.....+|+.|+|+||.|... |+-. ..-|+. .|++.+++... ..++|||||
T Consensus 31 vsllg~ege~wd~frV~~gefP~~~Dl~ky~gfvIsGS~~--dAf~-d~dWI~------KLcs~~kkld~-mkkkvlGIC 100 (245)
T KOG3179|consen 31 VSLLGDEGEQWDLFRVIDGEFPQEEDLEKYDGFVISGSKH--DAFS-DADWIK------KLCSFVKKLDF-MKKKVLGIC 100 (245)
T ss_pred HHHhcccCceeEEEEEecCCCCChhhhhhhceEEEeCCcc--cccc-cchHHH------HHHHHHHHHHh-hccceEEEe
Confidence 334555565544444322 222345789999999999762 3332 223654 35566677664 569999999
Q ss_pred hhhHHHHhc
Q 000572 1241 NGCQLMALL 1249 (1414)
Q Consensus 1241 ~G~QlL~~l 1249 (1414)
.|.|++++.
T Consensus 101 FGHQiiara 109 (245)
T KOG3179|consen 101 FGHQIIARA 109 (245)
T ss_pred ccHHHHHHh
Confidence 999999985
|
|
| >TIGR00302 phosphoribosylformylglycinamidine synthase, purS protein | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.002 Score=60.56 Aligned_cols=67 Identities=9% Similarity=0.092 Sum_probs=55.0
Q ss_pred EEEEecCCCcCChhhhHHHHHHHHcCCCcCCeEEEEEEEEEecCCCC---ChhHHHHHHH-hccccccccc
Q 000572 178 IVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGAL---QDNQINDFAA-MVHDRMTECV 244 (1414)
Q Consensus 178 ~i~v~pr~g~~~~~s~~a~~i~~~~g~~~~~rie~~~~y~~~~~~~~---~~~~~~~~~~-~l~d~mt~~~ 244 (1414)
-|+|+||+|+.||-+..+...++.+|+..|..|..++.|.|...... ..++.+.++. +|+|+.+|..
T Consensus 4 ~I~V~~k~gV~Dp~G~ti~~~l~~lg~~~v~~Vr~~k~~~l~~~~~~~~~a~~~v~~i~~~lL~Npvie~~ 74 (80)
T TIGR00302 4 EVYIRLKKGVLDPEGAAIQRALALLGYNEVKDVRTGKVIELTIEADSEEAVEREVEEMCEKLLANPVIHDY 74 (80)
T ss_pred EEEEEECCCCcChHHHHHHHHHHHcCCCCcceEEEEEEEEEEEcCCChhhHHHHHHHHHHHhcCCceeeEE
Confidence 68999999999999999999999999988999999999999643211 1345666665 8999998865
|
In species such as Bacillus subtilis in which FGAM synthetase is split into two ORFs purL and purQ, this small protein, previously called yexA, is required for FGAM synthetase activity. Although the article does not make it clear whether this is a subunit or an accessory protein, it is encoded as part of the operon, which suggests stochiometric amounts, = subunit. |
| >PRK05974 phosphoribosylformylglycinamidine synthase subunit PurS; Reviewed | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0019 Score=60.64 Aligned_cols=67 Identities=10% Similarity=0.134 Sum_probs=55.4
Q ss_pred EEEEecCCCcCChhhhHHHHHHHHcCCCcCCeEEEEEEEEEecCC---CCChhHHHHHHH-hccccccccc
Q 000572 178 IVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKG---ALQDNQINDFAA-MVHDRMTECV 244 (1414)
Q Consensus 178 ~i~v~pr~g~~~~~s~~a~~i~~~~g~~~~~rie~~~~y~~~~~~---~~~~~~~~~~~~-~l~d~mt~~~ 244 (1414)
-|+|+||+|+.||-+..+...++.+|+.++..+..++.|.|.... ....++.+.++. +|+|+.+|..
T Consensus 4 ~V~V~~k~gv~Dp~G~ai~~~l~~lg~~~v~~Vr~~k~~~l~~~~~~~~~a~~~v~~i~~~lL~Npvie~~ 74 (80)
T PRK05974 4 KVTVTLKEGVLDPQGQAIKGALGSLGYDGVEDVRQGKYFELELEGESEEKAEADLKEMCEKLLANPVIEDY 74 (80)
T ss_pred EEEEEECCCCcChHHHHHHHHHHHcCCCCcceEEEEEEEEEEEcCCchhhhHHHHHHHHHHhcCCceeeEE
Confidence 589999999999999999999999999889999999999998532 122455666665 8999998865
|
|
| >COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0061 Score=72.94 Aligned_cols=93 Identities=16% Similarity=0.208 Sum_probs=69.9
Q ss_pred CCEEEEEecCCCcC-HHHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHH
Q 000572 1144 KPKVAVIREEGSNG-DREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~-~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~ 1222 (1414)
..||||..+.-+|= -.+....|+++|++++..+. |. +++-.+++|+|.||||+- +. +|..+-.|..++
T Consensus 245 ~~rIAVA~D~AF~FyY~~nl~~Lr~~GAelv~FSP--L~-D~~lP~~~D~vYlgGGYP--El------fA~~L~~n~~~~ 313 (451)
T COG1797 245 GVRIAVARDAAFNFYYPENLELLREAGAELVFFSP--LA-DEELPPDVDAVYLGGGYP--EL------FAEELSANESMR 313 (451)
T ss_pred CceEEEEecchhccccHHHHHHHHHCCCEEEEeCC--cC-CCCCCCCCCEEEeCCCCh--HH------HHHHHhhCHHHH
Confidence 36999998877662 23678899999999877752 22 222333699999999983 22 233455677899
Q ss_pred HHHHHHHhCCCCeEEEEehhhHHHHh
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMAL 1248 (1414)
Q Consensus 1223 ~~i~~f~~~~~~piLGIC~G~QlL~~ 1248 (1414)
+.|++|.+ .|+||+|=|-|+--|.+
T Consensus 314 ~~i~~~~~-~G~piyaECGGlMYL~~ 338 (451)
T COG1797 314 RAIKAFAA-AGKPIYAECGGLMYLGE 338 (451)
T ss_pred HHHHHHHH-cCCceEEecccceeehh
Confidence 99999996 99999999999977776
|
|
| >PRK09393 ftrA transcriptional activator FtrA; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0075 Score=71.60 Aligned_cols=99 Identities=20% Similarity=0.213 Sum_probs=66.9
Q ss_pred CCEEEEEecCCCcCHH--HHHHHHHHc----C---CceEEeeccc--cc--------C--cccCccCcCEEEEcCCCCch
Q 000572 1144 KPKVAVIREEGSNGDR--EMSAAFYAA----G---FEPWDVTMSD--LI--------N--GAISLDEFRGIVFVGGFSYA 1202 (1414)
Q Consensus 1144 ~~kVaIl~~~G~n~~~--~~~~Al~~a----G---~~~~~v~~~d--l~--------~--~~~~l~~~dglvlPGG~s~g 1202 (1414)
.++|+|+.++|++... .+...|..+ + |++.+++.+. .. . .-.+++++|.||+|||...
T Consensus 9 ~~~v~ill~~gf~~~~~~~~~dvl~~a~~~~~~~~~~v~~vs~~~~~v~ss~g~~i~~d~~~~~~~~~D~livpGg~~~- 87 (322)
T PRK09393 9 NHLVVALAYDGLCTFEFGCAVEIFGLPRPELGVDWYRFAVAAVEPGPLRAAGGITVVADGGLELLDRADTIVIPGWRGP- 87 (322)
T ss_pred ccEEEEEEcCCCChhHHHHHHHHHHHHHhhcCCCceEEEEEECCCCceEeCCCcEEeCCCCccccCCCCEEEECCCCcc-
Confidence 4589999999998433 234445332 2 3555554421 00 0 0113568999999998531
Q ss_pred hhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCCC
Q 000572 1203 DVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGP 1255 (1414)
Q Consensus 1203 D~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~~ 1255 (1414)
+. ..++.+.+.|+++.+ .+++|.+||.|..+|+++|++.+.
T Consensus 88 ~~-----------~~~~~l~~~l~~~~~-~~~~i~aic~g~~~La~aGlL~~~ 128 (322)
T PRK09393 88 DA-----------PVPEPLLEALRAAHA-RGARLCSICSGVFVLAAAGLLDGR 128 (322)
T ss_pred cc-----------cCCHHHHHHHHHHHH-cCCEEEEEcHHHHHHHhccCCCCC
Confidence 11 125678889999984 899999999999999999999843
|
|
| >KOG1559 consensus Gamma-glutamyl hydrolase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0077 Score=65.79 Aligned_cols=98 Identities=17% Similarity=0.331 Sum_probs=59.3
Q ss_pred CCCCEEEEEecCCCcCH--------H-----HHHHHHHHcCCceEEeecccccC-cccCccCcCEEEEcCCCCc-hhhhh
Q 000572 1142 TSKPKVAVIREEGSNGD--------R-----EMSAAFYAAGFEPWDVTMSDLIN-GAISLDEFRGIVFVGGFSY-ADVLD 1206 (1414)
Q Consensus 1142 ~~~~kVaIl~~~G~n~~--------~-----~~~~Al~~aG~~~~~v~~~dl~~-~~~~l~~~dglvlPGG~s~-gD~l~ 1206 (1414)
..||-|+||.-||-+.. + ++.+-.+..|+.|..+..++-.. -...++-..|+++|||..- +|+..
T Consensus 50 nykPvIGIL~hpg~g~~~rl~n~t~~~yIAASYVK~aEsgGARViPli~nepEe~lfqklelvNGviftGGwak~~dY~~ 129 (340)
T KOG1559|consen 50 NYKPVIGILSHPGDGASGRLKNATGRSYIAASYVKLAESGGARVIPLIYNEPEEILFQKLELVNGVIFTGGWAKRGDYFE 129 (340)
T ss_pred ccCceeEEeccCCCCccceeccccCcchhHHHHHHHHHcCCceEEEEecCCcHHHHHHHHHHhceeEecCcccccccHHH
Confidence 45789999999988711 1 33445566788887776543110 0124667889999999641 33332
Q ss_pred cccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHh
Q 000572 1207 SAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMAL 1248 (1414)
Q Consensus 1207 ~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~ 1248 (1414)
- ....+|. .++++-+-..-|+.|||+||.+|.-
T Consensus 130 v-----vkkifnk----~le~nDaGehFPvyg~CLGFE~lsm 162 (340)
T KOG1559|consen 130 V-----VKKIFNK----VLERNDAGEHFPVYGICLGFELLSM 162 (340)
T ss_pred H-----HHHHHHH----HHhccCCccccchhhhhhhHHHHHH
Confidence 1 1122222 3344432233599999999999875
|
|
| >PF13278 DUF4066: Putative amidotransferase; PDB: 3BHN_A 3MGK_B 3NOV_A 3NON_B 3NOO_B 3NOQ_A 3NOR_A 3GRA_A 3EWN_A 3ER6_C | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.005 Score=65.76 Aligned_cols=56 Identities=23% Similarity=0.430 Sum_probs=44.6
Q ss_pred ccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhcCccCC
Q 000572 1187 LDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPG 1254 (1414)
Q Consensus 1187 l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~lgllp~ 1254 (1414)
..++|.|++|||....+ ...++.+.+.++++. ++++++.+||.|..+|+++|++.+
T Consensus 59 ~~~~D~lvvpg~~~~~~-----------~~~~~~l~~~l~~~~-~~~~~i~aic~G~~~La~aGlL~g 114 (166)
T PF13278_consen 59 APDFDILVVPGGPGFDA-----------AAKDPALLDWLRQQH-AQGTYIAAICTGALLLAEAGLLDG 114 (166)
T ss_dssp CSCCSEEEEE-STTHHH-----------HTT-HHHHHHHHHHH-CCTSEEEEETTHHHHHHHTTTTTT
T ss_pred cccCCEEEeCCCCCchh-----------cccCHHHHHHhhhhh-ccceEEeeeehHHHHHhhhhccCc
Confidence 56799999999996111 234567888898888 488999999999999999999994
|
... |
| >PRK05282 (alpha)-aspartyl dipeptidase; Validated | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0087 Score=67.54 Aligned_cols=95 Identities=17% Similarity=0.207 Sum_probs=67.7
Q ss_pred CCCEEEEEecCCCcCH-----HHHHHHHHHcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhh
Q 000572 1143 SKPKVAVIREEGSNGD-----REMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRF 1217 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n~~-----~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~ 1217 (1414)
.++||++|-.-+...+ ....++|++.|+++..++..+- ....|.++|+|+++||-++ . ..+.++
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d--~~~~l~~ad~I~v~GGnt~--~-------l~~~l~ 98 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVAD--PVAAIENAEAIFVGGGNTF--Q-------LLKQLY 98 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchh--hHHHHhcCCEEEECCccHH--H-------HHHHHH
Confidence 4567887754432212 2467899999999888864321 1234889999999998753 1 123556
Q ss_pred cchHHHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1218 NQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1218 ~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
..++.+.|+++++ +|+|++|+|.|.-+++..
T Consensus 99 ~~gl~~~l~~~~~-~G~~~~G~SAGAii~~~~ 129 (233)
T PRK05282 99 ERGLLAPIREAVK-NGTPYIGWSAGANVAGPT 129 (233)
T ss_pred HCCcHHHHHHHHH-CCCEEEEECHHHHhhhcc
Confidence 6778899999985 899999999999887764
|
|
| >PF02700 PurS: Phosphoribosylformylglycinamidine (FGAM) synthase; InterPro: IPR003850 Phosphoribosylformylglycinamidine(FGAM) synthetase, 6 | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.025 Score=53.13 Aligned_cols=67 Identities=12% Similarity=0.082 Sum_probs=48.5
Q ss_pred EEEEecCCCcCChhhhHHHHHHHHcCCCcCCeEEEEEEEEEecCCCC---ChhHHHHHHH-hccccccccc
Q 000572 178 IVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGAL---QDNQINDFAA-MVHDRMTECV 244 (1414)
Q Consensus 178 ~i~v~pr~g~~~~~s~~a~~i~~~~g~~~~~rie~~~~y~~~~~~~~---~~~~~~~~~~-~l~d~mt~~~ 244 (1414)
.|+|.||+|+.||-+....+.++.+|..+|..|..|+.|.|.....- ..++.+.++. +|.|+.+|..
T Consensus 4 ~V~V~~K~gvlDPqG~ai~~al~~lG~~~v~~Vr~GK~~~l~~~~~~~e~a~~~v~~i~~~LLaNpvie~y 74 (80)
T PF02700_consen 4 RVEVTLKPGVLDPQGEAIKRALHRLGYDGVKDVRVGKYIELELEADDEEEAEEQVEEICEKLLANPVIEDY 74 (80)
T ss_dssp EEEEEE-TTS--HHHHHHHHHHHHTT-TTEEEEEEEEEEEEEEE-SSHHHHHHHHHHHHHHTTS-TTTEEE
T ss_pred EEEEEECCCCcCcHHHHHHHHHHHcCCcccCcEEEEEEEEEEEeCCCHHHHHHHHHHHHHHhcCCCceEEE
Confidence 58999999999999999999999999999999999999999754331 1234455544 7888887754
|
3.5.3 from EC, catalyses the fourth step in the de novo purine biosynthetic pathway []. |
| >COG4285 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.32 Score=53.12 Aligned_cols=186 Identities=19% Similarity=0.236 Sum_probs=99.4
Q ss_pred CEEEEEecCCCcCHHHHHHHHHHc---C---CceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhc
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAA---G---FEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFN 1218 (1414)
Q Consensus 1145 ~kVaIl~~~G~n~~~~~~~Al~~a---G---~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~ 1218 (1414)
|+|.|....|+. ...+.++++-. - +++..|.-+.|...+ =.+.-..||+|||-. .+-. +.+ +
T Consensus 1 m~VlVYn~~GvS-p~~lkhtv~sLr~~~~p~y~v~~V~~~~Li~Ep-W~~~T~lLV~pGGaD---lpY~------~~l-~ 68 (253)
T COG4285 1 MNVLVYNGLGVS-PYSLKHTVRSLRLFAPPYYAVDRVDAQFLIKEP-WEETTLLLVFPGGAD---LPYV------QVL-Q 68 (253)
T ss_pred CceEEeCCCCCC-hHHHHHHHHHHHhhccchheEEEeeeheeecCc-chhceEEEEecCCCC---chHH------HHh-c
Confidence 578899888887 44444444322 1 345555544454433 334567999999973 2210 011 2
Q ss_pred chHHHHHHHHHhCCCCeEEEEehhhHHHH-----------------hcCccCCCCCCCccCCCCCCCCCeeeecCCCceE
Q 000572 1219 QPLLNQFQEFYKRPDTFSLGVCNGCQLMA-----------------LLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFE 1281 (1414)
Q Consensus 1219 ~~l~~~i~~f~~~~~~piLGIC~G~QlL~-----------------~lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe 1281 (1414)
.-....|..++ +.|+-.||||.|--.=. +||+.| |+. .....+.+..|...-
T Consensus 69 g~g~a~i~~yv-k~GG~fLGiCAG~YFg~~~veF~~p~~~~vvgkRdL~fFp---GT~-----~GP~y~gF~Y~S~~G-- 137 (253)
T COG4285 69 GLGTARIKNYV-KEGGNFLGICAGGYFGSAYVEFAEPTGIEVVGKRDLGFFP---GTA-----RGPAYAGFSYNSESG-- 137 (253)
T ss_pred chhhhhHHHHH-hcCCeEEEEeccccccceEEEEecCCCceeeecccccccC---Ccc-----CCCccCCccccCccc--
Confidence 22334566777 58999999998742211 145555 321 112344466664221
Q ss_pred EeeEEEEEccCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhhcCceEEEEecCCCCCcccCCCCCCCCcCceeE
Q 000572 1282 CRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAA 1361 (1414)
Q Consensus 1282 ~r~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~yp~NPnGs~~~iag 1361 (1414)
.|-+.+.++ ++.+. .+..+.+| -+|-+.+. ..+-.|.+||.|.+|.|+ +|--
T Consensus 138 aRaa~l~~~--------d~~~~-~~~~FNGG---~~F~~aE~----~~~v~I~ArY~e~~~~pA------------AIV~ 189 (253)
T COG4285 138 ARAAPLKFN--------DFLGD-CYAYFNGG---GYFEDAEN----YPNVEIEARYEELPGKPA------------AIVS 189 (253)
T ss_pred ceeeeeeeC--------CCccc-eEEEEcCc---eEEeccCC----CCCcEEEEehhcCCCCce------------eEEE
Confidence 134444442 23222 22224443 23433332 234578899988665441 2333
Q ss_pred EEcCCCcEEEEccCCccccc
Q 000572 1362 ICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1362 i~s~dGrvlg~m~HPEr~~~ 1381 (1414)
.+=-+|.++=.-||||=..+
T Consensus 190 ~~vgkG~vvLsGpH~Ey~p~ 209 (253)
T COG4285 190 CTVGKGLVVLSGPHPEYLPE 209 (253)
T ss_pred EEecCccEEEecCChhhchh
Confidence 33348999999999995544
|
|
| >KOG0026 consensus Anthranilate synthase, beta chain [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.24 Score=51.64 Aligned_cols=89 Identities=22% Similarity=0.211 Sum_probs=49.4
Q ss_pred CCCEEEEEecCCCcCHHHHHHHH-HHcCCceEEeeccc-ccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcch
Q 000572 1143 SKPKVAVIREEGSNGDREMSAAF-YAAGFEPWDVTMSD-LINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQP 1220 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n~~~~~~~Al-~~aG~~~~~v~~~d-l~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~ 1220 (1414)
.+| |.+|..|.+..- .+..-| -+.|+.+.+.. +| +.-.+-.-..-++|+|.=|...+. ++|-
T Consensus 18 n~p-iv~IDNYDSFT~-Nv~qYL~~e~g~~~~VyR-NDeiTV~El~~~NP~~LliSPGPG~P~--DsGI----------- 81 (223)
T KOG0026|consen 18 NGP-IIVIDNYDSFTY-NLCQYLMGELGCHFEVYR-NDELTVEELKRKNPRGLLISPGPGTPQ--DSGI----------- 81 (223)
T ss_pred cCC-EEEEecccchhH-HHHHHhhhccCccEEEEe-cCcccHHHHhhcCCCeEEecCCCCCCc--cccc-----------
Confidence 455 555656655422 222233 35576655444 32 221111112356777766654333 3331
Q ss_pred HHHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1221 LLNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1221 l~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
-++.+.+|. ...|++|||.|.|-+++.
T Consensus 82 s~~~i~~f~--~~iP~fGvCMGlQCi~e~ 108 (223)
T KOG0026|consen 82 SLQTVLELG--PLVPLFGVCMGLQCIGEA 108 (223)
T ss_pred hHHHHHHhC--CCCceeeeehhhhhhhhh
Confidence 245677775 679999999999999985
|
|
| >cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.15 Score=56.83 Aligned_cols=97 Identities=24% Similarity=0.256 Sum_probs=67.6
Q ss_pred CCCEEEEEecCCCc---CHHHHHHHHHHcCCceEEeecccccCc---ccCccCcCEEEEcCCCCchhhhhcccchhHHHh
Q 000572 1143 SKPKVAVIREEGSN---GDREMSAAFYAAGFEPWDVTMSDLING---AISLDEFRGIVFVGGFSYADVLDSAKGWSASIR 1216 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n---~~~~~~~Al~~aG~~~~~v~~~dl~~~---~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l 1216 (1414)
..+||++|-..... .-..+.++|++.|+++..+...+.... ...|.++|+|+++||-.+ .. .+.+
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~-~~--------~~~l 98 (210)
T cd03129 28 AGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQL-RL--------LSVL 98 (210)
T ss_pred CCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHH-HH--------HHHH
Confidence 35788888544422 123567899999999887764321111 235889999999997631 12 2244
Q ss_pred hcchHHHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1217 FNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1217 ~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
++.++.+.|.+.++ +|+++.|+|.|..+|++.
T Consensus 99 ~~t~~~~~i~~~~~-~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 99 RETPLLDAILKRVA-RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HhCChHHHHHHHHH-cCCeEEEcCHHHHHhhhc
Confidence 55567888888886 899999999999999984
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from |
| >PF06283 ThuA: Trehalose utilisation; PDB: 4E5V_A 1T0B_A | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.74 Score=51.53 Aligned_cols=183 Identities=16% Similarity=0.130 Sum_probs=88.5
Q ss_pred HHHHH-HcCCceEEeecccccCcccCccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEe
Q 000572 1162 SAAFY-AAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVC 1240 (1414)
Q Consensus 1162 ~~Al~-~aG~~~~~v~~~dl~~~~~~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC 1240 (1414)
...++ ..|+++....-.+.. ....|++||.||+...+ +|.+. ..-+++|++|++ .|+.++||.
T Consensus 25 ~~ll~~~~~~~v~~~~~~~~~-~~~~L~~~Dvvv~~~~~--~~~l~------------~~~~~al~~~v~-~Ggglv~lH 88 (217)
T PF06283_consen 25 AQLLEESEGFEVTVTEDPDDL-TPENLKGYDVVVFYNTG--GDELT------------DEQRAALRDYVE-NGGGLVGLH 88 (217)
T ss_dssp HHHHHHTTCEEEEECCSGGCT-SHHCHCT-SEEEEE-SS--CCGS-------------HHHHHHHHHHHH-TT-EEEEEG
T ss_pred HHHhccCCCEEEEEEeCcccC-ChhHhcCCCEEEEECCC--CCcCC------------HHHHHHHHHHHH-cCCCEEEEc
Confidence 33444 457776654311111 23469999999999877 33332 345778999996 899999998
Q ss_pred hhhHHHHh-----cCccCCCCCCCccCCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEEEEEEeeccce
Q 000572 1241 NGCQLMAL-----LGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGR 1315 (1414)
Q Consensus 1241 ~G~QlL~~-----lgllp~~~g~~~~~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr 1315 (1414)
.+.-.-.. ..++. |.- ..+. .-.-..+++.....|.++|+. ..+. .-.|
T Consensus 89 ~~~~~~~~~~~~~~~l~G---g~f------------~~h~-----~~~~~~v~~~~~~HPi~~gl~-~~f~---~~DE-- 142 (217)
T PF06283_consen 89 GAATDSFPDWPEYNELLG---GYF------------KGHP-----PPQPFTVRVEDPDHPITRGLP-ESFT---IYDE-- 142 (217)
T ss_dssp GGGGCCHTT-HHHHHHHS-----S------------EEEE-----CEEEEEEEESSTTSCCCTTS--SEEE---EEEE--
T ss_pred ccccccchhHHHHHHeeC---ccc------------cCCC-----CCceEEEEEcCCCChhhcCCC-CCce---Eccc--
Confidence 33211000 01232 110 0011 011235556567789999993 3333 2223
Q ss_pred EEeCChhhHHHHhhcCceEEEEecCCCCCcccC-CCCCCCCcCceeEEEcC-CCcEEEEcc-CCccccccccCCCCCCCC
Q 000572 1316 AYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVY-PFNVNGSPLGVAAICSP-DGRHLAMMP-HPERCFLMWQYPWYPKNW 1392 (1414)
Q Consensus 1316 ~~~~~~~~~~~l~~~~~i~~~Y~d~~g~~~~~y-p~NPnGs~~~iagi~s~-dGrvlg~m~-HPEr~~~~~q~~~~p~~~ 1392 (1414)
.|+... .. ..+-.+.++. +. ..| |....|...-|+-.... +|||+.+.+ |.++++..
T Consensus 143 ~Y~~~~-~~---~~~~~vL~~~-~~-----~~~~~~~~~~~~~Pv~W~~~~GkGRvf~~~lGH~~~~~~~---------- 202 (217)
T PF06283_consen 143 WYYFLR-DP---RPNVTVLLTA-DE-----SSYDPEGGEGGDHPVAWTREYGKGRVFYTTLGHDEETWED---------- 202 (217)
T ss_dssp EEES-B-S------CEEEEEEE-E-------GGG--TTTSSEEEEEEEEECTTEEEEEE----TTSHHHB----------
T ss_pred cccccc-CC---CCCEEEEEEE-Ee-----ccccccccCCCeEEEEEEEEeCCeeEEEECCCCChhhcCC----------
Confidence 222111 00 0112344433 21 011 11122332334444443 379988766 98775541
Q ss_pred CCCCCCCChhHHHHHHHHHhh
Q 000572 1393 NVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1393 ~~~~~~~spw~~~F~na~~~~ 1413 (1414)
-..++++.|++.|+
T Consensus 203 -------~~~~~ll~ngi~Wa 216 (217)
T PF06283_consen 203 -------PDFRRLLRNGIRWA 216 (217)
T ss_dssp -------HHHHHHHHHHHHHC
T ss_pred -------HHHHHHHHHHHHhh
Confidence 26899999999997
|
|
| >PF04204 HTS: Homoserine O-succinyltransferase ; InterPro: IPR005697 This family of enzymes, homoserine O-succinyltransferase, catalyses the first step in the biosynthesis of methionine: |
Back alignment and domain information |
|---|
Probab=91.36 E-value=0.84 Score=53.19 Aligned_cols=138 Identities=25% Similarity=0.349 Sum_probs=68.1
Q ss_pred cCcCEEEEcCCCC----chhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHH-HHhc-CccCCCCCCCcc
Q 000572 1188 DEFRGIVFVGGFS----YADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQL-MALL-GWIPGPQVGGVH 1261 (1414)
Q Consensus 1188 ~~~dglvlPGG~s----~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~Ql-L~~l-gllp~~~g~~~~ 1261 (1414)
+.|||+|+.|-.- |.|+-= | +.+. .|.++.++.-+..|.||-|-|. |... |+=. -
T Consensus 97 ~~~DglIITGAPvE~l~Fe~V~Y----W-------~El~-~i~dwa~~~v~stl~iCWgAqAaLy~~yGI~K---~---- 157 (298)
T PF04204_consen 97 RKFDGLIITGAPVEQLPFEEVDY----W-------DELT-EIFDWAKTHVTSTLFICWGAQAALYHFYGIPK---Y---- 157 (298)
T ss_dssp S-EEEEEE---TTTTS-GGGSTT----H-------HHHH-HHHHHHHHHEEEEEEETHHHHHHHHHHH-------E----
T ss_pred CCCCEEEEeCCCcCCCCcccCCc----H-------HHHH-HHHHHHHHcCCcchhhhHHHHHHHHHHcCCCc---c----
Confidence 4699999999772 222110 1 1111 2334444455899999999998 4443 5532 0
Q ss_pred CCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHH-hhcCceEEEEecC
Q 000572 1262 GAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRI-LHSHLAPVRYCDD 1340 (1414)
Q Consensus 1262 ~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l-~~~~~i~~~Y~d~ 1340 (1414)
.+-+=-+|-| .-++....+|+++|++ ..+.+ -|+ |+.--+. +++ ...+...+...+.
T Consensus 158 ---------~l~~KlfGVf-----~~~~~~~~~pLl~Gfd-d~f~~--PhS--R~t~i~~---~~i~~~~~L~vLa~s~~ 215 (298)
T PF04204_consen 158 ---------PLPEKLFGVF-----EHRVLDPDHPLLRGFD-DTFFA--PHS--RYTEIDR---DDIKKAPGLEVLAESEE 215 (298)
T ss_dssp ---------EEEEEEEEEE-----EEEES-SS-GGGTT---SEEEE--EEE--EEEE--H---HHHCT-TTEEEEEEETT
T ss_pred ---------cCCCcceece-----eeeccCCCChhhcCCC-ccccC--Ccc--cccCCCH---HHHhcCCCcEEEeccCC
Confidence 1223334444 3344456799999995 45664 455 3332222 344 3334445555331
Q ss_pred CCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccccc
Q 000572 1341 DGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLM 1382 (1414)
Q Consensus 1341 ~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~ 1382 (1414)
.++.-+.|+|||.+=++.|||=-..+
T Consensus 216 ----------------~G~~l~~~~d~r~vfi~GH~EYd~~T 241 (298)
T PF04204_consen 216 ----------------AGVFLVASKDGRQVFITGHPEYDADT 241 (298)
T ss_dssp ----------------TEEEEEEECCCTEEEE-S-TT--TTH
T ss_pred ----------------cceEEEEcCCCCEEEEeCCCccChhH
Confidence 24677788999999999999965544
|
Since they are not found in humans, they make a promising new target for antimicrobial drug development. Homoserine O-succinyltransferase (HST) is a representative from this class and has recently had the key amino acids involved in substrate specificity and catalysis elucidated [].; GO: 0016746 transferase activity, transferring acyl groups, 0019281 L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine, 0005737 cytoplasm; PDB: 2H2W_A 2GHR_A 2VDJ_A. |
| >PRK05783 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.95 Score=42.94 Aligned_cols=67 Identities=3% Similarity=-0.096 Sum_probs=51.4
Q ss_pred EEEEecCCCcCChhhhHHHHHHHHcCCCcCCeEEEEEEEEEecCCCCC---hhHHHHHHH-h-ccccccccc
Q 000572 178 IVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQ---DNQINDFAA-M-VHDRMTECV 244 (1414)
Q Consensus 178 ~i~v~pr~g~~~~~s~~a~~i~~~~g~~~~~rie~~~~y~~~~~~~~~---~~~~~~~~~-~-l~d~mt~~~ 244 (1414)
-|.|.+|+|+.||-+......++.+|+..|..+..|+.|.|..+.... .++.+.++. + |.|+.+|..
T Consensus 6 ~V~V~lK~gVlDPqG~aI~~aL~~lg~~~V~~VRvGK~iel~l~~~~~e~a~~~v~~mc~~LrLaNpVIe~y 77 (84)
T PRK05783 6 ELIIINKDSVRDPEGETIQRYVIERYTGNIIEVRAGKYLVFKIEANSPEEAKELALKIAREGRLYNPIVHKI 77 (84)
T ss_pred EEEEEECCCCcCchHHHHHHHHHHcCCCCcceEEeeEEEEEEEcCCCHHHHHHHHHHHHHhcCcCCceeEEE
Confidence 578999999999999988889989999999999999999887533211 233444443 5 788877753
|
|
| >cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS) | Back alignment and domain information |
|---|
Probab=91.03 E-value=0.79 Score=49.63 Aligned_cols=54 Identities=19% Similarity=0.279 Sum_probs=34.6
Q ss_pred CccCcCEEEEcCCCCchhhhhccc--chhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1186 SLDEFRGIVFVGGFSYADVLDSAK--GWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1186 ~l~~~dglvlPGG~s~gD~l~~g~--~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
....|||+|+.|... +.+.-.. -| +. ...+.++.++..+++|+||-|.|+....
T Consensus 59 ~~~~yDGlIITGApv--e~~~fe~v~Yw-------~E-l~~i~dwa~~~v~stl~iCWgaqaal~~ 114 (175)
T cd03131 59 RDAKFDGLIVTGAPV--EHLPFEQVDYW-------EE-LTEILDWAKTHVTSTLFSCWAAMAALYY 114 (175)
T ss_pred cccCCCEEEEeCCCc--ccCCccccchH-------HH-HHHHHHHHHHhCcchHHHHHHHHHHHHH
Confidence 457899999999874 1111000 01 12 2234456656889999999999996653
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti |
| >COG1828 PurS Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.49 E-value=1.2 Score=41.95 Aligned_cols=66 Identities=11% Similarity=0.086 Sum_probs=50.2
Q ss_pred EEEEecCCCcCChhhhHHHHHHHHcCCCcCCeEEEEEEEEEecCCC-C--ChhHHHHHHH-hcccccccc
Q 000572 178 IVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGA-L--QDNQINDFAA-MVHDRMTEC 243 (1414)
Q Consensus 178 ~i~v~pr~g~~~~~s~~a~~i~~~~g~~~~~rie~~~~y~~~~~~~-~--~~~~~~~~~~-~l~d~mt~~ 243 (1414)
.|.|.+|+|+.||-+......++.+|...|..+..++.|.|..+.. . .++++..+.. +|.|+.+|.
T Consensus 5 ~V~V~lK~~VlDPqG~ti~~aL~~lg~~~V~~vR~gK~~el~ld~~~~e~a~~~v~~mcekLLaNpVIe~ 74 (83)
T COG1828 5 RVYVTLKPGVLDPEGETIEKALHRLGYNEVSDVRVGKVIELELDAESEEKAEEEVKEMCEKLLANPVIED 74 (83)
T ss_pred EEEEEeCCcccCchhHHHHHHHHHcCCcccceeeeeeEEEEEecCcchhHHHHHHHHHHHHHhCCCceeE
Confidence 6889999999999999999999999999999999999999975432 1 1233333333 666665553
|
|
| >PRK06423 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=90.18 E-value=1.4 Score=40.69 Aligned_cols=57 Identities=16% Similarity=0.265 Sum_probs=47.2
Q ss_pred EEcCCCCCCHHHHHHHHHHHHhhhCCC-cceEEEEEEEEEecCCCCCHHHHHHHH-HHhcccC
Q 000572 95 HFYRIPLLQDSAAAELLKSVQKKISNQ-IVGLKTEHCFNIGLDSRISTKKLEVLK-WLLQETY 155 (1414)
Q Consensus 95 ~~~g~~als~~~~e~Ll~~l~~~~~~~-V~~v~t~~~y~v~~~~~Ls~~~~~~l~-~LL~~~~ 155 (1414)
...-+|...|++++.+++.|+. ++.+ |.+|++-++|.++ + +++++.+.+. .||++|.
T Consensus 6 ~V~~k~gv~Dp~G~ti~~~l~~-lg~~~v~~Vr~~k~~~l~--~-~~~~~~~~i~~~lL~Npv 64 (73)
T PRK06423 6 EVTYKPGVEDPEALTILKNLNI-LGYNGIKGVSISKVYYFD--A-DSYNEVDEIAGKILTNPV 64 (73)
T ss_pred EEEECCCCcChHHHHHHHHHHH-cCCCCcceEEEEEEEEEe--c-CCHHHHHHHHHHhcCCce
Confidence 3335889999999999999999 4775 9999999999995 3 7888888886 6887753
|
|
| >COG3155 ElbB Uncharacterized protein involved in an early stage of isoprenoid biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=88.66 E-value=1.1 Score=46.76 Aligned_cols=63 Identities=16% Similarity=0.181 Sum_probs=41.3
Q ss_pred CccCcCEEEEcCCCCchhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1186 SLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1186 ~l~~~dglvlPGG~s~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
+.+++|+|++||||...-.+.--+.--+.-.-++.+....+.|.+ .|||+-=||...-||-+.
T Consensus 82 ~~e~~DALivPGGFGAAKNLsdFA~kGaeC~v~pDv~al~~a~~~-agKP~G~iCIaP~m~pki 144 (217)
T COG3155 82 DAEELDALIVPGGFGAAKNLSDFASKGAECSVDPDLKALAQAMHQ-AGKPLGFMCIAPAMLPKI 144 (217)
T ss_pred CHHhcceeeccCccchhhhhHHHhccCccceeCHHHHHHHHHHHH-hCCCceEEEecHHHHHHH
Confidence 456799999999995322221000000012235667777788884 999999999999988874
|
|
| >PF12818 Tegument_dsDNA: dsDNA viral tegument protein; InterPro: IPR024346 This entry represents the N-terminal domain of tegument proteins from double-stranded DNA herpesvirus | Back alignment and domain information |
|---|
Probab=88.52 E-value=17 Score=42.50 Aligned_cols=184 Identities=13% Similarity=0.120 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHhCCcccccccccccccccCCceeecCCcEEEEEEEEcCCCCcccCCCccCCCCcEEEEEEcCCCccc
Q 000572 868 YDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRR 947 (1414)
Q Consensus 868 ~~~~~gl~eac~~lGv~ivGGk~S~s~~~~~~~~~v~~pptlvita~G~v~d~~~~lt~~~k~~Gd~~li~v~lg~~~~~ 947 (1414)
..++++=.+..+..|+|++||=.-..+.. .. ..+....+...+..+.+.. ..++..-.++|+ .++.+ |.-...
T Consensus 61 ~~~l~aq~~~l~~~GvPv~~GF~R~i~~~-~~-~~~~~~~~~~~s~l~~~~~--~~l~~~~~~~g~-~iv~L--G~F~p~ 133 (282)
T PF12818_consen 61 TTALQAQARSLNASGVPVVGGFIRPIDSH-LS-GPVPLNVLTFTSILGSISQ--TNLNTARPRPGQ-YIVCL--GDFEPT 133 (282)
T ss_pred HHHHHHHHHHHhhcCCCccCcEeEEecCc-cc-ccccCceEEEEEEEcccch--hhhhccCCCCCC-EEEEe--cCCccc
Confidence 34566666889999999999965332210 00 0111122223334444432 223333345786 45554 531111
Q ss_pred cchHHHHHHhhhcCCCCCCC--CChHHHHHHHHHHHHHH---hccCc-eEEEeCCCCchHHHHHHHHhcCCeEEEEEeCC
Q 000572 948 LGGSALAQVFDQVGNESPDL--EDVPYLKRVFETVQDLI---GDELV-STGHDISDGGLLVCTLEMSFAGNYGITLDLNS 1021 (1414)
Q Consensus 948 LGGS~la~~~~~~~~~~p~v--~d~~~lk~~~~~v~~l~---~~g~v-~A~hDiSdGGL~~aL~EMa~as~~G~~Idl~~ 1021 (1414)
.+ .+..|-. +......++..+++.+. ...-| .+..+....=+...|.+.+. ..|+.|+++.
T Consensus 134 ---------~~--~d~~p~~y~dS~~~~~~i~~aL~~f~~~~~~~cis~~~r~~~~~sv~~~L~aL~~--~~G~~l~lS~ 200 (282)
T PF12818_consen 134 ---------PG--PDTPPYTYRDSGLEQNKILQALQQFYSTLESPCISGSIRPPGPASVKEHLLALCH--PGGARLDLSA 200 (282)
T ss_pred ---------CC--CCCCCcccccCHHHHHHHHHHHHHHHHhcCCCcEEeecCCCCchhHHHHHHHhcC--CCceEEEhhc
Confidence 11 1112211 12334455555555443 33333 33344444445556666654 6999999987
Q ss_pred CCCch--------------H-----HHhcccccc-eEEEEecCC-----------HHHHHHHHHHcCCCEEEEEEEeCCC
Q 000572 1022 EGNSL--------------F-----QTLFAEELG-LVLEVSKSN-----------LDTVSKKLHDAGVSAEIIGQVNSSH 1070 (1414)
Q Consensus 1022 ~~~~~--------------~-----~~LFsE~~G-~vl~V~~~~-----------~~~v~~~l~~~gi~~~~IG~v~~~~ 1070 (1414)
.|.+. . ..+|+-..- +.+.|+.+. .+.++++++.+|+++.+||+++++.
T Consensus 201 LP~~i~~~L~~~~~~~~~~~~~~i~~~FLNv~~~~vfl~V~n~~~~~~~~~~~~~l~~L~~~c~~~gc~~~iLG~t~~~~ 280 (282)
T PF12818_consen 201 LPQEIVSQLKRSPPENREHNEEIIKQHFLNVYCSVVFLVVSNTPIDTNTDQGFGPLDALKRACRLCGCPVHILGRTCPEP 280 (282)
T ss_pred CCHHHHHHhccCCchhHHHHHHHHHhhhhccccceEEEEEecCCCCCcccccccHHHHHHHHHHHCCCCEEEEeeeccCC
Confidence 53111 1 113333333 344554433 2678888899999999999998765
Q ss_pred c
Q 000572 1071 S 1071 (1414)
Q Consensus 1071 ~ 1071 (1414)
+
T Consensus 281 G 281 (282)
T PF12818_consen 281 G 281 (282)
T ss_pred C
Confidence 4
|
|
| >TIGR01001 metA homoserine O-succinyltransferase | Back alignment and domain information |
|---|
Probab=86.02 E-value=2.3 Score=49.44 Aligned_cols=135 Identities=23% Similarity=0.360 Sum_probs=74.3
Q ss_pred cCcCEEEEcCCCC----chhhhhcccchhHHHhhcchHHHHHHHHHhCCCCeEEEEehhhHH-HHhc-CccCCCCCCCcc
Q 000572 1188 DEFRGIVFVGGFS----YADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQL-MALL-GWIPGPQVGGVH 1261 (1414)
Q Consensus 1188 ~~~dglvlPGG~s----~gD~l~~g~~~a~~~l~~~~l~~~i~~f~~~~~~piLGIC~G~Ql-L~~l-gllp~~~g~~~~ 1261 (1414)
..|||+|+.|-.- |.|+-= | +.+ ..|.++.++.-+..|.||-|-|. |-.. |+=...
T Consensus 98 ~~fDGlIITGAPvE~l~FeeV~Y----W-------~El-~~I~dwsk~~v~Stl~iCWaAqAaLy~~yGI~K~~------ 159 (300)
T TIGR01001 98 RKFDGLIITGAPVELVPFEDVAY----W-------EEL-TEIMEWSKHNVTSTMFICWAAQAGLKYFYGIPKYT------ 159 (300)
T ss_pred CCCCEEEEcCCCcCCCCcccCCc----H-------HHH-HHHHHHHHHcCcchHHHHHHHHHHHHHHcCCCccc------
Confidence 5699999999772 222110 1 111 23445555566899999999987 3333 553310
Q ss_pred CCCCCCCCCeeeecCCCceEEeeEEEEEccCCCccccCCCCcEEEEEEeeccceEEeCChhhHHHHhh-cCceEEEEecC
Q 000572 1262 GAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILH-SHLAPVRYCDD 1340 (1414)
Q Consensus 1262 ~~~~~~~~p~l~~N~s~~fe~r~v~v~i~~~~s~~l~g~~g~~~~~~~~HgeGr~~~~~~~~~~~l~~-~~~i~~~Y~d~ 1340 (1414)
+-.=-+|-|+.+ +. .++|+++|++ +.+.+ -|+ |+.--+. +.+.+ .+...+.+.+
T Consensus 160 ----------l~~KlfGVf~h~-----~~-~~~pL~rGfd-d~f~~--PhS--R~t~i~~---~~i~~~~~L~vla~s~- 214 (300)
T TIGR01001 160 ----------LPEKLSGVYKHD-----IA-PDSLLLRGFD-DFFLA--PHS--RYADFDA---EDIDKVTDLEILAESD- 214 (300)
T ss_pred ----------cCCceEEeecCc-----cC-CCCccccCCC-Ccccc--CCC--CCCCCCH---HHHhcCCCCeEEecCC-
Confidence 111123333221 22 4689999996 45553 455 2211122 23333 2333444322
Q ss_pred CCCCcccCCCCCCCCcCceeEEEcCCCcEEEEccCCcccc
Q 000572 1341 DGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCF 1380 (1414)
Q Consensus 1341 ~g~~~~~yp~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~ 1380 (1414)
..++.-+.|+|+|.+=++.|||=-.
T Consensus 215 ---------------e~G~~l~~s~d~r~vfi~GH~EYd~ 239 (300)
T TIGR01001 215 ---------------EAGVYLAANKDERNIFVTGHPEYDA 239 (300)
T ss_pred ---------------CcceEEEEcCCCCEEEEcCCCccCh
Confidence 1246778889999999999999543
|
The apparent equivalog from Bacillus subtilis is broken into two tandem reading frames. |
| >cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase | Back alignment and domain information |
|---|
Probab=85.20 E-value=2.6 Score=47.32 Aligned_cols=97 Identities=21% Similarity=0.292 Sum_probs=66.1
Q ss_pred CCCEEEEEecCCCc---CHHHHHHHHHHcCCc-eEEeecccc--cCc---ccCccCcCEEEEcCCCCchhhhhcccchhH
Q 000572 1143 SKPKVAVIREEGSN---GDREMSAAFYAAGFE-PWDVTMSDL--ING---AISLDEFRGIVFVGGFSYADVLDSAKGWSA 1213 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n---~~~~~~~Al~~aG~~-~~~v~~~dl--~~~---~~~l~~~dglvlPGG~s~gD~l~~g~~~a~ 1213 (1414)
..+||++|...+.. .-.++..+|++.|+. +..+++.+. ... ...+.++|+|++.||--+ .+ .
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~v~~~~~~~~~~a~~~~~~~~l~~ad~I~~~GG~~~--~~-------~ 98 (217)
T cd03145 28 AGARIVVIPAASEEPAEVGEEYRDVFERLGAREVEVLVIDSREAANDPEVVARLRDADGIFFTGGDQL--RI-------T 98 (217)
T ss_pred CCCcEEEEeCCCcChhHHHHHHHHHHHHcCCceeEEeccCChHHcCCHHHHHHHHhCCEEEEeCCcHH--HH-------H
Confidence 35788888665432 122467889999995 555555421 111 235788999999998631 11 2
Q ss_pred HHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHhc
Q 000572 1214 SIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1214 ~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~l 1249 (1414)
..+++.++.+.|++.++ +|+++.|+-.|.-++...
T Consensus 99 ~~l~~t~l~~~l~~~~~-~G~v~~G~SAGA~i~~~~ 133 (217)
T cd03145 99 SALGGTPLLDALRKVYR-GGVVIGGTSAGAAVMSDT 133 (217)
T ss_pred HHHcCChHHHHHHHHHH-cCCEEEEccHHHHhhhhc
Confidence 35556678889999885 899999999999887763
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. |
| >PRK05974 phosphoribosylformylglycinamidine synthase subunit PurS; Reviewed | Back alignment and domain information |
|---|
Probab=84.13 E-value=3.6 Score=38.75 Aligned_cols=56 Identities=11% Similarity=0.184 Sum_probs=46.9
Q ss_pred CCCCCCHHHHHHHHHHHHhhhCCC-cceEEEEEEEEEecCC---CCCHHHHHHHH-HHhccc
Q 000572 98 RIPLLQDSAAAELLKSVQKKISNQ-IVGLKTEHCFNIGLDS---RISTKKLEVLK-WLLQET 154 (1414)
Q Consensus 98 g~~als~~~~e~Ll~~l~~~~~~~-V~~v~t~~~y~v~~~~---~Ls~~~~~~l~-~LL~~~ 154 (1414)
-+|...|++++.+++.|+. ++.+ |.+|++-.+|.++.++ +++.++.+.+. .||.+|
T Consensus 9 ~k~gv~Dp~G~ai~~~l~~-lg~~~v~~Vr~~k~~~l~~~~~~~~~a~~~v~~i~~~lL~Np 69 (80)
T PRK05974 9 LKEGVLDPQGQAIKGALGS-LGYDGVEDVRQGKYFELELEGESEEKAEADLKEMCEKLLANP 69 (80)
T ss_pred ECCCCcChHHHHHHHHHHH-cCCCCcceEEEEEEEEEEEcCCchhhhHHHHHHHHHHhcCCc
Confidence 4789999999999999998 5665 9999999999998655 47788888876 688764
|
|
| >TIGR02069 cyanophycinase cyanophycinase | Back alignment and domain information |
|---|
Probab=80.28 E-value=6.3 Score=45.32 Aligned_cols=96 Identities=18% Similarity=0.261 Sum_probs=64.4
Q ss_pred CCCEEEEEecCCCcC-H--HHHHHHHHHcCCc-eEEeecccc--cCc---ccCccCcCEEEEcCCCCchhhhhcccchhH
Q 000572 1143 SKPKVAVIREEGSNG-D--REMSAAFYAAGFE-PWDVTMSDL--ING---AISLDEFRGIVFVGGFSYADVLDSAKGWSA 1213 (1414)
Q Consensus 1143 ~~~kVaIl~~~G~n~-~--~~~~~Al~~aG~~-~~~v~~~dl--~~~---~~~l~~~dglvlPGG~s~gD~l~~g~~~a~ 1213 (1414)
..+||++|-.-+... + ..+..+|++.|++ +..+.+.+. ... ...|.++|+|++.||-- .+ ..
T Consensus 27 ~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~~r~~a~~~~~~~~l~~ad~I~~~GGnq----~~-----l~ 97 (250)
T TIGR02069 27 EDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVREREDASDENAIALLSNATGIFFTGGDQ----LR-----IT 97 (250)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecCChHHccCHHHHHHHhhCCEEEEeCCCH----HH-----HH
Confidence 456888885433211 1 2457789999995 566665421 111 13578899999999863 21 12
Q ss_pred HHhhcchHHHHHHHHHhCCCCeEEEEehhhHHHHh
Q 000572 1214 SIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMAL 1248 (1414)
Q Consensus 1214 ~~l~~~~l~~~i~~f~~~~~~piLGIC~G~QlL~~ 1248 (1414)
..++..++.+.|++.++ +|+++.|.=.|.-+|..
T Consensus 98 ~~l~~t~l~~~l~~~~~-~G~vi~G~SAGA~i~~~ 131 (250)
T TIGR02069 98 SLLGDTPLLDRLRKRVH-EGIILGGTSAGAAVMSD 131 (250)
T ss_pred HHHcCCcHHHHHHHHHH-cCCeEEEccHHHHhccc
Confidence 24566778888988885 79999999999988865
|
This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1414 | ||||
| 3ugj_A | 1303 | Formyl Glycinamide Ribonucletide Amidotransferase F | 0.0 | ||
| 1t3t_A | 1303 | Structure Of Formylglycinamide Synthetase Length = | 0.0 | ||
| 3viu_A | 725 | Crystal Structure Of Purl From Thermus Thermophilus | 1e-18 | ||
| 3d54_D | 213 | Stucture Of Purlqs From Thermotoga Maritima Length | 1e-12 | ||
| 3d54_A | 629 | Stucture Of Purlqs From Thermotoga Maritima Length | 2e-07 | ||
| 2hs0_A | 603 | T. Maritima Purl Complexed With Atp Length = 603 | 3e-07 | ||
| 2hru_A | 603 | T. Maritima Purl Complexed With Adp Length = 603 | 4e-06 | ||
| 1vk3_A | 615 | Crystal Structure Of Phosphoribosylformylglycinamid | 6e-06 |
| >pdb|3UGJ|A Chain A, Formyl Glycinamide Ribonucletide Amidotransferase From Salmonella Typhimurum: Role Of The Atp Complexation And Glutaminase Domain In Catalytic Coupling Length = 1303 | Back alignment and structure |
|
| >pdb|1T3T|A Chain A, Structure Of Formylglycinamide Synthetase Length = 1303 | Back alignment and structure |
|
| >pdb|3VIU|A Chain A, Crystal Structure Of Purl From Thermus Thermophilus Length = 725 | Back alignment and structure |
|
| >pdb|3D54|D Chain D, Stucture Of Purlqs From Thermotoga Maritima Length = 213 | Back alignment and structure |
|
| >pdb|3D54|A Chain A, Stucture Of Purlqs From Thermotoga Maritima Length = 629 | Back alignment and structure |
|
| >pdb|2HS0|A Chain A, T. Maritima Purl Complexed With Atp Length = 603 | Back alignment and structure |
|
| >pdb|2HRU|A Chain A, T. Maritima Purl Complexed With Adp Length = 603 | Back alignment and structure |
|
| >pdb|1VK3|A Chain A, Crystal Structure Of Phosphoribosylformylglycinamidine Synthase Ii (Tm1246) From Thermotoga Maritima At 2.15 A Resolution Length = 615 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 | Back alignment and structure |
|---|
Score = 1490 bits (3858), Expect = 0.0
Identities = 496/1347 (36%), Positives = 727/1347 (53%), Gaps = 64/1347 (4%)
Query: 85 LSEKPAQEVVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKL 144
L + + + P L +LL Q + Q+ + E+ L++ ++ +
Sbjct: 2 LVPRGSHMMEILRGSPALSAFRINKLLARFQA-ANLQVHNIYAEYVHFADLNAPLNDSEQ 60
Query: 145 EVLKWLLQETYEPENLGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGL 204
L LL Y P ++ V PR + WS+ A I CGL
Sbjct: 61 AQLTRLL--QYGPALSSHTP----------AGKLLLVTPRPGTISPWSSKATDIAHNCGL 108
Query: 205 TEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYT--EKLTSFETSVVPEEVR 262
+V RLER Y L Q AA +HDRM E V++ P V
Sbjct: 109 QQVDRLERGVAYY-IEASTLTAEQWRQVAAELHDRMMETVFSSLTDAEKLFIHHQPAPVS 167
Query: 263 FVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSR 322
V ++ GR+AL + N +GLA E ++ Y F + + RNP +EL+ AQ+NSEH R
Sbjct: 168 SVDLLGEGRQALIDANLRLGLALAEDEIDYLQEAFTK-LGRNPNDIELYMFAQANSEHCR 226
Query: 323 HWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGS 382
H F +IDGKP ++L +++K+T + P+ + +KDN++ ++G V +
Sbjct: 227 HKIFNADWIIDGKPQPKSLFKMIKNTFETTPDYVLSAYKDNAAVMEGSAVGRYFADHNTG 286
Query: 383 RCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYC 442
R + + +L ETHN P A++P+PGA TG+GG IRD ATGRG+ A G+
Sbjct: 287 RYDFHQ--EPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFS 344
Query: 443 VGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMR 502
V NL + G PWE+ F P + + L I+ + G + + N+FG P + GY RT+ +
Sbjct: 345 VSNLRIPGFEQPWEED-FGKPERIVTALDIMTEGPLGGAAFNNEFGRPALTGYFRTYEEK 403
Query: 503 LPSGQ---RREWLKPIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASS 559
+ S R + KPIM +GGIG I +H+ KGE +G ++ +GGPA IG+GGGAASS
Sbjct: 404 VNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEIVVGAKLIVLGGPAMNIGLGGGAASS 463
Query: 560 MVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEI 619
M SGQ+DADLDF +VQR + EM ++ V+ C ++G+ NPI+ IHD GAGG N + E+
Sbjct: 464 MASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGLSNAMPEL 523
Query: 620 IYPKGA--EIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMA 677
+ G + ++R I+ + +S LEIW E QE+ + V + L +C+RER A
Sbjct: 524 VSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDELCKRERAPYA 583
Query: 678 VIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQARE 737
VIG + E + L D+ +DL L+ +LG P+ T + +
Sbjct: 584 VIGDATEEQHLSLHDN-----------HFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGD 632
Query: 738 PLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVI 797
L+ IT+ D++KRVL LP+V K FL T DR VTG+VA+ Q VGP Q+ +AD AV
Sbjct: 633 ALNR-ADITIADAVKRVLHLPTVAEKTFLVTIGDRTVTGMVARDQMVGPWQVPVADCAVT 691
Query: 798 AQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYA 857
+ G A +IGE+ LL+ A ARLAVGEALTN+ ++ + +K S NWM A
Sbjct: 692 TASLDSYYGEAMSIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANWMAA 751
Query: 858 AKLDGEGAAMYDAATALAEAM-IELGIAIDGGKDSLSMAA----YSGGEVVKAPGSLVIS 912
A GE A +YDA A+ E + +LG+ I GKDS+SM + + +P SLVIS
Sbjct: 752 AGHPGEDAGLYDAVKAVGEELCPQLGLTIPVGKDSMSMKTRWQEGNEQREMTSPLSLVIS 811
Query: 913 VYVTCPDITKTVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPY 972
+ D+ T+TP L +D LL IDL KG LG +ALAQV+ Q+G++ D+ DV
Sbjct: 812 AFARVEDVRHTLTPQLST-EDNALLLIDLGKGHNALGATALAQVYRQLGDKPADVRDVAQ 870
Query: 973 LKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFA 1032
LK ++ +Q L+ + HD SDGGLLV EM+FAG+ G+ +D+ + G+ LF
Sbjct: 871 LKGFYDAMQALVAARKLLAWHDRSDGGLLVTLAEMAFAGHCGVQVDIAALGDDHLAALFN 930
Query: 1033 EELGLVLEVSKSNLDTVSKKLHDAGVSAEIIG--QVNSSHSVEIKVDGLTHLNEKTSLLR 1090
EELG V++V + D V L G++ + Q + I + T +E + LR
Sbjct: 931 EELGGVIQVRAEDRDAVEALLAQYGLADCVHYLGQALAGDRFVITANDQTVFSESRTTLR 990
Query: 1091 DMWEETSFELEKFQRLASCVESEKEGLKSRCEPLWKLSFTPSLTDE---KYMNATSKPKV 1147
W ET++++++ + C + E E + +P + + + ++ Y+ ++PKV
Sbjct: 991 VWWAETTWQMQRLRDNPQCADQEHEAKANDTDPGLNVKLSFDINEDIAAPYIATGARPKV 1050
Query: 1148 AVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDS 1207
AV+RE+G N EM+AAF+ AGF+ DV MSDL+ G I L F +V GGFSY DVL +
Sbjct: 1051 AVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLGGRIGLGNFHALVACGGFSYGDVLGA 1110
Query: 1208 AKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGW-IPGPQVGGVHGAGGD 1266
+GW+ SI FN + ++F+ F+ RP T +LGVCNGCQ+M+ L IPG +
Sbjct: 1111 GEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMSNLRELIPGSE---------- 1160
Query: 1267 PSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDR 1326
PRFV N S RFE RFS V + SP+++L+GM GS + + +HGEGR DD L
Sbjct: 1161 -LWPRFVRNHSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVRDDAHLAA 1219
Query: 1327 ILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQYP 1386
+ L +RY D+ G TE YP N NGSP G+ A+ + +GR MMPHPER F
Sbjct: 1220 LESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTENGRVTIMMPHPERVFRTVANS 1279
Query: 1387 WYPKNWNVDKKGPSPWLKMFQNAREWC 1413
W+P+NW D SPW+++F+NAR+
Sbjct: 1280 WHPENWGED----SPWMRIFRNARKQL 1302
|
| >1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* Length = 615 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 3e-54
Identities = 137/783 (17%), Positives = 246/783 (31%), Gaps = 178/783 (22%)
Query: 275 EEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDG 334
+ + + L KE + R PT VEL + SEH +
Sbjct: 5 KIHHHHHHMKLRY-----LNIL-KEKLGREPTFVELQAFSVMWSEHCGYSHT-------- 50
Query: 335 KPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLD 394
K +R L GF+ N+ +
Sbjct: 51 KKYIRRL--------------PKTGFEGNAGVV--------------------NLDDYYS 76
Query: 395 VLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAP 454
V F E+HN P A+ PY GA TG GG IRD A G + A + + ++G
Sbjct: 77 VAFKIESHNHPSAIEPYNGAATGVGGIIRDVLAMG--ARPTAIFDSLHMSRI-IDGIIE- 132
Query: 455 WEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKP 514
G +DYGN G P + G R P
Sbjct: 133 ------------------------GIADYGNSIGVPTVGGELR-ISSLYAH-------NP 160
Query: 515 IMFSGGIGQIDHNHISKGE-PDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNA 573
++ G + ++ + + G ++V GG R G+ G + +S + A +
Sbjct: 161 LVNVLAAGVVRNDMLVDSKASRPGQVIVIFGGATGRDGIHGASFASEDLTGDKATK--LS 218
Query: 574 VQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCNVVKEIIY--PKGAEIDIRA 631
+Q GD +K+ ++ A +EM E + D GAGG + E++ GA + +
Sbjct: 219 IQVGDPFA-EKM--LIEAFLEMVEEGLVEGAQDLGAGGVLSATSELVAKGNLGAIVHLDR 275
Query: 632 IIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLV 691
+ + + + EI +E QE+ AV+ P+ + I + + V+ + E ++
Sbjct: 276 VPLREPDMEPWEILISESQERMAVVTSPQKASRILEIARKHLLFGDVVAEVIEEPVYRVM 335
Query: 692 DSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEFHHADQAREPLDIAPGITVMDSL 751
+ +++ ++ +L + P++ + + E +
Sbjct: 336 YRNDL-------------VMEVPVQ-LLANAPEEDIVEYTPGKIPEFKRVE--------- 372
Query: 752 KRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTV-GPLQITLADVAVIAQTYTDLTGGACA 810
+ R + + D V TV P AV+ G +
Sbjct: 373 ------FEEVNAREVFEQYDHMV-----GTDTVVPPGF----GAAVMR--IKRDGGYSLV 415
Query: 811 IGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDA 870
+ L + +AV E++ + L+ N+ +
Sbjct: 416 THSRADLALQDTYWGTLIAVLESVRKTLSVGAEPLAITN-CVNYGDPDVDPVG---LSAM 471
Query: 871 ATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKL 930
TAL A G+ + G SL Y+ + P +LV+ + K
Sbjct: 472 MTALKNACEFSGVPVASGNASL----YNTYQGKPIPPTLVVGMLGKVNPQKVA-----KP 522
Query: 931 GDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVS 990
+ VG +LE K ++ ++ L
Sbjct: 523 KPSKVFA----------------------VGWNDFELERE---KELWRAIRKLS----EE 553
Query: 991 TGHDISDGGLLVCTLEMSFA-GNYGITLDL-NSEGNSLFQTLFAEELGLVLEVSKSNLDT 1048
+S LL T +F I + L +F+E +V V + T
Sbjct: 554 GAFILSSSQLLTRTHVETFREYGLKIEVKLPEVRPAHQMVLVFSERTPVVD-VPVKEIGT 612
Query: 1049 VSK 1051
+S+
Sbjct: 613 LSR 615
|
| >1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* Length = 615 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 4e-05
Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 22/163 (13%)
Query: 959 QVGNESPDLEDVPYL-KRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITL 1017
QVG+ P+ K + E +++ + LV D+ GG+L T E+ GN G +
Sbjct: 220 QVGD--------PFAEKMLIEAFLEMVEEGLVEGAQDLGAGGVLSATSELVAKGNLGAIV 271
Query: 1018 DLNS-----EGNSLFQTLFAE--ELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSH 1070
L+ ++ L +E E + + S + + + +++ +V
Sbjct: 272 HLDRVPLREPDMEPWEILISESQER-MAVVTSPQKASRILEIARKHLLFGDVVAEVIEEP 330
Query: 1071 SVEIKVDGLTHLNEKTSLL-----RDMWEETSFELEKFQRLAS 1108
+ + LL D+ E T ++ +F+R+
Sbjct: 331 VYRVMYRNDLVMEVPVQLLANAPEEDIVEYTPGKIPEFKRVEF 373
|
| >3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima} Length = 213 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 5e-35
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 49/237 (20%)
Query: 1144 KPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYAD 1203
KP+ V+ GSN DR+ A GFEP V + D LD++ I+ GGFSY D
Sbjct: 2 KPRACVVVYPGSNCDRDAYHALEINGFEPSYVGLDD------KLDDYELIILPGGFSYGD 55
Query: 1204 VLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGA 1263
L ++ + + + + +R +G+CNG Q++ +G + G
Sbjct: 56 YLRPG-----AVAAREKIAFEIAKAAER-GKLIMGICNGFQILIEMGLLKGA-------- 101
Query: 1264 GGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGME-GSTLGVWAAHGEGRAYFPDDG 1322
+ N SG+F C++ + +E++ E G + + AHG GR Y D
Sbjct: 102 --------LLQNSSGKFICKWVDLIVENNDTPFTNAFEKGEKIRIPIAHGFGR-YVKIDD 152
Query: 1323 VLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERC 1379
++ +RY +VNGS +A + + G +MPHPER
Sbjct: 153 --VNVV------LRYVK-----------DVNGSDERIAGVLNESGNVFGLMPHPERA 190
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 66.4 bits (161), Expect = 6e-11
Identities = 86/556 (15%), Positives = 163/556 (29%), Gaps = 179/556 (32%)
Query: 938 HIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVP-YLKRVFETVQDLIGDELVSTGHDIS 996
H+D G+ + + VF+ ++ D +DV K + + +++ D ++ + +S
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSIL-SKEEI--DHIIMSKDAVS 62
Query: 997 DGGLLVCTLEMS-------FAG-----NYG---------------ITLDLNSEGNSLFQT 1029
L TL F NY +T + + L+
Sbjct: 63 GTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122
Query: 1030 --LFA-----------------EEL----GLVLE----VSKSNLDTVSKKLHDAGVSAEI 1062
+FA EL ++++ K+ + V ++
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV--ALDVCLSYKVQCKM 180
Query: 1063 --------IGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKFQRLASCVESEK 1114
+ NS +V L L LL + + + + + S +
Sbjct: 181 DFKIFWLNLKNCNSPETV------LEMLQ---KLLYQIDPNWTSRSDHSSNIKLRIHSIQ 231
Query: 1115 EGLKSRCEPLWKL-SFTPSLT------DEKYMNA---------TSKPKVAVIREEGSNGD 1158
L+ L K + L + K NA T++ K V +
Sbjct: 232 AELRR----LLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFK-QVTDFLSAATT 286
Query: 1159 REMSAAFYAAGFEP---------W-DVTMSDL------ING-AISLDEFRGIVFVGGFSY 1201
+S ++ P + D DL N +S+ I S
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI-----I----AESI 337
Query: 1202 ADVLDSAKGW------------SASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL 1249
D L + W +S+ +P ++++ + R F
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNVLEP--AEYRKMFDRLSVFPPSA---------- 385
Query: 1250 GWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWA 1309
IP + + S V N+ ++S V K + ST+ + +
Sbjct: 386 -HIP-TILLSLIWFDVIKSDVMVVVNKL----HKYSLV---------EKQPKESTISIPS 430
Query: 1310 AHGEGRAYFPDDGVL-DRILHSHLAPVRYCDDDGNPTEV--YPFNVNGSPLGVAAICSPD 1366
+ E + ++ L I+ + P + DD P + Y S
Sbjct: 431 IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY-------------FYSHI 477
Query: 1367 GRHLAMMPHPERCFLM 1382
G HL + HPER L
Sbjct: 478 GHHLKNIEHPERMTLF 493
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.0 bits (134), Expect = 8e-08
Identities = 54/419 (12%), Positives = 118/419 (28%), Gaps = 113/419 (26%)
Query: 17 QGTHRNTLFLNGNSAIKRKNLLWGALSNQNS--------------KFGISNR-------K 55
+ H + + L +S L + +N F +S + K
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFK 275
Query: 56 SVSLKCCAQS-KPRAVVSGDKTASVDEQPNLSEK---------PAQEVVHFYRIPLLQDS 105
V+ A + ++ T + DE +L K P + + P
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT---NPRRLSI 332
Query: 106 AAAEL--------------LKSVQKKISNQIVGLKTE---HCF-NIGL---DSRISTKKL 144
A + + I + + L+ F + + + I T L
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL 392
Query: 145 EVLKWLLQETYEPENLGTE----SFLEKKKQKGLKAVIVEVGPRLSF-TTAWSANAVSIC 199
++ W + + + S +EK+ ++ ++ P + N ++
Sbjct: 393 SLI-WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI-----PSIYLELKVKLENEYALH 446
Query: 200 RVCGLTEVTRLERSRRYLLFSKGALQ-DNQINDFAAMVHDRMTECVYTEKLTSFETSVVP 258
R V + + D H + + E++T F +
Sbjct: 447 RSI----VDHYNIPKTFDSDDLIPPYLDQYFYSHIGH-H--LKNIEHPERMTLFRMVFL- 498
Query: 259 EEVRFVPVMENG-RKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVE--LFDI-- 313
+ RF +E R N + Q L++Y K I N E + I
Sbjct: 499 -DFRF---LEQKIRHDSTAWNASGSILNTLQQLKFY----KPYICDNDPKYERLVNAILD 550
Query: 314 ----AQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIK 368
+ N S++ +++ L + ++ F++ ++
Sbjct: 551 FLPKIEENLICSKY------------------TDLLRIALM-AEDEAI--FEEAHKQVQ 588
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 8e-07
Identities = 102/747 (13%), Positives = 204/747 (27%), Gaps = 243/747 (32%)
Query: 205 TEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKLTSFETSVVP-EEVRF 263
E + + +L +D +++F +C + S++ EE+
Sbjct: 9 FETGEHQYQYKDILS---VFEDAFVDNF---------DCKDVQ---DMPKSILSKEEIDH 53
Query: 264 V---PVMENGRK----ALEEINQEMGLAFDEQDLQ--Y---YTRLFKEDIKRNPTTVELF 311
+ +G L +EM F E+ L+ Y + + E + + T ++
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMT-RMY 112
Query: 312 DIAQSNSEHSRHWFFTGKIVIDGKPMVR--TLMQIVKSTLQANPNNSVI-----GF-KDN 363
+ R + V + R +++ ++ L+ P +V+ G K
Sbjct: 113 -----IEQRDRLY--NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK-- 163
Query: 364 S----SAIKGFPVKQLRP-----VQPGSRC---QLSESSQDLDVLFTAETHNFPCAVAPY 411
+ + V+ + + + E Q L + +
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 412 PGAETGAGGRIRD--THATGRGSFVVASTAGYCVGNL-NVEGSYAPWEDP----SFTYPS 464
+R +V L NV + +F
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLV----------LLNV------Q-NAKAWNAF---- 262
Query: 465 NLASPLQILI---DASN----GASDYGNKFGEPLIQGYTRTFGMRL--------PSGQRR 509
NL+ +IL+ A+ + + T L P R
Sbjct: 263 NLSC--KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320
Query: 510 EWLK--PIMFSGGIGQIDHNHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDA 567
E L P S I + + ++ + ++ +
Sbjct: 321 EVLTTNPRRLSI-IAESIRDGLATWDN-------------WK--------------HVNC 352
Query: 568 DLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPI------ISIHDQGAGGNCNV---VKE 618
D KL ++ + + + E +S+ A ++ +
Sbjct: 353 D---------------KLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA----HIPTILLS 393
Query: 619 IIYPKGAEIDIRAIIVGDHTLSVLEIWGAE-----YQEQDAVLVKPESRDLLQSICERER 673
+I+ + D+ ++ H S++E E + VK E+ L
Sbjct: 394 LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS----- 448
Query: 674 VSMAVIGTISGEGRVVLVDSAAVQKC-QSSGLPPPPPAVDLELERVLGDMPQKTFEF--H 730
+VD + K S L PP +D Q + H
Sbjct: 449 ----------------IVDHYNIPKTFDSDDLIPPY--LD-----------QYFYSHIGH 479
Query: 731 HADQAREPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIT 790
H +L R++ L RFL K+ T A G + T
Sbjct: 480 HLKNIEH--------PERMTLFRMVFL----DFRFLEQKIRHDSTAWNA----SGSILNT 523
Query: 791 LADVAVIAQTYTDLTGGACAIGEQPIKGLLN--PKAMARLAVGEALTNLVWAKVTSLSHV 848
L + + Y E+ + +L+ PK NL+ +K T L +
Sbjct: 524 LQQL----KFYKPYICDNDPKYERLVNAILDFLPKIE---------ENLICSKYTDLLRI 570
Query: 849 KASGNWMYAAKLDGEGAAMYDAATALA 875
A + + A +A +
Sbjct: 571 ---------ALMAEDEAIFEEAHKQVQ 588
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 5e-04
Identities = 40/271 (14%), Positives = 80/271 (29%), Gaps = 68/271 (25%)
Query: 92 EVVHFYR--IPLLQDSAAAEL-LKSVQ---KKISNQIVGLKTEHCFNIGLDSRISTKKLE 145
E + Y+ + + +D+ K VQ K I L E +I + S+ +
Sbjct: 13 EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSI------LSKEEIDHI-IMSKDAVSGTL 65
Query: 146 VLKWLLQETYEPENLGTESFLEKKKQKG---LKAVIVEV-----GPRLSFTTA----WSA 193
L W L + E + F+E+ + L + I + ++
Sbjct: 66 RLFWTLLS--KQEE-MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122
Query: 194 NAV----SICRVCGLTEVTRLE------RSRRYLL------FSKGALQDNQINDFAAMVH 237
N V ++ R L +L R + +L K + + + V
Sbjct: 123 NQVFAKYNVSR---LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYK--VQ 177
Query: 238 DRMTECVY-------------TEKLTSFETSVVPEEVRFVPVMENGRKALEEINQEMGLA 284
+M ++ E L + P N + + I E+
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237
Query: 285 FDEQDLQYYTR--LFKEDIKRNPTTVELFDI 313
+ Y L ++ +N F++
Sbjct: 238 LKSKP---YENCLLVLLNV-QNAKAWNAFNL 264
|
| >2z1e_A Hydrogenase expression/formation protein HYPE; [NIFE] hydrogenase maturation, ATPase, transferase; 1.55A {Thermococcus kodakarensis} SCOP: d.79.4.1 d.139.1.1 PDB: 2z1f_A Length = 338 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 8e-04
Identities = 41/217 (18%), Positives = 82/217 (37%), Gaps = 29/217 (13%)
Query: 875 AEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTVTPDLKLGDDG 934
E E+ + I G D+ +VV+ + + K+GD
Sbjct: 118 DETAREVPVPIVTG-DT---------KVVEDKIEMFVITAGIGIAEHPVSDAGAKVGDA- 166
Query: 935 ILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHD 994
+L+ + G AL + + E+ DV + V + V + IG E + D
Sbjct: 167 VLVSGTIG-----DHGIALMSHREGIAFETELKSDVAPIWDVVKAVAETIGWENIHAMKD 221
Query: 995 ISDGGLLVCTLEMSFAGNYGITLD-----LNSEGNSLFQTL------FAEELGLVLEVSK 1043
+ GL E++ N GI + + E + + L A E +V+ V++
Sbjct: 222 PTRAGLSNALNEIARKSNVGILVREADIPIRPEVRAASEMLGISPYDVANEGKVVMVVAR 281
Query: 1044 SNLDTVSKKL--HDAGVSAEIIGQVNSSHSVEIKVDG 1078
+ + + + G +A IIG+V + + ++ ++
Sbjct: 282 EYAEEALEAMRKTEKGRNAAIIGEVIADYRGKVLLET 318
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1414 | ||||
| d1t3ta2 | 262 | c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidot | 1e-92 | |
| d1t3ta4 | 209 | d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like | 1e-61 | |
| d1t3ta5 | 200 | d.79.4.1 (A:617-816) FGAM synthase PurL, PurM-like | 4e-45 | |
| d1t3ta6 | 187 | d.139.1.1 (A:430-616) FGAM synthase PurL, PurM-lik | 9e-45 | |
| d1t3ta6 | 187 | d.139.1.1 (A:430-616) FGAM synthase PurL, PurM-lik | 0.002 | |
| d1t3ta7 | 217 | d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-li | 2e-43 | |
| d1t3ta3 | 152 | d.284.1.2 (A:1-152) FGAM synthase PurL, PurS-like | 1e-26 | |
| d1t3ta1 | 68 | a.5.10.1 (A:153-220) FGAM synthase PurL, linker do | 2e-26 | |
| d1vk3a1 | 165 | d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidi | 1e-25 | |
| d1vk3a3 | 179 | d.139.1.1 (A:167-345) Phosphoribosylformylglycinam | 2e-18 |
| >d1t3ta2 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidotransferase domain {Salmonella typhimurium [TaxId: 90371]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: FGAM synthase PurL, amidotransferase domain species: Salmonella typhimurium [TaxId: 90371]
Score = 297 bits (762), Expect = 1e-92
Identities = 124/274 (45%), Positives = 168/274 (61%), Gaps = 14/274 (5%)
Query: 1139 MNATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGG 1198
+ ++PKVAV+RE+G N EM+AAF+ AGF+ DV MSDL+ G I L F +V GG
Sbjct: 1 IATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLGGRIGLGNFHALVACGG 60
Query: 1199 FSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVG 1258
FSY DVL + +GW+ SI FN + ++F+ F+ RP T +LGVCNGCQ+M+ L +
Sbjct: 61 FSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMSNLRELIP---- 116
Query: 1259 GVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYF 1318
G PRFV N S RFE RFS V + SP+++L+GM GS + + +HGEGR
Sbjct: 117 ------GSELWPRFVRNHSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEV 170
Query: 1319 PDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPER 1378
DD L + L +RY D+ G TE YP N NGSP G+ A+ + +GR MMPHPER
Sbjct: 171 RDDAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTENGRVTIMMPHPER 230
Query: 1379 CFLMWQYPWYPKNWNVDKKGPSPWLKMFQNAREW 1412
F W+P+NW D SPW+++F+NAR+
Sbjct: 231 VFRTVANSWHPENWGED----SPWMRIFRNARKQ 260
|
| >d1t3ta4 d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: FGAM synthase PurL, PurM-like module, N1 and N2 domains species: Salmonella typhimurium [TaxId: 90371]
Score = 207 bits (527), Expect = 1e-61
Identities = 76/211 (36%), Positives = 119/211 (56%), Gaps = 6/211 (2%)
Query: 326 FTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQ 385
F +IDGKP ++L +++K+T + P+ + +KDN++ ++G V R + +
Sbjct: 2 FNADWIIDGKPQPKSLFKMIKNTFETTPDYVLSAYKDNAAVMEGSAVG--RYFADHNTGR 59
Query: 386 LSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGN 445
+ +L ETHN P A++P+PGA TG+GG IRD ATGRG+ A G+ V N
Sbjct: 60 YDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVSN 119
Query: 446 LNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPS 505
L + G PWE+ F P + + L I+ + G + + N+FG P + GY RT+ ++ S
Sbjct: 120 LRIPGFEQPWEED-FGKPERIVTALDIMTEGPLGGAAFNNEFGRPALTGYFRTYEEKVNS 178
Query: 506 ---GQRREWLKPIMFSGGIGQIDHNHISKGE 533
+ R + KPIM +GGIG I +H+ KGE
Sbjct: 179 HNGEELRGYHKPIMLAGGIGNIRADHVQKGE 209
|
| >d1t3ta5 d.79.4.1 (A:617-816) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 200 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: FGAM synthase PurL, PurM-like module, N1 and N2 domains species: Salmonella typhimurium [TaxId: 90371]
Score = 159 bits (403), Expect = 4e-45
Identities = 84/194 (43%), Positives = 114/194 (58%), Gaps = 6/194 (3%)
Query: 737 EPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAV 796
+ L+ A IT+ D++KRVL LP+V K FL T DR VTG+VA+ Q VGP Q+ +AD AV
Sbjct: 8 DALNRA-DITIADAVKRVLHLPTVAEKTFLVTIGDRTVTGMVARDQMVGPWQVPVADCAV 66
Query: 797 IAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMY 856
+ G A +IGE+ LL+ A ARLAVGEALTN+ ++ + +K S NWM
Sbjct: 67 TTASLDSYYGEAMSIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANWMA 126
Query: 857 AAKLDGEGAAMYDAATALA-EAMIELGIAIDGGKDSLSMAA----YSGGEVVKAPGSLVI 911
AA GE A +YDA A+ E +LG+ I GKDS+SM + + +P SLVI
Sbjct: 127 AAGHPGEDAGLYDAVKAVGEELCPQLGLTIPVGKDSMSMKTRWQEGNEQREMTSPLSLVI 186
Query: 912 SVYVTCPDITKTVT 925
S + D+ T+T
Sbjct: 187 SAFARVEDVRHTLT 200
|
| >d1t3ta6 d.139.1.1 (A:430-616) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: FGAM synthase PurL, PurM-like module, C1 and C2 domains species: Salmonella typhimurium [TaxId: 90371]
Score = 158 bits (400), Expect = 9e-45
Identities = 75/195 (38%), Positives = 114/195 (58%), Gaps = 13/195 (6%)
Query: 536 IGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEM 595
+G ++ +GGPA IG+GGGAASSM SGQ+DADLDF +VQR + EM ++ V+ C ++
Sbjct: 3 VGAKLIVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQL 62
Query: 596 GETNPIISIHDQGAGGNCNVVKEIIYP--KGAEIDIRAIIVGDHTLSVLEIWGAEYQEQD 653
G+ NPI+ IHD GAGG N + E++ +G + ++R I+ + +S LEIW E QE+
Sbjct: 63 GDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERY 122
Query: 654 AVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVDSAAVQKCQSSGLPPPPPAVDL 713
+ V + L +C+RER AVIG + E + L D+ + +DL
Sbjct: 123 VLAVAADQLPLFDELCKRERAPYAVIGDATEEQHLSLHDNHFDNQP-----------IDL 171
Query: 714 ELERVLGDMPQKTFE 728
L+ +LG P+ T +
Sbjct: 172 PLDVLLGKTPKMTRD 186
|
| >d1t3ta6 d.139.1.1 (A:430-616) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: FGAM synthase PurL, PurM-like module, C1 and C2 domains species: Salmonella typhimurium [TaxId: 90371]
Score = 38.8 bits (90), Expect = 0.002
Identities = 20/111 (18%), Positives = 34/111 (30%), Gaps = 6/111 (5%)
Query: 973 LKRVFETVQDLIGDELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNS-----EGNSLF 1027
+ V + L + HD+ GGL E+ G G +L G S
Sbjct: 52 CQEVIDRCWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELRDILSDEPGMSPL 111
Query: 1028 QTLFAE-ELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKVD 1077
+ E + VL V+ L + +IG + + +
Sbjct: 112 EIWCNESQERYVLAVAADQLPLFDELCKRERAPYAVIGDATEEQHLSLHDN 162
|
| >d1t3ta7 d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: FGAM synthase PurL, PurM-like module, C1 and C2 domains species: Salmonella typhimurium [TaxId: 90371]
Score = 155 bits (392), Expect = 2e-43
Identities = 73/211 (34%), Positives = 114/211 (54%), Gaps = 5/211 (2%)
Query: 926 PDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIG 985
P L +D LL IDL KG LG +ALAQV+ Q+G++ D+ DV LK ++ +Q L+
Sbjct: 1 PQLST-EDNALLLIDLGKGHNALGATALAQVYRQLGDKPADVRDVAQLKGFYDAMQALVA 59
Query: 986 DELVSTGHDISDGGLLVCTLEMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSN 1045
+ HD SDGGLLV EM+FAG+ G+ +D+ + G+ LF EELG V++V +
Sbjct: 60 ARKLLAWHDRSDGGLLVTLAEMAFAGHCGVQVDIAALGDDHLAALFNEELGGVIQVRAED 119
Query: 1046 LDTVSKKLHDAGVSAEI--IGQVNSSHSVEIKVDGLTHLNEKTSLLRDMWEETSFELEKF 1103
D V L G++ + +GQ + I + T +E + LR W ET++++++
Sbjct: 120 RDAVEALLAQYGLADCVHYLGQALAGDRFVITANDQTVFSESRTTLRVWWAETTWQMQRL 179
Query: 1104 QRLASCVESEKEGLKSRCEPLW--KLSFTPS 1132
+ C + E E + +P KLSF +
Sbjct: 180 RDNPQCADQEHEAKANDTDPGLNVKLSFDIN 210
|
| >d1t3ta3 d.284.1.2 (A:1-152) FGAM synthase PurL, PurS-like domain {Salmonella typhimurium [TaxId: 90371]} Length = 152 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurS-like superfamily: PurS-like family: FGAM synthase PurL, PurS-like domain domain: FGAM synthase PurL, PurS-like domain species: Salmonella typhimurium [TaxId: 90371]
Score = 105 bits (262), Expect = 1e-26
Identities = 39/148 (26%), Positives = 57/148 (38%), Gaps = 14/148 (9%)
Query: 100 PLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYEPEN 159
P L +LL Q + Q+ + E+ L++ ++ + L LLQ +
Sbjct: 9 PALSAFRINKLLARFQA-ANLQVHNIYAEYVHFADLNAPLNDSEQAQLTRLLQYGPALSS 67
Query: 160 LGTESFLEKKKQKGLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLF 219
L + V PR + WS+ A I CGL +V RLER Y
Sbjct: 68 HTPAGKL------------LLVTPRPGTISPWSSKATDIAHNCGLQQVDRLERGVAY-YI 114
Query: 220 SKGALQDNQINDFAAMVHDRMTECVYTE 247
L Q AA +HDRM E V++
Sbjct: 115 EASTLTAEQWRQVAAELHDRMMETVFSS 142
|
| >d1t3ta1 a.5.10.1 (A:153-220) FGAM synthase PurL, linker domain {Salmonella typhimurium [TaxId: 90371]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: RuvA C-terminal domain-like superfamily: FGAM synthase PurL, linker domain family: FGAM synthase PurL, linker domain domain: FGAM synthase PurL, linker domain species: Salmonella typhimurium [TaxId: 90371]
Score = 101 bits (253), Expect = 2e-26
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 258 PEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSN 317
P V V ++ GR+AL + N +GLA E ++ Y F + RNP +EL+ AQ+N
Sbjct: 3 PAPVSSVDLLGEGRQALIDANLRLGLALAEDEIDYLQEAFT-KLGRNPNDIELYMFAQAN 61
Query: 318 SEHSRH 323
SEH RH
Sbjct: 62 SEHCRH 67
|
| >d1vk3a1 d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} Length = 165 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 species: Thermotoga maritima [TaxId: 2336]
Score = 102 bits (256), Expect = 1e-25
Identities = 49/239 (20%), Positives = 72/239 (30%), Gaps = 78/239 (32%)
Query: 293 YTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQAN 352
Y + KE + R PT VEL + SEH + K ++
Sbjct: 4 YLNILKEKLGREPTFVELQAFSVMWSEHCGYSHT-------------------KKYIRRL 44
Query: 353 PNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYP 412
P GF+ N+ + V F E+HN P A+ PY
Sbjct: 45 PKT---GFEGNAGVVNLDDYYS--------------------VAFKIESHNHPSAIEPYN 81
Query: 413 GAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQI 472
GA TG GG IRD A G + + +I
Sbjct: 82 GAATGVGGIIRDVLAMGARPTAIFDSLHMS----------------------------RI 113
Query: 473 LIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNHISK 531
+ G +DYGN G P + G R P++ G + ++ +
Sbjct: 114 IDGIIEGIADYGNSIGVPTVGGELRIS--------SLYAHNPLVNVLAAGVVRNDMLVD 164
|
| >d1vk3a3 d.139.1.1 (A:167-345) Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 {Thermotoga maritima [TaxId: 2336]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 species: Thermotoga maritima [TaxId: 2336]
Score = 82.2 bits (202), Expect = 2e-18
Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 7/158 (4%)
Query: 537 GMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMG 596
G ++V GG R G+ G + +S ++Q GD + L +EM
Sbjct: 6 GQVIVIFGGATGRDGIHGASFAS--EDLTGDKATKLSIQVGDPFAEKMLIEA---FLEMV 60
Query: 597 ETNPIISIHDQGAGGNCNVVKEIIYPKG--AEIDIRAIIVGDHTLSVLEIWGAEYQEQDA 654
E + D GAGG + E++ A + + + + + + EI +E QE+ A
Sbjct: 61 EEGLVEGAQDLGAGGVLSATSELVAKGNLGAIVHLDRVPLREPDMEPWEILISESQERMA 120
Query: 655 VLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVD 692
V+ P+ + I + + V+ + E ++
Sbjct: 121 VVTSPQKASRILEIARKHLLFGDVVAEVIEEPVYRVMY 158
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1414 | |||
| d1t3ta2 | 262 | FGAM synthase PurL, amidotransferase domain {Salmo | 100.0 | |
| d1t3ta6 | 187 | FGAM synthase PurL, PurM-like module, C1 and C2 do | 100.0 | |
| d1t3ta4 | 209 | FGAM synthase PurL, PurM-like module, N1 and N2 do | 100.0 | |
| d1vk3a1 | 165 | Phosphoribosylformylglycinamidine synthase II, dom | 100.0 | |
| d1t3ta5 | 200 | FGAM synthase PurL, PurM-like module, N1 and N2 do | 100.0 | |
| d1t3ta7 | 217 | FGAM synthase PurL, PurM-like module, C1 and C2 do | 100.0 | |
| d1vk3a3 | 179 | Phosphoribosylformylglycinamidine synthase II, dom | 100.0 | |
| d1vk3a2 | 162 | Phosphoribosylformylglycinamidine synthase II, dom | 100.0 | |
| d1t3ta3 | 152 | FGAM synthase PurL, PurS-like domain {Salmonella t | 100.0 | |
| d1vk3a3 | 179 | Phosphoribosylformylglycinamidine synthase II, dom | 99.96 | |
| d1jvna2 | 232 | GAT subunit, HisH, (or domain) of imidazoleglycero | 99.91 | |
| d1t3ta1 | 68 | FGAM synthase PurL, linker domain {Salmonella typh | 99.9 | |
| d2abwa1 | 218 | Pyridoxine biosynthesis protein 2, Pdx2 {Malaria p | 99.89 | |
| d1k9vf_ | 200 | GAT subunit, HisH, (or domain) of imidazoleglycero | 99.89 | |
| d1vk3a2 | 162 | Phosphoribosylformylglycinamidine synthase II, dom | 99.88 | |
| d1q7ra_ | 202 | Hypothetical protein YaaE {Bacillus stearothermoph | 99.86 | |
| d1ka9h_ | 195 | GAT subunit, HisH, (or domain) of imidazoleglycero | 99.85 | |
| d2nv0a1 | 195 | Hypothetical protein YaaE {Bacillus subtilis [TaxI | 99.84 | |
| d2z1ea2 | 179 | Hydrogenase expression/formation protein HypE {The | 99.84 | |
| d1t3ta6 | 187 | FGAM synthase PurL, PurM-like module, C1 and C2 do | 99.83 | |
| d2a9va1 | 196 | GMP synthase subunit A, GuaAA {Archaeon Thermoplas | 99.8 | |
| d1t3ta7 | 217 | FGAM synthase PurL, PurM-like module, C1 and C2 do | 99.8 | |
| d1wl8a1 | 188 | GMP synthase subunit A, GuaAA {Archaeon Pyrococcus | 99.8 | |
| d2z1ea2 | 179 | Hydrogenase expression/formation protein HypE {The | 99.72 | |
| d1qdlb_ | 195 | Anthranilate synthase GAT subunit, TrpG {Archaeon | 99.71 | |
| d1o1ya_ | 230 | Hypothetical protein TM1158 {Thermotoga maritima [ | 99.69 | |
| d3c9ua1 | 137 | Thiamine monophosphate kinase (ThiL) N-terminal do | 99.69 | |
| d2zoda1 | 152 | Selenide, water dikinase SelD {Aquifex aeolicus [T | 99.68 | |
| d1l9xa_ | 288 | gamma-glutamyl hydrolase {Human (Homo sapiens) [Ta | 99.66 | |
| d1gpma2 | 205 | GMP synthetase {Escherichia coli [TaxId: 562]} | 99.65 | |
| d1i7qb_ | 192 | Anthranilate synthase GAT subunit, TrpG {Serratia | 99.57 | |
| d3c9ua2 | 163 | Thiamine monophosphate kinase (ThiL) C-terminal do | 99.56 | |
| d2z1ea1 | 113 | Hydrogenase expression/formation protein HypE {The | 99.55 | |
| d2zoda2 | 182 | Selenide, water dikinase SelD {Aquifex aeolicus [T | 99.54 | |
| d1vk3a1 | 165 | Phosphoribosylformylglycinamidine synthase II, dom | 99.54 | |
| d2zoda1 | 152 | Selenide, water dikinase SelD {Aquifex aeolicus [T | 99.52 | |
| d1a9xb2 | 228 | Carbamoyl phosphate synthetase, small subunit C-te | 99.52 | |
| d3c9ua1 | 137 | Thiamine monophosphate kinase (ThiL) N-terminal do | 99.47 | |
| d1s1ma1 | 258 | CTP synthase PyrG, C-terminal domain {Escherichia | 99.46 | |
| d2z1ea1 | 113 | Hydrogenase expression/formation protein HypE {The | 99.4 | |
| d2zoda2 | 182 | Selenide, water dikinase SelD {Aquifex aeolicus [T | 99.35 | |
| d1vcoa1 | 250 | CTP synthase PyrG, C-terminal domain {Thermus ther | 99.32 | |
| d3c9ua2 | 163 | Thiamine monophosphate kinase (ThiL) C-terminal do | 99.28 | |
| d1t3ta5 | 200 | FGAM synthase PurL, PurM-like module, N1 and N2 do | 99.22 | |
| d1g2ia_ | 166 | Intracellular protease {Archaeon Pyrococcus horiko | 99.08 | |
| d1oi4a1 | 170 | Hypothetical protein YhbO {Escherichia coli [TaxId | 99.0 | |
| d2ghra1 | 281 | Homoserine O-succinyltransferase HTS (MetA) {Bacil | 98.97 | |
| d1sy7a1 | 184 | Catalase, C-terminal domain {Neurospora crassa [Ta | 98.96 | |
| d1p5fa_ | 186 | DJ-1 {Human (Homo sapiens) [TaxId: 9606]} | 98.91 | |
| d1p80a1 | 156 | Catalase, C-terminal domain {Escherichia coli, HPI | 98.88 | |
| d1clia1 | 166 | Aminoimidazole ribonucleotide synthetase (PurM) N- | 98.88 | |
| d2fexa1 | 188 | Hypothetical protein Atu0886 {Agrobacterium tumefa | 98.85 | |
| d2ab0a1 | 195 | Protein ThiJ (YajL) {Escherichia coli [TaxId: 562] | 98.85 | |
| d1vhqa_ | 217 | Putative sigma cross-reacting protein 27A (SCRP-27 | 98.85 | |
| d1u9ca_ | 221 | GK2698 ortholog {Bacillus stearothermophilus [TaxI | 98.67 | |
| d1qvwa_ | 236 | Hypothetical protein Ydr533Cp {Baker's yeast (Sacc | 98.59 | |
| d1clia2 | 175 | Aminoimidazole ribonucleotide synthetase (PurM) C- | 98.41 | |
| d1n57a_ | 279 | HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]} | 98.19 | |
| d1clia2 | 175 | Aminoimidazole ribonucleotide synthetase (PurM) C- | 97.95 | |
| d1t3ta4 | 209 | FGAM synthase PurL, PurM-like module, N1 and N2 do | 97.49 | |
| d1clia1 | 166 | Aminoimidazole ribonucleotide synthetase (PurM) N- | 97.32 | |
| d1vq3a_ | 86 | PurS subunit of FGAM synthetase {Thermotoga mariti | 97.15 | |
| d1gtda_ | 82 | PurS subunit of FGAM synthetase {Archaeon Methanob | 96.74 | |
| d1t4aa_ | 80 | PurS subunit of FGAM synthetase {Bacillus subtilis | 96.53 |
| >d1t3ta2 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidotransferase domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: FGAM synthase PurL, amidotransferase domain species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=568.42 Aligned_cols=260 Identities=47% Similarity=0.845 Sum_probs=245.4
Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHCCH
Q ss_conf 68997899990299768799999999849952996256665754691374899991997824332023121677851011
Q 000572 1141 ATSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQP 1220 (1414)
Q Consensus 1141 ~~~~~kVaVl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlpGG~s~~D~l~ag~~~a~~~l~~~~ 1220 (1414)
..+||||+||++||+||++|+++||+.+||++.+|+++|+..++..|++||+|+|||||||+|.+++|++|+.+++.+..
T Consensus 3 ~~~kpkvaVl~~pGtNcd~e~~~Af~~aG~~~~~v~~~dl~~~~~~L~~~~~lvipGGFSygD~l~ag~~~a~~~~~~~~ 82 (262)
T d1t3ta2 3 TGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLGGRIGLGNFHALVACGGFSYGDVLGAGEGWAKSILFNHR 82 (262)
T ss_dssp TTCCCEEEEEECTTBCCHHHHHHHHHHTTCEEEEEEHHHHHHTSCCGGGCSEEEECCBCGGGGTTSTTHHHHHHHHHSHH
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 78998599994899796999999999859953899843066675554555259984331134214531488851456667
Q ss_pred HHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCC
Q ss_conf 79999998809998399990256998760964799988745789999987265159873498569999835898223588
Q 000572 1221 LLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGM 1300 (1414)
Q Consensus 1221 l~~~i~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g~~~~~~~~~~~~p~l~~N~s~rfe~r~v~v~i~~~~s~~l~g~ 1300 (1414)
+++++.+|++++|+||||||||||+|.++|+++. +. ..++++++|.|+||||||+++++++++|+|++++
T Consensus 83 ~~~~~~~f~~~~~~~iLGICNGfQiL~elg~l~p--g~--------~~~~~~~~N~s~rfe~rw~~~~v~~~~s~~~~~~ 152 (262)
T d1t3ta2 83 VRDEFETFFHRPQTLALGVCNGCQMMSNLRELIP--GS--------ELWPRFVRNHSDRFEARFSLVEVTQSPSLLLQGM 152 (262)
T ss_dssp HHHHHHHHHHSSSCEEEEETHHHHHHHTTGGGST--TC--------TTCCEEECCTTSSCEEEEEEEEECCCSCGGGTTC
T ss_pred HHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCC--CC--------CCCCCCCCCCCCEEEEEEEEECCCCCCCHHHCCC
T ss_conf 7888888762489517861608899997456688--74--------4574300545776988776500246667644368
Q ss_pred CCCEEEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCC
Q ss_conf 89679999862465178079035889731693689983699997666899989986761599848985999856786566
Q 000572 1301 EGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCF 1380 (1414)
Q Consensus 1301 ~g~~l~~~~~Hgegr~~~~~~~~~~~l~~~~~i~~~y~d~~g~~~~~yP~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~ 1380 (1414)
+|+.+|+|++||||||+++++..+++|.+++||+++|||.+|+++++||+|||||.++||||||+|||||||||||||++
T Consensus 153 ~g~~l~ipiaHgEG~f~~~~~~~l~~L~~~~~ia~~Y~d~~g~~~~~yp~NPNGS~~~IAGIcs~~GrvlgmMPHPER~~ 232 (262)
T d1t3ta2 153 VGSQMPIAVSHGEGRVEVRDDAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTENGRVTIMMPHPERVF 232 (262)
T ss_dssp TTCEEEEEEEESSCEEECSSHHHHHHHHHTTCEEEEEBCTTSCBCCSTTTSSSCCGGGEEEEECTTSSEEEESSBGGGSS
T ss_pred CCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCHHHHH
T ss_conf 78606764542778734488899987542361689997688862224678998876465689879998899767836741
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 5413778999877889999936999999998619
Q 000572 1381 LMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWCS 1414 (1414)
Q Consensus 1381 ~~~q~~~~p~~~~~~~~~~spw~~~F~n~~~~~~ 1414 (1414)
++|||||+|+.|. ++|||++||+||++|++
T Consensus 233 ~~~q~~~~~~~~~----~~spw~~iF~na~~~v~ 262 (262)
T d1t3ta2 233 RTVANSWHPENWG----EDSPWMRIFRNARKQLG 262 (262)
T ss_dssp BGGGCSSCCTTCC----SBCTTHHHHHHHHHHHC
T ss_pred HCCCCCCCCCCCC----CCCHHHHHHHHHHHHCC
T ss_conf 0011675786567----78959999999998639
|
| >d1t3ta6 d.139.1.1 (A:430-616) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: FGAM synthase PurL, PurM-like module, C1 and C2 domains species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=336.22 Aligned_cols=184 Identities=41% Similarity=0.713 Sum_probs=174.2
Q ss_pred CCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHH
Q ss_conf 99999999915887666427889986618998866665335799999999999999999832259903998599783888
Q 000572 535 DIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGNCN 614 (1414)
Q Consensus 535 ~~GD~Ivv~G~~tgr~GlgGa~~ss~~~~~~~~~~~~~~Vq~~dp~~ek~l~~~i~~~~el~~~~~i~ai~DigaGGL~~ 614 (1414)
..||+|+++|++|||+|+||++|||..+++.+.+.++++||+|||+|||++++++++|+++++.++|.+|||+|||||++
T Consensus 2 ~vG~~ii~vG~~tgrdGigGas~sS~~~~~~~~~~~~~aVQ~gdP~~ek~l~~~~~~~~e~~~~~~i~~i~D~GAGGl~~ 81 (187)
T d1t3ta6 2 VVGAKLIVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGLSN 81 (187)
T ss_dssp CTTCEEEEEESCBCSCC-------------------CTTCCCCCHHHHHHHHHHHHHHHTTGGGCCEEEEEECCTTTHHH
T ss_pred CCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC
T ss_conf 88999999779878567770887535432665445655346699899989999999999860778636750579983120
Q ss_pred HHHHHHC--CCEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEEEE
Q ss_conf 8998746--98199990787778788228999604345216999967897899999977399727999999488399995
Q 000572 615 VVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVLVD 692 (1414)
Q Consensus 615 al~Ela~--~~G~~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~i~~ 692 (1414)
++.||++ +.|++|||++||+++++|+|||||+|||||||+++|+|++.++|+++|++|++++++||++|+++++++++
T Consensus 82 a~~Ema~~~g~G~~i~Ld~Vp~~~~~m~p~EI~~SESQERm~~~v~~~~~~~~~~i~~k~~~~~~vIG~vt~~~~~~v~~ 161 (187)
T d1t3ta6 82 AMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDELCKRERAPYAVIGDATEEQHLSLHD 161 (187)
T ss_dssp HHHHHHHHTTCEEEEEGGGSCBSCTTCCHHHHHHCCCSSEEEEEECGGGHHHHHHHHHHHTCCEEEEEEEESSCEEEEEE
T ss_pred CCHHHHHCCCCEEEEECHHCCCCCCCCCHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEE
T ss_conf 23888850797489977110045645386888631700042788650678999999998189837999870177699996
Q ss_pred CCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCEECC
Q ss_conf 7410002579999999948721333408999720012
Q 000572 693 SAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKTFEF 729 (1414)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~dl~~~~l~~~~p~~~~~~ 729 (1414)
.. .++.++|+|+++|++++|+|+|+.
T Consensus 162 ~~-----------~ge~vvdlpl~~L~~~~P~y~Rev 187 (187)
T d1t3ta6 162 NH-----------FDNQPIDLPLDVLLGKTPKMTRDV 187 (187)
T ss_dssp TT-----------TTEEEEEEEHHHHTCCCCCCEEEE
T ss_pred CC-----------CCCEEEEEEHHHHCCCCCCCCCCC
T ss_conf 46-----------899899969899769998767779
|
| >d1t3ta4 d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: FGAM synthase PurL, PurM-like module, N1 and N2 domains species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=343.91 Aligned_cols=205 Identities=36% Similarity=0.721 Sum_probs=183.7
Q ss_pred EEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 00358999695250319999998721299980464306863252687531111689987642335885079998111379
Q 000572 325 FFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNF 404 (1414)
Q Consensus 325 ~f~~~~~~d~~~~~~~lf~~i~~~~~~~~~~~~~g~~Dnaavi~~~~~~~~~~~~~g~~a~~~~~~~~~~i~~kvEthn~ 404 (1414)
||||+|+|||+++++|||+|||+|++..+++++++|+|||++|++.+..++.+.. .+..+....++++++||+|||||
T Consensus 1 IFNa~~~IDG~~~~~SLF~mIk~T~~~~~~~~~~ay~DNa~vI~g~~~~~l~~~~--~~~~~~~~~~~~~~~~k~EtHNh 78 (209)
T d1t3ta4 1 IFNADWIIDGKPQPKSLFKMIKNTFETTPDYVLSAYKDNAAVMEGSAVGRYFADH--NTGRYDFHQEPAHILMKVETHNH 78 (209)
T ss_dssp HHHCEEEETTEEESSCHHHHHHHHHHHCCTTEEECSSSSSEEEEEEEEEEEEECT--TTCBEEEEEEEEEEEEEEEECHH
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCEEEEEC--CCCCCCCCCCCEEEEEEEECCCC
T ss_conf 9335888747176768899999888449995599752854664146630477505--76642111231379998614789
Q ss_pred CCCCCCHHHHHHCCCCCCCCHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 98889478896234664322002479960477867887358888899999899988899998996999999999999997
Q 000572 405 PCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYG 484 (1414)
Q Consensus 405 ps~idP~~gA~tgvgg~irDi~amGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~Gi~d~~ 484 (1414)
||+|+||+||+||+||++||+.++||||+|+|++++||||++++|+...|||+ .+.+|.++++|++|+.+++.|.++|+
T Consensus 79 Psai~Pf~GAaTGvGG~iRD~~~~g~Ga~piA~~~~~~~g~l~~~~~~~~~e~-~~~~~~~~~~~~~I~~~~~~G~~~yg 157 (209)
T d1t3ta4 79 PTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEE-DFGKPERIVTALDIMTEGPLGGAAFN 157 (209)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHTSTTCCEEEEEEEEEEESCCCCTTCCCTTCC-CCCCCTTSCCHHHHHHHHHHHHHHHH
T ss_pred CCEECCCCCCCCCCCCCEEEHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCC-CCCCCCCCCCCCEECCCCCCCCEECC
T ss_conf 85116767765543660675325066668875236899851367665465524-45775455672014035654423446
Q ss_pred HHHCCEEEEEEEEEECCCCCC---CCCCCCCCCEEEEEEEEEEECCCCCCC
Q ss_conf 691990422422795311589---874333774488999985607662248
Q 000572 485 NKFGEPLIQGYTRTFGMRLPS---GQRREWLKPIMFSGGIGQIDHNHISKG 532 (1414)
Q Consensus 485 n~~GvPivgG~t~s~~~~~~~---g~~~~~~~Pl~~~~~vG~v~~~~i~~~ 532 (1414)
|+||+|+++|.++++.....+ +++++|+||+|+++++|.++++++.|.
T Consensus 158 N~~G~P~i~g~~~~~~~~~~~~~~~~~~~~~kPim~~ggiG~i~~~~~~K~ 208 (209)
T d1t3ta4 158 NEFGRPALTGYFRTYEEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKG 208 (209)
T ss_dssp HHHTCCEEEEEEEECEEEEEETTEEEEEECSSCEEEEEEEEEECGGGSSCC
T ss_pred CCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCEEEECCCEEECHHHCCCC
T ss_conf 756899742679992541355543102218997699740167148985468
|
| >d1vk3a1 d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=343.37 Aligned_cols=165 Identities=29% Similarity=0.425 Sum_probs=143.4
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEE
Q ss_conf 59999999986409999888899798630134554000358999695250319999998721299980464306863252
Q 000572 289 DLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHWFFTGKIVIDGKPMVRTLMQIVKSTLQANPNNSVIGFKDNSSAIK 368 (1414)
Q Consensus 289 el~~~~~~f~~~l~R~Pt~~El~~~~q~wSEHCrhk~f~~~~~~d~~~~~~~lf~~i~~~~~~~~~~~~~g~~Dnaavi~ 368 (1414)
||+|++..|. +|||+|||+||+||+|+||||||||+|+ ++++ ....++|+|||+||+
T Consensus 1 e~~yl~~~~~-~l~R~pt~~El~~~aq~~SEHC~~k~~~-------------------~~~~---~~~~~~~~dNAgVi~ 57 (165)
T d1vk3a1 1 KLRYLNILKE-KLGREPTFVELQAFSVMWSEHCGYSHTK-------------------KYIR---RLPKTGFEGNAGVVN 57 (165)
T ss_dssp CHHHHHHHHH-HHTSCCCHHHHHHHHHHTSHHHHCTTTH-------------------HHHH---TSCBCTTSSSTTEEE
T ss_pred CHHHHHHHHH-HHCCCCCHHHHHHHHHHCCHHCCCCCHH-------------------HHHH---CCCCCCCCCCCCEEE
T ss_conf 9389999999-9588998999999998731120772046-------------------6774---285001367740651
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCEEEEEEEEEEECCCCC
Q ss_conf 68753111168998764233588507999811137998889478896234664322002479960477867887358888
Q 000572 369 GFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNV 448 (1414)
Q Consensus 369 ~~~~~~~~~~~~g~~a~~~~~~~~~~i~~kvEthn~ps~idP~~gA~tgvgg~irDi~amGrGA~P~a~l~~l~~g~~~~ 448 (1414)
.+++++++||+|||||||+++||+||+||+||++||+++| ||+|++.+++|.|++
T Consensus 58 --------------------~~~~~~i~~k~ETHNhPtai~Pf~GAaTgvgG~iRD~~~~--Ga~p~a~~~~L~~~~--- 112 (165)
T d1vk3a1 58 --------------------LDDYYSVAFKIESHNHPSAIEPYNGAATGVGGIIRDVLAM--GARPTAIFDSLHMSR--- 112 (165)
T ss_dssp --------------------SSSSEEEEEEEEECHHHHHHCHHHHHHHHHHHHHHHHHHT--TCEEEEEEEEEEESS---
T ss_pred --------------------CCCCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHCCCCC--CCCCCCCCCCCCHHH---
T ss_conf --------------------1566405678832783420358775341134554254233--455601347731122---
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCC
Q ss_conf 89999989998889999899699999999999999769199042242279531158987433377448899998560766
Q 000572 449 EGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDHNH 528 (1414)
Q Consensus 449 P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~Gi~d~~n~~GvPivgG~t~s~~~~~~~g~~~~~~~Pl~~~~~vG~v~~~~ 528 (1414)
+++++++|+++|||+||+|+|+|+++ |+++ ...+|+|+++++|.++.++
T Consensus 113 -----------------------i~~~~v~G~a~ygN~~G~P~v~G~v~-~~~~-------~~~~Pi~~~g~vG~i~~d~ 161 (165)
T d1vk3a1 113 -----------------------IIDGIIEGIADYGNSIGVPTVGGELR-ISSL-------YAHNPLVNVLAAGVVRNDM 161 (165)
T ss_dssp -----------------------CCHHHHHHHHHHHHHHTCCEEEEEEE-ECGG-------GTTCCEEEEEEEEEEETTS
T ss_pred -----------------------HHHHCCHHHHHHHHHHCCCCCCEEEE-EECC-------CCCCCEEEEEEEEECCCCC
T ss_conf -----------------------32220223999987409873331599-9164-------4999758970587337653
Q ss_pred CCCC
Q ss_conf 2248
Q 000572 529 ISKG 532 (1414)
Q Consensus 529 i~~~ 532 (1414)
++++
T Consensus 162 iv~S 165 (165)
T d1vk3a1 162 LVDS 165 (165)
T ss_dssp CCCS
T ss_pred CCCC
T ss_conf 0559
|
| >d1t3ta5 d.79.4.1 (A:617-816) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: FGAM synthase PurL, PurM-like module, N1 and N2 domains species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=336.62 Aligned_cols=188 Identities=43% Similarity=0.607 Sum_probs=168.0
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCC
Q ss_conf 97898999899999999970999875022654022445854100233688789768389998459881374999854799
Q 000572 737 EPLDIAPGITVMDSLKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPI 816 (1414)
Q Consensus 737 ~~~~~~~~~~l~~~l~~vL~~p~V~SK~~i~~qyDr~V~g~tv~~p~vGp~~~p~~DaAVi~~~~~~~~gia~s~g~~p~ 816 (1414)
++++. +..+++++|+++|+|||||||+|||+||||+|||+||+||++||+|.|++|++++.....+.+|+|+|+|++|+
T Consensus 8 ~~~~~-~~~~l~~~l~~lL~~pnv~SK~~i~~qyD~~V~g~tv~~p~~G~~~~~~~d~~~~~~~~~~~~g~a~s~g~np~ 86 (200)
T d1t3ta5 8 DALNR-ADITIADAVKRVLHLPTVAEKTFLVTIGDRTVTGMVARDQMVGPWQVPVADCAVTTASLDSYYGEAMSIGERAP 86 (200)
T ss_dssp CCCCC-TTCCHHHHHHHHTTSTTTSCCHHHHTTSCSCTTSCEEECSEETTTTEECCSSEEEESSTTCSCEEEEEEEECGG
T ss_pred CCCCC-CCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf 77787-78899999999971886444054898705515561477515574235533243323358984379997588886
Q ss_pred CCCCCHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 88889999999999998510111476541011123322334478871799999-99999999999298102344322232
Q 000572 817 KGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYD-AATALAEAMIELGIAIDGGKDSLSMA 895 (1414)
Q Consensus 817 ~~~~dP~~ga~~AV~eai~niaa~Ga~pl~~v~~s~n~~~p~~~~~~~~~l~~-a~~gl~dac~~lgipivgGkdSls~~ 895 (1414)
++.+|||+||++||+|++|||+++|+.|++++.+++||||+...+++..++++ +..++.|+|++|++|++||||||||+
T Consensus 87 ~~~~dP~~ga~~aV~Ea~rNl~a~Ga~~~~~i~~~~n~~~~~~~~~e~~~~~~~~~~~~~d~c~~l~ip~i~GkdSls~~ 166 (200)
T d1t3ta5 87 VALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYDAVKAVGEELCPQLGLTIPVGKDSMSMK 166 (200)
T ss_dssp GGGTCHHHHHHHHHHHHHHHHTTSBCCSGGGCEEEEEEECBTTSTTHHHHHHHHHHHHHTTHHHHHTCEEEEEEEECBCE
T ss_pred CEECCHHHHHHHHHHHHHHHHEECCCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
T ss_conf 56207899999999999865412266664213220214432599745626999999999999998198867788876212
Q ss_pred CCCCC----CEEECCCCEEEEEEEECCCCCCCCC
Q ss_conf 22699----3000087389999998189993138
Q 000572 896 AYSGG----EVVKAPGSLVISVYVTCPDITKTVT 925 (1414)
Q Consensus 896 ~~~~~----~~i~~ppTlvisa~G~v~d~~~~it 925 (1414)
+.+++ ..+++||||+|+++|.++|+++++|
T Consensus 167 ~~~~~~~~~~~v~~PpTlvis~~g~v~Di~k~vT 200 (200)
T d1t3ta5 167 TRWQEGNEQREMTSPLSLVISAFARVEDVRHTLT 200 (200)
T ss_dssp EEEESSSSEEEEECCCEEEEEEEEEESBGGGCCC
T ss_pred EECCCCCCCCEECCCCCEEEEEEEEECCCCCCCC
T ss_conf 0024688542343799838999999453200549
|
| >d1t3ta7 d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: FGAM synthase PurL, PurM-like module, C1 and C2 domains species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=322.00 Aligned_cols=212 Identities=34% Similarity=0.543 Sum_probs=195.3
Q ss_pred CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
Q ss_conf 88667999189999918996664168999996201999999999689999999999987245821998189883699989
Q 000572 926 PDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLVCTL 1005 (1414)
Q Consensus 926 p~~k~~Gd~~li~v~lg~~~~~LGGS~l~~~~~~~g~~~P~v~d~~~lk~~~~~v~~li~~glV~A~hDvSdGGL~~aL~ 1005 (1414)
|++|.+| +.|++|++|.++.+||||+|++++++.++.+|+++|++.++++|+++++++++|+|.|+||||||||++||+
T Consensus 1 P~lk~~~-s~l~~i~lg~~~~~LGGS~~~q~~~~~~~~~P~v~d~~~~k~~~~~i~~li~~~lI~s~HDiSdGGL~~aL~ 79 (217)
T d1t3ta7 1 PQLSTED-NALLLIDLGKGHNALGATALAQVYRQLGDKPADVRDVAQLKGFYDAMQALVAARKLLAWHDRSDGGLLVTLA 79 (217)
T ss_dssp SCCCCSS-EEEEEEETTTTCCCCTTSHHHHHTTCCCSCCCCCCCHHHHHHHHHHHHHHHHTTCCSEEEECCTTHHHHHHH
T ss_pred CCCCCCC-CEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH
T ss_conf 9777799-989999889998872479999986350797919667899999987777542257178998637753899999
Q ss_pred HHHHCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCC--EEEEEEEECCCCEEEEECCEEEEE
Q ss_conf 978518728999808999845777605664349999368999999999883998--899999808991999999989885
Q 000572 1006 EMSFAGNYGITLDLNSEGNSLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVS--AEIIGQVNSSHSVEIKVDGLTHLN 1083 (1414)
Q Consensus 1006 EMa~ag~~G~~Idl~~~~~~~~~~LFsEs~G~Vi~V~~~~~~~v~~~l~~~gi~--~~~IG~v~~~~~l~i~~~g~~i~~ 1083 (1414)
||||+|++|++|+++....+++..||+|++|+|++|++++.++|.+.+++.++. +..||.++.++.+.|..+++.+++
T Consensus 80 EMaf~g~~G~~I~l~~~~~~~~~~LFsE~~g~vi~v~~~~~~~~~~~~~~~~i~~~~~~ig~~~~~~~~~i~~~~~~i~~ 159 (217)
T d1t3ta7 80 EMAFAGHCGVQVDIAALGDDHLAALFNEELGGVIQVRAEDRDAVEALLAQYGLADCVHYLGQALAGDRFVITANDQTVFS 159 (217)
T ss_dssp HHHHHHTSEEEEECGGGCSCHHHHHHCCCSEEEEEEEGGGHHHHHHHHHHTTCGGGEEEEEEEESSSEEEEEETTEEEEE
T ss_pred HHHCCCCCCEEEECCCCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCEEHH
T ss_conf 98645887148965644577076522267627999823248999999987698230787022356623799758917558
Q ss_pred CCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCCC--CCCEEEEECCCCCHHHC
Q ss_conf 03899999863200879863203321144420123468--98503630898620100
Q 000572 1084 EKTSLLRDMWEETSFELEKFQRLASCVESEKEGLKSRC--EPLWKLSFTPSLTDEKY 1138 (1414)
Q Consensus 1084 ~~l~~L~~~w~~~s~~l~~~~~~~~~~~~e~~~~~~~~--~~~~~l~~~~~~~~~~~ 1138 (1414)
.++.+|++.|+++||+|+++|+||.||++|++.+.++. +..++++|.+++++.+|
T Consensus 160 ~~i~~L~~~W~~tSy~i~~lrdnp~~A~eE~~~~~~~~~~~l~~~~~F~~~~~~~~p 216 (217)
T d1t3ta7 160 ESRTTLRVWWAETTWQMQRLRDNPQCADQEHEAKANDTDPGLNVKLSFDINEDIAAP 216 (217)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHTCTTCCCSCCBCSSCTTCCTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 789999999999789999953388889999986205778887544678986567899
|
| >d1vk3a3 d.139.1.1 (A:167-345) Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.6e-37 Score=251.71 Aligned_cols=175 Identities=20% Similarity=0.265 Sum_probs=157.9
Q ss_pred CCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCH
Q ss_conf 99999999999158876664278899866189988666653357999999999999999998322599039985997838
Q 000572 533 EPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGN 612 (1414)
Q Consensus 533 ~a~~GD~Ivv~G~~tgr~GlgGa~~ss~~~~~~~~~~~~~~Vq~~dp~~ek~l~~~i~~~~el~~~~~i~ai~DigaGGL 612 (1414)
.++|||+|+++|++||++|+||++++|..+... ....++||+.||+++++++++ +.++...++++||||+|.|||
T Consensus 2 ~akpGD~IiliG~~t~~~glgGs~~as~~~~~~--~~~~~~V~~~d~~~ek~~~~~---~~~l~~~~li~s~hDis~GGL 76 (179)
T d1vk3a3 2 ASRPGQVIVIFGGATGRDGIHGASFASEDLTGD--KATKLSIQVGDPFAEKMLIEA---FLEMVEEGLVEGAQDLGAGGV 76 (179)
T ss_dssp CCSTTCEEEEEESCBCSCC------------------CGGGCCCCCHHHHHHHHHH---HHHHHHHTCCSEEEECCTTHH
T ss_pred CCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHHHH---HHHHHHCCCCCEEEECCCCCH
T ss_conf 899999999988867878754799999886335--566666552457788777666---655442164201665477722
Q ss_pred HHHHHHHHC--CCEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEE
Q ss_conf 888998746--981999907877787882289996043452169999678978999999773997279999994883999
Q 000572 613 CNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVSMAVIGTISGEGRVVL 690 (1414)
Q Consensus 613 ~~al~Ela~--~~G~~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~i 690 (1414)
+++|.|||. ++|++|+++++|..+.+++++|+|+||+|+||+++|+|++.++|+++|+++++++++||+||+++++++
T Consensus 77 ~~al~Ema~~~~~G~~i~l~~i~~~~~~~~~~e~lfsEsq~R~vv~v~~~~~~~~~~~~~~~~~~~~~IG~vt~~~~l~i 156 (179)
T d1vk3a3 77 LSATSELVAKGNLGAIVHLDRVPLREPDMEPWEILISESQERMAVVTSPQKASRILEIARKHLLFGDVVAEVIEEPVYRV 156 (179)
T ss_dssp HHHHHHHHHHTTCEEEEEGGGSCBSSTTCCHHHHHHCCCSSEEEEEECGGGHHHHHHHHHHTTCEEEEEEEEESSCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEE
T ss_conf 57888998737966999871334344345741047715767279984426899999999983999337899954985999
Q ss_pred EECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCE
Q ss_conf 957410002579999999948721333408999720
Q 000572 691 VDSAAVQKCQSSGLPPPPPAVDLELERVLGDMPQKT 726 (1414)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~dl~~~~l~~~~p~~~ 726 (1414)
.+ ++++++|+|+++|. ++|.+.
T Consensus 157 ~~-------------~~~~ivdlpv~~L~-~aP~~~ 178 (179)
T d1vk3a3 157 MY-------------RNDLVMEVPVQLLA-NAPEED 178 (179)
T ss_dssp EE-------------TTEEEEEEEHHHHH-SCCCCC
T ss_pred EE-------------CCCEEEEEEHHHHC-CCCCCC
T ss_conf 98-------------99389983899972-899677
|
| >d1vk3a2 d.79.4.1 (A:346-507) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=9.2e-37 Score=250.33 Aligned_cols=148 Identities=16% Similarity=0.044 Sum_probs=129.9
Q ss_pred HHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 97099987502265402244585410023368878976838999845988137499985479988889999999999998
Q 000572 754 VLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEA 833 (1414)
Q Consensus 754 vL~~p~V~SK~~i~~qyDr~V~g~tv~~p~vGp~~~p~~DaAVi~~~~~~~~gia~s~g~~p~~~~~dP~~ga~~AV~ea 833 (1414)
.+.+.++. |+|||+||||+||++|+++ |++||||+++.. ..+++++++.+++++.+|||+||++||+|+
T Consensus 13 ~~~~~~~~-~~~v~~QYD~~V~~~Tv~~--------Pg~daaVv~i~~--~~~~ais~~~~~~~~~~dPy~Ga~~aV~Ea 81 (162)
T d1vk3a2 13 RVEFEEVN-AREVFEQYDHMVGTDTVVP--------PGFGAAVMRIKR--DGGYSLVTHSRADLALQDTYWGTLIAVLES 81 (162)
T ss_dssp CCCCEECC-HHHHHHTTTCCBSTTSSSC--------GGGSCEEEEEET--TEEEEEEEECCHHHHTTCHHHHHHHHHHHH
T ss_pred CCCCCCCC-CCHHHHHCCCCCCCCEECC--------CCCCCCEEEECC--CCCEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 33333023-3438886766327773347--------899861688757--872388841576122111788877899999
Q ss_pred HHCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEE
Q ss_conf 51011147654101112332233447887179999999999999999298102344322232226993000087389999
Q 000572 834 LTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISV 913 (1414)
Q Consensus 834 i~niaa~Ga~pl~~v~~s~n~~~p~~~~~~~~~l~~a~~gl~dac~~lgipivgGkdSls~~~~~~~~~i~~ppTlvisa 913 (1414)
+||+++|||+|++.+++ +||+||++. +.+|+++++||+++|++||+|+|||||||||++. ..++|||++|++
T Consensus 82 vrnl~a~GA~P~ai~d~-LnFg~Pe~~---~~~~~~~v~gl~~~~~~~~iPvVgGnvSlyN~~~----~~~I~PTp~i~~ 153 (162)
T d1vk3a2 82 VRKTLSVGAEPLAITNC-VNYGDPDVD---PVGLSAMMTALKNACEFSGVPVASGNASLYNTYQ----GKPIPPTLVVGM 153 (162)
T ss_dssp HHHHHHTTCEEEEEEEE-EECSCTTTC---HHHHHHHHHHHHHHHHHHTCCEEEEEEECCCEET----TEECCCEEEEEE
T ss_pred HHHHHHCCCHHHHHHHH-HHCCCCCCC---HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC----CCCCCCCCEEEE
T ss_conf 98755135167887876-526888998---8999999999999999809982155445405768----986898667999
Q ss_pred EEECCCC
Q ss_conf 9981899
Q 000572 914 YVTCPDI 920 (1414)
Q Consensus 914 ~G~v~d~ 920 (1414)
+|.+++.
T Consensus 154 ~G~v~~~ 160 (162)
T d1vk3a2 154 LGKVNPQ 160 (162)
T ss_dssp EEEECGG
T ss_pred EEEECCC
T ss_conf 8852157
|
| >d1t3ta3 d.284.1.2 (A:1-152) FGAM synthase PurL, PurS-like domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurS-like superfamily: PurS-like family: FGAM synthase PurL, PurS-like domain domain: FGAM synthase PurL, PurS-like domain species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=6.1e-32 Score=219.23 Aligned_cols=148 Identities=27% Similarity=0.348 Sum_probs=123.8
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC
Q ss_conf 99982799899889999999998350997112999999998138999988999999972056898767762023342104
Q 000572 93 VVHFYRIPLLQDSAAAELLKSVQKKISNQIVGLKTEHCFNIGLDSRISTKKLEVLKWLLQETYEPENLGTESFLEKKKQK 172 (1414)
Q Consensus 93 ~~~~~g~p~ls~~~~~~Ll~~~~~~~~~~V~~i~t~~~y~v~~~~~L~~~~~~~l~~LL~~~~~~~~~~~~~~~~~~~~~ 172 (1414)
|++++|.+++|+|+.++|+.++++. ...+.+++++|||+|+...++++++.++|.|||.+..... .. ..
T Consensus 2 M~il~G~~alS~fr~~~L~~~l~~~-~~~i~~i~~~~~y~v~~~~~l~~~~~~~L~~LL~~~~~~~-----~~-----~~ 70 (152)
T d1t3ta3 2 MEILRGSPALSAFRINKLLARFQAA-NLQVHNIYAEYVHFADLNAPLNDSEQAQLTRLLQYGPALS-----SH-----TP 70 (152)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHTT-TCCCCEEEEEEEEEEEESSCCCHHHHHHHHHHTCCSCCCC-----CC-----CC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHC-CCCCCEEEEEEEEEHHCCCCCCHHHHHHHHHHHCCCCCCC-----CC-----CC
T ss_conf 4996898758999999999999860-8862068888987311057899999999999867684334-----66-----86
Q ss_pred CCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCC---
Q ss_conf 88229999906987688465679999999099967818999999983278888568989987106653211114533---
Q 000572 173 GLKAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQDNQINDFAAMVHDRMTECVYTEKL--- 249 (1414)
Q Consensus 173 ~~~~~~i~V~pr~g~~~~~ss~a~~i~~~~gl~~v~rie~~~~y~i~~~~~~~~~~~~~~~~~l~d~mte~~~~~~~--- 249 (1414)
... .++|+||+||+|||||||++|+++|||..|.||||+++|.+.+. ....++...+.++|||||||++|....
T Consensus 71 -~~~-~~~V~PR~gtiSPWSSKAtdI~~~cGl~~V~RIERg~~y~~~~~-~~~~~~~~~~~~~L~DrMTE~v~~~~~~~~ 147 (152)
T d1t3ta3 71 -AGK-LLLVTPRPGTISPWSSKATDIAHNCGLQQVDRLERGVAYYIEAS-TLTAEQWRQVAAELHDRMMETVFSSLTDAE 147 (152)
T ss_dssp -CSE-EEEEEECTTCCCHHHHHHHHHHHHTTCTTEEEEEEEEEEEEECT-TCCHHHHHHHHHTTSCTTTEEEESSGGGGG
T ss_pred -CCC-EEEEEECCCCCCCHHHHHHHHHHHCCCCHHHEEEEEEEEEECCC-CCCHHHHHHHHHHCCCCCHHHHHCCHHHHH
T ss_conf -676-69996036501541888999999829830230200478884388-778899988776453776788866735688
Q ss_pred CCCCC
Q ss_conf 44444
Q 000572 250 TSFET 254 (1414)
Q Consensus 250 ~~f~~ 254 (1414)
.+|.|
T Consensus 148 ~lF~h 152 (152)
T d1t3ta3 148 KLFIH 152 (152)
T ss_dssp GGGCC
T ss_pred HHCCC
T ss_conf 60689
|
| >d1vk3a3 d.139.1.1 (A:167-345) Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 species: Thermotoga maritima [TaxId: 2336]
Probab=99.96 E-value=5.8e-29 Score=200.07 Aligned_cols=159 Identities=14% Similarity=0.187 Sum_probs=136.0
Q ss_pred CCCCCCEEEEEECCCC--CCCCCHHHHHH-HHHHCCCC---CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH
Q ss_conf 6799918999991899--66641689999-96201999---999999689999999999987245821998189883699
Q 000572 929 KLGDDGILLHIDLAKG--KRRLGGSALAQ-VFDQVGNE---SPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLV 1002 (1414)
Q Consensus 929 k~~Gd~~li~v~lg~~--~~~LGGS~l~~-~~~~~g~~---~P~v~d~~~lk~~~~~v~~li~~glV~A~hDvSdGGL~~ 1002 (1414)
++||| .||++ |.+ +.+||||.+++ .++..... +|.. |+..+++++++++++++++++.||||+|+|||++
T Consensus 3 akpGD-~Iili--G~~t~~~glgGs~~as~~~~~~~~~~~~V~~~-d~~~ek~~~~~~~~l~~~~li~s~hDis~GGL~~ 78 (179)
T d1vk3a3 3 SRPGQ-VIVIF--GGATGRDGIHGASFASEDLTGDKATKLSIQVG-DPFAEKMLIEAFLEMVEEGLVEGAQDLGAGGVLS 78 (179)
T ss_dssp CSTTC-EEEEE--ESCBCSCC----------------CGGGCCCC-CHHHHHHHHHHHHHHHHHTCCSEEEECCTTHHHH
T ss_pred CCCCC-EEEEE--CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHH
T ss_conf 99999-99998--88678787547999998863355666665524-5778877766665544216420166547772257
Q ss_pred HHHHHHHCCCEEEEEEECCCC-----CCHHHHHCCCCCCE-EEEEECCCHHHHHHHHHHCCCCEEEEEEEECCCCEEEEE
Q ss_conf 989978518728999808999-----84577760566434-999936899999999988399889999980899199999
Q 000572 1003 CTLEMSFAGNYGITLDLNSEG-----NSLFQTLFAEELGL-VLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKV 1076 (1414)
Q Consensus 1003 aL~EMa~ag~~G~~Idl~~~~-----~~~~~~LFsEs~G~-Vi~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i~~ 1076 (1414)
+|+|||+++++|++|+++.++ .++.++||||++|+ |++|++++.++|++++++.++++.+||+|++++.+++..
T Consensus 79 al~Ema~~~~~G~~i~l~~i~~~~~~~~~~e~lfsEsq~R~vv~v~~~~~~~~~~~~~~~~~~~~~IG~vt~~~~l~i~~ 158 (179)
T d1vk3a3 79 ATSELVAKGNLGAIVHLDRVPLREPDMEPWEILISESQERMAVVTSPQKASRILEIARKHLLFGDVVAEVIEEPVYRVMY 158 (179)
T ss_dssp HHHHHHHHTTCEEEEEGGGSCBSSTTCCHHHHHHCCCSSEEEEEECGGGHHHHHHHHHHTTCEEEEEEEEESSCEEEEEE
T ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEE
T ss_conf 88899873796699987133434434574104771576727998442689999999998399933789995498599998
Q ss_pred CCEEEEECCHHHHHH
Q ss_conf 998988503899999
Q 000572 1077 DGLTHLNEKTSLLRD 1091 (1414)
Q Consensus 1077 ~g~~i~~~~l~~L~~ 1091 (1414)
+++.+++.+++.|..
T Consensus 159 ~~~~ivdlpv~~L~~ 173 (179)
T d1vk3a3 159 RNDLVMEVPVQLLAN 173 (179)
T ss_dssp TTEEEEEEEHHHHHS
T ss_pred CCCEEEEEEHHHHCC
T ss_conf 993899838999728
|
| >d1t3ta1 a.5.10.1 (A:153-220) FGAM synthase PurL, linker domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: RuvA C-terminal domain-like superfamily: FGAM synthase PurL, linker domain family: FGAM synthase PurL, linker domain domain: FGAM synthase PurL, linker domain species: Salmonella typhimurium [TaxId: 90371]
Probab=99.90 E-value=3.9e-25 Score=175.41 Aligned_cols=67 Identities=40% Similarity=0.693 Sum_probs=64.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 89742897064579999999988579999955599999999864099998888997986301345540
Q 000572 257 VPEEVRFVPVMENGRKALEEINQEMGLAFDEQDLQYYTRLFKEDIKRNPTTVELFDIAQSNSEHSRHW 324 (1414)
Q Consensus 257 ~~~~~~~i~~~~~~~~~l~~~~~~~gLal~~~el~~~~~~f~~~l~R~Pt~~El~~~~q~wSEHCrhk 324 (1414)
+|+|+..||+++.++++|+++|+++||||+.+||+||++||++ ++|||||+||+||||+||||||||
T Consensus 2 eP~pv~~v~i~~~~~~~L~~~n~~~gLaL~~~e~~~i~~~f~~-~~R~PTd~EL~~~aQ~nSEHCrHK 68 (68)
T d1t3ta1 2 QPAPVSSVDLLGEGRQALIDANLRLGLALAEDEIDYLQEAFTK-LGRNPNDIELYMFAQANSEHCRHK 68 (68)
T ss_dssp CCCCCCBCCHHHHTTHHHHHHHHHTTCCCCHHHHHHHHHHHHH-HTSCCBHHHHHHHHHHTSHHHHCH
T ss_pred CCCCCEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 9998515547558999999999976888999999999999874-289988999999962443330699
|
| >d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: Pyridoxine biosynthesis protein 2, Pdx2 species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.89 E-value=1.7e-22 Score=158.36 Aligned_cols=200 Identities=17% Similarity=0.078 Sum_probs=114.2
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHCCHHH
Q ss_conf 99789999029976879999999984995299625666575469137489999199782433202312167785101179
Q 000572 1143 SKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1143 ~~~kVaVl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlpGG~s~~D~l~ag~~~a~~~l~~~~l~ 1222 (1414)
.+|||+||.+||.. ++...||+++|.....+...+ .+.+++++|+||||||+++++.+.. ......+.
T Consensus 1 ~~ikIGvl~l~G~~--~~~~~al~~lg~~~~~v~~~~---~~~~l~~~D~lIlPGgg~~~~~~~~-------~~~~~~~~ 68 (218)
T d2abwa1 1 SEITIGVLSLQGDF--EPHINHFIKLQIPSLNIIQVR---NVHDLGLCDGLVIPGGESTTVRRCC-------AYENDTLY 68 (218)
T ss_dssp CCEEEEEECTTSCC--HHHHHHHHTTCCTTEEEEEEC---SHHHHHTCSEEEECCSCHHHHHHHT-------THHHHHHH
T ss_pred CCCEEEEEECCCCH--HHHHHHHHHCCCCCEEEEEEC---CHHHHHHCCEEEECCCCCCHHHHHH-------HHHHCCCH
T ss_conf 99889999678869--999999998489961899949---9999840888997688863799998-------87745666
Q ss_pred HHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC-EEEEEEEEEECCCCCCCCCCCC
Q ss_conf 999998809998399990256998760964799988745789999987265159873-4985699998358982235888
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGR-FECRFSSVTIEDSPAIMLKGME 1301 (1414)
Q Consensus 1223 ~~i~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g~~~~~~~~~~~~p~l~~N~s~r-fe~r~v~v~i~~~~s~~l~g~~ 1301 (1414)
+.+.++..+.++|+||||+|||||++..--......................+..++ ....|..+.+.....+ +....
T Consensus 69 ~~i~~~~~~~gkPilGIC~G~QlL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 147 (218)
T d2abwa1 69 NALVHFIHVLKKPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGGLDITICRNFYGSQNDSFICSLNIISDSSA-FKKDL 147 (218)
T ss_dssp HHHHHHHHTSCCCEEEETHHHHHTEEEEECCCSCCTTGGGSCCCCEEEEEECCC----CCEEEEECEECCCCTT-CCTTC
T ss_pred HHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCCC-CCCCC
T ss_conf 78999998739859982377889987516775455432236522334320002457766454252355147743-35766
Q ss_pred CCEEEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC
Q ss_conf 96799998624651780790358897316936899836999976668999899867615998489859998567865665
Q 000572 1302 GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1302 g~~l~~~~~Hgegr~~~~~~~~~~~l~~~~~i~~~y~d~~g~~~~~yP~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~ 1381 (1414)
. ...+++.|+ +++..+. ..+...+.+ +++|. .-|++|. +||++|+|||||++..
T Consensus 148 ~-~~~~y~~h~---~~~~~~~--------~~~~a~~~~-----------~~~g~-~~i~av~--~~ni~G~QFHPE~s~d 201 (218)
T d2abwa1 148 T-AACIRAPYI---REILSDE--------VKVLATFSH-----------ESYGP-NIIAAVE--QNNCLGTVFHPELLPH 201 (218)
T ss_dssp E-EEEESCCEE---EEECCTT--------CEEEEEEEE-----------TTTEE-EEEEEEE--ETTEEEESSCGGGSSC
T ss_pred C-CEEEEEEEE---EEEECCC--------HHHHEEECC-----------CCCCC-EEEEEEE--CCCEEEEECCCEECCC
T ss_conf 5-136874478---9960587--------344023034-----------46797-1799995--5999999758840499
|
| >d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF species: Thermotoga maritima [TaxId: 2336]
Probab=99.89 E-value=6.4e-22 Score=154.65 Aligned_cols=193 Identities=17% Similarity=0.176 Sum_probs=117.1
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHCCHHHHH
Q ss_conf 78999902997687999999998499529962566657546913748999919978243320231216778510117999
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224 (1414)
Q Consensus 1145 ~kVaVl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlpGG~s~~D~l~ag~~~a~~~l~~~~l~~~ 1224 (1414)
|||+||. +|..+.+++.+||+++|.....+.... . .....+.+|+|||||+++|++.++ .|...++.+.
T Consensus 1 MKI~IiD-yg~gN~~si~~al~~~g~~~~~~~~~~-~-~~~~~~~~D~lIlPG~G~f~~~~~--------~l~~~~~~~~ 69 (200)
T d1k9vf_ 1 MRIGIIS-VGPGNIMNLYRGVKRASENFEDVSIEL-V-ESPRNDLYDLLFIPGVGHFGEGMR--------RLRENDLIDF 69 (200)
T ss_dssp CEEEEEC-SSSSCCHHHHHHHHHHTTTSSSCEEEE-E-SSSCSCCCSEEEECCCSCHHHHHH--------HHHHTTCHHH
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHCCCCCCCEEEE-E-CCHHHHCCCEEEECCHHHHHHHHH--------HHHCCCCCCC
T ss_conf 9899990-798689999999998530045113798-0-775760057479717078788887--------5310233121
Q ss_pred HHHHHHCCCCEEEEEEHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCC-EEEECCC-CCEEEEEEEEEECCCCCCCCCCCC
Q ss_conf 9998809998399990256998760964-799988745789999987-2651598-734985699998358982235888
Q 000572 1225 FQEFYKRPDTFSLGVCNGCQLMALLGWI-PGPQVGGVHGAGGDPSQP-RFVHNES-GRFECRFSSVTIEDSPAIMLKGME 1301 (1414)
Q Consensus 1225 i~~f~~r~~~~iLGIC~G~QlL~~lgli-p~~~g~~~~~~~~~~~~p-~l~~N~s-~rfe~r~v~v~i~~~~s~~l~g~~ 1301 (1414)
++++++ .++|+||||+|||+|++..-- +...+. .... ...++.. ......|....... ...
T Consensus 70 i~~~~~-~~~PiLGIClG~QlL~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 133 (200)
T d1k9vf_ 70 VRKHVE-DERYVVGVCLGMQLLFEESEEAPGVKGL--------SLIEGNVVKLRSRRLPHMGWNEVIFKD-------TFP 133 (200)
T ss_dssp HHHHHH-TTCEEEEETHHHHTTEEEETTSTTCCCC--------CCEEEEEEECSCSSCSEEEEEEEEESS-------SSC
T ss_pred CCCCCC-CCCEEEEEECCEEEEEEECCCCCCCCCC--------CCCCCCCCCCCCCCCCCCCCCCCCCCC-------CCC
T ss_conf 211134-5515898732426776540357643422--------111111021234555533220001113-------577
Q ss_pred CCEEEEEEEECCCEEEEC-CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCC
Q ss_conf 967999986246517807-9035889731693689983699997666899989986761599848985999856786566
Q 000572 1302 GSTLGVWAAHGEGRAYFP-DDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCF 1380 (1414)
Q Consensus 1302 g~~l~~~~~Hgegr~~~~-~~~~~~~l~~~~~i~~~y~d~~g~~~~~yP~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~ 1380 (1414)
... .++.|++ +.. .+.. ..+...| + |. .-+|++. ++|++|+|||||+|.
T Consensus 134 ~~~--~~~~hs~---~~~~~~~~-------~~~~~~~----------~-----~~-~~~a~v~--~~ni~GvQFHPEkS~ 183 (200)
T d1k9vf_ 134 NGY--YYFVHTY---RAVCEEEH-------VLGTTEY----------D-----GE-IFPSAVR--KGRILGFQFHPEKSS 183 (200)
T ss_dssp CEE--EEEEESE---EEEECGGG-------EEEEEEE----------T-----TE-EEEEEEE--ETTEEEESSBGGGSH
T ss_pred CEE--EEEEEEE---EECCCCCC-------EEEEEEE----------C-----CE-EEEEEEE--CCCEEEEECCCCCCC
T ss_conf 448--9996225---63034422-------3788877----------9-----90-8999998--499999958982346
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 541377899987788999993699999999861
Q 000572 1381 LMWQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1381 ~~~q~~~~p~~~~~~~~~~spw~~~F~n~~~~~ 1413 (1414)
. -|+++|+|+.+|+
T Consensus 184 ~-------------------~G~~ll~nFl~~~ 197 (200)
T d1k9vf_ 184 K-------------------IGRKLLEKVIECS 197 (200)
T ss_dssp H-------------------HHHHHHHHHHHHH
T ss_pred H-------------------HHHHHHHHHHHHH
T ss_conf 6-------------------0899999998666
|
| >d1vk3a2 d.79.4.1 (A:346-507) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 species: Thermotoga maritima [TaxId: 2336]
Probab=99.88 E-value=3.2e-23 Score=163.05 Aligned_cols=130 Identities=14% Similarity=0.134 Sum_probs=111.6
Q ss_pred CCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCC
Q ss_conf 99804643068632526875311116899876423358850799981113799888947889623466432200247996
Q 000572 353 PNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGS 432 (1414)
Q Consensus 353 ~~~~~~g~~Dnaavi~~~~~~~~~~~~~g~~a~~~~~~~~~~i~~kvEthn~ps~idP~~gA~tgvgg~irDi~amGrGA 432 (1414)
..+++++.++||||++. .++..++++++.+++++.+|||.||+.++++++||++|| ||
T Consensus 33 ~~~Tv~~Pg~daaVv~i--------------------~~~~~~ais~~~~~~~~~~dPy~Ga~~aV~Eavrnl~a~--GA 90 (162)
T d1vk3a2 33 GTDTVVPPGFGAAVMRI--------------------KRDGGYSLVTHSRADLALQDTYWGTLIAVLESVRKTLSV--GA 90 (162)
T ss_dssp STTSSSCGGGSCEEEEE--------------------ETTEEEEEEEECCHHHHTTCHHHHHHHHHHHHHHHHHHT--TC
T ss_pred CCCEECCCCCCCCEEEE--------------------CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC--CC
T ss_conf 77733478998616887--------------------578723888415761221117888778999999875513--51
Q ss_pred EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCC
Q ss_conf 04778678873588888999998999888999989969999999999999976919904224227953115898743337
Q 000572 433 FVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWL 512 (1414)
Q Consensus 433 ~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~Gi~d~~n~~GvPivgG~t~s~~~~~~~g~~~~~~ 512 (1414)
+|++++++|+||+|+.+ .+.|.++++|++++|+++|+|+|||++ ||||++.++ ..
T Consensus 91 ~P~ai~d~LnFg~Pe~~--------------------~~~~~~~v~gl~~~~~~~~iPvVgGnv-SlyN~~~~~----~I 145 (162)
T d1vk3a2 91 EPLAITNCVNYGDPDVD--------------------PVGLSAMMTALKNACEFSGVPVASGNA-SLYNTYQGK----PI 145 (162)
T ss_dssp EEEEEEEEEECSCTTTC--------------------HHHHHHHHHHHHHHHHHHTCCEEEEEE-ECCCEETTE----EC
T ss_pred HHHHHHHHHHCCCCCCC--------------------HHHHHHHHHHHHHHHHHHCCCCCCCEE-EECCCCCCC----CC
T ss_conf 67887876526888998--------------------899999999999999980998215544-540576898----68
Q ss_pred CCEEEEEEEEEEECCCC
Q ss_conf 74488999985607662
Q 000572 513 KPIMFSGGIGQIDHNHI 529 (1414)
Q Consensus 513 ~Pl~~~~~vG~v~~~~i 529 (1414)
.|++.++++|.+++.++
T Consensus 146 ~PTp~i~~~G~v~~~ki 162 (162)
T d1vk3a2 146 PPTLVVGMLGKVNPQKV 162 (162)
T ss_dssp CCEEEEEEEEEECGGGC
T ss_pred CCCCEEEEEEEECCCCC
T ss_conf 98667999885215759
|
| >d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: Hypothetical protein YaaE species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.86 E-value=1.4e-21 Score=152.50 Aligned_cols=90 Identities=27% Similarity=0.335 Sum_probs=74.7
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHCCHH
Q ss_conf 89978999902997687999999998499529962566657546913748999919978243320231216778510117
Q 000572 1142 TSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPL 1221 (1414)
Q Consensus 1142 ~~~~kVaVl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlpGG~s~~D~l~ag~~~a~~~l~~~~l 1221 (1414)
.++|||+||.++| +.+++.+||+++|++++++. .+.+++++|+||||||++. ..+. .+...++
T Consensus 4 ~~~mkIgii~~~G--n~~s~~~al~~~G~~~~~v~------~~~~l~~~D~lIlPGG~~~-~~~~--------~l~~~~l 66 (202)
T d1q7ra_ 4 QSNMKIGVLGLQG--AVREHVRAIEACGAEAVIVK------KSEQLEGLDGLVLPGGEST-TMRR--------LIDRYGL 66 (202)
T ss_dssp CCCCEEEEESCGG--GCHHHHHHHHHTTCEEEEEC------SGGGGTTCSEEEECCCCHH-HHHH--------HHHHTTC
T ss_pred CCCCEEEEEECCC--CHHHHHHHHHHCCCCEEEEC------CHHHHHCCCEEEECCCCCH-HHHH--------HHHHHHH
T ss_conf 4698799997899--89999999998799299989------9899712898998798847-9998--------7666678
Q ss_pred HHHHHHHHHCCCCEEEEEEHHHHHHHHC
Q ss_conf 9999998809998399990256998760
Q 000572 1222 LNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1222 ~~~i~~f~~r~~~~iLGIC~G~QlL~~l 1249 (1414)
.+.++++.+ .++|+||||+|+|+|++.
T Consensus 67 ~~~I~~~~~-~gkPiLGIClG~Qll~~~ 93 (202)
T d1q7ra_ 67 MEPLKQFAA-AGKPMFGTCAGLILLAKR 93 (202)
T ss_dssp HHHHHHHHH-TTCCEEEETTHHHHHEEE
T ss_pred HHHHHHHCC-CCCEEEEEEHHHHHHHHH
T ss_conf 998865222-231466520135776441
|
| >d1ka9h_ c.23.16.1 (H:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF species: Thermus thermophilus [TaxId: 274]
Probab=99.85 E-value=1.3e-19 Score=139.72 Aligned_cols=193 Identities=19% Similarity=0.155 Sum_probs=120.8
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHCCHHHHH
Q ss_conf 78999902997687999999998499529962566657546913748999919978243320231216778510117999
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQ 1224 (1414)
Q Consensus 1145 ~kVaVl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlpGG~s~~D~l~ag~~~a~~~l~~~~l~~~ 1224 (1414)
|||+||+ +|+.+..+..+||++.|+++.++. .+.+++++|++|+|||+++++.+. .+....+...
T Consensus 1 Mki~IiD-~G~gN~~si~~~l~~lg~~~~i~~------~~~~i~~~d~lIlpG~g~~~~~~~--------~~~~~~~~~~ 65 (195)
T d1ka9h_ 1 MKALLID-YGSGNLRSAAKALEAAGFSVAVAQ------DPKAHEEADLLVLPGQGHFGQVMR--------AFQESGFVER 65 (195)
T ss_dssp CEEEEEC-SSCSCHHHHHHHHHHTTCEEEEES------STTSCSSCSEEEECCCSCHHHHHH--------TTSSSCTHHH
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHCCCEEEEEC------CHHHHHHHHHHHCCCCCCCCCHHH--------HCCCCCCCCC
T ss_conf 9899990-797499999999998798199988------999999876541378756541333--------1123687311
Q ss_pred HHHHHHCCCCEEEEEEHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCCEEEE-CCCCCEEEEEEEEEECCCCCCCCCCCCC
Q ss_conf 9998809998399990256998760964799-9887457899999872651-5987349856999983589822358889
Q 000572 1225 FQEFYKRPDTFSLGVCNGCQLMALLGWIPGP-QVGGVHGAGGDPSQPRFVH-NESGRFECRFSSVTIEDSPAIMLKGMEG 1302 (1414)
Q Consensus 1225 i~~f~~r~~~~iLGIC~G~QlL~~lglip~~-~g~~~~~~~~~~~~p~l~~-N~s~rfe~r~v~v~i~~~~s~~l~g~~g 1302 (1414)
+..... .++|+||||.|||+|++.+.-... .+.. ........ .........|....... +......
T Consensus 66 ~~~~~~-~g~pilGiClG~qll~~~~~e~~~~~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 133 (195)
T d1ka9h_ 66 VRRHLE-RGLPFLGICVGMQVLYEGSEEAPGVRGLG-------LVPGEVRRFRAGRVPQMGWNALEFGG----AFAPLTG 133 (195)
T ss_dssp HHHHHH-TTCCEEECTHHHHTTSSEETTSTTCCCCC-------SSSSEEEECCSSSSSEEEEEECEECG----GGGGGTT
T ss_pred CCCCCC-CCCHHHHHHHHHHEEEECCCCCCCCCCCE-------EEECCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC
T ss_conf 110014-43112544321211220022454568715-------53011133311101321012211122----2222211
Q ss_pred CEEEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCC
Q ss_conf 67999986246517807903588973169368998369999766689998998676159984898599985678656654
Q 000572 1303 STLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLM 1382 (1414)
Q Consensus 1303 ~~l~~~~~Hgegr~~~~~~~~~~~l~~~~~i~~~y~d~~g~~~~~yP~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~ 1382 (1414)
..++ +.|+ ++...+.. ..++..| | |. .-+|++. .+|++|+|||||+|..
T Consensus 134 ~~~~--~~~~---~~~~~~~~-------~~~~~~~----------~-----~~-~~~a~v~--~~ni~GvQFHPEkS~~- 182 (195)
T d1ka9h_ 134 RHFY--FANS---YYGPLTPY-------SLGKGEY----------E-----GT-PFTALLA--KENLLAPQFHPEKSGK- 182 (195)
T ss_dssp CEEE--EEES---EECCCCTT-------CCEEEEE----------T-----TE-EEEEEEE--CSSEEEESSCTTSSHH-
T ss_pred CCCC--CCCC---EEEECCCC-------CEEEEEC----------C-----CC-EEEEEEE--CCCEEEEECCCCCCCH-
T ss_conf 2322--3442---35531553-------1023522----------8-----94-4999998--1999999689610668-
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 1377899987788999993699999999861
Q 000572 1383 WQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1383 ~q~~~~p~~~~~~~~~~spw~~~F~n~~~~~ 1413 (1414)
.|.+|++|+++|+
T Consensus 183 ------------------~G~~lL~nF~~~~ 195 (195)
T d1ka9h_ 183 ------------------AGLAFLALARRYF 195 (195)
T ss_dssp ------------------HHHHHHHHHHHHC
T ss_pred ------------------HHHHHHHHHHHHC
T ss_conf ------------------4899999999769
|
| >d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: Hypothetical protein YaaE species: Bacillus subtilis [TaxId: 1423]
Probab=99.84 E-value=1.9e-19 Score=138.69 Aligned_cols=175 Identities=18% Similarity=0.127 Sum_probs=105.5
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHCCHHHH
Q ss_conf 97899990299768799999999849952996256665754691374899991997824332023121677851011799
Q 000572 1144 KPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1144 ~~kVaVl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlpGG~s~~D~l~ag~~~a~~~l~~~~l~~ 1223 (1414)
.|||+||.++|. .+|...||+++|++++.+. .+.+++++|+||||||+++.. . ..+...++.+
T Consensus 1 m~~igv~~~~G~--~~~~~~al~~~G~~~~~i~------~~~~l~~~D~lIlPGG~~~~~-~--------~~~~~~~~~~ 63 (195)
T d2nv0a1 1 MLTIGVLGLQGA--VREHIHAIEACGAAGLVVK------RPEQLNEVDGLILPGGESTTM-R--------RLIDTYQFME 63 (195)
T ss_dssp CCEEEEECSSSC--CHHHHHHHHHTTCEEEEEC------SGGGGGGCSEEEECCSCHHHH-H--------HHHHHTTCHH
T ss_pred CCEEEEEECCCH--HHHHHHHHHHCCCCEEEEC------CHHHHHHCCEEEECCCCCCHH-H--------HHHHHCHHCC
T ss_conf 929999962882--9999999998799199989------989983188799779984479-9--------9744310010
Q ss_pred HHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCC-CEEEEEEEEEECCCCCCCCCCCCC
Q ss_conf 9999880999839999025699876096479998874578999998726515987-349856999983589822358889
Q 000572 1224 QFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESG-RFECRFSSVTIEDSPAIMLKGMEG 1302 (1414)
Q Consensus 1224 ~i~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g~~~~~~~~~~~~p~l~~N~s~-rfe~r~v~v~i~~~~s~~l~g~~g 1302 (1414)
.++++.+ .++|+||||+|+|+|++..--+...+. .. ......+...+ +....+. .+.++++.
T Consensus 64 ~I~~~~~-~g~pilGIC~G~Qll~~~~~g~~~~~l-----g~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~- 126 (195)
T d2nv0a1 64 PLREFAA-QGKPMFGTCAGLIILAKEIAGSDNPHL-----GL--LNVVVERNSFGRQVDSFEA--------DLTIKGLD- 126 (195)
T ss_dssp HHHHHHH-TTCCEEEETHHHHHHSBCCC----CCC-----CC--SCEEEECCCSCTTTSEEEE--------EECCTTCS-
T ss_pred HHHHHHH-HCCEEEECCCCHHHHHHHHCCCCCCCC-----CC--CCCCCCCCCCCCCCEEEEE--------EECCCCCC-
T ss_conf 3443322-021244005567999866055545456-----64--2211100122321003100--------10024799-
Q ss_pred CEEEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC
Q ss_conf 6799998624651780790358897316936899836999976668999899867615998489859998567865665
Q 000572 1303 STLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1303 ~~l~~~~~Hgegr~~~~~~~~~~~l~~~~~i~~~y~d~~g~~~~~yP~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~ 1381 (1414)
....+++.|+......+ +. -.+.++| + ..++++- +||++|+|||||++..
T Consensus 127 ~~~~~~~~h~~~~~~~~-~~--------~~vla~~-~-----------------~~~~a~~--~~ni~g~QFHPE~s~~ 176 (195)
T d2nv0a1 127 EPFTGVFIRAPHILEAG-EN--------VEVLSEH-N-----------------GRIVAAK--QGQFLGCSFHPELTED 176 (195)
T ss_dssp SCEEEEEESCCEEEEEC-TT--------CEEEEEE-T-----------------TEEEEEE--ETTEEEESSCTTSSSC
T ss_pred CCCEEEEEEEEEEEECC-CC--------CEEEEEE-C-----------------CEEEEEE--ECCEEEEEECCCCCCC
T ss_conf 98439998520887668-77--------5454569-9-----------------9999999--7999999839840598
|
| >d2z1ea2 d.139.1.1 (A:156-334) Hydrogenase expression/formation protein HypE {Thermococcus kodakaraensis [TaxId: 311400]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: Hydrogenase expression/formation protein HypE species: Thermococcus kodakaraensis [TaxId: 311400]
Probab=99.84 E-value=4.9e-20 Score=142.54 Aligned_cols=165 Identities=19% Similarity=0.149 Sum_probs=116.0
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
Q ss_conf 22489999999999915887666427889986618998866665335799999999999999999832259903998599
Q 000572 529 ISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQG 608 (1414)
Q Consensus 529 i~~~~a~~GD~Ivv~G~~tgr~GlgGa~~ss~~~~~~~~~~~~~~Vq~~dp~~ek~l~~~i~~~~el~~~~~i~ai~Dig 608 (1414)
+.|++|+|||.|+++| .+|.+|+++++...+...........+.. +. +.++..++...+.++||||+|
T Consensus 1 i~~sgAk~GD~I~vtg----~~G~~g~~l~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~i~a~~DiS 68 (179)
T d2z1ea2 1 VSDAGAKVGDAVLVSG----TIGDHGIALMSHREGIAFETELKSDVAPI-----WD---VVKAVAETIGWENIHAMKDPT 68 (179)
T ss_dssp CCTTCCCTTCEEEESS----CSSHHHHHHHHHHTTCCCSSCCCCCCCCC-----HH---HHHHHHHHHCGGGEEEEECCC
T ss_pred CCCCCCCCCCEEEEEC----CHHHHHHHHHHHHCCCCCCHHHHHHHHHH-----HH---HHHHHHHHHCCCCCEEEECCC
T ss_conf 9866787079999988----35589999999976965303478888610-----18---999999974247740776266
Q ss_pred CCCHHHHHHHHHC--CCEEEEEECCCCCCCCCCCHHHH-----HCCCCCCEEEEEECCCCHHHHHHHHHHC--CCCEEEE
Q ss_conf 7838888998746--98199990787778788228999-----6043452169999678978999999773--9972799
Q 000572 609 AGGNCNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEI-----WGAEYQEQDAVLVKPESRDLLQSICERE--RVSMAVI 679 (1414)
Q Consensus 609 aGGL~~al~Ela~--~~G~~Idl~~iP~~~~~l~p~ei-----~~sEsqer~ll~V~pe~~~~l~~i~~~~--~~~~~vI 679 (1414)
.|||+++|.|||. ++|++|+++++|+.+......+. |.++++.+|+++|+|++.+++.++++++ ++++++|
T Consensus 69 dgGL~~~L~eia~~s~~g~~I~~~~ip~~~~~~~~~~~~~~~~~~~~~~g~ll~~v~~~~~~~i~~~l~~~~~g~~~~vI 148 (179)
T d2z1ea2 69 RAGLSNALNEIARKSNVGILVREADIPIRPEVRAASEMLGISPYDVANEGKVVMVVAREYAEEALEAMRKTEKGRNAAII 148 (179)
T ss_dssp TTHHHHHHHHHHHHHTCEEEEEGGGSCCCHHHHHHHHHHTCCGGGSCCSSCCEEEECGGGHHHHHHHHHTSSTTTTCEEE
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 63157788888986498399821101057889987777410334433463313574788999999999857789896999
Q ss_pred EEEECCCE--EEEEECCCCCCCCCCCCCCCCCEEECCHH
Q ss_conf 99994883--99995741000257999999994872133
Q 000572 680 GTISGEGR--VVLVDSAAVQKCQSSGLPPPPPAVDLELE 716 (1414)
Q Consensus 680 G~vt~~~~--l~i~~~~~~~~~~~~~~~~~~~~~dl~~~ 716 (1414)
|+||+++. +++.... +++.++|+|..
T Consensus 149 G~Vt~~~~~~v~l~~~~-----------g~~r~ld~p~~ 176 (179)
T d2z1ea2 149 GEVIADYRGKVLLETGI-----------GGKRFMEPPEG 176 (179)
T ss_dssp EEEESSSTTCEEEECTT-----------SCEEECCCSSC
T ss_pred EEEECCCCCEEEEECCC-----------CCEEECCCCCC
T ss_conf 89972898789998699-----------99798889999
|
| >d1t3ta6 d.139.1.1 (A:430-616) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: FGAM synthase PurL, PurM-like module, C1 and C2 domains species: Salmonella typhimurium [TaxId: 90371]
Probab=99.83 E-value=5.1e-19 Score=135.95 Aligned_cols=159 Identities=18% Similarity=0.177 Sum_probs=129.1
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHH-HHHC----CCCCCCCCCHHHHHHHHHHHHH---HHHCCCCEEEEECCCCCHHH
Q ss_conf 99918999991899666416899999-6201----9999999996899999999999---87245821998189883699
Q 000572 931 GDDGILLHIDLAKGKRRLGGSALAQV-FDQV----GNESPDLEDVPYLKRVFETVQD---LIGDELVSTGHDISDGGLLV 1002 (1414)
Q Consensus 931 ~Gd~~li~v~lg~~~~~LGGS~l~~~-~~~~----g~~~P~v~d~~~lk~~~~~v~~---li~~glV~A~hDvSdGGL~~ 1002 (1414)
.|| .+|++.-..++..+||..++.. ++.. ....-++.||...|++.+++++ +...+++.++||.+.|||..
T Consensus 3 vG~-~ii~vG~~tgrdGigGas~sS~~~~~~~~~~~~~aVQ~gdP~~ek~l~~~~~~~~e~~~~~~i~~i~D~GAGGl~~ 81 (187)
T d1t3ta6 3 VGA-KLIVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGLSN 81 (187)
T ss_dssp TTC-EEEEEESCBCSCC-------------------CTTCCCCCHHHHHHHHHHHHHHHTTGGGCCEEEEEECCTTTHHH
T ss_pred CCC-EEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC
T ss_conf 899-9999779878567770887535432665445655346699899989999999999860778636750579983120
Q ss_pred HHHHHHHCCCEEEEEEECCC-----CCCHHHHHCCCCCCE-EEEEECCCHHHHHHHHHHCCCCEEEEEEEECCCCEEEEE
Q ss_conf 98997851872899980899-----984577760566434-999936899999999988399889999980899199999
Q 000572 1003 CTLEMSFAGNYGITLDLNSE-----GNSLFQTLFAEELGL-VLEVSKSNLDTVSKKLHDAGVSAEIIGQVNSSHSVEIKV 1076 (1414)
Q Consensus 1003 aL~EMa~ag~~G~~Idl~~~-----~~~~~~~LFsEs~G~-Vi~V~~~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i~~ 1076 (1414)
++.||+..++.|++|+|+++ +..|++.|+||++.+ ++.|+|++.+++.+++++.++++++||+|++++.+.+..
T Consensus 82 a~~Ema~~~g~G~~i~Ld~Vp~~~~~m~p~EI~~SESQERm~~~v~~~~~~~~~~i~~k~~~~~~vIG~vt~~~~~~v~~ 161 (187)
T d1t3ta6 82 AMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDELCKRERAPYAVIGDATEEQHLSLHD 161 (187)
T ss_dssp HHHHHHHHTTCEEEEEGGGSCBSCTTCCHHHHHHCCCSSEEEEEECGGGHHHHHHHHHHHTCCEEEEEEEESSCEEEEEE
T ss_pred CCHHHHHCCCCEEEEECHHCCCCCCCCCHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEE
T ss_conf 23888850797489977110045645386888631700042788650678999999998189837999870177699996
Q ss_pred --CCEEEEECCHHHHH
Q ss_conf --99898850389999
Q 000572 1077 --DGLTHLNEKTSLLR 1090 (1414)
Q Consensus 1077 --~g~~i~~~~l~~L~ 1090 (1414)
+++.+++.+++.|.
T Consensus 162 ~~~ge~vvdlpl~~L~ 177 (187)
T d1t3ta6 162 NHFDNQPIDLPLDVLL 177 (187)
T ss_dssp TTTTEEEEEEEHHHHT
T ss_pred CCCCCEEEEEEHHHHC
T ss_conf 4689989996989976
|
| >d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: GMP synthase subunit A, GuaAA species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.80 E-value=8.6e-18 Score=128.06 Aligned_cols=185 Identities=21% Similarity=0.270 Sum_probs=117.8
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCC-HHHHHCCCCHHHHHHHCCHHHH
Q ss_conf 789999029976879999999984995299625666575469137489999199782-4332023121677851011799
Q 000572 1145 PKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSY-ADVLDSAKGWSASIRFNQPLLN 1223 (1414)
Q Consensus 1145 ~kVaVl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlpGG~s~-~D~l~ag~~~a~~~l~~~~l~~ 1223 (1414)
+||+|+.+...+ -+..+++|++.|.++.+++. |. ...+++.+|++||+||... .|... ...
T Consensus 2 ~ki~iiD~g~~~-~~~i~r~l~~lg~~~~i~~~-d~--~~~~~~~~dgiIl~Gg~~~~~~~~~--------------~~~ 63 (196)
T d2a9va1 2 LKIYVVDNGGQW-THREWRVLRELGVDTKIVPN-DI--DSSELDGLDGLVLSGGAPNIDEELD--------------KLG 63 (196)
T ss_dssp CBEEEEEESCCT-TCHHHHHHHHTTCBCCEEET-TS--CGGGGTTCSEEEEEEECSCGGGTGG--------------GHH
T ss_pred CEEEEEECCCCH-HHHHHHHHHHCCCEEEEEEC-CC--CHHHHHCCCCEEEECCCCCCCCCCC--------------HHH
T ss_conf 889999898729-99999999978986999939-89--9899726880799336531110210--------------245
Q ss_pred HHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCC
Q ss_conf 99998809998399990256998760964799988745789999987265159873498569999835898223588896
Q 000572 1224 QFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGS 1303 (1414)
Q Consensus 1224 ~i~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g~~~~~~~~~~~~p~l~~N~s~rfe~r~v~v~i~~~~s~~l~g~~g~ 1303 (1414)
.+.+++...++|+||||+|+|+|+... . |. ..+.. .....|..+.+. ..+.+|+++ ..
T Consensus 64 ~l~~~~~~~~~PilGIC~G~Qll~~~~--g---g~-------------~~~~~--~~~~~~~~~~~~-~~~~l~~~~-~~ 121 (196)
T d2a9va1 64 SVGKYIDDHNYPILGICVGAQFIALHF--G---AS-------------VVKAK--HPEFGKTKVSVM-HSENIFGGL-PS 121 (196)
T ss_dssp HHHHHHHHCCSCEEEETHHHHHHHHHT--T---CE-------------EEEEE--EEEEEEEEEEES-CCCGGGTTC-CS
T ss_pred HHHHHHHHCCCEEEEEEHHHHHHHHCC--C---CC-------------CCCCC--CCCCCCCEEEEE-CCCCCCCCC-CC
T ss_conf 577777525815897600003332103--4---44-------------32111--100365058872-688301489-98
Q ss_pred EEEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCC
Q ss_conf 79999862465178079035889731693689983699997666899989986761599848985999856786566541
Q 000572 1304 TLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMW 1383 (1414)
Q Consensus 1304 ~l~~~~~Hgegr~~~~~~~~~~~l~~~~~i~~~y~d~~g~~~~~yP~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~ 1383 (1414)
.++++..|++.- ...+. +...+.+ +.++ .++++.+.+.+++|+|||||...-
T Consensus 122 ~~~~~~~H~~~v--~~~~~--------~~~v~a~-------------~~~~---~v~ai~~~~~~i~gvQfHPE~~~s-- 173 (196)
T d2a9va1 122 EITVWENHNDEI--INLPD--------DFTLAAS-------------SATC---QVQGFYHKTRPIYATQFHPEVEHT-- 173 (196)
T ss_dssp EEEEEEEEEEEE--ESCCT--------TEEEEEE-------------CSSC---SCSEEEESSSSEEEESSCTTSTTS--
T ss_pred CEEEEECCEEEE--EECCC--------CCCEEEC-------------CCCC---CHHEEEECCCCEEEEEECCCCCCC--
T ss_conf 559984032699--76787--------6622321-------------5566---332079899989999928603898--
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 377899987788999993699999999861
Q 000572 1384 QYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1384 q~~~~p~~~~~~~~~~spw~~~F~n~~~~~ 1413 (1414)
+ -+.+||+|+..-|
T Consensus 174 -----------~-----~G~~il~~F~~~~ 187 (196)
T d2a9va1 174 -----------Q-----YGRDIFRNFIGIC 187 (196)
T ss_dssp -----------T-----THHHHHHHHHHHH
T ss_pred -----------C-----CHHHHHHHHHHHH
T ss_conf -----------0-----0999999999999
|
| >d1t3ta7 d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: FGAM synthase PurL, PurM-like module, C1 and C2 domains species: Salmonella typhimurium [TaxId: 90371]
Probab=99.80 E-value=2.7e-18 Score=131.29 Aligned_cols=157 Identities=16% Similarity=0.168 Sum_probs=126.2
Q ss_pred CCCCEEEEE--CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCH
Q ss_conf 999999999--158876664278899866189988666653357999999999999999998322599039985997838
Q 000572 535 DIGMLVVKI--GGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQGAGGN 612 (1414)
Q Consensus 535 ~~GD~Ivv~--G~~tgr~GlgGa~~ss~~~~~~~~~~~~~~Vq~~dp~~ek~l~~~i~~~~el~~~~~i~ai~DigaGGL 612 (1414)
.+|+.|+++ |. ++..|||+.++.. .+.. .....++.|+...+++ ++.+.++..+++|.|+||+|.|||
T Consensus 5 ~~~s~l~~i~lg~--~~~~LGGS~~~q~-~~~~----~~~~P~v~d~~~~k~~---~~~i~~li~~~lI~s~HDiSdGGL 74 (217)
T d1t3ta7 5 TEDNALLLIDLGK--GHNALGATALAQV-YRQL----GDKPADVRDVAQLKGF---YDAMQALVAARKLLAWHDRSDGGL 74 (217)
T ss_dssp CSSEEEEEEETTT--TCCCCTTSHHHHH-TTCC----CSCCCCCCCHHHHHHH---HHHHHHHHHTTCCSEEEECCTTHH
T ss_pred CCCCEEEEEECCC--CCCCCCHHHHHHH-HHHH----CCCCCCCCCHHHHHHH---HHHHHHHHCCCCEEEEEECCCCHH
T ss_conf 7999899998899--9887247999998-6350----7979196678999999---877775422571789986377538
Q ss_pred HHHHHHHHC--CCEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCC--EEEEEEEECCCEE
Q ss_conf 888998746--981999907877787882289996043452169999678978999999773997--2799999948839
Q 000572 613 CNVVKEIIY--PKGAEIDIRAIIVGDHTLSVLEIWGAEYQEQDAVLVKPESRDLLQSICERERVS--MAVIGTISGEGRV 688 (1414)
Q Consensus 613 ~~al~Ela~--~~G~~Idl~~iP~~~~~l~p~ei~~sEsqer~ll~V~pe~~~~l~~i~~~~~~~--~~vIG~vt~~~~l 688 (1414)
+.+|.|||. ++|++|+++.+. .+++++|+||.+.|+ +.|++++.+++++++++.++. +..||.++.++.+
T Consensus 75 ~~aL~EMaf~g~~G~~I~l~~~~-----~~~~~~LFsE~~g~v-i~v~~~~~~~~~~~~~~~~i~~~~~~ig~~~~~~~~ 148 (217)
T d1t3ta7 75 LVTLAEMAFAGHCGVQVDIAALG-----DDHLAALFNEELGGV-IQVRAEDRDAVEALLAQYGLADCVHYLGQALAGDRF 148 (217)
T ss_dssp HHHHHHHHHHHTSEEEEECGGGC-----SCHHHHHHCCCSEEE-EEEEGGGHHHHHHHHHHTTCGGGEEEEEEEESSSEE
T ss_pred HHHHHHHHCCCCCCEEEECCCCC-----CCHHHHHHCCCCCEE-EEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCCEE
T ss_conf 99999986458871489656445-----770765222676279-998232489999999876982307870223566237
Q ss_pred EEEECCCCCCCCCCCCCCCCCEEECCHHHHHC
Q ss_conf 99957410002579999999948721333408
Q 000572 689 VLVDSAAVQKCQSSGLPPPPPAVDLELERVLG 720 (1414)
Q Consensus 689 ~i~~~~~~~~~~~~~~~~~~~~~dl~~~~l~~ 720 (1414)
.+.. +++.+++.+++.|..
T Consensus 149 ~i~~-------------~~~~i~~~~i~~L~~ 167 (217)
T d1t3ta7 149 VITA-------------NDQTVFSESRTTLRV 167 (217)
T ss_dssp EEEE-------------TTEEEEEEEHHHHHH
T ss_pred EEEE-------------CCCEEHHHHHHHHHH
T ss_conf 9975-------------891755878999999
|
| >d2z1ea2 d.139.1.1 (A:156-334) Hydrogenase expression/formation protein HypE {Thermococcus kodakaraensis [TaxId: 311400]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: Hydrogenase expression/formation protein HypE species: Thermococcus kodakaraensis [TaxId: 311400]
Probab=99.72 E-value=1.9e-16 Score=119.32 Aligned_cols=156 Identities=19% Similarity=0.142 Sum_probs=104.3
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHH-HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH
Q ss_conf 388866799918999991899666416899999-6201999999999689999999999987245821998189883699
Q 000572 924 VTPDLKLGDDGILLHIDLAKGKRRLGGSALAQV-FDQVGNESPDLEDVPYLKRVFETVQDLIGDELVSTGHDISDGGLLV 1002 (1414)
Q Consensus 924 itp~~k~~Gd~~li~v~lg~~~~~LGGS~l~~~-~~~~g~~~P~v~d~~~lk~~~~~v~~li~~glV~A~hDvSdGGL~~ 1002 (1414)
+++..+++|| +|++ .|. ...+|..+... ++........- +....+...+.+.+++..+.++||||+|||||+.
T Consensus 1 i~~sgAk~GD--~I~v-tg~--~G~~g~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~a~~DiSdgGL~~ 74 (179)
T d2z1ea2 1 VSDAGAKVGD--AVLV-SGT--IGDHGIALMSHREGIAFETELKS-DVAPIWDVVKAVAETIGWENIHAMKDPTRAGLSN 74 (179)
T ss_dssp CCTTCCCTTC--EEEE-SSC--SSHHHHHHHHHHTTCCCSSCCCC-CCCCCHHHHHHHHHHHCGGGEEEEECCCTTHHHH
T ss_pred CCCCCCCCCC--EEEE-ECC--HHHHHHHHHHHHCCCCCCHHHHH-HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHH
T ss_conf 9866787079--9999-883--55899999999769653034788-8861018999999974247740776266631577
Q ss_pred HHHHHHHCCCEEEEEEECCCCCCHH----------HHHCCCCCC-EEEEEECCCHHHHHHHHHH--CCCCEEEEEEEECC
Q ss_conf 9899785187289998089998457----------776056643-4999936899999999988--39988999998089
Q 000572 1003 CTLEMSFAGNYGITLDLNSEGNSLF----------QTLFAEELG-LVLEVSKSNLDTVSKKLHD--AGVSAEIIGQVNSS 1069 (1414)
Q Consensus 1003 aL~EMa~ag~~G~~Idl~~~~~~~~----------~~LFsEs~G-~Vi~V~~~~~~~v~~~l~~--~gi~~~~IG~v~~~ 1069 (1414)
+|.|||.+|++|++|+++.++..+. ..|++++.| ++++|++++.+++++.++. .|+++++||+|+++
T Consensus 75 ~L~eia~~s~~g~~I~~~~ip~~~~~~~~~~~~~~~~~~~~~~g~ll~~v~~~~~~~i~~~l~~~~~g~~~~vIG~Vt~~ 154 (179)
T d2z1ea2 75 ALNEIARKSNVGILVREADIPIRPEVRAASEMLGISPYDVANEGKVVMVVAREYAEEALEAMRKTEKGRNAAIIGEVIAD 154 (179)
T ss_dssp HHHHHHHHHTCEEEEEGGGSCCCHHHHHHHHHHTCCGGGSCCSSCCEEEECGGGHHHHHHHHHTSSTTTTCEEEEEEESS
T ss_pred HHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCCCEEEEEEEECC
T ss_conf 88888986498399821101057889987777410334433463313574788999999999857789896999899728
Q ss_pred CC--EEEEE--CCEEEEECC
Q ss_conf 91--99999--998988503
Q 000572 1070 HS--VEIKV--DGLTHLNEK 1085 (1414)
Q Consensus 1070 ~~--l~i~~--~g~~i~~~~ 1085 (1414)
+. +.+.. +++.+++.+
T Consensus 155 ~~~~v~l~~~~g~~r~ld~p 174 (179)
T d2z1ea2 155 YRGKVLLETGIGGKRFMEPP 174 (179)
T ss_dssp STTCEEEECTTSCEEECCCS
T ss_pred CCCEEEEECCCCCEEECCCC
T ss_conf 98789998699997988899
|
| >d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: Anthranilate synthase GAT subunit, TrpG species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.71 E-value=1.7e-15 Score=113.27 Aligned_cols=191 Identities=13% Similarity=0.050 Sum_probs=113.3
Q ss_pred EEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHCCHHHHHH
Q ss_conf 89999029976879999999984995299625666575469137489999199782433202312167785101179999
Q 000572 1146 KVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQF 1225 (1414)
Q Consensus 1146 kVaVl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlpGG~s~~D~l~ag~~~a~~~l~~~~l~~~i 1225 (1414)
+++|+..+.+.. +-.+++|++.|.++.+++.++........-.++++++.||......... ......+
T Consensus 3 ~~liiD~~dsft-~Ni~~~l~~lG~~~~vi~~d~~~~~~i~~~~~~gvilsgGp~~~~~~~~-----------~~~~~~i 70 (195)
T d1qdlb_ 3 LTLIIDNYDSFV-YNIAQIVGELGSYPIVIRNDEISIKGIERIDPDRLIISPGPGTPEKRED-----------IGVSLDV 70 (195)
T ss_dssp EEEEEECSCSSH-HHHHHHHHHTTCEEEEEETTTSCHHHHHHHCCSEEEECCCSSCTTSHHH-----------HTTHHHH
T ss_pred EEEEEECCCCHH-HHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC-----------CCCCHHH
T ss_conf 799997888369-9999999868994899948978999998448883002798776411001-----------3432666
Q ss_pred HHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEE
Q ss_conf 99880999839999025699876096479998874578999998726515987349856999983589822358889679
Q 000572 1226 QEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTL 1305 (1414)
Q Consensus 1226 ~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g~~~~~~~~~~~~p~l~~N~s~rfe~r~v~v~i~~~~s~~l~g~~g~~l 1305 (1414)
.+++. .++|+||||+|+|+|+.. .. +. +.++..+.+...+.........+..|.++ ...+
T Consensus 71 ~~~~~-~~~PiLGIClG~Qll~~~--~G---~~-------------v~~~~~~~~~~~~~~~~~~~~~~~lf~~~-~~~~ 130 (195)
T d1qdlb_ 71 IKYLG-KRTPILGVCLGHQAIGYA--FG---AK-------------IRRARKVFHGKISNIILVNNSPLSLYYGI-AKEF 130 (195)
T ss_dssp HHHHT-TTSCEEEETHHHHHHHHH--TT---CE-------------EEEEEEEEEEEEEEEEECCSSCCSTTTTC-CSEE
T ss_pred HHHHC-CCCCEEEEEHHHHHHHHC--CC---CE-------------EEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCC
T ss_conf 65303-798778861335356530--69---87-------------99503434432100001112222343589-8663
Q ss_pred EEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCC
Q ss_conf 99986246517807903588973169368998369999766689998998676159984898599985678656654137
Q 000572 1306 GVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQY 1385 (1414)
Q Consensus 1306 ~~~~~Hgegr~~~~~~~~~~~l~~~~~i~~~y~d~~g~~~~~yP~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~q~ 1385 (1414)
+++..|+.- +..... ...+..... ....++|+...+.+++|+|||||++.-.
T Consensus 131 ~~~~~h~~~---~~~~~~------~~~~~~~~~----------------~~~~i~ai~~~~~~i~GvQFHPE~~~s~--- 182 (195)
T d1qdlb_ 131 KATRYHSLV---VDEVHR------PLIVDAISA----------------EDNEIMAIHHEEYPIYGVQFHPESVGTS--- 182 (195)
T ss_dssp EEEEEEEEE---EECCCT------TEEEEEEES----------------SSCCEEEEEESSSSEEEESSBTTSTTCT---
T ss_pred EEEECCEEE---EECCCC------CCCCCEECC----------------CCCCEEEEEECCCCEEEEECCCCCCCCC---
T ss_conf 465012034---310146------741100016----------------9986788998999899998488778996---
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 78999877889999936999999998
Q 000572 1386 PWYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1386 ~~~p~~~~~~~~~~spw~~~F~n~~~ 1411 (1414)
-++++|+|+..
T Consensus 183 ---------------~G~~il~nFl~ 193 (195)
T d1qdlb_ 183 ---------------LGYKILYNFLN 193 (195)
T ss_dssp ---------------THHHHHHHHHH
T ss_pred ---------------CHHHHHHHHHH
T ss_conf ---------------66899999996
|
| >d1o1ya_ c.23.16.1 (A:) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: Hypothetical protein TM1158 species: Thermotoga maritima [TaxId: 2336]
Probab=99.69 E-value=5.2e-15 Score=110.14 Aligned_cols=180 Identities=16% Similarity=0.158 Sum_probs=111.6
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHCC-CCHHHHHHHCCHH
Q ss_conf 997899990299768799999999849952996256665754691374899991997824332023-1216778510117
Q 000572 1143 SKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSA-KGWSASIRFNQPL 1221 (1414)
Q Consensus 1143 ~~~kVaVl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlpGG~s~~D~l~ag-~~~a~~~l~~~~l 1221 (1414)
..|||+|+.-.-......+...|++.|++...+.......-+..+++||+||++||... +.+.. ..|. ...
T Consensus 2 ~~mrvli~qh~~~e~~G~~~~~l~~~g~~~~~~~~~~~~~~p~~l~~~d~iii~Ggp~~--~~d~~~~~~~------~~~ 73 (230)
T d1o1ya_ 2 HHVRVLAIRHVEIEDLGMMEDIFREKNWSFDYLDTPKGEKLERPLEEYSLVVLLGGYMG--AYEEEKYPFL------KYE 73 (230)
T ss_dssp CCCEEEEECSSTTSSCTHHHHHHHHTTCEEEEECGGGTCCCSSCGGGCSEEEECCCSCC--TTCTTTCTHH------HHH
T ss_pred CCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCEEEECCCCCC--CCCCHHHHHH------HHH
T ss_conf 95089999799998937999999978997999978998768766433788998299765--5641004555------789
Q ss_pred HHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCC
Q ss_conf 99999988099983999902569987609647999887457899999872651598734985699998358982235888
Q 000572 1222 LNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGME 1301 (1414)
Q Consensus 1222 ~~~i~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g~~~~~~~~~~~~p~l~~N~s~rfe~r~v~v~i~~~~s~~l~g~~ 1301 (1414)
.+.++..++ .++|+||||.|+|+|+.. +. |. ..+|..+.+ -.+..+.+ ..++++|+++.
T Consensus 74 ~~~i~~~~~-~~~PilGIC~G~Qlla~a--lG---g~-------------V~~~~~~~~-~~~~~~~~-~~~~~l~~~~~ 132 (230)
T d1o1ya_ 74 FQLIEEILK-KEIPFLGICLGSQMLAKV--LG---AS-------------VYRGKNGEE-IGWYFVEK-VSDNKFFREFP 132 (230)
T ss_dssp HHHHHHHHH-HTCCEEEETHHHHHHHHH--TT---CC-------------EEECTTCCE-EEEEEEEE-CCCCGGGTTSC
T ss_pred HHHHHHHHH-HCCEEEEEECCHHHHHHH--HC---CC-------------CCCCCCCCC-CCCCCCCC-CCCHHHHCCCC
T ss_conf 999999997-311078760579999998--44---35-------------422334543-22221001-34313330487
Q ss_pred CCEEEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC
Q ss_conf 96799998624651780790358897316936899836999976668999899867615998489859998567865665
Q 000572 1302 GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1302 g~~l~~~~~Hgegr~~~~~~~~~~~l~~~~~i~~~y~d~~g~~~~~yP~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~ 1381 (1414)
..++++..|++ .+.. +.. ..+.+ . ++.. .+.++.. ||++|+|||||-...
T Consensus 133 -~~~~~~~~H~d-~~~l--p~~-------~~~la-~-------------s~~~---~~qa~~~--~~~~g~QfHPE~~~~ 182 (230)
T d1o1ya_ 133 -DRLRVFQWHGD-TFDL--PRR-------ATRVF-T-------------SEKY---ENQGFVY--GKAVGLQFHIEVGAR 182 (230)
T ss_dssp -SEEEEEEEESE-EECC--CTT-------CEEEE-E-------------CSSC---SCSEEEE--TTEEEESSBSSCCHH
T ss_pred -CCCEEEEECCE-EEEE--CCC-------HHHHH-H-------------HCCC---CEEEEEE--CCEEEEEECCCCCHH
T ss_conf -65358873011-1221--211-------23443-2-------------0588---5478986--687589748878989
|
| >d3c9ua1 d.79.4.1 (A:1-137) Thiamine monophosphate kinase (ThiL) N-terminal domain {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: Thiamine monophosphate kinase (ThiL) N-terminal domain species: Aquifex aeolicus [TaxId: 63363]
Probab=99.69 E-value=1.7e-16 Score=119.74 Aligned_cols=134 Identities=9% Similarity=-0.016 Sum_probs=99.4
Q ss_pred CCHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHH
Q ss_conf 50319999998721299980464306863252687531111689987642335885079998111379988894788962
Q 000572 337 MVRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAET 416 (1414)
Q Consensus 337 ~~~~lf~~i~~~~~~~~~~~~~g~~Dnaavi~~~~~~~~~~~~~g~~a~~~~~~~~~~i~~kvEthn~ps~idP~~gA~t 416 (1414)
.+.+||++|+...+..+.. +++||||+++.... .++.+ +-..+|..|||...+||..|++
T Consensus 4 ~~lgE~~lI~~l~~~~~~~---~iGDDaavi~~~~~-~lv~s----------------tD~~~~~vhf~~~~~~~~iG~~ 63 (137)
T d3c9ua1 4 KELGEFGLIDLIKKTLESK---VIGDDTAPVEYCSK-KLLLT----------------TDVLNEGVHFLRSYIPEAVGWK 63 (137)
T ss_dssp HHHCHHHHHHHHHHHHTCS---STTSSSEEEEETTE-EEEEE----------------EEEEEBTTTBCTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCC---CCCCCEEEEECCCC-CEEEE----------------ECCCCCEEEEECCCCHHHHHHH
T ss_conf 5378799999998547788---99878899972997-48999----------------6761232442124668899999
Q ss_pred CCCCCCCCHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEE
Q ss_conf 34664322002479960477867887358888899999899988899998996999999999999997691990422422
Q 000572 417 GAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYT 496 (1414)
Q Consensus 417 gvgg~irDi~amGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~Gi~d~~n~~GvPivgG~t 496 (1414)
++..++||++|| ||+|++++.++.+ |.. .+.+.++++.+|+.+.|+++|++++||||
T Consensus 64 a~~~~~SDI~am--Ga~P~~~~~sl~l-----p~~----------------~~~~~~~~~~~Gi~~~~~~~~~~liGGdt 120 (137)
T d3c9ua1 64 AISVNVSDVIAN--GGLPKWALISLNL-----PED----------------LEVSYVERFYIGVKRACEFYKCEVVGGNI 120 (137)
T ss_dssp HHHHHHHHHHHT--TCEEEEEEEEEEE-----CTT----------------SBHHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHC--CCCCCEEEEEEEC-----CCC----------------CCHHHHHHHHHHHHHHHEEECEEEECCCC
T ss_conf 865003226652--8834145766505-----767----------------63667688874353200050709981123
Q ss_pred EEECCCCCCCCCCCCCCCEEEEEEEEEEE
Q ss_conf 79531158987433377448899998560
Q 000572 497 RTFGMRLPSGQRREWLKPIMFSGGIGQID 525 (1414)
Q Consensus 497 ~s~~~~~~~g~~~~~~~Pl~~~~~vG~v~ 525 (1414)
.. .....+.++++|.++
T Consensus 121 ~~------------~~~l~is~t~~G~~e 137 (137)
T d3c9ua1 121 SK------------SEKIGISVFLVGETE 137 (137)
T ss_dssp EE------------CSSCEEEEEEEEEES
T ss_pred CC------------CCCEEEEEEEEEEEC
T ss_conf 68------------998299999999979
|
| >d2zoda1 d.79.4.1 (A:3-154) Selenide, water dikinase SelD {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: Selenide, water dikinase SelD species: Aquifex aeolicus [TaxId: 63363]
Probab=99.68 E-value=2.2e-16 Score=118.94 Aligned_cols=130 Identities=18% Similarity=0.189 Sum_probs=94.8
Q ss_pred HHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 99998721299980464306863252687531111689987642335885079998111379988894788962346643
Q 000572 343 QIVKSTLQANPNNSVIGFKDNSSAIKGFPVKQLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETGAGGRI 422 (1414)
Q Consensus 343 ~~i~~~~~~~~~~~~~g~~Dnaavi~~~~~~~~~~~~~g~~a~~~~~~~~~~i~~kvEthn~ps~idP~~gA~tgvgg~i 422 (1414)
+.+.+.....++.++++++|||||++.. +..++++++. ..+-..+||..++.++..|+
T Consensus 22 ~~L~~~~~~~~~~v~~g~gDDaAvi~~~---------------------~~~lv~s~D~-~~~~v~~p~~~G~~av~~~l 79 (152)
T d2zoda1 22 EILKGFNIYTDESTLVSIGDDAGVYEHN---------------------GIIWVYTVDI-ITPVVNDPYLWGAISTANAL 79 (152)
T ss_dssp HHHHHSCCCCC---------CCCEEEET---------------------TEEEEEEEEE-ECCSSSCHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCC---------------------CCEEEEEECC-CCCCCCCHHHHHHHHHHHHH
T ss_conf 9997568888944022678741001468---------------------9679997135-45764598998899887337
Q ss_pred CCHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCC
Q ss_conf 22002479960477867887358888899999899988899998996999999999999997691990422422795311
Q 000572 423 RDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMR 502 (1414)
Q Consensus 423 rDi~amGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~Gi~d~~n~~GvPivgG~t~s~~~~ 502 (1414)
|||+|| ||+|++++.++.+++.. .+.++++++.+|+.+.|+++|++++||||..
T Consensus 80 SDIaAm--Ga~P~~~l~~l~lp~~~--------------------~~~~~l~~i~~Gi~~~~~~~g~~lvGGdt~~---- 133 (152)
T d2zoda1 80 SDVYAM--GGIPVNALAISCFNNCE--------------------LDIEIFREVIRGALDKLREAKTVLLGGHTID---- 133 (152)
T ss_dssp HHHHHT--TCEEEEEEEEEEECTTT--------------------CCHHHHHHHHHHHHHHHHHTTCEEEEEEEEE----
T ss_pred HHHHHC--CCCEEEEEEECCCCCCC--------------------CCHHHHHHHHHHHHHHHHHCCCEEEEEEECC----
T ss_conf 568764--99400344402367554--------------------5799999999999998745497488364067----
Q ss_pred CCCCCCCCCCCCEEEEEEEEEEECCC
Q ss_conf 58987433377448899998560766
Q 000572 503 LPSGQRREWLKPIMFSGGIGQIDHNH 528 (1414)
Q Consensus 503 ~~~g~~~~~~~Pl~~~~~vG~v~~~~ 528 (1414)
...|++.++++|.+++++
T Consensus 134 --------~~~~~i~~tv~G~v~~~k 151 (152)
T d2zoda1 134 --------DKEPKFGLSVAGICPEGK 151 (152)
T ss_dssp --------CSSCEEEEEEEEECGGGC
T ss_pred --------CCCCEEEEEEEEEECCCC
T ss_conf --------998689999999967995
|
| >d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: gamma-glutamyl hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=5.5e-16 Score=116.43 Aligned_cols=204 Identities=16% Similarity=0.104 Sum_probs=106.0
Q ss_pred CCCEEEEEECCCCC----------CHHHHHHHHHHCCCCEEEEECCCCCCC-CCCCCCCCEEEECCCCCCHHHHHCCCCH
Q ss_conf 99789999029976----------879999999984995299625666575-4691374899991997824332023121
Q 000572 1143 SKPKVAVIREEGSN----------GDREMSAAFYAAGFEPWDVTMSDLING-AISLDEFRGIVFVGGFSYADVLDSAKGW 1211 (1414)
Q Consensus 1143 ~~~kVaVl~~~G~n----------~~~~~~~Al~~aG~~~~~v~~~dl~~~-~~~l~~~dglvlpGG~s~~D~l~ag~~~ 1211 (1414)
+||-|+|+.-+-.. -..+..++++.+|+.|+.+..+..... ...++..|||+||||++..+....+.
T Consensus 2 ~kPiIGI~~~~~~~~~~~~~~~~yi~~sYvk~ie~aGa~vvpi~~~~~~~~~~~~l~~idGillpGG~~~~~~~~~~~-- 79 (288)
T d1l9xa_ 2 KKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRSDYAK-- 79 (288)
T ss_dssp CCCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHHSSEEEECCCCCCTTTCHHHH--
T ss_pred CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCC--
T ss_conf 879999967745676522142778889999999988998999879999799999874327769617897732235545--
Q ss_pred HHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEC-
Q ss_conf 6778510117999999880999839999025699876096479998874578999998726515987349856999983-
Q 000572 1212 SASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIE- 1290 (1414)
Q Consensus 1212 a~~~l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g~~~~~~~~~~~~p~l~~N~s~rfe~r~v~v~i~- 1290 (1414)
+.+. .+...+.+.......|+||||+|||+|+.. .. |.. ........+ ....++..
T Consensus 80 ~~r~----~~~~~l~~~~~~~~~PilGIC~G~Qll~~~--~g---G~~-------~~~~~~~~~-------~~~~~~~~~ 136 (288)
T d1l9xa_ 80 VAKI----FYNLSIQSFDDGDYFPVWGTCLGFEELSLL--IS---GEC-------LLTATDTVD-------VAMPLNFTG 136 (288)
T ss_dssp HHHH----HHHHHHHHHHTTCCCCEEEETHHHHHHHHH--HH---SSC-------CCEEEEEEE-------EEECCEECS
T ss_pred CCHH----HHHHHHHHHHHHCCCCEEEECHHHHHHHHH--HC---CEE-------ECCCCCCCC-------CCEEEEECC
T ss_conf 3067----999999999864799768971788999998--58---873-------035667678-------624677448
Q ss_pred -CCCCCCCCCCCCC-------EEEEEEEECCCEEEECCHHHH---HHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCE
Q ss_conf -5898223588896-------799998624651780790358---89731693689983699997666899989986761
Q 000572 1291 -DSPAIMLKGMEGS-------TLGVWAAHGEGRAYFPDDGVL---DRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGV 1359 (1414)
Q Consensus 1291 -~~~s~~l~g~~g~-------~l~~~~~Hgegr~~~~~~~~~---~~l~~~~~i~~~y~d~~g~~~~~yP~NPnGs~~~i 1359 (1414)
...+.+++.+... ...++..|+++- ..... ..+...-.+.++ +++|....|
T Consensus 137 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~H~~~v----~~~~~~~~~~l~~~~~v~a~--------------s~d~~~e~I 198 (288)
T d1l9xa_ 137 GQLHSRMFQNFPTELLLSLAVEPLTANFHKWSL----SVKNFTMNEKLKKFFNVLTT--------------NTDGKIEFI 198 (288)
T ss_dssp TTTTCSTTTTSCHHHHHHHHHSCCEEEEEEEEC----BHHHHHTCHHHHHHEEEEEE--------------EESSSCEEE
T ss_pred CCCCCEEEEECCCCHHHHCCCCCEEEEECCCEE----EECCCCHHHHCCCCEEEEEE--------------ECCCCEEEE
T ss_conf 876522674035515553367726999515489----82430022433786189999--------------789995789
Q ss_pred EEEECCCCCEEEECCCCCCCCCCCC-CCCCC
Q ss_conf 5998489859998567865665413-77899
Q 000572 1360 AAICSPDGRHLAMMPHPERCFLMWQ-YPWYP 1389 (1414)
Q Consensus 1360 agi~s~dGrvlg~m~HPEr~~~~~q-~~~~p 1389 (1414)
+++...+..++|+||||||+-+.|. +..+|
T Consensus 199 ~~ie~~~~pi~GvQfHPEk~~fE~~~~~~~~ 229 (288)
T d1l9xa_ 199 STMEGYKYPVYGVQWHPEKAPYEWKNLDGIS 229 (288)
T ss_dssp EEEEESSSCEEEESSCTTHHHHCCSSCTTCC
T ss_pred EEEECCCCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf 9997589969999838999972345677899
|
| >d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: GMP synthetase species: Escherichia coli [TaxId: 562]
Probab=99.65 E-value=6.7e-15 Score=109.41 Aligned_cols=186 Identities=19% Similarity=0.270 Sum_probs=109.9
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHCCHHH
Q ss_conf 99789999029976879999999984995299625666575469137489999199782433202312167785101179
Q 000572 1143 SKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1143 ~~~kVaVl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlpGG~s~~D~l~ag~~~a~~~l~~~~l~ 1222 (1414)
.+.||+||++ |...-+...+++++.|+++.+++.+. .........++++++.||........ . .
T Consensus 4 ~~~kI~IiD~-G~~~~~~I~r~lr~lg~~~~I~~~d~-~~~~~~~~~~~giils~gp~~~~~~~--~---------~--- 67 (205)
T d1gpma2 4 HKHRILILDF-GSQYTQLVARRVRELGVYCELWAWDV-TEAQIRDFNPSGIILSGGPESTTEEN--S---------P--- 67 (205)
T ss_dssp TSSEEEEEEC-SCTTHHHHHHHHHHTTCEEEEEESCC-CHHHHHHHCCSEEEECCCSSCTTSTT--C---------C---
T ss_pred CCCEEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCC-CHHHHHHCCCCEEEECCCCCCCCHHH--H---------H---
T ss_conf 6481999989-86499999999998798899987999-98997201898678569887541012--3---------4---
Q ss_pred HHHHHHHHCCCCEEEEEEHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCC
Q ss_conf 999998809998399990256998760-9647999887457899999872651598734985699998358982235888
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMALL-GWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGME 1301 (1414)
Q Consensus 1223 ~~i~~f~~r~~~~iLGIC~G~QlL~~l-glip~~~g~~~~~~~~~~~~p~l~~N~s~rfe~r~v~v~i~~~~s~~l~g~~ 1301 (1414)
..+...+ ..++|+||||+|||+|+.. | +. +.+.. ..+-.|..+.+.. .+.++.+..
T Consensus 68 ~~~~~~~-~~~~PiLGIClG~Qlla~~~G------g~-------------v~~~~--~~~~G~~~~~~~~-~~~~~~~~~ 124 (205)
T d1gpma2 68 RAPQYVF-EAGVPVFGVCYGMQTMAMQLG------GH-------------VEASN--EREFGYAQVEVVN-DSALVRGIE 124 (205)
T ss_dssp CCCGGGG-TSSSCEEEETHHHHHHHHHHT------CE-------------EECCS--SCEEEEEEEEECS-CCTTTTTCC
T ss_pred HHHHHHH-HCCCCEEEECCCHHHHHHHCC------CC-------------CCCCC--CCCCCCCEECCCC-CCCCCCCCC
T ss_conf 6789997-079988996333242221168------72-------------01244--1246741001345-552225643
Q ss_pred -------CCEEEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECC
Q ss_conf -------9679999862465178079035889731693689983699997666899989986761599848985999856
Q 000572 1302 -------GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMP 1374 (1414)
Q Consensus 1302 -------g~~l~~~~~Hgegr~~~~~~~~~~~l~~~~~i~~~y~d~~g~~~~~yP~NPnGs~~~iagi~s~dGrvlg~m~ 1374 (1414)
...+.++..|.+-....+ + ..+.....+ +. .++++-..+.+++|+||
T Consensus 125 ~~~~~~~~~~~~~~~~h~~~~~~~~-~---------~~~~~~~~~--------------~~--~~~~~~~~~~ni~gvQF 178 (205)
T d1gpma2 125 DALTADGKPLLDVWMSHGDKVTAIP-S---------DFITVASTE--------------SC--PFAIMANEEKRFYGVQF 178 (205)
T ss_dssp SEECTTSCEEEEEEEEECSEEEECC-T---------TCEEEEECS--------------SC--SCSEEEETTTTEEEESB
T ss_pred CCCCCCCCCCEEEECCCCCCCCCCC-C---------CCEEEECCC--------------CC--CEEEEEECCCCEEEEEE
T ss_conf 3211577431000000011122354-4---------404430037--------------98--53778827998999982
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 7865665413778999877889999936999999998
Q 000572 1375 HPERCFLMWQYPWYPKNWNVDKKGPSPWLKMFQNARE 1411 (1414)
Q Consensus 1375 HPEr~~~~~q~~~~p~~~~~~~~~~spw~~~F~n~~~ 1411 (1414)
|||.+.- --+.+||+|+.+
T Consensus 179 HPE~s~s------------------~~G~~il~nFl~ 197 (205)
T d1gpma2 179 HPEVTHT------------------RQGMRMLERFVR 197 (205)
T ss_dssp CTTSTTS------------------TTHHHHHHHHHH
T ss_pred ECCCCCC------------------CCHHHHHHHHHH
T ss_conf 0403799------------------559999999999
|
| >d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: Anthranilate synthase GAT subunit, TrpG species: Serratia marcescens [TaxId: 615]
Probab=99.57 E-value=6.5e-13 Score=96.60 Aligned_cols=185 Identities=15% Similarity=0.094 Sum_probs=110.4
Q ss_pred EEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC-CCCC--CCCCEEEECCCCCCHHHHHCCCCHHHHHHHCCHHH
Q ss_conf 89999029976879999999984995299625666575-4691--37489999199782433202312167785101179
Q 000572 1146 KVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLING-AISL--DEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLL 1222 (1414)
Q Consensus 1146 kVaVl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~-~~~l--~~~dglvlpGG~s~~D~l~ag~~~a~~~l~~~~l~ 1222 (1414)
.|.|+..+.+.. +-.+..|++.|+++.+++....... ...+ .++++|++.||....+... ..
T Consensus 2 niliiD~~DSFt-~ni~~~l~~lG~~~~v~~~~~~~~~~~~~l~~~~~~~iils~Gpg~~~~~~--------------~~ 66 (192)
T d1i7qb_ 2 DILLLDNVDSFT-YNLVDQLRASGHQVVIYRNQIGAEVIIERLQHMEQPVLMLSPGPGTPSEAG--------------CM 66 (192)
T ss_dssp EEEEEECSCSSH-HHHHHHHHHTTCEEEEEETTSCHHHHHHHHHHCSSEEEEECCCSSCGGGST--------------TH
T ss_pred CEEEEECCCCHH-HHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCC--------------CC
T ss_conf 299997988179-999999997799189995998533119999830998687257552222222--------------31
Q ss_pred HHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCCC
Q ss_conf 99999880999839999025699876096479998874578999998726515987349856999983589822358889
Q 000572 1223 NQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEG 1302 (1414)
Q Consensus 1223 ~~i~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g~~~~~~~~~~~~p~l~~N~s~rfe~r~v~v~i~~~~s~~l~g~~g 1302 (1414)
..+.+.+. .+.|+||||+|+|+|+.. .. +. +.+... -+-.|..... ..++.++.++.
T Consensus 67 ~~i~~~l~-~~iPiLGIClG~Q~la~~--~G---g~-------------v~~~~~--~~~g~~~~~~-~~~~~l~~~~~- 123 (192)
T d1i7qb_ 67 PELLQRLR-GQLPIIGICLGHQAIVEA--YG---GQ-------------VGQAGE--ILHGKASAIA-HDGEGMFAGMA- 123 (192)
T ss_dssp HHHHHHHB-TTBCEEEETHHHHHHHHH--TT---CE-------------EEEEEE--EEEEEEEEEE-ECCCGGGTTCC-
T ss_pred HHHHHHHH-CCCCEEEEEHHHHHHHHH--CC---CE-------------EEECCC--CCCCCEEEEE-ECCCCCEEECC-
T ss_conf 45677663-476487521888999998--89---96-------------997784--5334307886-35888434315-
Q ss_pred CEEEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCC
Q ss_conf 67999986246517807903588973169368998369999766689998998676159984898599985678656654
Q 000572 1303 STLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLM 1382 (1414)
Q Consensus 1303 ~~l~~~~~Hgegr~~~~~~~~~~~l~~~~~i~~~y~d~~g~~~~~yP~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~ 1382 (1414)
....++..|++.... .+.. -.+...+ + ..|.|+...+.+++|+||||| +...
T Consensus 124 ~~~~~~~~h~~~~~~--~~~~-------~~~~a~~----------------~--~~i~ai~~~~~~i~GvQFHPE-s~~t 175 (192)
T d1i7qb_ 124 NPLPVARYHSLVGSN--IPAD-------LTVNARF----------------G--EMVMAVRDDRRRVCGFQFHPE-SILT 175 (192)
T ss_dssp SSEEEEEEEEEEEES--CCTT-------SEEEEEE----------------T--TEEEEEEETTTTEEEESSCTT-STTS
T ss_pred CCCEEEEECCCCCCC--CCCE-------EEEECCC----------------C--CEEEEEEECCCCEEEEEECCC-CCCC
T ss_conf 553487621324444--3210-------2440489----------------9--935799979999999980797-6899
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 1377899987788999993699999999861
Q 000572 1383 WQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1383 ~q~~~~p~~~~~~~~~~spw~~~F~n~~~~~ 1413 (1414)
.-+.+||+|+..|.
T Consensus 176 -----------------~~G~~il~nFl~~~ 189 (192)
T d1i7qb_ 176 -----------------THGARLLEQTLAWA 189 (192)
T ss_dssp -----------------TTHHHHHHHHHHHH
T ss_pred -----------------CCHHHHHHHHHHHH
T ss_conf -----------------88699999999997
|
| >d3c9ua2 d.139.1.1 (A:138-300) Thiamine monophosphate kinase (ThiL) C-terminal domain {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: Thiamine monophosphate kinase (ThiL) C-terminal domain species: Aquifex aeolicus [TaxId: 63363]
Probab=99.56 E-value=4.7e-15 Score=110.39 Aligned_cols=137 Identities=12% Similarity=0.078 Sum_probs=93.7
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH------HHHHHHCCCCCE
Q ss_conf 22489999999999915887666427889986618998866665335799999999999999------999832259903
Q 000572 529 ISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVR------ACIEMGETNPII 602 (1414)
Q Consensus 529 i~~~~a~~GD~Ivv~G~~tgr~GlgGa~~ss~~~~~~~~~~~~~~Vq~~dp~~ek~l~~~i~------~~~el~~~~~i~ 602 (1414)
+.|++|+|||.|+++| .+|.+++++..+..+.. ...+.....++++++ ....+ .+.++
T Consensus 3 l~RsgAk~GD~I~vTg----~lG~s~~Gl~~l~~~~~----------~~~~~~~~~i~~~~~P~~~~~~~~~l--~~~~~ 66 (163)
T d3c9ua2 3 VGRDGARLGDSVFVSG----TLGDSRAGLELLLMEKE----------EYEPFELALIQRHLRPTARIDYVKHI--QKYAN 66 (163)
T ss_dssp CCSSCCCTTCEEEEES----CSSHHHHHHHHHHTTCS----------CCCHHHHHHHHHHHSCCCCGGGHHHH--HHHCS
T ss_pred CCCCCCCCCCEEEEEC----CHHHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHCCCCHHHCHHH--HHHHH
T ss_conf 7689999999999908----17589999999974112----------01207888999998407412101013--45433
Q ss_pred EEECCCCCCHHHHHHHHHC--CCEEEEEECCCCCCCC--------CCCHHHHHCCCCCC-EEEEEECCCCHHHHHHHHHH
Q ss_conf 9985997838888998746--9819999078777878--------82289996043452-16999967897899999977
Q 000572 603 SIHDQGAGGNCNVVKEIIY--PKGAEIDIRAIIVGDH--------TLSVLEIWGAEYQE-QDAVLVKPESRDLLQSICER 671 (1414)
Q Consensus 603 ai~DigaGGL~~al~Ela~--~~G~~Idl~~iP~~~~--------~l~p~ei~~sEsqe-r~ll~V~pe~~~~l~~i~~~ 671 (1414)
+|+|+| +||+.+|.||++ ++|++|+.++||+... +.+|+++.++...+ .+++|+++++.+.+
T Consensus 67 a~~DiS-DGL~~dL~~ia~aS~vg~~I~~~~iPi~~~~~~~~~~~~~~~l~~~l~gGEDyellft~~~~~~~~~------ 139 (163)
T d3c9ua2 67 ASMDIS-DGLVADANHLAQRSGVKIEILSEKLPLSNELKMYCEKYGKNPIEYALFGGEDYQLLFTHPKERWNPF------ 139 (163)
T ss_dssp EEEEES-SCHHHHHHHHHHHHTCEEEECGGGSCCCHHHHHHHHHTTCCHHHHHHHCCCCCEEEEEECGGGCCTT------
T ss_pred HCCCCC-CCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHCC------
T ss_conf 032045-3466667899987077334428872426789999998545467765303776369998488897466------
Q ss_pred CCCCEEEEEEEECCCEEEE
Q ss_conf 3997279999994883999
Q 000572 672 ERVSMAVIGTISGEGRVVL 690 (1414)
Q Consensus 672 ~~~~~~vIG~vt~~~~l~i 690 (1414)
+.+++||+|+++.++.+
T Consensus 140 --~~~~~IG~v~~g~gv~l 156 (163)
T d3c9ua2 140 --LDMTEIGRVEEGEGVFV 156 (163)
T ss_dssp --SCEEEEEEEESSSSEEE
T ss_pred --CCCEEEEEEECCCCEEE
T ss_conf --99518989977999898
|
| >d2z1ea1 d.79.4.1 (A:43-155) Hydrogenase expression/formation protein HypE {Thermococcus kodakaraensis [TaxId: 311400]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: Hydrogenase expression/formation protein HypE species: Thermococcus kodakaraensis [TaxId: 311400]
Probab=99.55 E-value=1.4e-14 Score=107.33 Aligned_cols=108 Identities=16% Similarity=0.289 Sum_probs=80.1
Q ss_pred CCCCCCCEEEEEEECCCCC-CCCCCCHHHHHHCCCCCCCCHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2335885079998111379-988894788962346643220024799604778678873588888999998999888999
Q 000572 386 LSESSQDLDVLFTAETHNF-PCAVAPYPGAETGAGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPS 464 (1414)
Q Consensus 386 ~~~~~~~~~i~~kvEthn~-ps~idP~~gA~tgvgg~irDi~amGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~ 464 (1414)
++..++++ ++++++++.. |...+||..|++++..++||++|| ||+|++++++|++++ .
T Consensus 4 vi~~~~~~-lv~stD~~~~~~~~~~~~~iG~~av~~~~sDi~am--Ga~P~~~~~~l~lp~-----~------------- 62 (113)
T d2z1ea1 4 TIPFGDKH-IVFTIDGHTVKPLFFPGGDIGRLAVSGTVNDLAVM--GAEPIALANSMIIGE-----G------------- 62 (113)
T ss_dssp EEEETTEE-EEEEEEEECCSSSEETTEEHHHHHHHHHHHHHHTT--TCEEEEEEEEEEEET-----T-------------
T ss_pred EEEECCCE-EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--CCHHHHHHHHECCCC-----C-------------
T ss_conf 99929987-99998657778755886887799999989899883--671888734131688-----7-------------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 98996999999999999997691990422422795311589874333774488999985607
Q 000572 465 NLASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLPSGQRREWLKPIMFSGGIGQIDH 526 (1414)
Q Consensus 465 ~~~~~~~i~~~~~~Gi~d~~n~~GvPivgG~t~s~~~~~~~g~~~~~~~Pl~~~~~vG~v~~ 526 (1414)
...+.++++++|+.+.|+++|++++||||.... ...++++.++++|.+++
T Consensus 63 ---~~~~~l~~i~~gi~~~~~~~~i~ivGGdT~~~~---------~~~~~~is~t~iG~~~k 112 (113)
T d2z1ea1 63 ---LDMEVLKRVLKSMDETAREVPVPIVTGDTKVVE---------DKIEMFVITAGIGIAEH 112 (113)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEES---------SSCCEEEEEEEEEEESS
T ss_pred ---CCHHHHHHHHHHHHHHHHHCCCEEECCCCEEEC---------CCCCEEEEEEEEEEECC
T ss_conf ---608999999999999997749578567535706---------99762999999998669
|
| >d2zoda2 d.139.1.1 (A:155-336) Selenide, water dikinase SelD {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: Selenide, water dikinase SelD species: Aquifex aeolicus [TaxId: 63363]
Probab=99.54 E-value=4.2e-14 Score=104.29 Aligned_cols=149 Identities=13% Similarity=0.096 Sum_probs=97.7
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
Q ss_conf 22489999999999915887666427889986618998866665335799999999999999999832259903998599
Q 000572 529 ISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDADLDFNAVQRGDAEMAQKLYRVVRACIEMGETNPIISIHDQG 608 (1414)
Q Consensus 529 i~~~~a~~GD~Ivv~G~~tgr~GlgGa~~ss~~~~~~~~~~~~~~Vq~~dp~~ek~l~~~i~~~~el~~~~~i~ai~Dig 608 (1414)
+.|++|+|||.|+|+|. +|.+.+. .....+..+.+ .+ ....+......+..........+++++|++
T Consensus 1 l~rsGAkpGD~i~vTg~----lG~~~~~-~a~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t 67 (182)
T d2zoda2 1 ITQSGAQVGQLLILTKP----IGTGILI-KGLKEGILKEE----DI----NEAIENMLALNDKARNLMLSLDATACTDVT 67 (182)
T ss_dssp CCSSCCCTTCEEEECSC----BCHHHHH-HHHHTTSSCGG----GG----HHHHHHHHSCSHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCCCCEEEECCC----HHHHHHH-HHHHHCCCCHH----HH----HHHHHHHHHCCCHHHHHHHHCCCHHHHCCH
T ss_conf 97578999999998951----7999999-99983789989----99----999987530110257898842413541505
Q ss_pred CCCHHHHHHHHHC--CCEEEEEECCCCCCCC---------------------------CCCHHHHHCC---CCCCEEEEE
Q ss_conf 7838888998746--9819999078777878---------------------------8228999604---345216999
Q 000572 609 AGGNCNVVKEIIY--PKGAEIDIRAIIVGDH---------------------------TLSVLEIWGA---EYQEQDAVL 656 (1414)
Q Consensus 609 aGGL~~al~Ela~--~~G~~Idl~~iP~~~~---------------------------~l~p~ei~~s---Esqer~ll~ 656 (1414)
.+|+..++.||+. +.++.++++++|+... ..+++.+++. ++...++++
T Consensus 68 ~~gl~~~l~~~~~~s~~~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~l~~~~~~~t~g~LL~t 147 (182)
T d2zoda2 68 GFGLLGHAWNICKNSNIGARIFFEKVPYYQLSENLVKKKIYPKGAIENLNFVKNYLKSNLDNWKLILLSDPVTSGGLLFT 147 (182)
T ss_dssp TTHHHHHHHHHHHHHTCEEEECGGGSCBCHHHHHHHHTTCCCHHHHHHHHHHTTTEECCCCHHHHHHHHCCCSSCCEEEE
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEE
T ss_conf 56665346654430132002323201221277888870451033454168888752027889999741275557238999
Q ss_pred ECCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEE
Q ss_conf 9678978999999773997279999994883999
Q 000572 657 VKPESRDLLQSICERERVSMAVIGTISGEGRVVL 690 (1414)
Q Consensus 657 V~pe~~~~l~~i~~~~~~~~~vIG~vt~~~~l~i 690 (1414)
|+|++.+++.+.+++.++++++||+||+++.+.+
T Consensus 148 vp~e~~~~~~~~~~~~g~~~~~IG~v~~~~~~~v 181 (182)
T d2zoda2 148 INKEKLEKIDETAKELEVNYWIIGETIAENVLEV 181 (182)
T ss_dssp ECGGGGGTHHHHHHHHTCCCEEEEEEESSSSEEE
T ss_pred ECHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEE
T ss_conf 6899999999999976999489999984899657
|
| >d1vk3a1 d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 species: Thermotoga maritima [TaxId: 2336]
Probab=99.54 E-value=2.3e-15 Score=112.36 Aligned_cols=116 Identities=11% Similarity=0.029 Sum_probs=97.3
Q ss_pred CCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 97683899984598813749998547998888999999999999851011147654101112332233447887179999
Q 000572 789 ITLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMY 868 (1414)
Q Consensus 789 ~p~~DaAVi~~~~~~~~gia~s~g~~p~~~~~dP~~ga~~AV~eai~niaa~Ga~pl~~v~~s~n~~~p~~~~~~~~~l~ 868 (1414)
.+.+||+|+...+ ..+++++++.|+..+.+|||.||..+|++++||++++|+.|+..+++ ++|.|+ +.
T Consensus 48 ~~~dNAgVi~~~~--~~~i~~k~ETHNhPtai~Pf~GAaTgvgG~iRD~~~~Ga~p~a~~~~-L~~~~i---------~~ 115 (165)
T d1vk3a1 48 GFEGNAGVVNLDD--YYSVAFKIESHNHPSAIEPYNGAATGVGGIIRDVLAMGARPTAIFDS-LHMSRI---------ID 115 (165)
T ss_dssp TTSSSTTEEESSS--SEEEEEEEEECHHHHHHCHHHHHHHHHHHHHHHHHHTTCEEEEEEEE-EEESSC---------CH
T ss_pred CCCCCCCEEECCC--CCCEEEEEECCCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCC-CCHHHH---------HH
T ss_conf 1367740651156--64056788327834203587753411345542542334556013477-311223---------22
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCCCCCC
Q ss_conf 99999999999929810234432223222699300008738999999818999313
Q 000572 869 DAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPDITKTV 924 (1414)
Q Consensus 869 ~a~~gl~dac~~lgipivgGkdSls~~~~~~~~~i~~ppTlvisa~G~v~d~~~~i 924 (1414)
++++|++++|.++|+|.++|++++++++.. .|.+.+.++|.++. ++++
T Consensus 116 ~~v~G~a~ygN~~G~P~v~G~v~~~~~~~~-------~Pi~~~g~vG~i~~-d~iv 163 (165)
T d1vk3a1 116 GIIEGIADYGNSIGVPTVGGELRISSLYAH-------NPLVNVLAAGVVRN-DMLV 163 (165)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEEECGGGTT-------CCEEEEEEEEEEET-TSCC
T ss_pred HCCHHHHHHHHHHCCCCCCEEEEEECCCCC-------CCEEEEEEEEECCC-CCCC
T ss_conf 202239999874098733315999164499-------97589705873376-5305
|
| >d2zoda1 d.79.4.1 (A:3-154) Selenide, water dikinase SelD {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: Selenide, water dikinase SelD species: Aquifex aeolicus [TaxId: 63363]
Probab=99.52 E-value=4.2e-14 Score=104.25 Aligned_cols=111 Identities=12% Similarity=0.061 Sum_probs=85.7
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 76838999845988137499985479988889999999999998510111476541011123322334478871799999
Q 000572 790 TLADVAVIAQTYTDLTGGACAIGEQPIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYD 869 (1414)
Q Consensus 790 p~~DaAVi~~~~~~~~gia~s~g~~p~~~~~dP~~ga~~AV~eai~niaa~Ga~pl~~v~~s~n~~~p~~~~~~~~~l~~ 869 (1414)
+++||||++.+. ..+++|+|....... |||..|+.||+.+++||+|||++|...+ +++. .|.+. -+.+++.+
T Consensus 39 ~gDDaAvi~~~~---~~lv~s~D~~~~~v~-~p~~~G~~av~~~lSDIaAmGa~P~~~l-~~l~--lp~~~-~~~~~l~~ 110 (152)
T d2zoda1 39 IGDDAGVYEHNG---IIWVYTVDIITPVVN-DPYLWGAISTANALSDVYAMGGIPVNAL-AISC--FNNCE-LDIEIFRE 110 (152)
T ss_dssp ---CCCEEEETT---EEEEEEEEEECCSSS-CHHHHHHHHHHHHHHHHHHTTCEEEEEE-EEEE--ECTTT-CCHHHHHH
T ss_pred CCCCCCCCCCCC---CEEEEEECCCCCCCC-CHHHHHHHHHHHHHHHHHHCCCCEEEEE-EECC--CCCCC-CCHHHHHH
T ss_conf 787410014689---679997135457645-9899889988733756876499400344-4023--67554-57999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCC
Q ss_conf 99999999999298102344322232226993000087389999998189
Q 000572 870 AATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPD 919 (1414)
Q Consensus 870 a~~gl~dac~~lgipivgGkdSls~~~~~~~~~i~~ppTlvisa~G~v~d 919 (1414)
.++|+.++|+++|++++|||++.+ . -+++.+|++|.++.
T Consensus 111 i~~Gi~~~~~~~g~~lvGGdt~~~-------~----~~~i~~tv~G~v~~ 149 (152)
T d2zoda1 111 VIRGALDKLREAKTVLLGGHTIDD-------K----EPKFGLSVAGICPE 149 (152)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEC-------S----SCEEEEEEEEECGG
T ss_pred HHHHHHHHHHHCCCEEEEEEECCC-------C----CCEEEEEEEEEECC
T ss_conf 999999987454974883640679-------9----86899999999679
|
| >d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: Carbamoyl phosphate synthetase, small subunit C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.52 E-value=4.4e-13 Score=97.69 Aligned_cols=186 Identities=16% Similarity=0.127 Sum_probs=107.1
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHCCHH
Q ss_conf 89978999902997687999999998499529962566657546913748999919978243320231216778510117
Q 000572 1142 TSKPKVAVIREEGSNGDREMSAAFYAAGFEPWDVTMSDLINGAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPL 1221 (1414)
Q Consensus 1142 ~~~~kVaVl~~~G~n~~~~~~~Al~~aG~~~~~v~~~dl~~~~~~l~~~dglvlpGG~s~~D~l~ag~~~a~~~l~~~~l 1221 (1414)
..+.||+|+++ |+ -+..++.+++.|+.+++++.+.-. .......+|||+|.||++.+... ...
T Consensus 37 ~~~~~i~~~D~-G~--k~~ilr~l~~~~~~~~v~p~~~~~-~~i~~~~pdgivlS~GPg~P~~~-------------~~~ 99 (228)
T d1a9xb2 37 ELPFHVVAYDF-GA--KRNILRMLVDRGCRLTIVPAQTSA-EDVLKMNPDGIFLSNGPGDPAPC-------------DYA 99 (228)
T ss_dssp GCCEEEEEEES-SC--CHHHHHHHHHTTEEEEEEETTCCH-HHHHTTCCSEEEECCCSBCSTTC-------------HHH
T ss_pred CCCCEEEEEEC-CC--CHHHHHHHHHCCCEEEECCCCCCH-HHHHHCCCCEEEEECCCCCCCCC-------------HHH
T ss_conf 87616999957-87--277676787559657875888999-99984499999982887765321-------------127
Q ss_pred HHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCC
Q ss_conf 99999988099983999902569987609647999887457899999872651598734985699998358982235888
Q 000572 1222 LNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGME 1301 (1414)
Q Consensus 1222 ~~~i~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g~~~~~~~~~~~~p~l~~N~s~rfe~r~v~v~i~~~~s~~l~g~~ 1301 (1414)
.+.++.++ +.+.||||||+|+|+|+.. +. |. +.+...+.+ .............
T Consensus 100 ~~~~~~~~-~~~iPILGIClG~Qlia~~--~G---g~-------------v~k~~~~~~--G~~~~~~~~~~~~------ 152 (228)
T d1a9xb2 100 ITAIQKFL-ETDIPVFGICLGHQLLALA--SG---AK-------------TVKMKFGHH--GGNHPVKDVEKNV------ 152 (228)
T ss_dssp HHHHHHHT-TSCCCEEEETHHHHHHHHH--TT---CC-------------EEEEEEEEE--EEEEEEEETTTTE------
T ss_pred HHHHHHHH-HCCCCEEEEECCHHHHHHH--CC---CC-------------EEECCCCCC--CCCCCCCCCCCCE------
T ss_conf 89999998-1799889997675899987--69---96-------------153245556--6532122334412------
Q ss_pred CCEEEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC
Q ss_conf 96799998624651780790358897316936899836999976668999899867615998489859998567865665
Q 000572 1302 GSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFL 1381 (1414)
Q Consensus 1302 g~~l~~~~~Hgegr~~~~~~~~~~~l~~~~~i~~~y~d~~g~~~~~yP~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~ 1381 (1414)
.+..+-.|+. ..... . +.....+... +.|.. .|+|+...+.+++|.|||||-+.-
T Consensus 153 --~~~~~~~~~~---~~~~~-~---~~~~~~v~~~--------------s~~d~--~i~ai~h~~~~i~gVQFHPE~~~t 207 (228)
T d1a9xb2 153 --VMITAQNHGF---AVDEA-T---LPANLRVTHK--------------SLFDG--TLQGIHRTDKPAFSFQGNPEASPG 207 (228)
T ss_dssp --EEEEEEEEEE---EECST-T---CCTTEEEEEE--------------ETTTC--CEEEEEESSSSEEEESSCTTCSSS
T ss_pred --EEEECCCCCC---EECCC-C---CCCCEEEEEE--------------ECCCC--CEEEEEECCCCEEEEECCCCCCCC
T ss_conf --3441146431---11036-3---0243278987--------------36999--689999899999998079987898
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 41377899987788999993699999999861
Q 000572 1382 MWQYPWYPKNWNVDKKGPSPWLKMFQNAREWC 1413 (1414)
Q Consensus 1382 ~~q~~~~p~~~~~~~~~~spw~~~F~n~~~~~ 1413 (1414)
| -.+..||+|+...|
T Consensus 208 -------~----------~dg~~l~~nFl~~i 222 (228)
T d1a9xb2 208 -------P----------HDAAPLFDHFIELI 222 (228)
T ss_dssp -------C----------STTTHHHHHHHHHH
T ss_pred -------C----------CCHHHHHHHHHHHH
T ss_conf -------5----------35799999999999
|
| >d3c9ua1 d.79.4.1 (A:1-137) Thiamine monophosphate kinase (ThiL) N-terminal domain {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: Thiamine monophosphate kinase (ThiL) N-terminal domain species: Aquifex aeolicus [TaxId: 63363]
Probab=99.47 E-value=4e-13 Score=97.93 Aligned_cols=110 Identities=12% Similarity=-0.039 Sum_probs=85.2
Q ss_pred CCCCEEEEEECCCCCEEEEEEECCC----CCCCCCCHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 7683899984598813749998547----998888999999999999851011147654101112332233447887179
Q 000572 790 TLADVAVIAQTYTDLTGGACAIGEQ----PIKGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGA 865 (1414)
Q Consensus 790 p~~DaAVi~~~~~~~~gia~s~g~~----p~~~~~dP~~ga~~AV~eai~niaa~Ga~pl~~v~~s~n~~~p~~~~~~~~ 865 (1414)
.++||||+.... ..+++++|.. ......+||..|+.+++.+++||+||||+|.. +.+ ++.+|++. +..
T Consensus 24 iGDDaavi~~~~---~~lv~stD~~~~~vhf~~~~~~~~iG~~a~~~~~SDI~amGa~P~~-~~~--sl~lp~~~--~~~ 95 (137)
T d3c9ua1 24 IGDDTAPVEYCS---KKLLLTTDVLNEGVHFLRSYIPEAVGWKAISVNVSDVIANGGLPKW-ALI--SLNLPEDL--EVS 95 (137)
T ss_dssp TTSSSEEEEETT---EEEEEEEEEEEBTTTBCTTSCHHHHHHHHHHHHHHHHHHTTCEEEE-EEE--EEEECTTS--BHH
T ss_pred CCCCEEEEECCC---CCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCE-EEE--EEECCCCC--CHH
T ss_conf 987889997299---7489996761232442124668899999865003226652883414-576--65057676--366
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECC
Q ss_conf 99999999999999929810234432223222699300008738999999818
Q 000572 866 AMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCP 918 (1414)
Q Consensus 866 ~l~~a~~gl~dac~~lgipivgGkdSls~~~~~~~~~i~~ppTlvisa~G~v~ 918 (1414)
++.+.++|+.++|+++|++++||+++-+ + .+++.+|++|.++
T Consensus 96 ~~~~~~~Gi~~~~~~~~~~liGGdt~~~-------~----~l~is~t~~G~~e 137 (137)
T d3c9ua1 96 YVERFYIGVKRACEFYKCEVVGGNISKS-------E----KIGISVFLVGETE 137 (137)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEEEEEC-------S----SCEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHEEECEEEECCCCCCC-------C----CEEEEEEEEEEEC
T ss_conf 7688874353200050709981123689-------9----8299999999979
|
| >d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: CTP synthase PyrG, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.46 E-value=1e-11 Score=88.84 Aligned_cols=199 Identities=17% Similarity=0.179 Sum_probs=112.7
Q ss_pred CEEEEEECCCCCCH--HHHHHHHHHCCC----CEEEEECC--CCC-CCCCCCCCCCEEEECCCCCCHHHHHCCCCHHHHH
Q ss_conf 78999902997687--999999998499----52996256--665-7546913748999919978243320231216778
Q 000572 1145 PKVAVIREEGSNGD--REMSAAFYAAGF----EPWDVTMS--DLI-NGAISLDEFRGIVFVGGFSYADVLDSAKGWSASI 1215 (1414)
Q Consensus 1145 ~kVaVl~~~G~n~~--~~~~~Al~~aG~----~~~~v~~~--dl~-~~~~~l~~~dglvlpGG~s~~D~l~ag~~~a~~~ 1215 (1414)
.+|+++--|-...+ .++..||+.||. .+.+.++. ++. .....|.++|||++||||.+...
T Consensus 4 v~Ia~vGKY~~l~DaY~Sv~eaL~ha~~~~~~~v~i~wi~s~~~e~~~~~~L~~~dGIlvPGGFG~RG~----------- 72 (258)
T d1s1ma1 4 VTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGV----------- 72 (258)
T ss_dssp EEEEEEESSCSSGGGGHHHHHHHHHHHHHHTEEEEEEEEEHHHHHHHCTTTTTTCSEEEECCCCSSTTH-----------
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCH-----------
T ss_conf 699999676798525985999999757860972899997400155556321123462885135676778-----------
Q ss_pred HHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHH------CCCCCCCCCCCCCCCCCCCCCCE--EE--------------
Q ss_conf 510117999999880999839999025699876------09647999887457899999872--65--------------
Q 000572 1216 RFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMAL------LGWIPGPQVGGVHGAGGDPSQPR--FV-------------- 1273 (1414)
Q Consensus 1216 l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~------lglip~~~g~~~~~~~~~~~~p~--l~-------------- 1273 (1414)
++...+++-.. ..+.|.||||+|||+++- +|+-.... + ........|- +.
T Consensus 73 ---eGki~ai~yAR-en~iPfLGIClGmQ~avIE~ARnvlg~~~A~S-~---Ef~p~t~~pvi~~~~~~~~~~~~~~~~~ 144 (258)
T d1s1ma1 73 ---EGMITTARFAR-ENNIPYLGICLGMQVALIDYARHVANMENANS-T---EFVPDCKYPVVALITEWRDENGNVEVRS 144 (258)
T ss_dssp ---HHHHHHHHHHH-HTTCCEEEETHHHHHHHHHHHHHHHCCTTCEE-T---TTCSSCSCEEEECTTTCCCTTSCCC---
T ss_pred ---HHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC-C---CCCCCCCCCEEEECCCCCCCCCCEEEEE
T ss_conf ---89999999999-74861788888899999999998579988867-7---8789999988994443325678546740
Q ss_pred --ECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
Q ss_conf --159873498569999835898223588896799998624651780790358897316936899836999976668999
Q 000572 1274 --HNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFN 1351 (1414)
Q Consensus 1274 --~N~s~rfe~r~v~v~i~~~~s~~l~g~~g~~l~~~~~Hgegr~~~~~~~~~~~l~~~~~i~~~y~d~~g~~~~~yP~N 1351 (1414)
.+..+...-.--.+++ ...|...+-+....+. -.|-+ ||.+ .+.....|++.|++..-+ +
T Consensus 145 ~~~~~GgTmrlG~~~~~l-~~~s~~~~~Y~~~~i~--ERHRH-RYev-N~~y~~~le~~gl~~sG~-------------s 206 (258)
T d1s1ma1 145 EKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV--ERHRH-RYEV-NNMLLKQIEDAGLRVAGR-------------S 206 (258)
T ss_dssp -------CCEEEEEEEEE-CTTCHHHHHTTSSEEE--EEEEE-CCEE-CHHHHHHHHHTTCEEEEE-------------C
T ss_pred CCCCCCCCCCCCCCCHHH-HHHHHHHHHCCCCEEH--HHHHC-CHHH-HHHHHHHHHCCCCEEEEE-------------C
T ss_conf 345765421476461120-2678999843754232--55530-1555-556542221378353205-------------5
Q ss_pred CCCCCCCEEEEECCCCC-EEEECCCCCCCCCC
Q ss_conf 89986761599848985-99985678656654
Q 000572 1352 VNGSPLGVAAICSPDGR-HLAMMPHPERCFLM 1382 (1414)
Q Consensus 1352 PnGs~~~iagi~s~dGr-vlg~m~HPEr~~~~ 1382 (1414)
|+|. -+..|--++-. .+|+|||||...++
T Consensus 207 ~dg~--~vEiiEl~~HPffvg~QfHPEf~Srp 236 (258)
T d1s1ma1 207 GDDQ--LVEIIEVPNHPWFVACQFHPEFTSTP 236 (258)
T ss_dssp SSSC--CEEEEECTTSSSEEEESSCGGGTCCT
T ss_pred CCCC--EEEEEEECCCCEEEEECCCCCCCCCC
T ss_conf 9998--18999928997199965775445899
|
| >d2z1ea1 d.79.4.1 (A:43-155) Hydrogenase expression/formation protein HypE {Thermococcus kodakaraensis [TaxId: 311400]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: Hydrogenase expression/formation protein HypE species: Thermococcus kodakaraensis [TaxId: 311400]
Probab=99.40 E-value=4e-13 Score=97.97 Aligned_cols=111 Identities=14% Similarity=0.114 Sum_probs=84.0
Q ss_pred CEEEEEECCCCCEEEEEEECCCCC-CCCCCHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 389998459881374999854799-8888999999999999851011147654101112332233447887179999999
Q 000572 793 DVAVIAQTYTDLTGGACAIGEQPI-KGLLNPKAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEGAAMYDAA 871 (1414)
Q Consensus 793 DaAVi~~~~~~~~gia~s~g~~p~-~~~~dP~~ga~~AV~eai~niaa~Ga~pl~~v~~s~n~~~p~~~~~~~~~l~~a~ 871 (1414)
||||++++. ..+++++|.... ....+||..|+.+|+.+++||++||++|+. +.++ +..|++. +.+++.+.+
T Consensus 1 DaAvi~~~~---~~lv~stD~~~~~~~~~~~~~iG~~av~~~~sDi~amGa~P~~-~~~~--l~lp~~~--~~~~l~~i~ 72 (113)
T d2z1ea1 1 DGATIPFGD---KHIVFTIDGHTVKPLFFPGGDIGRLAVSGTVNDLAVMGAEPIA-LANS--MIIGEGL--DMEVLKRVL 72 (113)
T ss_dssp SCEEEEETT---EEEEEEEEEECCSSSEETTEEHHHHHHHHHHHHHHTTTCEEEE-EEEE--EEEETTC--CHHHHHHHH
T ss_pred CEEEEEECC---CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH-HHHH--ECCCCCC--CHHHHHHHH
T ss_conf 979999299---8799998657778755886887799999989899883671888-7341--3168876--089999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCC
Q ss_conf 999999999298102344322232226993000087389999998189
Q 000572 872 TALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPD 919 (1414)
Q Consensus 872 ~gl~dac~~lgipivgGkdSls~~~~~~~~~i~~ppTlvisa~G~v~d 919 (1414)
+|+.++|+++|++++|||+..... . ..+.+.++++|.++.
T Consensus 73 ~gi~~~~~~~~i~ivGGdT~~~~~-------~-~~~~is~t~iG~~~k 112 (113)
T d2z1ea1 73 KSMDETAREVPVPIVTGDTKVVED-------K-IEMFVITAGIGIAEH 112 (113)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEESS-------S-CCEEEEEEEEEEESS
T ss_pred HHHHHHHHHCCCEEECCCCEEECC-------C-CCEEEEEEEEEEECC
T ss_conf 999999977495785675357069-------9-762999999998669
|
| >d2zoda2 d.139.1.1 (A:155-336) Selenide, water dikinase SelD {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: Selenide, water dikinase SelD species: Aquifex aeolicus [TaxId: 63363]
Probab=99.35 E-value=2.1e-11 Score=86.90 Aligned_cols=141 Identities=17% Similarity=0.209 Sum_probs=94.4
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH----HHHHHHHCCCCEEEEECCCCC
Q ss_conf 3888667999189999918996664168999996201999999999689999999----999987245821998189883
Q 000572 924 VTPDLKLGDDGILLHIDLAKGKRRLGGSALAQVFDQVGNESPDLEDVPYLKRVFE----TVQDLIGDELVSTGHDISDGG 999 (1414)
Q Consensus 924 itp~~k~~Gd~~li~v~lg~~~~~LGGS~l~~~~~~~g~~~P~v~d~~~lk~~~~----~v~~li~~glV~A~hDvSdGG 999 (1414)
+++..++||| +|+| ...||.+++...+.+ +...++ +.....+... ..........+++++|++++|
T Consensus 1 l~rsGAkpGD--~i~v-----Tg~lG~~~~~~a~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~t~~g 70 (182)
T d2zoda2 1 ITQSGAQVGQ--LLIL-----TKPIGTGILIKGLKE-GILKEE--DINEAIENMLALNDKARNLMLSLDATACTDVTGFG 70 (182)
T ss_dssp CCSSCCCTTC--EEEE-----CSCBCHHHHHHHHHT-TSSCGG--GGHHHHHHHHSCSHHHHHHHHHTTCSEEEECCTTH
T ss_pred CCCCCCCCCC--EEEE-----CCCHHHHHHHHHHHH-CCCCHH--HHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCHHHH
T ss_conf 9757899999--9998-----951799999999983-789989--99999987530110257898842413541505566
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCCCC--------------------------------H--HHHHCC--CCCCEEEEEEC
Q ss_conf 69998997851872899980899984--------------------------------5--777605--66434999936
Q 000572 1000 LLVCTLEMSFAGNYGITLDLNSEGNS--------------------------------L--FQTLFA--EELGLVLEVSK 1043 (1414)
Q Consensus 1000 L~~aL~EMa~ag~~G~~Idl~~~~~~--------------------------------~--~~~LFs--Es~G~Vi~V~~ 1043 (1414)
|+.+|.||+.++++++.++++..+.. . +..+++ ++++++++|+|
T Consensus 71 l~~~l~~~~~~s~~~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~l~~~~~~~t~g~LL~tvp~ 150 (182)
T d2zoda2 71 LLGHAWNICKNSNIGARIFFEKVPYYQLSENLVKKKIYPKGAIENLNFVKNYLKSNLDNWKLILLSDPVTSGGLLFTINK 150 (182)
T ss_dssp HHHHHHHHHHHHTCEEEECGGGSCBCHHHHHHHHTTCCCHHHHHHHHHHTTTEECCCCHHHHHHHHCCCSSCCEEEEECG
T ss_pred HHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEECH
T ss_conf 65346654430132002323201221277888870451033454168888752027889999741275557238999689
Q ss_pred CCHHHHHHHHHHCCCCEEEEEEEECCCCEEE
Q ss_conf 8999999999883998899999808991999
Q 000572 1044 SNLDTVSKKLHDAGVSAEIIGQVNSSHSVEI 1074 (1414)
Q Consensus 1044 ~~~~~v~~~l~~~gi~~~~IG~v~~~~~l~i 1074 (1414)
++.+++.+.+++.|+++++||+|++++.+.|
T Consensus 151 e~~~~~~~~~~~~g~~~~~IG~v~~~~~~~v 181 (182)
T d2zoda2 151 EKLEKIDETAKELEVNYWIIGETIAENVLEV 181 (182)
T ss_dssp GGGGTHHHHHHHHTCCCEEEEEEESSSSEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEEEECCCCCEE
T ss_conf 9999999999976999489999984899657
|
| >d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Class I glutamine amidotransferases (GAT) domain: CTP synthase PyrG, C-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=99.32 E-value=2.5e-10 Score=79.98 Aligned_cols=201 Identities=16% Similarity=0.118 Sum_probs=110.3
Q ss_pred CEEEEEECCCCC--CHHHHHHHHHHCC----CCEEEEEC--CCCCCC--CCCCCCCCEEEECCCCCCHHHHHCCCCHHHH
Q ss_conf 789999029976--8799999999849----95299625--666575--4691374899991997824332023121677
Q 000572 1145 PKVAVIREEGSN--GDREMSAAFYAAG----FEPWDVTM--SDLING--AISLDEFRGIVFVGGFSYADVLDSAKGWSAS 1214 (1414)
Q Consensus 1145 ~kVaVl~~~G~n--~~~~~~~Al~~aG----~~~~~v~~--~dl~~~--~~~l~~~dglvlpGG~s~~D~l~ag~~~a~~ 1214 (1414)
.+|+++=-|-.- ...++..||+.|| ..+.+.++ .++... ...|.++|||++||||.+...
T Consensus 4 v~IaiVGKY~~l~DaY~Si~eAL~hA~~~~~~~v~i~wi~s~~l~~~~~~~~L~~~dGIlvPGGFG~rG~---------- 73 (250)
T d1vcoa1 4 VKIAIAGKYVKMPDAYLSLLEALRHAGIKNRARVEVKWVDAESLEAADLEEAFRDVSGILVPGGFGVRGI---------- 73 (250)
T ss_dssp EEEEEEESCC---CTTHHHHHHHHHHHHHTTEEEEEEEEEGGGC--CCHHHHTTTCSCEEECCCCSSTTH----------
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCHHCCHHHHHHHHHCCCEEEECCCCCCCCH----------
T ss_conf 8999996877983289989999998587639827899974032253558988724882895688776635----------
Q ss_pred HHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHH------CCCCCCCCCCCCCCCCCCCCCCEE--E------ECCCCCE
Q ss_conf 8510117999999880999839999025699876------096479998874578999998726--5------1598734
Q 000572 1215 IRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMAL------LGWIPGPQVGGVHGAGGDPSQPRF--V------HNESGRF 1280 (1414)
Q Consensus 1215 ~l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~------lglip~~~g~~~~~~~~~~~~p~l--~------~N~s~rf 1280 (1414)
++...+++-.. ..+.|.||||+|||+++- +|+-...... .......|.+ . .+..+..
T Consensus 74 ----eGki~ai~yAR-en~iPfLGIClGmQ~avIEfARnvlgl~~A~s~E----f~~~~~~pvi~~~~e~~~~~~~ggtm 144 (250)
T d1vcoa1 74 ----EGKVRAAQYAR-ERKIPYLGICLGLQIAVIEFARNVAGLKGANSTE----FDPHTPHPVIDLMPEQLEVEGLGGTM 144 (250)
T ss_dssp ----HHHHHHHHHHH-HTTCCEEEETHHHHHHHHHHHHHTSCCTTCEETT----TCTTCSCEEEEESCGGGCC---CCCC
T ss_pred ----HHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----CCCCCCCEEEEEECCCEECCCCCCCC
T ss_conf ----78999999998-7361699998878899999999998764056654----67899982998102201023567631
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC---CCC
Q ss_conf 98569999835898223588896799998624651780790358897316936899836999976668999899---867
Q 000572 1281 ECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDDGNPTEVYPFNVNG---SPL 1357 (1414)
Q Consensus 1281 e~r~v~v~i~~~~s~~l~g~~g~~l~~~~~Hgegr~~~~~~~~~~~l~~~~~i~~~y~d~~g~~~~~yP~NPnG---s~~ 1357 (1414)
.-.--.+.+ ...|...+-+....+. -.|-+ ||.+ ++...+.+++++++..-. +|.+ +..
T Consensus 145 RLG~~~~~l-~~~S~~~~~Y~~~~i~--ERhRH-RYev-N~~y~~~le~~gl~~sg~-------------~~d~~~~~~~ 206 (250)
T d1vcoa1 145 RLGDWPMRI-KPGTLLHRLYGKEEVL--ERHRH-RYEV-NPLYVDGLERAGLVVSAT-------------TPGMRGRGAG 206 (250)
T ss_dssp EEEEEEEEE-CTTSHHHHHHCCSEEE--EEEEE-SEEE-CHHHHHHHHHHTEEEEEE-------------CCCBTTBSTT
T ss_pred CCCCEEEEE-CCCCHHHHHCCCCEEE--EHCCC-CEEE-CHHHHHHHHHCCCCCCCC-------------CCCCCCCCCC
T ss_conf 124235466-2772787615660881--01046-3554-666667787411100243-------------7554357787
Q ss_pred CEEEEECCCCC-EEEECCCCCCCCCC
Q ss_conf 61599848985-99985678656654
Q 000572 1358 GVAAICSPDGR-HLAMMPHPERCFLM 1382 (1414)
Q Consensus 1358 ~iagi~s~dGr-vlg~m~HPEr~~~~ 1382 (1414)
-+..|--++-. .+|+|||||...++
T Consensus 207 lvEiiEl~~HPffvgvQfHPEf~Srp 232 (250)
T d1vcoa1 207 LVEAIELKDHPFFLGLQSHPEFKSRP 232 (250)
T ss_dssp CEEEEEETTSSSEEEESSCGGGGCBT
T ss_pred EEEEEECCCCCCEEEECCCCCCCCCC
T ss_conf 38999979998189965774445899
|
| >d3c9ua2 d.139.1.1 (A:138-300) Thiamine monophosphate kinase (ThiL) C-terminal domain {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: Thiamine monophosphate kinase (ThiL) C-terminal domain species: Aquifex aeolicus [TaxId: 63363]
Probab=99.28 E-value=2.2e-11 Score=86.72 Aligned_cols=137 Identities=20% Similarity=0.199 Sum_probs=86.6
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH-HHHHCCCCCCCCCCHHHHHHHH-------HHHHHHHHCCCCEEEEE
Q ss_conf 138886679991899999189966641689999-9620199999999968999999-------99999872458219981
Q 000572 923 TVTPDLKLGDDGILLHIDLAKGKRRLGGSALAQ-VFDQVGNESPDLEDVPYLKRVF-------ETVQDLIGDELVSTGHD 994 (1414)
Q Consensus 923 ~itp~~k~~Gd~~li~v~lg~~~~~LGGS~l~~-~~~~~g~~~P~v~d~~~lk~~~-------~~v~~li~~glV~A~hD 994 (1414)
.+++..+++|| +|+| .+.+|.|..+. .+.. +...+.. ....+.+.+ +..+.+ .+.++||+|
T Consensus 2 ~l~RsgAk~GD--~I~v-----Tg~lG~s~~Gl~~l~~-~~~~~~~-~~~~~i~~~~~P~~~~~~~~~l--~~~~~a~~D 70 (163)
T d3c9ua2 2 FVGRDGARLGD--SVFV-----SGTLGDSRAGLELLLM-EKEEYEP-FELALIQRHLRPTARIDYVKHI--QKYANASMD 70 (163)
T ss_dssp CCCSSCCCTTC--EEEE-----ESCSSHHHHHHHHHHT-TCSCCCH-HHHHHHHHHHSCCCCGGGHHHH--HHHCSEEEE
T ss_pred CCCCCCCCCCC--EEEE-----ECCHHHHHHHHHHHHH-HHHCCCC-HHHHHHHHHHHCCCCHHHCHHH--HHHHHHCCC
T ss_conf 47689999999--9999-----0817589999999974-1120120-7888999998407412101013--454330320
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEEEECCCC-------------CCHHHH-HC-CCCCCEEEEEECCCHHHHHHHHHHCCCC
Q ss_conf 89883699989978518728999808999-------------845777-60-5664349999368999999999883998
Q 000572 995 ISDGGLLVCTLEMSFAGNYGITLDLNSEG-------------NSLFQT-LF-AEELGLVLEVSKSNLDTVSKKLHDAGVS 1059 (1414)
Q Consensus 995 vSdGGL~~aL~EMa~ag~~G~~Idl~~~~-------------~~~~~~-LF-sEs~G~Vi~V~~~~~~~v~~~l~~~gi~ 1059 (1414)
+|| ||+.+|.+||.+|++|++|+.+.++ .+++.+ |+ +|++.+++++++++.+. .+.
T Consensus 71 iSD-GL~~dL~~ia~aS~vg~~I~~~~iPi~~~~~~~~~~~~~~~l~~~l~gGEDyellft~~~~~~~~--------~~~ 141 (163)
T d3c9ua2 71 ISD-GLVADANHLAQRSGVKIEILSEKLPLSNELKMYCEKYGKNPIEYALFGGEDYQLLFTHPKERWNP--------FLD 141 (163)
T ss_dssp ESS-CHHHHHHHHHHHHTCEEEECGGGSCCCHHHHHHHHHTTCCHHHHHHHCCCCCEEEEEECGGGCCT--------TSC
T ss_pred CCC-CHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHC--------CCC
T ss_conf 453-46666789998707733442887242678999999854546776530377636999848889746--------699
Q ss_pred EEEEEEEECCCCEEEEECCEEE
Q ss_conf 8999998089919999999898
Q 000572 1060 AEIIGQVNSSHSVEIKVDGLTH 1081 (1414)
Q Consensus 1060 ~~~IG~v~~~~~l~i~~~g~~i 1081 (1414)
+++||+|++++.+ ..+|+.+
T Consensus 142 ~~~IG~v~~g~gv--~l~G~~~ 161 (163)
T d3c9ua2 142 MTEIGRVEEGEGV--FVDGKKV 161 (163)
T ss_dssp EEEEEEEESSSSE--EETTEEC
T ss_pred CEEEEEEECCCCE--EECCCCC
T ss_conf 5189899779998--9898078
|
| >d1t3ta5 d.79.4.1 (A:617-816) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: FGAM synthase PurL, PurM-like module, N1 and N2 domains species: Salmonella typhimurium [TaxId: 90371]
Probab=99.22 E-value=1.3e-11 Score=88.14 Aligned_cols=117 Identities=9% Similarity=0.057 Sum_probs=91.6
Q ss_pred CCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCEE---EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 885079998111379988894788962346643220024799604---77867887358888899999899988899998
Q 000572 390 SQDLDVLFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFV---VASTAGYCVGNLNVEGSYAPWEDPSFTYPSNL 466 (1414)
Q Consensus 390 ~~~~~i~~kvEthn~ps~idP~~gA~tgvgg~irDi~amGrGA~P---~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~ 466 (1414)
+....+++.....+..+.+|||.||+-+|.+++|+++++ |+.| +..++++||++++.|
T Consensus 72 ~~~~g~a~s~g~np~~~~~dP~~ga~~aV~Ea~rNl~a~--Ga~~~~~i~~~~n~~~~~~~~~----------------- 132 (200)
T d1t3ta5 72 DSYYGEAMSIGERAPVALLDFAASARLAVGEALTNIAAT--QIGDIKRIKLSANWMAAAGHPG----------------- 132 (200)
T ss_dssp TCSCEEEEEEEECGGGGGTCHHHHHHHHHHHHHHHHTTS--BCCSGGGCEEEEEEECBTTSTT-----------------
T ss_pred CCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHEEC--CCCCCCEEEHHHHHHHCCCCCH-----------------
T ss_conf 984379997588886562078999999999998654122--6666421322021443259974-----------------
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCC---CCCCCCC-CCCEEEEEEEEEEECC
Q ss_conf 99699999999999999769199042242279531158---9874333-7744889999856076
Q 000572 467 ASPLQILIDASNGASDYGNKFGEPLIQGYTRTFGMRLP---SGQRREW-LKPIMFSGGIGQIDHN 527 (1414)
Q Consensus 467 ~~~~~i~~~~~~Gi~d~~n~~GvPivgG~t~s~~~~~~---~g~~~~~-~~Pl~~~~~vG~v~~~ 527 (1414)
...+.+..+..|++++|.+||+|+++|.. |+++++. +++.... ..|++.++++|.+++.
T Consensus 133 -e~~~~~~~~~~~~~d~c~~l~ip~i~Gkd-Sls~~~~~~~~~~~~~v~~PpTlvis~~g~v~Di 195 (200)
T d1t3ta5 133 -EDAGLYDAVKAVGEELCPQLGLTIPVGKD-SMSMKTRWQEGNEQREMTSPLSLVISAFARVEDV 195 (200)
T ss_dssp -HHHHHHHHHHHHHTTHHHHHTCEEEEEEE-ECBCEEEEESSSSEEEEECCCEEEEEEEEEESBG
T ss_pred -HHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCEEEECCCCCCCCEECCCCCEEEEEEEEECCC
T ss_conf -56269999999999999981988677888-7621200246885423437998389999994532
|
| >d1g2ia_ c.23.16.2 (A:) Intracellular protease {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: DJ-1/PfpI domain: Intracellular protease species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.08 E-value=4.3e-10 Score=78.45 Aligned_cols=102 Identities=17% Similarity=0.283 Sum_probs=77.8
Q ss_pred CEEEEEECCCCCCHH--HHHHHHHHCCCCEEEEECCC--------------CCCCCCCCCCCCEEEECCCCCCHHHHHCC
Q ss_conf 789999029976879--99999998499529962566--------------65754691374899991997824332023
Q 000572 1145 PKVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSD--------------LINGAISLDEFRGIVFVGGFSYADVLDSA 1208 (1414)
Q Consensus 1145 ~kVaVl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~d--------------l~~~~~~l~~~dglvlpGG~s~~D~l~ag 1208 (1414)
|||+|+.++|+.... .+..+|+++|+++.+++.+. ..-......+||+|++|||.. .+.
T Consensus 1 mKv~il~~dgf~~~E~~~p~~~l~~ag~~v~~vs~~~~~V~~~~g~~i~~d~~~~~~~~~~~d~viipGg~~-~~~---- 75 (166)
T d1g2ia_ 1 MKVLFLTANEFEDVELIYPYHRLKEEGHEVYIASFERGTITGKHGYSVKVDLTFDKVNPEEFDALVLPGGRA-PER---- 75 (166)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSEEEECTTSCEEEECEEGGGCCGGGCSEEEECCBSH-HHH----
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCEEECCCCHHHCCCCCCCEEEEECCCC-HHH----
T ss_conf 989999389868999999999999889989999688826764299177524618995824351899803341-333----
Q ss_pred CCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCC
Q ss_conf 12167785101179999998809998399990256998760964799988
Q 000572 1209 KGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVG 1258 (1414)
Q Consensus 1209 ~~~a~~~l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g~ 1258 (1414)
...++.+.+.+++|.+ .++++.+||.|..+|+++|++.+.+.+
T Consensus 76 ------~~~~~~~~~~l~~~~~-~~k~i~aiC~G~~~La~aGlL~g~~~T 118 (166)
T d1g2ia_ 76 ------VRLNEKAVSIARKMFS-EGKPVASICHGPQILISAGVLRGRKGT 118 (166)
T ss_dssp ------HTTCHHHHHHHHHHHH-TTCCEEEETTTTHHHHHHTCCTTCEEC
T ss_pred ------HCCCHHHHHHHHHHHH-CCCEEEECCCCCHHHHHCCCCCCCCCC
T ss_conf ------1248577899999885-287452036641445544834587665
|
| >d1oi4a1 c.23.16.2 (A:23-192) Hypothetical protein YhbO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: DJ-1/PfpI domain: Hypothetical protein YhbO species: Escherichia coli [TaxId: 562]
Probab=99.00 E-value=1.9e-09 Score=74.25 Aligned_cols=102 Identities=21% Similarity=0.340 Sum_probs=77.6
Q ss_pred CEEEEEECCCCCCHH--HHHHHHHHCCCCEEEEECCCC---CC-------------CCCCCCCCCEEEECCCCCCHHHHH
Q ss_conf 789999029976879--999999984995299625666---57-------------546913748999919978243320
Q 000572 1145 PKVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSDL---IN-------------GAISLDEFRGIVFVGGFSYADVLD 1206 (1414)
Q Consensus 1145 ~kVaVl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~dl---~~-------------~~~~l~~~dglvlpGG~s~~D~l~ 1206 (1414)
.||+|+.++|++... .+..+|+++|+++..+...+- .. .....++||+|++|||.. .+.
T Consensus 2 KkIail~~dgf~~~E~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~~~~~v~~d~~l~~~~~~~yDalivpGG~~-~~~-- 78 (170)
T d1oi4a1 2 KKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGHS-PDY-- 78 (170)
T ss_dssp CEEEEECCTTBCTHHHHHHHHHHHHTTCEEEEEESSTTCEEECTTSSCEEECCEEGGGCCGGGCSEEEECCBTH-HHH--
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCEEEECCCCHHHCCHHHCEEEEECCCHH-HHH--
T ss_conf 88999947983799999999999978998996247899446650367179558717998951562999724046-656--
Q ss_pred CCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCC
Q ss_conf 2312167785101179999998809998399990256998760964799988
Q 000572 1207 SAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVG 1258 (1414)
Q Consensus 1207 ag~~~a~~~l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g~ 1258 (1414)
++.++.+.+.+++|++ .++++.+||+|..+|.++|++.+.+-+
T Consensus 79 --------l~~~~~~~~~i~~~~~-~~k~i~aiC~g~~~La~~glL~g~~~T 121 (170)
T d1oi4a1 79 --------LRGDNRFVTFTRDFVN-SGKPVFAICHGPQLLISADVIRGRKLT 121 (170)
T ss_dssp --------HTTSHHHHHHHHHHHH-TTCCEEEETTTHHHHHHHTCCTTCEEC
T ss_pred --------HCCCHHHHHHHHHHHH-CCCEEEECCCCHHHHHHHHHCCCCCCC
T ss_conf --------4248378999998863-178145202234777654320255555
|
| >d2ghra1 c.23.16.8 (A:17-297) Homoserine O-succinyltransferase HTS (MetA) {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: HTS-like domain: Homoserine O-succinyltransferase HTS (MetA) species: Bacillus cereus [TaxId: 1396]
Probab=98.97 E-value=6.6e-09 Score=70.77 Aligned_cols=169 Identities=16% Similarity=0.193 Sum_probs=92.2
Q ss_pred CCCCEEEECCCCC----CHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHC--CCCCCCCCCCCC
Q ss_conf 3748999919978----2433202312167785101179999998809998399990256998760--964799988745
Q 000572 1188 DEFRGIVFVGGFS----YADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL--GWIPGPQVGGVH 1261 (1414)
Q Consensus 1188 ~~~dglvlpGG~s----~~D~l~ag~~~a~~~l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~l--glip~~~g~~~~ 1261 (1414)
+.|||+|+.|+.. |.|+. |. ..+.+.+.... +..+++||||.|.|+++.. |+.. .
T Consensus 82 ~~fDglIITGap~~~~~fedv~-----y~------~eL~eii~~a~-~~~~~~lgiCwGaQa~~~~lgGi~k----~--- 142 (281)
T d2ghra1 82 EKFDGLIITGAPVETLSFEEVD-----YW------EELKRIMEYSK-TNVTSTLHICWGAQAGLYHHYGVQK----Y--- 142 (281)
T ss_dssp CCEEEEEECCCSCTTSCGGGST-----TH------HHHHHHHHHHH-HHEEEEEEETHHHHHHHHHHHCCCC----E---
T ss_pred CCCCEEEEECCCCCCCCCCCCC-----CH------HHHHHHHHHHH-HCCCCEEEECHHHHHHHHHHCCCCC----C---
T ss_conf 5677799948987765611152-----08------99999999998-6588738870889999999679751----0---
Q ss_pred CCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCC
Q ss_conf 78999998726515987349856999983589822358889679999862465178079035889731693689983699
Q 000572 1262 GAGGDPSQPRFVHNESGRFECRFSSVTIEDSPAIMLKGMEGSTLGVWAAHGEGRAYFPDDGVLDRILHSHLAPVRYCDDD 1341 (1414)
Q Consensus 1262 ~~~~~~~~p~l~~N~s~rfe~r~v~v~i~~~~s~~l~g~~g~~l~~~~~Hgegr~~~~~~~~~~~l~~~~~i~~~y~d~~ 1341 (1414)
.+.. .........+....+++++|+ +..+++|.+|- ... ..++.... .+...+-..+
T Consensus 143 ---------~~~~-----k~~Gv~~~~~~~~~~pL~~g~-~d~f~~p~Sr~---~~~-~~d~v~~~--p~l~vLa~S~-- 199 (281)
T d2ghra1 143 ---------PLKE-----KMFGVFEHEVREQHVKLLQGF-DELFFAPHSRH---TEV-RESDIREV--KELTLLANSE-- 199 (281)
T ss_dssp ---------EEEE-----EEEEEEEEEECCSSCGGGTTC-CSEEEEEEEEE---EEC-CHHHHHTC--TTEEEEEEET--
T ss_pred ---------CCCC-----CEEEEEEEEECCCCCHHCCCC-CCHHHEEEEEC---CCC-CHHHHHHC--CCCEEEEECC--
T ss_conf ---------4798-----669999975016887000488-52332023213---017-89999518--9745884227--
Q ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCC-----------CCCCCCCCCC---CC-CCCCCHH----
Q ss_conf 997666899989986761599848985999856786566541-----------3778999877---88-9999936----
Q 000572 1342 GNPTEVYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMW-----------QYPWYPKNWN---VD-KKGPSPW---- 1402 (1414)
Q Consensus 1342 g~~~~~yP~NPnGs~~~iagi~s~dGrvlg~m~HPEr~~~~~-----------q~~~~p~~~~---~~-~~~~spw---- 1402 (1414)
..++..+.+.++|++.+|+|||=.-... ..+..|+++= .. ....--|
T Consensus 200 --------------~~g~~~~~~~~~~~~~iQgHPEYd~~tL~~EY~RD~~~g~~~~~p~nYf~~d~~~~~p~~~Wr~~a 265 (281)
T d2ghra1 200 --------------EAGVHLVIGQEGRQVFALGHSEYSCDTLKQEYERDRDKGLNIDVPKNYFKHDNPNEKPLVRWRSHG 265 (281)
T ss_dssp --------------TTEEEEEEEGGGTEEEECSCTTCCTTHHHHHHHHHHHTTCCCCCCBTTSGGGCTTSCCCCCSHHHH
T ss_pred --------------CCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf --------------764289997799889994897765138999999999769999998778987785457420368889
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999986
Q 000572 1403 LKMFQNAREW 1412 (1414)
Q Consensus 1403 ~~~F~n~~~~ 1412 (1414)
.++|.|=.+|
T Consensus 266 ~~lf~NWlny 275 (281)
T d2ghra1 266 NLLFSNWLNY 275 (281)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHCCCC
T ss_conf 9999962271
|
| >d1sy7a1 c.23.16.3 (A:553-736) Catalase, C-terminal domain {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Catalase, C-terminal domain domain: Catalase, C-terminal domain species: Neurospora crassa [TaxId: 5141]
Probab=98.96 E-value=3.4e-09 Score=72.63 Aligned_cols=104 Identities=18% Similarity=0.104 Sum_probs=78.6
Q ss_pred CCEEEEEECCCCCCHH--HHHHHHHHCCCCEEEEECCC--------------CCCCCCCCCCCCEEEECCCCCCHHHHHC
Q ss_conf 9789999029976879--99999998499529962566--------------6575469137489999199782433202
Q 000572 1144 KPKVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSD--------------LINGAISLDEFRGIVFVGGFSYADVLDS 1207 (1414)
Q Consensus 1144 ~~kVaVl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~d--------------l~~~~~~l~~~dglvlpGG~s~~D~l~a 1207 (1414)
..||+||.++|+.... .+..+|+++|+++.++..+. .........+||++++|||....+.
T Consensus 3 ~rkI~ilv~dG~~~~e~~~~~~~l~~ag~~v~ivs~~~~~v~~~~g~~v~~d~~~~~~~~~~~dalivpgg~~~~~~--- 79 (184)
T d1sy7a1 3 SRRVAIIIADGYDNVAYDAAYAAISANQAIPLVIGPRRSKVTAANGSTVQPHHHLEGFRSTMVDAIFIPGGAKAAET--- 79 (184)
T ss_dssp TCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESCSSCEEBTTSCEECCSEETTTCCGGGSSEEEECCCHHHHHH---
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC---
T ss_conf 65899995599759999999999997899899998117733432333345432112344556407999611353211---
Q ss_pred CCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCC
Q ss_conf 312167785101179999998809998399990256998760964799988
Q 000572 1208 AKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVG 1258 (1414)
Q Consensus 1208 g~~~a~~~l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g~ 1258 (1414)
...++.+.+.+++|+. .++++.+||+|.++|+++|++.+.+.+
T Consensus 80 -------~~~~~~~~~~l~~~~~-~~k~i~aic~G~~~La~aGlL~g~~~T 122 (184)
T d1sy7a1 80 -------LSKNGRALHWIREAFG-HLKAIGATGEAVDLVAKAIALPQVTVS 122 (184)
T ss_dssp -------HHTCHHHHHHHHHHHH-TTCEEEEETTHHHHHHHHHCCTTSCCC
T ss_pred -------CCCCCCHHHHHHHHHH-CCCCEEEECHHHHHHHHCCCCCCCEEC
T ss_conf -------1222100489999985-189368744189999982898996500
|
| >d1p5fa_ c.23.16.2 (A:) DJ-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: DJ-1/PfpI domain: DJ-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.91 E-value=2e-09 Score=74.18 Aligned_cols=102 Identities=15% Similarity=0.109 Sum_probs=76.8
Q ss_pred CEEEEEECCCCCCHH--HHHHHHHHCCCCEEEEECCCCC--C---C-----CCC------CCCCCEEEECCCCCCHHHHH
Q ss_conf 789999029976879--9999999849952996256665--7---5-----469------13748999919978243320
Q 000572 1145 PKVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSDLI--N---G-----AIS------LDEFRGIVFVGGFSYADVLD 1206 (1414)
Q Consensus 1145 ~kVaVl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~dl~--~---~-----~~~------l~~~dglvlpGG~s~~D~l~ 1206 (1414)
.||+|+.++|+.... .+...|+++|+++.+++..+.. . + ... .++||+|++|||....+.
T Consensus 2 Kkvlvll~~Gfe~~E~~~p~~~l~~ag~~v~~~s~~~~~~v~~~~g~~i~~d~~l~d~~~~~~~D~liipGG~~~~~~-- 79 (186)
T d1p5fa_ 2 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQN-- 79 (186)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEETTCSSCEECTTSCEECCSEEHHHHHHTCCCSEEEECCCHHHHHH--
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCCC--
T ss_conf 689999289978999999999999788989999826995366589960467500211677546468998167553010--
Q ss_pred CCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCC
Q ss_conf 231216778510117999999880999839999025699876096479998
Q 000572 1207 SAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQV 1257 (1414)
Q Consensus 1207 ag~~~a~~~l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g 1257 (1414)
+..++.+.+.+++|.+ +++++.+||.|.++|+++|++.+.+.
T Consensus 80 --------l~~~~~l~~~lr~~~~-~~k~i~aiC~G~~~La~aglL~g~~~ 121 (186)
T d1p5fa_ 80 --------LSESAAVKEILKEQEN-RKGLIAAICAGPTALLAHEIGFGSKV 121 (186)
T ss_dssp --------HHHCHHHHHHHHHHHH-TTCEEEEETTTHHHHHHTTCSTTCEE
T ss_pred --------CCCHHHHHHHHHHHHC-CCCCEEECCCCCCHHHHCCCCCCCCC
T ss_conf --------0124999999987530-46513305567320654587534553
|
| >d1p80a1 c.23.16.3 (A:598-753) Catalase, C-terminal domain {Escherichia coli, HPII [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: Catalase, C-terminal domain domain: Catalase, C-terminal domain species: Escherichia coli, HPII [TaxId: 562]
Probab=98.88 E-value=9.9e-09 Score=69.65 Aligned_cols=98 Identities=12% Similarity=-0.046 Sum_probs=76.0
Q ss_pred CCEEEEEECCCCCCHH--HHHHHHHHCCCCEEEEECCCC--------------CCCCCCCCCCCEEEECCCCCCHHHHHC
Q ss_conf 9789999029976879--999999984995299625666--------------575469137489999199782433202
Q 000572 1144 KPKVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSDL--------------INGAISLDEFRGIVFVGGFSYADVLDS 1207 (1414)
Q Consensus 1144 ~~kVaVl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~dl--------------~~~~~~l~~~dglvlpGG~s~~D~l~a 1207 (1414)
..||+||.++|+.... .+..+|+++|+++.++..+.- ........+||+|++|||. ++.
T Consensus 3 grkVaiLv~dg~~~~e~~~~~~~l~~ag~~v~~v~~~~~~v~~~~G~~i~~d~t~~~~~~~~yDaliiPGG~--~~~--- 77 (156)
T d1p80a1 3 GRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCGN--IAD--- 77 (156)
T ss_dssp TCEEEEECCTTCCHHHHHHHHHHHHHHTCEEEEEESSSSEEECTTSCEEECCEETTTSCGGGCSEEEECCSC--THH---
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECCC--HHH---
T ss_conf 768999967998889999999999978998999752445444322037865455045772217789960875--677---
Q ss_pred CCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCC
Q ss_conf 31216778510117999999880999839999025699876096479
Q 000572 1208 AKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPG 1254 (1414)
Q Consensus 1208 g~~~a~~~l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~lglip~ 1254 (1414)
+..++.+.+.+++++. .+|||..||.|.|+|..+|++..
T Consensus 78 -------l~~~~~~~~~i~e~~~-~~K~I~aic~g~~~La~agl~~~ 116 (156)
T d1p80a1 78 -------IADNGDANYYLMEAYK-HLKPIALAGDARKFKATIKIADQ 116 (156)
T ss_dssp -------HHTCHHHHHHHHHHHH-TTCCEEEEGGGGGGGGTTTCCSS
T ss_pred -------HHCCHHHHHHHHHHHH-CCCEEEEECCHHHHHHHCCCCCC
T ss_conf -------7541589999999998-69969998806999997699867
|
| >d1clia1 d.79.4.1 (A:5-170) Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.88 E-value=1.7e-08 Score=68.08 Aligned_cols=141 Identities=11% Similarity=0.046 Sum_probs=91.4
Q ss_pred HHHHHHHHC-CCCCCCEEEECCCCCEEECCCCC---CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHC
Q ss_conf 999998721-29998046430686325268753---11116899876423358850799981113799888947889623
Q 000572 342 MQIVKSTLQ-ANPNNSVIGFKDNSSAIKGFPVK---QLRPVQPGSRCQLSESSQDLDVLFTAETHNFPCAVAPYPGAETG 417 (1414)
Q Consensus 342 f~~i~~~~~-~~~~~~~~g~~Dnaavi~~~~~~---~~~~~~~g~~a~~~~~~~~~~i~~kvEthn~ps~idP~~gA~tg 417 (1414)
.+.|++..+ ...++++.++++-++.+...... .++. .++..+.+..++. + ++. ....+.-.
T Consensus 19 v~~ik~~~~~T~~~~v~~~~Ggf~g~~~~~~~~~~p~Lv~-------~tDGVGTK~~iA~--~-~~~-----~~~iG~Dl 83 (166)
T d1clia1 19 VGRIKGVVKKTRRPEVMGGLGGFGALCALPQKYREPVLVS-------GTDGVGTKLRLAM--D-LKR-----HDTIGIDL 83 (166)
T ss_dssp HHHTHHHHHTTCCTTEESCSSSSSEEEECCTTCSSEEEEE-------EEEECCTHHHHHH--H-TTC-----CSSHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCEEEE-------EECCCCHHHHHHH--H-HHH-----HCCCCHHH
T ss_conf 9999999985168876566678764333232258727999-------6156442539998--7-642-----16702146
Q ss_pred CCCCCCCHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEE
Q ss_conf 46643220024799604778678873588888999998999888999989969999999999999976919904224227
Q 000572 418 AGGRIRDTHATGRGSFVVASTAGYCVGNLNVEGSYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGYTR 497 (1414)
Q Consensus 418 vgg~irDi~amGrGA~P~a~l~~l~~g~~~~P~~~~~w~~~~~~~~~~~~~~~~i~~~~~~Gi~d~~n~~GvPivgG~t~ 497 (1414)
|+.+++|++++ ||+|++++|.+..++++ .+.+.++++|+.+.|.+.|++++||+|.
T Consensus 84 Vam~vNDil~~--GA~Pl~flDY~a~~~~~----------------------~~~~~~iv~Gi~~ac~~~~~~LiGGETA 139 (166)
T d1clia1 84 VAMCVNDLVVQ--GAEPLFFLDYYATGKLD----------------------VDTASAVISGIAEGCLQSGCSLVGGETA 139 (166)
T ss_dssp HHHHHHHHGGG--TCEEEEEEEEEEESSCC----------------------HHHHHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred HHHCCCHHHHC--CHHHHHHHHHHHHCCCC----------------------HHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 76656516652--58999988853203554----------------------6899999999999999948842055321
Q ss_pred EECCCCCCCCCCCCC-CCEEEE-EEEEEEECCCC
Q ss_conf 953115898743337-744889-99985607662
Q 000572 498 TFGMRLPSGQRREWL-KPIMFS-GGIGQIDHNHI 529 (1414)
Q Consensus 498 s~~~~~~~g~~~~~~-~Pl~~~-~~vG~v~~~~i 529 (1414)
.+..- |. +-.-++ +++|.++++++
T Consensus 140 empgv--------y~~~~~DLaG~~vGivek~~i 165 (166)
T d1clia1 140 EMPGM--------YHGEDYDVAGFCVGVVEKSEI 165 (166)
T ss_dssp ECTTT--------SCTTCEEEEEEEEEEEEGGGC
T ss_pred CCCCC--------CCCCCEEEEEEEEEEEECCCC
T ss_conf 25676--------799987877678999822544
|
| >d2fexa1 c.23.16.2 (A:1-188) Hypothetical protein Atu0886 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: DJ-1/PfpI domain: Hypothetical protein Atu0886 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.85 E-value=1.1e-08 Score=69.27 Aligned_cols=100 Identities=17% Similarity=0.227 Sum_probs=73.9
Q ss_pred CEEEEEECCCCCCHH--HHHHHHHH-CCCCEEEEECCCC--------------CCCCCCCCCCCEEEECCCCCCHHHHHC
Q ss_conf 789999029976879--99999998-4995299625666--------------575469137489999199782433202
Q 000572 1145 PKVAVIREEGSNGDR--EMSAAFYA-AGFEPWDVTMSDL--------------INGAISLDEFRGIVFVGGFSYADVLDS 1207 (1414)
Q Consensus 1145 ~kVaVl~~~G~n~~~--~~~~Al~~-aG~~~~~v~~~dl--------------~~~~~~l~~~dglvlpGG~s~~D~l~a 1207 (1414)
.||+|+.++|+.... .+..+|++ +|+++..++.+.. .-......+||.|++|||....+
T Consensus 2 ~kv~vll~~gf~~~E~~~~~~~l~~~~g~~v~~vs~~~~~V~s~~G~~v~~d~~l~~~~~~~~D~liipGG~~~~~---- 77 (188)
T d2fexa1 2 TRIAIALAQDFADWEPALLAAAARSYLGVEIVHATPDGMPVTSMGGLKVTPDTSYDALDPVDIDALVIPGGLSWEK---- 77 (188)
T ss_dssp CEEEEECCTTBCTTSSHHHHHHHHHHSCCEEEEEETTSSCEECTTCCEEECSEEGGGCCTTTCSEEEECCBSHHHH----
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCEEEECCCHHHCCHHHCCEEEECCCCCCCC----
T ss_conf 7899996798529999999999754189689999579996784899989616765888930335899647766433----
Q ss_pred CCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCC
Q ss_conf 31216778510117999999880999839999025699876096479998
Q 000572 1208 AKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQV 1257 (1414)
Q Consensus 1208 g~~~a~~~l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g 1257 (1414)
..++.+.+.+++|.. .++++.+||.|..+|+++|++.+.+-
T Consensus 78 --------~~~~~l~~~lr~~~~-~~~~i~aiC~g~~~La~aGlL~g~~~ 118 (188)
T d2fexa1 78 --------GTAADLGGLVKRFRD-RDRLVAGICAAASALGGTGVLNDVAH 118 (188)
T ss_dssp --------TCCCCCHHHHHHHHH-TTCEEEEETHHHHHHHHTTTTTTSCB
T ss_pred --------CCCHHHHHHHHHHHH-HCCEEEEECCHHHHHHHCCCCCCCEE
T ss_conf --------441999999999997-39979974502678987476589477
|
| >d2ab0a1 c.23.16.2 (A:2-196) Protein ThiJ (YajL) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: DJ-1/PfpI domain: Protein ThiJ (YajL) species: Escherichia coli [TaxId: 562]
Probab=98.85 E-value=7.5e-09 Score=70.40 Aligned_cols=103 Identities=15% Similarity=0.218 Sum_probs=76.4
Q ss_pred CEEEEEECCCCCCHH--HHHHHHHHCCCCEEEEECCCC-----CC------------CCCCCCCCCEEEECCCCCCHHHH
Q ss_conf 789999029976879--999999984995299625666-----57------------54691374899991997824332
Q 000572 1145 PKVAVIREEGSNGDR--EMSAAFYAAGFEPWDVTMSDL-----IN------------GAISLDEFRGIVFVGGFSYADVL 1205 (1414)
Q Consensus 1145 ~kVaVl~~~G~n~~~--~~~~Al~~aG~~~~~v~~~dl-----~~------------~~~~l~~~dglvlpGG~s~~D~l 1205 (1414)
.+++|+..+|+.... .+...|+++|+++.++..... .. ......+||.|++|||....+.
T Consensus 2 ~~ali~l~~Gfe~~E~~~p~d~L~rag~~v~~~s~~~~~~~~v~~~~G~~v~~d~~~~d~~~~d~D~liiPGG~~~~~~- 80 (195)
T d2ab0a1 2 ASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAEC- 80 (195)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEECSSTTCCEEECTTSCEEECSEEHHHHTTSCCSEEEECCCHHHHHH-
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCEEECCCCHHHCCCCCCEEEEECCCCCCCCC-
T ss_conf 5699994499319999999999998899899998718998668847995762676767768022249997565575211-
Q ss_pred HCCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHH-HHHHHHCCCCCCCCCC
Q ss_conf 0231216778510117999999880999839999025-6998760964799988
Q 000572 1206 DSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNG-CQLMALLGWIPGPQVG 1258 (1414)
Q Consensus 1206 ~ag~~~a~~~l~~~~l~~~i~~f~~r~~~~iLGIC~G-~QlL~~lglip~~~g~ 1258 (1414)
+..++.+.+.+++|.+ +++++.+||.| ..+|.+.|++.+.+.+
T Consensus 81 ---------l~~~~~l~~~lr~~~~-~gk~i~aiC~g~a~lLa~aGlL~g~~~T 124 (195)
T d2ab0a1 81 ---------FRDSTLLVETVKQFHR-SGRIVAAICAAPATVLVPHDIFPIGNMT 124 (195)
T ss_dssp ---------HHHCHHHHHHHHHHHH-TTCEEEEETHHHHHHTTTTTSSSSSCBC
T ss_pred ---------CCCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHCCCCCCCEEE
T ss_conf ---------2221999999998764-0331563102410235545855898884
|
| >d1vhqa_ c.23.16.2 (A:) Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: DJ-1/PfpI domain: Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) species: Escherichia coli [TaxId: 562]
Probab=98.85 E-value=5.7e-09 Score=71.17 Aligned_cols=130 Identities=13% Similarity=0.054 Sum_probs=82.1
Q ss_pred CEEEEEE-----CCCCCCHH--HHHHHHHHCCCCEEEEECCCC--------------------------------CCCCC
Q ss_conf 7899990-----29976879--999999984995299625666--------------------------------57546
Q 000572 1145 PKVAVIR-----EEGSNGDR--EMSAAFYAAGFEPWDVTMSDL--------------------------------INGAI 1185 (1414)
Q Consensus 1145 ~kVaVl~-----~~G~n~~~--~~~~Al~~aG~~~~~v~~~dl--------------------------------~~~~~ 1185 (1414)
.||+|+. +.|+.-.+ .++.+|+++|++++.+..+.- .-...
T Consensus 2 kKvaviLsg~g~~DG~E~~E~~~~~~~L~raG~~v~~~sp~~~~~~~~~h~~~~~~~~~r~~~~~~~~i~~~~~~~l~~v 81 (217)
T d1vhqa_ 2 KKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQA 81 (217)
T ss_dssp CEEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSBCSCCBCTTTCCBCSCCCBHHHHHTTTTTTCCEEGGGC
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCCHHHC
T ss_conf 87999955888877420989999999999889989999469984521506888623542352432102301356876788
Q ss_pred CCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 91374899991997824332023121677851011799999988099983999902569987609647999887457899
Q 000572 1186 SLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWIPGPQVGGVHGAGG 1265 (1414)
Q Consensus 1186 ~l~~~dglvlpGG~s~~D~l~ag~~~a~~~l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~lglip~~~g~~~~~~~~ 1265 (1414)
+.++||+|+||||+...+.+....--......++.+.+.+++|++ .+||+.+||+|.++|..++.+.++..
T Consensus 82 ~~~~yDaliiPGG~g~~~~l~~~~~~~~~~~~~~~v~~li~~~~~-~gk~iaaIC~gp~~l~~~~~~~~~~~-------- 152 (217)
T d1vhqa_ 82 DAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQ-AGKPLGFMCIAPAMLPKIFDFPLRLT-------- 152 (217)
T ss_dssp CGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHH-TTCCEEEETTGGGGHHHHCSSCCEEC--------
T ss_pred CHHHCCEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH-CCCCEEEECHHHHHHHHHHCCCCCEE--------
T ss_conf 984787899669866377776521024212228999999999998-69979998860899999846488715--------
Q ss_pred CCCCCE---EEECCCCCEEEE
Q ss_conf 999872---651598734985
Q 000572 1266 DPSQPR---FVHNESGRFECR 1283 (1414)
Q Consensus 1266 ~~~~p~---l~~N~s~rfe~r 1283 (1414)
...+|. ...|..++|++.
T Consensus 153 ~~~~~~~~~~l~~~Ga~~v~~ 173 (217)
T d1vhqa_ 153 IGTDIDTAEVLEEMGAEHVPC 173 (217)
T ss_dssp CCSCHHHHHHHHHTTCEECCC
T ss_pred ECCCHHHHHHHHHCCCCEEEC
T ss_conf 415853599999769908965
|
| >d1u9ca_ c.23.16.2 (A:) GK2698 ortholog {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: DJ-1/PfpI domain: GK2698 ortholog species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.67 E-value=7.5e-08 Score=63.98 Aligned_cols=82 Identities=16% Similarity=0.158 Sum_probs=60.8
Q ss_pred HHHHHHHHCCCCEEEEECCC---------------------------CCCCCCCCCCCCEEEECCCCCCHHHHHCCCCHH
Q ss_conf 99999998499529962566---------------------------657546913748999919978243320231216
Q 000572 1160 EMSAAFYAAGFEPWDVTMSD---------------------------LINGAISLDEFRGIVFVGGFSYADVLDSAKGWS 1212 (1414)
Q Consensus 1160 ~~~~Al~~aG~~~~~v~~~d---------------------------l~~~~~~l~~~dglvlpGG~s~~D~l~ag~~~a 1212 (1414)
.++..|+++|+++++++..- +.-...+.++||+|++|||......+
T Consensus 30 ~P~~~l~~aG~~V~~aS~~gg~~~~d~~~~~~~~~~~~~~~~~l~~~~~l~~v~~~dYd~v~iPGG~g~~~~l------- 102 (221)
T d1u9ca_ 30 VPYLVFQEKGYDVKVASIQGGEVPLDPRSINEKDPSWAEAEAALKHTARLSKDDAHGFDAIFLPGGHGTMFDF------- 102 (221)
T ss_dssp HHHHHHHHTTCEEEEEESSCBCCCBCGGGSSSCCGGGHHHHHHTTSBEECCGGGGSSCSEEEECCCTTHHHHS-------
T ss_pred HHHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCHHHCCHHHCCEEEECCCCCHHHCC-------
T ss_conf 9999999889979999648985201367552000025777778607788567898678889927987266524-------
Q ss_pred HHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCC
Q ss_conf 7785101179999998809998399990256998760964
Q 000572 1213 ASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALLGWI 1252 (1414)
Q Consensus 1213 ~~~l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~lgli 1252 (1414)
..++.+.+.++.|++ .+|++.+||+|.++|...+..
T Consensus 103 ---~~~~~l~~li~~~~~-~~k~iaAIChgp~~l~~a~~~ 138 (221)
T d1u9ca_ 103 ---PDNETLQYVLQQFAE-DGRIIAAVCHGPSGLVNATYK 138 (221)
T ss_dssp ---TTCHHHHHHHHHHHH-TTCEEEEETTGGGGGTTCBCT
T ss_pred ---HHHHHHHHHHHHHHH-CCCCCEEECCCCEEEECCCCC
T ss_conf ---026899999999875-358212410263000034368
|
| >d1qvwa_ c.23.16.2 (A:) Hypothetical protein Ydr533Cp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: DJ-1/PfpI domain: Hypothetical protein Ydr533Cp species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.59 E-value=2.4e-07 Score=60.74 Aligned_cols=79 Identities=18% Similarity=0.163 Sum_probs=58.0
Q ss_pred HHHHHHHHCCCCEEEEECC------------------------------------CCCCCCCCCCCCCEEEECCCCCCHH
Q ss_conf 9999999849952996256------------------------------------6657546913748999919978243
Q 000572 1160 EMSAAFYAAGFEPWDVTMS------------------------------------DLINGAISLDEFRGIVFVGGFSYAD 1203 (1414)
Q Consensus 1160 ~~~~Al~~aG~~~~~v~~~------------------------------------dl~~~~~~l~~~dglvlpGG~s~~D 1203 (1414)
..+.+|+++|+++.+++.+ +......+.++||+|+||||...-.
T Consensus 32 ~P~~~l~~aG~~V~iASp~G~~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~ydav~ipGG~g~~~ 111 (236)
T d1qvwa_ 32 HPFNTFRKEGFEVDFVSETGKFGWDEHSLAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFMASAGHGTLF 111 (236)
T ss_dssp HHHHHHHHTTCEEEEECSSSCCCBCGGGGSTTTSCHHHHHHHHCTTSHHHHHHHTCBCGGGCCGGGCSEEEECCSTTHHH
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCEEEEECCCCCHH
T ss_conf 99999997798599988999888886543201146277788765008888877434676568985798999807764400
Q ss_pred HHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHC
Q ss_conf 3202312167785101179999998809998399990256998760
Q 000572 1204 VLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1204 ~l~ag~~~a~~~l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~l 1249 (1414)
. +..++.+.+.++.|++ .+|+|..||+|.++|..+
T Consensus 112 d----------l~~~~~l~~li~~~~~-~gk~vaAIChGp~~L~~~ 146 (236)
T d1qvwa_ 112 D----------YPKAKDLQDIASEIYA-NGGVVAAVCHGPAMFDGL 146 (236)
T ss_dssp H----------GGGCHHHHHHHHHHHH-TTCEEEEETTGGGGGTTC
T ss_pred C----------CHHHHHHHHHHHHHHH-CCCEEEEEHHHHHHHHHH
T ss_conf 0----------0566678999999986-698589821357999877
|
| >d1clia2 d.139.1.1 (A:171-345) Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.41 E-value=5.8e-07 Score=58.23 Aligned_cols=148 Identities=14% Similarity=0.122 Sum_probs=93.6
Q ss_pred CCCCCCEEEEECCCCCCCCCCHHHHHHH--HHCCCCCCCCCCCCCCCCHHHHHHHHH---HHHHHHHHHCCCCCEEEECC
Q ss_conf 9999999999915887666427889986--618998866665335799999999999---99999983225990399859
Q 000572 533 EPDIGMLVVKIGGPAYRIGMGGGAASSM--VSGQNDADLDFNAVQRGDAEMAQKLYR---VVRACIEMGETNPIISIHDQ 607 (1414)
Q Consensus 533 ~a~~GD~Ivv~G~~tgr~GlgGa~~ss~--~~~~~~~~~~~~~Vq~~dp~~ek~l~~---~i~~~~el~~~~~i~ai~Di 607 (1414)
..++||+|+-+.+ .|+|.-.||.. ............. .-+...-+..+.. ....+..+.+...+++|-.+
T Consensus 4 ~i~~GDviiGl~S----sG~HSNGySLvRkil~~~~~~~~~~~-~~~~tl~e~LL~PTriY~~~i~~l~~~~~i~g~aHI 78 (175)
T d1clia2 4 KVSDGDVLIALGS----SGPHSNGYSLVRKILEVSGCDPQTTE-LDGKPLADHLLAPTRIYVKSVLELIEKVDVHAIAHL 78 (175)
T ss_dssp TCCTTCEEEEEEC----SSSTTSSHHHHHHHHHHTTCCTTTCB-SSSSBHHHHHHCCCCCCHHHHHHHHHHSCCCEEEEC
T ss_pred CCCCCCEEEEECC----CCCCCCHHHHHHHHHHHHHHHCCCCC-CCCCCHHHHHHHCEEEHHHHHHHHHHHCCCCEEEEE
T ss_conf 1688999999658----88776707999999997540100023-368848998631322032548899860563203456
Q ss_pred CCCCHHHHHHHHHC-CCEEEEEECCCCCCCC--------CCCHHHHHCCCCC-CEEEEEECCCCHHHHHHHHHHCCCCEE
Q ss_conf 97838888998746-9819999078777878--------8228999604345-216999967897899999977399727
Q 000572 608 GAGGNCNVVKEIIY-PKGAEIDIRAIIVGDH--------TLSVLEIWGAEYQ-EQDAVLVKPESRDLLQSICERERVSMA 677 (1414)
Q Consensus 608 gaGGL~~al~Ela~-~~G~~Idl~~iP~~~~--------~l~p~ei~~sEsq-er~ll~V~pe~~~~l~~i~~~~~~~~~ 677 (1414)
+.||+..-+..+.. +++++|+.+..|..+- +++..|++-.-.. =.|++.|+|++.+++.+++++.+.++.
T Consensus 79 TGGGl~~Nl~Rvlp~~~~~~i~~~~w~~P~iF~~i~~~g~vs~~EM~~tFNmGIGmvliV~~~~~~~v~~~l~~~g~~a~ 158 (175)
T d1clia2 79 TGGGFWENIPRVLPDNTQAVIDESSWQWPEVFNWLQTAGNVEHHEMYRTFNCGVGMIIALPAPEVDKALALLNANGENAW 158 (175)
T ss_dssp CTTHHHHHGGGSCCTTEEEEECGGGCCCCHHHHHHHHHHTCCHHHHHHHCCTTEEEEEEECGGGHHHHHHHHHTTTCCEE
T ss_pred ECCCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHEECCCCEEEEEECHHHHHHHHHHHHHCCCCCE
T ss_conf 12243235458606652689905878985389999981896476685301686339999878999999999997699868
Q ss_pred EEEEEECC
Q ss_conf 99999948
Q 000572 678 VIGTISGE 685 (1414)
Q Consensus 678 vIG~vt~~ 685 (1414)
+||+|+..
T Consensus 159 ~IG~V~~~ 166 (175)
T d1clia2 159 KIGIIKAS 166 (175)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
T ss_conf 99999988
|
| >d1n57a_ c.23.16.2 (A:) HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Class I glutamine amidotransferase-like family: DJ-1/PfpI domain: HSP31 (HchA; YedU) species: Escherichia coli [TaxId: 562]
Probab=98.19 E-value=2.4e-06 Score=54.33 Aligned_cols=95 Identities=25% Similarity=0.298 Sum_probs=65.8
Q ss_pred CCEEEEEECC--------C----CCCH-H---HHHHHHHHCCCCEEEEECCC------CCC-------------------
Q ss_conf 9789999029--------9----7687-9---99999998499529962566------657-------------------
Q 000572 1144 KPKVAVIREE--------G----SNGD-R---EMSAAFYAAGFEPWDVTMSD------LIN------------------- 1182 (1414)
Q Consensus 1144 ~~kVaVl~~~--------G----~n~~-~---~~~~Al~~aG~~~~~v~~~d------l~~------------------- 1182 (1414)
+.||+|+.-. | ++.+ . ..+..|+++||++.+++.+- ..+
T Consensus 44 ~~kIL~V~s~~~~~~~~~g~~~~TG~~~~E~~~P~~~l~~AG~eVdiASp~G~~~~~D~~s~~~~d~~~~~~~~~~~~~~ 123 (279)
T d1n57a_ 44 KHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAMPHKDEKVMPFFEQHKSLF 123 (279)
T ss_dssp SCEEEEECCSCCEEECTTSCEEECCBCHHHHHHHHHHHHHTTCCEEEEESSSCCCCBCGGGCCTTCTTHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 85499997373310267986436766899999999999978987999778999777683236653477899998378887
Q ss_pred -----------CCCCCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHC
Q ss_conf -----------5469137489999199782433202312167785101179999998809998399990256998760
Q 000572 1183 -----------GAISLDEFRGIVFVGGFSYADVLDSAKGWSASIRFNQPLLNQFQEFYKRPDTFSLGVCNGCQLMALL 1249 (1414)
Q Consensus 1183 -----------~~~~l~~~dglvlpGG~s~~D~l~ag~~~a~~~l~~~~l~~~i~~f~~r~~~~iLGIC~G~QlL~~l 1249 (1414)
......+||+|++|||... ..+ +..++.+.+.++.|++ .+|++..||+|..+|..+
T Consensus 124 ~~~~~L~dv~~~~~~~~dYdav~iPGGhG~--~~d--------L~~~~~l~~ll~~~~~-~gk~vaaICHGPa~Ll~a 190 (279)
T d1n57a_ 124 RNPKKLADVVASLNADSEYAAIFVPGGHGA--LIG--------LPESQDVAAALQWAIK-NDRFVISLCHGPAAFLAL 190 (279)
T ss_dssp HSCEEHHHHHHTCCTTCSEEEEEECCSGGG--GSS--------GGGCHHHHHHHHHHHH-TTCEEEEETTGGGGGGGG
T ss_pred HCCHHHHHHHHCCCCCCCCCEEEECCCCCC--HHH--------HHHHHHHHHHHHHHHH-CCCCCEECCCCCHHHHHC
T ss_conf 472114342111166212528995588640--334--------1678899999999997-399503011110011120
|
| >d1clia2 d.139.1.1 (A:171-345) Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.95 E-value=0.00022 Score=41.67 Aligned_cols=137 Identities=19% Similarity=0.302 Sum_probs=94.0
Q ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHCC--CCCCCCCCHHHHHHH-------HHHHHHHHHCCCCEEEEECCCCCH
Q ss_conf 79991899999189966641689999962019--999999996899999-------999999872458219981898836
Q 000572 930 LGDDGILLHIDLAKGKRRLGGSALAQVFDQVG--NESPDLEDVPYLKRV-------FETVQDLIGDELVSTGHDISDGGL 1000 (1414)
Q Consensus 930 ~~Gd~~li~v~lg~~~~~LGGS~l~~~~~~~g--~~~P~v~d~~~lk~~-------~~~v~~li~~glV~A~hDvSdGGL 1000 (1414)
++|| .+|-+. +.+-..=|-|...+++...+ ...+..++......+ ...+..+.++..|+++--|+.|||
T Consensus 6 ~~GD-viiGl~-SsG~HSNGySLvRkil~~~~~~~~~~~~~~~tl~e~LL~PTriY~~~i~~l~~~~~i~g~aHITGGGl 83 (175)
T d1clia2 6 SDGD-VLIALG-SSGPHSNGYSLVRKILEVSGCDPQTTELDGKPLADHLLAPTRIYVKSVLELIEKVDVHAIAHLTGGGF 83 (175)
T ss_dssp CTTC-EEEEEE-CSSSTTSSHHHHHHHHHHTTCCTTTCBSSSSBHHHHHHCCCCCCHHHHHHHHHHSCCCEEEECCTTHH
T ss_pred CCCC-EEEEEC-CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCEEEHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 8899-999965-88877670799999999754010002336884899863132203254889986056320345612243
Q ss_pred HHHHHHHHHCCCEEEEEEECCCCC---------------CHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEE
Q ss_conf 999899785187289998089998---------------45777605664349999368999999999883998899999
Q 000572 1001 LVCTLEMSFAGNYGITLDLNSEGN---------------SLFQTLFAEELGLVLEVSKSNLDTVSKKLHDAGVSAEIIGQ 1065 (1414)
Q Consensus 1001 ~~aL~EMa~ag~~G~~Idl~~~~~---------------~~~~~LFsEs~G~Vi~V~~~~~~~v~~~l~~~gi~~~~IG~ 1065 (1414)
..-+-.+ +..++++.|+.+..+. +.+..-|+-.-|+++.|++++++++.+.+++.|..+.+||+
T Consensus 84 ~~Nl~Rv-lp~~~~~~i~~~~w~~P~iF~~i~~~g~vs~~EM~~tFNmGIGmvliV~~~~~~~v~~~l~~~g~~a~~IG~ 162 (175)
T d1clia2 84 WENIPRV-LPDNTQAVIDESSWQWPEVFNWLQTAGNVEHHEMYRTFNCGVGMIIALPAPEVDKALALLNANGENAWKIGI 162 (175)
T ss_dssp HHHGGGS-CCTTEEEEECGGGCCCCHHHHHHHHHHTCCHHHHHHHCCTTEEEEEEECGGGHHHHHHHHHTTTCCEEEEEE
T ss_pred CCCCEEE-CCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHEECCCCEEEEEECHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 2354586-066526899058789853899999818964766853016863399998789999999999976998689999
Q ss_pred EECC
Q ss_conf 8089
Q 000572 1066 VNSS 1069 (1414)
Q Consensus 1066 v~~~ 1069 (1414)
|.+.
T Consensus 163 V~~~ 166 (175)
T d1clia2 163 IKAS 166 (175)
T ss_dssp EEEC
T ss_pred EEEC
T ss_conf 9988
|
| >d1t3ta4 d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: FGAM synthase PurL, PurM-like module, N1 and N2 domains species: Salmonella typhimurium [TaxId: 90371]
Probab=97.49 E-value=0.00016 Score=42.57 Aligned_cols=114 Identities=8% Similarity=-0.120 Sum_probs=78.7
Q ss_pred EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC--HHCCCCCCCCCCCCCCCCCCCCCC------------CC---CH-HH
Q ss_conf 37499985479988889999999999998510--111476541011123322334478------------87---17-99
Q 000572 805 TGGACAIGEQPIKGLLNPKAMARLAVGEALTN--LVWAKVTSLSHVKASGNWMYAAKL------------DG---EG-AA 866 (1414)
Q Consensus 805 ~gia~s~g~~p~~~~~dP~~ga~~AV~eai~n--iaa~Ga~pl~~v~~s~n~~~p~~~------------~~---~~-~~ 866 (1414)
..+++++..|+..+.++||.||...|..-+|| +..|||+|++.++ ++.|+.+... +. .+ .-
T Consensus 67 ~~~~~k~EtHNhPsai~Pf~GAaTGvGG~iRD~~~~g~Ga~piA~~~-~~~~g~l~~~~~~~~~e~~~~~~~~~~~~~~I 145 (209)
T d1t3ta4 67 AHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLV-GFSVSNLRIPGFEQPWEEDFGKPERIVTALDI 145 (209)
T ss_dssp EEEEEEEEECHHHHHHCHHHHHHHHHHHHHHHHHTSTTCCEEEEEEE-EEEESCCCCTTCCCTTCCCCCCCTTSCCHHHH
T ss_pred EEEEEEEECCCCCCEECCCCCCCCCCCCCEEEHHHCCCCCEEEEEEE-EEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 37999861478985116767765543660675325066668875236-89985136766546552445775455672014
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC---C-EEECCCCEEEEEEEECCC
Q ss_conf 9999999999999929810234432223222699---3-000087389999998189
Q 000572 867 MYDAATALAEAMIELGIAIDGGKDSLSMAAYSGG---E-VVKAPGSLVISVYVTCPD 919 (1414)
Q Consensus 867 l~~a~~gl~dac~~lgipivgGkdSls~~~~~~~---~-~i~~ppTlvisa~G~v~d 919 (1414)
+.+++.|..++-.++|.|.++|-..+......+. + .--..|.+.+.++|.+..
T Consensus 146 ~~~~~~G~~~ygN~~G~P~i~g~~~~~~~~~~~~~~~~~~~~~kPim~~ggiG~i~~ 202 (209)
T d1t3ta4 146 MTEGPLGGAAFNNEFGRPALTGYFRTYEEKVNSHNGEELRGYHKPIMLAGGIGNIRA 202 (209)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEECEEEEEETTEEEEEECSSCEEEEEEEEEECG
T ss_pred CCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCEEEECCCEEECH
T ss_conf 035654423446756899742679992541355543102218997699740167148
|
| >d1clia1 d.79.4.1 (A:5-170) Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Bacillus chorismate mutase-like superfamily: PurM N-terminal domain-like family: PurM N-terminal domain-like domain: Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.32 E-value=0.00017 Score=42.29 Aligned_cols=118 Identities=14% Similarity=-0.001 Sum_probs=77.3
Q ss_pred CCCEEEEEECC-CCCEEEEEEECCCCCCCCCCH-----HHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 68389998459-881374999854799888899-----999999999985101114765410111233223344788717
Q 000572 791 LADVAVIAQTY-TDLTGGACAIGEQPIKGLLNP-----KAMARLAVGEALTNLVWAKVTSLSHVKASGNWMYAAKLDGEG 864 (1414)
Q Consensus 791 ~~DaAVi~~~~-~~~~gia~s~g~~p~~~~~dP-----~~ga~~AV~eai~niaa~Ga~pl~~v~~s~n~~~p~~~~~~~ 864 (1414)
++-++.+.... .....+++++|.-.-+..+-. ...|+-.|+.+++||+++||+|+..++. +..+ + -++
T Consensus 39 Ggf~g~~~~~~~~~~p~Lv~~tDGVGTK~~iA~~~~~~~~iG~DlVam~vNDil~~GA~Pl~flDY---~a~~-~--~~~ 112 (166)
T d1clia1 39 GGFGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEPLFFLDY---YATG-K--LDV 112 (166)
T ss_dssp SSSSEEEECCTTCSSEEEEEEEEECCTHHHHHHHTTCCSSHHHHHHHHHHHHHGGGTCEEEEEEEE---EEES-S--CCH
T ss_pred CCCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHCCHHHHHHHHH---HHHC-C--CCH
T ss_conf 787643332322587279996156442539998764216702146766565166525899998885---3203-5--546
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCC
Q ss_conf 9999999999999999298102344322232226993000087389999998189
Q 000572 865 AAMYDAATALAEAMIELGIAIDGGKDSLSMAAYSGGEVVKAPGSLVISVYVTCPD 919 (1414)
Q Consensus 865 ~~l~~a~~gl~dac~~lgipivgGkdSls~~~~~~~~~i~~ppTlvisa~G~v~d 919 (1414)
+.+.+.++|+.++|++.+++++||.+.--... +.+... -|.-+++|.++.
T Consensus 113 ~~~~~iv~Gi~~ac~~~~~~LiGGETAempgv-y~~~~~----DLaG~~vGivek 162 (166)
T d1clia1 113 DTASAVISGIAEGCLQSGCSLVGGETAEMPGM-YHGEDY----DVAGFCVGVVEK 162 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEEEEECTTT-SCTTCE----EEEEEEEEEEEG
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCE----EEEEEEEEEEEC
T ss_conf 89999999999999994884205532125676-799987----877678999822
|
| >d1vq3a_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurS-like superfamily: PurS-like family: PurS subunit of FGAM synthetase domain: PurS subunit of FGAM synthetase species: Thermotoga maritima [TaxId: 2336]
Probab=97.15 E-value=0.0011 Score=37.21 Aligned_cols=69 Identities=10% Similarity=0.040 Sum_probs=54.4
Q ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCC---HHHHHHHHH-HCCCCCCCC
Q ss_conf 229999906987688465679999999099967818999999983278888---568989987-106653211
Q 000572 175 KAVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQ---DNQINDFAA-MVHDRMTEC 243 (1414)
Q Consensus 175 ~~~~i~V~pr~g~~~~~ss~a~~i~~~~gl~~v~rie~~~~y~i~~~~~~~---~~~~~~~~~-~l~d~mte~ 243 (1414)
+.|.|+|.||+|+.||.+..+...++..|...++.+..|+.|.+....... .++.+.++. +|.|+.+|.
T Consensus 8 ~k~~V~V~~K~gVlDPqG~av~~aL~~lG~~~v~~vr~gK~~~~~i~~~d~e~a~~~v~~~c~~lLaNpvIE~ 80 (86)
T d1vq3a_ 8 FKFAIDVQYRSNVRDPRGETIERVLREEKGLPVKKLRLGKSIHLEVEAENKEKAYEIVKKACEELLVNPVVEE 80 (86)
T ss_dssp EEEEEEEEECTTSCCHHHHHHHHHHHHTTCCCEEEEEEEEEEEEEEECSSHHHHHHHHHHHHHHTTSCTTTEE
T ss_pred EEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 8999999989987271799999999872787766068888999998069989999999999998717765038
|
| >d1gtda_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurS-like superfamily: PurS-like family: PurS subunit of FGAM synthetase domain: PurS subunit of FGAM synthetase species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.74 E-value=0.0045 Score=33.19 Aligned_cols=68 Identities=9% Similarity=0.095 Sum_probs=52.9
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCC---HHHHHHHHH-HCCCCCCCCC
Q ss_conf 29999906987688465679999999099967818999999983278888---568989987-1066532111
Q 000572 176 AVIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQ---DNQINDFAA-MVHDRMTECV 244 (1414)
Q Consensus 176 ~~~i~V~pr~g~~~~~ss~a~~i~~~~gl~~v~rie~~~~y~i~~~~~~~---~~~~~~~~~-~l~d~mte~~ 244 (1414)
.+.|+|.+|+|+.||.+......++++|.. ++.|..++.|.+....+.. ..+.+.++. +|.|+.+|..
T Consensus 3 ~v~V~V~lK~gVlDPqG~ai~~aL~~lG~~-v~~Vr~gK~~~l~i~~~~~e~a~~~v~~~c~~lLaNpvIE~y 74 (82)
T d1gtda_ 3 MVEVRIRLKKGMLNPEAATIERALALLGYE-VEDTDTTDVITFTMDEDSLEAVEREVEDMCQRLLCNPVIHDY 74 (82)
T ss_dssp EEEEEEEECTTSCCHHHHHHHHHHHHHTCC-CEEEEEEEEEEEEECCSCHHHHHHHHHHHHHHTTCCTTTEEE
T ss_pred EEEEEEEECCCCCCCHHHHHHHHHHHCCCC-CCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 999999979987282799999999975997-413798789999972799899999999999987088665789
|
| >d1t4aa_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurS-like superfamily: PurS-like family: PurS subunit of FGAM synthetase domain: PurS subunit of FGAM synthetase species: Bacillus subtilis [TaxId: 1423]
Probab=96.53 E-value=0.0094 Score=31.12 Aligned_cols=67 Identities=13% Similarity=0.090 Sum_probs=52.9
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCC--HHHHHHHHH-HCCCCCCCC
Q ss_conf 9999906987688465679999999099967818999999983278888--568989987-106653211
Q 000572 177 VIVEVGPRLSFTTAWSANAVSICRVCGLTEVTRLERSRRYLLFSKGALQ--DNQINDFAA-MVHDRMTEC 243 (1414)
Q Consensus 177 ~~i~V~pr~g~~~~~ss~a~~i~~~~gl~~v~rie~~~~y~i~~~~~~~--~~~~~~~~~-~l~d~mte~ 243 (1414)
..|.|.||+|+.||.+......++.+|...++.|..|+.|.+....+.. ....+.++. +|.|+.+|.
T Consensus 4 ~~V~V~lK~gVlDPqG~ai~~aL~~lG~~~v~~vr~GK~i~l~i~~~~~~a~~~v~~~c~~lLaNpvIE~ 73 (80)
T d1t4aa_ 4 VKVYVSLKESVLDPQGSAVQHALHSMTYNEVQDVRIGKYMELTIEKSDRDLDVLVKEMCEKLLANTVIED 73 (80)
T ss_dssp EEEEEEECTTSCCHHHHHHHHHHHHTTCTTEEEEEEEEEEEEEECCCSSCHHHHHHHHHHHTTCCTTTEE
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 9999997998728179999999986597666557888699999759849999999999998649755267
|