Citrus Sinensis ID: 000584

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------141
MASSDDEVEVGQKLVSDYYFEHEGERKQKEIISFSALPIQWNENERTGGCKELIYLRGAADSGLQKIFKPVIAWKFDLTNVIPEIFVLSKENSWIKLQKPRKCYEEIYRTILIMVHCLSYAKRNPEATAKSIWDFLSRFFCLYEVRPSQNDLVDHMDLIKEALERDDVLAKSKFLVTFLEEKPTKRKLSDEVVQTKAMSGFIVDDMEEDMVHDTEEDESNEEDELFDSVCSFCDNGGDLLCCEGRCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYKQHQCFACGKLGSSDKETGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLHKCCICKQGENKADSDLQFAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEGLLPNHRILIYCLKHEIDDEIGTPIRDHIIFPGIEENKTIIDRPRKKQSLASPSGKQKVASTKSSLTSKAPPQGKFSVKALKRVPSKAGQGETMEISERLLVGSDSSRRAKATDVSRKSFKGNVKSLSVQVDRSSSVDSKKTSLGERLYAAFVTEGTEQTKFGKQDNSDRETSRTVTVKPLRKKLISELPSLDEDSKRRLSSLMKDAASSVRMEEILKRHKIPSTHAYASKSAVDKAITLGKVEGSVEAIRTALKKLDVDGSSIEDAKAVCEPEVLSQIFKWKNKLKVYLAPFLHGMRYTSFGRHFTKVDKLQAIVDKLHWYVNDGDMIVDFCCGANDFSCLMKKKLDETGKNCLYKNYDILPAKNDFNFEKRDWMTVEPKELAPGSRLIMGLNPPFGVKAGLANKFINKALEFNPKLLILIVPPETERLDRKESAYELVWEDDQFLSGKSFYLPGSVDENDKQMDQWNMTAPPLYLWSRHDYAAHHKALAEKHGHISRPQSRTQMERNCYETHAVDHPKEEGQGDASMLIDLPLQINVTKELRNEAREDDKAGFPDNATEGGGESSHGHGDNQSGKTSRKRKRDRKKHGSGMRENSPLDGQNRGRHLASGIHGMSKHSPANIANVSPLLEGHSSKSIDMPSHVGSGDNDCQHFSNKGMPLSSPTIVIDGTSPLGVHSSKTIEMLSHDDGCQCDQMPHRSPVNVSSGILEGESSKPIEIPALSGIGDGGYEHFGVGMSHHSAATVIDGASSLQGLSSKSIEMPSYTQFDDNVHQHFEDKGVPRCSPAKVIAKSSLEDHSSKSIDIPSQTGFGSDYQHHEPTRSSSHIGTTYYGTQAGIPNDMGSYGMSSLNNGLSHGANLDERYTGYVRNTDSLGYRPSMSTDRELTMWPLARIYGQDFPAPTPGYGQMGSVPSNLYGNLGSSAEASYRMSTSAMDRYAPRLHQLNNTRMNTFRSEPFMPSRFGFYDSRAPQPGFFADMDFGPGFHPPFPQQGSGGWLDD
cccccccccccccccEEEEEEEccccccccEEEEEEccccccccccccccccEEEEEEcccccccEEEEEEEEEEEEcccccccEEEEEccccEEEccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHccccccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHccHHHcccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccHHHHHHHccccccHHHccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHccHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHHHHccccccccEEEEEcccccHHHHHHHHHHHHHcccccccccccccccccccccccccEEcccccccccccEEEEEcccccccHHHHHHHHHHHHcccccEEEEEcccccccccccccccEEEEcccccccccccccccccccccccccccccccccEEEccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHcHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccccccccccccHcccEEEEccccccccccEEEEEEEEEEcccccccccccEEEEEEcccccccEEEEEEEEEEEEccccccEEEEEEccccEEEEccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHcHHHHEEcccccEEEEccccccccccccccccccccHHcccccHcccccccEEccccccccEEEEEEcccccccccccccEEEEEcccccccccHHHHHHccccccccHHHHccHHHHcccccEcccEEEEEEccccccccccccEEEEEEcccHHcHHccccccEEcccccccHHHHHHHcccccccEEEEEccccccHHccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccHHHcccccccccccccccHccccccccHHHHHHHHHHcccccccccccccccccccccccEEcccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccccccccEEEcccHHHHHHHHHHHHHHHccccccHHHHHHHccHHHHHHHHHHHHHcHEEEcHHHccccccccccccccHHHHHHHHHHHcHEEccccEEEEEcccccHHHHHHHHHHHHHcccccEEcccccccccccccEccccEEEcHHHcccccEEEEEccccccHHHHHHHHHHHHHHHccccEEEEEcccccHHHcccccccEEEEEcccccccccEEcccccccccHHHHHHcccccccEEEcccHHHHHHHHHHHHcccccccccccEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccHHHHccccccccccccccccccccccccccccccccccccEccccccccccccEEEEccccccEEcccccccccEcccccccccccccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccHHHHccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
MASSDDEVEVGQKLVSDYYFEHEGERKQKEIISfsalpiqwnenertggckELIYLRgaadsglqkifkpviawkfdltnvipEIFVLSKenswiklqkprkcYEEIYRTILIMVHCLSyakrnpeatAKSIWDFLSRFFClyevrpsqndlVDHMDLIKEALERDDVLAKSKFLVTFLeekptkrklsDEVVQTKAMSgfivddmeedmvhdteedesneedelfDSVCsfcdnggdllccegrclrsfhatidageeshcaslglTKDEVEAMLNFFCKnceykqhqcfacgklgssdketgaevfpcvsatcghfyhphcvsklllrDDEVAADQLAKSIiagesftcplhkccickqgenkadsdlQFAVcrrcpkayhrkclprkiaFEDKLEEGIITRAwegllpnhRILIYCLKHeiddeigtpirdhiifpgieenktiidrprkkqslaspsgkqkvastkssltskappqgkfsVKALkrvpskagqgetmeISERllvgsdssrrakatdvsrksfkgnvKSLSVQVdrsssvdskktslGERLYAAFVTegteqtkfgkqdnsdretsrtvtvKPLRKKLIselpsldedSKRRLSSLMKDAASSVRMEEILKrhkipsthayaskSAVDKAITLGKVEGSVEAIRTALKKldvdgssiedakavcepeVLSQIFKWKNKLKVYLApflhgmrytsfgrhftkvDKLQAIVDKLHWYVNDGDMIvdfccgandfsclmkkkldetgknclyknydilpakndfnfekrdwmtvepkelapgsrlimglnppfgvkAGLANKFINKALefnpkllilivppeterldrkeSAYELVWeddqflsgksfylpgsvdendkqmdqwnmtapplylwsrHDYAAHHKALAEkhghisrpqsrtqmerncyethavdhpkeegqgdasmlidlplqINVTKELRNeareddkagfpdnategggesshghgdnqsgktsrkrkrdrkkhgsgmrenspldgqnrgrhlasgihgmskhspanianvsplleghssksidmpshvgsgdndcqhfsnkgmplssptividgtsplgvhssktiemlshddgcqcdqmphrspvnvssgilegesskpieipalsgigdggyehfgvgmshhsaatvidgasslqglssksiempsytqfddnvhqhfedkgvprcspakVIAKSsledhssksidipsqtgfgsdyqhheptrssshigttyygtqagipndmgsygmsslnnglshganlderytgyvrntdslgyrpsmstdreltmwplariygqdfpaptpgygqmgsvpsnlygnlgssaEASYRMSTSamdryaprlhqlnntrmntfrsepfmpsrfgfydsrapqpgffadmdfgpgfhppfpqqgsggwldd
massddevevgqKLVSDYYFEHEGERKQKEIISFSALPIQWNENERTGGCKELIYLRGAADSGLQKIFKPVIAWKFDLTNVIPEIFvlskenswiklqkprKCYEEIYRTILIMVHCLSYAKRNPEATAKSIWDFLSRFFCLYEVRPSQNDLVDHMDLIKEALERDDVLAKSKFLVtfleekptkrklsdevvqTKAMsgfivddmeeDMVHDTEEDESNEEDELFDSVCSFCDNGGDLLCCEGRCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYKQHQCFACGKLGSSDKETGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIiagesftcpLHKCCICKQGENKADSDLQFAVCRRcpkayhrkclprkiafeDKLEEGIItrawegllpNHRILIYCLKHEIDDEIGTPIRDHIifpgieenktiidrprkkqslaspsgkqkvastkssltskappqgkfsvkalkrvpskagqgetmeiserllvgsdssrrakatdvsrksfkgnvkslsvqvdrsssvdskktslgeRLYAAfvtegteqtkfgkqdnsdretsrtvtvkplrkkliselpsldedskrrLSSLMkdaassvrmeEILKrhkipsthayasksavdKAITLGKVEGSVEAIRTALkkldvdgssieDAKAVCEPEVLSQIFKWKNKLKVYLAPFLHGMRYTSFGRHFTKVDKLQAIVDKLHWYVNDGDMIVDFCCGANDFSCLMKKKLDETGKNCLYKNYDILPAKNDFNFEKRDWMTVEPKELAPGSRLIMGLNPPFGVKAGLANKFINKALEFNPKLLILIVPPETERLDRKESAYElvweddqflsGKSFYLPGSVDENDKQMDQWNMTAPPLYLWSRHDYAAHHKALAEKhghisrpqsrtQMERNCYETHAVDHPKEEGQGDASMLIDLPLQINVTKELRNEareddkagfpdnategggesshghgdnqsgktsrkrkrdrkkhgsgmrenspldgqnrGRHLASGIHGMSKHSPANIANVSPLLEGHSSKSIDMPSHVGSGDNDCQHFSNKGMPLSSPTIVIDGTSPLGVHSSKTIEMLSHDDGCQCDQMPHRSPVNVSSGILEGESSKPIEIPALSGIGDGGYEHFGVGMSHHSAATVIDGASSLQGLSSKSIEMPSYTQFDDNVHQHFEDKGVPRCSPAKVIAKssledhssksiDIPSQTGFGSDYQHHEPTRSSSHIGTTYYGTQAGIPNDMGSYGMSSLNNGLSHGANLDERYTGYVRntdslgyrpsmstdRELTMWPLARIYGQDFPAPTPGYGQMGSVPSNLYGNLGSSAEASYRMSTSAMDRYAPRLHQLNNTRMNTFRSEPFMPSRFGFYDSRAPQPGFFADMDFGPGFHppfpqqgsggwldd
MASSDDEVEVGQKLVSDYYFEHEGERKQKEIISFSALPIQWNENERTGGCKELIYLRGAADSGLQKIFKPVIAWKFDLTNVIPEIFVLSKENSWIKLQKPRKCYEEIYRTILIMVHCLSYAKRNPEATAKSIWDFLSRFFCLYEVRPSQNDLVDHMDLIKEALERDDVLAKSKFLVTFLEEKPTKRKLSDEVVQTKAMSGFIVDDMEEDMVHdteedesneedelfdSVCSFCDNGGDLLCCEGRCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYKQHQCFACGKLGSSDKETGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLHKCCICKQGENKADSDLQFAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEGLLPNHRILIYCLKHEIDDEIGTPIRDHIIFPGIEENKTIIDRPRKKQSLASPSGKQKVASTKSSLTSKAPPQGKFSVKALKRVPSKAGQGETMEISERLLVGSDSSRRAKATDVSRKSFKGNVkslsvqvdrsssvdskktsLGERLYAAFVTEGTEQTKFGKQDNSDRETSRTVTVKPLRKKLISELPSLDEDSKRRLSSLMKDAASSVRMEEILKRHKIPSTHAYASKSAVDKAITLGKVEGSVEAIRTALKKLDVDGSSIEDAKAVCEPEVLSQIFKWKNKLKVYLAPFLHGMRYTSFGRHFTKVDKLQAIVDKLHWYVNDGDMIVDFCCGANDFSCLMKKKLDETGKNCLYKNYDILPAKNDFNFEKRDWMTVEPKELAPGSRLIMGLNPPFGVKAGLANKFINKALEFNPKLLILIVPPETERLDRKESAYELVWEDDQFLSGKSFYLPGSVDENDKQMDQWNMTAPPLYLWSRHDYAAHHKALAEKHGHISRPQSRTQMERNCYETHAVDHPKEEGQGDASMLIDLPLQINVTKELRNEAREDDKAGFPDNATegggesshghgDNQSGKTSrkrkrdrkkHGSGMRENSPLDGQNRGRHLASGIHGMSKHSPANIANVSPLLEGHSSKSIDMPSHVGSGDNDCQHFSNKGMPLSSPTIVIDGTSPLGVHSSKTIEMLSHDDGCQCDQMPHRSPVNVSSGILEGESSKPIEIPALSGIGDGGYEHFGVGMSHHSAATVIDGASSLQGLSSKSIEMPSYTQFDDNVHQHFEDKGVPRCSPAKVIAKSSLEDHSSKSIDIPSQTGFGSDYQHHEPTRSSSHIGTTYYGTQAGIPNDMGSYGMSSLNNGLSHGANLDERYTGYVRNTDSLGYRPSMSTDRELTMWPLARIYGQDFPAPTPGYGQMGSVPSNLYGNLGSSAEASYRMSTSAMDRYAPRLHQLNNTRMNTFRSEPFMPSRFGFYDSRAPQPGFFADMDfgpgfhppfpqqgsggWLDD
*************LVSDYYFEHEGERKQKEIISFSALPIQWNENERTGGCKELIYLRGAADSGLQKIFKPVIAWKFDLTNVIPEIFVLSKENSWIKLQKPRKCYEEIYRTILIMVHCLSYAKRNPEATAKSIWDFLSRFFCLYEVRPSQNDLVDHMDLIKEALERDDVLAKSKFLVTFLE********************FI**********************LFDSVCSFCDNGGDLLCCEGRCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYKQHQCFACGKLGSSDKETGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLHKCCICKQGENKADSDLQFAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEGLLPNHRILIYCLKHEIDDEIGTPIRDHIIFPGIEENKTI************************************************************************************************************YAAFV*******************************************************************************AVDKAITLGKVEGSVEAIRTALKKLDVDGSSIEDAKAVCEPEVLSQIFKWKNKLKVYLAPFLHGMRYTSFGRHFTKVDKLQAIVDKLHWYVNDGDMIVDFCCGANDFSCLMKKKLDETGKNCLYKNYDILPAKNDFNFEKRDWMTVEPKELAPGSRLIMGLNPPFGVKAGLANKFINKALEFNPKLLILIVPPETERLDRKESAYELVWEDDQFLSGKSFYLPGSV******MDQWNMTAPPLYLWSRHDYAAHHKAL****************************************IDLPLQI***************************************************************************************************************************************************************************************ALSGIGDGGYEHFGVGMSHHSAATVI************************************************************************************YYG*************************NLDERYTGYVRNTDSLGY*******RELTMWPLARIYGQDFPA*************************************************************FGFY********FFAD**********************
******EVEVGQKLVSDYYFEHEGERKQKEIISFSALPIQWNENERTGGCKELIYLRGAADSGLQKIFKPVIAWKFDLTNVIPEIFVLSKENSWIKLQKPRKCYEEIYRTILIMVHCLSYAKRN*********DFLSRFF*************************************************************************************FDSVCSFCDNGGDLLCCEGRCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYKQHQCFACGKLGS***ETGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLHKCCICKQGENKADSDLQFAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEGLLPNHRILIYCLKHEIDDE******************************************************************************************************************************************************************************************************************************VEGSVEAIRTALKKLDVD*SSIEDAKAVCEPEVLSQIFKWKNKLKVYLAPFLHGMRYTSFGRHFTKVDKLQAIVDKLHWYVNDGDMIVDFCCGANDFSCLMKKKLDETGKNCLYKNYDILPAKNDFNFEKRDWMTVEPKELAPGSRLIMGLNPPFGVKAGLANKFINKALEFNPKLLILIVPPETERLDRKESAYELVWEDDQFLSGKSFYLPGSVDENDKQMDQWNMTAPPLYLWSRHDYAAHHKAL******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
**********GQKLVSDYYFEHEGERKQKEIISFSALPIQWNENERTGGCKELIYLRGAADSGLQKIFKPVIAWKFDLTNVIPEIFVLSKENSWIKLQKPRKCYEEIYRTILIMVHCLSYAKRNPEATAKSIWDFLSRFFCLYEVRPSQNDLVDHMDLIKEALERDDVLAKSKFLVTFLEEKPTKRKLSDEVVQTKAMSGFIVDDMEEDM**************LFDSVCSFCDNGGDLLCCEGRCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYKQHQCFACGKLGSSDKETGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLHKCCICKQGENKADSDLQFAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEGLLPNHRILIYCLKHEIDDEIGTPIRDHIIFPGIEENKTIIDR******************************GKFSVKALKRVPSKAGQGETMEISERLLVGS************RKSFKGNV*****************TSLGERLYAAFVTEGT********************VKPLRKKLISELPSLDEDSKRRLSSLMKDAASSVRMEEILKRHKIPSTHAYASKSAVDKAITLGKVEGSVEAIRTALKKLDVDGSSIEDAKAVCEPEVLSQIFKWKNKLKVYLAPFLHGMRYTSFGRHFTKVDKLQAIVDKLHWYVNDGDMIVDFCCGANDFSCLMKKKLDETGKNCLYKNYDILPAKNDFNFEKRDWMTVEPKELAPGSRLIMGLNPPFGVKAGLANKFINKALEFNPKLLILIVPPETERLDRKESAYELVWEDDQFLSGKSFYLPGSVDENDKQMDQWNMTAPPLYLWSRHDYAAHHKALAEKHGHISRPQSRTQMERNCYETHAVDHPKEEGQGDASMLIDLPLQINVTKELRNEAREDDKAGFPDN**************************************SPLDGQNRGRHLASGIHGMSKHSPANIANVSPLLEGHSSKSIDMPSHVGSGDNDCQHFSNKGMPLSSPTIVIDGTSPLGVHSSKTIEMLSHDDGCQCDQMPHRSPVNVSSGILEGESSKPIEIPALSGIGDGGYEHFGVGMSHHSAATVIDGASSLQGLSSKSIEMPSYTQFDDNVHQHFEDKGVPRCSPAKVIAKSSLEDHSSKSIDIPSQTGFGSDYQHHEPTRSSSHIGTTYYGTQAGIPNDMGSYGMSSLNNGLSHGANLDERYTGYVRNTDSLGYRPSMSTDRELTMWPLARIYGQDFPAPTPGYGQMGSVPSNLYGNLGSSAEASYRMSTSAMDRYAPRLHQLNNTRMNTFRSEPFMPSRFGFYDSRAPQPGFFADMDFGPGFHPPFPQ*********
*********VGQKLVSDYYFEHEGERKQKEIISFSALPIQWNENERTGGCKELIYLRGAADSGLQKIFKPVIAWKFDLTNVIPEIFVLSKENSWIKLQKPRKCYEEIYRTILIMVHCLSYAKRNPEATAKSIWDFLSRFFCLYEVRPSQNDLVDHMDLIKEALERDDVLAKSKFLVTFLEE****************************************EDELFDSVCSFCDNGGDLLCCEGRCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYKQHQCFACGKLGSSD*ETGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLHKCCICKQGENKADSDLQFAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEGLLPNHRILIYCLKHEIDDEIGTPIRDHIIFPGIEE********************************************************************************************************KTSLGERLYAAFVTEG******************TVTVKPLRKKLISELPSLDEDSKRRLSSLMKDAASSVRMEEILKRHKIPSTHAYASKSAVDKAITLGKVEGSVEAIRTALKKLDVDGSSIEDAKAVCEPEVLSQIFKWKNKLKVYLAPFLHGMRYTSFGRHFTKVDKLQAIVDKLHWYVNDGDMIVDFCCGANDFSCLMKKKLDETGKNCLYKNYDILPAKNDFNFEKRDWMTVEPKELAPGSRLIMGLNPPFGVKAGLANKFINKALEFNPKLLILIVPPETERLDRKESAYELVWEDDQFLSGKSFYLPGSVDENDKQMDQWNMTAPPLYLWSRHDYAAHHKALAEKHGHISRPQSRTQMERNCYETHAVD********DASMLIDLPLQINVTKELRNEAR***********************************************************************************************************************IDGTSPLGVHSSKTIEMLSHDDGCQCDQMPHRSPVNVSSGILEGESSKPIEIPALSGIGDGGYEHFGVGMSHHSAATVIDGASSLQGLSSKSIEMPSYTQFDDNVHQHFEDKGVPRCSPAKVIAKSSL**************GF*S*YQHHEPTRSSSHIGTTYYGTQAGIPNDMGSYGMSSLNNGLSHGANLDERYTGYVRNTDSLGYRPSMSTDRELTMWPLARIYGQDFPAPTPGYGQMGSVPSNLYGNLGSSAEASYRMSTSAMDRYAPRLHQLNNTRMNTFRSEPFMPSRFGFYDSRAPQPGFFADMDFGPGFHPPF***********
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASSDDEVEVGQKLVSDYYFEHEGERKQKEIISFSALPIQWNENERTGGCKELIYLRGAADSGLQKIFKPVIAWKFDLTNVIPEIFVLSKENSWIKLQKPRKCYEEIYRTILIMVHCLSYAKRNPEATAKSIWDFLSRFFCLYEVRPSQNDLVDHMDLIKEALERDDVLAKSKFLVTFLEEKPTKRKLSDEVVQTKAMSGFIVDDMEEDMVHDTEEDESNEEDELFDSVCSFCDNGGDLLCCEGRCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYKQHQCFACGKLGSSDKETGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLHKCCICKQGENKADSDLQFAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEGLLPNHRILIYCLKHEIDDEIGTPIRDHIIFPGIEENKTIIDRPRKKQSLASPSGKQKVASTKSSLTSKAPPQGKFSVKALKRVPSKAGQGETMEISERLLVGSDSSRRAKATDVSRKSFKGNVKSLSVQVDRSSSVDSKKTSLGERLYAAFVTEGTEQTKFGKQDNSDRETSRTVTVKPLRKKLISELPSLDEDSKRRLSSLMKDAASSVRMEEILKRHKIPSTHAYASKSAVDKAITLGKVEGSVEAIRTALKKLDVDGSSIEDAKAVCEPEVLSQIFKWKNKLKVYLAPFLHGMRYTSFGRHFTKVDKLQAIVDKLHWYVNDGDMIVDFCCGANDFSCLMKKKLDETGKNCLYKNYDILPAKNDFNFEKRDWMTVEPKELAPGSRLIMGLNPPFGVKAGLANKFINKALEFNPKLLILIVPPETERLDRKESAYELVWEDDQFLSGKSFYLPGSVDENDKQMDQWNMTAPPLYLWSRHDYAAHHKALAEKHGHISRPQSRTQMERNCYETHAVDHPKEEGQGDASMLIDLPLQINVTKELRNEAREDDKAGFPDNATEGGGESSHGHGDNQSGKTSRKRKRDRKKHGSGMRENSPLDGQNRGRHLASGIHGMSKHSPANIANVSPLLEGHSSKSIDMPSHVGSGDNDCQHFSNKGMPLSSPTIVIDGTSPLGVHSSKTIEMLSHDDGCQCDQMPHRSPVNVSSGILEGESSKPIEIPALSGIGDGGYEHFGVGMSHHSAATVIDGASSLQGLSSKSIEMPSYTQFDDNVHQHFEDKGVPRCSPAKVIAKSSLEDHSSKSIDIPSQTGFGSDYQHHEPTRSSSHIGTTYYGTQAGIPNDMGSYGMSSLNNGLSHGANLDERYTGYVRNTDSLGYRPSMSTDRELTMWPLARIYGQDFPAPTPGYGQMGSVPSNLYGNLGSSAEASYRMSTSAMDRYAPRLHQLNNTRMNTFRSEPFMPSRFGFYDSRAPQPGFFADMDFGPGFHPPFPQQGSGGWLDD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1407 2.2.26 [Sep-21-2011]
Q55FD6688 PHD finger-containing pro yes no 0.120 0.245 0.317 3e-17
Q6P2L61439 Histone-lysine N-methyltr yes no 0.088 0.086 0.339 5e-14
O884912588 Histone-lysine N-methyltr no no 0.090 0.049 0.310 8e-14
Q96L732696 Histone-lysine N-methyltr yes no 0.090 0.047 0.310 1e-13
Q8BVE81365 Histone-lysine N-methyltr no no 0.087 0.090 0.343 2e-13
O960281365 Histone-lysine N-methyltr no no 0.087 0.090 0.337 2e-13
Q9BZ951437 Histone-lysine N-methyltr no no 0.088 0.086 0.320 6e-13
>sp|Q55FD6|Y8158_DICDI PHD finger-containing protein DDB_G0268158 OS=Dictyostelium discoideum GN=DDB_G0268158 PE=4 SV=1 Back     alignment and function desciption
 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 23/192 (11%)

Query: 212 HDTEEDESNEEDELFDSVCSFCDNGGDLLCCEGRCLRSFH-ATIDAGEESHCASLGLTK- 269
           ++T +D+  +     ++VC+FC+  G+LL C+G CLRSFH + + A    + +S  ++  
Sbjct: 121 NETNDDDKPKRPRKNEAVCTFCEKPGELLMCDGLCLRSFHISCLKARNLYNPSSSSISPV 180

Query: 270 DEVEAMLNFFCKNCEYKQHQCFACGKLGSSDKETGAEVFPCVSATCGHFYHPHCVSKLLL 329
             ++  + + C +C   Q+ CF+C K G      G ++  C    CG FYH  C      
Sbjct: 181 TTIDGTVRWECNDCVSSQNSCFSCKKRGI----IGIDLMKCKVHQCGKFYHYKC------ 230

Query: 330 RDDEVAADQLAKSI-IAGESFTCPLHKCCICK-QGENKADSDLQFAVCRRCPKAYHRKCL 387
               VA  +LAK I      F CPLH C +C+  G+ K     Q   C RCP AYH  C+
Sbjct: 231 ----VADYKLAKLINTKTPRFNCPLHYCSVCEVSGDGK-----QSVHCFRCPTAYHVICM 281

Query: 388 PRKIAFEDKLEE 399
              +    K  E
Sbjct: 282 QPGVKMLTKTRE 293

Dictyostelium discoideum (taxid: 44689)
>sp|Q6P2L6|NSD3_MOUSE Histone-lysine N-methyltransferase NSD3 OS=Mus musculus GN=Whsc1l1 PE=1 SV=2 Back     alignment and function description
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific OS=Mus musculus GN=Nsd1 PE=1 SV=1 Back     alignment and function description
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific OS=Homo sapiens GN=NSD1 PE=1 SV=1 Back     alignment and function description
>sp|Q8BVE8|NSD2_MOUSE Histone-lysine N-methyltransferase NSD2 OS=Mus musculus GN=Whsc1 PE=1 SV=2 Back     alignment and function description
>sp|O96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1 PE=1 SV=1 Back     alignment and function description
>sp|Q9BZ95|NSD3_HUMAN Histone-lysine N-methyltransferase NSD3 OS=Homo sapiens GN=WHSC1L1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1407
3594941021260 PREDICTED: uncharacterized protein LOC10 0.786 0.878 0.547 0.0
147814981 2238 hypothetical protein VITISV_020586 [Viti 0.786 0.494 0.549 0.0
2555762621249 protein binding protein, putative [Ricin 0.737 0.831 0.571 0.0
2977375141201 unnamed protein product [Vitis vinifera] 0.746 0.875 0.528 0.0
3565697001225 PREDICTED: uncharacterized protein LOC10 0.692 0.795 0.533 0.0
3574598291289 hypothetical protein MTR_3g055370 [Medic 0.684 0.747 0.517 0.0
1453592801297 enhanced downy mildew 2 [Arabidopsis tha 0.645 0.700 0.539 0.0
2977964191294 hypothetical protein ARALYDRAFT_495622 [ 0.647 0.704 0.536 0.0
2254469891216 PREDICTED: uncharacterized protein LOC10 0.644 0.745 0.524 0.0
97581711332 unnamed protein product [Arabidopsis tha 0.645 0.681 0.520 0.0
>gi|359494102|ref|XP_002276879.2| PREDICTED: uncharacterized protein LOC100243584 [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1182 bits (3059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1153 (54%), Positives = 794/1153 (68%), Gaps = 46/1153 (3%)

Query: 1    MASSDDEVEVGQKLVSDYYFEHEGERKQKEIISFSALPIQWNENERTGGCKELIYLRGAA 60
            MASSDDE E     VS+Y+F  +    + E ISFS LPIQW++ +     KE I+L G A
Sbjct: 1    MASSDDEGETLPGSVSNYHFVDD----KGEPISFSVLPIQWSKGDNLDSKKEPIFLDGNA 56

Query: 61   DSGLQKIFKPVIAWKFDLTNVIPEIFVLSKENSWIKLQKPRKCYEEIYRTILIMVHCLSY 120
            D+GLQKI+K VIAWKFDL++V PEI VLSKEN+WIKLQKPRK +E+I R+ILI V CL  
Sbjct: 57   DNGLQKIYKQVIAWKFDLSDVNPEISVLSKENNWIKLQKPRKSFEDIIRSILITVWCLHS 116

Query: 121  AKRNPEATAKSIWDFLSRFFCLYEVRPSQNDLVDHMDLIKEALERDDVLAKSKFLVTFLE 180
             K+NPE + KS+WD LSR F LY+VRPS+NDLVDH  LI EA++RD+ LAKSKFL+TFLE
Sbjct: 117  MKKNPETSGKSLWDHLSRVFSLYDVRPSENDLVDHTTLISEAVKRDEGLAKSKFLLTFLE 176

Query: 181  EKPTKRKLSDEVVQTKAMSGFIVDDMEEDMVHDTEEDESNEEDELFDSVCSFCDNGGDLL 240
            EKP KRK  ++ V T +  GFIVD M+ED + +T E  S+EE++LFDSVCS CDNGGDLL
Sbjct: 177  EKPRKRKSFEQDVPTTSKPGFIVDYMDEDGISETGEVGSDEEEDLFDSVCSMCDNGGDLL 236

Query: 241  CCEGRCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYKQHQCFACGKLGSSD 300
            CCEGRC+RSFHAT +AGEES CA+LG++  +VEAM NF+CKNC+YKQHQCF+CGKLGSSD
Sbjct: 237  CCEGRCMRSFHATKEAGEESLCATLGMSVAQVEAMQNFYCKNCKYKQHQCFSCGKLGSSD 296

Query: 301  KETGAEVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLHKCCICK 360
            K +GAEVF C +ATCG FYHP CV+KLL R+DE AA++L K+I AGE F CP+H+C +CK
Sbjct: 297  KSSGAEVFLCANATCGRFYHPQCVAKLLHREDEAAAEELQKNIYAGELFACPIHRCHVCK 356

Query: 361  QGENKADSDLQFAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEGLLPNHRILIYCL 420
            QGE+K D +LQFA+CRRCPK+YHRKCLPRKI+FED  EEGII RAW+GLLPN RILIYCL
Sbjct: 357  QGEDKKDLELQFAICRRCPKSYHRKCLPRKISFEDLDEEGIIQRAWDGLLPN-RILIYCL 415

Query: 421  KHEIDDEIGTPIRDHIIFPGIEENKTIIDRPRKKQSLASPSGKQKVASTKSSLTSKAPPQ 480
            KHEID+ +GTPIRDHI FP  EE        R+ +  +S     KV S K SL S+  P+
Sbjct: 416  KHEIDELLGTPIRDHIKFPNDEEKM----EKRRSELFSSRKDLDKVVSKKRSLVSEDSPR 471

Query: 481  GKFSVKALKRV---PSKAGQGETMEISERLLVGSDSSRRAKATDVSRKSFKGNVKSLSVQ 537
             + +VKA K+V    S    G++ + SE+   G D S+R K T  S+KS   NVKS+S +
Sbjct: 472  ERMAVKATKQVEKLSSTVKDGDSTKKSEKRSSGPDPSKRLKVTGFSKKSLDDNVKSISKK 531

Query: 538  VDRSSSVDSKKTSLGERLYAAFVTEGTEQTKFGKQDNSDRETSRTVTVKPLRKKLISELP 597
            VD+SS  D  KTSLGE+LYA        +++  K+D  + E  + V      KK  S LP
Sbjct: 532  VDKSSMADENKTSLGEQLYALI----KNRSEPRKEDTPNSELEQKVVT----KKTSSSLP 583

Query: 598  SLDEDSKRRLSSLMKDAASSVRMEEILKRHKIPSTHAYASKSAVDKAITLGKVEGSVEAI 657
            SLD DS+ R+ +++K++ S + +E+++K+HK+PSTHAY+SK+ VD+ IT GKVEGS+EA+
Sbjct: 584  SLDRDSENRILAIIKESKSLITLEDVMKKHKVPSTHAYSSKNTVDRTITQGKVEGSIEAL 643

Query: 658  RTALKKLDVDGSSIEDAKAVCEPEVLSQIFKWKNKLKVYLAPFLHGMRYTSFGRHFTKVD 717
            R ALKKL+  G SIEDAKAVCEPEVL+QI KWKNKLKVYLAPFLHGMRYTSFGRHFTKVD
Sbjct: 644  RAALKKLE-GGGSIEDAKAVCEPEVLNQIVKWKNKLKVYLAPFLHGMRYTSFGRHFTKVD 702

Query: 718  KLQAIVDKLHWYVNDGDMIVDFCCGANDFSCLMKKKLDETGKNCLYKNYDILPAKNDFNF 777
            KL+ IV+KLH+YV +GD IVDFCCGANDFSCLMK+KL+E GK C YKNYD++  KNDFNF
Sbjct: 703  KLKEIVEKLHYYVKNGDTIVDFCCGANDFSCLMKQKLEEMGKKCSYKNYDVIQPKNDFNF 762

Query: 778  EKRDWMTVEPKELAPGSRLIMGLNPPFGVKAGLANKFINKALEFNPKLLILIVPPETERL 837
            EKRDWM+V+ KEL  GS+LIMGLNPPFGVKA LAN FINKAL+F PKLLILIVPPETERL
Sbjct: 763  EKRDWMSVKQKELPTGSQLIMGLNPPFGVKASLANMFINKALQFKPKLLILIVPPETERL 822

Query: 838  DRKESAYELVWEDDQFLSGKSFYLPGSVDENDKQMDQWNMTAPPLYLWSRHDYAAHHKAL 897
            D+K   Y+L+WEDD  LSGKSFYLPGSVD NDKQ++QWN+  P LYLWSR D+   H+A+
Sbjct: 823  DKKRPPYDLIWEDDNELSGKSFYLPGSVDVNDKQIEQWNVNPPLLYLWSRQDWTTKHRAI 882

Query: 898  AEKHGHISRPQSRTQMERNCYETHAVDHP--KEEGQGDASMLIDLPLQINVTKELRNEAR 955
            A+K GH+SR +  + +E+   E   +DHP   +   G  SM++D         E   E  
Sbjct: 883  AQKCGHVSRRRRVSHLEKIQNEEPVLDHPMADQTHSGHVSMMLD---------EHSVENH 933

Query: 956  EDDKAGFPDNATEGGGESS-HGHGDNQSGKTSRKRKRDRKKHGSG---MRENSPLDGQNR 1011
            E +     +  T G  ESS H   D +        +  +++HG G    R  +  D +  
Sbjct: 934  ELEHEERREIVTAGRVESSPHSGVDREDHGKKLLNENSKQRHGKGKHEKRTENISDDKQI 993

Query: 1012 GRHLASGIHGMSKHSPANIANVSPLLEGHSSKSIDMPSHVGSGDNDCQHFSNKGMPLSSP 1071
               ++    G S  S    ++    ++ H  +++   S V  G+    HF   G+P SS 
Sbjct: 994  MTPVSEMCKGTSCTSSPRASDARSTVDIHQPEALKKSSPVEVGEEVYPHF-QPGVPDSS- 1051

Query: 1072 TIVIDGTSPLGVHSSKTIEMLSH---DDGCQCDQMPHRSPVNVSSGILEG--ESSKPIEI 1126
               +  T   G H+S   +M      D         HR    VS G+  G   S +P   
Sbjct: 1052 ---LQRTGYGGSHASIPEDMARRYRLDSEEPFSSTIHRWSTGVSPGLDYGIRNSEEPFTS 1108

Query: 1127 PALSGIGDGGYEH 1139
                 I + GY H
Sbjct: 1109 YMRGSIDNLGYRH 1121

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147814981|emb|CAN61366.1| hypothetical protein VITISV_020586 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255576262|ref|XP_002529024.1| protein binding protein, putative [Ricinus communis] gi|223531504|gb|EEF33335.1| protein binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297737514|emb|CBI26715.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356569700|ref|XP_003553034.1| PREDICTED: uncharacterized protein LOC100803073 [Glycine max] Back     alignment and taxonomy information
>gi|357459829|ref|XP_003600195.1| hypothetical protein MTR_3g055370 [Medicago truncatula] gi|355489243|gb|AES70446.1| hypothetical protein MTR_3g055370 [Medicago truncatula] Back     alignment and taxonomy information
>gi|145359280|ref|NP_200350.2| enhanced downy mildew 2 [Arabidopsis thaliana] gi|334188424|ref|NP_001190545.1| enhanced downy mildew 2 [Arabidopsis thaliana] gi|332009240|gb|AED96623.1| enhanced downy mildew 2 [Arabidopsis thaliana] gi|332009241|gb|AED96624.1| enhanced downy mildew 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297796419|ref|XP_002866094.1| hypothetical protein ARALYDRAFT_495622 [Arabidopsis lyrata subsp. lyrata] gi|297311929|gb|EFH42353.1| hypothetical protein ARALYDRAFT_495622 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225446989|ref|XP_002268363.1| PREDICTED: uncharacterized protein LOC100248222 [Vitis vinifera] Back     alignment and taxonomy information
>gi|9758171|dbj|BAB08556.1| unnamed protein product [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1407
TAIR|locus:21738571297 EDM2 "ENHANCED DOWNY MILDEW 2" 0.650 0.705 0.533 1.4e-262
TAIR|locus:2162667677 ELP1 "EDM2-like protein1" [Ara 0.235 0.488 0.521 2e-143
DICTYBASE|DDB_G0268158688 DDB_G0268158 "PHD zinc finger- 0.108 0.222 0.329 1.1e-14
UNIPROTKB|J9NUG71359 WHSC1 "Uncharacterized protein 0.071 0.074 0.344 1.1e-06
UNIPROTKB|F1PK461362 WHSC1 "Uncharacterized protein 0.071 0.074 0.344 1.1e-06
UNIPROTKB|F1S8S01361 WHSC1 "Uncharacterized protein 0.071 0.074 0.344 1.4e-06
MGI|MGI:12765741365 Whsc1 "Wolf-Hirschhorn syndrom 0.071 0.073 0.352 1.4e-06
UNIPROTKB|F1MMY41368 WHSC1 "Uncharacterized protein 0.071 0.073 0.336 2.9e-06
ZFIN|ZDB-GENE-080519-21873 nsd1b "nuclear receptor bindin 0.065 0.049 0.339 6.8e-06
UNIPROTKB|D4A3R41439 Whsc1l1 "Protein Whsc1l1" [Rat 0.061 0.059 0.342 1.1e-05
TAIR|locus:2173857 EDM2 "ENHANCED DOWNY MILDEW 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2492 (882.3 bits), Expect = 1.4e-262, Sum P(2) = 1.4e-262
 Identities = 511/958 (53%), Positives = 651/958 (67%)

Query:     5 DDEVE---VGQKLVSDYYFEHEGERKQKEIISFSALPIQWNENERTGGCKELIYLRGAAD 61
             DDE E   V Q   S+YYFE +     KE +SF+ LPIQW+  E+  G     YLRG +D
Sbjct:     6 DDEEEDFSVPQS-ASNYYFEDD----DKEPVSFARLPIQWSVEEKVDGSGLGFYLRGRSD 60

Query:    62 SGLQKIFKPVIAWKFDLTNVIPEIFVLSKENSWIKLQKPRKCYEEIYRTILIMVHCLSYA 121
             +GL  + K V AW++DL+N  PEI VL+K+N WIKL++PRK Y E+ RT+L+ +H + + 
Sbjct:    61 NGLLPLHKLVKAWRYDLSNFQPEISVLTKDNIWIKLEEPRKSYGELIRTVLVTLHSIQFL 120

Query:   122 KRNPEATAKSIWDFLSRFFCLYEVRPSQNDLVDHMDLIKEALERDDVLAKSKFLVTFLEE 181
             +RNP+A+ K++W+ L+R    Y+V+PSQNDLVDH+ LI EA +RD  LA SKF++ FL +
Sbjct:   121 RRNPQASEKALWEKLTRSLRSYDVKPSQNDLVDHIGLIAEAAKRDRNLANSKFILAFLTK 180

Query:   182 KPTKRKLSDEVVQTKAMSGFIVDDMEEDMVHXXXXXXXXXXXXXXXSVCSFCDNGGDLLC 241
             KPTKR+L DE     A   FIV D E+  V                SVC+ CDNGG++LC
Sbjct:   181 KPTKRRLPDE---DNAKDDFIVGD-EDTYVASDEDELDDEDDDFFESVCAICDNGGEILC 236

Query:   242 CEGRCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYKQHQCFACGKLGSSDK 301
             CEG CLRSFHAT   GE+S C SLG  K +VEA+  +FC NCE+K HQCF C  LGSSD 
Sbjct:   237 CEGSCLRSFHATKKDGEDSLCDSLGFNKMQVEAIQKYFCPNCEHKIHQCFICKNLGSSDN 296

Query:   302 ETGA-EVFPCVSATCGHFYHPHCVSKLLLRDDEVAADQLAKSIIAGESFTCPLHKCCICK 360
              +GA EVF CVSATCG+FYHPHCV++ L   ++  ++ L + IIAGE +TCPLHKC +C+
Sbjct:   297 SSGAAEVFQCVSATCGYFYHPHCVTRRLRLGNKEESEALERQIIAGE-YTCPLHKCSVCE 355

Query:   361 QGENKADSDLQFAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEGLLPNHRILIYCL 420
              GE K DS+LQFAVCRRCPK+YHRKCLPR+I+FED  +E I+TRAW+GLL N R+LIYC 
Sbjct:   356 NGEVKTDSNLQFAVCRRCPKSYHRKCLPREISFEDIEDEDILTRAWDGLLHN-RVLIYCQ 414

Query:   421 KHEIDDEIGTPIRDHIIFPGIEENKTIIDRPRKKQSLASPSGKQKVASTKSSLTSKAPPQ 480
             +HEID+E+ TP+RDH+ FP  EE K  +   R+   L S  G+ K A  K    +     
Sbjct:   415 EHEIDEELLTPVRDHVKFPFTEEQKVFVKEQRR--ILESHVGRDK-ARLKVKDPALQDTC 471

Query:   481 GKFSVKALKRVPSKAGQGETMEISERLLVGS--DSSRRAKATD-------VSRKSFK--- 528
             GK S  + +     +  G      +  LV S  D SR+ K  D       V +KS K   
Sbjct:   472 GKASKNSFRSSFPSSKDG--FSTKKHGLVSSVPDHSRKRKDIDPSIKHKMVPQKSQKMME 529

Query:   529 --GNVXXXXXXXXXXXXXXXXXXXLGERLYAAFVTEGTEQTKFGKQDNSDRETSRTVTVK 586
                                     LGERL++   T+     K G+    D + ++T ++ 
Sbjct:   530 DSREAGKNKLGVKEARDAGKSKISLGERLFS--YTQEPNPVKPGRVIPVDSKHNKTDSIA 587

Query:   587 PLRKKLISELPSLDEDSKRRLSSLMKDAASSVRMEEILKRHKIPSTHA-YASKSAVDKAI 645
                K+  SE+P+LD DS+RRL ++MK A   + M  ILK+ KI ST + +++++ VDK I
Sbjct:   588 S--KEPGSEIPTLDNDSQRRLLAVMKKATEEITMGTILKKFKIQSTMSTHSTRNVVDKTI 645

Query:   646 TLGKVEGSVEAIRTALKKLDVDGSSIEDAKAVCEPEVLSQIFKWKNKLKVYLAPFLHGMR 705
             T+GKVEGSV+AIRTALKKL+ +G +IEDAKAVCEPEVLSQI KWK+KLKVYLAPFLHG R
Sbjct:   646 TMGKVEGSVQAIRTALKKLE-EGGNIEDAKAVCEPEVLSQILKWKDKLKVYLAPFLHGAR 704

Query:   706 YTSFGRHFTKVDKLQAIVDKLHWYVNDGDMIVDFCCGANDFSCLMKKKLDETGKNCLYKN 765
             YTSFGRHFT  +KLQ IVD+LHWY +DGDMIVDFCCG+NDFSCLM  KL+ETGK CLYKN
Sbjct:   705 YTSFGRHFTNPEKLQQIVDRLHWYADDGDMIVDFCCGSNDFSCLMNAKLEETGKKCLYKN 764

Query:   766 YDILPAKNDFNFEKRDWMTVEPKELAPGSRLIMGLNPPFGVKAGLANKFINKALEFNPKL 825
             YD+ PAKN+FNFE++DWMTV   EL PGS+LIMGLNPPFGV A LANKFI KALEF PK+
Sbjct:   765 YDLFPAKNNFNFERKDWMTVSKDELEPGSKLIMGLNPPFGVNASLANKFITKALEFRPKI 824

Query:   826 LILIVPPETERLDRKESAYELVWEDDQFLSGKSFYLPGSVDENDKQMDQWNMTAPPLYLW 885
             LILIVPPETERLD+K+S+Y L+WED  FLSG SFYLPGSV+E DKQ++ WN+  PPL LW
Sbjct:   825 LILIVPPETERLDKKKSSYVLIWEDKTFLSGNSFYLPGSVNEEDKQLEDWNLVPPPLSLW 884

Query:   886 SRHDYAAHHKALAEKHGHISRPQSRTQMERNCYETHAVDHPKEEGQGDASMLIDLPLQ 943
             SR D+AA HK +AEKH H+SR    ++++    E +A  HP   G  D  M  D+P++
Sbjct:   885 SRSDFAAKHKKIAEKHCHLSRDVGSSKLKIVEEEANASLHPL--GASDG-MCDDIPME 939
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS
GO:0007165 "signal transduction" evidence=IMP
GO:0050832 "defense response to fungus" evidence=IMP
GO:0009911 "positive regulation of flower development" evidence=IMP
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP
TAIR|locus:2162667 ELP1 "EDM2-like protein1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0268158 DDB_G0268158 "PHD zinc finger-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|J9NUG7 WHSC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1PK46 WHSC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1S8S0 WHSC1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1276574 Whsc1 "Wolf-Hirschhorn syndrome candidate 1 (human)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1MMY4 WHSC1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-080519-2 nsd1b "nuclear receptor binding SET domain protein 1b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|D4A3R4 Whsc1l1 "Protein Whsc1l1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1407
pfam12047143 pfam12047, DNMT1-RFD, Cytosine specific DNA methyl 3e-23
pfam0062851 pfam00628, PHD, PHD-finger 4e-04
smart0024947 smart00249, PHD, PHD zinc finger 0.003
>gnl|CDD|221394 pfam12047, DNMT1-RFD, Cytosine specific DNA methyltransferase replication foci domain Back     alignment and domain information 
 Score = 97.0 bits (242), Expect = 3e-23
 Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 15/138 (10%)

Query: 12  QKLVSDYYFEHEGERKQKEIISFSALPIQWNENERTGGCKELIYL-------RGAADSGL 64
           Q+ ++++           E+ S   LPI+ N +    G  + IY        +G  D GL
Sbjct: 6   QRKLTNFALY----DSDGELCSLETLPIKKNVDLFISGVIKPIYDDEPSLEGKGVRDKGL 61

Query: 65  QKIFKPVIAWKFDLTNVIPEIFVLSKENSWIKLQKPRKCY----EEIYRTILIMVHCLSY 120
           +     +  W     +    I  LS + +W KL KP K Y    E ++    + V  L +
Sbjct: 62  EIFLGRIKEWTISGGDDGEPIIWLSTDFAWYKLLKPSKSYAPLYEPVFEKARVTVEVLKF 121

Query: 121 AKRNPEATAKSIWDFLSR 138
            KRNP     S+ D L+R
Sbjct: 122 LKRNPRVPDLSLEDLLAR 139

This domain is part of a cytosine specific DNA methyltransferase enzyme. It functions non-catalytically to target the protein towards replication foci. This allows the DNMT1 protein to methylate the correct residues. This domain targets DMAP1 and HDAC2 to the replication foci during the S phase of mitosis. They are thought to have some importance in conversion of critical histone lysine moieties. Length = 143
>gnl|CDD|201356 pfam00628, PHD, PHD-finger Back     alignment and domain information
>gnl|CDD|214584 smart00249, PHD, PHD zinc finger Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1407
PF12047146 DNMT1-RFD: Cytosine specific DNA methyltransferase 99.79
KOG4443694 consensus Putative transcription factor HALR/MLL3, 98.75
KOG1244336 consensus Predicted transcription factor Requiem/N 98.72
KOG4299613 consensus PHD Zn-finger protein [General function 98.24
KOG4443694 consensus Putative transcription factor HALR/MLL3, 98.0
KOG1512381 consensus PHD Zn-finger protein [General function 97.82
KOG0956900 consensus PHD finger protein AF10 [General functio 97.54
KOG4299613 consensus PHD Zn-finger protein [General function 97.51
KOG0954893 consensus PHD finger protein [General function pre 97.42
COG5141669 PHD zinc finger-containing protein [General functi 97.42
KOG1244336 consensus Predicted transcription factor Requiem/N 97.41
KOG1512381 consensus PHD Zn-finger protein [General function 97.41
KOG09551051 consensus PHD finger protein BR140/LIN-49 [General 97.39
PRK00274272 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 97.22
KOG14731414 consensus Nucleosome remodeling factor, subunit NU 97.11
PHA03412241 putative methyltransferase; Provisional 97.08
PF0062851 PHD: PHD-finger; InterPro: IPR019787 Zinc finger ( 97.06
KOG0383696 consensus Predicted helicase [General function pre 96.96
PF02384311 N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 T 96.85
COG5034271 TNG2 Chromatin remodeling protein, contains PhD zi 96.81
KOG1973274 consensus Chromatin remodeling protein, contains P 96.77
smart0024947 PHD PHD zinc finger. The plant homeodomain (PHD) f 96.69
TIGR02987524 met_A_Alw26 type II restriction m6 adenine DNA met 96.65
KOG08251134 consensus PHD Zn-finger protein [General function 96.61
TIGR00755253 ksgA dimethyladenosine transferase. Alternate name 96.42
PRK14896258 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 96.37
PF0062851 PHD: PHD-finger; InterPro: IPR019787 Zinc finger ( 96.35
KOG0383696 consensus Predicted helicase [General function pre 96.07
smart0024947 PHD PHD zinc finger. The plant homeodomain (PHD) f 95.91
PF15446175 zf-PHD-like: PHD/FYVE-zinc-finger like domain 95.79
PTZ00338294 dimethyladenosine transferase-like protein; Provis 95.64
PF01170179 UPF0020: Putative RNA methylase family UPF0020; In 95.51
PF13659117 Methyltransf_26: Methyltransferase domain; PDB: 3G 93.93
PF15446175 zf-PHD-like: PHD/FYVE-zinc-finger like domain 93.56
PF00398262 RrnaAD: Ribosomal RNA adenine dimethylase; InterPr 93.48
KOG1701468 consensus Focal adhesion adaptor protein Paxillin 93.34
PRK10909199 rsmD 16S rRNA m(2)G966-methyltransferase; Provisio 93.04
KOG08251134 consensus PHD Zn-finger protein [General function 92.23
KOG1973274 consensus Chromatin remodeling protein, contains P 92.21
TIGR00479431 rumA 23S rRNA (uracil-5-)-methyltransferase RumA. 92.13
KOG4323464 consensus Polycomb-like PHD Zn-finger protein [Gen 91.55
PF1377190 zf-HC5HC2H: PHD-like zinc-binding domain 90.95
TIGR01177329 conserved hypothetical protein TIGR01177. This fam 90.69
smart00650169 rADc Ribosomal RNA adenine dimethylases. 90.34
PF13832110 zf-HC5HC2H_2: PHD-zinc-finger like domain 90.34
KOG4323464 consensus Polycomb-like PHD Zn-finger protein [Gen 90.13
PF13832110 zf-HC5HC2H_2: PHD-zinc-finger like domain 89.83
KOG0957707 consensus PHD finger protein [General function pre 89.49
TIGR02085374 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransfer 89.49
PF05175170 MTS: Methyltransferase small domain; InterPro: IPR 88.33
PRK03522315 rumB 23S rRNA methyluridine methyltransferase; Rev 87.12
PRK13168443 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewe 86.63
COG2263198 Predicted RNA methylase [Translation, ribosomal st 86.42
TIGR03533284 L3_gln_methyl protein-(glutamine-N5) methyltransfe 85.19
KOG09551051 consensus PHD finger protein BR140/LIN-49 [General 84.46
PF07669106 Eco57I: Eco57I restriction-modification methylase; 84.23
PHA03411279 putative methyltransferase; Provisional 83.79
TIGR03534251 RF_mod_PrmC protein-(glutamine-N5) methyltransfera 83.55
COG2265432 TrmA SAM-dependent methyltransferases related to t 83.44
COG2226238 UbiE Methylase involved in ubiquinone/menaquinone 83.18
PRK11805307 N5-glutamine S-adenosyl-L-methionine-dependent met 82.55
KOG0957707 consensus PHD finger protein [General function pre 82.22
PRK11188209 rrmJ 23S rRNA methyltransferase J; Provisional 82.2
PRK14967223 putative methyltransferase; Provisional 81.14
>PF12047 DNMT1-RFD: Cytosine specific DNA methyltransferase replication foci domain; InterPro: IPR022702 This domain is part of a cytosine specific DNA methyltransferase enzyme Back     alignment and domain information 
Probab=99.79  E-value=2.6e-20  Score=186.26  Aligned_cols=131  Identities=31%  Similarity=0.541  Sum_probs=101.4

Q ss_pred             ccccccccccceEEeeccccccCCceeeeecceeecccccCCCCcceeEE----------EeecCCCCcEEEEEEEEEEe
Q 000584            7 EVEVGQKLVSDYYFEHEGERKQKEIISFSALPIQWNENERTGGCKELIYL----------RGAADSGLQKIFKPVIAWKF   76 (1407)
Q Consensus         7 e~E~~~~~V~~Y~f~d~~~~~~~~pVsFs~LPi~w~~~~~~~~~k~~vfL----------rG~~dnGlq~i~k~V~AWr~   76 (1407)
                      |+|.++..|++|+|.|+    +++||+|+.||++|+++....|..+.+++          +|..++|++.++++|++|.+
T Consensus         1 ~~~~p~r~L~~f~~~d~----~~~~~~le~l~~~~~~~~~~sG~v~~~~~~~~~~~~~~~~g~~~~g~~~~l~~I~~W~i   76 (146)
T PF12047_consen    1 EDDLPMRSLDDFSFYDS----DGEPVSLELLPIEWNVDLFASGVVKPIGLWGDDEPSPKEKGVRDEGVRIRLGPIKEWWI   76 (146)
T ss_dssp             -SSS-EEEEEEEEEEET----TSBB--STTSTTTTT--EEEEEEEEETT-------SSTS-SEEEEC----ES-ECEEEE
T ss_pred             CCCCcceEEEEEEEEeC----CCCEEeeeeccccCCCcccceEEecccCcccccCccccccCccCCCcccceeceeEEEE
Confidence            56788899999999999    99999999999999998877887889998          89999999999999999999


Q ss_pred             ecCCCcceEEEEecCCceEEeCCccch----HHHHHHHHHHhhhhhhhhccCchhhhhhHHHHhhhhcc
Q 000584           77 DLTNVIPEIFVLSKENSWIKLQKPRKC----YEEIYRTILIMVHCLSYAKRNPEATAKSIWDFLSRFFC  141 (1407)
Q Consensus        77 ~L~~~~PeIsVLs~e~~WI~L~KPrks----Yee~iRtvLITv~~LhfvKknPe~s~kslwdhL~kvFs  141 (1407)
                      ++....|.+.+++.+.+|++|+||+++    |+.++|++.||++++|||+++|+.+..++|++|.++++
T Consensus        77 ~~~~~~~~~i~i~T~~awY~L~kPs~~Y~~~y~~~~~~~~l~~~v~~~l~~~~~~~~~s~~d~l~~v~~  145 (146)
T PF12047_consen   77 DGGDDGPPIIWISTDYAWYRLMKPSKSYAPWYEPFLRKARLTVRVIHFLKKNPRASDLSYEDLLARVFR  145 (146)
T ss_dssp             E-SSSSS-EEEEEESS-EEEE-SB-TTTHHHHCCHHHHHHHHHHHHHHHHHHT---T--HHHHHHHHHH
T ss_pred             EecCCCccEEEEEECCcEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHhhCcccccCCHHHHHHHHhc
Confidence            999999999999999999999999999    55688999999999999999999999999999999875

It functions non-catalytically to target the protein towards replication foci. This allows the DNMT1 protein to methylate the correct residues. This domain targets DMAP1 and HDAC2 to the replication foci during the S phase of mitosis. They are thought to have some importance in conversion of critical histone lysine moieties []. A structure exists for the human cytosine specific DNA methyltransferase replication foci domain. ; PDB: 3AV6_A 3AV5_A 3AV4_A 3EPZ_B.
>KOG4443 consensus Putative transcription factor HALR/MLL3, involved in embryonic development [General function prediction only] Back     alignment and domain information
>KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription] Back     alignment and domain information
>KOG4299 consensus PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>KOG4443 consensus Putative transcription factor HALR/MLL3, involved in embryonic development [General function prediction only] Back     alignment and domain information
>KOG1512 consensus PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>KOG0956 consensus PHD finger protein AF10 [General function prediction only] Back     alignment and domain information
>KOG4299 consensus PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>KOG0954 consensus PHD finger protein [General function prediction only] Back     alignment and domain information
>COG5141 PHD zinc finger-containing protein [General function prediction only] Back     alignment and domain information
>KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription] Back     alignment and domain information
>KOG1512 consensus PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only] Back     alignment and domain information
>PRK00274 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed Back     alignment and domain information
>KOG1473 consensus Nucleosome remodeling factor, subunit NURF301/BPTF [Chromatin structure and dynamics; Transcription] Back     alignment and domain information
>PHA03412 putative methyltransferase; Provisional Back     alignment and domain information
>PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>KOG0383 consensus Predicted helicase [General function prediction only] Back     alignment and domain information
>PF02384 N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 This domain is fpound in N-6 adenine-specific DNA methylase (2 Back     alignment and domain information
>COG5034 TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] Back     alignment and domain information
>KOG1973 consensus Chromatin remodeling protein, contains PHD Zn-finger [Chromatin structure and dynamics] Back     alignment and domain information
>smart00249 PHD PHD zinc finger Back     alignment and domain information
>TIGR02987 met_A_Alw26 type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family Back     alignment and domain information
>KOG0825 consensus PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>TIGR00755 ksgA dimethyladenosine transferase Back     alignment and domain information
>PRK14896 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Provisional Back     alignment and domain information
>PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>KOG0383 consensus Predicted helicase [General function prediction only] Back     alignment and domain information
>smart00249 PHD PHD zinc finger Back     alignment and domain information
>PF15446 zf-PHD-like: PHD/FYVE-zinc-finger like domain Back     alignment and domain information
>PTZ00338 dimethyladenosine transferase-like protein; Provisional Back     alignment and domain information
>PF01170 UPF0020: Putative RNA methylase family UPF0020; InterPro: IPR000241 This domain is probably a methylase Back     alignment and domain information
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A Back     alignment and domain information
>PF15446 zf-PHD-like: PHD/FYVE-zinc-finger like domain Back     alignment and domain information
>PF00398 RrnaAD: Ribosomal RNA adenine dimethylase; InterPro: IPR001737 This family of proteins include rRNA adenine dimethylases (e Back     alignment and domain information
>KOG1701 consensus Focal adhesion adaptor protein Paxillin and related LIM proteins [Signal transduction mechanisms] Back     alignment and domain information
>PRK10909 rsmD 16S rRNA m(2)G966-methyltransferase; Provisional Back     alignment and domain information
>KOG0825 consensus PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>KOG1973 consensus Chromatin remodeling protein, contains PHD Zn-finger [Chromatin structure and dynamics] Back     alignment and domain information
>TIGR00479 rumA 23S rRNA (uracil-5-)-methyltransferase RumA Back     alignment and domain information
>KOG4323 consensus Polycomb-like PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>PF13771 zf-HC5HC2H: PHD-like zinc-binding domain Back     alignment and domain information
>TIGR01177 conserved hypothetical protein TIGR01177 Back     alignment and domain information
>smart00650 rADc Ribosomal RNA adenine dimethylases Back     alignment and domain information
>PF13832 zf-HC5HC2H_2: PHD-zinc-finger like domain Back     alignment and domain information
>KOG4323 consensus Polycomb-like PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>PF13832 zf-HC5HC2H_2: PHD-zinc-finger like domain Back     alignment and domain information
>KOG0957 consensus PHD finger protein [General function prediction only] Back     alignment and domain information
>TIGR02085 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransferase RumB Back     alignment and domain information
>PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases Back     alignment and domain information
>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed Back     alignment and domain information
>PRK13168 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewed Back     alignment and domain information
>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific Back     alignment and domain information
>KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only] Back     alignment and domain information
>PF07669 Eco57I: Eco57I restriction-modification methylase; InterPro: IPR011639 This entry contains restriction modification methylases, which in the case of endonuclease Eco57I is found adjacent to the DNA cleavage domain, which recognises asymmetric DNA sequence 5'-CTGAAG [, ] Back     alignment and domain information
>PHA03411 putative methyltransferase; Provisional Back     alignment and domain information
>TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific Back     alignment and domain information
>COG2265 TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional Back     alignment and domain information
>KOG0957 consensus PHD finger protein [General function prediction only] Back     alignment and domain information
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional Back     alignment and domain information
>PRK14967 putative methyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1407
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
2ysm_A111 Myeloid/lymphoid or mixed-lineage leukemia protein 6e-07
2ysm_A111 Myeloid/lymphoid or mixed-lineage leukemia protein 6e-06
3v43_A112 Histone acetyltransferase KAT6A; MOZ, PHD finger, 1e-06
2kwj_A114 Zinc finger protein DPF3; acetyl-lysine, transcrip 2e-06
1fp0_A88 KAP-1 corepressor; PHD domain, C3HC4 type zinc bin 3e-06
2l5u_A61 Chromodomain-helicase-DNA-binding protein 4; CHD4, 3e-06
3ql9_A129 Transcriptional regulator ATRX; zinc finger, trans 5e-06
2lbm_A142 Transcriptional regulator ATRX; metal binding prot 8e-06
1xwh_A66 Autoimmune regulator; PHD domain, Zn binding domai 9e-06
1mm2_A61 MI2-beta; PHD, zinc finger, protein scaffold, DNA 2e-05
2yql_A56 PHD finger protein 21A; PHD domain, structural gen 4e-05
2ro1_A189 Transcription intermediary factor 1-beta; KAP, TIF 4e-05
2puy_A60 PHD finger protein 21A; PHD finger, histone CODE, 9e-05
2pv0_B386 DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, 6e-04
2k16_A75 Transcription initiation factor TFIID subunit 3; p 8e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 64.1 bits (155), Expect = 3e-10
 Identities = 94/672 (13%), Positives = 186/672 (27%), Gaps = 193/672 (28%)

Query: 251 HATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYKQHQCFACGKLGSSDKETGAEVFPC 310
           H   + GE  +       KD +    + F  N        F C  +    K     +   
Sbjct: 6   HMDFETGEHQYQ-----YKDILSVFEDAFVDN--------FDCKDVQDMPKS----ILS- 47

Query: 311 VSATCGHFYH-PHCVSK------LLLRDDEVAADQLAKSIIAGE-SF-TCPLHKCCICKQ 361
                 H       VS        LL   E    +  + ++     F   P+        
Sbjct: 48  -KEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS 106

Query: 362 GENK---ADSDLQFAVCRRCPKAYHRKCLPRKIAFEDKLEEGIITRAWEGLLPNHRILIY 418
              +      D  +   +   K Y+   + R         +  + +A   L P   +LI 
Sbjct: 107 MMTRMYIEQRDRLYNDNQVFAK-YN---VSR----LQPYLK--LRQALLELRPAKNVLID 156

Query: 419 --------CLKHEI--DDEIGTPIRDHIIFPGIEENKTIIDRPRKKQSL---ASPSGKQK 465
                    +  ++    ++   +   I +  ++   +        Q L     P+   +
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216

Query: 466 VASTKSSLTSKAPPQGKFSVK-ALKRVPSKAGQGETMEISER-----LLVGSD--SSRRA 517
                 S  S        S++  L+R+           +  +     LLV  +  +++  
Sbjct: 217 ------SDHSSNIKLRIHSIQAELRRL-----------LKSKPYENCLLVLLNVQNAKAW 259

Query: 518 KATDVSRK-----SFKGNVKSLSVQVDRSSSVDSKKTSLGER----LYAAFVTEGT---- 564
            A ++S K      FK     LS       S+D    +L       L   ++        
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319

Query: 565 EQTK---------FGK--QDNSDR-ETSRTVTVKPLRKKLISELPSLDEDSKRR----LS 608
            +             +  +D     +  + V    L   + S L  L+    R+    LS
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379

Query: 609 SLMKDAASSVRMEEILKRHKIPSTHAYASKSAVDKAITL---GKVEGSVEAI------RT 659
                A              IP+             ++L     ++  V  +       +
Sbjct: 380 VFPPSA-------------HIPT-----------ILLSLIWFDVIKSDVMVVVNKLHKYS 415

Query: 660 ALKKLDVDGS-SIED------AKAVCEPEVLSQIFKWKNKLKVY-----LAPFLHGMRYT 707
            ++K   + + SI         K   E  +   I    N  K +     + P+L    Y+
Sbjct: 416 LVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475

Query: 708 SFGRHFTKVDKLQAIVDKLHWYVNDGDMIVDFCCGANDFSCLMKKKLDETGKNC------ 761
             G H   ++  + +      +       +DF      F   +++K+             
Sbjct: 476 HIGHHLKNIEHPERMTLFRMVF-------LDF-----RF---LEQKIRHDSTAWNASGSI 520

Query: 762 --------LYKNYDILPAKNDFNFEKR--DWMTVEPKE-----LAPGSRLI-MGLNPPFG 805
                    YK Y I    ND  +E+     +   PK       +  + L+ + L     
Sbjct: 521 LNTLQQLKFYKPY-I--CDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDE 577

Query: 806 VKAGLANKFINK 817
                A+K + +
Sbjct: 578 AIFEEAHKQVQR 589
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens} Length = 111 Back     alignment and structure
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens} Length = 111 Back     alignment and structure
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A Length = 112 Back     alignment and structure
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A* Length = 114 Back     alignment and structure
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2 Length = 88 Back     alignment and structure
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens} Length = 61 Back     alignment and structure
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A Length = 129 Back     alignment and structure
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A Length = 142 Back     alignment and structure
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A Length = 66 Back     alignment and structure
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A Length = 61 Back     alignment and structure
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 56 Back     alignment and structure
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens} Length = 189 Back     alignment and structure
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens} Length = 60 Back     alignment and structure
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B* Length = 386 Back     alignment and structure
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A* Length = 75 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1407
d1fp0a170 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF- 3e-04
d1wema_76 g.50.1.2 (A:) Death associated transcription facto 7e-04
d1mm2a_61 g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens 0.002
d1f62a_51 g.50.1.2 (A:) Williams-Beuren syndrome transcripti 0.003
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} Length = 70 Back     information, alignment and structure

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Nuclear corepressor KAP-1 (TIF-1beta)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 3e-04
 Identities = 14/63 (22%), Positives = 18/63 (28%), Gaps = 12/63 (19%)

Query: 227 DSVCSFCDNGGDLLCCEGRCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYK 286
            ++C  C   GDL+ C   C   FH          C    L     E    + C  C   
Sbjct: 7   ATICRVCQKPGDLVMCNQ-CEFCFHLD--------CHLPALQDVPGE---EWSCSLCHVL 54

Query: 287 QHQ 289
              
Sbjct: 55  PDL 57
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 76 Back     information, alignment and structure
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} Length = 61 Back     information, alignment and structure
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} Length = 51 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1407
d1mm2a_61 Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606 97.68
d1fp0a170 Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo 97.54
d2okca1425 Type I restriction enzyme StySJI M protein {Bacter 97.31
d2ar0a1524 M.EcoKI {Escherichia coli [TaxId: 562]} 97.0
d1fp0a170 Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo 96.92
d1f62a_51 Williams-Beuren syndrome transcription factor, WST 96.77
d2f8la1328 Hypothetical protein Lmo1582 {Listeria monocytogen 96.74
d2ih2a1223 DNA methylase TaqI, N-terminal domain {Thermus aqu 96.71
d1mm2a_61 Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606 96.49
d1weva_88 PHD finger protein 22 {Mouse (Mus musculus) [TaxId 96.44
d1weva_88 PHD finger protein 22 {Mouse (Mus musculus) [TaxId 95.99
d1wepa_79 PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 95.74
d1wesa_71 PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mu 95.71
d1we9a_64 PHD finger protein At5g26210 {Thale cress (Arabido 95.66
d1f62a_51 Williams-Beuren syndrome transcription factor, WST 95.16
d1weea_72 PHD finger protein At1g33420 {Thale cress (Arabido 94.54
d1wema_76 Death associated transcription factor 1, Datf1 (DI 93.33
d1wy7a1201 Hypothetical protein PH1948 {Archaeon Pyrococcus h 93.33
d1weea_72 PHD finger protein At1g33420 {Thale cress (Arabido 92.83
d1ne2a_197 Hypothetical protein Ta1320 {Archaeon Thermoplasma 92.8
d2pnxa151 Inhibitor of growth protein 4, Ing4 {Homo sapiens 92.79
d1we9a_64 PHD finger protein At5g26210 {Thale cress (Arabido 92.69
d1wewa_78 Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop 92.61
d1uwva2358 rRNA (Uracil-5-)-methyltransferase RumA, catalytic 92.59
d1wepa_79 PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 89.4
d1wesa_71 PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mu 88.97
d1wema_76 Death associated transcription factor 1, Datf1 (DI 87.61
d2esra1152 Putative methyltransferase SPy1538 {Streptococcus 83.37
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Mi2-beta (CHD4)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.4e-05  Score=55.97  Aligned_cols=51  Identities=27%  Similarity=0.759  Sum_probs=38.4

Q ss_pred             CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
Q ss_conf             347865663478893220146434554476333654311247997342302475004774101
Q 000584          224 ELFDSVCSFCDNGGDLLCCEGRCLRSFHATIDAGEESHCASLGLTKDEVEAMLNFFCKNCEYK  286 (1407)
Q Consensus       224 dl~DdVCaICedGGeLLCCDG~C~RSFH~sCldGeeSfClsLGLTeaevqa~ekWiC~nCe~k  286 (1407)
                      |..+++|.+|.++|+||+|+ .|.++||..|+        .+.+..  + +.+.|+|+.|..+
T Consensus         6 d~~~~~C~~C~~~g~lv~Cd-~C~~~~H~~C~--------~~~~~~--~-~~~~W~C~~C~~~   56 (61)
T d1mm2a_           6 DHHMEFCRVCKDGGELLCCD-TCPSSYHIHCL--------NPPLPE--I-PNGEWLCPRCTCP   56 (61)
T ss_dssp             CSSCSSCTTTCCCSSCBCCS-SSCCCBCSSSS--------SSCCSS--C-CSSCCCCTTTTTT
T ss_pred             CCCCCCCCCCCCCCEEEEEC-CCCCCCCHHHC--------CCCCCC--C-CCCCEECCCCCCC
T ss_conf             68868986789979588869-99960761145--------888575--8-9976899788384
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d2ar0a1 c.66.1.45 (A:6-529) M.EcoKI {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]} Back     information, alignment and structure
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]} Back     information, alignment and structure
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure