Citrus Sinensis ID: 000657
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1370 | 2.2.26 [Sep-21-2011] | |||||||
| Q8GUQ8 | 1361 | Xanthine dehydrogenase 1 | yes | no | 0.993 | 1.0 | 0.776 | 0.0 | |
| F4JLI5 | 1353 | Xanthine dehydrogenase 2 | no | no | 0.982 | 0.994 | 0.770 | 0.0 | |
| Q6AUV1 | 1369 | Xanthine dehydrogenase OS | yes | no | 0.986 | 0.986 | 0.711 | 0.0 | |
| P47990 | 1358 | Xanthine dehydrogenase/ox | yes | no | 0.959 | 0.967 | 0.487 | 0.0 | |
| Q54FB7 | 1358 | Xanthine dehydrogenase OS | yes | no | 0.951 | 0.959 | 0.473 | 0.0 | |
| P47989 | 1333 | Xanthine dehydrogenase/ox | yes | no | 0.943 | 0.969 | 0.484 | 0.0 | |
| Q9MYW6 | 1331 | Xanthine dehydrogenase/ox | N/A | no | 0.946 | 0.974 | 0.481 | 0.0 | |
| P22985 | 1331 | Xanthine dehydrogenase/ox | yes | no | 0.945 | 0.973 | 0.478 | 0.0 | |
| Q00519 | 1335 | Xanthine dehydrogenase/ox | yes | no | 0.943 | 0.967 | 0.475 | 0.0 | |
| P80457 | 1332 | Xanthine dehydrogenase/ox | yes | no | 0.942 | 0.969 | 0.474 | 0.0 |
| >sp|Q8GUQ8|XDH1_ARATH Xanthine dehydrogenase 1 OS=Arabidopsis thaliana GN=XDH1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 2230 bits (5779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1064/1370 (77%), Positives = 1224/1370 (89%), Gaps = 9/1370 (0%)
Query: 1 MGSLKNEEEMEQMGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEG 60
MGSLK + E+ G+ +T EA+LYVNG+R+VLPDGLAH+TLLEYLRD+GLTGTKLGCGEG
Sbjct: 1 MGSLKKDGEI---GDEFT-EALLYVNGVRRVLPDGLAHMTLLEYLRDLGLTGTKLGCGEG 56
Query: 61 GCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLV 120
GCGACTVMVS YD+KSK VH AVNACLAPLYS+EGMHVI++EG+G+RK GLHP+QESL
Sbjct: 57 GCGACTVMVSSYDRKSKTSVHYAVNACLAPLYSVEGMHVISIEGLGHRKLGLHPVQESLA 116
Query: 121 RSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
SHGSQCGFCTPGFIMSMYSLLRSS+ P+EE+IEE LAGNLCRCTGYRPIVDAFRVFAK
Sbjct: 117 SSHGSQCGFCTPGFIMSMYSLLRSSKNSPSEEEIEECLAGNLCRCTGYRPIVDAFRVFAK 176
Query: 181 TNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEID 240
++DALY +SS+SL++G +CPSTGKPCSCG K + +C + ++ +SYS+ID
Sbjct: 177 SDDALYCGVSSLSLQDGSTICPSTGKPCSCGSKTTNEVASCNED-----RFQSISYSDID 231
Query: 241 GSTYTEKELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTE 300
G+ YT+KELIFPPELLLRK PL L G GG+ WYRP+ LQ+LLELK+ YPD+KLLVGNTE
Sbjct: 232 GAKYTDKELIFPPELLLRKLTPLKLRGNGGITWYRPVCLQNLLELKANYPDAKLLVGNTE 291
Query: 301 VGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHE 360
VGIEMRLKR+QYQVLISV VPELN LNV D+G+E+G+A+RL+ELL++FRK+V ERPAHE
Sbjct: 292 VGIEMRLKRLQYQVLISVAQVPELNALNVNDNGIEVGSALRLSELLRLFRKIVKERPAHE 351
Query: 361 TSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRT 420
TS+CKAFIEQ+KWFAGTQI+NVA +GGNICTASPISDLNPLWMAS A+F I +C G++R+
Sbjct: 352 TSACKAFIEQLKWFAGTQIRNVACIGGNICTASPISDLNPLWMASRAEFRITNCNGDVRS 411
Query: 421 TMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLE 480
A++FFLGYRKVD+ S EILLS+FLPWTRP E+VKEFKQAHRRDDDIA+VN GMRV+LE
Sbjct: 412 IPAKDFFLGYRKVDMGSNEILLSVFLPWTRPLEYVKEFKQAHRRDDDIAIVNGGMRVFLE 471
Query: 481 EKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAP 540
+K ++ VSDA + YGGVAPLSL A+KT+ F++GK+W+++LLQ+ALK++Q+D+++KEDAP
Sbjct: 472 DKGQQLFVSDASIAYGGVAPLSLCARKTEEFLIGKNWNKDLLQDALKVIQSDVVIKEDAP 531
Query: 541 GGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEI 600
GGMV+FRKSLTLSFFFKFFLWVSH + NS E+ P +H+SA+Q R S IG QDYE
Sbjct: 532 GGMVEFRKSLTLSFFFKFFLWVSHNVNNANSAIETFPPSHMSAVQPVPRLSRIGKQDYET 591
Query: 601 TKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGAR 660
K GTSVGS EVHLS+R+QVTGEAEYTDDTP+PPN LHAA VLS+ PHARILSIDDS A+
Sbjct: 592 VKQGTSVGSSEVHLSARMQVTGEAEYTDDTPVPPNTLHAAFVLSKVPHARILSIDDSAAK 651
Query: 661 SSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKV 720
SS GFVG+F A+D+ GDN IGP+V DEELFA++VVTCVGQVIGVVVA+THE AK A+ KV
Sbjct: 652 SSSGFVGLFLAKDIPGDNMIGPIVPDEELFATDVVTCVGQVIGVVVADTHENAKTAAGKV 711
Query: 721 QVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHF 780
V YEELPAILSI+EAI+AKSFHPNTE+ RKGDV++CFQSGQCD++IEGEV++GGQEHF
Sbjct: 712 DVRYEELPAILSIKEAINAKSFHPNTEKRLRKGDVELCFQSGQCDRVIEGEVQMGGQEHF 771
Query: 781 YLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 840
YLEP+ S+VWT+D G+EVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE
Sbjct: 772 YLEPNGSLVWTVDGGSEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 831
Query: 841 TRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLE 900
TRSAFIAAAA+VPS+LLNRPV L LDRD+DMMI+G RHSFLGKYKVGFTNEGK+LALDLE
Sbjct: 832 TRSAFIAAAASVPSYLLNRPVKLILDRDVDMMITGHRHSFLGKYKVGFTNEGKILALDLE 891
Query: 901 IYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLI 960
IYNN GNSLDLSL+VLERAMFHSDNVYEIP+VRI+GNVCFTNFPSNTAFRGFGGPQGMLI
Sbjct: 892 IYNNGGNSLDLSLSVLERAMFHSDNVYEIPHVRIVGNVCFTNFPSNTAFRGFGGPQGMLI 951
Query: 961 TENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARK 1020
TENWIQR+A E+ KSPEEI+E+NFQ EGS+ HY Q LQHCTL LW ELK+SC+FL AR+
Sbjct: 952 TENWIQRIAAELNKSPEEIKEMNFQVEGSVTHYCQTLQHCTLHQLWKELKVSCNFLKARR 1011
Query: 1021 EVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1080
E D FN +NRWKKRG+AMVPTKFGISFT K MNQAGALVHVYTDGTVLVTHGGVEMGQGL
Sbjct: 1012 EADEFNSHNRWKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1071
Query: 1081 HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARME 1140
HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSD+YGAAVLDACEQI ARME
Sbjct: 1072 HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDMYGAAVLDACEQIIARME 1131
Query: 1141 PIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1200
P+ASKHNFN+F EL SACY QRIDLSAHGF+I P++ FDWI+GKGN FRY+TYGAAFAEV
Sbjct: 1132 PVASKHNFNTFTELVSACYFQRIDLSAHGFHIVPDLGFDWISGKGNAFRYYTYGAAFAEV 1191
Query: 1201 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIP 1260
EIDTLTGDFHTR A+++LDLGYSLNPAIDVGQIEGAF+QGLGW+ALEELKWGDAAHKWI
Sbjct: 1192 EIDTLTGDFHTRAADIMLDLGYSLNPAIDVGQIEGAFVQGLGWVALEELKWGDAAHKWIK 1251
Query: 1261 PGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIK 1320
PG L TCGPG+YKIPS+ND+P NVSLLKG+PN KAIHSSKAVGEPPFFLASSVFFAIK
Sbjct: 1252 PGSLLTCGPGNYKIPSINDMPFNLNVSLLKGNPNTKAIHSSKAVGEPPFFLASSVFFAIK 1311
Query: 1321 DAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
+AI AAR + G T WFPL++PATPERIRMAC DEF+APF+NS++ P LSV
Sbjct: 1312 EAIKAARTEVGLTDWFPLESPATPERIRMACFDEFSAPFVNSDFYPNLSV 1361
|
Key enzyme involved in purine catabolism. Catalyzes the oxidation of hypoxanthine to xanthine and the oxidation of xanthine to urate. Regulates the level of ureides and plays an important role during plant growth and development, senescence and response to stresses. Possesses NADH oxidase activity and may contribute to the generation of superoxide anions in planta. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: 7EC: .EC: 1EC: .EC: 4 |
| >sp|F4JLI5|XDH2_ARATH Xanthine dehydrogenase 2 OS=Arabidopsis thaliana GN=XDH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 2164 bits (5607), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1041/1351 (77%), Positives = 1208/1351 (89%), Gaps = 5/1351 (0%)
Query: 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKC 79
EAI+YVNG+R+VLPDGLAH+TLLEYLRD+GLTGTKLGCGEGGCG+CTVMVS YD++SK C
Sbjct: 8 EAIMYVNGVRRVLPDGLAHMTLLEYLRDLGLTGTKLGCGEGGCGSCTVMVSSYDRESKTC 67
Query: 80 VHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMY 139
VH AVNACLAPLYS+EGMHVI++EGVG+RK GLHP+QESL SHGSQCGFCTPGF+MSMY
Sbjct: 68 VHYAVNACLAPLYSVEGMHVISIEGVGHRKLGLHPLQESLASSHGSQCGFCTPGFVMSMY 127
Query: 140 SLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEF 199
+LLRSS+ P+EE+IEE LAGNLCRCTGYRPI+DAFRVFAK++DALY+ +SS+SL++G
Sbjct: 128 ALLRSSKNSPSEEEIEECLAGNLCRCTGYRPIIDAFRVFAKSDDALYSGLSSLSLQDGSN 187
Query: 200 VCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLRK 259
+CPSTGKPCSCG K S A TC + ++ +SYS+IDG+ YT+KELIFPPELLLRK
Sbjct: 188 ICPSTGKPCSCGSKTTSEAATCNED-----RFQSISYSDIDGAKYTDKELIFPPELLLRK 242
Query: 260 SNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVT 319
PL L G G+ WYRP+ LQ+LLELK+ +PD+KLLVGNTEVGIEMRLKR+QY VLIS
Sbjct: 243 LAPLKLGGNEGITWYRPVSLQNLLELKANFPDAKLLVGNTEVGIEMRLKRLQYPVLISAA 302
Query: 320 HVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQI 379
VPELN LNV D+G+E+G+A+RL+ELL++FRKVV ERPAHETS+CKAFIEQ+KWFAGTQI
Sbjct: 303 QVPELNALNVNDNGIEVGSALRLSELLRLFRKVVKERPAHETSACKAFIEQLKWFAGTQI 362
Query: 380 KNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGE 439
+NVA +GGNICTASPISDLNPLWMAS A+F I++C G++R+ A++FFLGYRKVD+ S E
Sbjct: 363 RNVACIGGNICTASPISDLNPLWMASRAEFRIINCNGDVRSIPAKDFFLGYRKVDMGSNE 422
Query: 440 ILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVA 499
ILLS+FLPWTRP E+VKEFKQAHRRDDDIA+VN GMRV+LEEK ++ VSDA +VYGGVA
Sbjct: 423 ILLSVFLPWTRPLEYVKEFKQAHRRDDDIAIVNGGMRVFLEEKGQQLFVSDASIVYGGVA 482
Query: 500 PLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFF 559
PLSL A+ T+ ++GK+W++ LLQ+ALK++Q+D+++KE APGGMV+FRKSLTLSFFFKFF
Sbjct: 483 PLSLRARNTEELLIGKNWNKCLLQDALKVIQSDVLIKEGAPGGMVEFRKSLTLSFFFKFF 542
Query: 560 LWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQ 619
LWV+H + N E+ P +H+SA+Q R S IG QDYE K GTSVG PEVHLS+R+Q
Sbjct: 543 LWVTHHVNNVNPTIETFPPSHMSAVQLVPRFSRIGKQDYETVKQGTSVGLPEVHLSARMQ 602
Query: 620 VTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR 679
VTGEAEYTDDTP+PP LHAALVLS+ PHARILS+DDS A+SS GFVG+F A+DV G+N
Sbjct: 603 VTGEAEYTDDTPLPPCTLHAALVLSKVPHARILSVDDSAAKSSSGFVGLFLAKDVPGNNM 662
Query: 680 IGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDA 739
IGP+VADEELFA++VVTCVGQVIGV+VA+THE AK A+RKV V Y+ELPAILSI+EAI+A
Sbjct: 663 IGPIVADEELFATDVVTCVGQVIGVLVADTHENAKTAARKVDVRYQELPAILSIKEAINA 722
Query: 740 KSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVH 799
KSFHPNTER RKGDV++CFQSGQCD+IIEGEV++GGQEHFYLEP+ S+VWT+D GNEVH
Sbjct: 723 KSFHPNTERRLRKGDVELCFQSGQCDRIIEGEVQMGGQEHFYLEPNGSLVWTIDGGNEVH 782
Query: 800 MISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNR 859
MISSTQAPQ+HQKYVSHVLGLPMSKVVCKTKR+GGGFGGKETRSAFIAAAA+VPS+LLNR
Sbjct: 783 MISSTQAPQQHQKYVSHVLGLPMSKVVCKTKRLGGGFGGKETRSAFIAAAASVPSYLLNR 842
Query: 860 PVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERA 919
PV L LDRD+DMMI+G RHSF+GKYKVGFTNEGK+LALDLEIYNN GNS+DLSL+ LERA
Sbjct: 843 PVKLILDRDVDMMITGHRHSFVGKYKVGFTNEGKILALDLEIYNNGGNSMDLSLSNLERA 902
Query: 920 MFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEI 979
MFHSDNVYEIP+VRI+GNVCFTNFPSNTAFRGFGGPQGMLITENWIQR+A E+ K PEEI
Sbjct: 903 MFHSDNVYEIPHVRIVGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRIAAELDKIPEEI 962
Query: 980 REINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMV 1039
+E+NFQ EGSI HY Q LQHCTL LW ELK+S +FL R+E D FN +NRWKKRG+AMV
Sbjct: 963 KEMNFQVEGSITHYFQSLQHCTLHQLWKELKVSSNFLKTRREADEFNSHNRWKKRGVAMV 1022
Query: 1040 PTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSV 1099
PTKFGISFT K MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAA+AFNI LSSV
Sbjct: 1023 PTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAATAFNILLSSV 1082
Query: 1100 FVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACY 1159
FVSETSTDKVPNASPTAASASSD+YGAAVLDACEQI ARMEP+ASKHNFN+F+ELASACY
Sbjct: 1083 FVSETSTDKVPNASPTAASASSDMYGAAVLDACEQIIARMEPVASKHNFNTFSELASACY 1142
Query: 1160 VQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILD 1219
QRIDLSAHGF+I PE++FDW++GKGN +RY+TYGAAFAEVEIDTLTGDFHTR A+++LD
Sbjct: 1143 FQRIDLSAHGFHIVPELEFDWVSGKGNAYRYYTYGAAFAEVEIDTLTGDFHTRKADIMLD 1202
Query: 1220 LGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLND 1279
LGYSLNP ID+GQIEGAF+QGLGW+ALEELKWGDAAHKWI PG L TCGPGSYKIPS+ND
Sbjct: 1203 LGYSLNPTIDIGQIEGAFVQGLGWVALEELKWGDAAHKWIKPGSLLTCGPGSYKIPSIND 1262
Query: 1280 VPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLD 1339
+P + NVSLLKG+PN KAIHSSKAVGEPPFFLA+S FFAIK+AI AAR++ G T WFPL+
Sbjct: 1263 MPFQLNVSLLKGNPNAKAIHSSKAVGEPPFFLAASAFFAIKEAIKAARSEVGLTNWFPLE 1322
Query: 1340 NPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
PATPERIRMAC DEF+APF NS++ PKLSV
Sbjct: 1323 TPATPERIRMACFDEFSAPFANSDFCPKLSV 1353
|
Key enzyme involved in purine catabolism. Catalyzes the oxidation of hypoxanthine to xanthine and the oxidation of xanthine to urate. Regulates the level of ureides and plays a role during plant growth and development and senescence. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|Q6AUV1|XDH_ORYSJ Xanthine dehydrogenase OS=Oryza sativa subsp. japonica GN=XDH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 2034 bits (5269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 964/1355 (71%), Positives = 1149/1355 (84%), Gaps = 4/1355 (0%)
Query: 17 WTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKS 76
W+ EA++YVNG+R+VLPDGLAHLTLL+YLRDIGL GTKLGCGEGGCGACTVMVS YD+ +
Sbjct: 18 WSGEAVVYVNGVRRVLPDGLAHLTLLQYLRDIGLPGTKLGCGEGGCGACTVMVSCYDQTT 77
Query: 77 KKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIM 136
KK H A+NACLAPLYS+EGMH+ITVEG+GNR+ GLHPIQE L +HGSQCGFCTPGF+M
Sbjct: 78 KKTQHFAINACLAPLYSVEGMHIITVEGIGNRQRGLHPIQERLAMAHGSQCGFCTPGFVM 137
Query: 137 SMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKE 196
SMY+LLRSS+ PPTEEQIE+SLAGNLCRCTGYRPI+DAFRVF+K +D LY N SS+ +
Sbjct: 138 SMYALLRSSEQPPTEEQIEDSLAGNLCRCTGYRPIIDAFRVFSKRDDLLYNN-SSLKNAD 196
Query: 197 GEFVCPSTGKPCSCG-MKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPEL 255
G +CPSTGKPCSCG K+++ +++ + K+Y P SY+EIDG+ Y+EKELIFPPEL
Sbjct: 197 GRPICPSTGKPCSCGDQKDINGSES--SLLTPTKSYSPCSYNEIDGNAYSEKELIFPPEL 254
Query: 256 LLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVL 315
LRK L L+GF G++WYRPLKL+ +L LK+ YP++KL++GN+EVG+E + K QY+VL
Sbjct: 255 QLRKVTSLKLNGFNGIRWYRPLKLKQVLHLKACYPNAKLIIGNSEVGVETKFKNAQYKVL 314
Query: 316 ISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFA 375
ISVTHVPEL+ L VK+DG+ IG++VRL +L RKV+ ER +HE SSC+A + Q+KWFA
Sbjct: 315 ISVTHVPELHTLKVKEDGIHIGSSVRLAQLQNFLRKVILERDSHEISSCEAILRQLKWFA 374
Query: 376 GTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDL 435
GTQI+NVASVGGNICTASPISDLNPLWMA+GA F I+D NIRT A++FFLGYRKVDL
Sbjct: 375 GTQIRNVASVGGNICTASPISDLNPLWMATGATFEIIDVNNNIRTIPAKDFFLGYRKVDL 434
Query: 436 TSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVY 495
EILLS+ LPWTRPFEFVKEFKQAHRR+DDIALVNAGMRVY+ + + +W++SD ++Y
Sbjct: 435 KPDEILLSVILPWTRPFEFVKEFKQAHRREDDIALVNAGMRVYIRKVEGDWIISDVSIIY 494
Query: 496 GGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFF 555
GGVA +S A KT+TF+ GK W LL +L+ D++L E+APGGMV+FR SLTLSFF
Sbjct: 495 GGVAAVSHRASKTETFLTGKKWDYGLLDKTFDLLKEDVVLAENAPGGMVEFRSSLTLSFF 554
Query: 556 FKFFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLS 615
FKFFL V+H+M K K+ + +T+LSA+QSF RP +G Q YE+ + GT+VG P VH S
Sbjct: 555 FKFFLHVTHEMNIKGFWKDGLHATNLSAIQSFTRPVGVGTQCYELVRQGTAVGQPVVHTS 614
Query: 616 SRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQ 675
+ LQVTGEAEYTDDTP PPN LHAALVLS + HARILSID S A+SSPGF G+F ++DV
Sbjct: 615 AMLQVTGEAEYTDDTPTPPNTLHAALVLSTKAHARILSIDASLAKSSPGFAGLFLSKDVP 674
Query: 676 GDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQE 735
G N GPV+ DEE+FAS+VVTCVGQ++G+VVA+T + AK A+ KV +EY ELPAILSI+E
Sbjct: 675 GANHTGPVIHDEEVFASDVVTCVGQIVGLVVADTRDNAKAAANKVNIEYSELPAILSIEE 734
Query: 736 AIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHG 795
A+ A SFHPN++RC KG+V+ CF SG CD+IIEG+V+VGGQEHFY+EP S++VW +D G
Sbjct: 735 AVKAGSFHPNSKRCLVKGNVEQCFLSGACDRIIEGKVQVGGQEHFYMEPQSTLVWPVDSG 794
Query: 796 NEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSF 855
NE+HMISSTQAPQKHQKYV++VLGLP S+VVCKTKRIGGGFGGKETRSA AAAA+V ++
Sbjct: 795 NEIHMISSTQAPQKHQKYVANVLGLPQSRVVCKTKRIGGGFGGKETRSAIFAAAASVAAY 854
Query: 856 LLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAV 915
L +PV L LDRDIDMM +GQRHSFLGKYKVGFT++GK+LALDL++YNN G+S DLSL V
Sbjct: 855 CLRQPVKLVLDRDIDMMTTGQRHSFLGKYKVGFTDDGKILALDLDVYNNGGHSHDLSLPV 914
Query: 916 LERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKS 975
LERAMFHSDNVY+IPNVR+ G VCFTNFPSNTAFRGFGGPQ MLI ENWIQ +A E+++S
Sbjct: 915 LERAMFHSDNVYDIPNVRVNGQVCFTNFPSNTAFRGFGGPQAMLIAENWIQHMATELKRS 974
Query: 976 PEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRG 1035
PEEI+E+NFQ EGS+LHYGQ LQ+CT+ +W+ELK+SC+F+ ARK V +FN NNRW+KRG
Sbjct: 975 PEEIKELNFQSEGSVLHYGQLLQNCTIHSVWDELKVSCNFMEARKAVIDFNNNNRWRKRG 1034
Query: 1036 IAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIP 1095
IAMVPTKFGISFT K MNQAGALV VYTDGTVLVTHGGVEMGQGLHTKVAQVAAS+FNIP
Sbjct: 1035 IAMVPTKFGISFTTKFMNQAGALVQVYTDGTVLVTHGGVEMGQGLHTKVAQVAASSFNIP 1094
Query: 1096 LSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELA 1155
LSS+F+SETSTDKVPNA+PTAASASSD+YGAAVLDAC+QI ARMEP+AS+ N SFAEL
Sbjct: 1095 LSSIFISETSTDKVPNATPTAASASSDLYGAAVLDACQQIMARMEPVASRGNHKSFAELV 1154
Query: 1156 SACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMAN 1215
ACY++RIDLSAHGFYITP++ FDW++GKG PF YFTYGAAFAEVEIDTLTGDFHTR +
Sbjct: 1155 LACYLERIDLSAHGFYITPDVGFDWVSGKGTPFYYFTYGAAFAEVEIDTLTGDFHTRTVD 1214
Query: 1216 VILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIP 1275
+++DLG S+NPAID+GQIEG FIQGLGW ALEELKWGD HKWI PG L+TCGPGSYKIP
Sbjct: 1215 IVMDLGCSINPAIDIGQIEGGFIQGLGWAALEELKWGDDNHKWIRPGHLFTCGPGSYKIP 1274
Query: 1276 SLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGW 1335
S+ND+PL F VSLLKG N K IHSSKAVGEPPFFL S+V FAIKDAISAARA+ GH W
Sbjct: 1275 SVNDIPLNFKVSLLKGVLNPKVIHSSKAVGEPPFFLGSAVLFAIKDAISAARAEEGHFDW 1334
Query: 1336 FPLDNPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
FPLD+PATPERIRMAC+D T F + YRPKLSV
Sbjct: 1335 FPLDSPATPERIRMACVDSITKKFASVYYRPKLSV 1369
|
Key enzyme involved in purine catabolism. Catalyzes the oxidation of hypoxanthine to xanthine and the oxidation of xanthine to urate. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|P47990|XDH_CHICK Xanthine dehydrogenase/oxidase OS=Gallus gallus GN=XDH PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1265 bits (3273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 661/1355 (48%), Positives = 896/1355 (66%), Gaps = 41/1355 (3%)
Query: 20 EAILYVNGLRKVLPDGLAHLTLLEYLR-DIGLTGTKLGCGEGGCGACTVMVSRYDKKSKK 78
E + +VNG + V D TLL YLR +GL GTKLGCGEGGCGACTVM+S+YD KK
Sbjct: 9 ELVFFVNGKKVVEKDVDPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMISKYDPFQKK 68
Query: 79 CVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSM 138
+H NACL P+ +L + V TVEG+GN K LHP QE + +SHGSQCGFCTPG +MSM
Sbjct: 69 ILHHTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFCTPGIVMSM 128
Query: 139 YSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDAL--YTNMSSMSLKE 196
Y+LLR+ P E+ IE++ GNLCRCTGYRPI++ +R FA ++ N + +
Sbjct: 129 YTLLRNKPKPKMED-IEDAFQGNLCRCTGYRPILEGYRTFAVDSNCCGKAANGTGCCHSK 187
Query: 197 GEF-----VCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIF 251
GE C C M N S+ ++P+ ++ E IF
Sbjct: 188 GENSMNGGCCGGKANGPGCCMNEKENVTMMSSSLFDSSEFQPLDPTQ---------EPIF 238
Query: 252 PPELLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKR 309
PPEL+ +++ F G + W +P LQ L+ LKS+YP++KL+VGNTEVGIEMRLK
Sbjct: 239 PPELMTQRNKEQKQVCFKGERVMWIQPTTLQELVALKSQYPNAKLVVGNTEVGIEMRLKN 298
Query: 310 MQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIE 369
M Y V+++ +PE+N + + G+ GAA L+ + ++ RK V E P+++T +A +E
Sbjct: 299 MLYPVILAPAWIPEMNAVQQTETGITFGAACTLSSVEEVLRKAVAELPSYKTEIFQAALE 358
Query: 370 QIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLG 429
Q++WFAG QI+NVA++GGNI TASPISDLNP+ MASG+K ++ +G M E+FF G
Sbjct: 359 QLRWFAGPQIRNVAALGGNIMTASPISDLNPVLMASGSKLTLISMEGKRTVMMDEKFFTG 418
Query: 430 YRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVS 489
YRK + E+LLS+ +P+++ E+ FKQA+RR+DDIA+V GMRV + V
Sbjct: 419 YRKTIVKPEEVLLSVEIPYSKEGEYFSAFKQAYRREDDIAIVTCGMRVLFQHGTSR--VQ 476
Query: 490 DALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKS 549
+ L YGG+AP ++ A KT + G+ W+++LLQ+A ++L ++ L APGGMV+FR++
Sbjct: 477 EVKLSYGGMAPTTILALKTCRELAGRDWNEKLLQDACRLLAGEMDLSPSAPGGMVEFRRT 536
Query: 550 LTLSFFFKFFLWV----SHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITKHGT 605
LTLSFFFKF+L V S G N++ E VP ++SA + FH+ I Q ++ G
Sbjct: 537 LTLSFFFKFYLTVLQKLSKDQNGPNNLCEPVPPNYISATELFHKDPIASTQLFQEVPRGQ 596
Query: 606 ----SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARS 661
+VG P VHLS+ Q GEA Y DD P N L+ LV S + HA+ILSID S A+S
Sbjct: 597 LVEDTVGRPLVHLSAAKQACGEAVYCDDIPHYENELYLTLVTSTQAHAKILSIDASEAQS 656
Query: 662 SPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQ 721
PGFV A+DV G N G + DE +FA +VVTCVG +IG V+A+T E ++ A++ V+
Sbjct: 657 VPGFVCFVSAKDVPGSNITG-IANDETVFAEDVVTCVGHIIGAVIADTQEHSRRAAKAVK 715
Query: 722 VEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFY 781
++YEEL I++IQEAI+ +SF +R +KGDV+ F+ + D I+EGE+ +GGQEHFY
Sbjct: 716 IKYEELKPIVTIQEAIEQQSFIKPIKR-IKKGDVNKGFE--ESDHILEGEMHIGGQEHFY 772
Query: 782 LEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKET 841
LE H ++ E+ + STQ K Q++ + LG+P +++V + KR+GGGFGGKET
Sbjct: 773 LETHCTLAVPKGEDGEMELFVSTQNLMKTQEFTASALGVPSNRIVVRVKRMGGGFGGKET 832
Query: 842 RSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEI 901
R+ + AV +F RPV LDRD DM+ISG RH FLG+YKVGF GK+ +L++
Sbjct: 833 RNTILTTVVAVAAFKTGRPVRCMLDRDEDMLISGGRHPFLGRYKVGFMKNGKIKSLEVSY 892
Query: 902 YNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLIT 961
Y+N GNS DLS V++RA+ H DN Y IPNV IMG +C TN SNTAFRGFGGPQGM+I
Sbjct: 893 YSNGGNSADLSHGVMDRALLHLDNSYNIPNVSIMGFICKTNLSSNTAFRGFGGPQGMMIA 952
Query: 962 ENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKE 1021
E W+ +A + PEE+R+IN EG + H+ Q+L+ TL W+E S ++ +K
Sbjct: 953 ECWMSDLARKCGLPPEEVRKINLYHEGDLTHFNQKLEGFTLRRCWDECLSSSNYHARKKL 1012
Query: 1022 VDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLH 1081
++ FN NRWKKRG+ ++PTKFGISFT+ +NQAGALVHVYTDG+VL+THGG EMGQGLH
Sbjct: 1013 IEEFNKQNRWKKRGMCIIPTKFGISFTVPFLNQAGALVHVYTDGSVLLTHGGTEMGQGLH 1072
Query: 1082 TKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEP 1141
TK+ QVA+ + IP S +++SETST+ VPN SPTAAS S+DI G AV +AC+ I R+EP
Sbjct: 1073 TKMIQVASRSLGIPTSKIYISETSTNTVPNTSPTAASVSADINGMAVHNACQTILKRLEP 1132
Query: 1142 IASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVE 1201
I + S+ + Y I LSA GFY P++ +++ T KG PF YF+YG A +EVE
Sbjct: 1133 IKQSNLKGSWEDWIKTAYENCISLSATGFYRIPDVGYNFETNKGKPFHYFSYGVACSEVE 1192
Query: 1202 IDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPP 1261
ID LTGD ++++D+G SLNPAID+GQIEGAF+QG+G +EEL++ P
Sbjct: 1193 IDCLTGDHKNIRTDIVMDVGTSLNPAIDIGQIEGAFVQGIGLFTMEELRYS-------PE 1245
Query: 1262 GCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKD 1321
G LYT GPG YKIP+ D+P +F VSLL+ PN KAI+SSKAVGEPP FL++SVF+AIKD
Sbjct: 1246 GNLYTRGPGMYKIPAFGDIPTEFYVSLLRDCPNSKAIYSSKAVGEPPLFLSASVFYAIKD 1305
Query: 1322 AISAARADAGHTGWFPLDNPATPERIRMACLDEFT 1356
AI +AR D+G T F LD+PATPERIR AC+D FT
Sbjct: 1306 AIYSAREDSGVTEPFRLDSPATPERIRNACVDTFT 1340
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Key enzyme in purine degradation. Catalyzes the oxidation of hypoxanthine to xanthine. Catalyzes the oxidation of xanthine to uric acid. Contributes to the generation of reactive oxygen species. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 1 EC: 7 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q54FB7|XDH_DICDI Xanthine dehydrogenase OS=Dictyostelium discoideum GN=xdh PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1259 bits (3259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/1374 (47%), Positives = 898/1374 (65%), Gaps = 71/1374 (5%)
Query: 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS---RYDKKS 76
+ + ++NG + ++ + L+ L+Y+R IGLTG K GC EG CG+CT M+S + D +
Sbjct: 19 QLLFFLNGEKVLINEPNPELSTLDYIRSIGLTGLKRGCSEGACGSCTFMLSNVVKDDNDT 78
Query: 77 KKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIM 136
+ VH AVN CL PL +L+GM V T+EG+GN GLH IQE + + GSQCGFCTPG IM
Sbjct: 79 FRIVHRAVNGCLYPLCALDGMAVTTIEGLGNIDKGLHSIQERISENSGSQCGFCTPGIIM 138
Query: 137 SMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK--TNDALYT----NMS 190
++Y+ LRS+ T++ IE++ GNLCRCTGYRPI+DA + FA +++ L M+
Sbjct: 139 ALYAFLRSNPNS-TQKDIEQNFDGNLCRCTGYRPILDAAKSFANQPSDEQLVELPLPPMA 197
Query: 191 SMSLK--EGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKE 248
++ K + + +CP TGKPC+C K ++ P E++ E
Sbjct: 198 TIDDKKDDTQMICPGTGKPCNCKTKT---------------SHIPNKPMELNS------E 236
Query: 249 LIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLK 308
IFPP L+ K L +G + WY P L+ LL++K + ++K++VGNTE+GIE R +
Sbjct: 237 PIFPPFLMEYKKESLKFTG-SRVTWYTPTTLEELLKIKKEKTNAKIVVGNTEIGIETRFR 295
Query: 309 RMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETS-----S 363
+ Y +I T V EL + +D+G+ +GA+V LTE+ ++ E + +
Sbjct: 296 SIVYPTIICPTRVEELIQIQKEDNGVRVGASVTLTEMKSYLNGIIKSSENDEIANKKNGT 355
Query: 364 CKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGN----IR 419
KA I Q+KWFAG Q++N AS+GGN+CTASPISDLNP+ +A+GA +V N R
Sbjct: 356 FKAIISQLKWFAGNQVRNAASIGGNLCTASPISDLNPVLLAAGAVLTMVSLDDNGAKVRR 415
Query: 420 TTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYL 479
+FFL YR VD+ EIL S+F+P+TRP EF++ +KQ+ RR+DDIA+V+ RV L
Sbjct: 416 QVPINQFFLRYRVVDIKPEEILESVFIPYTRPLEFIQAYKQSRRREDDIAIVSCCFRVLL 475
Query: 480 E--------EKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQT 531
E D + + D +L YGG+ +++ +KT+ ++G WS+ELL +A L++
Sbjct: 476 EPIAESASNTVDSNFKIKDCVLAYGGMNVKAVTCEKTEKQLIGSVWSRELLNDACLNLES 535
Query: 532 DIILKEDAPGGMVDFRKSLTLSFFFKFFLWVS---HQMEGKNSIKESVPSTHLSAMQSFH 588
D+ L APGGM+++R+SLT FFFK+FL VS +Q+ N + V SA ++
Sbjct: 536 DLPLAAGAPGGMIEYRRSLTTGFFFKYFLTVSKQLYQISNGNPLY-LVSDKEKSATDAYS 594
Query: 589 RPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPH 648
RP G Q+Y+ + P H S+ QVTGEA Y DD M L+A +V S + H
Sbjct: 595 RPLSFGEQNYQTQPDKHPITQPIKHQSADKQVTGEALYVDDVKM--KSLYAVMVPSLKAH 652
Query: 649 ARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAE 708
A I S+D S A +PG F A+D+ G N GPV+ DEE+F ++ G IG +VAE
Sbjct: 653 ANIKSVDASKALKAPGVKAFFSAKDIPGINDCGPVIHDEEVFVTKTALFHGAPIGCIVAE 712
Query: 709 THEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKII 768
TH +A AS+ V +EYEELPAI SI++AI +SF P T + GD++ + + D II
Sbjct: 713 THIQALEASKLVAIEYEELPAITSIEDAISKQSFFPFT-HLLKDGDMEKGWS--ESDHII 769
Query: 769 EGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCK 828
+GE +VG QEHFYLEP+ ++V G E+ +ISSTQ P K Q V+ VLG+ ++VVCK
Sbjct: 770 DGEFKVGAQEHFYLEPNGTLVIP-GEGKELTVISSTQNPTKTQAIVASVLGIGQNQVVCK 828
Query: 829 TKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGF 888
KR+GGGFGGKETRS F + AA+ S+ + PV + LDRD DM +G RH F+ +Y+VGF
Sbjct: 829 LKRLGGGFGGKETRSIFSSCVAAIASYHMKEPVRIILDRDTDMSTTGTRHPFIARYRVGF 888
Query: 889 TNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTA 948
T EG + ALDLE+Y +AG S D+S+ VL+RA+FHS+N Y+IPNV I+G +C TN PSNTA
Sbjct: 889 TKEGLIKALDLELYADAGFSYDISVGVLDRAIFHSENSYKIPNVNILGRLCKTNLPSNTA 948
Query: 949 FRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNE 1008
FRG+GGPQ M+I ENW+++++ + +IRE+NF E + Y Q + + + +W+E
Sbjct: 949 FRGYGGPQAMIICENWVEKISKTLGMDSYKIRELNFYKEAEVTAYRQSVVNNMMKRVWDE 1008
Query: 1009 LKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVL 1068
L + ++ V+ FN NR+KKRGI+++PTKFG+SFT+K +NQAGALVHVYTDGT+L
Sbjct: 1009 LMVKSNYHQRLIAVEKFNKENRYKKRGISIIPTKFGMSFTVKTLNQAGALVHVYTDGTIL 1068
Query: 1069 VTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAV 1128
VTHGG EMGQGL+TK+ Q+AA AFN+P+S VF+SETSTDKVPN +PTAAS SSD+ G AV
Sbjct: 1069 VTHGGTEMGQGLNTKMIQIAARAFNVPVSDVFISETSTDKVPNTAPTAASVSSDLNGMAV 1128
Query: 1129 LDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDF---DWITGKG 1185
LDAC+QI RMEPI K+ F +L + C+V+R++LSA+GFY TP + + D G+G
Sbjct: 1129 LDACQQILLRMEPIREKNPNVPFKQLCTLCFVERVNLSANGFYATPNVGYMFKDSGVGEG 1188
Query: 1186 NPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLA 1245
PF YF +GAA +EVEIDTLTGD T ++VILD+G SLNP ID+GQ+EGAF+QG+GW
Sbjct: 1189 TPFNYFNFGAACSEVEIDTLTGDHTTLRSDVILDVGDSLNPTIDIGQVEGAFVQGMGWST 1248
Query: 1246 LEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVG 1305
LEE+ P G ++T GP +YKIP NDVP++FNVSLL PN KAIHSSK VG
Sbjct: 1249 LEEV-------VTFPSGYMFTRGPSTYKIPGFNDVPIEFNVSLLGDAPNPKAIHSSKGVG 1301
Query: 1306 EPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPF 1359
EPP FL SSV+FAI+ AI+AAR + T WF L +PAT ERIR +CLD F F
Sbjct: 1302 EPPLFLGSSVYFAIRQAITAARLENNLTNWFDLQSPATCERIRTSCLDNFVLQF 1355
|
Key enzyme in purine degradation. Catalyzes the oxidation of hypoxanthine to xanthine. Catalyzes the oxidation of xanthine to uric acid. Dictyostelium discoideum (taxid: 44689) EC: 1 EC: . EC: 1 EC: 7 EC: . EC: 1 EC: . EC: 4 |
| >sp|P47989|XDH_HUMAN Xanthine dehydrogenase/oxidase OS=Homo sapiens GN=XDH PE=1 SV=4 | Back alignment and function description |
|---|
Score = 1217 bits (3150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/1351 (48%), Positives = 879/1351 (65%), Gaps = 58/1351 (4%)
Query: 22 ILYVNGLRKVLPDGLAHLTLLEYLR-DIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCV 80
+ +VNG + V + TLL YLR +GL+GTKLGCGEGGCGACTVM+S+YD+ K V
Sbjct: 7 VFFVNGRKVVEKNADPETTLLAYLRRKLGLSGTKLGCGEGGCGACTVMLSKYDRLQNKIV 66
Query: 81 HCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYS 140
H + NACLAP+ SL + V TVEG+G+ K LHP+QE + +SHGSQCGFCTPG +MSMY+
Sbjct: 67 HFSANACLAPICSLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYT 126
Query: 141 LLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEFV 200
LLR+ Q PT E+IE + GNLCRCTGYRPI+ FR FA+ + ++
Sbjct: 127 LLRN-QPEPTMEEIENAFQGNLCRCTGYRPILQGFRTFARDGGCCGGDGNN--------- 176
Query: 201 CPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLRKS 260
P C + ++ + S+ ++P ++ +D + +E IFPPELL K
Sbjct: 177 ------PNCCMNQKKDHSVSLSPSL-----FKPEEFTPLDPT----QEPIFPPELLRLKD 221
Query: 261 NPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISV 318
P F G + W + L+ LL+LK+++PD+KL+VGNTE+GIEM+ K M + +++
Sbjct: 222 TPRKQLRFEGERVTWIQASTLKELLDLKAQHPDAKLVVGNTEIGIEMKFKNMLFPMIVCP 281
Query: 319 THVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQ 378
+PELN + DG+ GAA L+ + K V + PA +T + +EQ++WFAG Q
Sbjct: 282 AWIPELNSVEHGPDGISFGAACPLSIVEKTLVDAVAKLPAQKTEVFRGVLEQLRWFAGKQ 341
Query: 379 IKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTT-MAEEFFLGYRKVDLTS 437
+K+VASVGGNI TASPISDLNP++MASGAK +V +G RT M FF GYRK L+
Sbjct: 342 VKSVASVGGNIITASPISDLNPVFMASGAKLTLVS-RGTRRTVQMDHTFFPGYRKTLLSP 400
Query: 438 GEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGG 497
EILLSI +P++R E+ FKQA RR+DDIA V +GMRV + E V + L YGG
Sbjct: 401 EEILLSIEIPYSREGEYFSAFKQASRREDDIAKVTSGMRVLFKPGTTE--VQELALCYGG 458
Query: 498 VAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFK 557
+A ++SA KT + K W +ELLQ+ L ++ L DAPGGMVDFR +LTLSFFFK
Sbjct: 459 MANRTISALKTTQRQLSKLWKEELLQDVCAGLAEELHLPPDAPGGMVDFRCTLTLSFFFK 518
Query: 558 FFLWVSHQMEGKNSIKES---VPSTHLSAMQSFHRPSIIGNQDYEITKHGTS----VGSP 610
F+L V ++ G+ ++++ + T SA F + Q ++ G S VG P
Sbjct: 519 FYLTVLQKL-GQENLEDKCGKLDPTFASATLLFQKDPPADVQLFQEVPKGQSEEDMVGRP 577
Query: 611 EVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFF 670
HL++ +Q +GEA Y DD P N L LV S R HA+I SID S A+ PGFV
Sbjct: 578 LPHLAADMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKIKSIDTSEAKKVPGFVCFIS 637
Query: 671 AEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAI 730
A+DV G N G + DE +FA + VTCVG +IG VVA+T E + A++ V++ YEELPAI
Sbjct: 638 ADDVPGSNITG-ICNDETVFAKDKVTCVGHIIGAVVADTPEHTQRAAQGVKITYEELPAI 696
Query: 731 LSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVW 790
++I++AI SF+ E KGD+ F + D ++ GE+ +GGQEHFYLE H ++
Sbjct: 697 ITIEDAIKNNSFY-GPELKIEKGDLKKGFS--EADNVVSGEIYIGGQEHFYLETHCTIAV 753
Query: 791 TMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAA 850
E+ + STQ K Q +V+ +LG+P +++V + KR+GGGFGGKETRS ++ A
Sbjct: 754 PKGEAGEMELFVSTQNTMKTQSFVAKMLGVPANRIVVRVKRMGGGFGGKETRSTVVSTAV 813
Query: 851 AVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLD 910
A+ ++ RPV LDRD DM+I+G RH FL +YKVGF G V+AL+++ ++N GN+ D
Sbjct: 814 ALAAYKTGRPVRCMLDRDEDMLITGGRHPFLARYKVGFMKTGTVVALEVDHFSNVGNTQD 873
Query: 911 LSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAV 970
LS +++ERA+FH DN Y+IPN+R G +C TN PSNTAFRGFGGPQGMLI E W+ VAV
Sbjct: 874 LSQSIMERALFHMDNCYKIPNIRGTGRLCKTNLPSNTAFRGFGGPQGMLIAECWMSEVAV 933
Query: 971 EVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNR 1030
EE+R N EG + H+ Q+L+ TL W E S + + EVD FN N
Sbjct: 934 TCGMPAEEVRRKNLYKEGDLTHFNQKLEGFTLPRCWEECLASSQYHARKSEVDKFNKENC 993
Query: 1031 WKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAAS 1090
WKKRG+ ++PTKFGISFT+ +NQAGAL+HVYTDG+VL+THGG EMGQGLHTK+ QVA+
Sbjct: 994 WKKRGLCIIPTKFGISFTVPFLNQAGALLHVYTDGSVLLTHGGTEMGQGLHTKMVQVASR 1053
Query: 1091 AFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNS 1150
A IP S +++SETST+ VPN SPTAAS S+D+ G AV AC+ I R+EP K+ S
Sbjct: 1054 ALKIPTSKIYISETSTNTVPNTSPTAASVSADLNGQAVYAACQTILKRLEPYKKKNPSGS 1113
Query: 1151 FAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFH 1210
+ + +A Y+ + LSA GFY TP + + + T GNPF YF+YG A +EVEID LTGD
Sbjct: 1114 WEDWVTAAYMDTVSLSATGFYRTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTGDHK 1173
Query: 1211 TRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPG 1270
++++D+G SLNPAID+GQ+EGAF+QGLG LEEL + P G L+T GP
Sbjct: 1174 NLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYS-------PEGSLHTRGPS 1226
Query: 1271 SYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADA 1330
+YKIP+ +P++F VSLL+ PN KAI++SKAVGEPP FLA+S+FFAIKDAI AARA
Sbjct: 1227 TYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKAVGEPPLFLAASIFFAIKDAIRAARAQ- 1285
Query: 1331 GHTG-----WFPLDNPATPERIRMACLDEFT 1356
HTG F LD+PATPE+IR AC+D+FT
Sbjct: 1286 -HTGNNVKELFRLDSPATPEKIRNACVDKFT 1315
|
Key enzyme in purine degradation. Catalyzes the oxidation of hypoxanthine to xanthine. Catalyzes the oxidation of xanthine to uric acid. Contributes to the generation of reactive oxygen species. Has also low oxidase activity towards aldehydes (in vitro). Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 1 EC: 7 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9MYW6|XDH_FELCA Xanthine dehydrogenase/oxidase OS=Felis catus GN=XDH PE=2 SV=3 | Back alignment and function description |
|---|
Score = 1212 bits (3136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1349 (48%), Positives = 866/1349 (64%), Gaps = 52/1349 (3%)
Query: 20 EAILYVNGLRKVLPDGLAHLTLLEYLR-DIGLTGTKLGCGEGGCGACTVMVSRYDKKSKK 78
E + +VNG + V + TLL YLR +GL+GTKLGCGEGGCGACTVM+S+YD+ K
Sbjct: 5 ELVFFVNGKKVVEKNADPETTLLAYLRRKLGLSGTKLGCGEGGCGACTVMLSKYDRFQNK 64
Query: 79 CVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSM 138
VH + NACLAP+ SL + V TVEG+G+ K LHP+QE + +SHGSQCGFCTPG +MSM
Sbjct: 65 IVHFSANACLAPICSLHHVAVTTVEGIGSTKSRLHPVQERIAKSHGSQCGFCTPGIVMSM 124
Query: 139 YSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGE 198
Y+LLR+ Q PT E+IE++ GNLCRCTGYRPI+ FR FA+
Sbjct: 125 YTLLRN-QPEPTIEEIEDAFQGNLCRCTGYRPILQGFRTFARDGGC-------------- 169
Query: 199 FVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLR 258
C +G +C M N T K + P ++ +D + +E IFPPELL
Sbjct: 170 --CGGSGNDLNCCM----NQKTDHKITLSPSLFNPEEFTPLDPT----QEPIFPPELLRL 219
Query: 259 KSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLI 316
K P F G + W + LQ LL+LK++ P++KL+VGNTE+GIEM+ K M + ++
Sbjct: 220 KDTPQKQLRFEGERVTWIQASTLQELLDLKAQDPEAKLVVGNTEIGIEMKFKNMLFPKMV 279
Query: 317 SVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAG 376
+PE + +G+ GA+ L+ + K V PAH+T K +EQ++WFAG
Sbjct: 280 CPAWIPE--PVEHGPEGISFGASCPLSLVEKTLLDAVANLPAHQTEVFKGVLEQLRWFAG 337
Query: 377 TQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLT 436
Q+K+VAS+GGNI TASPISDLNP++MASGAK IV M FF YRK L
Sbjct: 338 KQVKSVASIGGNIITASPISDLNPVFMASGAKLTIVSTGTRRTVRMDHTFFPAYRKTLLA 397
Query: 437 SGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYG 496
EILLSI +P++R E+ FKQA RR+DDIA V +GMRV + V + L YG
Sbjct: 398 PEEILLSIEIPYSREGEYFSAFKQASRREDDIAKVTSGMRVLFNPGTAQ--VKELALCYG 455
Query: 497 GVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFF 556
G+ ++SA +T + W++ELLQN L ++ L DAPGGMV+FR++LTLSFFF
Sbjct: 456 GMHDRTVSALQTTRKQISNFWNEELLQNVCAGLAEELSLAPDAPGGMVEFRRTLTLSFFF 515
Query: 557 KFFLWVSHQMEGKNSIKE--SVPSTHLSAMQSFHRPSIIGNQDYEITKHGTS----VGSP 610
KF+L V ++ +NS + + TH SA F + Q ++ G VG P
Sbjct: 516 KFYLTVLQKLGIQNSKDKCGKLDPTHASATLLFQKDPPANVQLFQEVPKGQCEEDMVGRP 575
Query: 611 EVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFF 670
HL++ +Q +GEA Y DD P N L LV S R HA+I SID S A+ PGFV
Sbjct: 576 LPHLAAAMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKIKSIDTSEAQKVPGFVCFIS 635
Query: 671 AEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAI 730
A+DV G N G + DE +FA + VTC+G +IG VV +T E A+ A++ V++ YE+LPAI
Sbjct: 636 ADDVPGSNITG-IGNDEMVFAKDKVTCIGHIIGAVVTDTREHAQRAAQAVRITYEDLPAI 694
Query: 731 LSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVW 790
++I++AI SF+ E KG++ F + D I+ GE+ +GGQEHFYLE H ++
Sbjct: 695 ITIEDAIAKDSFY-EPELKIEKGNLTKGFS--EADNIVSGELYIGGQEHFYLETHCTIAV 751
Query: 791 TMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAA 850
E+ + STQ K Q +V+++LG+P ++++ + KR+GGGFGGKETRS ++ A
Sbjct: 752 PKGEAGEMELFVSTQNTTKTQSFVANMLGVPANRILVRVKRMGGGFGGKETRSTVVSTAV 811
Query: 851 AVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLD 910
+ ++ RPV LDRD DM+I+G RH FL +YKVGF G+V+AL +E Y+NAGN+LD
Sbjct: 812 PLAAYKTGRPVRCMLDRDEDMLITGGRHPFLARYKVGFMKTGRVVALKVEHYSNAGNTLD 871
Query: 911 LSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAV 970
LS +++ERA+FH DN Y IPN+R G +C TN PSNTAFRGFGGPQGMLI E+W+ VAV
Sbjct: 872 LSQSIMERALFHMDNCYNIPNIRGTGRICKTNLPSNTAFRGFGGPQGMLIAEHWMSEVAV 931
Query: 971 EVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNR 1030
EE+R N EG + H+ Q+L+ TL W E S + ++E D FN N
Sbjct: 932 TCGLPAEEVRRKNMYKEGDLTHFNQKLEGFTLPRCWEECLASSQYHARKREADKFNEENC 991
Query: 1031 WKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAAS 1090
WKKRG++++PTKFGISFT+ +NQAGALVHVYTDG+VL+THGG EMGQGLHTK+ QVA+
Sbjct: 992 WKKRGLSIIPTKFGISFTVPFLNQAGALVHVYTDGSVLLTHGGTEMGQGLHTKMVQVASR 1051
Query: 1091 AFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNS 1150
A IP S +++SETST+ VPN SPTAAS S+DI G AV +AC+ I R+EP K+ S
Sbjct: 1052 ALKIPTSKIYISETSTNTVPNTSPTAASVSTDINGQAVYEACQTILKRLEPFKKKNPSGS 1111
Query: 1151 FAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFH 1210
+ + +A Y+ + LSA GFY TP I + + T GNPF YF+YG A +EVEID LTGD
Sbjct: 1112 WEDWVTAAYLDAVSLSATGFYKTPNIGYSFETNSGNPFHYFSYGVACSEVEIDCLTGDHK 1171
Query: 1211 TRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPG 1270
++++D+G SLNPAID+GQ+EGAF+QGLG LEEL + P G L+T GP
Sbjct: 1172 NLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYS-------PEGSLHTRGPS 1224
Query: 1271 SYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARA-- 1328
+YKIP+ +P +F VSLL+ PN KAI++SKAVGEPP FLA+S+FFAIKDAI AARA
Sbjct: 1225 TYKIPAFGSIPSEFRVSLLRDCPNKKAIYASKAVGEPPLFLAASIFFAIKDAICAARAGN 1284
Query: 1329 -DAGHTGWFPLDNPATPERIRMACLDEFT 1356
D F L++PATPE+IR AC+D+FT
Sbjct: 1285 PDCKTKKLFQLNSPATPEKIRNACVDQFT 1313
|
Key enzyme in purine degradation. Catalyzes the oxidation of hypoxanthine to xanthine. Catalyzes the oxidation of xanthine to uric acid. Contributes to the generation of reactive oxygen species. Felis catus (taxid: 9685) EC: 1 EC: . EC: 1 EC: 7 EC: . EC: 3 EC: . EC: 2 |
| >sp|P22985|XDH_RAT Xanthine dehydrogenase/oxidase OS=Rattus norvegicus GN=Xdh PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1200 bits (3104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 646/1350 (47%), Positives = 870/1350 (64%), Gaps = 54/1350 (4%)
Query: 20 EAILYVNGLRKVLPDGLAHLTLLEYLR-DIGLTGTKLGCGEGGCGACTVMVSRYDKKSKK 78
E + +VNG + V + TLL YLR +GL GTKLGCGEGGCGACTVM+S+YD+ K
Sbjct: 5 ELVFFVNGKKVVEKNADPETTLLVYLRRKLGLCGTKLGCGEGGCGACTVMISKYDRLQNK 64
Query: 79 CVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSM 138
VH +VNACLAP+ SL + V TVEG+GN + LHP+QE + RSHGSQCGFCTPG +MSM
Sbjct: 65 IVHFSVNACLAPICSLHHVAVTTVEGIGNTQK-LHPVQERIARSHGSQCGFCTPGIVMSM 123
Query: 139 YSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGE 198
Y+LLR+ Q PT E+IE + GNLCRCTGYRPI+ FR FAK + ++
Sbjct: 124 YTLLRN-QPEPTVEEIENAFQGNLCRCTGYRPILQGFRTFAKDGGCCGGSGNN------- 175
Query: 199 FVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLR 258
P C + + S+ + P + +D + +E IFPPELL
Sbjct: 176 --------PNCCMNQTKDQTVSLSPSL-----FNPEDFKPLDPT----QEPIFPPELLRL 218
Query: 259 KSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLI 316
K P F G + W + ++ LL+LK+++PD+KL+VGNTE+GIEM+ K M + +++
Sbjct: 219 KDTPQKKLRFEGERVTWIQASTMEELLDLKAQHPDAKLVVGNTEIGIEMKFKNMLFPLIV 278
Query: 317 SVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAG 376
+PELN + +G+ GA+ L+ + + + + + P +T + +EQ++WFAG
Sbjct: 279 CPAWIPELNSVVHGPEGISFGASCPLSLVESVLAEEIAKLPEQKTEVFRGVMEQLRWFAG 338
Query: 377 TQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTT-MAEEFFLGYRKVDL 435
Q+K+VAS+GGNI TASPISDLNP++MASGAK +V +G RT M FF GYRK L
Sbjct: 339 KQVKSVASIGGNIITASPISDLNPVFMASGAKLTLVS-RGTRRTVRMDHTFFPGYRKTLL 397
Query: 436 TSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVY 495
EILLSI +P+++ EF FKQA RR+DDIA V +GMRV + E V + L +
Sbjct: 398 RPEEILLSIEIPYSKEGEFFSAFKQASRREDDIAKVTSGMRVLFKPGTIE--VQELSLCF 455
Query: 496 GGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFF 555
GG+A ++SA KT + KSW++ELLQ+ L ++ L DAPGGMV+FR++LTLSFF
Sbjct: 456 GGMADRTISALKTTPKQLSKSWNEELLQSVCAGLAEELQLAPDAPGGMVEFRRTLTLSFF 515
Query: 556 FKFFLWVSHQMEGKNSIKE---SVPSTHLSAMQSFHRPSIIGNQDYEITKHGTS----VG 608
FKF+L V ++ G+ +++ + T SA F + Q ++ S VG
Sbjct: 516 FKFYLTVLQKL-GRADLEDMCGKLDPTFASATLLFQKDPPANVQLFQEVPKDQSEEDMVG 574
Query: 609 SPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGI 668
P HL++ +Q +GEA Y DD P N L LV S R HA+I SID S A+ PGFV
Sbjct: 575 RPLPHLAANMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKITSIDTSEAKKVPGFVCF 634
Query: 669 FFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELP 728
AEDV N G + DE +FA + VTCVG +IG VVA+T E A+ A+R V++ YE+LP
Sbjct: 635 LTAEDVPNSNATG-LFNDETVFAKDEVTCVGHIIGAVVADTPEHAQRAARGVKITYEDLP 693
Query: 729 AILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSV 788
AI++IQ+AI+ SF+ +E KGD+ F + D ++ GE+ +GGQEHFYLE + ++
Sbjct: 694 AIITIQDAINNNSFY-GSEIKIEKGDLKKGFS--EADNVVSGELYIGGQEHFYLETNCTI 750
Query: 789 VWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAA 848
E+ + STQ K Q +V+ +LG+P +++V + KR+GGGFGGKETRS ++
Sbjct: 751 AVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPDNRIVVRVKRMGGGFGGKETRSTVVST 810
Query: 849 AAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNS 908
A A+ + RPV LDRD DM+I+G RH FL KYKVGF G V+AL++ ++N GN+
Sbjct: 811 ALALAAHKTGRPVRCMLDRDEDMLITGGRHPFLAKYKVGFMKTGTVVALEVAHFSNGGNT 870
Query: 909 LDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRV 968
DLS +++ERA+FH DN Y+IPN+R G +C TN PSNTAFRGFGGPQGMLI E W+ V
Sbjct: 871 EDLSRSIMERALFHMDNAYKIPNIRGTGRICKTNLPSNTAFRGFGGPQGMLIAEYWMSEV 930
Query: 969 AVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLN 1028
A+ EE+R N EG + H+ Q+L+ TL W+E S +L ++EV+ FN
Sbjct: 931 AITCGLPAEEVRRKNMYKEGDLTHFNQKLEGFTLPRCWDECIASSQYLARKREVEKFNRE 990
Query: 1029 NRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVA 1088
N WKKRG+ ++PTKFGISFTL +NQ GALVHVYTDG+VL+THGG EMGQGLHTK+ QVA
Sbjct: 991 NCWKKRGLCIIPTKFGISFTLPFLNQGGALVHVYTDGSVLLTHGGTEMGQGLHTKMVQVA 1050
Query: 1089 ASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNF 1148
+ A IP S + +SETST+ VPN SPTAASAS+D+ G V +AC+ I R+EP K
Sbjct: 1051 SRALKIPTSKIHISETSTNTVPNTSPTAASASADLNGQGVYEACQTILKRLEPFKKKKPT 1110
Query: 1149 NSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGD 1208
+ Y + LSA GFY TP + + + T GNPF YF+YG A +EVEID LTGD
Sbjct: 1111 GPWEAWVMDAYTSAVSLSATGFYKTPNLGYSFETNSGNPFHYFSYGVACSEVEIDCLTGD 1170
Query: 1209 FHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCG 1268
++++D+G SLNPAID+GQ+EGAF+QGLG +EEL + P G L+T G
Sbjct: 1171 HKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTMEELHYS-------PEGSLHTRG 1223
Query: 1269 PGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARA 1328
P +YKIP+ +P++F VSLL+ PN +AI++SKAVGEPP FLASS+FFAIKDAI AARA
Sbjct: 1224 PSTYKIPAFGSIPIEFRVSLLRDCPNKRAIYASKAVGEPPLFLASSIFFAIKDAIRAARA 1283
Query: 1329 DAGHTG--WFPLDNPATPERIRMACLDEFT 1356
G F LD+PATPE+IR AC+D+FT
Sbjct: 1284 QHGDNAKQLFQLDSPATPEKIRNACVDQFT 1313
|
Key enzyme in purine degradation. Catalyzes the oxidation of hypoxanthine to xanthine. Catalyzes the oxidation of xanthine to uric acid. Contributes to the generation of reactive oxygen species. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 1 EC: 7 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q00519|XDH_MOUSE Xanthine dehydrogenase/oxidase OS=Mus musculus GN=Xdh PE=1 SV=5 | Back alignment and function description |
|---|
Score = 1196 bits (3095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/1355 (47%), Positives = 866/1355 (63%), Gaps = 63/1355 (4%)
Query: 20 EAILYVNGLRKVLPDGLAHLTLLEYLR-DIGLTGTKLGCGEGGCGACTVMVSRYDKKSKK 78
E + +VNG + V + TLL YLR +GL GTKLGCGEGGCGACTVM+S+YD+ K
Sbjct: 8 ELVFFVNGKKVVEKNADPETTLLVYLRRKLGLCGTKLGCGEGGCGACTVMISKYDRLQNK 67
Query: 79 CVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSM 138
VH +VNACL P+ SL + V TVEG+GN K LHP+QE + +SHGSQCGFCTPG +MSM
Sbjct: 68 IVHFSVNACLTPICSLHHVAVTTVEGIGNTKK-LHPVQERIAKSHGSQCGFCTPGIVMSM 126
Query: 139 YSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSS----MSL 194
Y+LLR+ + PT E+IE + GNLCRCTGYRPI+ FR FAK + ++ MS
Sbjct: 127 YTLLRN-KPEPTVEEIENAFQGNLCRCTGYRPILQGFRTFAKDGGCCGGSGNNPNCCMSQ 185
Query: 195 KEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPE 254
+ + + PS+ + P + +D + +E IFPPE
Sbjct: 186 TKDQTIAPSSS------------------------LFNPEDFKPLDPT----QEPIFPPE 217
Query: 255 LLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQY 312
LL K P F G + W + ++ LL+LK+++PD+KL+VGNTE+GIEM+ K M +
Sbjct: 218 LLRLKDTPRKTLRFEGERVTWIQVSTMEELLDLKAQHPDAKLVVGNTEIGIEMKFKNMLF 277
Query: 313 QVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIK 372
++I + EL + +G+ GAA L+ + + + P T + +EQ++
Sbjct: 278 PLIICPAWILELTSVAHGPEGISFGAACPLSLVESVLADAIATLPEQRTEVFRGVMEQLR 337
Query: 373 WFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTT-MAEEFFLGYR 431
WFAG Q+K+VAS+GGNI TASPISDLNP+ MAS AK + +G RT M FF GYR
Sbjct: 338 WFAGKQVKSVASIGGNIITASPISDLNPVLMASRAKLTLAS-RGTKRTVWMDHTFFPGYR 396
Query: 432 KVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDA 491
+ L+ EIL+SI +P++R EF FKQA RR+DDIA V +GMRV + E V +
Sbjct: 397 RTLLSPEEILVSIVIPYSRKGEFFSAFKQASRREDDIAKVTSGMRVLFKPGTTE--VQEL 454
Query: 492 LLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLT 551
L +GG+A ++SA KT + KSW++ELLQ+ L ++ L DAPGGMV+FR++LT
Sbjct: 455 SLCFGGMADRTVSALKTTPKQLSKSWNEELLQDVCAGLAEELHLAPDAPGGMVEFRRTLT 514
Query: 552 LSFFFKFFLWVSHQMEGKNSIKE---SVPSTHLSAMQSFHRPSIIGNQDYEITKHGTS-- 606
LSFFFKF+L V ++ G+ ++ + T SA F + Q ++ G S
Sbjct: 515 LSFFFKFYLTVLQKL-GRADLEGMCGKLDPTFASATLLFQKDPPANVQLFQEVPKGQSEE 573
Query: 607 --VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPG 664
VG P HL++ +Q +GEA Y DD P N L LV S R HA+I+SID S A+ PG
Sbjct: 574 DMVGRPMPHLAADMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKIMSIDTSEAKKVPG 633
Query: 665 FVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEY 724
FV +EDV G N G + DE +FA + VTCVG +IG VVA+T E A A+R V++ Y
Sbjct: 634 FVCFLTSEDVPGSNITG-IFNDETVFAKDEVTCVGHIIGAVVADTPEHAHRAARGVKITY 692
Query: 725 EELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEP 784
E+LPAI++IQ+AI SF+ E KGD+ F + D ++ GE+ +GGQEHFYLE
Sbjct: 693 EDLPAIITIQDAIKNNSFY-GPEVKIEKGDLKKGFS--EADNVVSGELYIGGQEHFYLET 749
Query: 785 HSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSA 844
H ++ E+ + STQ K Q +++ +LG+P +++V + KR+GGGFGGKETRS
Sbjct: 750 HCTIAVPKGEAGEMELFVSTQNTMKTQSFIAKMLGVPDNRIVVRVKRMGGGFGGKETRST 809
Query: 845 FIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNN 904
I+ A A+ ++ RPV LDRD DM+I+G RH FL KYKVGF G ++AL++ ++N
Sbjct: 810 LISTAVALAAYKTGRPVRCMLDRDEDMLITGGRHPFLAKYKVGFMKTGTIVALEVAHFSN 869
Query: 905 AGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENW 964
GNS DLS +++ERA+FH DN Y+IPN+R G +C TN PSNTAFRGFGGPQGMLI E W
Sbjct: 870 GGNSEDLSRSIMERAVFHMDNAYKIPNIRGTGRICKTNLPSNTAFRGFGGPQGMLIAEYW 929
Query: 965 IQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDN 1024
+ VAV EE+R N EG + H+ Q+L+ TL W+E S + + EV+
Sbjct: 930 MSEVAVTCGLPAEEVRRKNMYKEGDLTHFNQKLEGFTLPRCWDECIASSQYQARKMEVEK 989
Query: 1025 FNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKV 1084
FN N WKKRG+ ++PTKFGISFTL +NQ GALVHVYTDG+VL+THGG EMGQGLHTK+
Sbjct: 990 FNRENCWKKRGLCIIPTKFGISFTLSFLNQGGALVHVYTDGSVLLTHGGTEMGQGLHTKM 1049
Query: 1085 AQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIAS 1144
QVA+ A IP S + ++ETST+ VPN SPTAASAS+D+ G A+ +AC+ I R+EP
Sbjct: 1050 VQVASRALKIPTSKIHITETSTNTVPNTSPTAASASADLNGQAIYEACQTILKRLEPFKK 1109
Query: 1145 KHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDT 1204
K+ S+ Y + LSA GFY TP + + + T GNPF YF+YG A +EVEID
Sbjct: 1110 KNPSGSWESWVMDAYTSAVSLSATGFYKTPNLGYSFETNSGNPFHYFSYGVACSEVEIDC 1169
Query: 1205 LTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCL 1264
LTGD ++++D+G SLNPAID+GQ+EGAF+QGLG +EEL + P G L
Sbjct: 1170 LTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTMEELHYS-------PEGSL 1222
Query: 1265 YTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAIS 1324
+T GP +YKIP+ +P++F VSLL+ PN +AI++SKAVGEPP FLASS+FFAIKDAI
Sbjct: 1223 HTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKRAIYASKAVGEPPLFLASSIFFAIKDAIR 1282
Query: 1325 AARADAGHTG---WFPLDNPATPERIRMACLDEFT 1356
AARA G + F LD+PATPE+IR AC+D+FT
Sbjct: 1283 AARAQHGDSNAKQLFQLDSPATPEKIRNACVDQFT 1317
|
Key enzyme in purine degradation. Catalyzes the oxidation of hypoxanthine to xanthine. Catalyzes the oxidation of xanthine to uric acid. Contributes to the generation of reactive oxygen species. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 1 EC: 7 EC: . EC: 3 EC: . EC: 2 |
| >sp|P80457|XDH_BOVIN Xanthine dehydrogenase/oxidase OS=Bos taurus GN=XDH PE=1 SV=4 | Back alignment and function description |
|---|
Score = 1191 bits (3080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/1356 (47%), Positives = 873/1356 (64%), Gaps = 65/1356 (4%)
Query: 20 EAILYVNGLRKVLPDGLAHLTLLEYLR-DIGLTGTKLGCGEGGCGACTVMVSRYDKKSKK 78
E + +VNG + V + TLL YLR +GL GTKLGCGEGGCGACTVM+S+YD+ K
Sbjct: 5 ELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDK 64
Query: 79 CVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSM 138
+H + NACLAP+ +L + V TVEG+G+ K LHP+QE + +SHGSQCGFCTPG +MSM
Sbjct: 65 IIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSM 124
Query: 139 YSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSS----MSL 194
Y+LLR+ Q PT E+IE++ GNLCRCTGYRPI+ FR FAK N ++ M+
Sbjct: 125 YTLLRN-QPEPTVEEIEDAFQGNLCRCTGYRPILQGFRTFAKNGGCCGGNGNNPNCCMNQ 183
Query: 195 KEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPE 254
K+ V S + P + +D + +E IFPPE
Sbjct: 184 KKDHTVTLSPS------------------------LFNPEEFMPLDPT----QEPIFPPE 215
Query: 255 LLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQY 312
LL K P F G + W + L+ LL+LK+++P++KL+VGNTE+GIEM+ K +
Sbjct: 216 LLRLKDVPPKQLRFEGERVTWIQASTLKELLDLKAQHPEAKLVVGNTEIGIEMKFKNQLF 275
Query: 313 QVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIK 372
++I +PELN + +G+ GAA L+ + K + V + P +T + +EQ++
Sbjct: 276 PMIICPAWIPELNAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLR 335
Query: 373 WFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTT-MAEEFFLGYR 431
WFAG Q+K+VAS+GGNI TASPISDLNP++MASG K IV +G RT M FF YR
Sbjct: 336 WFAGKQVKSVASLGGNIITASPISDLNPVFMASGTKLTIVS-RGTRRTVPMDHTFFPSYR 394
Query: 432 KVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDA 491
K L EILLSI +P++R EF FKQA RR+DDIA V GMRV + + V +
Sbjct: 395 KTLLGPEEILLSIEIPYSREDEFFSAFKQASRREDDIAKVTCGMRVLFQPGSMQ--VKEL 452
Query: 492 LLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLT 551
L YGG+A ++SA KT + K W+++LLQ+ L ++ L DAPGGM++FR++LT
Sbjct: 453 ALCYGGMADRTISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLT 512
Query: 552 LSFFFKFFLWVSHQMEGKNSIKE--SVPSTHLSAMQSFHRPSIIGNQDYEITKHGTS--- 606
LSFFFKF+L V ++ GK+S + + T+ SA F + Q ++ +G S
Sbjct: 513 LSFFFKFYLTVLKKL-GKDSKDKCGKLDPTYTSATLLFQKDPPANIQLFQEVPNGQSKED 571
Query: 607 -VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGF 665
VG P HL++ +Q +GEA Y DD P N L LV S R HA+I SID S A+ PGF
Sbjct: 572 TVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGF 631
Query: 666 VGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYE 725
V A+D+ G N G + DE +FA + VTCVG +IG VVA+T E A+ A+ V+V YE
Sbjct: 632 VCFLSADDIPGSNETG-LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTYE 690
Query: 726 ELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPH 785
+LPAI++I++AI SF+ +E KGD+ F + D ++ GE+ +GGQ+HFYLE H
Sbjct: 691 DLPAIITIEDAIKNNSFY-GSELKIEKGDLKKGFS--EADNVVSGELYIGGQDHFYLETH 747
Query: 786 SSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAF 845
++ E+ + STQ K Q +V+ +LG+P+++++ + KR+GGGFGGKETRS
Sbjct: 748 CTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTL 807
Query: 846 IAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNA 905
++ A A+ ++ PV LDR+ DM+I+G RH FL +YKVGF G ++AL+++ Y+NA
Sbjct: 808 VSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNA 867
Query: 906 GNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWI 965
GNS DLS +++ERA+FH DN Y+IPN+R G +C TN SNTAFRGFGGPQ + I ENW+
Sbjct: 868 GNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWM 927
Query: 966 QRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNF 1025
VAV EE+R N EG + H+ Q+L+ ++ W+E S + + EVD F
Sbjct: 928 SEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKF 987
Query: 1026 NLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVA 1085
N N WKKRG+ ++PTKFGISFT+ +NQAGAL+HVYTDG+VLV+HGG EMGQGLHTK+
Sbjct: 988 NKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMV 1047
Query: 1086 QVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK 1145
QVA+ A IP+S +++SETST+ VPN+SPTAAS S+DIYG AV +AC+ I R+EP K
Sbjct: 1048 QVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKK 1107
Query: 1146 HNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTL 1205
+ S+ + A Y R+ LS GFY TP + + + T GN F YFTYG A +EVEID L
Sbjct: 1108 NPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCL 1167
Query: 1206 TGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLY 1265
TGD ++++D+G SLNPAID+GQ+EGAF+QGLG LEEL + P G L+
Sbjct: 1168 TGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYS-------PEGSLH 1220
Query: 1266 TCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISA 1325
T GP +YKIP+ +P +F VSLL+ PN KAI++SKAVGEPP FL +SVFFAIKDAI A
Sbjct: 1221 TRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRA 1280
Query: 1326 ARADAGHTG-----WFPLDNPATPERIRMACLDEFT 1356
ARA HT F LD+PATPE+IR AC+D+FT
Sbjct: 1281 ARAQ--HTNNNTKELFRLDSPATPEKIRNACVDKFT 1314
|
Key enzyme in purine degradation. Catalyzes the oxidation of hypoxanthine to xanthine. Catalyzes the oxidation of xanthine to uric acid. Contributes to the generation of reactive oxygen species. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 1 EC: 7 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1370 | ||||||
| 224106165 | 1368 | xanthine dehydrogenase [Populus trichoca | 0.998 | 1.0 | 0.838 | 0.0 | |
| 255544848 | 1366 | xanthine dehydrogenase, putative [Ricinu | 0.997 | 1.0 | 0.837 | 0.0 | |
| 374095611 | 1369 | xanthine dehydrogenase [Camellia sinensi | 0.999 | 1.0 | 0.819 | 0.0 | |
| 225435470 | 1369 | PREDICTED: xanthine dehydrogenase/oxidas | 0.999 | 1.0 | 0.818 | 0.0 | |
| 225435472 | 1358 | PREDICTED: xanthine dehydrogenase/oxidas | 0.986 | 0.994 | 0.820 | 0.0 | |
| 356550325 | 1358 | PREDICTED: xanthine dehydrogenase-like [ | 0.990 | 0.999 | 0.803 | 0.0 | |
| 357454311 | 1358 | Xanthine dehydrogenase/oxidase [Medicago | 0.991 | 1.0 | 0.805 | 0.0 | |
| 449442519 | 1368 | PREDICTED: xanthine dehydrogenase 1-like | 0.998 | 1.0 | 0.793 | 0.0 | |
| 449476051 | 1368 | PREDICTED: LOW QUALITY PROTEIN: xanthine | 0.998 | 1.0 | 0.791 | 0.0 | |
| 30690157 | 1361 | xanthine dehydrogenase 1 [Arabidopsis th | 0.993 | 1.0 | 0.776 | 0.0 |
| >gi|224106165|ref|XP_002314067.1| xanthine dehydrogenase [Populus trichocarpa] gi|222850475|gb|EEE88022.1| xanthine dehydrogenase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 2402 bits (6226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1149/1370 (83%), Positives = 1252/1370 (91%), Gaps = 2/1370 (0%)
Query: 1 MGSLKNEEEMEQMGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEG 60
MGSLKNEEEME +G +K+AILYVNG+R+VL DGLAHLTLLEYLRDIGLTGTKLGCGEG
Sbjct: 1 MGSLKNEEEMEPIGGESSKDAILYVNGVRRVLSDGLAHLTLLEYLRDIGLTGTKLGCGEG 60
Query: 61 GCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLV 120
GCGACTVMVS Y+K KKCVH AVNACLAPLYS+EGMH+ITVEGVGNRK GLHPIQESL
Sbjct: 61 GCGACTVMVSHYNKVLKKCVHYAVNACLAPLYSVEGMHIITVEGVGNRKIGLHPIQESLA 120
Query: 121 RSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
RSHGSQCGFCTPGFIMSMY+LLRSS+ PPTEEQIEE LAGNLCRCTGYRPI+DAF+VFAK
Sbjct: 121 RSHGSQCGFCTPGFIMSMYALLRSSEVPPTEEQIEECLAGNLCRCTGYRPIIDAFQVFAK 180
Query: 181 TNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEID 240
T+DA YTN SS SL+ GEF+CPSTGKPCSC K++S A TC++S A G YEPVSYSE+D
Sbjct: 181 TDDAFYTNTSSSSLQSGEFLCPSTGKPCSCKSKSLSGAGTCKQSTANGNKYEPVSYSEVD 240
Query: 241 GSTYTEKELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTE 300
GSTYT+KELIFPPELLLRK LNL+GFGGLKW+RPLK+QHLLELK+KYPD+KL++GNTE
Sbjct: 241 GSTYTDKELIFPPELLLRKLTALNLNGFGGLKWFRPLKIQHLLELKAKYPDAKLVMGNTE 300
Query: 301 VGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHE 360
VGIEMRLKR+QY+VLISV HVPELNVLNVKDDGLEIGAAVRL ELL+MFRKVV ER AHE
Sbjct: 301 VGIEMRLKRIQYKVLISVAHVPELNVLNVKDDGLEIGAAVRLMELLQMFRKVVNERAAHE 360
Query: 361 TSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRT 420
TSSCKAFIEQIKWFAGTQIKNVA VGGNICTASPISDLNPLWMA+GAKF I+DCKGNIRT
Sbjct: 361 TSSCKAFIEQIKWFAGTQIKNVACVGGNICTASPISDLNPLWMAAGAKFQIIDCKGNIRT 420
Query: 421 TMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLE 480
MAE FFLGYRKVDL SGEILLSIFLPWTRP E VKEFKQAHRRDDDIA+VNAGMRV+LE
Sbjct: 421 IMAENFFLGYRKVDLASGEILLSIFLPWTRPLEHVKEFKQAHRRDDDIAIVNAGMRVFLE 480
Query: 481 EKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAP 540
EK E+ VVSDAL+VYGGVAPLSLSA KTK FI+GK W QELLQ ALK L+ DI LKEDAP
Sbjct: 481 EKGEDLVVSDALIVYGGVAPLSLSAVKTKEFIIGKKWDQELLQGALKFLEIDIFLKEDAP 540
Query: 541 GGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEI 600
GGMV+FRKSLTLSFFFKFFLWVS Q+ K S +P ++LSA Q F RPSI+G+QDYEI
Sbjct: 541 GGMVEFRKSLTLSFFFKFFLWVSQQISVKKST--GIPLSYLSAAQPFQRPSIMGSQDYEI 598
Query: 601 TKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGAR 660
KHGTSVGSPE+HLSSRLQVTGEAEY DD PMP N LHAALVLSR+PHA+ILSIDDS A+
Sbjct: 599 RKHGTSVGSPEIHLSSRLQVTGEAEYADDAPMPSNGLHAALVLSRKPHAKILSIDDSEAK 658
Query: 661 SSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKV 720
S PG GIF A+DV GDN IG ++ DEELFA++ VTCVGQVIGVVVA+THE AKLA+ KV
Sbjct: 659 SLPGVAGIFLAKDVPGDNHIGAIIHDEELFATKYVTCVGQVIGVVVADTHENAKLAAAKV 718
Query: 721 QVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHF 780
VEYEELPAILSIQEA+DAKSFHPN+E+C +KGDVD+CFQSGQCDKII GEV VGGQEHF
Sbjct: 719 VVEYEELPAILSIQEAVDAKSFHPNSEKCLKKGDVDVCFQSGQCDKIIHGEVHVGGQEHF 778
Query: 781 YLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 840
YLE SS+VWTMD GNEVHMISSTQAPQKHQ+YV+ VLGLPMSKVVCKTKRIGGGFGGKE
Sbjct: 779 YLETQSSLVWTMDCGNEVHMISSTQAPQKHQQYVAQVLGLPMSKVVCKTKRIGGGFGGKE 838
Query: 841 TRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLE 900
TRSAFIAAAA+VPS+LLNRPV LTLDRD+DMMI+GQRH+FLGKYKVGFT EG++LALDLE
Sbjct: 839 TRSAFIAAAASVPSYLLNRPVKLTLDRDVDMMITGQRHAFLGKYKVGFTKEGRLLALDLE 898
Query: 901 IYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLI 960
IYNNAGNSLDLSL+VLERAMFHSDNVYEIPN+R++G VCFTNFPS+TAFRGFGGPQGMLI
Sbjct: 899 IYNNAGNSLDLSLSVLERAMFHSDNVYEIPNIRVLGRVCFTNFPSHTAFRGFGGPQGMLI 958
Query: 961 TENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARK 1020
ENWIQ++AVE+ KSPEEIREINFQGEGSILHY QQLQHCTL LWNELKLS D L A +
Sbjct: 959 AENWIQKIAVELNKSPEEIREINFQGEGSILHYSQQLQHCTLGQLWNELKLSSDLLRALE 1018
Query: 1021 EVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1080
+V FNL NRWKKRG+AMVPTKFGISFT K MNQAGALVHVYTDGTVLVTHGGVEMGQGL
Sbjct: 1019 DVKQFNLQNRWKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1078
Query: 1081 HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARME 1140
HTKVAQVAASAFNIPLSSVF+SETSTDKVPN SPTAASASSD+YGAAVLDACEQIKARME
Sbjct: 1079 HTKVAQVAASAFNIPLSSVFISETSTDKVPNTSPTAASASSDLYGAAVLDACEQIKARME 1138
Query: 1141 PIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1200
P+A KHNF+SFAELA ACY+Q+IDLSAHGFYITP+I FDW TGKGNPF YFTYGAAFAEV
Sbjct: 1139 PVALKHNFSSFAELAGACYMQQIDLSAHGFYITPDIGFDWTTGKGNPFNYFTYGAAFAEV 1198
Query: 1201 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIP 1260
EIDTLTGDFHTR AN+ILDLGYS+NPAIDVGQIEGAF+QGLGW+A+EELKWGDAAHKWIP
Sbjct: 1199 EIDTLTGDFHTRTANIILDLGYSINPAIDVGQIEGAFVQGLGWVAIEELKWGDAAHKWIP 1258
Query: 1261 PGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIK 1320
PGCLYT GPGSYKIPS+NDVP KF+VSLLKGHPNVKAIHSSKAVGEPPFFLAS+VFFAIK
Sbjct: 1259 PGCLYTSGPGSYKIPSMNDVPFKFSVSLLKGHPNVKAIHSSKAVGEPPFFLASAVFFAIK 1318
Query: 1321 DAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
DAI AARA+ GH WFPLDNPATPERIRMACLDEF+ FI+S++RPKLSV
Sbjct: 1319 DAIIAARAEVGHHEWFPLDNPATPERIRMACLDEFSTRFIDSDFRPKLSV 1368
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255544848|ref|XP_002513485.1| xanthine dehydrogenase, putative [Ricinus communis] gi|223547393|gb|EEF48888.1| xanthine dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 2397 bits (6212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1148/1370 (83%), Positives = 1262/1370 (92%), Gaps = 4/1370 (0%)
Query: 1 MGSLKNEEEMEQMGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEG 60
MGSL++E E+E+ KEAILYVNG+R+VLPDGLAHLTL+EYLRDIGLTGTKLGCGEG
Sbjct: 1 MGSLRSEGEIEESA----KEAILYVNGVRRVLPDGLAHLTLIEYLRDIGLTGTKLGCGEG 56
Query: 61 GCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLV 120
GCGACTVMVS YD+K KCVH A+NACLAPLYS+EGMHVITVEGVGNRK GLHPIQESL
Sbjct: 57 GCGACTVMVSYYDRKLNKCVHYAINACLAPLYSVEGMHVITVEGVGNRKSGLHPIQESLA 116
Query: 121 RSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
R HGSQCGFCTPGFIMSMY+LLRSSQ PPT EQIEE LAGNLCRCTGYRPIVDAF+VFAK
Sbjct: 117 RGHGSQCGFCTPGFIMSMYALLRSSQEPPTAEQIEECLAGNLCRCTGYRPIVDAFQVFAK 176
Query: 181 TNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEID 240
+NDALYT+ S++SL+EGE VCPSTGKPCSC K V + C++S ACG + +P+SYSE++
Sbjct: 177 SNDALYTDHSALSLEEGESVCPSTGKPCSCKSKTVIDPGNCKRSAACGDSCKPISYSEVN 236
Query: 241 GSTYTEKELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTE 300
GSTYT+KELIFPPELLLRK PL+LSGFGGLKWYRPL++QHLLELK+KYP +KLL+GNTE
Sbjct: 237 GSTYTDKELIFPPELLLRKLTPLSLSGFGGLKWYRPLRVQHLLELKAKYPAAKLLIGNTE 296
Query: 301 VGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHE 360
VGIEMRLKR+QYQVLISV HVPELNVL VKDDGLEIGAAVRLTELLKM RKVV ER HE
Sbjct: 297 VGIEMRLKRIQYQVLISVAHVPELNVLTVKDDGLEIGAAVRLTELLKMLRKVVNERATHE 356
Query: 361 TSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRT 420
SSCKA IEQ+KWFAGTQIKNVASVGGNICTASPISDLNPLWMA+ AKF I+DCKGN RT
Sbjct: 357 MSSCKALIEQLKWFAGTQIKNVASVGGNICTASPISDLNPLWMAARAKFQIIDCKGNRRT 416
Query: 421 TMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLE 480
T+AE FFLGYRKVDL S E+LLSIFLPWTRPFE VKEFKQAHRRDDDIA+VNAGMRV+LE
Sbjct: 417 TLAENFFLGYRKVDLASDEVLLSIFLPWTRPFEHVKEFKQAHRRDDDIAIVNAGMRVFLE 476
Query: 481 EKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAP 540
EK + WVVSDA +VYGGVAPL+LSA KTK F++GK+W+QELL+ LK+L+TDI+LKEDAP
Sbjct: 477 EKGDHWVVSDASIVYGGVAPLTLSAAKTKKFLIGKNWNQELLEGVLKVLETDILLKEDAP 536
Query: 541 GGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEI 600
GGMV+FRKSL LSFFFKFFLWVSHQM+GK SI+ ++PS+HLSA+Q FHRPS++G QDYEI
Sbjct: 537 GGMVEFRKSLILSFFFKFFLWVSHQMDGKKSIRATIPSSHLSAVQPFHRPSVVGCQDYEI 596
Query: 601 TKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGAR 660
KHGT+VGSPEVHLSSRLQVTGEAEY DDT M N LHAALVLS++PHARI+SIDDS A+
Sbjct: 597 RKHGTAVGSPEVHLSSRLQVTGEAEYVDDTLMSSNGLHAALVLSKKPHARIVSIDDSEAK 656
Query: 661 SSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKV 720
SSPGF GIFFA+D+ GDN IG ++ADEELFASE VTCVGQVIGVVVA+THE AK+A+ KV
Sbjct: 657 SSPGFAGIFFAKDIPGDNHIGAIIADEELFASEFVTCVGQVIGVVVADTHENAKMAATKV 716
Query: 721 QVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHF 780
VEYEELPAILSIQEA+DA+SFHPN+E+C +KGDV++CF SGQCD+IIEGEV+VGGQEHF
Sbjct: 717 YVEYEELPAILSIQEAVDAESFHPNSEKCLKKGDVELCFHSGQCDRIIEGEVQVGGQEHF 776
Query: 781 YLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 840
YLEP S+VWTMD GNEVHMISSTQAPQKHQKYV+HVLGLPMSKVVC+TKRIGGGFGGKE
Sbjct: 777 YLEPQGSLVWTMDSGNEVHMISSTQAPQKHQKYVAHVLGLPMSKVVCRTKRIGGGFGGKE 836
Query: 841 TRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLE 900
TRSAF+AA A++PS+LLNRPV +TLDRD DMMI+GQRHSFLGKYKVGFTNEGKVLALDL+
Sbjct: 837 TRSAFLAAVASIPSYLLNRPVKITLDRDADMMITGQRHSFLGKYKVGFTNEGKVLALDLK 896
Query: 901 IYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLI 960
IYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRI+G VCFTNFPSNTAFRGFGGPQGM+I
Sbjct: 897 IYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRILGKVCFTNFPSNTAFRGFGGPQGMII 956
Query: 961 TENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARK 1020
ENWIQR+AVE+ KSPE+IREINFQG+GSILHYGQQLQ+CTL LWNELKLSC+ L AR+
Sbjct: 957 AENWIQRIAVELNKSPEDIREINFQGDGSILHYGQQLQYCTLAQLWNELKLSCNLLKARE 1016
Query: 1021 EVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1080
E FNL+NRWKKRG+AMVPTKFGISFT KLMNQAGALVHVYTDGTVLVTHGGVEMGQGL
Sbjct: 1017 EAIQFNLHNRWKKRGVAMVPTKFGISFTAKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1076
Query: 1081 HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARME 1140
HTKVAQVAASAFNIPLSSVF+SETSTDKVPN+SPTAASASSD+YGAAVLDACEQIKARME
Sbjct: 1077 HTKVAQVAASAFNIPLSSVFISETSTDKVPNSSPTAASASSDLYGAAVLDACEQIKARME 1136
Query: 1141 PIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1200
P+ASKHNF+SFAELASACYVQRIDLSAHGFYITPEI FDW TGKGNPFRYFTYGAAFAEV
Sbjct: 1137 PVASKHNFSSFAELASACYVQRIDLSAHGFYITPEIGFDWSTGKGNPFRYFTYGAAFAEV 1196
Query: 1201 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIP 1260
EIDTLTGDFHTR AN+I+DLGYSLNPAIDVGQIEGAFIQGLGW ALEELKWGD+AHKWIP
Sbjct: 1197 EIDTLTGDFHTRAANIIMDLGYSLNPAIDVGQIEGAFIQGLGWAALEELKWGDSAHKWIP 1256
Query: 1261 PGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIK 1320
PGCLYTCGPGSYKIPSLNDVP KF+VSLLKGHPN AIHSSKAVGEPPFFLAS+VFFAIK
Sbjct: 1257 PGCLYTCGPGSYKIPSLNDVPFKFSVSLLKGHPNATAIHSSKAVGEPPFFLASAVFFAIK 1316
Query: 1321 DAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
DAI AARA+ H WFPLDNPATPERIRMACLDE TA FI S+YRPKLSV
Sbjct: 1317 DAIIAARAEVEHHEWFPLDNPATPERIRMACLDEITARFIKSDYRPKLSV 1366
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|374095611|gb|AEY85033.1| xanthine dehydrogenase [Camellia sinensis] | Back alignment and taxonomy information |
|---|
Score = 2348 bits (6084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1123/1370 (81%), Positives = 1249/1370 (91%), Gaps = 1/1370 (0%)
Query: 1 MGSLKNEEEMEQMGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEG 60
MGSLK E E++ +GE +KE ILYVNG+R+VLPDGLAHLTLLEYLRD+GLTGTKLGCGEG
Sbjct: 1 MGSLKQEHELDTIGEE-SKEPILYVNGVRRVLPDGLAHLTLLEYLRDVGLTGTKLGCGEG 59
Query: 61 GCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLV 120
GCGACTVMVS +D+ SKKCVH AVNACLAPLYS+EGMHVITVEGVGNR++GLHP+QESL
Sbjct: 60 GCGACTVMVSYFDENSKKCVHYAVNACLAPLYSVEGMHVITVEGVGNRRYGLHPVQESLA 119
Query: 121 RSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
SHGSQCGFCTPGFIMSMY+LLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAF+VFAK
Sbjct: 120 VSHGSQCGFCTPGFIMSMYALLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFQVFAK 179
Query: 181 TNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEID 240
TND LYT+ S S GEFVCPSTGKPCSCG + V DT E+ ACG+ YEP+SYSEID
Sbjct: 180 TNDMLYTDASLSSTPRGEFVCPSTGKPCSCGSETVCKDDTNEQKTACGERYEPISYSEID 239
Query: 241 GSTYTEKELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTE 300
G YT KELIFP EL+LRK L+L G GGLKWYRPL+LQH+L+LKS+YPD+KL++GNTE
Sbjct: 240 GKMYTNKELIFPSELVLRKLTYLSLKGSGGLKWYRPLRLQHVLDLKSRYPDAKLVIGNTE 299
Query: 301 VGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHE 360
+GIEMRLK +QYQVL+ V VPELN L++KDDGLEIGAAVRL+EL K+FRK +R HE
Sbjct: 300 IGIEMRLKGIQYQVLVCVACVPELNKLSIKDDGLEIGAAVRLSELSKVFRKANKQRADHE 359
Query: 361 TSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRT 420
TSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMA+GAKF IVDC+GNIRT
Sbjct: 360 TSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMAAGAKFQIVDCQGNIRT 419
Query: 421 TMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLE 480
AE FFLGYRKVDL S EILLS+FLPWTRPFEFVKEFKQAHRRDDDIA+VNAG+RV LE
Sbjct: 420 VAAENFFLGYRKVDLASTEILLSVFLPWTRPFEFVKEFKQAHRRDDDIAIVNAGIRVCLE 479
Query: 481 EKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAP 540
EK+E+WVVSDA + YGGVAPLSLSA KTK +++ K+W+ ELLQ ALK+L+ DI++K+DAP
Sbjct: 480 EKNEKWVVSDASIAYGGVAPLSLSATKTKDYLIAKTWNNELLQGALKVLEKDILIKKDAP 539
Query: 541 GGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEI 600
GGMV+FR+SLTLSFFFKFFLWVSHQMEGK+S ESV +HLSA+QSFHRPS+IG+Q+Y+I
Sbjct: 540 GGMVEFRRSLTLSFFFKFFLWVSHQMEGKSSFTESVSLSHLSAVQSFHRPSVIGSQNYDI 599
Query: 601 TKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGAR 660
K GT+VGSPEVHLS+RLQVTGEAEYTDDTPMPP LH AL+LS++PHARILSIDDSGA+
Sbjct: 600 IKQGTAVGSPEVHLSARLQVTGEAEYTDDTPMPPAGLHGALILSQKPHARILSIDDSGAK 659
Query: 661 SSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKV 720
SSPGF GIFFA+DV GDN IGPV++DEELFA+E VTCVGQ IGVVVA+T++ AKLA+RKV
Sbjct: 660 SSPGFAGIFFAKDVPGDNMIGPVISDEELFATEFVTCVGQAIGVVVADTYQHAKLAARKV 719
Query: 721 QVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHF 780
++YEELPAILSI++A+ SFHPNTERC KGDVD+CFQ GQCD+IIEGEV++GGQEHF
Sbjct: 720 HIQYEELPAILSIEDAVKCNSFHPNTERCLEKGDVDLCFQLGQCDRIIEGEVQIGGQEHF 779
Query: 781 YLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 840
YLEP S++VWTMD GNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE
Sbjct: 780 YLEPQSNLVWTMDGGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 839
Query: 841 TRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLE 900
TRSAF+AA A+VPS+LLNRPV LTLDRDIDMMI+GQRHSFLGKYKVGF N+GKVLALDLE
Sbjct: 840 TRSAFLAAVASVPSYLLNRPVKLTLDRDIDMMITGQRHSFLGKYKVGFKNDGKVLALDLE 899
Query: 901 IYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLI 960
IYNNAGNSLDLSLA+LERAMFHSDNVYEIPNV+I G VCFTNFPSNTAFRGFGGPQGMLI
Sbjct: 900 IYNNAGNSLDLSLAILERAMFHSDNVYEIPNVKINGRVCFTNFPSNTAFRGFGGPQGMLI 959
Query: 961 TENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARK 1020
TENWIQR+A+E++KSPEEIREINF EGS+LH+GQQ+QHCTL LWNELK SCDFL ARK
Sbjct: 960 TENWIQRIALELKKSPEEIREINFLSEGSVLHFGQQIQHCTLQRLWNELKSSCDFLKARK 1019
Query: 1021 EVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1080
EV+ FN +NRWKKRG+AMVPTKFGISFT K MNQAGALV VYTDGTVLVTHGGVEMGQGL
Sbjct: 1020 EVEKFNFHNRWKKRGVAMVPTKFGISFTTKFMNQAGALVQVYTDGTVLVTHGGVEMGQGL 1079
Query: 1081 HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARME 1140
HTKVAQVAAS+FNIPLSSVF+SETSTDKVPNASPTAASASSD+YGAAVLDACEQIKARME
Sbjct: 1080 HTKVAQVAASSFNIPLSSVFISETSTDKVPNASPTAASASSDMYGAAVLDACEQIKARME 1139
Query: 1141 PIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1200
P+ SK FNSFAELA+ACY++RIDLSAHGFYITP+I FDW TGKGNPFRYFTYGAAFAEV
Sbjct: 1140 PVTSKQKFNSFAELATACYMERIDLSAHGFYITPDIGFDWKTGKGNPFRYFTYGAAFAEV 1199
Query: 1201 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIP 1260
EIDTLTGDFHTR AN+ LDLGYS+NPAIDVGQIEGAFIQG+GW+ALEELKWGDAAH+WI
Sbjct: 1200 EIDTLTGDFHTRTANIFLDLGYSINPAIDVGQIEGAFIQGMGWVALEELKWGDAAHRWIR 1259
Query: 1261 PGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIK 1320
PG LYTCGPGSYKIPSLNDVP KF++SLLK PNV AIHSSKAVGEPPFFLASSVFFAIK
Sbjct: 1260 PGSLYTCGPGSYKIPSLNDVPFKFSISLLKDAPNVTAIHSSKAVGEPPFFLASSVFFAIK 1319
Query: 1321 DAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
DAI AARA+AG+ WFPLDNPATPERIRMAC DEFT F+NS++RPKLSV
Sbjct: 1320 DAIIAARAEAGYNNWFPLDNPATPERIRMACADEFTTRFVNSDFRPKLSV 1369
|
Source: Camellia sinensis Species: Camellia sinensis Genus: Camellia Family: Theaceae Order: Ericales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225435470|ref|XP_002285473.1| PREDICTED: xanthine dehydrogenase/oxidase-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2334 bits (6048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1122/1370 (81%), Positives = 1250/1370 (91%), Gaps = 1/1370 (0%)
Query: 1 MGSLKNEEEMEQMGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEG 60
MGSLKNEEE+E + EG +KEAILYVNG+RKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEG
Sbjct: 1 MGSLKNEEELEGVEEG-SKEAILYVNGVRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEG 59
Query: 61 GCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLV 120
GCGACTVMVS +D+ SKKCVH AVNACLAPLYS+EGMHVITVEG+GNR++GLHPIQESL
Sbjct: 60 GCGACTVMVSYFDENSKKCVHYAVNACLAPLYSVEGMHVITVEGIGNRRNGLHPIQESLA 119
Query: 121 RSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
SHGSQCGFCTPGFIMSMY+LLRSSQTPP+EEQIEESLAGNLCRCTGYRPI+DAFRVFAK
Sbjct: 120 LSHGSQCGFCTPGFIMSMYALLRSSQTPPSEEQIEESLAGNLCRCTGYRPIIDAFRVFAK 179
Query: 181 TNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEID 240
T+D LYT+ SS+SL+EGEF+CPSTGKPCSC + ++ D + +++C YEP+SYSEI
Sbjct: 180 TDDVLYTDRSSLSLQEGEFICPSTGKPCSCKSGSSNDKDAAKSNMSCVDRYEPISYSEIQ 239
Query: 241 GSTYTEKELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTE 300
GSTYTEKELIFPPELLLRK PLN++GFGGLKWYRPL L+HLLELK++YPD+KL+VGN+E
Sbjct: 240 GSTYTEKELIFPPELLLRKLTPLNMNGFGGLKWYRPLGLKHLLELKARYPDAKLVVGNSE 299
Query: 301 VGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHE 360
VGIEMRLKR+Q+QVLISV ++PEL +L+VKDDGLEIGAAVRL+ L + RKV+ +R A+E
Sbjct: 300 VGIEMRLKRIQHQVLISVINIPELTMLSVKDDGLEIGAAVRLSSLQNLLRKVLADRVAYE 359
Query: 361 TSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRT 420
TS+CKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMA+GAKF +++CKGNIRT
Sbjct: 360 TSACKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMAAGAKFRVINCKGNIRT 419
Query: 421 TMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLE 480
+AE FFLGYRKVDL EILLSIFLPWTRPFEFVKEFKQAHRRDDDIA+VNAGMRVYL+
Sbjct: 420 VLAENFFLGYRKVDLAHDEILLSIFLPWTRPFEFVKEFKQAHRRDDDIAIVNAGMRVYLQ 479
Query: 481 EKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAP 540
EK+E+WVVSDA + YGGVAPLSLSA KTK F++GK W++ELLQ+ALKILQ +I++K+DAP
Sbjct: 480 EKEEKWVVSDASIAYGGVAPLSLSASKTKDFLIGKIWNRELLQDALKILQKNILIKDDAP 539
Query: 541 GGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEI 600
GGMV+FRKSLTLSFFFKFFLWVSHQM+G+ E+VP +HLSA+Q FHRPS+ G QDYE+
Sbjct: 540 GGMVEFRKSLTLSFFFKFFLWVSHQMDGQRFFLETVPISHLSAVQPFHRPSVTGMQDYEV 599
Query: 601 TKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGAR 660
KHGT+VGSPE+HLSS+LQVTGEAEY DD PMPPN LHAALVLSR+PHARILSIDDSGA+
Sbjct: 600 VKHGTAVGSPEIHLSSKLQVTGEAEYADDMPMPPNGLHAALVLSRKPHARILSIDDSGAK 659
Query: 661 SSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKV 720
SSPGF GIFF +DV G N IGPVV DEE+FASE VT VGQVIGVVVA+T E AKLA+RKV
Sbjct: 660 SSPGFAGIFFHKDVPGGNAIGPVVNDEEIFASEFVTFVGQVIGVVVADTQENAKLAARKV 719
Query: 721 QVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHF 780
V+YEELPAILSI++A+ AKSF PNTER KGDVD+CFQSG CDKI+EGEV VGGQEHF
Sbjct: 720 HVKYEELPAILSIEDALKAKSFLPNTERHIEKGDVDLCFQSGCCDKILEGEVHVGGQEHF 779
Query: 781 YLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 840
YLE +SS+VWT D GNEVHMISSTQ PQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE
Sbjct: 780 YLETNSSLVWTTDSGNEVHMISSTQCPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 839
Query: 841 TRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLE 900
TRSA AA A VPS+LLNRPV LTLDRDIDMMISGQRH+FLGKYKVGFTN+GKV ALDLE
Sbjct: 840 TRSACFAAVACVPSYLLNRPVKLTLDRDIDMMISGQRHTFLGKYKVGFTNDGKVQALDLE 899
Query: 901 IYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLI 960
IYNN GNSLDLS AVLERAMFHSDNVY+IPNVRI G VC TNFPS+TAFRGFGGPQGMLI
Sbjct: 900 IYNNGGNSLDLSGAVLERAMFHSDNVYDIPNVRINGKVCLTNFPSHTAFRGFGGPQGMLI 959
Query: 961 TENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARK 1020
TENWIQR+A E++KSPEEIREINFQ EG + HYGQQLQH TL +WNELK SC+FL AR
Sbjct: 960 TENWIQRIATELKKSPEEIREINFQSEGCVTHYGQQLQHFTLPRVWNELKSSCEFLKARG 1019
Query: 1021 EVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1080
EVD FNL NRWKKRG+AMVPTKFGISFT K MNQAGALVHVYTDGTVLVTHGGVEMGQGL
Sbjct: 1020 EVDQFNLQNRWKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1079
Query: 1081 HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARME 1140
HTKVAQVAAS+FNIPLSSVF+SETSTDKVPN++PTAASASSD+YGAAVLDACEQIKARME
Sbjct: 1080 HTKVAQVAASSFNIPLSSVFISETSTDKVPNSTPTAASASSDMYGAAVLDACEQIKARME 1139
Query: 1141 PIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1200
PIASK NF+SFAEL +ACY++RIDLSAHGFYITP+I FDW TGKG+PF YFTYGA+FAEV
Sbjct: 1140 PIASKRNFSSFAELVTACYLERIDLSAHGFYITPDIHFDWKTGKGSPFSYFTYGASFAEV 1199
Query: 1201 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIP 1260
EIDTLTGDFHTR+ANV LDLG+S+NPAIDVGQIEGAF+QGLGW+ALEELKWGDAAHKWIP
Sbjct: 1200 EIDTLTGDFHTRVANVFLDLGHSINPAIDVGQIEGAFVQGLGWVALEELKWGDAAHKWIP 1259
Query: 1261 PGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIK 1320
PGCLYTCGPGSYKIPS+NDVPLKF+VSLLKG PN KAIHSSKAVGEPPFFLASSVFFAIK
Sbjct: 1260 PGCLYTCGPGSYKIPSINDVPLKFDVSLLKGAPNPKAIHSSKAVGEPPFFLASSVFFAIK 1319
Query: 1321 DAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
DAI AAR + G+ WFPLDNPATPER+RMACLDEF F++S++RPKLSV
Sbjct: 1320 DAIVAARREVGNKDWFPLDNPATPERVRMACLDEFAMQFVSSDFRPKLSV 1369
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225435472|ref|XP_002285474.1| PREDICTED: xanthine dehydrogenase/oxidase-like isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2326 bits (6028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1109/1351 (82%), Positives = 1234/1351 (91%)
Query: 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKC 79
EAILYVNG+RKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS +D+ SKKC
Sbjct: 8 EAILYVNGVRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSYFDENSKKC 67
Query: 80 VHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMY 139
VH AVNACLAPLYS+EGMHVITVEG+GNR++GLHPIQESL SHGSQCGFCTPGFIMSMY
Sbjct: 68 VHYAVNACLAPLYSVEGMHVITVEGIGNRRNGLHPIQESLALSHGSQCGFCTPGFIMSMY 127
Query: 140 SLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEF 199
+LLRSSQTPP+EEQIEESLAGNLCRCTGYRPI+DAFRVFAKT+D LYT+ SS+SL+EGEF
Sbjct: 128 ALLRSSQTPPSEEQIEESLAGNLCRCTGYRPIIDAFRVFAKTDDVLYTDRSSLSLQEGEF 187
Query: 200 VCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLRK 259
+CPSTGKPCSC + ++ D + +++C YEP+SYSEI GSTYTEKELIFPPELLLRK
Sbjct: 188 ICPSTGKPCSCKSGSSNDKDAAKSNMSCVDRYEPISYSEIQGSTYTEKELIFPPELLLRK 247
Query: 260 SNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVT 319
PLN++GFGGLKWYRPL L+HLLELK++YPD+KL+VGN+EVGIEMRLKR+Q+QVLISV
Sbjct: 248 LTPLNMNGFGGLKWYRPLGLKHLLELKARYPDAKLVVGNSEVGIEMRLKRIQHQVLISVI 307
Query: 320 HVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQI 379
++PEL +L+VKDDGLEIGAAVRL+ L + RKV+ +R A+ETS+CKAFIEQIKWFAGTQI
Sbjct: 308 NIPELTMLSVKDDGLEIGAAVRLSSLQNLLRKVLADRVAYETSACKAFIEQIKWFAGTQI 367
Query: 380 KNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGE 439
KNVASVGGNICTASPISDLNPLWMA+GAKF +++CKGNIRT +AE FFLGYRKVDL E
Sbjct: 368 KNVASVGGNICTASPISDLNPLWMAAGAKFRVINCKGNIRTVLAENFFLGYRKVDLAHDE 427
Query: 440 ILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVA 499
ILLSIFLPWTRPFEFVKEFKQAHRRDDDIA+VNAGMRVYL+EK+E+WVVSDA + YGGVA
Sbjct: 428 ILLSIFLPWTRPFEFVKEFKQAHRRDDDIAIVNAGMRVYLQEKEEKWVVSDASIAYGGVA 487
Query: 500 PLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFF 559
PLSLSA KTK F++GK W++ELLQ+ALKILQ +I++K+DAPGGMV+FRKSLTLSFFFKFF
Sbjct: 488 PLSLSASKTKDFLIGKIWNRELLQDALKILQKNILIKDDAPGGMVEFRKSLTLSFFFKFF 547
Query: 560 LWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQ 619
LWVSHQM+G+ E+VP +HLSA+Q FHRPS+ G QDYE+ KHGT+VGSPE+HLSS+LQ
Sbjct: 548 LWVSHQMDGQRFFLETVPISHLSAVQPFHRPSVTGMQDYEVVKHGTAVGSPEIHLSSKLQ 607
Query: 620 VTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR 679
VTGEAEY DD PMPPN LHAALVLSR+PHARILSIDDSGA+SSPGF GIFF +DV G N
Sbjct: 608 VTGEAEYADDMPMPPNGLHAALVLSRKPHARILSIDDSGAKSSPGFAGIFFHKDVPGGNA 667
Query: 680 IGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDA 739
IGPVV DEE+FASE VT VGQVIGVVVA+T E AKLA+RKV V+YEELPAILSI++A+ A
Sbjct: 668 IGPVVNDEEIFASEFVTFVGQVIGVVVADTQENAKLAARKVHVKYEELPAILSIEDALKA 727
Query: 740 KSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVH 799
KSF PNTER KGDVD+CFQSG CDKI+EGEV VGGQEHFYLE +SS+VWT D GNEVH
Sbjct: 728 KSFLPNTERHIEKGDVDLCFQSGCCDKILEGEVHVGGQEHFYLETNSSLVWTTDSGNEVH 787
Query: 800 MISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNR 859
MISSTQ PQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSA AA A VPS+LLNR
Sbjct: 788 MISSTQCPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSACFAAVACVPSYLLNR 847
Query: 860 PVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERA 919
PV LTLDRDIDMMISGQRH+FLGKYKVGFTN+GKV ALDLEIYNN GNSLDLS AVLERA
Sbjct: 848 PVKLTLDRDIDMMISGQRHTFLGKYKVGFTNDGKVQALDLEIYNNGGNSLDLSGAVLERA 907
Query: 920 MFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEI 979
MFHSDNVY+IPNVRI G VC TNFPS+TAFRGFGGPQGMLITENWIQR+A E++KSPEEI
Sbjct: 908 MFHSDNVYDIPNVRINGKVCLTNFPSHTAFRGFGGPQGMLITENWIQRIATELKKSPEEI 967
Query: 980 REINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMV 1039
REINFQ EG + HYGQQLQH TL +WNELK SC+FL AR EVD FNL NRWKKRG+AMV
Sbjct: 968 REINFQSEGCVTHYGQQLQHFTLPRVWNELKSSCEFLKARGEVDQFNLQNRWKKRGVAMV 1027
Query: 1040 PTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSV 1099
PTKFGISFT K MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAAS+FNIPLSSV
Sbjct: 1028 PTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASSFNIPLSSV 1087
Query: 1100 FVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACY 1159
F+SETSTDKVPN++PTAASASSD+YGAAVLDACEQIKARMEPIASK NF+SFAEL +ACY
Sbjct: 1088 FISETSTDKVPNSTPTAASASSDMYGAAVLDACEQIKARMEPIASKRNFSSFAELVTACY 1147
Query: 1160 VQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILD 1219
++RIDLSAHGFYITP+I FDW TGKG+PF YFTYGA+FAEVEIDTLTGDFHTR+ANV LD
Sbjct: 1148 LERIDLSAHGFYITPDIHFDWKTGKGSPFSYFTYGASFAEVEIDTLTGDFHTRVANVFLD 1207
Query: 1220 LGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLND 1279
LG+S+NPAIDVGQIEGAF+QGLGW+ALEELKWGDAAHKWIPPGCLYTCGPGSYKIPS+ND
Sbjct: 1208 LGHSINPAIDVGQIEGAFVQGLGWVALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSIND 1267
Query: 1280 VPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLD 1339
VPLKF+VSLLKG PN KAIHSSKAVGEPPFFLASSVFFAIKDAI AAR + G+ WFPLD
Sbjct: 1268 VPLKFDVSLLKGAPNPKAIHSSKAVGEPPFFLASSVFFAIKDAIVAARREVGNKDWFPLD 1327
Query: 1340 NPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
NPATPER+RMACLDEF F++S++RPKLSV
Sbjct: 1328 NPATPERVRMACLDEFAMQFVSSDFRPKLSV 1358
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356550325|ref|XP_003543538.1| PREDICTED: xanthine dehydrogenase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2286 bits (5923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1101/1371 (80%), Positives = 1235/1371 (90%), Gaps = 14/1371 (1%)
Query: 1 MGSLKNEEEMEQMGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEG 60
MGSLK EE+++ + EAILYVNG+R++L DGLAH TLLEYLRDIGLTGTKLGCGEG
Sbjct: 1 MGSLKTEEDLKV-----SNEAILYVNGVRRLLSDGLAHFTLLEYLRDIGLTGTKLGCGEG 55
Query: 61 GCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLV 120
GCGACTVMVS+YD+ KKC H A+NACLAPLYS+EGMHVITVEG+G+ K GLHP+QESL
Sbjct: 56 GCGACTVMVSQYDRILKKCSHYAINACLAPLYSVEGMHVITVEGLGSCKRGLHPVQESLA 115
Query: 121 RSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
R+HGSQCGFCTPGF+MSMY+LLRSSQTPP+EEQIEE LAGNLCRCTGYRPI DAFRVFAK
Sbjct: 116 RAHGSQCGFCTPGFVMSMYALLRSSQTPPSEEQIEECLAGNLCRCTGYRPIFDAFRVFAK 175
Query: 181 TNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEID 240
T++ LYT +SS+SL+EG+ VCPSTGKPCSC + N T +K V YEP SY+EID
Sbjct: 176 TSNDLYTGVSSLSLEEGKSVCPSTGKPCSCNLSN-----TNDKCVGGDNGYEPTSYNEID 230
Query: 241 GSTYTEKELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTE 300
G+ YTE+ELIFPPELLLR LNL+GFGGL WYRPL LQH+L+LK+KY D+KLLVGNTE
Sbjct: 231 GTKYTERELIFPPELLLRTPTSLNLTGFGGLMWYRPLTLQHVLDLKAKYTDAKLLVGNTE 290
Query: 301 VGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHE 360
VGIEMRLKRM Y+VLISV HVPELNVL KDDGLEIGAAVRL++L+ F+KVVTER AHE
Sbjct: 291 VGIEMRLKRMPYRVLISVMHVPELNVLGAKDDGLEIGAAVRLSDLMNFFKKVVTERAAHE 350
Query: 361 TSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRT 420
T SCKAFIEQ+KWFAGTQI+N ASVGGNICTASPISDLNPLWMA+ AKF I+D KGNIRT
Sbjct: 351 TLSCKAFIEQLKWFAGTQIRNAASVGGNICTASPISDLNPLWMAARAKFRIIDAKGNIRT 410
Query: 421 TMAEEFFL-GYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYL 479
+AE FFL GYRKV+L SGEILLS+FLPW R FEFVKEFKQ+HRRDDDIA+VNAG+RV+L
Sbjct: 411 VLAENFFLPGYRKVNLASGEILLSVFLPWNRTFEFVKEFKQSHRRDDDIAIVNAGIRVHL 470
Query: 480 EEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDA 539
+E E VV+DA + YGGVAP SL+A KTK F++GK+W+Q+LLQNALK+LQ DI+LKEDA
Sbjct: 471 QEHSENCVVADASIFYGGVAPYSLAATKTKEFLIGKNWNQDLLQNALKVLQKDILLKEDA 530
Query: 540 PGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYE 599
PGGMV+FRKSLTLSFFFKFFLWVSHQM+ S+KES+PS+HLSA+ S HRP + G+QDYE
Sbjct: 531 PGGMVEFRKSLTLSFFFKFFLWVSHQMD---SVKESIPSSHLSAVHSVHRPPVTGSQDYE 587
Query: 600 ITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGA 659
I K GTSVGSPEVHLS+RLQVTGEAEY DDTPMPPN LHAALVLS++PHARI+ IDDS A
Sbjct: 588 IRKRGTSVGSPEVHLSARLQVTGEAEYADDTPMPPNGLHAALVLSKKPHARIIKIDDSEA 647
Query: 660 RSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRK 719
SSPGFV +F A+DV DN+IGPVVADE+LFA + VTCVGQVIGVVVA+THE AK+A+RK
Sbjct: 648 ISSPGFVSLFLAKDVPSDNKIGPVVADEDLFAVDYVTCVGQVIGVVVADTHENAKIAARK 707
Query: 720 VQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEH 779
V VEYEELPAILSI++AI+A+SFHPNTE+C KGDVD CFQSGQCD+IIEGEV++GGQEH
Sbjct: 708 VIVEYEELPAILSIRDAINARSFHPNTEKCLSKGDVDHCFQSGQCDRIIEGEVQMGGQEH 767
Query: 780 FYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGK 839
FYLEPHS+++WT+D GNEVHMISS+QAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGK
Sbjct: 768 FYLEPHSTLIWTVDGGNEVHMISSSQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGK 827
Query: 840 ETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDL 899
ETRSAFIAAAA+VPS+LLNRPV +TLDRD+DMMI+GQRHSFLGKYKVGFTNEG+VLALDL
Sbjct: 828 ETRSAFIAAAASVPSYLLNRPVKITLDRDVDMMITGQRHSFLGKYKVGFTNEGRVLALDL 887
Query: 900 EIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGML 959
EIYNNAGNSLDLSLA+LERAMFHSDNVYEIPN+R+MG CFTNFPS+TAFRGFGGPQG+L
Sbjct: 888 EIYNNAGNSLDLSLAILERAMFHSDNVYEIPNMRVMGRACFTNFPSHTAFRGFGGPQGLL 947
Query: 960 ITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNAR 1019
I ENWIQR+AVE++ SPE+IREINFQGEGSILHYGQ +Q+ TL PLWNELKLSCDF AR
Sbjct: 948 IAENWIQRIAVELKMSPEKIREINFQGEGSILHYGQIVQYSTLAPLWNELKLSCDFAKAR 1007
Query: 1020 KEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQG 1079
KEVD FN +NRW+KRGIAM+P KFGISFT KLMNQAGALV VYTDGTVLVTHGGVEMGQG
Sbjct: 1008 KEVDEFNSHNRWRKRGIAMIPNKFGISFTTKLMNQAGALVQVYTDGTVLVTHGGVEMGQG 1067
Query: 1080 LHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARM 1139
LHTKVAQ+AASAF+IPLSSVF+S+TSTDKVPNASPTAASASSD+YGAAVLDACEQI RM
Sbjct: 1068 LHTKVAQIAASAFHIPLSSVFISDTSTDKVPNASPTAASASSDMYGAAVLDACEQIMERM 1127
Query: 1140 EPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAE 1199
EPIASKHNFNSFAEL ACY +RIDLSAHGFYITP+I FDW GKG PFRYFTYGAAFAE
Sbjct: 1128 EPIASKHNFNSFAELVGACYAERIDLSAHGFYITPDIGFDWTIGKGKPFRYFTYGAAFAE 1187
Query: 1200 VEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWI 1259
VEIDTLTGDFHTR+AN+ LDLGYSLNPAIDVGQIEGAFIQGLGW+ALEELKWGD AHKWI
Sbjct: 1188 VEIDTLTGDFHTRVANIFLDLGYSLNPAIDVGQIEGAFIQGLGWVALEELKWGDEAHKWI 1247
Query: 1260 PPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAI 1319
P GCLYTCGPG+YKIPS+NDVP KFNVSLLKGHPNVKAIHSSKAVGEPPFFLAS+V FAI
Sbjct: 1248 PSGCLYTCGPGAYKIPSVNDVPFKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASAVLFAI 1307
Query: 1320 KDAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
KDAI AAR++ GH WFPLD+PATPERIRMACLDE + F+NS++ PKLSV
Sbjct: 1308 KDAIIAARSEMGHNEWFPLDSPATPERIRMACLDELLSSFVNSDFHPKLSV 1358
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357454311|ref|XP_003597436.1| Xanthine dehydrogenase/oxidase [Medicago truncatula] gi|355486484|gb|AES67687.1| Xanthine dehydrogenase/oxidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 2275 bits (5895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1104/1370 (80%), Positives = 1228/1370 (89%), Gaps = 12/1370 (0%)
Query: 1 MGSLKNEEEMEQMGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEG 60
MGSLK + +E+ + ILYVNG+R+VLP LAH TLLEYLR GLTGTKLGCGEG
Sbjct: 1 MGSLKKMDSVER--DLKNDSPILYVNGIRRVLPHDLAHFTLLEYLR--GLTGTKLGCGEG 56
Query: 61 GCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLV 120
GCGACTVMVS YD +K +H A+NACLAPLYS+EGMHVITVEG+G+ + GLHPIQESL
Sbjct: 57 GCGACTVMVSHYDTNLRKTLHYAINACLAPLYSVEGMHVITVEGLGSCRLGLHPIQESLA 116
Query: 121 RSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
R+HGSQCGFCTPGF+MSMY+LLRSSQTPP+EEQIE LAGNLCRCTGYR I+DAFRVFAK
Sbjct: 117 RTHGSQCGFCTPGFVMSMYALLRSSQTPPSEEQIEACLAGNLCRCTGYRAILDAFRVFAK 176
Query: 181 TNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEID 240
TN+ LYT +SS L+EG+ VCPSTGKPCSC + +V+ D C +SV ++P SY+E+D
Sbjct: 177 TNNMLYTGVSSTGLQEGQSVCPSTGKPCSCNLDSVN--DKCVESV---DRHKPTSYNEVD 231
Query: 241 GSTYTEKELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTE 300
G+ YTEKELIFPPELLLRK LNL+GFGGL WYRPL LQH+L+LK+KYPD+KLLVGNTE
Sbjct: 232 GTKYTEKELIFPPELLLRKPTFLNLTGFGGLMWYRPLTLQHVLDLKAKYPDAKLLVGNTE 291
Query: 301 VGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHE 360
VGIEMRLKRMQYQVL+SV HVPELN+L V DDG+EIGAA+RL+ LL FRKVVTER AHE
Sbjct: 292 VGIEMRLKRMQYQVLVSVMHVPELNILEVTDDGIEIGAAMRLSILLNFFRKVVTERAAHE 351
Query: 361 TSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRT 420
TSSCKAFIEQ+KWFAG+QI+NV+S+GGNICTASPISDLNPLWMA+ AKF I+D KGNI+T
Sbjct: 352 TSSCKAFIEQLKWFAGSQIRNVSSIGGNICTASPISDLNPLWMATRAKFRIIDSKGNIKT 411
Query: 421 TMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLE 480
AE FFLGYRKVDL S EILLS+FLPW R FEFVKEFKQ+HRRDDDIA+VNAG+RV+L+
Sbjct: 412 VPAENFFLGYRKVDLASDEILLSVFLPWNRTFEFVKEFKQSHRRDDDIAIVNAGIRVHLK 471
Query: 481 EKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAP 540
E E WVV+DA +VYGGVAP SLSA KTK F++GK W Q++LQNALKILQ DI+LKEDAP
Sbjct: 472 EHSENWVVADASIVYGGVAPCSLSAIKTKEFLIGKIWDQDMLQNALKILQKDIVLKEDAP 531
Query: 541 GGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEI 600
GGMV+FRKSLTLSFFFKFFLWVSHQM+G IKES+P++HLSA+ S HRP G+QDYEI
Sbjct: 532 GGMVEFRKSLTLSFFFKFFLWVSHQMDG---IKESIPTSHLSAVHSVHRPPATGSQDYEI 588
Query: 601 TKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGAR 660
KHGTSVG PEVH SSRLQVTGEA Y DDTPMPPN LHAALVLSR+PHARILSIDDS AR
Sbjct: 589 MKHGTSVGFPEVHQSSRLQVTGEALYADDTPMPPNGLHAALVLSRKPHARILSIDDSVAR 648
Query: 661 SSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKV 720
SSPGFVG+F A+D+ GDN IG VVADEELFA E +TCVGQVIGV VA+THE AK A+RKV
Sbjct: 649 SSPGFVGLFLAKDIPGDNMIGAVVADEELFAVEYITCVGQVIGVAVADTHENAKTAARKV 708
Query: 721 QVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHF 780
VEYEELPAILSIQ+AI+A+SFHPNTE+ RKGDVD CFQSG+CD+IIEGEV++GGQEHF
Sbjct: 709 HVEYEELPAILSIQDAINARSFHPNTEKHMRKGDVDHCFQSGKCDRIIEGEVQIGGQEHF 768
Query: 781 YLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 840
YLEPH S+VWT+D GNEVHMISSTQAPQKHQKY+SHVLGLPMSKVVCKTKRIGGGFGGKE
Sbjct: 769 YLEPHGSLVWTVDGGNEVHMISSTQAPQKHQKYISHVLGLPMSKVVCKTKRIGGGFGGKE 828
Query: 841 TRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLE 900
TRSAFIAAA +VPS+LLNRPV + LDRD+DMMI+GQRHSFLGKYKVGFTNEGKVLALDLE
Sbjct: 829 TRSAFIAAAVSVPSYLLNRPVKIILDRDVDMMITGQRHSFLGKYKVGFTNEGKVLALDLE 888
Query: 901 IYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLI 960
IYNNAGNSLDLSLA+LERAMFHSDNVYEIPNVRI G VCFTNFPSNTAFRGFGGPQGMLI
Sbjct: 889 IYNNAGNSLDLSLAILERAMFHSDNVYEIPNVRITGRVCFTNFPSNTAFRGFGGPQGMLI 948
Query: 961 TENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARK 1020
TENWIQR+AVE+ SPE I+EINFQGEGSILHYGQ L+HC L LWNELKLSCDF+ R+
Sbjct: 949 TENWIQRIAVELDMSPEVIKEINFQGEGSILHYGQILEHCPLSQLWNELKLSCDFVKTRE 1008
Query: 1021 EVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1080
EVD FN +NRW+KRGIAM+PTKFGISFT K MNQAGALV+VYTDGTVLVTHGGVEMGQGL
Sbjct: 1009 EVDKFNAHNRWRKRGIAMIPTKFGISFTTKFMNQAGALVNVYTDGTVLVTHGGVEMGQGL 1068
Query: 1081 HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARME 1140
HTKVAQ+AASAFNIPLSSVF+SETSTDKVPN+SPTAASASSD+YG AVLDACEQIKARME
Sbjct: 1069 HTKVAQIAASAFNIPLSSVFISETSTDKVPNSSPTAASASSDMYGGAVLDACEQIKARME 1128
Query: 1141 PIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1200
PIAS+HNF SFAEL +ACY++RIDLSAHGFYITP+I+FDWITGKGNPF YFTYGAAFAEV
Sbjct: 1129 PIASRHNFASFAELVNACYMERIDLSAHGFYITPDINFDWITGKGNPFSYFTYGAAFAEV 1188
Query: 1201 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIP 1260
EIDTLTGDFHTR AN+ILDLGYSLNPAIDVGQIEGAFIQGLGW+ALEELKWGD AHKWIP
Sbjct: 1189 EIDTLTGDFHTRAANIILDLGYSLNPAIDVGQIEGAFIQGLGWVALEELKWGDKAHKWIP 1248
Query: 1261 PGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIK 1320
G L TCGPG+YKIPS+NDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLAS+VFFAIK
Sbjct: 1249 SGWLNTCGPGAYKIPSINDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASAVFFAIK 1308
Query: 1321 DAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
DAI AARA+ G T WF LD+PATPERIRMACLDEFT+ F+NS++ PKLSV
Sbjct: 1309 DAIRAARAETGCTDWFTLDSPATPERIRMACLDEFTSSFLNSDFHPKLSV 1358
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442519|ref|XP_004139029.1| PREDICTED: xanthine dehydrogenase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2255 bits (5843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1087/1370 (79%), Positives = 1230/1370 (89%), Gaps = 2/1370 (0%)
Query: 1 MGSLKNEEEMEQMGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEG 60
MGSLK++E+MEQ+GE KEAI+YVNG+R+VLP+GLAHLTLLEYLRD LTGTKLGCGEG
Sbjct: 1 MGSLKSKEDMEQIGED-PKEAIVYVNGVRRVLPNGLAHLTLLEYLRDNRLTGTKLGCGEG 59
Query: 61 GCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLV 120
GCGACTVMVS YD SKKC+H AVNACLAPLYS+EGMHVITVEG+G+ K GLHPIQESL
Sbjct: 60 GCGACTVMVSSYDANSKKCMHYAVNACLAPLYSVEGMHVITVEGLGSHKRGLHPIQESLA 119
Query: 121 RSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
+HGSQCGFCTPGFIMS+Y+LLRSS++PP+EEQIEE LAGNLCRCTGYRPI+DAFRVFAK
Sbjct: 120 SAHGSQCGFCTPGFIMSIYALLRSSKSPPSEEQIEECLAGNLCRCTGYRPIIDAFRVFAK 179
Query: 181 TNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEID 240
T+DALYTN + S + EFVCPSTGKPCSC K+ S C K + CG EP+SYSEID
Sbjct: 180 TDDALYTNSLNTS-ETDEFVCPSTGKPCSCKSKSASERVDCRKGITCGNKREPLSYSEID 238
Query: 241 GSTYTEKELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTE 300
GSTY++KELIFPPEL +K + L LSGF G+KW+RP LQ +LELK++YP++KLLVGNTE
Sbjct: 239 GSTYSDKELIFPPELFRKKLSYLTLSGFNGIKWFRPTTLQEVLELKARYPEAKLLVGNTE 298
Query: 301 VGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHE 360
VGIEMRLK+MQY++L+ V HVPELN++NV DDG+EIGAAVRL+ELL RKV ER A+E
Sbjct: 299 VGIEMRLKKMQYKILVHVMHVPELNMMNVGDDGIEIGAAVRLSELLSNLRKVTAERAAYE 358
Query: 361 TSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRT 420
TS CKAFIEQ+KWFAGTQI+NVASVGGNICTASPISDLNPLWMA+ AKF I++C G IRT
Sbjct: 359 TSFCKAFIEQLKWFAGTQIRNVASVGGNICTASPISDLNPLWMATRAKFRIINCMGKIRT 418
Query: 421 TMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLE 480
T+AE FFLGYRKVDL + E LLS+FLPW+R FE+VKEFKQAHRRDDDIA+VNAGMRV+L+
Sbjct: 419 TLAENFFLGYRKVDLANDEFLLSVFLPWSRRFEYVKEFKQAHRRDDDIAIVNAGMRVFLK 478
Query: 481 EKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAP 540
E+ + VVSDA + YGGVAPLSLSA +TK +++GK W Q LL+NAL++L+ DI+L+E+AP
Sbjct: 479 EEGKNLVVSDASIAYGGVAPLSLSAIRTKEYLIGKIWDQMLLKNALEVLEEDILLQENAP 538
Query: 541 GGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEI 600
GGMV+FRKSLTLSFFFKF+LWVS++ME + I E VP +HLSA++SF RP +IG+QDYEI
Sbjct: 539 GGMVEFRKSLTLSFFFKFYLWVSNEMERHSLIGEKVPLSHLSAVKSFQRPHVIGSQDYEI 598
Query: 601 TKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGAR 660
KHGT+VG PEVHLS+RLQVTGEAEY DD P+PP+ LHAAL+LS++PHARI IDD AR
Sbjct: 599 KKHGTAVGYPEVHLSARLQVTGEAEYADDIPLPPHGLHAALILSKKPHARICCIDDLEAR 658
Query: 661 SSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKV 720
S GF GIF ++DV DN+IG V+ DEELFASE VTCVGQ+IGVVVA+THE AKLA+RKV
Sbjct: 659 KSAGFAGIFLSKDVPADNKIGAVIHDEELFASEFVTCVGQIIGVVVADTHENAKLAARKV 718
Query: 721 QVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHF 780
VEYEELPAILSI++AI A SFHPNTE+C +KGDV+ CFQSGQCDKIIEGEV+VGGQEHF
Sbjct: 719 HVEYEELPAILSIEDAILANSFHPNTEKCLKKGDVEFCFQSGQCDKIIEGEVQVGGQEHF 778
Query: 781 YLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 840
YLEP+SSVVWT+D GNEVH++SSTQAPQKHQKYVS VLGLPMSKVVCKTKRIGGGFGGKE
Sbjct: 779 YLEPNSSVVWTLDSGNEVHLVSSTQAPQKHQKYVSSVLGLPMSKVVCKTKRIGGGFGGKE 838
Query: 841 TRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLE 900
TR+A +AAA+VPSFLLN+PV LTLDRD DMMI+GQRHSFLGKYKVGFTNEGKV+ALDLE
Sbjct: 839 TRAAVYSAAASVPSFLLNQPVKLTLDRDTDMMITGQRHSFLGKYKVGFTNEGKVMALDLE 898
Query: 901 IYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLI 960
IYNN GNSLDLSLA+LERAMFHSDNVYEIPNVRI G VCFTNFPSNTAFRGFGGPQGMLI
Sbjct: 899 IYNNGGNSLDLSLAILERAMFHSDNVYEIPNVRIQGKVCFTNFPSNTAFRGFGGPQGMLI 958
Query: 961 TENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARK 1020
TENWIQR+AVE++KSPEEIREINFQGEG +LHYGQQ+++ TL PLW++LK SCDF NARK
Sbjct: 959 TENWIQRIAVELKKSPEEIREINFQGEGYMLHYGQQVEYSTLAPLWDQLKTSCDFANARK 1018
Query: 1021 EVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1080
EV+ FN NRW+KRG+AMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL
Sbjct: 1019 EVEQFNSQNRWRKRGVAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1078
Query: 1081 HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARME 1140
HTKVAQVAASAFNIPLSSVF+SETSTDKVPNASPTAASASSD+YGAAVLDACEQIKARME
Sbjct: 1079 HTKVAQVAASAFNIPLSSVFISETSTDKVPNASPTAASASSDMYGAAVLDACEQIKARME 1138
Query: 1141 PIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1200
PIAS+HNF+SFAELA ACY QRIDLSAHGF+ITPEI FDW TGKG PFRYFTYGAAF+EV
Sbjct: 1139 PIASQHNFSSFAELALACYAQRIDLSAHGFFITPEIGFDWTTGKGIPFRYFTYGAAFSEV 1198
Query: 1201 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIP 1260
EIDTLTGDFHTR ANV LDLG+SLNPAIDVGQIEGAF+QGLGW+ALEELKWGD AH+WIP
Sbjct: 1199 EIDTLTGDFHTRSANVFLDLGHSLNPAIDVGQIEGAFVQGLGWVALEELKWGDPAHRWIP 1258
Query: 1261 PGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIK 1320
PG LYT GPGSYKIPS+NDVP KFNVSLLKGHPNVKA+HSSKAVGEPPFFLAS+VFFAIK
Sbjct: 1259 PGTLYTAGPGSYKIPSINDVPFKFNVSLLKGHPNVKALHSSKAVGEPPFFLASAVFFAIK 1318
Query: 1321 DAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
DAI AAR ++GH WFPLDNPATPERIRMACLDEFT PF ++RPKLS+
Sbjct: 1319 DAIIAARKESGHDDWFPLDNPATPERIRMACLDEFTTPFAGLDFRPKLSI 1368
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449476051|ref|XP_004154626.1| PREDICTED: LOW QUALITY PROTEIN: xanthine dehydrogenase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2244 bits (5814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1084/1370 (79%), Positives = 1226/1370 (89%), Gaps = 2/1370 (0%)
Query: 1 MGSLKNEEEMEQMGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEG 60
MGSLK++E+MEQ+GE KEAI+YVNG+R+VLP+GLAHLTLLEYLRD LTGTKLGCGEG
Sbjct: 1 MGSLKSKEDMEQIGED-PKEAIVYVNGVRRVLPNGLAHLTLLEYLRDNRLTGTKLGCGEG 59
Query: 61 GCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLV 120
GCGACTVMVS YD SKKC+H AVNACLAPLYS+EGMHVITVEG+G+ K GLHPIQESL
Sbjct: 60 GCGACTVMVSSYDANSKKCMHYAVNACLAPLYSVEGMHVITVEGLGSHKRGLHPIQESLA 119
Query: 121 RSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
+HGSQCGFCTPGFIMS+Y+LLRSS++PP+EEQIEE LAGNLCRCTGYRPI+DAFRVFAK
Sbjct: 120 SAHGSQCGFCTPGFIMSIYALLRSSKSPPSEEQIEECLAGNLCRCTGYRPIIDAFRVFAK 179
Query: 181 TNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEID 240
T+DALYTN + S + EFVCPSTGKPCSC K+ S C K + CG EP+SYSEID
Sbjct: 180 TDDALYTNSLNTS-ETDEFVCPSTGKPCSCKSKSASERVDCRKGITCGNKREPLSYSEID 238
Query: 241 GSTYTEKELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTE 300
GSTY++KELIFPPEL +K + L LSGF G+ RP LQ +LELK++YP++KLLVGNTE
Sbjct: 239 GSTYSDKELIFPPELFRKKLSYLTLSGFNGINXVRPTTLQEVLELKARYPEAKLLVGNTE 298
Query: 301 VGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHE 360
VGIEMRLK+MQY++L+ V HVPELN++NV DDG+EIGAAVRL+ELL RKV ER A+E
Sbjct: 299 VGIEMRLKKMQYKILVHVMHVPELNMMNVGDDGIEIGAAVRLSELLSNLRKVTAERAAYE 358
Query: 361 TSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRT 420
TS CKAFIEQ+KWFAGTQI+NVASVGGNICTASPISDLNPLWMA+ AKF I++C G IRT
Sbjct: 359 TSFCKAFIEQLKWFAGTQIRNVASVGGNICTASPISDLNPLWMATRAKFRIINCMGKIRT 418
Query: 421 TMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLE 480
T+AE FFLGYRKVDL + E LLS+FLPW+R FE+VKEFKQAHRRDDDIA+VNAGMRV+L+
Sbjct: 419 TLAENFFLGYRKVDLANDEFLLSVFLPWSRRFEYVKEFKQAHRRDDDIAIVNAGMRVFLK 478
Query: 481 EKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAP 540
E+ + VVSDA + YGGVAPLSLSA +TK +++GK W Q LL+NAL++L+ DI+L+E+AP
Sbjct: 479 EEGKNLVVSDASIAYGGVAPLSLSAIRTKEYLIGKIWDQMLLKNALEVLEEDILLQENAP 538
Query: 541 GGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEI 600
GGMV+FRKSLTLSFFFKF+LWVS++ME + I E VP +HLSA++SF RP +IG+QDYEI
Sbjct: 539 GGMVEFRKSLTLSFFFKFYLWVSNEMERHSLIGEKVPLSHLSAVKSFQRPHVIGSQDYEI 598
Query: 601 TKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGAR 660
KHGT+VG PEVHLS+RLQVTGEAEY DD P+PP+ LHAAL+LS++PHARI IDD AR
Sbjct: 599 KKHGTAVGYPEVHLSARLQVTGEAEYADDIPLPPHGLHAALILSKKPHARICCIDDLEAR 658
Query: 661 SSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKV 720
S GF GIF ++DV DN+IG V+ DEELFASE VTCVGQ+IGVVVA+THE AKLA+RKV
Sbjct: 659 KSAGFAGIFLSKDVPADNKIGAVIHDEELFASEFVTCVGQIIGVVVADTHENAKLAARKV 718
Query: 721 QVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHF 780
VEYEELPAILSI++AI A SFHPNTE+C +KGDV+ CFQSGQCDKIIEGEV+VGGQEHF
Sbjct: 719 HVEYEELPAILSIEDAILANSFHPNTEKCLKKGDVEFCFQSGQCDKIIEGEVQVGGQEHF 778
Query: 781 YLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 840
YLEP+SSVVWT+D GNEVH++SSTQAPQKHQKYVS VLGLPMSKVVCKTKRIGGGFGGKE
Sbjct: 779 YLEPNSSVVWTLDSGNEVHLVSSTQAPQKHQKYVSSVLGLPMSKVVCKTKRIGGGFGGKE 838
Query: 841 TRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLE 900
TR+A +AAA+VPSFLLN+PV LTLDRD DMMI+GQRHSFLGKYKVGFTNEGKV+ALDLE
Sbjct: 839 TRAAVYSAAASVPSFLLNQPVKLTLDRDTDMMITGQRHSFLGKYKVGFTNEGKVMALDLE 898
Query: 901 IYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLI 960
IYNN GNSLDLSLA+LERAMFHSDNVYEIPNVRI G VCFTNFPSNTAFRGFGGPQGMLI
Sbjct: 899 IYNNGGNSLDLSLAILERAMFHSDNVYEIPNVRIQGKVCFTNFPSNTAFRGFGGPQGMLI 958
Query: 961 TENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARK 1020
TENWIQR+AVE++KSPEEIREINFQGEG +LHYGQQ+++ TL PLW++LK SCDF NARK
Sbjct: 959 TENWIQRIAVELKKSPEEIREINFQGEGYMLHYGQQVEYSTLAPLWDQLKTSCDFANARK 1018
Query: 1021 EVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1080
EV+ FN NRW+KRG+AMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL
Sbjct: 1019 EVEQFNSQNRWRKRGVAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1078
Query: 1081 HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARME 1140
HTKVAQVAASAFNIPLSSVF+SETSTDKVPNASPTAASASSD+YGAAVLDACEQIKARME
Sbjct: 1079 HTKVAQVAASAFNIPLSSVFISETSTDKVPNASPTAASASSDMYGAAVLDACEQIKARME 1138
Query: 1141 PIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1200
PIAS+HNF+SFAELA ACY QRIDLSAHGF+ITPEI FDW TGKG PFRYFTYGAAF+EV
Sbjct: 1139 PIASQHNFSSFAELALACYAQRIDLSAHGFFITPEIGFDWTTGKGIPFRYFTYGAAFSEV 1198
Query: 1201 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIP 1260
EIDTLTGDFHTR ANV LDLG+SLNPAIDVGQIEGAF+QGLGW+ALEELKWGD AH+WIP
Sbjct: 1199 EIDTLTGDFHTRSANVFLDLGHSLNPAIDVGQIEGAFVQGLGWVALEELKWGDPAHRWIP 1258
Query: 1261 PGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIK 1320
PG LYT GPGSYKIPS+NDVP KFNVSLLKGHPNVKA+HSSKAVGEPPFFLAS+VFFAIK
Sbjct: 1259 PGTLYTAGPGSYKIPSINDVPFKFNVSLLKGHPNVKALHSSKAVGEPPFFLASAVFFAIK 1318
Query: 1321 DAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
DAI AAR ++G WFPLDNPATPERIRMACLDEFT PF ++RPKLS+
Sbjct: 1319 DAIIAARKESGQDDWFPLDNPATPERIRMACLDEFTTPFAGLDFRPKLSI 1368
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30690157|ref|NP_195215.2| xanthine dehydrogenase 1 [Arabidopsis thaliana] gi|75150672|sp|Q8GUQ8.1|XDH1_ARATH RecName: Full=Xanthine dehydrogenase 1; Short=AtXDH1 gi|27413633|gb|AAO11781.1| xanthine dehydrogenase 1 [Arabidopsis thaliana] gi|332661034|gb|AEE86434.1| xanthine dehydrogenase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 2230 bits (5779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1064/1370 (77%), Positives = 1224/1370 (89%), Gaps = 9/1370 (0%)
Query: 1 MGSLKNEEEMEQMGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEG 60
MGSLK + E+ G+ +T EA+LYVNG+R+VLPDGLAH+TLLEYLRD+GLTGTKLGCGEG
Sbjct: 1 MGSLKKDGEI---GDEFT-EALLYVNGVRRVLPDGLAHMTLLEYLRDLGLTGTKLGCGEG 56
Query: 61 GCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLV 120
GCGACTVMVS YD+KSK VH AVNACLAPLYS+EGMHVI++EG+G+RK GLHP+QESL
Sbjct: 57 GCGACTVMVSSYDRKSKTSVHYAVNACLAPLYSVEGMHVISIEGLGHRKLGLHPVQESLA 116
Query: 121 RSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
SHGSQCGFCTPGFIMSMYSLLRSS+ P+EE+IEE LAGNLCRCTGYRPIVDAFRVFAK
Sbjct: 117 SSHGSQCGFCTPGFIMSMYSLLRSSKNSPSEEEIEECLAGNLCRCTGYRPIVDAFRVFAK 176
Query: 181 TNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEID 240
++DALY +SS+SL++G +CPSTGKPCSCG K + +C + ++ +SYS+ID
Sbjct: 177 SDDALYCGVSSLSLQDGSTICPSTGKPCSCGSKTTNEVASCNED-----RFQSISYSDID 231
Query: 241 GSTYTEKELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTE 300
G+ YT+KELIFPPELLLRK PL L G GG+ WYRP+ LQ+LLELK+ YPD+KLLVGNTE
Sbjct: 232 GAKYTDKELIFPPELLLRKLTPLKLRGNGGITWYRPVCLQNLLELKANYPDAKLLVGNTE 291
Query: 301 VGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHE 360
VGIEMRLKR+QYQVLISV VPELN LNV D+G+E+G+A+RL+ELL++FRK+V ERPAHE
Sbjct: 292 VGIEMRLKRLQYQVLISVAQVPELNALNVNDNGIEVGSALRLSELLRLFRKIVKERPAHE 351
Query: 361 TSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRT 420
TS+CKAFIEQ+KWFAGTQI+NVA +GGNICTASPISDLNPLWMAS A+F I +C G++R+
Sbjct: 352 TSACKAFIEQLKWFAGTQIRNVACIGGNICTASPISDLNPLWMASRAEFRITNCNGDVRS 411
Query: 421 TMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLE 480
A++FFLGYRKVD+ S EILLS+FLPWTRP E+VKEFKQAHRRDDDIA+VN GMRV+LE
Sbjct: 412 IPAKDFFLGYRKVDMGSNEILLSVFLPWTRPLEYVKEFKQAHRRDDDIAIVNGGMRVFLE 471
Query: 481 EKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAP 540
+K ++ VSDA + YGGVAPLSL A+KT+ F++GK+W+++LLQ+ALK++Q+D+++KEDAP
Sbjct: 472 DKGQQLFVSDASIAYGGVAPLSLCARKTEEFLIGKNWNKDLLQDALKVIQSDVVIKEDAP 531
Query: 541 GGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEI 600
GGMV+FRKSLTLSFFFKFFLWVSH + NS E+ P +H+SA+Q R S IG QDYE
Sbjct: 532 GGMVEFRKSLTLSFFFKFFLWVSHNVNNANSAIETFPPSHMSAVQPVPRLSRIGKQDYET 591
Query: 601 TKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGAR 660
K GTSVGS EVHLS+R+QVTGEAEYTDDTP+PPN LHAA VLS+ PHARILSIDDS A+
Sbjct: 592 VKQGTSVGSSEVHLSARMQVTGEAEYTDDTPVPPNTLHAAFVLSKVPHARILSIDDSAAK 651
Query: 661 SSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKV 720
SS GFVG+F A+D+ GDN IGP+V DEELFA++VVTCVGQVIGVVVA+THE AK A+ KV
Sbjct: 652 SSSGFVGLFLAKDIPGDNMIGPIVPDEELFATDVVTCVGQVIGVVVADTHENAKTAAGKV 711
Query: 721 QVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHF 780
V YEELPAILSI+EAI+AKSFHPNTE+ RKGDV++CFQSGQCD++IEGEV++GGQEHF
Sbjct: 712 DVRYEELPAILSIKEAINAKSFHPNTEKRLRKGDVELCFQSGQCDRVIEGEVQMGGQEHF 771
Query: 781 YLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 840
YLEP+ S+VWT+D G+EVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE
Sbjct: 772 YLEPNGSLVWTVDGGSEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 831
Query: 841 TRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLE 900
TRSAFIAAAA+VPS+LLNRPV L LDRD+DMMI+G RHSFLGKYKVGFTNEGK+LALDLE
Sbjct: 832 TRSAFIAAAASVPSYLLNRPVKLILDRDVDMMITGHRHSFLGKYKVGFTNEGKILALDLE 891
Query: 901 IYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLI 960
IYNN GNSLDLSL+VLERAMFHSDNVYEIP+VRI+GNVCFTNFPSNTAFRGFGGPQGMLI
Sbjct: 892 IYNNGGNSLDLSLSVLERAMFHSDNVYEIPHVRIVGNVCFTNFPSNTAFRGFGGPQGMLI 951
Query: 961 TENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARK 1020
TENWIQR+A E+ KSPEEI+E+NFQ EGS+ HY Q LQHCTL LW ELK+SC+FL AR+
Sbjct: 952 TENWIQRIAAELNKSPEEIKEMNFQVEGSVTHYCQTLQHCTLHQLWKELKVSCNFLKARR 1011
Query: 1021 EVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1080
E D FN +NRWKKRG+AMVPTKFGISFT K MNQAGALVHVYTDGTVLVTHGGVEMGQGL
Sbjct: 1012 EADEFNSHNRWKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1071
Query: 1081 HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARME 1140
HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSD+YGAAVLDACEQI ARME
Sbjct: 1072 HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDMYGAAVLDACEQIIARME 1131
Query: 1141 PIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1200
P+ASKHNFN+F EL SACY QRIDLSAHGF+I P++ FDWI+GKGN FRY+TYGAAFAEV
Sbjct: 1132 PVASKHNFNTFTELVSACYFQRIDLSAHGFHIVPDLGFDWISGKGNAFRYYTYGAAFAEV 1191
Query: 1201 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIP 1260
EIDTLTGDFHTR A+++LDLGYSLNPAIDVGQIEGAF+QGLGW+ALEELKWGDAAHKWI
Sbjct: 1192 EIDTLTGDFHTRAADIMLDLGYSLNPAIDVGQIEGAFVQGLGWVALEELKWGDAAHKWIK 1251
Query: 1261 PGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIK 1320
PG L TCGPG+YKIPS+ND+P NVSLLKG+PN KAIHSSKAVGEPPFFLASSVFFAIK
Sbjct: 1252 PGSLLTCGPGNYKIPSINDMPFNLNVSLLKGNPNTKAIHSSKAVGEPPFFLASSVFFAIK 1311
Query: 1321 DAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
+AI AAR + G T WFPL++PATPERIRMAC DEF+APF+NS++ P LSV
Sbjct: 1312 EAIKAARTEVGLTDWFPLESPATPERIRMACFDEFSAPFVNSDFYPNLSV 1361
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1370 | ||||||
| TAIR|locus:2116900 | 1361 | XDH1 "xanthine dehydrogenase 1 | 0.993 | 1.0 | 0.732 | 0.0 | |
| TAIR|locus:2116910 | 1353 | XDH2 "xanthine dehydrogenase 2 | 0.982 | 0.994 | 0.727 | 0.0 | |
| UNIPROTKB|P47990 | 1358 | XDH "Xanthine dehydrogenase/ox | 0.960 | 0.969 | 0.458 | 1.5e-310 | |
| UNIPROTKB|F1NIY2 | 1341 | XDH "Xanthine dehydrogenase/ox | 0.945 | 0.966 | 0.460 | 8.8e-308 | |
| UNIPROTKB|F1P4T0 | 1340 | XDH "Xanthine dehydrogenase/ox | 0.937 | 0.958 | 0.458 | 1.4e-307 | |
| UNIPROTKB|F1P4S9 | 1334 | XDH "Xanthine dehydrogenase/ox | 0.800 | 0.822 | 0.471 | 1.9e-307 | |
| DICTYBASE|DDB_G0291047 | 1358 | xdh "xanthine dehydrogenase" [ | 0.951 | 0.959 | 0.448 | 3.1e-305 | |
| ZFIN|ZDB-GENE-070719-9 | 1351 | xdh "xanthine dehydrogenase" [ | 0.956 | 0.970 | 0.444 | 1.2e-301 | |
| UNIPROTKB|J9JHQ2 | 1333 | XDH "Uncharacterized protein" | 0.831 | 0.854 | 0.454 | 3e-300 | |
| UNIPROTKB|P47989 | 1333 | XDH "Xanthine dehydrogenase/ox | 0.805 | 0.828 | 0.462 | 4.9e-300 |
| TAIR|locus:2116900 XDH1 "xanthine dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 5400 (1906.0 bits), Expect = 0., P = 0.
Identities = 1004/1370 (73%), Positives = 1163/1370 (84%)
Query: 1 MGSLKNEEEMEQMGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIXXXXXXXXXXXX 60
MGSLK + E+ G+ +T EA+LYVNG+R+VLPDGLAH+TLLEYLRD+
Sbjct: 1 MGSLKKDGEI---GDEFT-EALLYVNGVRRVLPDGLAHMTLLEYLRDLGLTGTKLGCGEG 56
Query: 61 XXXXXXVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLV 120
VMVS YD+KSK VH AVNACLAPLYS+EGMHVI++EG+G+RK GLHP+QESL
Sbjct: 57 GCGACTVMVSSYDRKSKTSVHYAVNACLAPLYSVEGMHVISIEGLGHRKLGLHPVQESLA 116
Query: 121 RSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
SHGSQCGFCTPGFIMSMYSLLRSS+ P+EE+IEE LAGNLCRCTGYRPIVDAFRVFAK
Sbjct: 117 SSHGSQCGFCTPGFIMSMYSLLRSSKNSPSEEEIEECLAGNLCRCTGYRPIVDAFRVFAK 176
Query: 181 TNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEID 240
++DALY +SS+SL++G +CPSTGKPCSCG K + +C + ++ +SYS+ID
Sbjct: 177 SDDALYCGVSSLSLQDGSTICPSTGKPCSCGSKTTNEVASCNED-----RFQSISYSDID 231
Query: 241 GSTYTEKELIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTE 300
G+ YT+KELIFPPELLLRK PL L G GG+ WYRP+ LQ+LLELK+ YPD+KLLVGNTE
Sbjct: 232 GAKYTDKELIFPPELLLRKLTPLKLRGNGGITWYRPVCLQNLLELKANYPDAKLLVGNTE 291
Query: 301 VGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHE 360
VGIEMRLKR+QYQVLISV VPELN LNV D+G+E+G+A+RL+ELL++FRK+V ERPAHE
Sbjct: 292 VGIEMRLKRLQYQVLISVAQVPELNALNVNDNGIEVGSALRLSELLRLFRKIVKERPAHE 351
Query: 361 TSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRT 420
TS+CKAFIEQ+KWFAGTQI+NVA +GGNICTASPISDLNPLWMAS A+F I +C G++R+
Sbjct: 352 TSACKAFIEQLKWFAGTQIRNVACIGGNICTASPISDLNPLWMASRAEFRITNCNGDVRS 411
Query: 421 TMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLE 480
A++FFLGYRKVD+ S EILLS+FLPWTRP E+VKEFKQAHRRDDDIA+VN GMRV+LE
Sbjct: 412 IPAKDFFLGYRKVDMGSNEILLSVFLPWTRPLEYVKEFKQAHRRDDDIAIVNGGMRVFLE 471
Query: 481 EKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAP 540
+K ++ VSDA + YGGVAPLSL A+KT+ F++GK+W+++LLQ+ALK++Q+D+++KEDAP
Sbjct: 472 DKGQQLFVSDASIAYGGVAPLSLCARKTEEFLIGKNWNKDLLQDALKVIQSDVVIKEDAP 531
Query: 541 GGMVDXXXXXXXXXXXXXXXWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEI 600
GGMV+ WVSH + NS E+ P +H+SA+Q R S IG QDYE
Sbjct: 532 GGMVEFRKSLTLSFFFKFFLWVSHNVNNANSAIETFPPSHMSAVQPVPRLSRIGKQDYET 591
Query: 601 TKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGAR 660
K GTSVGS EVHLS+R+QVTGEAEYTDDTP+PPN LHAA VLS+ PHARILSIDDS A+
Sbjct: 592 VKQGTSVGSSEVHLSARMQVTGEAEYTDDTPVPPNTLHAAFVLSKVPHARILSIDDSAAK 651
Query: 661 SSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKLASRKV 720
SS GFVG+F A+D+ GDN IGP+V DEELFA++ A+THE AK A+ KV
Sbjct: 652 SSSGFVGLFLAKDIPGDNMIGPIVPDEELFATDVVTCVGQVIGVVVADTHENAKTAAGKV 711
Query: 721 QVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHF 780
V YEELPAILSI+EAI+AKSFHPNTE+ RKGDV++CFQSGQCD++IEGEV++GGQEHF
Sbjct: 712 DVRYEELPAILSIKEAINAKSFHPNTEKRLRKGDVELCFQSGQCDRVIEGEVQMGGQEHF 771
Query: 781 YLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 840
YLEP+ S+VWT+D G+EVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE
Sbjct: 772 YLEPNGSLVWTVDGGSEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKE 831
Query: 841 TRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLE 900
TRSAFI VPS+LLNRPV L LDRD+DMMI+G RHSFLGKYKVGFTNEGK+LALDLE
Sbjct: 832 TRSAFIAAAASVPSYLLNRPVKLILDRDVDMMITGHRHSFLGKYKVGFTNEGKILALDLE 891
Query: 901 IYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLI 960
IYNN GNSLDLSL+VLERAMFHSDNVYEIP+VRI+GNVCFTNFPSNTAFRGFGGPQGMLI
Sbjct: 892 IYNNGGNSLDLSLSVLERAMFHSDNVYEIPHVRIVGNVCFTNFPSNTAFRGFGGPQGMLI 951
Query: 961 TENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARK 1020
TENWIQR+A E+ KSPEEI+E+NFQ EGS+ HY Q LQHCTL LW ELK+SC+FL AR+
Sbjct: 952 TENWIQRIAAELNKSPEEIKEMNFQVEGSVTHYCQTLQHCTLHQLWKELKVSCNFLKARR 1011
Query: 1021 EVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1080
E D FN +NRWKKRG+AMVPTKFGISFT K MNQAGALVHVYTDGTVLVTHGGVEMGQGL
Sbjct: 1012 EADEFNSHNRWKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1071
Query: 1081 HTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYGAAVLDACEQIKARME 1140
HTKVAQVAASAFNIPLSSVFVSETSTDKVPN D+YGAAVLDACEQI ARME
Sbjct: 1072 HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDMYGAAVLDACEQIIARME 1131
Query: 1141 PIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1200
P+ASKHNFN+F EL SACY QRIDLSAHGF+I P++ FDWI+GKGN FRY+TYGAAFAEV
Sbjct: 1132 PVASKHNFNTFTELVSACYFQRIDLSAHGFHIVPDLGFDWISGKGNAFRYYTYGAAFAEV 1191
Query: 1201 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIP 1260
EIDTLTGDFHTR A+++LDLGYSLNPAIDVGQIEGAF+QGLGW+ALEELKWGDAAHKWI
Sbjct: 1192 EIDTLTGDFHTRAADIMLDLGYSLNPAIDVGQIEGAFVQGLGWVALEELKWGDAAHKWIK 1251
Query: 1261 PGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIK 1320
PG L TCGPG+YKIPS+ND+P NVSLLKG+PN KAIHSSKAVGEPPFFLASSVFFAIK
Sbjct: 1252 PGSLLTCGPGNYKIPSINDMPFNLNVSLLKGNPNTKAIHSSKAVGEPPFFLASSVFFAIK 1311
Query: 1321 DAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
+AI AAR + G T WFPL++PATPERIRMAC DEF+APF+NS++ P LSV
Sbjct: 1312 EAIKAARTEVGLTDWFPLESPATPERIRMACFDEFSAPFVNSDFYPNLSV 1361
|
|
| TAIR|locus:2116910 XDH2 "xanthine dehydrogenase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 5311 (1874.6 bits), Expect = 0., P = 0.
Identities = 983/1351 (72%), Positives = 1147/1351 (84%)
Query: 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIXXXXXXXXXXXXXXXXXXVMVSRYDKKSKKC 79
EAI+YVNG+R+VLPDGLAH+TLLEYLRD+ VMVS YD++SK C
Sbjct: 8 EAIMYVNGVRRVLPDGLAHMTLLEYLRDLGLTGTKLGCGEGGCGSCTVMVSSYDRESKTC 67
Query: 80 VHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMY 139
VH AVNACLAPLYS+EGMHVI++EGVG+RK GLHP+QESL SHGSQCGFCTPGF+MSMY
Sbjct: 68 VHYAVNACLAPLYSVEGMHVISIEGVGHRKLGLHPLQESLASSHGSQCGFCTPGFVMSMY 127
Query: 140 SLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEF 199
+LLRSS+ P+EE+IEE LAGNLCRCTGYRPI+DAFRVFAK++DALY+ +SS+SL++G
Sbjct: 128 ALLRSSKNSPSEEEIEECLAGNLCRCTGYRPIIDAFRVFAKSDDALYSGLSSLSLQDGSN 187
Query: 200 VCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLRK 259
+CPSTGKPCSCG K S A TC + ++ +SYS+IDG+ YT+KELIFPPELLLRK
Sbjct: 188 ICPSTGKPCSCGSKTTSEAATCNED-----RFQSISYSDIDGAKYTDKELIFPPELLLRK 242
Query: 260 SNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVT 319
PL L G G+ WYRP+ LQ+LLELK+ +PD+KLLVGNTEVGIEMRLKR+QY VLIS
Sbjct: 243 LAPLKLGGNEGITWYRPVSLQNLLELKANFPDAKLLVGNTEVGIEMRLKRLQYPVLISAA 302
Query: 320 HVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQI 379
VPELN LNV D+G+E+G+A+RL+ELL++FRKVV ERPAHETS+CKAFIEQ+KWFAGTQI
Sbjct: 303 QVPELNALNVNDNGIEVGSALRLSELLRLFRKVVKERPAHETSACKAFIEQLKWFAGTQI 362
Query: 380 KNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGE 439
+NVA +GGNICTASPISDLNPLWMAS A+F I++C G++R+ A++FFLGYRKVD+ S E
Sbjct: 363 RNVACIGGNICTASPISDLNPLWMASRAEFRIINCNGDVRSIPAKDFFLGYRKVDMGSNE 422
Query: 440 ILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVA 499
ILLS+FLPWTRP E+VKEFKQAHRRDDDIA+VN GMRV+LEEK ++ VSDA +VYGGVA
Sbjct: 423 ILLSVFLPWTRPLEYVKEFKQAHRRDDDIAIVNGGMRVFLEEKGQQLFVSDASIVYGGVA 482
Query: 500 PLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDXXXXXXXXXXXXXX 559
PLSL A+ T+ ++GK+W++ LLQ+ALK++Q+D+++KE APGGMV+
Sbjct: 483 PLSLRARNTEELLIGKNWNKCLLQDALKVIQSDVLIKEGAPGGMVEFRKSLTLSFFFKFF 542
Query: 560 XWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQ 619
WV+H + N E+ P +H+SA+Q R S IG QDYE K GTSVG PEVHLS+R+Q
Sbjct: 543 LWVTHHVNNVNPTIETFPPSHMSAVQLVPRFSRIGKQDYETVKQGTSVGLPEVHLSARMQ 602
Query: 620 VTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR 679
VTGEAEYTDDTP+PP LHAALVLS+ PHARILS+DDS A+SS GFVG+F A+DV G+N
Sbjct: 603 VTGEAEYTDDTPLPPCTLHAALVLSKVPHARILSVDDSAAKSSSGFVGLFLAKDVPGNNM 662
Query: 680 IGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKLASRKVQVEYEELPAILSIQEAIDA 739
IGP+VADEELFA++ A+THE AK A+RKV V Y+ELPAILSI+EAI+A
Sbjct: 663 IGPIVADEELFATDVVTCVGQVIGVLVADTHENAKTAARKVDVRYQELPAILSIKEAINA 722
Query: 740 KSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVH 799
KSFHPNTER RKGDV++CFQSGQCD+IIEGEV++GGQEHFYLEP+ S+VWT+D GNEVH
Sbjct: 723 KSFHPNTERRLRKGDVELCFQSGQCDRIIEGEVQMGGQEHFYLEPNGSLVWTIDGGNEVH 782
Query: 800 MISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIXXXXXVPSFLLNR 859
MISSTQAPQ+HQKYVSHVLGLPMSKVVCKTKR+GGGFGGKETRSAFI VPS+LLNR
Sbjct: 783 MISSTQAPQQHQKYVSHVLGLPMSKVVCKTKRLGGGFGGKETRSAFIAAAASVPSYLLNR 842
Query: 860 PVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERA 919
PV L LDRD+DMMI+G RHSF+GKYKVGFTNEGK+LALDLEIYNN GNS+DLSL+ LERA
Sbjct: 843 PVKLILDRDVDMMITGHRHSFVGKYKVGFTNEGKILALDLEIYNNGGNSMDLSLSNLERA 902
Query: 920 MFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEI 979
MFHSDNVYEIP+VRI+GNVCFTNFPSNTAFRGFGGPQGMLITENWIQR+A E+ K PEEI
Sbjct: 903 MFHSDNVYEIPHVRIVGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRIAAELDKIPEEI 962
Query: 980 REINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMV 1039
+E+NFQ EGSI HY Q LQHCTL LW ELK+S +FL R+E D FN +NRWKKRG+AMV
Sbjct: 963 KEMNFQVEGSITHYFQSLQHCTLHQLWKELKVSSNFLKTRREADEFNSHNRWKKRGVAMV 1022
Query: 1040 PTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSV 1099
PTKFGISFT K MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAA+AFNI LSSV
Sbjct: 1023 PTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAATAFNILLSSV 1082
Query: 1100 FVSETSTDKVPNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACY 1159
FVSETSTDKVPN D+YGAAVLDACEQI ARMEP+ASKHNFN+F+ELASACY
Sbjct: 1083 FVSETSTDKVPNASPTAASASSDMYGAAVLDACEQIIARMEPVASKHNFNTFSELASACY 1142
Query: 1160 VQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILD 1219
QRIDLSAHGF+I PE++FDW++GKGN +RY+TYGAAFAEVEIDTLTGDFHTR A+++LD
Sbjct: 1143 FQRIDLSAHGFHIVPELEFDWVSGKGNAYRYYTYGAAFAEVEIDTLTGDFHTRKADIMLD 1202
Query: 1220 LGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLND 1279
LGYSLNP ID+GQIEGAF+QGLGW+ALEELKWGDAAHKWI PG L TCGPGSYKIPS+ND
Sbjct: 1203 LGYSLNPTIDIGQIEGAFVQGLGWVALEELKWGDAAHKWIKPGSLLTCGPGSYKIPSIND 1262
Query: 1280 VPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLD 1339
+P + NVSLLKG+PN KAIHSSKAVGEPPFFLA+S FFAIK+AI AAR++ G T WFPL+
Sbjct: 1263 MPFQLNVSLLKGNPNAKAIHSSKAVGEPPFFLAASAFFAIKEAIKAARSEVGLTNWFPLE 1322
Query: 1340 NPATPERIRMACLDEFTAPFINSEYRPKLSV 1370
PATPERIRMAC DEF+APF NS++ PKLSV
Sbjct: 1323 TPATPERIRMACFDEFSAPFANSDFCPKLSV 1353
|
|
| UNIPROTKB|P47990 XDH "Xanthine dehydrogenase/oxidase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 2979 (1053.7 bits), Expect = 1.5e-310, P = 1.5e-310
Identities = 621/1353 (45%), Positives = 847/1353 (62%)
Query: 20 EAILYVNGLRKVLPDGLAHLTLLEYLR-DIXXXXXXXXXXXXXXXXXXVMVSRYDKKSKK 78
E + +VNG + V D TLL YLR + VM+S+YD KK
Sbjct: 9 ELVFFVNGKKVVEKDVDPETTLLTYLRRKLGLCGTKLGCGEGGCGACTVMISKYDPFQKK 68
Query: 79 CVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSM 138
+H NACL P+ +L + V TVEG+GN K LHP QE + +SHGSQCGFCTPG +MSM
Sbjct: 69 ILHHTANACLFPICALHHVAVTTVEGIGNTKSRLHPAQERIAKSHGSQCGFCTPGIVMSM 128
Query: 139 YSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDAL--YTNMSSMSLKE 196
Y+LLR+ P E+ IE++ GNLCRCTGYRPI++ +R FA ++ N + +
Sbjct: 129 YTLLRNKPKPKMED-IEDAFQGNLCRCTGYRPILEGYRTFAVDSNCCGKAANGTGCCHSK 187
Query: 197 GEFVCPSTGKPCSCGMKNVSNADTC---EKSVACGKTYEPVSYSEIDGSTYTEKELIFPP 253
GE S C CG K +N C EK + SE T+ E IFPP
Sbjct: 188 GE---NSMNGGC-CGGK--ANGPGCCMNEKENVTMMSSSLFDSSEFQPLDPTQ-EPIFPP 240
Query: 254 ELLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQ 311
EL+ +++ F G + W +P LQ L+ LKS+YP++KL+VGNTEVGIEMRLK M
Sbjct: 241 ELMTQRNKEQKQVCFKGERVMWIQPTTLQELVALKSQYPNAKLVVGNTEVGIEMRLKNML 300
Query: 312 YQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQI 371
Y V+++ +PE+N + + G+ GAA L+ + ++ RK V E P+++T +A +EQ+
Sbjct: 301 YPVILAPAWIPEMNAVQQTETGITFGAACTLSSVEEVLRKAVAELPSYKTEIFQAALEQL 360
Query: 372 KWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYR 431
+WFAG QI+NVA++GGNI TASPISDLNP+ MASG+K ++ +G M E+FF GYR
Sbjct: 361 RWFAGPQIRNVAALGGNIMTASPISDLNPVLMASGSKLTLISMEGKRTVMMDEKFFTGYR 420
Query: 432 KVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDA 491
K + E+LLS+ +P+++ E+ FKQA+RR+DDIA+V GMRV + V +
Sbjct: 421 KTIVKPEEVLLSVEIPYSKEGEYFSAFKQAYRREDDIAIVTCGMRVLFQHGTSR--VQEV 478
Query: 492 LLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDXXXXXX 551
L YGG+AP ++ A KT + G+ W+++LLQ+A ++L ++ L APGGMV+
Sbjct: 479 KLSYGGMAPTTILALKTCRELAGRDWNEKLLQDACRLLAGEMDLSPSAPGGMVEFRRTLT 538
Query: 552 XXXXXXXXXWV----SHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITKHGT-- 605
V S G N++ E VP ++SA + FH+ I Q ++ G
Sbjct: 539 LSFFFKFYLTVLQKLSKDQNGPNNLCEPVPPNYISATELFHKDPIASTQLFQEVPRGQLV 598
Query: 606 --SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSP 663
+VG P VHLS+ Q GEA Y DD P N L+ LV S + HA+ILSID S A+S P
Sbjct: 599 EDTVGRPLVHLSAAKQACGEAVYCDDIPHYENELYLTLVTSTQAHAKILSIDASEAQSVP 658
Query: 664 GFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKLASRKVQVE 723
GFV A+DV G N G + DE +FA + A+T E ++ A++ V+++
Sbjct: 659 GFVCFVSAKDVPGSNITG-IANDETVFAEDVVTCVGHIIGAVIADTQEHSRRAAKAVKIK 717
Query: 724 YEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLE 783
YEEL I++IQEAI+ +SF +R +KGDV+ F+ + D I+EGE+ +GGQEHFYLE
Sbjct: 718 YEELKPIVTIQEAIEQQSFIKPIKR-IKKGDVNKGFE--ESDHILEGEMHIGGQEHFYLE 774
Query: 784 PHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRS 843
H ++ E+ + STQ K Q++ + LG+P +++V + KR+GGGFGGKETR+
Sbjct: 775 THCTLAVPKGEDGEMELFVSTQNLMKTQEFTASALGVPSNRIVVRVKRMGGGFGGKETRN 834
Query: 844 AFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYN 903
+ V +F RPV LDRD DM+ISG RH FLG+YKVGF GK+ +L++ Y+
Sbjct: 835 TILTTVVAVAAFKTGRPVRCMLDRDEDMLISGGRHPFLGRYKVGFMKNGKIKSLEVSYYS 894
Query: 904 NAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITEN 963
N GNS DLS V++RA+ H DN Y IPNV IMG +C TN SNTAFRGFGGPQGM+I E
Sbjct: 895 NGGNSADLSHGVMDRALLHLDNSYNIPNVSIMGFICKTNLSSNTAFRGFGGPQGMMIAEC 954
Query: 964 WIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVD 1023
W+ +A + PEE+R+IN EG + H+ Q+L+ TL W+E S ++ +K ++
Sbjct: 955 WMSDLARKCGLPPEEVRKINLYHEGDLTHFNQKLEGFTLRRCWDECLSSSNYHARKKLIE 1014
Query: 1024 NFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTK 1083
FN NRWKKRG+ ++PTKFGISFT+ +NQAGALVHVYTDG+VL+THGG EMGQGLHTK
Sbjct: 1015 EFNKQNRWKKRGMCIIPTKFGISFTVPFLNQAGALVHVYTDGSVLLTHGGTEMGQGLHTK 1074
Query: 1084 VAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIA 1143
+ QVA+ + IP S +++SETST+ VPN DI G AV +AC+ I R+EPI
Sbjct: 1075 MIQVASRSLGIPTSKIYISETSTNTVPNTSPTAASVSADINGMAVHNACQTILKRLEPIK 1134
Query: 1144 SKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEID 1203
+ S+ + Y I LSA GFY P++ +++ T KG PF YF+YG A +EVEID
Sbjct: 1135 QSNLKGSWEDWIKTAYENCISLSATGFYRIPDVGYNFETNKGKPFHYFSYGVACSEVEID 1194
Query: 1204 TLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGC 1263
LTGD ++++D+G SLNPAID+GQIEGAF+QG+G +EEL++ P G
Sbjct: 1195 CLTGDHKNIRTDIVMDVGTSLNPAIDIGQIEGAFVQGIGLFTMEELRYS-------PEGN 1247
Query: 1264 LYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAI 1323
LYT GPG YKIP+ D+P +F VSLL+ PN KAI+SSKAVGEPP FL++SVF+AIKDAI
Sbjct: 1248 LYTRGPGMYKIPAFGDIPTEFYVSLLRDCPNSKAIYSSKAVGEPPLFLSASVFYAIKDAI 1307
Query: 1324 SAARADAGHTGWFPLDNPATPERIRMACLDEFT 1356
+AR D+G T F LD+PATPERIR AC+D FT
Sbjct: 1308 YSAREDSGVTEPFRLDSPATPERIRNACVDTFT 1340
|
|
| UNIPROTKB|F1NIY2 XDH "Xanthine dehydrogenase/oxidase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 2953 (1044.6 bits), Expect = 8.8e-308, P = 8.8e-308
Identities = 614/1333 (46%), Positives = 837/1333 (62%)
Query: 40 TLLEYLR-DIXXXXXXXXXXXXXXXXXXVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMH 98
TLL YLR + VM+S+YD KK +H NACL P+ +L +
Sbjct: 12 TLLTYLRRKLGLCGTKLGCGEGGCGACTVMISKYDPFQKKILHHTANACLFPICALHHVA 71
Query: 99 VITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESL 158
V TVEG+GN K LHP QE + +SHGSQCGFCTPG +MSMY+LLR+ P E+ IE++
Sbjct: 72 VTTVEGIGNTKSRLHPAQERIAKSHGSQCGFCTPGIVMSMYTLLRNKPKPKMED-IEDAF 130
Query: 159 AGNLCRCTGYRPIVDAFRVFAKTNDAL--YTNMSSMSLKEGEFVCPSTGKPCSCGMKNVS 216
GNLCRCTGYRPI++ +R FA ++ N + +GE S C CG K +
Sbjct: 131 QGNLCRCTGYRPILEGYRTFAVDSNCCGKAANGTGCCHSKGE---NSMNGGC-CGGK--A 184
Query: 217 NADTC---EKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLRKSNPLNLSGFGG--L 271
N C EK + SE T+ E IFPPEL+ +++ F G +
Sbjct: 185 NGPGCCMNEKENVTMMSSSLFDSSEFQPLDPTQ-EPIFPPELMTQRNKEQKQVCFKGERV 243
Query: 272 KWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKD 331
W +P LQ L+ LKS+YP++KL+VGNTEVGIEMRLK M Y V+++ +PE+N + +
Sbjct: 244 MWIQPTTLQELVALKSQYPNAKLVVGNTEVGIEMRLKNMLYPVILAPAWIPEMNAVQQTE 303
Query: 332 DGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT 391
G+ GAA L+ + ++ RK V E P+++T +A +EQ++WFAG QI+NVA++GGNI T
Sbjct: 304 TGITFGAACTLSSVEEVLRKAVAELPSYKTEIFQAALEQLRWFAGPQIRNVAALGGNIMT 363
Query: 392 ASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRP 451
ASPISDLNP+ MASG+K ++ +G M E+FF GYRK + E+LLS+ +P+++
Sbjct: 364 ASPISDLNPVLMASGSKLTLISMEGKRTVMMDEKFFTGYRKTIVKPEEVLLSVEIPYSKE 423
Query: 452 FEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTF 511
E+ FKQA+RR+DDIA+V GMRV + V + L YGG+AP ++ A KT
Sbjct: 424 GEYFSAFKQAYRREDDIAIVTCGMRVLFQHGTSR--VQEVKLSYGGMAPTTILALKTCRE 481
Query: 512 IVGKSWSQELLQNALKILQTDIILKEDAPGGMVDXXXXXXXXXXXXXXXWV----SHQME 567
+ G+ W+++LLQ+A ++L ++ L APGGMV+ V S
Sbjct: 482 LAGRDWNEKLLQDACRLLAGEMDLSPSAPGGMVEFRRTLTLSFFFKFYLTVLQKLSKDQN 541
Query: 568 GKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITKHGT----SVGSPEVHLSSRLQVTGE 623
G N++ E VP ++SA + FH+ I Q ++ G +VG P VHLS+ Q GE
Sbjct: 542 GPNNLCEPVPPNYISATELFHKDPIASTQLFQEVPRGQLVEDTVGQPLVHLSAAKQACGE 601
Query: 624 AEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPV 683
A Y DD P N L+ LV S + HA+ILSID S A+S PGFV A+DV G N G +
Sbjct: 602 AVYCDDIPHYENELYLTLVTSTQAHAKILSIDASEAQSVPGFVCFVSAKDVPGSNITG-I 660
Query: 684 VADEELFASEXXXXXXXXXXXXXAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFH 743
DE +FA + A+T E ++ A++ V+++YEEL I++IQEAI+ +SF
Sbjct: 661 ANDETVFAEDVVTCVGHIIGAVIADTQEHSRRAAKAVKIKYEELKPIVTIQEAIEQQSFI 720
Query: 744 PNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISS 803
+R +KGDV+ F+ + D I+EGE+ +GGQEHFYLE H ++ E+ + S
Sbjct: 721 KPIKR-IKKGDVNKGFE--ESDHILEGEMHIGGQEHFYLETHCTLAVPKGEDGEMELFVS 777
Query: 804 TQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNL 863
TQ K Q++ + LG+P +++V + KR+GGGFGGKETR+ + V +F RPV
Sbjct: 778 TQNLMKTQEFTASALGVPSNRIVVRVKRMGGGFGGKETRNTILTTVVAVAAFKTGRPVRC 837
Query: 864 TLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHS 923
LDRD DM+ISG RH FLG+YKVGF GK+ +L++ Y+N GNS DLS V++RA+ H
Sbjct: 838 MLDRDEDMLISGGRHPFLGRYKVGFMKNGKIKSLEVSYYSNGGNSADLSHGVMDRALLHL 897
Query: 924 DNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREIN 983
DN Y IPNV MG +C TN SNTAFRGFGGPQGM+I E W+ +A + PEE+R+IN
Sbjct: 898 DNSYNIPNVSSMGFICKTNLSSNTAFRGFGGPQGMMIAECWMSDLARKCGLPPEEVRKIN 957
Query: 984 FQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKF 1043
EG + H+ Q+L+ TL W+E S ++ +K ++ FN NRWKKRG+ ++PTKF
Sbjct: 958 LYHEGDLTHFNQKLEGFTLRRCWDECLSSSNYHARKKLIEEFNKQNRWKKRGMCVIPTKF 1017
Query: 1044 GISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSE 1103
GISFT+ +NQAGALVHVYTDG+VL+THGG EMGQGLHTK+ QVA+ + IP S +++SE
Sbjct: 1018 GISFTVPFLNQAGALVHVYTDGSVLLTHGGTEMGQGLHTKMIQVASRSLGIPTSKIYISE 1077
Query: 1104 TSTDKVPNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRI 1163
TST+ VPN DI G AV +AC+ I R+EPI + S+ + Y I
Sbjct: 1078 TSTNTVPNTSPTAASVSADINGMAVHNACQTILKRLEPIKQSNLKGSWEDWIKTAYENCI 1137
Query: 1164 DLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYS 1223
LSA GFY P++ +++ T KG PF YF+YG A +EVEID LTGD ++++D+G S
Sbjct: 1138 SLSATGFYRIPDVGYNFETNKGKPFHYFSYGVACSEVEIDCLTGDHKNIRTDIVMDVGTS 1197
Query: 1224 LNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLK 1283
LNPAID+GQIEGAF+QG+G +EEL++ P G LYT GPG YKIP+ D+P +
Sbjct: 1198 LNPAIDIGQIEGAFVQGIGLFTMEELRYS-------PEGNLYTRGPGMYKIPAFGDIPTE 1250
Query: 1284 FNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPAT 1343
F VSLL+ PN KAI+SSKAVGEPP FL++SVF+AIKDAI +AR D+G T F LD+PAT
Sbjct: 1251 FYVSLLRDCPNSKAIYSSKAVGEPPLFLSASVFYAIKDAIYSAREDSGVTEPFRLDSPAT 1310
Query: 1344 PERIRMACLDEFT 1356
PERIR AC+D FT
Sbjct: 1311 PERIRNACVDTFT 1323
|
|
| UNIPROTKB|F1P4T0 XDH "Xanthine dehydrogenase/oxidase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 2951 (1043.9 bits), Expect = 1.4e-307, P = 1.4e-307
Identities = 609/1328 (45%), Positives = 837/1328 (63%)
Query: 40 TLLEYLR-DIXXXXXXXXXXXXXXXXXXVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMH 98
TLL YLR + VM+S+YD KK +H NACL P+ +L +
Sbjct: 27 TLLTYLRRKLGLCGTKLGCGEGGCGACTVMISKYDPFQKKILHHTANACLFPICALHHVA 86
Query: 99 VITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESL 158
V TVEG+GN K LHP QE + +SHGSQCGFCTPG +MSMY+LLR+ P E+ IE++
Sbjct: 87 VTTVEGIGNTKSRLHPAQERIAKSHGSQCGFCTPGIVMSMYTLLRNKPKPKMED-IEDAF 145
Query: 159 AGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNA 218
GNLCRCTGYRPI++ +R FA + +N + G C S G+ M++V
Sbjct: 146 QGNLCRCTGYRPILEGYRTFA-----VDSNCCGKAAN-GTGCCHSKGEN---SMRSVPPG 196
Query: 219 DTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLRKSNPLNLSGFGG--LKWYRP 276
S C ++ + +D + +E IFPPEL+ +++ F G + W +P
Sbjct: 197 -----SARCNTLFDSSEFQPLDPT----QEPIFPPELMTQRNKEQKQVCFKGERVMWIQP 247
Query: 277 LKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEI 336
LQ L+ LKS+YP++KL+VGNTEVGIEMRLK M Y V+++ +PE+N + + G+
Sbjct: 248 TTLQELVALKSQYPNAKLVVGNTEVGIEMRLKNMLYPVILAPAWIPEMNAVQQTETGITF 307
Query: 337 GAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPIS 396
GAA L+ + ++ RK V E P+++T +A +EQ++WFAG QI+NVA++GGNI TASPIS
Sbjct: 308 GAACTLSSVEEVLRKAVAELPSYKTEIFQAALEQLRWFAGPQIRNVAALGGNIMTASPIS 367
Query: 397 DLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVK 456
DLNP+ MASG+K ++ +G M E+FF GYRK + E+LLS+ +P+++ E+
Sbjct: 368 DLNPVLMASGSKLTLISMEGKRTVMMDEKFFTGYRKTIVKPEEVLLSVEIPYSKEGEYFS 427
Query: 457 EFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKS 516
FKQA+RR+DDIA+V GMRV + V + L YGG+AP ++ A KT + G+
Sbjct: 428 AFKQAYRREDDIAIVTCGMRVLFQHGTSR--VQEVKLSYGGMAPTTILALKTCRELAGRD 485
Query: 517 WSQELLQNALKILQTDIILKEDAPGGMVDXXXXXXXXXXXXXXXWV----SHQMEGKNSI 572
W+++LLQ+A ++L ++ L APGGMV+ V S G N++
Sbjct: 486 WNEKLLQDACRLLAGEMDLSPSAPGGMVEFRRTLTLSFFFKFYLTVLQKLSKDQNGPNNL 545
Query: 573 KESVPSTHLSAMQSFHRPSIIGNQDYEITKHGT----SVGSPEVHLSSRLQVTGEAEYTD 628
E VP ++SA + FH+ I Q ++ G +VG P VHLS+ Q GEA Y D
Sbjct: 546 CEPVPPNYISATELFHKDPIASTQLFQEVPRGQLVEDTVGQPLVHLSAAKQACGEAVYCD 605
Query: 629 DTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEE 688
D P N L+ LV S + HA+ILSID S A+S PGFV A+DV G N G + DE
Sbjct: 606 DIPHYENELYLTLVTSTQAHAKILSIDASEAQSVPGFVCFVSAKDVPGSNITG-IANDET 664
Query: 689 LFASEXXXXXXXXXXXXXAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTER 748
+FA + A+T E ++ A++ V+++YEEL I++IQEAI+ +SF +R
Sbjct: 665 VFAEDVVTCVGHIIGAVIADTQEHSRRAAKAVKIKYEELKPIVTIQEAIEQQSFIKPIKR 724
Query: 749 CFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQ 808
+KGDV+ F+ + D I+EGE+ +GGQEHFYLE H ++ E+ + STQ
Sbjct: 725 -IKKGDVNKGFE--ESDHILEGEMHIGGQEHFYLETHCTLAVPKGEDGEMELFVSTQNLM 781
Query: 809 KHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRD 868
K Q++ + LG+P +++V + KR+GGGFGGKETR+ + V +F RPV LDRD
Sbjct: 782 KTQEFTASALGVPSNRIVVRVKRMGGGFGGKETRNTILTTVVAVAAFKTGRPVRCMLDRD 841
Query: 869 IDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYE 928
DM+ISG RH FLG+YKVGF GK+ +L++ Y+N GNS DLS V++RA+ H DN Y
Sbjct: 842 EDMLISGGRHPFLGRYKVGFMKNGKIKSLEVSYYSNGGNSADLSHGVMDRALLHLDNSYN 901
Query: 929 IPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEG 988
IPNV MG +C TN SNTAFRGFGGPQGM+I E W+ +A + PEE+R+IN EG
Sbjct: 902 IPNVSSMGFICKTNLSSNTAFRGFGGPQGMMIAECWMSDLARKCGLPPEEVRKINLYHEG 961
Query: 989 SILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFT 1048
+ H+ Q+L+ TL W+E S ++ +K ++ FN NRWKKRG+ ++PTKFGISFT
Sbjct: 962 DLTHFNQKLEGFTLRRCWDECLSSSNYHARKKLIEEFNKQNRWKKRGMCVIPTKFGISFT 1021
Query: 1049 LKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDK 1108
+ +NQAGALVHVYTDG+VL+THGG EMGQGLHTK+ QVA+ + IP S +++SETST+
Sbjct: 1022 VPFLNQAGALVHVYTDGSVLLTHGGTEMGQGLHTKMIQVASRSLGIPTSKIYISETSTNT 1081
Query: 1109 VPNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAH 1168
VPN DI G AV +AC+ I R+EPI + S+ + Y I LSA
Sbjct: 1082 VPNTSPTAASVSADINGMAVHNACQTILKRLEPIKQSNLKGSWEDWIKTAYENCISLSAT 1141
Query: 1169 GFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAI 1228
GFY P++ +++ T KG PF YF+YG A +EVEID LTGD ++++D+G SLNPAI
Sbjct: 1142 GFYRIPDVGYNFETNKGKPFHYFSYGVACSEVEIDCLTGDHKNIRTDIVMDVGTSLNPAI 1201
Query: 1229 DVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSL 1288
D+GQIEGAF+QG+G +EEL++ P G LYT GPG YKIP+ D+P +F VSL
Sbjct: 1202 DIGQIEGAFVQGIGLFTMEELRYS-------PEGNLYTRGPGMYKIPAFGDIPTEFYVSL 1254
Query: 1289 LKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1348
L+ PN KAI+SSKAVGEPP FL++SVF+AIKDAI +AR D+G T F LD+PATPERIR
Sbjct: 1255 LRDCPNSKAIYSSKAVGEPPLFLSASVFYAIKDAIYSAREDSGVTEPFRLDSPATPERIR 1314
Query: 1349 MACLDEFT 1356
AC+D FT
Sbjct: 1315 NACVDTFT 1322
|
|
| UNIPROTKB|F1P4S9 XDH "Xanthine dehydrogenase/oxidase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 2611 (924.2 bits), Expect = 1.9e-307, Sum P(2) = 1.9e-307
Identities = 528/1120 (47%), Positives = 726/1120 (64%)
Query: 247 KELIFPPELLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIE 304
+E IFPPEL+ +++ F G + W +P LQ L+ LKS+YP++KL+VGNTEVGIE
Sbjct: 210 QEPIFPPELMTQRNKEQKQVCFKGERVMWIQPTTLQELVALKSQYPNAKLVVGNTEVGIE 269
Query: 305 MRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSC 364
MRLK M Y V+++ +PE+N + + G+ GAA L+ + ++ RK V E P+++T
Sbjct: 270 MRLKNMLYPVILAPAWIPEMNAVQQTETGITFGAACTLSSVEEVLRKAVAELPSYKTEIF 329
Query: 365 KAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAE 424
+A +EQ++WFAG QI+NVA++GGNI TASPISDLNP+ MASG+K ++ +G M E
Sbjct: 330 QAALEQLRWFAGPQIRNVAALGGNIMTASPISDLNPVLMASGSKLTLISMEGKRTVMMDE 389
Query: 425 EFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDE 484
+FF GYRK + E+LLS+ +P+++ E+ FKQA+RR+DDIA+V GMRV +
Sbjct: 390 KFFTGYRKTIVKPEEVLLSVEIPYSKEGEYFSAFKQAYRREDDIAIVTCGMRVLFQHGTS 449
Query: 485 EWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMV 544
V + L YGG+AP ++ A KT + G+ W+++LLQ+A ++L ++ L APGGMV
Sbjct: 450 R--VQEVKLSYGGMAPTTILALKTCRELAGRDWNEKLLQDACRLLAGEMDLSPSAPGGMV 507
Query: 545 DXXXXXXXXXXXXXXXWV----SHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEI 600
+ V S G N++ E VP ++SA + FH+ I Q ++
Sbjct: 508 EFRRTLTLSFFFKFYLTVLQKLSKDQNGPNNLCEPVPPNYISATELFHKDPIASTQLFQE 567
Query: 601 TKHGT----SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDD 656
G +VG P VHLS+ Q GEA Y DD P N L+ LV S + HA+ILSID
Sbjct: 568 VPRGQLVEDTVGQPLVHLSAAKQACGEAVYCDDIPHYENELYLTLVTSTQAHAKILSIDA 627
Query: 657 SGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKLA 716
S A+S PGFV A+DV G N G + DE +FA + A+T E ++ A
Sbjct: 628 SEAQSVPGFVCFVSAKDVPGSNITG-IANDETVFAEDVVTCVGHIIGAVIADTQEHSRRA 686
Query: 717 SRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGG 776
++ V+++YEEL I++IQEAI+ +SF +R +KGDV+ F+ + D I+EGE+ +GG
Sbjct: 687 AKAVKIKYEELKPIVTIQEAIEQQSFIKPIKR-IKKGDVNKGFE--ESDHILEGEMHIGG 743
Query: 777 QEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGF 836
QEHFYLE H ++ E+ + STQ K Q++ + LG+P +++V + KR+GGGF
Sbjct: 744 QEHFYLETHCTLAVPKGEDGEMELFVSTQNLMKTQEFTASALGVPSNRIVVRVKRMGGGF 803
Query: 837 GGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLA 896
GGKETR+ + V +F RPV LDRD DM+ISG RH FLG+YKVGF GK+ +
Sbjct: 804 GGKETRNTILTTVVAVAAFKTGRPVRCMLDRDEDMLISGGRHPFLGRYKVGFMKNGKIKS 863
Query: 897 LDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQ 956
L++ Y+N GNS DLS V++RA+ H DN Y IPNV MG +C TN SNTAFRGFGGPQ
Sbjct: 864 LEVSYYSNGGNSADLSHGVMDRALLHLDNSYNIPNVSSMGFICKTNLSSNTAFRGFGGPQ 923
Query: 957 GMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFL 1016
GM+I E W+ +A + PEE+R+IN EG + H+ Q+L+ TL W+E S ++
Sbjct: 924 GMMIAECWMSDLARKCGLPPEEVRKINLYHEGDLTHFNQKLEGFTLRRCWDECLSSSNYH 983
Query: 1017 NARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEM 1076
+K ++ FN NRWKKRG+ ++PTKFGISFT+ +NQAGALVHVYTDG+VL+THGG EM
Sbjct: 984 ARKKLIEEFNKQNRWKKRGMCVIPTKFGISFTVPFLNQAGALVHVYTDGSVLLTHGGTEM 1043
Query: 1077 GQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYGAAVLDACEQIK 1136
GQGLHTK+ QVA+ + IP S +++SETST+ VPN DI G AV +AC+ I
Sbjct: 1044 GQGLHTKMIQVASRSLGIPTSKIYISETSTNTVPNTSPTAASVSADINGMAVHNACQTIL 1103
Query: 1137 ARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAA 1196
R+EPI + S+ + Y I LSA GFY P++ +++ T KG PF YF+YG A
Sbjct: 1104 KRLEPIKQSNLKGSWEDWIKTAYENCISLSATGFYRIPDVGYNFETNKGKPFHYFSYGVA 1163
Query: 1197 FAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAH 1256
+EVEID LTGD ++++D+G SLNPAID+GQIEGAF+QG+G +EEL++
Sbjct: 1164 CSEVEIDCLTGDHKNIRTDIVMDVGTSLNPAIDIGQIEGAFVQGIGLFTMEELRYS---- 1219
Query: 1257 KWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVF 1316
P G LYT GPG YKIP+ D+P +F VSLL+ PN KAI+SSKAVGEPP FL++SVF
Sbjct: 1220 ---PEGNLYTRGPGMYKIPAFGDIPTEFYVSLLRDCPNSKAIYSSKAVGEPPLFLSASVF 1276
Query: 1317 FAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDEFT 1356
+AIKDAI +AR D+G T F LD+PATPERIR AC+D FT
Sbjct: 1277 YAIKDAIYSAREDSGVTEPFRLDSPATPERIRNACVDTFT 1316
|
|
| DICTYBASE|DDB_G0291047 xdh "xanthine dehydrogenase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 2929 (1036.1 bits), Expect = 3.1e-305, P = 3.1e-305
Identities = 616/1374 (44%), Positives = 857/1374 (62%)
Query: 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIXXXXXXXXXXXXXXXXXXVMVSRY---DKKS 76
+ + ++NG + ++ + L+ L+Y+R I M+S D +
Sbjct: 19 QLLFFLNGEKVLINEPNPELSTLDYIRSIGLTGLKRGCSEGACGSCTFMLSNVVKDDNDT 78
Query: 77 KKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIM 136
+ VH AVN CL PL +L+GM V T+EG+GN GLH IQE + + GSQCGFCTPG IM
Sbjct: 79 FRIVHRAVNGCLYPLCALDGMAVTTIEGLGNIDKGLHSIQERISENSGSQCGFCTPGIIM 138
Query: 137 SMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK--TNDALYT----NMS 190
++Y+ LRS+ T++ IE++ GNLCRCTGYRPI+DA + FA +++ L M+
Sbjct: 139 ALYAFLRSNPNS-TQKDIEQNFDGNLCRCTGYRPILDAAKSFANQPSDEQLVELPLPPMA 197
Query: 191 SMSLKEGE--FVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKE 248
++ K+ + +CP TGKPC+C K ++ P E++ E
Sbjct: 198 TIDDKKDDTQMICPGTGKPCNCKTKT---------------SHIPNKPMELNS------E 236
Query: 249 LIFPPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLK 308
IFPP L+ K L +G + WY P L+ LL++K + ++K++VGNTE+GIE R +
Sbjct: 237 PIFPPFLMEYKKESLKFTG-SRVTWYTPTTLEELLKIKKEKTNAKIVVGNTEIGIETRFR 295
Query: 309 RMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSS----- 363
+ Y +I T V EL + +D+G+ +GA+V LTE+ ++ E ++
Sbjct: 296 SIVYPTIICPTRVEELIQIQKEDNGVRVGASVTLTEMKSYLNGIIKSSENDEIANKKNGT 355
Query: 364 CKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGN---IRT 420
KA I Q+KWFAG Q++N AS+GGN+CTASPISDLNP+ +A+GA +V N +R
Sbjct: 356 FKAIISQLKWFAGNQVRNAASIGGNLCTASPISDLNPVLLAAGAVLTMVSLDDNGAKVRR 415
Query: 421 TMA-EEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYL 479
+ +FFL YR VD+ EIL S+F+P+TRP EF++ +KQ+ RR+DDIA+V+ RV L
Sbjct: 416 QVPINQFFLRYRVVDIKPEEILESVFIPYTRPLEFIQAYKQSRRREDDIAIVSCCFRVLL 475
Query: 480 E---EK-----DEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQT 531
E E D + + D +L YGG+ +++ +KT+ ++G WS+ELL +A L++
Sbjct: 476 EPIAESASNTVDSNFKIKDCVLAYGGMNVKAVTCEKTEKQLIGSVWSRELLNDACLNLES 535
Query: 532 DIILKEDAPGGMVDXXXXXXXXXXXXXXXWVS---HQMEGKNSIKESVPSTHLSAMQSFH 588
D+ L APGGM++ VS +Q+ N + V SA ++
Sbjct: 536 DLPLAAGAPGGMIEYRRSLTTGFFFKYFLTVSKQLYQISNGNPLY-LVSDKEKSATDAYS 594
Query: 589 RPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPH 648
RP G Q+Y+ + P H S+ QVTGEA Y DD M L+A +V S + H
Sbjct: 595 RPLSFGEQNYQTQPDKHPITQPIKHQSADKQVTGEALYVDDVKM--KSLYAVMVPSLKAH 652
Query: 649 ARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAE 708
A I S+D S A +PG F A+D+ G N GPV+ DEE+F ++ AE
Sbjct: 653 ANIKSVDASKALKAPGVKAFFSAKDIPGINDCGPVIHDEEVFVTKTALFHGAPIGCIVAE 712
Query: 709 THEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKII 768
TH +A AS+ V +EYEELPAI SI++AI +SF P T + GD++ + + D II
Sbjct: 713 THIQALEASKLVAIEYEELPAITSIEDAISKQSFFPFTH-LLKDGDMEKGWS--ESDHII 769
Query: 769 EGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCK 828
+GE +VG QEHFYLEP+ ++V G E+ +ISSTQ P K Q V+ VLG+ ++VVCK
Sbjct: 770 DGEFKVGAQEHFYLEPNGTLV-IPGEGKELTVISSTQNPTKTQAIVASVLGIGQNQVVCK 828
Query: 829 TKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGF 888
KR+GGGFGGKETRS F + S+ + PV + LDRD DM +G RH F+ +Y+VGF
Sbjct: 829 LKRLGGGFGGKETRSIFSSCVAAIASYHMKEPVRIILDRDTDMSTTGTRHPFIARYRVGF 888
Query: 889 TNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTA 948
T EG + ALDLE+Y +AG S D+S+ VL+RA+FHS+N Y+IPNV I+G +C TN PSNTA
Sbjct: 889 TKEGLIKALDLELYADAGFSYDISVGVLDRAIFHSENSYKIPNVNILGRLCKTNLPSNTA 948
Query: 949 FRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNE 1008
FRG+GGPQ M+I ENW+++++ + +IRE+NF E + Y Q + + + +W+E
Sbjct: 949 FRGYGGPQAMIICENWVEKISKTLGMDSYKIRELNFYKEAEVTAYRQSVVNNMMKRVWDE 1008
Query: 1009 LKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVL 1068
L + ++ V+ FN NR+KKRGI+++PTKFG+SFT+K +NQAGALVHVYTDGT+L
Sbjct: 1009 LMVKSNYHQRLIAVEKFNKENRYKKRGISIIPTKFGMSFTVKTLNQAGALVHVYTDGTIL 1068
Query: 1069 VTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYGAAV 1128
VTHGG EMGQGL+TK+ Q+AA AFN+P+S VF+SETSTDKVPN D+ G AV
Sbjct: 1069 VTHGGTEMGQGLNTKMIQIAARAFNVPVSDVFISETSTDKVPNTAPTAASVSSDLNGMAV 1128
Query: 1129 LDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDF---DWITGKG 1185
LDAC+QI RMEPI K+ F +L + C+V+R++LSA+GFY TP + + D G+G
Sbjct: 1129 LDACQQILLRMEPIREKNPNVPFKQLCTLCFVERVNLSANGFYATPNVGYMFKDSGVGEG 1188
Query: 1186 NPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLA 1245
PF YF +GAA +EVEIDTLTGD T ++VILD+G SLNP ID+GQ+EGAF+QG+GW
Sbjct: 1189 TPFNYFNFGAACSEVEIDTLTGDHTTLRSDVILDVGDSLNPTIDIGQVEGAFVQGMGWST 1248
Query: 1246 LEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVG 1305
LEE+ P G ++T GP +YKIP NDVP++FNVSLL PN KAIHSSK VG
Sbjct: 1249 LEEVVT-------FPSGYMFTRGPSTYKIPGFNDVPIEFNVSLLGDAPNPKAIHSSKGVG 1301
Query: 1306 EPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPF 1359
EPP FL SSV+FAI+ AI+AAR + T WF L +PAT ERIR +CLD F F
Sbjct: 1302 EPPLFLGSSVYFAIRQAITAARLENNLTNWFDLQSPATCERIRTSCLDNFVLQF 1355
|
|
| ZFIN|ZDB-GENE-070719-9 xdh "xanthine dehydrogenase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 2895 (1024.1 bits), Expect = 1.2e-301, P = 1.2e-301
Identities = 609/1370 (44%), Positives = 840/1370 (61%)
Query: 6 NEEEMEQMGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLR-DIXXXXXXXXXXXXXXXX 64
+E++++ + + + +VNG + + +TLL YLR +
Sbjct: 4 SEDKIKNKLQSPGDDLVFFVNGKKITEKNADPEITLLTYLRRSLGLTGTKLGCAEGGCGA 63
Query: 65 XXVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHG 124
VMVS+Y + +H A+NACLAPL SL V TVEG+G+ LHP+QE + ++HG
Sbjct: 64 CTVMVSKYHPNQNRIIHYAINACLAPLCSLHHCAVTTVEGIGSVASKLHPVQERIAKAHG 123
Query: 125 SQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDA 184
SQCGFCTPG +MSMY+LLR++ P T I+E+ GNLCRCTGYRPI++ +R F K
Sbjct: 124 SQCGFCTPGIVMSMYALLRNNPQP-TMHDIQEAFQGNLCRCTGYRPILEGYRTFTKDGGC 182
Query: 185 LYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSV-ACGKTYEPVSYSEIDGST 243
C + C M N N E S Y+ + +D +
Sbjct: 183 ----------------CGGKSQTNGCCMTN-GNTQEHENSAHPVQHLYDQSEFMPLDPT- 224
Query: 244 YTEKELIFPPELL-LRKSNPLNLSGFGG-LKWYRPLKLQHLLELKSKYPDSKLLVGNTEV 301
+E+IFPPEL+ L K + G + W +P L+ LLELK+ YP++KL+VGNTEV
Sbjct: 225 ---QEIIFPPELVSLSKQTQREMRFVGERVLWIQPCSLKELLELKATYPNAKLVVGNTEV 281
Query: 302 GIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHET 361
GIEM+ K + Y V+++ ++PELN++ DG+E+GA+V LT L + + V + PA++T
Sbjct: 282 GIEMKFKNLLYPVILAPAYIPELNIIQHTQDGIEVGASVTLTVLGDVLQSAVKKLPAYQT 341
Query: 362 SSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTT 421
KA +EQ++WFAG QI+NVA+VGGNI TASPISDLNP++MA+G K ++ KG R
Sbjct: 342 EVFKAVLEQLRWFAGQQIRNVAAVGGNIMTASPISDLNPVFMAAGCKLTVMS-KGEKRVL 400
Query: 422 -MAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLE 480
M ++FF GYRK L EILLSI +P+T+ ++ FKQ+ R++DDI++V GM VY +
Sbjct: 401 EMDDKFFTGYRKTALKPEEILLSIEIPYTKKGQYFSAFKQSPRKEDDISIVTCGMNVYFK 460
Query: 481 EKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAP 540
E+ V + YGG+AP+++ A T ++ + W+++LL+ A L ++ L AP
Sbjct: 461 EQSN--TVQSIRISYGGMAPVTVLATATCNKLLNRQWNEDLLEEACSSLAEEMSLSPSAP 518
Query: 541 GGMVDXXXXXXXXXXXXXXXWVSH------QMEGKNSIKESVP--STHLSAMQSFHRPSI 592
GGMV V H QMEG ++++ P ST Q PS
Sbjct: 519 GGMVTYRRTLTISLFYKFFLTVQHKLAVSLQMEGV-TVEDIQPEFSTATELFQ-VDTPSS 576
Query: 593 IGNQDYEITKHGTS----VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPH 648
+ Q Y+ G + VG P +HLS+ Q TGEA Y DD P N LH ALV S + H
Sbjct: 577 V--QLYQEVPPGQNEDDVVGHPIIHLSALKQATGEAVYCDDMPCYENELHLALVTSTKAH 634
Query: 649 ARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAE 708
A I SID S A S PG V A+D+ G N GPVV DE +FA + A+
Sbjct: 635 ALIKSIDTSSAMSVPGVVAFISAKDIPGSNMTGPVVYDETVFADDKVTCVGHIVGAIVAD 694
Query: 709 THEEAKLASRKVQVEYEEL-PAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKI 767
T A+ A++ V++ YEEL P I++IQ+AI+ KSF R KGDV F+ D I
Sbjct: 695 TQAHAQRAAKVVKISYEELKPVIVTIQDAINNKSFFEPV-RTIEKGDVAQGFKDS--DHI 751
Query: 768 IEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVC 827
+ GE+ +GGQE FYLE + ++ E+ + STQ+ K Q V+ LG+P ++VVC
Sbjct: 752 LHGEMHIGGQEQFYLETNCTLAVPRGEDGEMELFVSTQSASKTQALVAKALGVPANRVVC 811
Query: 828 KTKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVG 887
+ KR+GGGFGGKE+RS + V + + PV LDRD DM+++G RH F G+YKVG
Sbjct: 812 RVKRMGGGFGGKESRSTILSTVVAVAAQKVKCPVRCMLDRDEDMLVTGGRHPFFGQYKVG 871
Query: 888 FTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNT 947
F G+V+AL++ +Y+NAGNSLDLSL++LERA+FH DN Y IPN+ G +C TN PSN+
Sbjct: 872 FMKNGRVMALEVTLYSNAGNSLDLSLSILERALFHMDNSYNIPNICGTGYMCKTNLPSNS 931
Query: 948 AFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWN 1007
AFRGFGGPQGM+I E+W+ VA+ EE+R +N EG + H+ Q+L T+ W
Sbjct: 932 AFRGFGGPQGMMIAESWMSDVALSCGLPAEEVRRMNMYNEGDLTHFNQRLDQFTIARCWE 991
Query: 1008 ELKLSCDFLNARKE-VDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGT 1066
E DF N RK+ V+ +N +RW KRG++++PTKFGISFT +NQAGALVHVY+DG+
Sbjct: 992 ECMQLSDF-NKRKDAVEKYNRQHRWTKRGLSIIPTKFGISFTAVFLNQAGALVHVYSDGS 1050
Query: 1067 VLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYGA 1126
VL+THGG EMGQGLHTK+ QVA+ IP + + ++ETST VPN D+ G
Sbjct: 1051 VLLTHGGTEMGQGLHTKMVQVASKTLEIPCTKIHITETSTSTVPNTSPTAASASSDLNGM 1110
Query: 1127 AVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGN 1186
AV +AC+ I R++P K+ + + +A Y R++LSA+GFY TP++ +D+ T G
Sbjct: 1111 AVYNACQTILQRLQPFKEKNPKGCWEDWVTAAYFDRVNLSANGFYKTPDLGYDFDTNSGR 1170
Query: 1187 PFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLAL 1246
PF YF+YG A +EVEID LTG ++++D+G SLNPA+D+GQ+EG F+QGLG L
Sbjct: 1171 PFNYFSYGVAVSEVEIDCLTGSHKNLHTSIVMDVGKSLNPALDIGQVEGGFMQGLGLFTL 1230
Query: 1247 EELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGE 1306
EEL++ P G LYT GPG YKIP+ D+P + VSLL+ PN KAI SSKAVGE
Sbjct: 1231 EELRYS-------PDGYLYTRGPGMYKIPAFGDIPSELKVSLLRDAPNDKAIFSSKAVGE 1283
Query: 1307 PPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDEFT 1356
PP FLA+SVF+AIKDAI+AARA++G TG F LD+PATPERIR AC D+FT
Sbjct: 1284 PPLFLAASVFYAIKDAITAARAESGLTGPFRLDSPATPERIRNACEDKFT 1333
|
|
| UNIPROTKB|J9JHQ2 XDH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 2500 (885.1 bits), Expect = 3.0e-300, Sum P(2) = 3.0e-300
Identities = 533/1174 (45%), Positives = 718/1174 (61%)
Query: 195 KEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPE 254
K+G S P C ++ C + + + P + +D + +E IFPPE
Sbjct: 165 KDGGCCGGSRDNPNCC----LNQKKDCSRVILSPSLFNPEEFMPLDPT----QEPIFPPE 216
Query: 255 LLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQY 312
LL K P F G + W + L+ LL+LK+++P++KL+VGNTE+GIEM+ K +
Sbjct: 217 LLRLKDVPQKQLCFKGERVTWIQASTLKELLDLKAQHPEAKLVVGNTEIGIEMKFKNRLF 276
Query: 313 QVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIK 372
+++ +PELN + +G+ GAA L+ + K V + PA++T K +EQ++
Sbjct: 277 PMIVCPAWIPELNAVEHGLEGISFGAACPLSIVEKTLHDAVNKLPAYKTEVFKGVLEQLR 336
Query: 373 WFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTT-MAEEFFLGYR 431
WFAG Q+K+VAS+GGNI ASPISDLNP++MAS AK IV +G RT M FF GYR
Sbjct: 337 WFAGKQVKSVASIGGNIINASPISDLNPVFMASEAKLTIVS-RGIKRTVRMDHTFFPGYR 395
Query: 432 KVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDA 491
K L EILLSI +P++R EF FKQA RR+DDIA V +GMRV + V +
Sbjct: 396 KTLLAPEEILLSIEIPYSREGEFFSAFKQASRREDDIAKVTSGMRVLFHPGTAQ--VKEL 453
Query: 492 LLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDXXXXXX 551
L YGG+ ++SA KT V W+++LLQN L ++ L DAPGGMVD
Sbjct: 454 ALCYGGMDDRTISALKTTRKQVENLWNEDLLQNVCAGLAEELKLSPDAPGGMVDFRRTLT 513
Query: 552 XXXXXXXXXWVSHQMEGKNSIKE--SVPSTHLSAMQSFHRPSIIGNQDYEITKHGTS--- 606
V ++E N + + T+ SA F + Q ++ G S
Sbjct: 514 LSFFFKFYLTVLQKLERGNLENKCGKLDPTYASATLLFQKDPPANVQLFQEVPEGQSEED 573
Query: 607 -VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGF 665
VG P HL++ +Q +GEA Y DD P N L LV S R HA+I SID S A PGF
Sbjct: 574 MVGRPLPHLAAAMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKIKSIDTSEAEKVPGF 633
Query: 666 VGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXXXXXXXXAETHEEAKLASRKVQVEYE 725
V DV G N+ G + DE +FA + +T E A+ A++ V++ YE
Sbjct: 634 VCFLSFNDVPGSNKTG-IFNDETIFAEDEVTCIGHIIGAVVTDTPEHAQRAAQGVKITYE 692
Query: 726 ELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPH 785
ELPAI++I++AI SF+ +E KG++ F + D ++ GEV +GGQEHFYLE H
Sbjct: 693 ELPAIITIEDAIKNNSFY-GSELKIEKGELTKGFS--EADNVVSGEVYIGGQEHFYLETH 749
Query: 786 SSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAF 845
++ E+ + +STQ K Q +V+++LG+P+++++ + KR+GGGFGGKETRS
Sbjct: 750 CTIAVPKGEEGELELFASTQNTMKTQAFVANMLGVPINRILVRVKRMGGGFGGKETRSTL 809
Query: 846 IXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNA 905
+ + ++ RPV LDRD DM+I+G RH FL KYKVGF GKV+AL++E Y+NA
Sbjct: 810 VSTVVALAAYKTGRPVRCMLDRDEDMLITGGRHPFLAKYKVGFMKTGKVVALEVEHYSNA 869
Query: 906 GNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWI 965
GN+LDLS +++ERA+FH DN Y+IPN+R G +C TN PSNTAFRGFGGPQGMLI E W+
Sbjct: 870 GNTLDLSQSIMERALFHMDNCYKIPNIRGTGRLCKTNLPSNTAFRGFGGPQGMLIAEYWM 929
Query: 966 QRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARK-EVDN 1024
VA+ EE+R N EG + H+ Q+L+ TL W E S + +ARK EVD
Sbjct: 930 SEVAMTCGLPAEEVRRKNMYKEGDLTHFNQKLEGFTLSRCWEECLASSQY-HARKSEVDK 988
Query: 1025 FNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKV 1084
FN N WKKRG+ ++PTKFGISFTL +NQAGAL+HVYTDG+VL+THGG EMGQGLHTK+
Sbjct: 989 FNEENYWKKRGLCIIPTKFGISFTLSFLNQAGALIHVYTDGSVLLTHGGTEMGQGLHTKM 1048
Query: 1085 AQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXXXXDIYGAAVLDACEQIKARMEPIAS 1144
QVA+ A IP S +++SETST+ VPN DI G AV +AC+ I R+EP
Sbjct: 1049 VQVASRALKIPTSKIYISETSTNTVPNTSPTAASVSADINGQAVYEACKTILKRLEPFKK 1108
Query: 1145 KHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDT 1204
K+ S+ + Y + LSA GFY TP + + + T GNPF YF+YG A +EVEID
Sbjct: 1109 KNPSGSWEDWVIDAYENTVSLSATGFYRTPNLGYSFETNSGNPFHYFSYGVACSEVEIDC 1168
Query: 1205 LTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCL 1264
LTGD ++++D+G SLNPAID+GQ+EGAF+QGLG LEEL + P G L
Sbjct: 1169 LTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYS-------PEGSL 1221
Query: 1265 YTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAIS 1324
T GP +YKIP+ ++P +F VSLL+ PN KAI++SKAVGEPP FLA+SVFFAIKDA+
Sbjct: 1222 QTRGPSTYKIPAFGNIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLAASVFFAIKDAVR 1281
Query: 1325 AARADAGH--TGWFPLDNPATPERIRMACLDEFT 1356
AARA T F LD+PATPE+IR AC+DEFT
Sbjct: 1282 AARARNSDCKTKLFRLDSPATPEKIRNACVDEFT 1315
|
|
| UNIPROTKB|P47989 XDH "Xanthine dehydrogenase/oxidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 2504 (886.5 bits), Expect = 4.9e-300, Sum P(2) = 4.9e-300
Identities = 528/1142 (46%), Positives = 716/1142 (62%)
Query: 231 YEPVSYSEIDGSTYTEKELIFPPELLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSK 288
++P ++ +D + +E IFPPELL K P F G + W + L+ LL+LK++
Sbjct: 196 FKPEEFTPLDPT----QEPIFPPELLRLKDTPRKQLRFEGERVTWIQASTLKELLDLKAQ 251
Query: 289 YPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKM 348
+PD+KL+VGNTE+GIEM+ K M + +++ +PELN + DG+ GAA L+ + K
Sbjct: 252 HPDAKLVVGNTEIGIEMKFKNMLFPMIVCPAWIPELNSVEHGPDGISFGAACPLSIVEKT 311
Query: 349 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAK 408
V + PA +T + +EQ++WFAG Q+K+VASVGGNI TASPISDLNP++MASGAK
Sbjct: 312 LVDAVAKLPAQKTEVFRGVLEQLRWFAGKQVKSVASVGGNIITASPISDLNPVFMASGAK 371
Query: 409 FHIVDCKGNIRTT-MAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDD 467
+V +G RT M FF GYRK L+ EILLSI +P++R E+ FKQA RR+DD
Sbjct: 372 LTLVS-RGTRRTVQMDHTFFPGYRKTLLSPEEILLSIEIPYSREGEYFSAFKQASRREDD 430
Query: 468 IALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALK 527
IA V +GMRV + E V + L YGG+A ++SA KT + K W +ELLQ+
Sbjct: 431 IAKVTSGMRVLFKPGTTE--VQELALCYGGMANRTISALKTTQRQLSKLWKEELLQDVCA 488
Query: 528 ILQTDIILKEDAPGGMVDXXXXXXXXXXXXXXXWVSHQMEGKNSIKES---VPSTHLSAM 584
L ++ L DAPGGMVD V ++ G+ ++++ + T SA
Sbjct: 489 GLAEELHLPPDAPGGMVDFRCTLTLSFFFKFYLTVLQKL-GQENLEDKCGKLDPTFASAT 547
Query: 585 QSFHRPSIIGNQDYEITKHGTS----VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAA 640
F + Q ++ G S VG P HL++ +Q +GEA Y DD P N L
Sbjct: 548 LLFQKDPPADVQLFQEVPKGQSEEDMVGRPLPHLAADMQASGEAVYCDDIPRYENELSLR 607
Query: 641 LVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEXXXXXXX 700
LV S R HA+I SID S A+ PGFV A+DV G N G + DE +FA +
Sbjct: 608 LVTSTRAHAKIKSIDTSEAKKVPGFVCFISADDVPGSNITG-ICNDETVFAKDKVTCVGH 666
Query: 701 XXXXXXAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQ 760
A+T E + A++ V++ YEELPAI++I++AI SF+ E KGD+ F
Sbjct: 667 IIGAVVADTPEHTQRAAQGVKITYEELPAIITIEDAIKNNSFY-GPELKIEKGDLKKGFS 725
Query: 761 SGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGL 820
+ D ++ GE+ +GGQEHFYLE H ++ E+ + STQ K Q +V+ +LG+
Sbjct: 726 --EADNVVSGEIYIGGQEHFYLETHCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGV 783
Query: 821 PMSKVVCKTKRIGGGFGGKETRSAFIXXXXXVPSFLLNRPVNLTLDRDIDMMISGQRHSF 880
P +++V + KR+GGGFGGKETRS + + ++ RPV LDRD DM+I+G RH F
Sbjct: 784 PANRIVVRVKRMGGGFGGKETRSTVVSTAVALAAYKTGRPVRCMLDRDEDMLITGGRHPF 843
Query: 881 LGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCF 940
L +YKVGF G V+AL+++ ++N GN+ DLS +++ERA+FH DN Y+IPN+R G +C
Sbjct: 844 LARYKVGFMKTGTVVALEVDHFSNVGNTQDLSQSIMERALFHMDNCYKIPNIRGTGRLCK 903
Query: 941 TNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHC 1000
TN PSNTAFRGFGGPQGMLI E W+ VAV EE+R N EG + H+ Q+L+
Sbjct: 904 TNLPSNTAFRGFGGPQGMLIAECWMSEVAVTCGMPAEEVRRKNLYKEGDLTHFNQKLEGF 963
Query: 1001 TLFPLWNELKLSCDFLNARK-EVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALV 1059
TL W E S + +ARK EVD FN N WKKRG+ ++PTKFGISFT+ +NQAGAL+
Sbjct: 964 TLPRCWEECLASSQY-HARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALL 1022
Query: 1060 HVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNXXXXXXXX 1119
HVYTDG+VL+THGG EMGQGLHTK+ QVA+ A IP S +++SETST+ VPN
Sbjct: 1023 HVYTDGSVLLTHGGTEMGQGLHTKMVQVASRALKIPTSKIYISETSTNTVPNTSPTAASV 1082
Query: 1120 XXDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFD 1179
D+ G AV AC+ I R+EP K+ S+ + +A Y+ + LSA GFY TP + +
Sbjct: 1083 SADLNGQAVYAACQTILKRLEPYKKKNPSGSWEDWVTAAYMDTVSLSATGFYRTPNLGYS 1142
Query: 1180 WITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQ 1239
+ T GNPF YF+YG A +EVEID LTGD ++++D+G SLNPAID+GQ+EGAF+Q
Sbjct: 1143 FETNSGNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQ 1202
Query: 1240 GLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIH 1299
GLG LEEL + P G L+T GP +YKIP+ +P++F VSLL+ PN KAI+
Sbjct: 1203 GLGLFTLEELHYS-------PEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKKAIY 1255
Query: 1300 SSKAVGEPPFFLASSVFFAIKDAISAARADAGHTG-----WFPLDNPATPERIRMACLDE 1354
+SKAVGEPP FLA+S+FFAIKDAI AARA HTG F LD+PATPE+IR AC+D+
Sbjct: 1256 ASKAVGEPPLFLAASIFFAIKDAIRAARAQ--HTGNNVKELFRLDSPATPEKIRNACVDK 1313
Query: 1355 FT 1356
FT
Sbjct: 1314 FT 1315
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8GUQ8 | XDH1_ARATH | 1, ., 1, 7, ., 1, ., 4 | 0.7766 | 0.9934 | 1.0 | yes | no |
| F4JLI5 | XDH2_ARATH | 1, ., 1, 7, ., 1, ., 4 | 0.7705 | 0.9824 | 0.9948 | no | no |
| Q12553 | XDH_EMENI | 1, ., 1, 7, ., 1, ., 4 | 0.4375 | 0.9518 | 0.9567 | yes | no |
| P22811 | XDH_DROPS | 1, ., 1, 7, ., 1, ., 4 | 0.4499 | 0.9547 | 0.9739 | yes | no |
| Q54FB7 | XDH_DICDI | 1, ., 1, 7, ., 1, ., 4 | 0.4737 | 0.9510 | 0.9594 | yes | no |
| Q6AUV1 | XDH_ORYSJ | 1, ., 1, 7, ., 1, ., 4 | 0.7114 | 0.9861 | 0.9868 | yes | no |
| Q00519 | XDH_MOUSE | 1, ., 1, 7, ., 3, ., 2 | 0.4752 | 0.9430 | 0.9677 | yes | no |
| P80457 | XDH_BOVIN | 1, ., 1, 7, ., 3, ., 2 | 0.4749 | 0.9423 | 0.9692 | yes | no |
| P10351 | XDH_DROME | 1, ., 1, 7, ., 1, ., 4 | 0.4586 | 0.9430 | 0.9677 | yes | no |
| P47989 | XDH_HUMAN | 1, ., 1, 7, ., 3, ., 2 | 0.4840 | 0.9437 | 0.9699 | yes | no |
| P22985 | XDH_RAT | 1, ., 1, 7, ., 3, ., 2 | 0.4785 | 0.9459 | 0.9737 | yes | no |
| P47990 | XDH_CHICK | 1, ., 1, 7, ., 3, ., 2 | 0.4878 | 0.9591 | 0.9675 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| XDH1 | xanthine dehydrogenase (EC-1.17.1.4) (1368 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| estExt_fgenesh4_pg.C_LG_X2235 | RecName- Full=Uricase; EC=1.7.3.3;; Catalyzes the oxidation of uric acid to 5- hydroxyisourate, [...] (308 aa) | • | • | 0.929 | |||||||
| estExt_fgenesh4_pg.C_LG_V1144 | SubName- Full=Putative uncharacterized protein; (188 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pm.C_LG_I0927 | sulfite oxidase (SOX) (EC-1.8.3.1) (393 aa) | • | 0.683 | ||||||||
| DHQD3 | dehydroquinate dehydratase/ shikimate dehydrogenase (EC-1.1.1.25 4.2.1.10) (518 aa) | • | 0.683 | ||||||||
| DHQD5 | dehydroquinate dehydratase/ shikimate dehydrogenase (EC-1.1.1.25 4.2.1.10) (504 aa) | • | 0.683 | ||||||||
| DHQD1 | dehydroquinate dehydratase/ shikimate dehydrogenase (EC-1.1.1.25 4.2.1.10) (518 aa) | • | 0.683 | ||||||||
| gw1.XVII.653.1 | hypothetical protein (417 aa) | • | 0.651 | ||||||||
| fgenesh4_pg.C_scaffold_88000094 | hypothetical protein (477 aa) | • | 0.651 | ||||||||
| estExt_fgenesh4_pg.C_LG_I2295 | hypothetical protein (481 aa) | • | 0.651 | ||||||||
| estExt_Genewise1_v1.C_1400168 | hypothetical protein (483 aa) | • | 0.651 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1370 | |||
| PLN02906 | 1319 | PLN02906, PLN02906, xanthine dehydrogenase | 0.0 | |
| TIGR02969 | 1330 | TIGR02969, mam_aldehyde_ox, aldehyde oxidase | 0.0 | |
| TIGR02965 | 758 | TIGR02965, xanthine_xdhB, xanthine dehydrogenase, | 0.0 | |
| COG4631 | 781 | COG4631, XdhB, Xanthine dehydrogenase, molybdopter | 0.0 | |
| PLN00192 | 1344 | PLN00192, PLN00192, aldehyde oxidase | 0.0 | |
| pfam02738 | 543 | pfam02738, Ald_Xan_dh_C2, Molybdopterin-binding do | 0.0 | |
| TIGR02963 | 467 | TIGR02963, xanthine_xdhA, xanthine dehydrogenase, | 1e-126 | |
| COG1529 | 731 | COG1529, CoxL, Aerobic-type carbon monoxide dehydr | 2e-98 | |
| COG4630 | 493 | COG4630, XdhA, Xanthine dehydrogenase, iron-sulfur | 1e-97 | |
| PRK09970 | 759 | PRK09970, PRK09970, xanthine dehydrogenase subunit | 4e-75 | |
| TIGR03196 | 768 | TIGR03196, pucD, xanthine dehydrogenase D subunit | 6e-75 | |
| TIGR03311 | 848 | TIGR03311, Se_dep_Molyb_1, selenium-dependent moly | 2e-64 | |
| pfam00941 | 171 | pfam00941, FAD_binding_5, FAD binding domain in mo | 2e-63 | |
| TIGR03194 | 746 | TIGR03194, 4hydrxCoA_A, 4-hydroxybenzoyl-CoA reduc | 2e-56 | |
| PRK09800 | 956 | PRK09800, PRK09800, putative hypoxanthine oxidase; | 2e-48 | |
| COG2080 | 156 | COG2080, CoxS, Aerobic-type carbon monoxide dehydr | 2e-48 | |
| TIGR03313 | 951 | TIGR03313, Se_sel_red_Mo, probable selenate reduct | 2e-47 | |
| smart01008 | 107 | smart01008, Ald_Xan_dh_C, Aldehyde oxidase and xan | 4e-41 | |
| TIGR02416 | 770 | TIGR02416, CO_dehy_Mo_lg, carbon-monoxide dehydrog | 6e-40 | |
| pfam01315 | 111 | pfam01315, Ald_Xan_dh_C, Aldehyde oxidase and xant | 5e-38 | |
| pfam01799 | 75 | pfam01799, Fer2_2, [2Fe-2S] binding domain | 2e-35 | |
| TIGR03198 | 151 | TIGR03198, pucE, xanthine dehydrogenase E subunit | 1e-34 | |
| TIGR03193 | 148 | TIGR03193, 4hydroxCoAred, 4-hydroxybenzoyl-CoA red | 1e-33 | |
| PRK09908 | 159 | PRK09908, PRK09908, xanthine dehydrogenase subunit | 2e-30 | |
| pfam03450 | 103 | pfam03450, CO_deh_flav_C, CO dehydrogenase flavopr | 2e-30 | |
| PRK09971 | 291 | PRK09971, PRK09971, xanthine dehydrogenase subunit | 3e-30 | |
| COG1319 | 284 | COG1319, CoxM, Aerobic-type carbon monoxide dehydr | 1e-29 | |
| TIGR03311 | 848 | TIGR03311, Se_dep_Molyb_1, selenium-dependent moly | 3e-28 | |
| PRK11433 | 217 | PRK11433, PRK11433, aldehyde oxidoreductase 2Fe-2S | 4e-26 | |
| smart01092 | 102 | smart01092, CO_deh_flav_C, CO dehydrogenase flavop | 5e-19 | |
| TIGR03199 | 264 | TIGR03199, pucC, xanthine dehydrogenase C subunit | 1e-07 | |
| TIGR03195 | 321 | TIGR03195, 4hydrxCoA_B, 4-hydroxybenzoyl-CoA reduc | 4e-07 | |
| cd00207 | 84 | cd00207, fer2, 2Fe-2S iron-sulfur cluster binding | 4e-07 | |
| pfam00111 | 77 | pfam00111, Fer2, 2Fe-2S iron-sulfur cluster bindin | 4e-06 | |
| PRK09800 | 956 | PRK09800, PRK09800, putative hypoxanthine oxidase; | 0.004 |
| >gnl|CDD|215491 PLN02906, PLN02906, xanthine dehydrogenase | Back alignment and domain information |
|---|
Score = 2711 bits (7028), Expect = 0.0
Identities = 1075/1324 (81%), Positives = 1188/1324 (89%), Gaps = 5/1324 (0%)
Query: 38 HLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97
H TLLEYLRD+GLTGTKLGCGEGGCGACTVMVS YD+K+ KCVH AVNACLAPLYS+EGM
Sbjct: 1 HQTLLEYLRDLGLTGTKLGCGEGGCGACTVMVSHYDRKTGKCVHYAVNACLAPLYSVEGM 60
Query: 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEES 157
HVITVEG+GNR+ GLHP+QE+L HGSQCGFCTPGFIMSMY+LLRSS+TPPTEEQIEE
Sbjct: 61 HVITVEGIGNRRDGLHPVQEALASMHGSQCGFCTPGFIMSMYALLRSSKTPPTEEQIEEC 120
Query: 158 LAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSN 217
LAGNLCRCTGYRPI+DAFRVFAKT+DALYT +SS+SL++GE +CPSTGKPCSCG K S
Sbjct: 121 LAGNLCRCTGYRPILDAFRVFAKTDDALYTGVSSLSLQDGEPICPSTGKPCSCGSKTTSA 180
Query: 218 ADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLRKSNPLNLSGFGGLKWYRPL 277
A TC ++P+SYSEIDGS YTEKELIFPPELLLRK PL L G GGL WYRP
Sbjct: 181 AGTC-----KSDRFQPISYSEIDGSWYTEKELIFPPELLLRKLTPLKLLGNGGLTWYRPT 235
Query: 278 KLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 337
LQHLLELK++YPD+KL+VGNTEVGIEMR K QY VLIS THVPELN + VKDDGLEIG
Sbjct: 236 SLQHLLELKAEYPDAKLVVGNTEVGIEMRFKNAQYPVLISPTHVPELNAIKVKDDGLEIG 295
Query: 338 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISD 397
AAVRL+EL +FRKVV ERPAHETS+CKAFIEQ+KWFAGTQI+NVAS+GGNICTASPISD
Sbjct: 296 AAVRLSELQNLFRKVVKERPAHETSACKAFIEQLKWFAGTQIRNVASIGGNICTASPISD 355
Query: 398 LNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKE 457
LNPLWMA+GA F I+ C G+IR+ A +FFLGYRKVDL EILLS+FLPWTRPFE+VKE
Sbjct: 356 LNPLWMAAGATFVIISCDGDIRSVPASDFFLGYRKVDLKPDEILLSVFLPWTRPFEYVKE 415
Query: 458 FKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSW 517
FKQAHRRDDDIA+VNAGMRV LEEKD EW+VSDA + YGGVAPLS+SA+KT+ F++GK W
Sbjct: 416 FKQAHRRDDDIAIVNAGMRVKLEEKDGEWIVSDASIAYGGVAPLSVSARKTEEFLIGKPW 475
Query: 518 SQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVP 577
++E LQ+ALK+LQ DI++KEDAPGGMV+FRKSL LSFFFKFFLWVSHQ+E S E+ P
Sbjct: 476 NKETLQDALKVLQKDILIKEDAPGGMVEFRKSLALSFFFKFFLWVSHQLEADGSTIETFP 535
Query: 578 STHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCL 637
+HLSA Q F RPS +G QDYE K GT+VG PEVHLS+ LQVTGEAEY DD PMPPN L
Sbjct: 536 ESHLSAAQPFPRPSSVGMQDYETVKQGTAVGQPEVHLSAELQVTGEAEYADDIPMPPNTL 595
Query: 638 HAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTC 697
HAALVLS +PHARILSIDDS A+SSPGF GIF A+DV GDN IGPVV DEELFA++VVTC
Sbjct: 596 HAALVLSTKPHARILSIDDSEAKSSPGFAGIFLAKDVPGDNMIGPVVHDEELFATDVVTC 655
Query: 698 VGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDI 757
VGQVIGVVVA+T E AK A+RKV+VEYEELPAILSI+EAI+A SFHPNTER KGDV++
Sbjct: 656 VGQVIGVVVADTQENAKAAARKVKVEYEELPAILSIEEAIEAGSFHPNTERRLEKGDVEL 715
Query: 758 CFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHV 817
CF SGQCD+IIEGEV++GGQEHFYLEP+SS+VWT D GNEVHMISSTQAPQKHQKYV+HV
Sbjct: 716 CFASGQCDRIIEGEVQMGGQEHFYLEPNSSLVWTSDSGNEVHMISSTQAPQKHQKYVAHV 775
Query: 818 LGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQR 877
LGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVP++LLNRPV LTLDRD+DMMI+GQR
Sbjct: 776 LGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPAYLLNRPVKLTLDRDVDMMITGQR 835
Query: 878 HSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGN 937
H+FLGKYKVGFTNEGK+LALDLEIYNN GNSLDLS AVLERAMFHSDNVYEIPNVRI+GN
Sbjct: 836 HAFLGKYKVGFTNEGKILALDLEIYNNGGNSLDLSGAVLERAMFHSDNVYEIPNVRIVGN 895
Query: 938 VCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQL 997
VCFTNFPSNTAFRGFGGPQGMLITENWIQR+AVE+ KSPEEIRE+NFQGEGS+ HYGQ L
Sbjct: 896 VCFTNFPSNTAFRGFGGPQGMLITENWIQRIAVELNKSPEEIREMNFQGEGSVTHYGQVL 955
Query: 998 QHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGA 1057
QHCTL LW+ELK+SCDFL R+EVD FN NRWKKRG+AMVPTKFGISFT K MNQAGA
Sbjct: 956 QHCTLPQLWDELKVSCDFLKRREEVDEFNAKNRWKKRGVAMVPTKFGISFTTKFMNQAGA 1015
Query: 1058 LVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAA 1117
LVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVF+SETSTDKVPNASPTAA
Sbjct: 1016 LVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFISETSTDKVPNASPTAA 1075
Query: 1118 SASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEID 1177
SASSD+YGAAVLDACEQIKARMEP+ASK NF+SFAEL +ACY QRIDLSAHGFYITP+I
Sbjct: 1076 SASSDMYGAAVLDACEQIKARMEPVASKLNFSSFAELVTACYFQRIDLSAHGFYITPDIG 1135
Query: 1178 FDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAF 1237
FDW TGKGNPF YFTYGAAFAEVEIDTLTGDFHTR ++++DLGYS+NPAID+GQIEGAF
Sbjct: 1136 FDWKTGKGNPFNYFTYGAAFAEVEIDTLTGDFHTRRVDIVMDLGYSINPAIDIGQIEGAF 1195
Query: 1238 IQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKA 1297
+QGLGW+ALEELKWGDAAHKWI PG L+TCGPG+YKIPS+ND+P KFNVSLLKG PN KA
Sbjct: 1196 VQGLGWVALEELKWGDAAHKWIRPGSLFTCGPGTYKIPSVNDIPFKFNVSLLKGAPNPKA 1255
Query: 1298 IHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDEFTA 1357
IHSSKAVGEPPFFLA+SVFFAIKDAI AARA+ G GWFPLD PATPERIRMAC DE TA
Sbjct: 1256 IHSSKAVGEPPFFLAASVFFAIKDAIKAARAEVGLHGWFPLDTPATPERIRMACGDEITA 1315
Query: 1358 PFIN 1361
PF +
Sbjct: 1316 PFAS 1319
|
Length = 1319 |
| >gnl|CDD|132014 TIGR02969, mam_aldehyde_ox, aldehyde oxidase | Back alignment and domain information |
|---|
Score = 1109 bits (2870), Expect = 0.0
Identities = 561/1348 (41%), Positives = 817/1348 (60%), Gaps = 48/1348 (3%)
Query: 20 EAILYVNGLRKVLPDGL-AHLTLLEYLR-DIGLTGTKLGCGEGGCGACTVMVSRYDKKSK 77
E + YVNG RKV+ + LL YLR + LTGTK GCG GGCGACTVM+SRY+ +K
Sbjct: 2 ELLFYVNG-RKVVEKNVDPETMLLPYLRKKLRLTGTKYGCGGGGCGACTVMISRYNPSTK 60
Query: 78 KCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMS 137
H VNACL P+ SL G V TVEG+G+ + LHP+QE + + HG+QCGFCTPG +MS
Sbjct: 61 SIRHHPVNACLTPICSLYGAAVTTVEGIGSTRTRLHPVQERIAKCHGTQCGFCTPGMVMS 120
Query: 138 MYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEG 197
MY+LLR+ PT +Q+ ++L GNLCRCTGYRPI+DA + F KT+ + KE
Sbjct: 121 MYALLRN-HPEPTLDQLTDALGGNLCRCTGYRPIIDACKTFCKTSGCCQS-------KEN 172
Query: 198 EFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELL- 256
C G G+ D + + + P+ ++ ELIFPPEL+
Sbjct: 173 GVCCLDQGIN---GLPEFEEGDETSPELFSEEEFLPLDPTQ---------ELIFPPELMR 220
Query: 257 LRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQV 314
+ + P F + W P+ L+ LLE K KYP + +++GNT VG E++ K + + V
Sbjct: 221 MAEKQPQRTRVFYSERMMWISPVTLKELLEAKFKYPQAPVVMGNTSVGPEVKFKGVFHPV 280
Query: 315 LISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWF 374
+IS + EL+V+N DGL +GA + L ++ + VV + P T + +A ++ +
Sbjct: 281 IISPDRIEELSVVNHTGDGLTLGAGLSLAQVKDILADVVQKLPEETTQTYRALLKHLGTL 340
Query: 375 AGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVD 434
AG+QI+N+AS+GG+I + SDLNPL +++ +G + ++E+F D
Sbjct: 341 AGSQIRNMASLGGHIISRHLDSDLNPLLAVGNCTLNLLSKEGKRQIPLSEQFLSKCPDAD 400
Query: 435 LTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLV 494
L EIL+S+ +P++R +EFV F+QA R+ + +A+VN+GMRV+ E D ++ + +
Sbjct: 401 LKPQEILVSVNIPYSRKWEFVSAFRQAQRQQNALAIVNSGMRVFFGEGDG--IIRELSIS 458
Query: 495 YGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSF 554
YGGV P ++ AK + ++G+ W++E+L A +++ ++ L APGG V+F+++L +SF
Sbjct: 459 YGGVGPTTICAKNSCQKLIGRPWNEEMLDTACRLILDEVSLAGSAPGGKVEFKRTLIISF 518
Query: 555 FFKFFLWVSHQMEGKNSI-KESVPSTHLSAMQSFHRP---SIIGNQDYEITKHGTS-VGS 609
FKF+L VS ++ + S+ + SA++ H S + +Q+ + + +G
Sbjct: 519 LFKFYLEVSQILKRMDPGHYPSLADKYESALEDLHSKHHWSTLKHQNVDSMQLPQDPIGH 578
Query: 610 PEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIF 669
P +HLS TGEA Y DD P L V S R HA+I+SID S A S PG V I
Sbjct: 579 PIMHLSGVKHATGEAIYCDDMPAVDQELFLTFVTSSRAHAKIVSIDLSEALSLPGVVDII 638
Query: 670 FAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEEL-P 728
AE +Q N G E+L A++ V CVGQ++ V+A++ +AK A++ V++ Y +L P
Sbjct: 639 TAEHLQDANTFGT----EKLLATDKVHCVGQLVCAVIADSEVQAKQAAKHVKIVYRDLEP 694
Query: 729 AILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSV 788
IL+I+EAI KSF ER G+VD F+ D+I+EGE+ +GGQEHFY+E S +
Sbjct: 695 LILTIEEAIQHKSFF-EPERKLEYGNVDEAFKV--VDQILEGEIHMGGQEHFYMETQSML 751
Query: 789 VWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAA 848
V E+ + STQ P+ Q V+ L LP++KV+C +R+GG FGGK +++ +AA
Sbjct: 752 VVPKGEDQEMDVYVSTQFPKYIQDIVAATLKLPVNKVMCHVRRVGGAFGGKVGKTSIMAA 811
Query: 849 AAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNS 908
A + R V TL+R DM+I+G RH +LGKYK GF N+G+++ALD+E Y+N G+S
Sbjct: 812 ITAFAANKHGRAVRCTLERGEDMLITGGRHPYLGKYKAGFMNDGRIVALDVEHYSNGGSS 871
Query: 909 LDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRV 968
LD SL V+E + DN Y+ PN+R G C TN PSNTAFRGFG PQ LITE I V
Sbjct: 872 LDESLWVIEMGLLKMDNAYKFPNLRCRGWACRTNLPSNTAFRGFGFPQAGLITEACITEV 931
Query: 969 AVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLN 1028
A + SPE++R IN E Y Q++ LF W E + + V+ FN
Sbjct: 932 AAKCGLSPEKVRTINMYKEIDQTPYKQEINAKNLFQCWRECMAKSSYSERKVAVEKFNAE 991
Query: 1029 NRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVA 1088
N WKKRG+A++P KF + M QA ALVH+Y DG+VLVTHGG+EMGQG+HTK+ QV
Sbjct: 992 NYWKKRGLAVIPLKFPVGLGSVAMGQAAALVHIYLDGSVLVTHGGIEMGQGVHTKMIQVV 1051
Query: 1089 ASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNF 1148
+ +P+S+V + TST+ VPN + + S +D+ G AV DAC+ + R+EPI SK+
Sbjct: 1052 SRELKMPMSNVHLRGTSTETVPNTNASGGSVVADLNGLAVKDACQTLLKRLEPIISKNPQ 1111
Query: 1149 NSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGD 1208
++ + A + Q I LSA G++ E + +W G+G+PF YF YGAA +EVEID LTGD
Sbjct: 1112 GTWKDWAQTAFDQSISLSAVGYFRGYESNINWEKGEGHPFEYFVYGAACSEVEIDCLTGD 1171
Query: 1209 FHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCG 1268
++++D+G+S+NPA+D+GQ+EGAFIQG+G +EEL + P G LY+ G
Sbjct: 1172 HKNIRTDIVMDVGHSINPALDIGQVEGAFIQGMGLYTIEELSYS-------PQGILYSRG 1224
Query: 1269 PGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARA 1328
P YKIP++ D+P + ++S L + ++SSK +GE FL SVFFAI DA+ AAR
Sbjct: 1225 PNQYKIPAICDIPTELHISFLPPSEHSNTLYSSKGLGESGVFLGCSVFFAIHDAVRAARQ 1284
Query: 1329 DAGHTGWFPLDNPATPERIRMACLDEFT 1356
+ G +G + L +P TPE+IRMAC D+FT
Sbjct: 1285 ERGLSGPWKLTSPLTPEKIRMACEDKFT 1312
|
Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase. Length = 1330 |
| >gnl|CDD|200222 TIGR02965, xanthine_xdhB, xanthine dehydrogenase, molybdopterin binding subunit | Back alignment and domain information |
|---|
Score = 850 bits (2198), Expect = 0.0
Identities = 346/767 (45%), Positives = 459/767 (59%), Gaps = 35/767 (4%)
Query: 607 VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFV 666
VG+ H S+ V G A Y DD P P LHAAL LS R HARI S+D S R++PG V
Sbjct: 1 VGTSLKHESAHKHVAGTAVYIDDIPEPAGTLHAALGLSTRAHARITSMDLSAVRAAPGVV 60
Query: 667 GIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEE 726
+ A D+ G+N I P++ D+ L A V VGQ I VVA + + A+ A+R ++EYEE
Sbjct: 61 DVLTAADIPGENDISPIIHDDPLLADGKVEFVGQPIFAVVATSRDAARRAARLAKIEYEE 120
Query: 727 LPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHS 786
LPA+L I+EA+ A S +GD + + G +R+GGQEHFYLE
Sbjct: 121 LPAVLDIEEALAAGSRLVTPPLTLERGDAAAALAAA--PHRLSGTMRIGGQEHFYLEGQI 178
Query: 787 SVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFI 846
++ +H+ SSTQ P + Q V+HVLG+P V + +R+GGGFGGKET++
Sbjct: 179 ALA-VPGEDGGMHVWSSTQHPSEVQHLVAHVLGVPSHAVTVEVRRMGGGFGGKETQANLF 237
Query: 847 AAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAG 906
A AAV + RPV L DRD DMMI+G+RH F Y VGF +EG++L +D+++ G
Sbjct: 238 ACLAAVAARKTGRPVKLRPDRDDDMMITGKRHDFRVDYDVGFDDEGRILGVDIDMAARCG 297
Query: 907 NSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQ 966
S DLS V +RA+FH+DN Y +P+V I + TN SNTAFRGFGGPQGM+ E +
Sbjct: 298 FSADLSGPVTDRALFHADNAYFLPDVTITSHPLKTNTQSNTAFRGFGGPQGMVAIERIMD 357
Query: 967 RVAVEVRKSPEEIREINFQGEG--SILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDN 1024
VA + K P E+R+ NF G+ ++ Y Q ++ + + EL+ S D+ R +
Sbjct: 358 EVARALGKDPLEVRKRNFYGKDERNVTPYHQTVEDNIIHEIIEELEASSDYAARRAAIRA 417
Query: 1025 FNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKV 1084
FN + K+GIA+ P KFGISFT+ +NQAGALVHVYTDG++ + HGG EMGQGL+TKV
Sbjct: 418 FNATSPVLKKGIALTPVKFGISFTVTHLNQAGALVHVYTDGSIHLNHGGTEMGQGLNTKV 477
Query: 1085 AQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIAS 1144
AQV A F + + V ++ T T KVPN S TAAS+ SD+ G A DA QIK R+ A+
Sbjct: 478 AQVVAEEFQVDIDRVKITATDTGKVPNTSATAASSGSDLNGMAAQDAARQIKERLVEFAA 537
Query: 1145 KH--------NFN-----------SFAELASACYVQRIDLSAHGFYITPEIDFDWITGKG 1185
+ F FAEL Y R+ LS+ GFY TP+I +D G+G
Sbjct: 538 EKWQVPEEDVRFAPNHVRVGEQRVPFAELVQQAYFARVQLSSTGFYKTPKIHWDRAKGRG 597
Query: 1186 NPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLA 1245
PF YF YGAA +EV +DTLTG++ A+++ D+G SLNPAID+GQIEG F+QG+GWL
Sbjct: 598 RPFYYFAYGAACSEVSVDTLTGEYKVLRADILHDVGRSLNPAIDIGQIEGGFVQGMGWLT 657
Query: 1246 LEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKA-IHSSKAV 1304
EEL W + G L T P +YKIP+ +D P FNV L + N + IH SKAV
Sbjct: 658 TEELVWDEK-------GRLRTHAPSTYKIPAASDRPKDFNVRLFEWGENREDTIHRSKAV 710
Query: 1305 GEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMAC 1351
GEPP L SV FAI DA+++ A + LD PATPER+ MA
Sbjct: 711 GEPPLMLGISVLFAISDAVASV---ADYRVCPRLDAPATPERVLMAV 754
|
Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase [Purines, pyrimidines, nucleosides, and nucleotides, Other]. Length = 758 |
| >gnl|CDD|226978 COG4631, XdhB, Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Score = 835 bits (2159), Expect = 0.0
Identities = 343/770 (44%), Positives = 454/770 (58%), Gaps = 36/770 (4%)
Query: 604 GTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSP 663
VG+ H S+ VTG A Y DD P P LH AL LS R HARI +D S R++P
Sbjct: 16 RGGVGTSLRHESAHKHVTGTAVYIDDIPEPAGTLHGALGLSERAHARITRMDLSAVRAAP 75
Query: 664 GFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVE 723
G V + A DV G+N I PV D+ L A V GQ + V+AE+ E A+ A+R ++E
Sbjct: 76 GVVDVLTAADVPGENDISPVKHDDPLLADGKVEFHGQPVFAVIAESREAARRAARLAKIE 135
Query: 724 YEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLE 783
YE+LP + I EAI A ++GD ++GE+R+GGQEHFYLE
Sbjct: 136 YEDLPPVTDIDEAIAAGRLVTPPLT-LKRGDAAAALA--AAPHRLQGEMRIGGQEHFYLE 192
Query: 784 PHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRS 843
++ +V + SSTQ P + Q V+HVLG+P + V + +R+GGGFGGKET++
Sbjct: 193 GQIALA-VPGEDGDVTVWSSTQHPTEVQHLVAHVLGVPSNAVTVEVRRMGGGFGGKETQA 251
Query: 844 AFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYN 903
AA AA+ + RPV + DRD DM +G+RH F Y+VGF +EG++L +D +
Sbjct: 252 NQFAALAALAAKKTGRPVKIRPDRDEDMTATGKRHDFHVDYEVGFDDEGRILGVDATLAA 311
Query: 904 NAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITEN 963
G S DLS V +RA+FH+DN Y P+V I+ TN SNTAFRGFGGPQGML E
Sbjct: 312 RCGFSADLSGPVTDRALFHADNAYFYPHVHILSRPLKTNTVSNTAFRGFGGPQGMLGIER 371
Query: 964 WIQRVAVEVRKSPEEIREINFQGEG--SILHYGQQLQHCTLFPLWNELKLSCDFLNARKE 1021
I VA + K P EIR++NF G+ ++ Y Q ++ + + +EL+ S D+ R+
Sbjct: 372 IIDEVAYALGKDPLEIRKLNFYGKDGRNVTPYHQTVEDNIIARIVDELEASSDYAARREA 431
Query: 1022 VDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLH 1081
+ FN + KRG+A+ P KFGISFT NQAGALVHVYTDG++ + HGG EMGQGL+
Sbjct: 432 IRAFNAASPVIKRGLALTPVKFGISFTATHYNQAGALVHVYTDGSIHLNHGGTEMGQGLY 491
Query: 1082 TKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEP 1141
TKVAQV A F + + V ++ T+TDKVPN S TAAS+ SD+ G A DA QIK R+
Sbjct: 492 TKVAQVVAEEFQVDIDRVKITATTTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVA 551
Query: 1142 IASKH--------NFN-----------SFAELASACYVQRIDLSAHGFYITPEIDFDWIT 1182
A++H F +FA+L Y R+ LSA GFY TP+I +D
Sbjct: 552 FAAEHWGVPEEDVAFLPNRVRIGGQELAFADLVKQAYFARVQLSAAGFYKTPKIHWDRAA 611
Query: 1183 GKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLG 1242
G+G PF YF YGAA +EV +DTLTG++ +++ D+G SLNPAID+GQIEG F+QG+G
Sbjct: 612 GRGRPFYYFAYGAACSEVSVDTLTGEYKVERTDILHDVGRSLNPAIDLGQIEGGFVQGMG 671
Query: 1243 WLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKA-IHSS 1301
WL EEL W G L T P +YKIP +D P FNV L + N + IH S
Sbjct: 672 WLTTEELWWD-------EKGRLRTHAPSTYKIPLASDRPKIFNVRLAEWSENAEPTIHRS 724
Query: 1302 KAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMAC 1351
KAVGEPP L SV A+ DA+++ A + LD PATPER+ MA
Sbjct: 725 KAVGEPPLMLGISVLEALSDAVASV---ADYRVCPRLDAPATPERVLMAV 771
|
Length = 781 |
| >gnl|CDD|215096 PLN00192, PLN00192, aldehyde oxidase | Back alignment and domain information |
|---|
Score = 714 bits (1845), Expect = 0.0
Identities = 444/1403 (31%), Positives = 672/1403 (47%), Gaps = 175/1403 (12%)
Query: 25 VNGLRKVLPDGLAHLTLLEYLR-DIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCA 83
VNG R L TLLE+LR KLGCGEGGCGAC V++S+YD +
Sbjct: 10 VNGERFELSSVDPSTTLLEFLRTQTPFKSVKLGCGEGGCGACVVLLSKYDPVLDQVEDFT 69
Query: 84 VNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLL- 142
V++CL L S+ G + T EG+GN K G HPI + H SQCGFCTPG +S++S L
Sbjct: 70 VSSCLTLLCSVNGCSITTSEGLGNSKDGFHPIHKRFAGFHASQCGFCTPGMCISLFSALV 129
Query: 143 ---RSSQTPP-------TEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSM 192
++ + P T + E++++GNLCRCTGYRPIVDA + FA D + +
Sbjct: 130 NADKTDRPEPPSGFSKLTVVEAEKAVSGNLCRCTGYRPIVDACKSFAADVD-----IEDL 184
Query: 193 SLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFP 252
L + K + + + Y +
Sbjct: 185 GL--------------NSFWKKGESEEAKLSKLPP---YNH------------SDHICTF 215
Query: 253 PELL---LRKSNPLNLSGFGGLKWYRPLKLQHLLEL-KSKYPDS---KLLVGNTEVGIEM 305
PE L ++ S L+ S + WY P+ ++ L L +S D KL+VGNT G
Sbjct: 216 PEFLKKEIKSSLLLDSSRYR---WYTPVSVEELQSLLESNNFDGVSVKLVVGNTGTGYYK 272
Query: 306 RLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCK 365
+ Y I + H+PEL+++ + G+EIGA V +++ ++ R+ E+ S
Sbjct: 273 DEEL--YDKYIDIRHIPELSMIRRDEKGIEIGAVVTISKAIEALRE--------ESKSEY 322
Query: 366 AF------IEQIKWFAGTQIKNVASVGGNICTAS----PISDLNPLWMASGAKFHIVDCK 415
F +E+I A ++N S+GGN+ A P SD+ + +A+G+ +I +
Sbjct: 323 VFKKIADHMEKI---ASRFVRNTGSIGGNLVMAQRKQFP-SDIATILLAAGSTVNIQNAS 378
Query: 416 GNIRTTMAEEFFLGYRKVDLTSGEILLSIFLP-WTRPFE-----FVKEFKQAHR-RDDDI 468
+ T+ EEF + L S +LLS+ +P WT + ++ A R + +
Sbjct: 379 KREKLTL-EEFL---ERPPLDSKSLLLSVEIPSWTSSSGSDTKLLFETYRAAPRPLGNAL 434
Query: 469 ALVNAGM--RVYLEEKDEEWVVSDALLVYGGV-APLSLSAKKTKTFIVGKSWSQELLQNA 525
+NA V + VV+D L +G ++ A+K + F+ GK S +L A
Sbjct: 435 PYLNAAFLAEVSQDASSGGIVVNDCRLAFGAYGTKHAIRARKVEEFLTGKVLSDSVLYEA 494
Query: 526 LKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSI----------KES 575
+++L+ ++ ++ ++R SL + F F F S +E +
Sbjct: 495 VRLLKGIVVPEDGTSHP--EYRSSLAVGFLFDFL---SPLIESNAKSSNGWLDGGSNTKQ 549
Query: 576 VPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPN 635
P H + Q E VG P + + LQ +GEA Y DD P P N
Sbjct: 550 NPDQHDDV--KKPTLLLSSKQQVEENNEYHPVGEPIKKVGAALQASGEAVYVDDIPSPKN 607
Query: 636 CLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDV--QGDNRIGP--VVADEELFA 691
CL+ A + S +P AR+ I G + + +D+ G N IG + E LFA
Sbjct: 608 CLYGAFIYSTKPLARVKGIKFKSNLVPQGVLAVITFKDIPKGGQN-IGSKTIFGPEPLFA 666
Query: 692 SEVVTCVGQVIGVVVAETHEEAKLASRKVQVEY--EEL-PAILSIQEAIDAKSFH--PNT 746
EV C GQ I +VVA+T + A +A+ VEY E L P IL++++A+ S P
Sbjct: 667 DEVTRCAGQRIALVVADTQKHADMAANLAVVEYDTENLEPPILTVEDAVKRSSLFEVPPF 726
Query: 747 ERCFRKGDVDICFQSGQCD---KIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISS 803
GD G + KI+ E+++G Q +FY+E +++ D N + + SS
Sbjct: 727 LYPKPVGD----ISKGMAEADHKILSAEIKLGSQYYFYMETQTALALP-DEDNCIVVYSS 781
Query: 804 TQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNL 863
TQ P+ ++ LG+P V T+R+GGGFGGK +S +A A A+ +F L RPV +
Sbjct: 782 TQCPEYVHSVIARCLGIPEHNVRVITRRVGGGFGGKAVKSMPVATACALAAFKLQRPVRM 841
Query: 864 TLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHS 923
L+R DM+++G RH Y VGF ++GK+ AL L+I NAG S D+S ++ R + +
Sbjct: 842 YLNRKTDMIMAGGRHPMKITYSVGFKSDGKITALHLDILINAGISPDISP-IMPRNIIGA 900
Query: 924 DNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREIN 983
Y+ + VC TN S +A R G QG I E I+ VA + + +R+IN
Sbjct: 901 LKKYDWGALSFDIKVCKTNLSSRSAMRAPGEVQGSYIAEAIIEHVASTLSMDVDSVRKIN 960
Query: 984 FQGEGSI-LHYGQQLQHC---TLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMV 1039
S+ L YG TL +W++L S +F + V FN +N+WKKRGI+ V
Sbjct: 961 LHTYESLKLFYGDSAGEPSEYTLPSIWDKLASSSEFKQRTEMVKEFNRSNKWKKRGISRV 1020
Query: 1040 PTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIP---- 1095
P + ++ V + +DG++ V GG+E+GQGL TKV Q+AA +
Sbjct: 1021 PIVHEV-----MLRPTPGKVSILSDGSIAVEVGGIEIGQGLWTKVKQMAAFGLGMIKCDG 1075
Query: 1096 ----LSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFN-- 1149
L + V ++ T + TA S +S+ AV C + R++PI +
Sbjct: 1076 GEDLLDKIRVIQSDTLSMIQGGFTAGSTTSESSCEAVRLCCVILVERLKPIKERLQEQMG 1135
Query: 1150 --SFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTG 1207
++ L S Y+Q ++LSA +Y TP+ Y YGAA +EVE+D LTG
Sbjct: 1136 SVTWDMLISQAYMQSVNLSASSYY-TPDPSS---------MEYLNYGAAVSEVEVDLLTG 1185
Query: 1208 DFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTC 1267
+ +++I D G SLNPA+D+GQIEGAF+QG+G+ LEE G + T
Sbjct: 1186 ETTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTN-------SDGLVVTD 1238
Query: 1268 GPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAAR 1327
G +YKIP+++ +P +FNV +L + K + SSKA GEPP LA+SV A + AI AR
Sbjct: 1239 GTWTYKIPTVDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAASVHCATRAAIREAR 1298
Query: 1328 AD-------AGHTGWFPLDNPAT 1343
G F L PAT
Sbjct: 1299 KQLLSWGGIDGSDSTFQLPVPAT 1321
|
Length = 1344 |
| >gnl|CDD|217210 pfam02738, Ald_Xan_dh_C2, Molybdopterin-binding domain of aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 617 bits (1593), Expect = 0.0
Identities = 246/554 (44%), Positives = 325/554 (58%), Gaps = 19/554 (3%)
Query: 736 AIDAKSFHPNT--ERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMD 793
AI+ S N ER GDV+ F S D ++EGE G QEHFY+E H ++ D
Sbjct: 1 AIEHDSLFENVPHERPAEVGDVEAAFASA--DHVVEGEYTFGRQEHFYMETHGALAV-PD 57
Query: 794 HGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVP 853
+E+ + SSTQAP + V+ VLG+P KV R+GGGFG K+ S +A AA+
Sbjct: 58 EDDELTIYSSTQAPHYVRTMVARVLGIPEHKVRVIVPRVGGGFG-KKVFSLPLAVIAALA 116
Query: 854 SFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSL 913
+ L RPV LDR DM+ +G RH F YKVG +GK+ ALD++I + G DLS
Sbjct: 117 ALKLGRPVRWMLDRQEDMIATGGRHPFKITYKVGAKKDGKITALDVDILADGGAYADLSD 176
Query: 914 AVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVR 973
V+ERA H+ Y+IPN+RI G +TN P N AFRGFGGPQGM E I +A E+
Sbjct: 177 PVVERAGLHALGPYKIPNIRIEGTAVYTNLPPNGAFRGFGGPQGMFALERLIDELARELG 236
Query: 974 KSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKK 1033
P EIR N EG +GQ+L L +E + S +F R V+ FN+ N W+K
Sbjct: 237 IDPLEIRRKNLYKEGDTTPFGQRLDSGNLPECLDECRKSSEFRARRAAVEKFNIGNSWRK 296
Query: 1034 RGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFN 1093
RGI + PTK+G F ++QAGA V +Y+DG+V V+ GG+E+GQGL TKVAQ+AA
Sbjct: 297 RGIGLGPTKYGSGFGAPFLDQAGARVRLYSDGSVTVSTGGIEIGQGLETKVAQIAAEELG 356
Query: 1094 IPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK----HNFN 1149
IPL + V TDKVPN S T S +D+ G AV ACE++K R++PIA+K +
Sbjct: 357 IPLDDIRVISGDTDKVPNGSGTYGSRGTDVNGNAVRLACEKLKERLKPIAAKMLEQSEED 416
Query: 1150 -SFAELASACYVQRIDLSAHGFYITPEIDFDWITG-KGNPFRYFTYGAAFAEVEIDTLTG 1207
++ + A Y + LSA Y TP F+ TG G PF YFTYGAA EVE+D LTG
Sbjct: 417 ITWEDGIVAAYGVSVSLSATAAYATPPTGFEPGTGSYGTPFFYFTYGAAAVEVEVDCLTG 476
Query: 1208 DFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTC 1267
D ++++D G SLNPAID GQIEG F+QG+G +EE+ + P G L T
Sbjct: 477 DVKVLRTDIVMDCGTSLNPAIDEGQIEGGFVQGIGLALMEEI-------VYDPGGNLLTR 529
Query: 1268 GPGSYKIPSLNDVP 1281
G YKIP+++D+P
Sbjct: 530 SLGDYKIPTIDDIP 543
|
Length = 543 |
| >gnl|CDD|234072 TIGR02963, xanthine_xdhA, xanthine dehydrogenase, small subunit | Back alignment and domain information |
|---|
Score = 399 bits (1028), Expect = e-126
Identities = 172/551 (31%), Positives = 255/551 (46%), Gaps = 103/551 (18%)
Query: 24 YVNGLRKVLPDGLAHLTLLEYLR-DIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHC 82
++NG L D TLL+YLR D GLTGTK GC EG CGACTV+V K +
Sbjct: 4 FLNGETVTLSDVDPTRTLLDYLREDAGLTGTKEGCAEGDCGACTVVVGELVD-GGKLRYR 62
Query: 83 AVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLL 142
+VNAC+ L SL+G V+TVE + LHP+Q+++V HGSQCGFCTPGF+MS+Y+L
Sbjct: 63 SVNACIQFLPSLDGKAVVTVEDLRQPDGRLHPVQQAMVECHGSQCGFCTPGFVMSLYALY 122
Query: 143 RSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEFVCP 202
++S P + IE DAL N+ C
Sbjct: 123 KNSPAP-SRADIE---------------------------DALQGNL-----------CR 143
Query: 203 STGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTY-----------TEKELIF 251
TG Y P+ +D + ++ I
Sbjct: 144 CTG-------------------------YRPI----LDAAEAAFDYPCSDPLDADRAPII 174
Query: 252 PPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQ 311
LR + L FGG ++ P L L LK+ +PD++++ G+T+VG+ + +
Sbjct: 175 ERLRALRAGETVEL-NFGGERFIAPTTLDDLAALKAAHPDARIVAGSTDVGLWVTKQMRD 233
Query: 312 YQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQI 371
+I V V EL + DDG+EIGAAV LT+ K E E +
Sbjct: 234 LPDVIYVGQVAELKRIEETDDGIEIGAAVTLTDAYAALAKRYPE-----------LGELL 282
Query: 372 KWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMA-EEFFLGY 430
+ FA QI+N ++GGNI SPI D P +A GA+ + KG R T+ E+FF+ Y
Sbjct: 283 RRFASLQIRNAGTLGGNIANGSPIGDSPPALIALGARLTLR--KGEGRRTLPLEDFFIDY 340
Query: 431 RKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSD 490
K D GE + ++ +P P E + +K + R DDDI+ V A + L+ VV++
Sbjct: 341 GKTDRQPGEFVEALHVPRPTPGERFRAYKISKRFDDDISAVCAAFNLELDGG----VVAE 396
Query: 491 ALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDII-LKEDAPGGMVDFRKS 549
+ +GG+A A T+ ++GK W++ ++ A+ L D L + ++R
Sbjct: 397 IRIAFGGMAATPKRAAATEAALLGKPWNEATVEAAMAALAGDFTPLSDMRASA--EYRLL 454
Query: 550 LTLSFFFKFFL 560
+ +FFL
Sbjct: 455 TAKNLLRRFFL 465
|
Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and [Purines, pyrimidines, nucleosides, and nucleotides, Other]. Length = 467 |
| >gnl|CDD|224446 COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 331 bits (851), Expect = 2e-98
Identities = 203/751 (27%), Positives = 307/751 (40%), Gaps = 67/751 (8%)
Query: 620 VTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQG-DN 678
VTG+ Y DD P L+AA V S HARI+SID S A+ PG + + AE++
Sbjct: 19 VTGKGRYADDIVAP-GMLYAAFVRSPYAHARIVSIDVSEAQGLPGVLAVITAEELPAWSP 77
Query: 679 RIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAI- 737
+ +E+ A V G+ + VVAE +A+ A+ V VEYE LP ++ +EA+
Sbjct: 78 VRVELAPADEVLARGKVRYTGEPVAAVVAEDEYQARAAAELVLVEYEALPPVVDPEEALA 137
Query: 738 -DAKSFHPNTERCFRK--GDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDH 794
DA H GD D ++E + ++ +EPH V D
Sbjct: 138 EDAPVIHDELNIARDATFGDDD---AFAAAAVVVEAPYKTPRKDPNPMEPHGVVAV-PDD 193
Query: 795 GNEVHMISSTQAPQKHQKYVSHVLGLPMSKV-VCKTKRIGGGFGGKETRSAFIAAAAAVP 853
G+++ + +STQ P + + ++ VLG+P SKV V +GGGFG K AA
Sbjct: 194 GDKLTVWASTQIPHRLRGMLAAVLGIPPSKVRVISP-DVGGGFGSKGVVYVEEILAALA- 251
Query: 854 SFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSL 913
+ + RPV R+ + +G R + L K+G +G++LA+ + + G
Sbjct: 252 AVVAGRPVKWIETREELFVATGHRRATLIDVKLGADKDGRLLAIKGTVAADTG--AYNGP 309
Query: 914 AVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVR 973
V A + Y+I V I + TN P N A+RG G P+G E + +A E+
Sbjct: 310 TVPAAAAGLARGPYKIEAVYIEPYLVHTNMPPNGAYRGAGRPEGTFALERAVDELAEELG 369
Query: 974 KSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKK 1033
P EIR N G + L L K + + +
Sbjct: 370 IDPVEIRLRNLIRGGPFGLGRRYDSGDYLEELDEAAKRF-GWSERPVKP--IWTREGDLR 426
Query: 1034 RGIAMV----PTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAA 1089
RG+ P+ G GA V + DGTV V G ++GQG T +AQ+AA
Sbjct: 427 RGVGRAMYTEPSGAGPG--------EGARVRLEADGTVTVRTGATDIGQGTDTVLAQIAA 478
Query: 1090 SAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFN 1149
IP V V TD + S + + G+AV+DA ++ + A++
Sbjct: 479 EELGIPPDDVEVVHGDTDVPVGGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVAAARMLGA 538
Query: 1150 SFAELA-----------SACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFA 1198
++ + A G + P + + YGA A
Sbjct: 539 DAEDVVLEDGAFKVGGGDRRSAVSLKEVA-GKGLAPGLAV---AASFGSDNTYPYGAHIA 594
Query: 1199 EVEIDTLTGDFH-TRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHK 1257
EVE+D TG+ R+ V D G +NP + GQ+EG + G+G EE + +
Sbjct: 595 EVEVDPETGEVRVLRVVAVD-DCGRVVNPKLAEGQVEGGILMGIGMALYEEAIYDE---- 649
Query: 1258 WIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFF-LASSVF 1316
G L Y IP D P + V ++ P+ +K VGE +A ++
Sbjct: 650 ---DGQLLNSNLADYGIPRAADAP-EVEVEFVES-PSPFGPLGAKGVGEGGIIGIAPAIA 704
Query: 1317 FAIKDAISAARADAGHTGWFPLDNPATPERI 1347
A+ DA D P TPERI
Sbjct: 705 NAVFDATGKRIRDL----------PITPERI 725
|
Length = 731 |
| >gnl|CDD|226977 COG4630, XdhA, Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Score = 322 bits (826), Expect = 1e-97
Identities = 172/539 (31%), Positives = 249/539 (46%), Gaps = 82/539 (15%)
Query: 13 MGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLR-DIGLTGTKLGCGEGGCGACTVMVSR 71
M E +NG +VL D TLL+YLR D LTGTK GC EG CGACTV+V R
Sbjct: 1 MTEDRRNTIRFLLNGETRVLSDVPPTTTLLDYLRLDRRLTGTKEGCAEGDCGACTVLVGR 60
Query: 72 YDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCT 131
+ +VNAC+ L SL+G HV+TVE + + LHP+Q+++V HGSQCGFCT
Sbjct: 61 LVD-GGSLRYESVNACIRFLGSLDGTHVVTVEHLRGQDGTLHPVQQAMVDFHGSQCGFCT 119
Query: 132 PGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSS 191
PGF+MS+Y+L +S TP IE++L GNLCRCTGYRPI+ A
Sbjct: 120 PGFVMSLYALWMNSPTPSRAA-IEKALQGNLCRCTGYRPIIRA----------------- 161
Query: 192 MSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIF 251
E + + G + A T E V D
Sbjct: 162 -----AEAIA-ALGPAAGFDPLAARRTAITARLRALRDT-ETVEVGSGDDRFIV------ 208
Query: 252 PPELLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQ 311
P L+ F L + +P + ++ G+T+VG+ + +
Sbjct: 209 ----------PATLADFADL--------------LAAHPGATIVAGSTDVGLWVTKQMRD 244
Query: 312 YQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQI 371
+I V H+ EL + V GLEIGA V T+ +R + P A E
Sbjct: 245 LNPVIFVGHLAELRRIEVSTGGLEIGAGVTYTQ---AYRALAGRYP--------ALGELW 293
Query: 372 KWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMA-EEFFLGY 430
F G Q++N+ ++GGNI SPI D P +A GA + G+ R T+ E++F+ Y
Sbjct: 294 DRFGGEQVRNMGTLGGNIANGSPIGDTPPALIALGAT--LTLRSGDGRRTLPLEDYFIAY 351
Query: 431 RKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSD 490
K D GE + ++ +P P E +K + RRD+DI+ V + L+ V+D
Sbjct: 352 GKQDRQPGEFVEAVRVPLPAPSERFAAYKISKRRDEDISAVCGAFALDLDGG----RVAD 407
Query: 491 ALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKS 549
A + +GG+A A + + ++GK W++ ++ A L D P + D R S
Sbjct: 408 ARIAFGGMAATPKRASEVEAALLGKPWTEATVEAAAAALAGDF-----TP--LTDMRAS 459
|
Length = 493 |
| >gnl|CDD|236637 PRK09970, PRK09970, xanthine dehydrogenase subunit XdhA; Provisional | Back alignment and domain information |
|---|
Score = 265 bits (680), Expect = 4e-75
Identities = 219/812 (26%), Positives = 326/812 (40%), Gaps = 132/812 (16%)
Query: 605 TSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPG 664
++G + + + +VTG A+YTDD M L+A V S H ++ SID ARS PG
Sbjct: 1 MAIGKSIMRVDAIAKVTGRAKYTDDYVMA-GMLYAKYVRSPIAHGKVKSIDTEEARSLPG 59
Query: 665 FVGIFFAEDV-----------------QGDNRIGPVVADEELFASEVVTCVGQVIGVVVA 707
+F EDV D +AD L + V G + VVA
Sbjct: 60 VEAVFTWEDVPDIPFPTAGHPWSLDPNHRD------IADRALL-TRHVRHHGDAVAAVVA 112
Query: 708 ETHEEAKLASRKVQVEYEELPAILSIQEAI--DAKSFHP---NTERCF--RKGDVDICFQ 760
A+ A + ++VEYEELP I + A+ A H N + G+V +
Sbjct: 113 RDELTAEKALKLIKVEYEELPVITDPEAALAEGAPPIHNGRGNLLKQSTMSTGNVQQTIK 172
Query: 761 SGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGL 820
+ D ++G +H ++E +S + M+ + ++SSTQ P ++ V LG+
Sbjct: 173 AA--DYQVQGHYETPIVQHCHMENVTSYAY-MEDDGRITIVSSTQIPHIVRRVVGQALGI 229
Query: 821 PMSKV-VCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLN-RPVNLTLDRDIDMMISGQRH 878
P KV V K +GGGFG K+ AA + + RPV ++L R+ + + RH
Sbjct: 230 PWGKVRVIKP-YVGGGFGNKQ--DVLEEPLAAFLTSKVGGRPVKVSLSREECFLATRTRH 286
Query: 879 SFLGKYKVGFTNEGKVLALDLEIYNNAGN--SLDLSLAVLERAMFHSDNVYEIPNVRIMG 936
+F K+G +G + L++ +N G S S+A +Y +
Sbjct: 287 AFTIDIKMGVNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGNKVAY--LYPRCAYKYSS 344
Query: 937 NVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQ 996
+TN PS A RG+G PQ + E+ + A + P E R N EG
Sbjct: 345 KTVYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEFRLRNAAREG----DANP 400
Query: 997 LQHCTLFPLWNELKLSC--------DFLNARKEVDNFNLNNRWKKRGIAMV--------- 1039
L ++ L C ++ R E N N R RG+ +
Sbjct: 401 LSGKRIY--SAGLP-ECLEKGRKIFEWDKRRAECKNQQGNLR---RGVGVACFSYTSGTW 454
Query: 1040 PTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSV 1099
P I+ LMNQ DGTV V G E+GQG T +Q+ A IP+S V
Sbjct: 455 PVGLEIAGARLLMNQ---------DGTVQVQSGATEIGQGSDTVFSQMVAETVGIPVSDV 505
Query: 1100 FV-SETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIAS-------------- 1144
V S TD P AS S + G A+ A ++K ++ A+
Sbjct: 506 RVISTQDTDVTPFDPGAYASRQSYVAGPAIRKAALELKEKILAHAAVMLHQSAMNLDIID 565
Query: 1145 -----KHN---FNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAA 1196
K S ELA Y G IT E I NP +G
Sbjct: 566 GHIVVKRPGEPLMSLEELAMDAYYHP----ERGGQITAESS---IKTTTNP---PAFGCT 615
Query: 1197 FAEVEIDTLTGDFHT-RMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAA 1255
F +VE+D R+ NV D G+ LNP + GQ+ G G+GW EE+ +
Sbjct: 616 FVDVEVDIALCKVTINRILNV-HDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDEKT 674
Query: 1256 HKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSV 1315
P L YK+P++ D+P + + ++ + A K++GEPP S
Sbjct: 675 GVVRNPNLL------DYKLPTMMDLP-QLESAFVEIYEPQSAYG-HKSLGEPP---IISP 723
Query: 1316 FFAIKDAISAARADAGHTGWFPLDNPATPERI 1347
AI++A+ A TG P TP+R+
Sbjct: 724 APAIRNAVLMA------TGVAINTLPMTPQRL 749
|
Length = 759 |
| >gnl|CDD|132240 TIGR03196, pucD, xanthine dehydrogenase D subunit | Back alignment and domain information |
|---|
Score = 265 bits (679), Expect = 6e-75
Identities = 207/757 (27%), Positives = 307/757 (40%), Gaps = 67/757 (8%)
Query: 617 RLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQG 676
+VTGE +Y D P LHA + S HA I + A G + A DV G
Sbjct: 14 PDKVTGEFKYMGDLRFP-GMLHAKTLRSAHAHAEIRRVCTDAAEKLEGVQAMVTAADVPG 72
Query: 677 DNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEA 736
R G ++AD+ +FA++ + G I V AE E A+ A ++V+YEEL + +A
Sbjct: 73 LARFGIIIADQPVFAADEIRYAGDAIAAVAAEDEEIAEAALAAIEVDYEELAPMDDPDKA 132
Query: 737 I--DAKSFHPN----TERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVW 790
+ DA+ H E FR GD D F +G D + E + +G Q+H +L P +++
Sbjct: 133 LQPDAEPLHEAGNILHEAEFRHGDPDEGFAAG--DTVFEDQYELGMQDHAFLAPEAALAM 190
Query: 791 TMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAA 850
G + ++TQ K ++ ++ +P K+ +GG FGGK+ + I A
Sbjct: 191 PAADGG-FDLRAATQHGHKDREQIAACFDIPEEKIRITLAGMGGAFGGKDDLN--IQIHA 247
Query: 851 AVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLD 910
A+ + PV + DR + RH +K G +G +LA D +I + G
Sbjct: 248 ALLALASGLPVKIAQDRKESFLGGIHRHPAKITFKHGADADGNLLAHDAKIVADGGAYAS 307
Query: 911 LSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAV 970
L AVL A+ H+ Y IPN + G FTN AFRGFGG Q E + R+A
Sbjct: 308 LGPAVLAFAVEHAAGPYRIPNAHLEGISVFTNNGPAGAFRGFGGNQITFAHEAHLDRLAD 367
Query: 971 EVRKSPEEIREINFQGEGSILHYGQQ----------LQHCTLFPLW--NELKLSCDFLNA 1018
+ P ++R N + G + + ++ PL LK + + A
Sbjct: 368 ALGIDPLDLRRKNARKPGDLGPLEHRIAAPDGAAEVIEAIASRPLPKAPILKKANRAVTA 427
Query: 1019 RKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQA--GALVHVYTDGTVLVT--HGGV 1074
+RG G F + + A GA + + DGTV +
Sbjct: 428 LPGGRPAAAECGRLQRGTGAAIAMHGGGFGEGMDDAAVAGARLELAEDGTVKIRAHFACA 487
Query: 1075 EMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDAC-- 1132
E GQG Q+A + ++ T K P A ++AS + + G A+ AC
Sbjct: 488 ECGQGFLAAAEQIAMEELGCAAEDISIAIADTAKGPKAGSSSASRGTSMSGGAIQGACAA 547
Query: 1133 --EQIKARM---------EPIASKHNFNSFA------ELASACYVQRIDLSAHG------ 1169
Q+KAR A N A + +A V + +A G
Sbjct: 548 FAAQLKARAAETAGLPAEVVEAPAENLIPGAAEIVGDKNEAALRVPLAEAAADGPIAAET 607
Query: 1170 -FYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAI 1228
F+ P D G+G+ F AA AEV++D GD + G LNP
Sbjct: 608 AFHDFPTSALDADVGQGDGHFAFAAAAAAAEVDVDLDLGDVKLIDCAHAIAAGPVLNPLA 667
Query: 1229 DVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVP-LKFNVS 1287
GQIEG LG +EE K D G + Y IP + DVP L F
Sbjct: 668 LRGQIEGGAAMALGLALMEEAKMTD--------GRVAAENFDDYLIPGIADVPDLDF--- 716
Query: 1288 LLKGHPNVKAIHSSKAVGEPPFFLAS-SVFFAIKDAI 1323
+ A + K VGE A+ ++ AI DA+
Sbjct: 717 IAIEDLMKDAPYGPKGVGEAGTCAATPAIIAAIHDAV 753
|
This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin. Length = 768 |
| >gnl|CDD|132354 TIGR03311, Se_dep_Molyb_1, selenium-dependent molybdenum hydroxylase 1 | Back alignment and domain information |
|---|
Score = 236 bits (603), Expect = 2e-64
Identities = 186/645 (28%), Positives = 286/645 (44%), Gaps = 67/645 (10%)
Query: 619 QVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDN 678
+V GE Y DD + L+ + + S+ P A + SID + A PG V + A+D+ G+
Sbjct: 174 KVLGEGVYVDDMQIE-GMLYGSALRSKYPRALVKSIDITVALKHPGVVAVLTAKDIPGNR 232
Query: 679 RIGPVVADEELFAS--EVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEA 736
+IG + D + E+ VG + +V A++ E + A ++V+YEELP + S +EA
Sbjct: 233 KIGHIFKDWPALIAVGEITRYVGDAVALVAAKSKEALREALNLIKVDYEELPPLTSPEEA 292
Query: 737 I--DAKSFHPN----TERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVW 790
+ A + HP +E +GD + ++ ++ EH +LEP S++
Sbjct: 293 LAEGAPAIHPKGNILSEEHVVRGDAEEALEN--SAYVVTNHYSTPFTEHAFLEPESAL-- 348
Query: 791 TMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAA 850
+ G+ V + +STQ Q+ ++ +LGLP K+ K +GGGFGGKE S + A
Sbjct: 349 AVPEGDGVIIYTSTQGVYDEQRELASLLGLPKEKIRVINKFVGGGFGGKEDMS--VQHHA 406
Query: 851 AVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLD 910
A+ ++ RPV +TL R +++ +RH+ + G G + A+ +I + G
Sbjct: 407 ALLAWATKRPVKVTLTRKESILVHPKRHAMEMTFTTGCDEAGNLTAMKADIIADTGAYAS 466
Query: 911 LSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAV 970
L VL+RA H+ Y+ PNV I G +TN P AFRGFG Q E + +A
Sbjct: 467 LGGPVLQRACTHAAGPYKYPNVDIRGTAVYTNNPPAGAFRGFGVTQSNFAMECNLNLLAE 526
Query: 971 EVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNR 1030
+V SP EIR N G L GQ + T + L A KEV +
Sbjct: 527 KVGLSPWEIRFKNAVEPGDTLPNGQVVSEGTAIK---------ETLLAVKEV-----YEK 572
Query: 1031 WKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAAS 1090
GIA G+ + + V DG V + +GQGL T + Q+
Sbjct: 573 SPCAGIACAFKNSGVGVGIPDTGRCNLAVE---DGKVHIRTSAACIGQGLGTVLTQIVCE 629
Query: 1091 AFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNS 1150
+P + T P++ T AS S G A A ++K +
Sbjct: 630 TTGLPPEVIVCELPDTALTPDSGTTTASRQSLFTGEATRRAAAKLKEAL----------R 679
Query: 1151 FAELASACYVQRIDLSAHGFY-----ITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTL 1205
LA +L FY IT ++ D K NP + YG A +V I
Sbjct: 680 GRTLA--------ELEGEEFYGEYHSITDPLNSD----KENPVSHVGYGYA-TQVVILDD 726
Query: 1206 TGDFHTRMANVIL--DLGYSLNPAIDVGQIEGAFIQGLGWLALEE 1248
G ++ V+ D+G ++NP GQIEG + GLG+ AL E
Sbjct: 727 AG----KVEKVVAAYDVGRAINPLNLEGQIEGGIVMGLGY-ALTE 766
|
Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme. Length = 848 |
| >gnl|CDD|216208 pfam00941, FAD_binding_5, FAD binding domain in molybdopterin dehydrogenase | Back alignment and domain information |
|---|
Score = 212 bits (543), Expect = 2e-63
Identities = 74/178 (41%), Positives = 101/178 (56%), Gaps = 10/178 (5%)
Query: 272 KWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKD 331
+YRP L+ L L +K PD+KL+ G T +G EM+L+ + VLI + +PEL +
Sbjct: 4 TYYRPASLEEALALLAKGPDAKLVAGGTSLGPEMKLRLARPPVLIDINGIPELRGIEETG 63
Query: 332 DGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT 391
DGLEIGAAV LT+L+ A E ++ A QI+NVA++GGNI
Sbjct: 64 DGLEIGAAVTLTDLIDS---------PLVAEVFPALAEALRKIASPQIRNVATIGGNIAN 114
Query: 392 ASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWT 449
ASPISDL P +A A + +G RT E+FFLGYRK DL GE+L ++ +P
Sbjct: 115 ASPISDLPPALLALDATVELRSPEGR-RTVPLEDFFLGYRKTDLEPGELLTAVRIPLP 171
|
Length = 171 |
| >gnl|CDD|132238 TIGR03194, 4hydrxCoA_A, 4-hydroxybenzoyl-CoA reductase, alpha subunit | Back alignment and domain information |
|---|
Score = 210 bits (535), Expect = 2e-56
Identities = 179/782 (22%), Positives = 303/782 (38%), Gaps = 101/782 (12%)
Query: 619 QVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDN 678
+VTG+A+YT D P L ++ S HARIL+ID S A + PG + + D
Sbjct: 9 KVTGKAKYTADLAAP-GALVGRILRSPHAHARILAIDTSEAEALPGVIAVVTGADCPVPY 67
Query: 679 RIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAID 738
+ P+ +E A + V G + V A A+ A ++VEYEELPA + + A+
Sbjct: 68 GVLPIAENEYPLARDKVRYRGDPVAAVAAVDEVTAEKALALIKVEYEELPAYMDPKAAMK 127
Query: 739 AKS--FHPNTERCFRK------GDVDICFQSGQCDKIIEGEVRVGGQ-EHFYLEPHSSVV 789
A + H N + GDV F +I + + H ++EP++++
Sbjct: 128 AGAILLHDNKPGNIEREVHNEFGDVAAAFAEAD---LIREKTFTCAEVNHAHMEPNATL- 183
Query: 790 WTMDHGNEVHMI---SSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFI 846
++ M+ S TQ P ++ L + +++ +GGGFG + F
Sbjct: 184 --AEYDPVRGMLTLNSVTQVPYYVHLKLARCLQMDSARIRVIKPFLGGGFGARVEPLNF- 240
Query: 847 AAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAG 906
A + + V L R+ + R K K+G +GK+ A E+ G
Sbjct: 241 EIIAGLLARKAKGTVRLLQTREETFITHRGRPQTYVKMKIGLKKDGKITACAAEVVQRGG 300
Query: 907 --NSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENW 964
+ + A+ H +Y+IP V+ G +TN P A RG G E+
Sbjct: 301 AYAGYGIVTILYAGALLHG--LYDIPAVKYDGYRVYTNTPPCGAMRGHGTVDTRAAFESL 358
Query: 965 IQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDN 1024
+ +A E+ P IR N ++ ++ L +++ + + + +
Sbjct: 359 LDEMAAELGIDPFAIRRRNLLQAPTVTMNDLRVMSYGLPECLEKVEQASGWEERKGRLP- 417
Query: 1025 FNLNNRWKKRGIAMVPTKF--GISFTLKLMNQ--AGALVHVYTDGTVLVTHGGVEMGQGL 1080
K RG+ + + F G + + + A + + DG + + G ++GQG
Sbjct: 418 -------KGRGLGIACSHFVSGSAKPIHFTGEPHATVALKLDFDGGITLLTGAADIGQGS 470
Query: 1081 HTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARME 1140
T +QVAA + LS + V + P + + +S + + G A +DA E++K +
Sbjct: 471 STIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNAAIDAAEELKGVLV 530
Query: 1141 PIASKH----------------------NFNSFAELASACYVQRIDLSAHGFYITPEIDF 1178
A+K SF E+ A V ++ G Y P
Sbjct: 531 AAAAKKLDAREEDIECAGEMFFVSGSADPGLSFQEVVKAALVDSGTITVKGTYTCPP--- 587
Query: 1179 DWITGKGNPFR--------YFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDV 1230
+G R F+Y A EV +D TG V +D G ++NP
Sbjct: 588 ---EFQGGKKRGGAVGSTMGFSYAAQVVEVSVDEETGKVTVHKVWVAVDCGKAINPLAVE 644
Query: 1231 GQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLK 1290
GQ++GA G+G EE + + K Y++P++ + P V +++
Sbjct: 645 GQVQGAVWMGMGQALSEETVYDNGRMK--------HASLLDYRVPTIVESP-DIEVIIVE 695
Query: 1291 GH-PN----VKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPE 1345
PN K G P A+ DA+ RA D P TP+
Sbjct: 696 SMDPNGPFGAKEASEGALAGFLPAIHN-----AVYDAV-GVRAT---------DLPLTPD 740
Query: 1346 RI 1347
R+
Sbjct: 741 RV 742
|
This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA. Length = 746 |
| >gnl|CDD|182084 PRK09800, PRK09800, putative hypoxanthine oxidase; Provisional | Back alignment and domain information |
|---|
Score = 188 bits (478), Expect = 2e-48
Identities = 205/822 (24%), Positives = 324/822 (39%), Gaps = 151/822 (18%)
Query: 620 VTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFV---------GIFF 670
V + Y +D + + ++ S HA I +D S A + PG V I++
Sbjct: 185 VQAKPCYVEDR-VTADACVIKMLRSPHAHALITHLDVSKAEALPGVVHVITHLNCPDIYY 243
Query: 671 AEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAI 730
Q P+ D +F ++ VG + VVAE+ E A A + + VEYE L +
Sbjct: 244 TPGGQSAPEPSPL--DRRMFGKKMRH-VGDRVAAVVAESEEIALEALKLIDVEYEVLKPV 300
Query: 731 LSIQEAI--DAKSFH----------------------PNTERCF---------RK----- 752
+SI EA+ DA H E RK
Sbjct: 301 MSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAAS 360
Query: 753 -----GDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAP 807
GD+D F D IIE + E H + +T G+ + + +STQ P
Sbjct: 361 IHGHIGDMDKGF--ADADVIIERTYNSTQAQQCPTETH--ICFTRMDGDRLVIHASTQVP 416
Query: 808 QKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDR 867
++ V+ ++G+ KV +R+GGGFG K+ + A + + RPV R
Sbjct: 417 WHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQ--DILLEEVCAWATCVTGRPVLFRYTR 474
Query: 868 DIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVY 927
+ + + + RH K+G +G++ A+ ++ N G + SL V S +Y
Sbjct: 475 EEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLY 534
Query: 928 EIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGE 987
NV ++N N A++G+G P+G + +A +++ EI E N E
Sbjct: 535 PCDNVDFQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHE 594
Query: 988 GSILH----YGQ--------QLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWK-KR 1034
G L G+ C L + + + + + + + N W R
Sbjct: 595 GQELKILGAIGEGKAPTSVPSAASCALEEILRQGREMIQWSSPKPQ------NGDWHIGR 648
Query: 1035 GIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNI 1094
G+A++ K GI ++QA ++ + +DGT +V GG ++G GL T V ++AA +
Sbjct: 649 GVAIIMQKSGIPD----IDQANCMIKLESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHC 704
Query: 1095 PLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIK-------ARM--EPIAS- 1144
P V V TD AS+ + G A A E ++ A+M EP+A
Sbjct: 705 PPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEPVADV 764
Query: 1145 ----------KHNFNSFAELASACYVQRID-------LSAHGFYITPEIDFDWITGKGNP 1187
K SF ++A + + L G YITP+
Sbjct: 765 QLATPGVVRGKKGEVSFGDIA-----HKGETGTGFGSLVGTGSYITPDFA---------- 809
Query: 1188 FRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALE 1247
F YGA FAEV ++T TG+ +LD G +NP + +GQI GA ++ +G E
Sbjct: 810 ---FPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATLRAIGHSMSE 866
Query: 1248 ELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEP 1307
E+ + G T SY P + D+P F L + S VG
Sbjct: 867 EIIYDAE-------GHPLTRDLRSYGAPKIGDIPRDFRAVL---------VPSDDKVG-- 908
Query: 1308 PFFLASSVFFAIKDAISAARADAGH--TGWFPLDNPATPERI 1347
PF S + A + A A A H G + + TPE+I
Sbjct: 909 PFGAKSISEIGVNGA-APAIATAIHDACGIWLREWHFTPEKI 949
|
Length = 956 |
| >gnl|CDD|224991 COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 169 bits (430), Expect = 2e-48
Identities = 70/148 (47%), Positives = 92/148 (62%), Gaps = 12/148 (8%)
Query: 38 HLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEG 96
LL+ LRD +GLTGTK GCG G CGACTV+V D + AVN+CL EG
Sbjct: 20 RTPLLDVLRDELGLTGTKKGCGHGQCGACTVLV---DGE-------AVNSCLTLAVQAEG 69
Query: 97 MHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEE 156
+ T+EG+ + GLHP+Q++ + QCG+CTPG IMS +LL + PT+E+I E
Sbjct: 70 AEITTIEGLAKKDGGLHPVQQAFLEHDAFQCGYCTPGQIMSATALLDRNPA-PTDEEIRE 128
Query: 157 SLAGNLCRCTGYRPIVDAFRVFAKTNDA 184
+L+GNLCRCTGY+ IV A A+ A
Sbjct: 129 ALSGNLCRCTGYQNIVAAILDAAERLRA 156
|
Length = 156 |
| >gnl|CDD|132356 TIGR03313, Se_sel_red_Mo, probable selenate reductase, molybdenum-binding subunit | Back alignment and domain information |
|---|
Score = 184 bits (469), Expect = 2e-47
Identities = 183/747 (24%), Positives = 301/747 (40%), Gaps = 119/747 (15%)
Query: 626 YTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFF---AEDVQ----GDN 678
Y +D +P + ++ S PHA I +D S A + PG V + D+ G +
Sbjct: 187 YVEDR-VPADACVIKMLRSPHPHAWITHLDVSKAEALPGVVHVITHLNCPDIYYTPGGQS 245
Query: 679 RIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAI- 737
P D +F ++ VG + VVAE+ E A A + ++VEY+ L ++SI EA+
Sbjct: 246 APEPSPLDRRMFGQKM-RHVGDRVAAVVAESEEIALHALKLIEVEYDVLTPVMSIDEAMA 304
Query: 738 -DAKSFH----------------PNTERCFRKGDVDICFQSG------------------ 762
+A H N R + I F G
Sbjct: 305 AEAPIVHDEPIVYGAGAPDDLEEQNANADPRGEHMIINFPIGSRPRKNIAASVHGHIGDL 364
Query: 763 -----QCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHV 817
+ D IIE + E H + +T G + + +STQ P ++ V+ +
Sbjct: 365 NKGFAEADVIIERTYESTQAQQCPTETH--ICFTYMDGERLVIHASTQVPWHVRRQVARI 422
Query: 818 LGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQR 877
+G+ KV +R+GGGFG K+ + A +++ RPV R+ + + + R
Sbjct: 423 VGMKQHKVHVIKERVGGGFGSKQ--DILLEEVCAWATWVTGRPVYFRYTREEEFICNTSR 480
Query: 878 HSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGN 937
H K+G +GK+ A+D++ N G + SL V S +Y NV
Sbjct: 481 HVAKVTVKLGAKKDGKLTAIDMDFRANTGPYGNHSLTVPSNGPALSLPLYPCDNVDFRVT 540
Query: 938 VCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHY---- 993
++N A++G+G P+G + +A E+ E+ E N EG L
Sbjct: 541 TYYSNICPTGAYQGYGAPKGNFALTMAMAELAEELGIDQLEMIETNRVHEGQELKILGAI 600
Query: 994 GQ--------QLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWK-KRGIAMVPTKFG 1044
G+ + C L + + + ++ + ++ WK RG+A++ K G
Sbjct: 601 GEGKMPTSVPKAASCALEEILRQGRELIEWDSPKQA------KGDWKIGRGVAIIMQKSG 654
Query: 1045 ISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSET 1104
I ++QA ++ + +DGT +V GG ++G GL T V+++ A + P+ V V
Sbjct: 655 IPD----IDQANCMIKLESDGTFIVHSGGADIGTGLDTVVSKLTAEVLHCPMDDVHVISG 710
Query: 1105 STDKVPNASPTAASASSDIYGAAVLDACEQIKARM---------EPIAS----------- 1144
TD AS+ + G A A E ++ ++ EP+A
Sbjct: 711 DTDHALFDKGAYASSGTCFSGNAAKRAAENLREKILFHGAEMLGEPVADVDLAAPGLVRG 770
Query: 1145 KHNFNSFAELASACYVQRI--DLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEI 1202
K S+ ++A L G YIT E F YGA FAEV +
Sbjct: 771 KTGEVSYFDIAHKAETGTGFGQLVGTGSYITSEFAF-------------PYGANFAEVAV 817
Query: 1203 DTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPG 1262
+T TG+ +LD G +NP + +GQI GA ++ +G EE+ + D
Sbjct: 818 NTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATMRAIGHSMTEEIVYDDNGIP----- 872
Query: 1263 CLYTCGPGSYKIPSLNDVPLKFNVSLL 1289
T SY P + D+P F L+
Sbjct: 873 --LTRDLKSYGAPKIGDIPRDFRAVLV 897
|
Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity. Length = 951 |
| >gnl|CDD|214971 smart01008, Ald_Xan_dh_C, Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 4e-41
Identities = 57/108 (52%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 621 TGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRI 680
TGEA Y DD P LHAA+V S HARI SID S AR+ PG V + A+DV G N
Sbjct: 1 TGEARYGDD-IRLPGMLHAAVVRSPVAHARIKSIDTSAARAMPGVVAVLTAKDVPGLNDF 59
Query: 681 GPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELP 728
GP+ DE + A + V VGQ + VVAET E A+ A+ V+VEYEELP
Sbjct: 60 GPLGPDEPVLADDKVRYVGQPVAAVVAETEEAARDAAEAVKVEYEELP 107
|
Aldehyde oxidase catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups. Length = 107 |
| >gnl|CDD|131469 TIGR02416, CO_dehy_Mo_lg, carbon-monoxide dehydrogenase, large subunit | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 6e-40
Identities = 198/816 (24%), Positives = 306/816 (37%), Gaps = 142/816 (17%)
Query: 620 VTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDN- 678
+ G+ Y DD +P LH +V S HARI SID S A++ PG + A D++ N
Sbjct: 6 IQGKGNYVDDVKLP-GMLHGDIVRSPHAHARIKSIDTSAAKALPGVFAVLTAADLKPLNL 64
Query: 679 RIGPVVADE--ELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILS---- 732
P +A + + A E V Q + VVA+ A A V+V+YE LP ++
Sbjct: 65 HWMPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVVIDPFKA 124
Query: 733 -------IQEAIDAKSFHPNTER-----CFRKGDVDICFQSGQCDKIIEGEVRVGGQEHF 780
++E + K+ + R FR D D + V Q
Sbjct: 125 LEPDAPVLREDLKGKTTGAHGARKHHNHIFRWEIGD----KAATDAVFAKAEVVVKQMMT 180
Query: 781 YLEPHSS------VVWTMDH-GNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIG 833
Y H S V +MD E+ + + QAP + VS + GLP K+ + IG
Sbjct: 181 YPRVHPSPLETCGCVASMDPIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIRVISPDIG 240
Query: 834 GGFGGK-ETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEG 892
GGFG K ++ A V S +L PV DR ++ + + ++ T +G
Sbjct: 241 GGFGNKVGIYPGYV--CAIVASIVLGVPVKWVEDRMENLSTTSFARDYHMTGELAATKDG 298
Query: 893 KVLALDLEIYNNAGNSLDLSLAVLE--RAMFH-SDNVYEIPNVRIMGNVCFTN-FPSNTA 948
K+LA+ + + G + D + F+ Y+IP + +TN P A
Sbjct: 299 KILAMRCNVLADHG-AFDACADPSKWPAGFFNICTGSYDIPVAHCAVDGVYTNKAPGGVA 357
Query: 949 FR-GFGGPQGMLITENWIQRVAVEVRKSPEEIREINF-QGEGSILHYGQQLQHCTLFPLW 1006
+R F + + E + +A + ++R NF Q E FP
Sbjct: 358 YRCSFRVTEAVYAIERAVDTLAQRLEMDSADLRIKNFIQPEQ--------------FPYT 403
Query: 1007 NELKL---SCDFLNARKEVDNFNLNNRWK-------KRGIAMVPTKFGISFTLKLMNQA- 1055
L S D+ A K+ + ++ + KRG GISF +++
Sbjct: 404 APLGWEYDSGDYPLAMKKAMDTVDYHQLRAEQAAKRKRGETRELMGIGISFFTEIVGAGP 463
Query: 1056 -------------GALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVS 1102
+ ++ G+ + G GQG T AQ+ A+ IP + V
Sbjct: 464 SKNCDILGVGMFDSCEIRIHPTGSAIARMGTKSQGQGHETTYAQIIATELGIPAEDIMVE 523
Query: 1103 ETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIAS------------------ 1144
E TD P T S S+ + GAA A +IKA+ + IA+
Sbjct: 524 EGDTDTAPYGLGTYGSRSTPVAGAATALAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFR 583
Query: 1145 ----KHNFNSFAELASACYVQ-----RIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGA 1195
F + A++A A Y L A +Y P + + +GA
Sbjct: 584 VKGDPSKFKTMADIAWAAYNSPPPGLEPGLEAVNYYDPPNMT-------------YPFGA 630
Query: 1196 AFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAA 1255
F V+ID TG R + D G +NP I GQI G +G +E+++ +
Sbjct: 631 YFCVVDIDVDTGVAKVRRFYALDDCGTRINPMIIEGQIHGGLTEGFAVAMGQEIRFDEQ- 689
Query: 1256 HKWIPPGCLYTCGPGSYKIPSLNDVP---LKFNVSLLKGHP-NVKAIHSSKAVGEPPFFL 1311
G + Y +P+ + P V+ HP K + S VG P F
Sbjct: 690 ------GNVLGASLMDYFLPTAVETPHWETDHTVTPSPHHPIGAKGVGESPHVGSVPCFS 743
Query: 1312 ASSVFFAIKDAISAARADAGHTGWFPLDNPATPERI 1347
A+ DA A GH +D P T R+
Sbjct: 744 N-----AVVDAY--AFLGVGH-----IDMPHTAWRV 767
|
This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins [Energy metabolism, Other]. Length = 770 |
| >gnl|CDD|216430 pfam01315, Ald_Xan_dh_C, Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 5e-38
Identities = 54/112 (48%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Query: 621 TGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR- 679
TGEA Y DD P P N + A V S + HARI SID S A + PG V + A+D+ G NR
Sbjct: 1 TGEAVYVDDIPAPGNL-YLAFVRSTKAHARIKSIDTSAALALPGVVAVITAKDLPGLNRG 59
Query: 680 IGPVVADEE---LFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELP 728
IG +E L A + V VGQ I VVA+ E A+ A+ V+VEYEELP
Sbjct: 60 IGAPNPLDEPDALLADDKVRFVGQPIAAVVADDEETARDAAELVKVEYEELP 111
|
Length = 111 |
| >gnl|CDD|201981 pfam01799, Fer2_2, [2Fe-2S] binding domain | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 2e-35
Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Query: 101 TVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTP-PTEEQIEESLA 159
TVEG+ LHP+Q++ V QCG+CTPG +M+ +LL + P PTEE+I E+L+
Sbjct: 1 TVEGLAE-DGKLHPVQQAFVEHGAVQCGYCTPGMVMAATALLE--RNPDPTEEEIREALS 57
Query: 160 GNLCRCTGYRPIVDAFR 176
GNLCRCTGYR IVDA +
Sbjct: 58 GNLCRCTGYRRIVDAVK 74
|
Length = 75 |
| >gnl|CDD|132242 TIGR03198, pucE, xanthine dehydrogenase E subunit | Back alignment and domain information |
|---|
Score = 129 bits (325), Expect = 1e-34
Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 17/160 (10%)
Query: 23 LYVNGL-RKVLPDGLAHLTLLEYLR-DIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCV 80
VNG +V L+ L LR ++ LTGTK+ CG G CGAC+V++ D K
Sbjct: 6 FTVNGQAWEVAAVPTTRLSDL--LRKELQLTGTKVSCGIGRCGACSVLI---DGK----- 55
Query: 81 HCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYS 140
NACL Y +G + T+EG+ ++ L P Q + + G QCG+CTPG ++++ +
Sbjct: 56 --LANACLTMAYQADGHEITTIEGI--AENELDPCQTAFLEEGGFQCGYCTPGMVVALKA 111
Query: 141 LLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
L R + P++E +EE L+GNLCRCTGY I+ + +
Sbjct: 112 LFRETPQ-PSDEDMEEGLSGNLCRCTGYGGIIRSACRIRR 150
|
This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component. Length = 151 |
| >gnl|CDD|132237 TIGR03193, 4hydroxCoAred, 4-hydroxybenzoyl-CoA reductase, gamma subunit | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 1e-33
Identities = 66/160 (41%), Positives = 91/160 (56%), Gaps = 18/160 (11%)
Query: 23 LYVNGLRK--VLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKC 79
L VNG + + D + L++YLRD GLTGTK GC G CGACTV+V D +
Sbjct: 4 LTVNGRWREDAVADNM---LLVDYLRDTVGLTGTKQGCDGGECGACTVLV---DGR---- 53
Query: 80 VHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMY 139
AC + + G V TVEG+ L +Q++ G+QCGFCTPG IM+
Sbjct: 54 ---PRLACSTLAHRVAGRKVETVEGLATNGR-LSRLQQAFHERLGTQCGFCTPGMIMAAE 109
Query: 140 SLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFA 179
+LLR + + P+ ++I +LAGNLCRCTGY I+++ A
Sbjct: 110 ALLRRNPS-PSRDEIRAALAGNLCRCTGYVKIIESVEAAA 148
|
4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme. Length = 148 |
| >gnl|CDD|182139 PRK09908, PRK09908, xanthine dehydrogenase subunit XdhC; Provisional | Back alignment and domain information |
|---|
Score = 118 bits (296), Expect = 2e-30
Identities = 57/144 (39%), Positives = 77/144 (53%), Gaps = 12/144 (8%)
Query: 39 LTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMH 98
L E LR+ GL K GC G CGACTV+V A+++CL EG
Sbjct: 26 TPLSELLREQGLLSVKQGCCVGECGACTVLVD----------GTAIDSCLYLAAWAEGKE 75
Query: 99 VITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLL-RSSQTPPTEEQIEES 157
+ T+EG + L +Q++ +S QCGFCTPG IM+ ++L + + P T +I
Sbjct: 76 IRTLEGEA-KGGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAKPREKPLTITEIRRG 134
Query: 158 LAGNLCRCTGYRPIVDAFRVFAKT 181
LAGNLCRCTGY+ IV+ KT
Sbjct: 135 LAGNLCRCTGYQMIVNTVLDCEKT 158
|
Length = 159 |
| >gnl|CDD|217566 pfam03450, CO_deh_flav_C, CO dehydrogenase flavoprotein C-terminal domain | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 2e-30
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 458 FKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSW 517
+K A RRDDDIA+VNA RV L DE+ V+DA + +GGVAP L A + + +VGK
Sbjct: 3 YKIARRRDDDIAIVNAAFRVTL---DEDGTVTDARIAFGGVAPTPLRATEAEAALVGKPL 59
Query: 518 SQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWV 562
+E L+ A L D+ D G ++R+ L +F L
Sbjct: 60 DEETLEAAAAALAEDLTPLSDV-RGSAEYRRHLARVLLRRFLLEA 103
|
Length = 103 |
| >gnl|CDD|182175 PRK09971, PRK09971, xanthine dehydrogenase subunit XdhB; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 3e-30
Identities = 70/252 (27%), Positives = 112/252 (44%), Gaps = 18/252 (7%)
Query: 274 YRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDG 333
+ L+ +EL + P +KL+ G T+V I++ +Y+ L+S+ ++ EL + + +DG
Sbjct: 8 HEAATLEEAIELLADNPQAKLIAGGTDVLIQLHHHNDRYRHLVSIHNIAELRGITLAEDG 67
Query: 334 -LEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 392
+ IGAA T++ + ++ A E G QI+NVA++GGNIC
Sbjct: 68 SIRIGAATTFTQI---IEDPIIQK------HLPALAEAAVSIGGPQIRNVATIGGNICNG 118
Query: 393 SPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPF 452
+ +D P A AK I G +R F+ G KV L EIL++ +P P+
Sbjct: 119 ATSADSAPPLFALDAKLEIHSPNG-VRFVPINGFYTGPGKVSLEHDEILVAFIIP-PEPY 176
Query: 453 EFVKE--FKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKT 510
E K A R DIA + G V + D L +G AP + + +
Sbjct: 177 EHAGGAYIKYAMRDAMDIATI--GCAVLCRLDNGN--FEDLRLAFGVAAPTPIRCQHAEQ 232
Query: 511 FIVGKSWSQELL 522
G + E L
Sbjct: 233 TAKGAPLNLETL 244
|
Length = 291 |
| >gnl|CDD|224238 COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 1e-29
Identities = 83/284 (29%), Positives = 128/284 (45%), Gaps = 26/284 (9%)
Query: 272 KWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKD 331
++YRP ++ L L ++ PD+K L G T++ M+L + L+ + + EL + +
Sbjct: 5 EYYRPASVEEALNLLARAPDAKYLAGGTDLLPLMKLGIERPDHLVDINGLDELLGIVTTE 64
Query: 332 DG-LEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC 390
G L IGA V LTE+ R A E A Q++N A++GGN+C
Sbjct: 65 GGSLRIGALVTLTEIA---------RHPAVRRIPPALSEAASAIASPQVRNRATIGGNLC 115
Query: 391 TASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLP--- 447
A P +DL P +A A+ I G RT E+FF G + L GE++ ++ LP
Sbjct: 116 NADPAADLAPALLALDAEVEIRSPGGE-RTIPIEDFFRGPGETALEPGELITAVILPPPP 174
Query: 448 WTRPFEFVKEFKQAHRRDD-DIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAK 506
R + K RR IALV+ K VS+A + GGVAP +
Sbjct: 175 AARGAYYKKVR----RRASFAIALVSVAA------KLRGDRVSEARVALGGVAPKPWRLE 224
Query: 507 KTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSL 550
+ ++GK S E L+ A + + D G ++R+ L
Sbjct: 225 DAEAALLGKPLSLETLEAAAEAAMQEAAPISD-VRGSAEYRRKL 267
|
Length = 284 |
| >gnl|CDD|132354 TIGR03311, Se_dep_Molyb_1, selenium-dependent molybdenum hydroxylase 1 | Back alignment and domain information |
|---|
Score = 123 bits (309), Expect = 3e-28
Identities = 62/142 (43%), Positives = 84/142 (59%), Gaps = 14/142 (9%)
Query: 40 TLLEYLR-DIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMH 98
LLE+LR D+ LTG K GCGEG CGACTV+V + K AV AC L G
Sbjct: 17 KLLEFLREDLRLTGVKNGCGEGACGACTVIV---NGK-------AVRACRFTTAKLAGKE 66
Query: 99 VITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESL 158
+ TVEG+ R+ ++ + ++ QCGFC PG ++S +LL PTE +I+++L
Sbjct: 67 ITTVEGLTEREKDVYAW--AFAKAGAVQCGFCIPGMVISAKALL-DKNPNPTEAEIKKAL 123
Query: 159 AGNLCRCTGYRPIVDAFRVFAK 180
GN+CRCTGY I+ A R+ AK
Sbjct: 124 KGNICRCTGYVKIIKAVRLAAK 145
|
Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme. Length = 848 |
| >gnl|CDD|236910 PRK11433, PRK11433, aldehyde oxidoreductase 2Fe-2S subunit; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 4e-26
Identities = 57/152 (37%), Positives = 85/152 (55%), Gaps = 30/152 (19%)
Query: 40 TLLEYLRD-IGLTGTKLGCGEGGCGACTVMVS--RYDKKSKKCVHCAVNACLAPLYSLEG 96
TLL+ LR+ + LTGTK GC G CGACTV+V+ R +NACL +G
Sbjct: 70 TLLDALREHLHLTGTKKGCDHGQCGACTVLVNGRR------------LNACLTLAVMHQG 117
Query: 97 MHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLR------------- 143
+ T+EG+G+ + LHP+Q + V+ G QCG+CTPG I S ++L+
Sbjct: 118 AEITTIEGLGSPDN-LHPMQAAFVKHDGFQCGYCTPGQICSSVAVLKEIKDGIPSHVTVD 176
Query: 144 -SSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 174
++ T ++I E ++GN+CRC Y I++A
Sbjct: 177 LTAAPELTADEIRERMSGNICRCGAYSNILEA 208
|
Length = 217 |
| >gnl|CDD|215021 smart01092, CO_deh_flav_C, CO dehydrogenase flavoprotein C-terminal domain | Back alignment and domain information |
|---|
Score = 83.0 bits (206), Expect = 5e-19
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 458 FKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSW 517
+K++ RRD DIALV+A + + L+ V++A + GGVAP A + + +VGK
Sbjct: 2 YKKSRRRDGDIALVSAAVALTLDGG----RVTEARIALGGVAPTPKRAAEAEAALVGKPL 57
Query: 518 SQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWV 562
+ E L A ++R+ L + + L
Sbjct: 58 TDEALARAAAAALAQDFTPLSDMRASAEYRRQLAANLLRRALLEA 102
|
Length = 102 |
| >gnl|CDD|234145 TIGR03199, pucC, xanthine dehydrogenase C subunit | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 1e-07
Identities = 65/271 (23%), Positives = 103/271 (38%), Gaps = 33/271 (12%)
Query: 276 PLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQV-----LISVTHVPELNVLNVK 330
P L L K PDS + G+T + +L+ + + L+S+ + EL ++
Sbjct: 1 PAALDEAWSLLEKAPDSTFVSGSTLL----QLQWEKGTLPMKQHLVSLEGIDELKGISTS 56
Query: 331 DDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC 390
D + IGA L E K ++ + F++ A ++N A++GGNI
Sbjct: 57 DTHVSIGALTTLNECRK--NPLIKR-------ALPCFVDAASAIAAPGVRNRATIGGNI- 106
Query: 391 TASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFL-PWT 449
AS I D P + GA+ IV K IR + + D I+ + + P
Sbjct: 107 -ASGIGDFIPALLVLGAEL-IVYQKELIRLPLGAWL----SEEDFKPTAIVTRVIIGPRA 160
Query: 450 RPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVA--PLSLSAKK 507
EFV K R +LV R L D + + L GG P L +
Sbjct: 161 ETGEFVFYHKVGRRETFTGSLVVVAGRFLL---DGSQTIKEIRLAVGGADITPRRLLDSE 217
Query: 508 TKTFIVGKSWSQELLQNALKILQTDIILKED 538
K ++ W LL K + ++ D
Sbjct: 218 AK--LMAPPWDPHLLAELYKTIIQELPFSSD 246
|
This gene has been characterized in B. subtilis as the FAD binding-subunit of xanthine dehydrogenase (pucC), acting in conjunction with pucD, the molybdopterin-binding subunit and pucE, the FeS-binding subunit. Length = 264 |
| >gnl|CDD|132239 TIGR03195, 4hydrxCoA_B, 4-hydroxybenzoyl-CoA reductase, beta subunit | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 4e-07
Identities = 49/217 (22%), Positives = 81/217 (37%), Gaps = 50/217 (23%)
Query: 275 RPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGL 334
RP L + + +P ++ L G T++ +R Q + L+ +T + E+ L+ DGL
Sbjct: 9 RPASLADAVAALAAHPAARPLAGGTDLLPNLRRGLGQPETLVDLTGIDEIAQLSTLADGL 68
Query: 335 EIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT--- 391
IGA V L L V T P A + + AG + A++GGN+C
Sbjct: 69 RIGAGVTL-AALAEDALVRTRWP--------ALAQAARAVAGPTHRAAATLGGNLCLDTR 119
Query: 392 -----------------------------------ASPISDLNPLWMASGAKFHIVDCKG 416
A+ D+ P + A+ IV G
Sbjct: 120 CIYYNQSEWWRSGNGYCLKYRGDKCHVAPKSDRCYAAFSGDVAPALLVLDAEAEIVGPAG 179
Query: 417 NIRTTMAEEFFL--GYRKVDLTSGEILLSIFLPWTRP 451
+R E ++ G + L GE+L ++ +P T
Sbjct: 180 -VRRVPLAELYVEDGAAHLTLEPGEVLAAVRVPPTGG 215
|
This model represents the second largest chain, beta, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA. Length = 321 |
| >gnl|CDD|238126 cd00207, fer2, 2Fe-2S iron-sulfur cluster binding domain | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 4e-07
Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 11/71 (15%)
Query: 37 AHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHC--------AVNACL 88
TLL+ R+ G+ C G CG C V V + V AC
Sbjct: 16 EGETLLDAAREAGID-IPYSCRAGACGTCKVEVVEGEVDQSDPSLLDEEEAEGGYVLACQ 74
Query: 89 APLYSLEGMHV 99
+ +G+ +
Sbjct: 75 TRV--TDGLVI 83
|
Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin. Length = 84 |
| >gnl|CDD|215725 pfam00111, Fer2, 2Fe-2S iron-sulfur cluster binding domain | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 4e-06
Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 9/77 (11%)
Query: 23 LYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMV--------SRYDK 74
+ ++G + TLL+ + G+ C GGCG C V V + +
Sbjct: 1 VTIDGKGVTIEVPDGETTLLDAAEEAGI-DIPYSCRGGGCGTCAVKVLEGEVQSDQSFLE 59
Query: 75 KSKKCVHCAVNACLAPL 91
+ V AC
Sbjct: 60 DDELAAGYVVLACQTYP 76
|
Length = 77 |
| >gnl|CDD|182084 PRK09800, PRK09800, putative hypoxanthine oxidase; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.004
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 84 VNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLR 143
VNA L LE + T E +G L +Q+++V Q G+ P + + LL
Sbjct: 56 VNASLLIAAQLEKADIRTAESLGKWNE-LSLVQQAMVDVGVVQSGYNDPAAALIITDLLD 114
Query: 144 SSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV-FAKTNDALYT 187
PT E+I+++L+G R G++ + A+ N+ T
Sbjct: 115 RI-AAPTREEIDDALSGLFSRDAGWQQYYQVIELAVARKNNPQAT 158
|
Length = 956 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1370 | |||
| TIGR02969 | 1330 | mam_aldehyde_ox aldehyde oxidase. Members of this | 100.0 | |
| PLN02906 | 1319 | xanthine dehydrogenase | 100.0 | |
| KOG0430 | 1257 | consensus Xanthine dehydrogenase [Nucleotide trans | 100.0 | |
| PLN00192 | 1344 | aldehyde oxidase | 100.0 | |
| PRK09800 | 956 | putative hypoxanthine oxidase; Provisional | 100.0 | |
| TIGR03313 | 951 | Se_sel_red_Mo probable selenate reductase, molybde | 100.0 | |
| TIGR03311 | 848 | Se_dep_Molyb_1 selenium-dependent molybdenum hydro | 100.0 | |
| TIGR02965 | 758 | xanthine_xdhB xanthine dehydrogenase, molybdopteri | 100.0 | |
| COG4631 | 781 | XdhB Xanthine dehydrogenase, molybdopterin-binding | 100.0 | |
| TIGR03194 | 746 | 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha | 100.0 | |
| PRK09970 | 759 | xanthine dehydrogenase subunit XdhA; Provisional | 100.0 | |
| TIGR03196 | 768 | pucD xanthine dehydrogenase D subunit. This gene h | 100.0 | |
| TIGR02416 | 770 | CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large | 100.0 | |
| COG1529 | 731 | CoxL Aerobic-type carbon monoxide dehydrogenase, l | 100.0 | |
| COG4630 | 493 | XdhA Xanthine dehydrogenase, iron-sulfur cluster a | 100.0 | |
| TIGR02963 | 467 | xanthine_xdhA xanthine dehydrogenase, small subuni | 100.0 | |
| PF02738 | 547 | Ald_Xan_dh_C2: Molybdopterin-binding domain of ald | 100.0 | |
| PRK09971 | 291 | xanthine dehydrogenase subunit XdhB; Provisional | 100.0 | |
| PRK09908 | 159 | xanthine dehydrogenase subunit XdhC; Provisional | 100.0 | |
| TIGR03193 | 148 | 4hydroxCoAred 4-hydroxybenzoyl-CoA reductase, gamm | 100.0 | |
| TIGR03195 | 321 | 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta s | 100.0 | |
| COG2080 | 156 | CoxS Aerobic-type carbon monoxide dehydrogenase, s | 100.0 | |
| TIGR03199 | 264 | pucC xanthine dehydrogenase C subunit. This gene h | 100.0 | |
| TIGR03198 | 151 | pucE xanthine dehydrogenase E subunit. This gene h | 100.0 | |
| COG1319 | 284 | CoxM Aerobic-type carbon monoxide dehydrogenase, m | 100.0 | |
| PRK11433 | 217 | aldehyde oxidoreductase 2Fe-2S subunit; Provisiona | 100.0 | |
| PRK09799 | 258 | putative oxidoreductase; Provisional | 100.0 | |
| TIGR03312 | 257 | Se_sel_red_FAD probable selenate reductase, FAD-bi | 100.0 | |
| PF00941 | 171 | FAD_binding_5: FAD binding domain in molybdopterin | 100.0 | |
| PF01799 | 75 | Fer2_2: [2Fe-2S] binding domain; InterPro: IPR0028 | 99.96 | |
| PF01315 | 111 | Ald_Xan_dh_C: Aldehyde oxidase and xanthine dehydr | 99.95 | |
| PF03450 | 103 | CO_deh_flav_C: CO dehydrogenase flavoprotein C-ter | 99.73 | |
| COG1529 | 731 | CoxL Aerobic-type carbon monoxide dehydrogenase, l | 99.53 | |
| PRK12386 | 251 | fumarate reductase iron-sulfur subunit; Provisiona | 98.95 | |
| PRK05950 | 232 | sdhB succinate dehydrogenase iron-sulfur subunit; | 98.43 | |
| TIGR00384 | 220 | dhsB succinate dehydrogenase and fumarate reductas | 98.24 | |
| PF13510 | 82 | Fer2_4: 2Fe-2S iron-sulfur cluster binding domain; | 98.18 | |
| PRK12576 | 279 | succinate dehydrogenase iron-sulfur subunit; Provi | 98.16 | |
| PRK12814 | 652 | putative NADPH-dependent glutamate synthase small | 97.93 | |
| cd00207 | 84 | fer2 2Fe-2S iron-sulfur cluster binding domain. Ir | 97.9 | |
| PRK08493 | 819 | NADH dehydrogenase subunit G; Validated | 97.9 | |
| PF13085 | 110 | Fer2_3: 2Fe-2S iron-sulfur cluster binding domain; | 97.86 | |
| PRK12385 | 244 | fumarate reductase iron-sulfur subunit; Provisiona | 97.6 | |
| PRK07569 | 234 | bidirectional hydrogenase complex protein HoxU; Va | 97.57 | |
| PF00111 | 78 | Fer2: 2Fe-2S iron-sulfur cluster binding domain; I | 97.51 | |
| PRK12577 | 329 | succinate dehydrogenase iron-sulfur subunit; Provi | 97.44 | |
| PRK14652 | 302 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 97.1 | |
| PRK12436 | 305 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 97.08 | |
| PRK13552 | 239 | frdB fumarate reductase iron-sulfur subunit; Provi | 97.03 | |
| PRK06259 | 486 | succinate dehydrogenase/fumarate reductase iron-su | 97.0 | |
| PRK13905 | 298 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 96.99 | |
| PRK14653 | 297 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 96.98 | |
| PRK13906 | 307 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 96.98 | |
| PRK07570 | 250 | succinate dehydrogenase/fumarate reductase iron-su | 96.94 | |
| COG0479 | 234 | FrdB Succinate dehydrogenase/fumarate reductase, F | 96.75 | |
| PRK08640 | 249 | sdhB succinate dehydrogenase iron-sulfur subunit; | 96.65 | |
| PRK12575 | 235 | succinate dehydrogenase iron-sulfur subunit; Provi | 96.56 | |
| PRK07860 | 797 | NADH dehydrogenase subunit G; Validated | 96.5 | |
| TIGR00179 | 284 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 96.42 | |
| PLN00129 | 276 | succinate dehydrogenase [ubiquinone] iron-sulfur s | 96.39 | |
| PTZ00305 | 297 | NADH:ubiquinone oxidoreductase; Provisional | 96.29 | |
| PRK14650 | 302 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 96.17 | |
| PRK10713 | 84 | 2Fe-2S ferredoxin YfaE; Provisional | 96.13 | |
| TIGR02008 | 97 | fdx_plant ferredoxin [2Fe-2S]. This model represen | 96.11 | |
| TIGR01973 | 603 | NuoG NADH-quinone oxidoreductase, chain G. This mo | 95.98 | |
| PF01565 | 139 | FAD_binding_4: FAD binding domain This is only a s | 95.96 | |
| CHL00134 | 99 | petF ferredoxin; Validated | 95.95 | |
| PRK09130 | 687 | NADH dehydrogenase subunit G; Validated | 95.81 | |
| PRK09129 | 776 | NADH dehydrogenase subunit G; Validated | 95.76 | |
| COG0277 | 459 | GlcD FAD/FMN-containing dehydrogenases [Energy pro | 95.54 | |
| PLN03136 | 148 | Ferredoxin; Provisional | 95.34 | |
| PRK14649 | 295 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 95.13 | |
| PTZ00038 | 191 | ferredoxin; Provisional | 95.13 | |
| TIGR01676 | 541 | GLDHase galactonolactone dehydrogenase. This model | 95.07 | |
| PRK08166 | 847 | NADH dehydrogenase subunit G; Validated | 94.98 | |
| PRK11872 | 340 | antC anthranilate dioxygenase reductase; Provision | 94.98 | |
| PRK11183 | 564 | D-lactate dehydrogenase; Provisional | 94.91 | |
| TIGR01678 | 438 | FAD_lactone_ox sugar 1,4-lactone oxidases. This mo | 94.73 | |
| PRK00046 | 334 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 94.64 | |
| PLN02465 | 573 | L-galactono-1,4-lactone dehydrogenase | 94.17 | |
| PRK13903 | 363 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 94.08 | |
| PTZ00490 | 143 | Ferredoxin superfamily; Provisional | 94.05 | |
| PRK11230 | 499 | glycolate oxidase subunit GlcD; Provisional | 94.04 | |
| PLN02593 | 117 | adrenodoxin-like ferredoxin protein | 93.97 | |
| TIGR01677 | 557 | pln_FAD_oxido plant-specific FAD-dependent oxidore | 93.9 | |
| TIGR02160 | 352 | PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, | 93.88 | |
| TIGR01679 | 419 | bact_FAD_ox FAD-linked oxidoreductase. This model | 93.83 | |
| TIGR00387 | 413 | glcD glycolate oxidase, subunit GlcD. This protein | 93.61 | |
| PRK10684 | 332 | HCP oxidoreductase, NADH-dependent; Provisional | 93.36 | |
| COG0633 | 102 | Fdx Ferredoxin [Energy production and conversion] | 92.96 | |
| PRK14651 | 273 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 92.95 | |
| PRK07609 | 339 | CDP-6-deoxy-delta-3,4-glucoseen reductase; Validat | 92.92 | |
| TIGR02007 | 110 | fdx_isc ferredoxin, 2Fe-2S type, ISC system. This | 92.91 | |
| COG0812 | 291 | MurB UDP-N-acetylmuramate dehydrogenase [Cell enve | 92.81 | |
| PRK14648 | 354 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 92.64 | |
| PRK05713 | 312 | hypothetical protein; Provisional | 92.01 | |
| PRK05464 | 409 | Na(+)-translocating NADH-quinone reductase subunit | 91.75 | |
| PLN02805 | 555 | D-lactate dehydrogenase [cytochrome] | 91.6 | |
| TIGR01941 | 405 | nqrF NADH:ubiquinone oxidoreductase, Na(+)-translo | 91.14 | |
| COG3383 | 978 | Uncharacterized anaerobic dehydrogenase [General f | 90.02 | |
| COG1034 | 693 | NuoG NADH dehydrogenase/NADH:ubiquinone oxidoreduc | 89.49 | |
| PRK09970 | 759 | xanthine dehydrogenase subunit XdhA; Provisional | 88.95 | |
| PRK11282 | 352 | glcE glycolate oxidase FAD binding subunit; Provis | 87.96 | |
| TIGR03194 | 746 | 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha | 86.83 | |
| KOG2282 | 708 | consensus NADH-ubiquinone oxidoreductase, NDUFS1/7 | 86.27 | |
| TIGR03313 | 951 | Se_sel_red_Mo probable selenate reductase, molybde | 86.16 | |
| TIGR03311 | 848 | Se_dep_Molyb_1 selenium-dependent molybdenum hydro | 85.71 | |
| PRK13904 | 257 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 84.85 | |
| PLN02441 | 525 | cytokinin dehydrogenase | 84.46 | |
| TIGR03196 | 768 | pucD xanthine dehydrogenase D subunit. This gene h | 83.01 | |
| PLN02906 | 1319 | xanthine dehydrogenase | 80.22 |
| >TIGR02969 mam_aldehyde_ox aldehyde oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-272 Score=2661.06 Aligned_cols=1308 Identities=42% Similarity=0.726 Sum_probs=1184.8
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcE
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMH 98 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 98 (1370)
.|+|+|||+++++.+++|+++||+|||++ ||||||.||++|+||||||+||++|+.+|++.+++|||||+|+++++|++
T Consensus 2 ~~~~~~Ng~~~~~~~~~~~~~ll~~LR~~~~l~gtk~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 81 (1330)
T TIGR02969 2 ELLFYVNGRKVVEKNVDPETMLLPYLRKKLRLTGTKYGCGGGGCGACTVMISRYNPSTKSIRHHPVNACLTPICSLYGAA 81 (1330)
T ss_pred cEEEEECCEEEEeccCCCCCcHHHHHHhhcCCCCCCCCcCCCCCCCcEEEECCccccccccCCcEEehhHHHHHHhCCCE
Confidence 48899999998665699999999999996 99999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHHH
Q 000657 99 VITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVF 178 (1370)
Q Consensus 99 i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~ 178 (1370)
|+|||||++..+.|||||+||+++|++|||||||||||++++||++++.| +++||+++|+|||||||||++|++|++++
T Consensus 82 v~TvEgl~~~~~~l~pvq~a~~~~~~~QCGfCtpG~vm~~~~ll~~~~~p-~~~~i~~~l~gnlCRCtgY~~i~~a~~~~ 160 (1330)
T TIGR02969 82 VTTVEGIGSTRTRLHPVQERIAKCHGTQCGFCTPGMVMSMYALLRNHPEP-TLDQLTDALGGNLCRCTGYRPIIDACKTF 160 (1330)
T ss_pred EEecCCcCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHHcCCCC-CHHHHHHHhcCCcccCCCCHHHHHHHHHH
Confidence 99999998435689999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HhcccccccccCcccccCC-ccccCCCC--CCCCCCCCCCCCCcccccccccCCcccccccccCCCCCCCCC-CCCCChh
Q 000657 179 AKTNDALYTNMSSMSLKEG-EFVCPSTG--KPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEK-ELIFPPE 254 (1370)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~-~~~c~~~~--~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~ 254 (1370)
+.+.. |. .+++ ..||+.+. +.++|... + .....+++.+++.+|++. +++||++
T Consensus 161 ~~~~~--~~------~~~~~~~~c~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~~~~~~~~fp~~ 217 (1330)
T TIGR02969 161 CKTSG--CC------QSKENGVCCLDQGINGLPEFEEG----D-----------ETSPELFSEEEFLPLDPTQELIFPPE 217 (1330)
T ss_pred hhccC--Cc------hhccccCcccccccccccccccc----c-----------cccccccchhcccCCCccccccCChh
Confidence 86521 11 1111 12454110 00011000 0 000125666788889987 9999999
Q ss_pred hhcc-C--CCC-ccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeec
Q 000657 255 LLLR-K--SNP-LNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVK 330 (1370)
Q Consensus 255 l~~~-~--~~~-~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~ 330 (1370)
|+.. + ..+ +.+.+ ++.+|++|+||+||+++|+++|++++|||||||+++++++...++.+|||++|+||+.|+.+
T Consensus 218 l~~~~~~~~~~~~~~~~-~~~~~~~P~tl~ea~~ll~~~~~a~lvAGGTdl~~~~k~~~~~~~~lIdi~~I~EL~~i~~~ 296 (1330)
T TIGR02969 218 LMRMAEKQPQRTRVFYS-ERMMWISPVTLKELLEAKFKYPQAPVVMGNTSVGPEVKFKGVFHPVIISPDRIEELSVVNHT 296 (1330)
T ss_pred HhhcccccccceeeecC-CCceEECCCCHHHHHHHHHhCCCCEEEecCcchHHHhhhccCCCCeEEECCCChhhhcEEEc
Confidence 8854 1 223 55554 55799999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEE
Q 000657 331 DDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFH 410 (1370)
Q Consensus 331 ~~~l~IGA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~ 410 (1370)
+++|+|||+|||++|+++|.+.+.+++....+.|+.|++++++|||+||||+||||||||||||+||++|+|+||||+|+
T Consensus 297 ~~~l~IGA~vT~~el~~~l~~~i~~~p~~~~~~~p~L~~a~~~ias~qIRN~gTlGGNi~~asP~sD~~p~LlAl~A~v~ 376 (1330)
T TIGR02969 297 GDGLTLGAGLSLAQVKDILADVVQKLPEETTQTYRALLKHLGTLAGSQIRNMASLGGHIISRHLDSDLNPLLAVGNCTLN 376 (1330)
T ss_pred CCEEEEeccccHHHHHHHHHHhhhcCchhhhHHHHHHHHHHHHhCChhhcccccchhhcccCCCchhHHHHHHHcCcEEE
Confidence 99999999999999999998888777766667899999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCeEEEehhHhh-cccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEe-cCCcceEE
Q 000657 411 IVDCKGNIRTTMAEEFF-LGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLE-EKDEEWVV 488 (1370)
Q Consensus 411 i~s~~g~~R~vpl~dF~-~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~-~~~~~~~i 488 (1370)
|.+.+| +|+||++||| .+|++++|+|+|||++|+||.+..+.++++||+++|+++|||+||+||+++++ +++ +|
T Consensus 377 l~s~~g-~R~vpl~dff~~~~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v~l~~~~~---~i 452 (1330)
T TIGR02969 377 LLSKEG-KRQIPLSEQFLSKCPDADLKPQEILVSVNIPYSRKWEFVSAFRQAQRQQNALAIVNSGMRVFFGEGDG---II 452 (1330)
T ss_pred EecCCc-eEEEehHHhhhcccccccCCCCceEEEEEecCCCCccceeEEEEcCCccccHHHhhheEEEEEEcCCC---EE
Confidence 999999 9999999988 68999999999999999999876667888999999999999999999999996 455 99
Q ss_pred EEEEEEEccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhhccC
Q 000657 489 SDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEG 568 (1370)
Q Consensus 489 ~~~rIa~Ggva~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~~~~ 568 (1370)
+++||+||||+|+|+|++++|++|.||+|+++++++|.+++.+++.|+.+++|+|++||++|+.+||+|||+++..++..
T Consensus 453 ~~aria~Ggvap~p~ra~~~E~~L~Gk~~~~~~~~~A~~~l~~~~~p~~~d~r~sa~YRr~la~~ll~kf~~~~~~~~~~ 532 (1330)
T TIGR02969 453 RELSISYGGVGPTTICAKNSCQKLIGRPWNEEMLDTACRLILDEVSLAGSAPGGKVEFKRTLIISFLFKFYLEVSQILKR 532 (1330)
T ss_pred eEEEEEEEcCcCceecHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999999999999999999999999988888889999999999999999999999987742
Q ss_pred -CCCcccCCCcccccccccccCCCccccccccccC--CC--CccCCcccccCccccccceeeccccCCCCCCcEEEEEEe
Q 000657 569 -KNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITK--HG--TSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVL 643 (1370)
Q Consensus 569 -~~~~~~~~~~~~~s~~~~~~r~~~~g~q~~~~~~--~~--~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vr 643 (1370)
.....+.+++.+.|+.+.++||+++|.|.|+... +. ++|||+++|+|++.||||+++|++|++.+|||||+++||
T Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGk~v~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vr 612 (1330)
T TIGR02969 533 MDPGHYPSLADKYESALEDLHSKHHWSTLKHQNVDSMQLPQDPIGHPIMHLSGVKHATGEAIYCDDMPAVDQELFLTFVT 612 (1330)
T ss_pred ccccccccCChhhccccccccCCCCccccceecccccccccCcCCCCCcChhhHhhccccccccCCCCCCCCCEEEEEEe
Confidence 1112234677888999999999999999998422 22 789999999999999999999999998448999999999
Q ss_pred cCCCCceEeeecchhccCCCCEEEEEecCCCCCCCCCCCCCccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeE
Q 000657 644 SRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVE 723 (1370)
Q Consensus 644 Sp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~g~~~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ 723 (1370)
||++||||++||+|+|++||||++|+|++|+|+.|.++ ++++|++++|||+|||||+|||+|+++|++|+++|+|+
T Consensus 613 Sp~ahArI~sID~s~A~~~pGV~~V~t~~Dvp~~~~~~----~~~~la~~~Vr~~Gqpva~VvAet~~~A~~Aa~~V~Ve 688 (1330)
T TIGR02969 613 SSRAHAKIVSIDLSEALSLPGVVDIITAEHLQDANTFG----TEKLLATDKVHCVGQLVCAVIADSEVQAKQAAKHVKIV 688 (1330)
T ss_pred cCCCceEEEeeeHHHHhcCCCeEEEEeHHHCCCCCCCC----CeeecCCCeEEEcCCeEEEEEECCHHHHHHHhcCCEEE
Confidence 99999999999999999999999999999998655443 78999999999999999999999999999999999999
Q ss_pred Eeec-CcCCCHHHHHhccCCCCCCccccccCCcccccccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEe
Q 000657 724 YEEL-PAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMIS 802 (1370)
Q Consensus 724 ye~l-p~v~~~~~A~~~~a~~~~~~~~~~~Gdv~~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~ 802 (1370)
||+| |+++|+++|+++++++. ....+.+||++++| ++|+++||++|++++|+|+||||++|+|+|+.++|+|+||+
T Consensus 689 Ye~l~~~v~d~~~Al~~~a~~~-~~~~~~~Gdv~~af--~~a~~vve~~y~~~~~~H~~mEp~~~~A~~~~~~g~l~V~~ 765 (1330)
T TIGR02969 689 YRDLEPLILTIEEAIQHKSFFE-PERKLEYGNVDEAF--KVVDQILEGEIHMGGQEHFYMETQSMLVVPKGEDQEMDVYV 765 (1330)
T ss_pred EecCCCCcCCHHHHhcCCCEec-ccccccCCchhhhh--ccCCEEEEEEEEECCEeecccCCCEEEEEEeCCCCeEEEEE
Confidence 9999 56799999999887554 33456899999999 99999999999999999999999999999974457899999
Q ss_pred CCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEE
Q 000657 803 STQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLG 882 (1370)
Q Consensus 803 stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~ 882 (1370)
|||+|+.+|..||++||||++||||+.+++|||||+|.+....+++.||++|+++||||||+|||+|+|+.+++||++.+
T Consensus 766 stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aA~aA~~~gRPVk~~~sR~e~~~~~~~R~~~~~ 845 (1330)
T TIGR02969 766 STQFPKYIQDIVAATLKLPVNKVMCHVRRVGGAFGGKVGKTSIMAAITAFAANKHGRAVRCTLERGEDMLITGGRHPYLG 845 (1330)
T ss_pred CCcCHHHHHHHHHHHhCCCHHHeEEEeCCcccCcccccccccHHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCcCceEE
Confidence 99999999999999999999999999999999999999854345689999999999999999999999999999999999
Q ss_pred EEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHH
Q 000657 883 KYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITE 962 (1370)
Q Consensus 883 ~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E 962 (1370)
+||+|+++||+|+|++++++.|+|+|.+.+..++.++..+..++|+|||++++++.|+||+||+|+|||||.+|++|++|
T Consensus 846 ~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~RG~G~~q~~fa~E 925 (1330)
T TIGR02969 846 KYKAGFMNDGRIVALDVEHYSNGGSSLDESLWVIEMGLLKMDNAYKFPNLRCRGWACRTNLPSNTAFRGFGFPQAGLITE 925 (1330)
T ss_pred EEEEEECCCCCEEEEEEEEEEecccccCcchHHHHHHHHhcCCCccCCcEEEEEEEEECCCCCCCccCCCchHHHHHHHH
Confidence 99999999999999999999999999988877778788889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHhcCCCCCccccCccccCCCHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeee
Q 000657 963 NWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTK 1042 (1370)
Q Consensus 963 ~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~ 1042 (1370)
++||++|++|||||+|||++|++++|+.+++++.++++.+++||+++++.++|++|++.++.||+.++|++||+++++..
T Consensus 926 ~~mD~lA~~lg~DP~e~R~~N~~~~gd~~p~~~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGiG~a~~~ 1005 (1330)
T TIGR02969 926 ACITEVAAKCGLSPEKVRTINMYKEIDQTPYKQEINAKNLFQCWRECMAKSSYSERKVAVEKFNAENYWKKRGLAVIPLK 1005 (1330)
T ss_pred HHHHHHHHHHCcCHHHHHHHhCCCCcccCCCCcccCCCcHHHHHHHHHHhcCHHHHHHHHHHHhccCCCeEEEEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999998888778888889999999999999
Q ss_pred eccccccccCCceeEEEEEecCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhh
Q 000657 1043 FGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSD 1122 (1370)
Q Consensus 1043 ~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~ 1122 (1370)
|++++.....+++++.|+|+.||+|+|.+|++|||||++|+++|||||+||||+|+|+|..+||+.+|++++|+|||+|+
T Consensus 1006 ~~~~~~~~~~~~~~a~v~i~~DGsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~gSr~t~ 1085 (1330)
T TIGR02969 1006 FPVGLGSVAMGQAAALVHIYLDGSVLVTHGGIEMGQGVHTKMIQVVSRELKMPMSNVHLRGTSTETVPNTNASGGSVVAD 1085 (1330)
T ss_pred eccccccCCCCCccEEEEEcCCceEEEEECCcCcCCChHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCCCCCCchHHHHH
Confidence 98877544456789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEe
Q 000657 1123 IYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEI 1202 (1370)
Q Consensus 1123 ~~g~Av~~Ac~~L~~rl~~~a~~~~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeV 1202 (1370)
++|+||++||++|++||+++++.++..+|.+++..++..+++|.+.++|..+...+++....+.++.||+||+|++||||
T Consensus 1086 ~~G~Av~~A~~~l~~rl~~~aa~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVEV 1165 (1330)
T TIGR02969 1086 LNGLAVKDACQTLLKRLEPIISKNPQGTWKDWAQTAFDQSISLSAVGYFRGYESNINWEKGEGHPFEYFVYGAACSEVEI 1165 (1330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHhhccCCCceEEEEEecCCcccccccCcCCCCccccceeeEEEEEEE
Confidence 99999999999999999999988878899999876776678899999886655555565444456668999999999999
Q ss_pred eCCCCcEEEEEEEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCC
Q 000657 1203 DTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPL 1282 (1370)
Q Consensus 1203 D~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~ 1282 (1370)
|++||+++|+|+++++|||++|||.+++||||||++|||||+|+|++.||+ +|+++|++|++|+||++.|||.
T Consensus 1166 D~~TG~v~vlr~~~v~D~G~~INP~~~~GQieGg~vqGiG~al~Ee~~yd~-------~G~~lt~~~~dY~iPt~~DiP~ 1238 (1330)
T TIGR02969 1166 DCLTGDHKNIRTDIVMDVGHSINPALDIGQVEGAFIQGMGLYTIEELSYSP-------QGILYSRGPNQYKIPAICDIPT 1238 (1330)
T ss_pred ecCCCCEEEEEEEEEEeCCcccCHHHHhHhHHHHHHHHHHHHHcceeEECC-------CCCCCCCCcccccCCchhhcCC
Confidence 999999999999999999999999999999999999999999999999998 8999999999999999999995
Q ss_pred eeEEEEeecCCCCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcccccccccC-
Q 000657 1283 KFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPFIN- 1361 (1370)
Q Consensus 1283 ~~~v~~~~~~~~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~~~~~~~~~~- 1361 (1370)
+|+|.++++.+++.+|||+||+||+|+++++++++||+|||++|+++.|++++|++++|+|||+||++|.+++++.+.+
T Consensus 1239 ~~~v~~~~~~~~~~~p~GaKGvGE~~~~~a~~v~~AI~nAI~~A~g~~g~~~~~~~~~P~Tperv~~al~~~~~~~~~~~ 1318 (1330)
T TIGR02969 1239 ELHISFLPPSEHSNTLYSSKGLGESGVFLGCSVFFAIHDAVRAARQERGLSGPWKLTSPLTPEKIRMACEDKFTKMIPRD 1318 (1330)
T ss_pred CEEEEEEeCCCCCCCCCccccCcccccccCccHHHHHHHHHHHHHhhcCCCcCccCCCCCCHHHHHHHhhhhHHHhhhcc
Confidence 5999999754788999999999999999877899999999999998888877889999999999999999999887544
Q ss_pred -CCCCCCCCC
Q 000657 1362 -SEYRPKLSV 1370 (1370)
Q Consensus 1362 -~~~~~~~~~ 1370 (1370)
+.+...|++
T Consensus 1319 ~~~~~~~~~~ 1328 (1330)
T TIGR02969 1319 EPGSYVPWNV 1328 (1330)
T ss_pred CccCCcccee
Confidence 444445654
|
Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase. |
| >PLN02906 xanthine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-272 Score=2660.40 Aligned_cols=1304 Identities=80% Similarity=1.308 Sum_probs=1189.3
Q ss_pred CCcHHHHHhhCCCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEeccccCCCCCCCHHHH
Q 000657 38 HLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQE 117 (1370)
Q Consensus 38 ~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEgl~~~~~~~~~iq~ 117 (1370)
+++||+|||+.||||||.||++|+||||||+||++|+.+|+++|++|||||+|+++++|++|+|||||++..+.|||||+
T Consensus 1 ~~~ll~~LR~~~l~g~k~gC~~g~CGaCtv~~~~~~~~~~~~~~~~v~sC~~~~~~~~g~~i~Tvegl~~~~~~~~~vq~ 80 (1319)
T PLN02906 1 HQTLLEYLRDLGLTGTKLGCGEGGCGACTVMVSHYDRKTGKCVHYAVNACLAPLYSVEGMHVITVEGIGNRRDGLHPVQE 80 (1319)
T ss_pred CCcHHHHHHhCCCCCCCCCcCCCCCCCeEEEECCccccCCccCCeEehhhHHHHHHhCCCEEEecCCCCCCCCCCCHHHH
Confidence 47999999988999999999999999999999999988899999999999999999999999999999854578999999
Q ss_pred HHHHcCCCCCCCCChHHHHHHHHHHHcCC-CCCCHHHHHHHhcCcccccCCChhHHHHHHHHHhcccc----cccccCcc
Q 000657 118 SLVRSHGSQCGFCTPGFIMSMYSLLRSSQ-TPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDA----LYTNMSSM 192 (1370)
Q Consensus 118 a~~~~~~~qCG~CtpG~v~~~~~ll~~~~-~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~~~~----~~~~~~~~ 192 (1370)
||+++|++|||||||||||++++||++++ .| +++||+++|+|||||||||++|++|+++++.+.+. .|. .
T Consensus 81 a~~~~~~~QCG~CtpG~vm~~~~ll~~~~~~~-~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~~~~~~~~~~~----~ 155 (1319)
T PLN02906 81 ALASMHGSQCGFCTPGFIMSMYALLRSSKTPP-TEEQIEECLAGNLCRCTGYRPILDAFRVFAKTDDALYTGVSS----L 155 (1319)
T ss_pred HHHHcCCCcCCCCchHHHHHHHHHHHhCCCCC-CHHHHHHHhcCCcccCCCCHHHHHHHHHHHhcccccCCcccc----h
Confidence 99999999999999999999999999984 67 99999999999999999999999999999976321 111 0
Q ss_pred cccCCccccCCCCCCCCCCCCCCCCCcccccccccCCccccccccc----CCCCCCCCC-CCCCChhhhccCCCCccccC
Q 000657 193 SLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSE----IDGSTYTEK-ELIFPPELLLRKSNPLNLSG 267 (1370)
Q Consensus 193 ~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~p~~l~~~~~~~~~~~~ 267 (1370)
+++++..||++++..+.|....++. .+.+. ..+|++ ++|.+|+|. |++||++|+.....++.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~ 225 (1319)
T PLN02906 156 SLQDGEPICPSTGKPCSCGSKTTSA---------AGTCK-SDRFQPISYSEIDGSWYTEKELIFPPELLLRKLTPLKLLG 225 (1319)
T ss_pred hhhhccccccccCcccccccccccc---------ccccc-ccccccccccccccccCccccccCCHHHhhCCCcceeecC
Confidence 2233334564332111121000000 00000 013333 678899998 99999999755455566643
Q ss_pred CCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHH
Q 000657 268 FGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLK 347 (1370)
Q Consensus 268 ~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~ 347 (1370)
.++++||+|+||+||+++|+++|++++|||||||+++++++...|+++|||++|+||+.|+.++++|+|||+|||++|++
T Consensus 226 ~~~~~~~~P~tl~ea~~ll~~~~~a~ivAGGTdl~~~~~~~~~~~~~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~el~~ 305 (1319)
T PLN02906 226 NGGLTWYRPTSLQHLLELKAEYPDAKLVVGNTEVGIEMRFKNAQYPVLISPTHVPELNAIKVKDDGLEIGAAVRLSELQN 305 (1319)
T ss_pred CCCceEECcCCHHHHHHHHHhCCCCEEEEcCchhHHHhhhccCCCCeEEECCCChhhhcEEecCCEEEEecCCcHHHHHH
Confidence 24789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhh
Q 000657 348 MFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFF 427 (1370)
Q Consensus 348 ~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~ 427 (1370)
+|.+.+.+.+..+...++.|++++++|||+||||+|||||||++++|+||++|+|+||||+|+|.+.+|++|+||++|||
T Consensus 306 ~l~~~i~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~asP~sD~~p~LlAl~A~v~l~s~~g~~R~vpl~dFf 385 (1319)
T PLN02906 306 LFRKVVKERPAHETSACKAFIEQLKWFAGTQIRNVASIGGNICTASPISDLNPLWMAAGATFVIISCDGDIRSVPASDFF 385 (1319)
T ss_pred HHHHHhhhcchhhhHHHHHHHHHHHHhCCHhhcCceechhhhccCCCchhHHHHHHHcCcEEEEEcCCCCeEEEEHHHhc
Confidence 99888876665667789999999999999999999999999999999999999999999999999998658999999999
Q ss_pred cccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHH
Q 000657 428 LGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKK 507 (1370)
Q Consensus 428 ~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~ 507 (1370)
+||+++.|+|+|||++|+||.+.++.++++||+++|+++|||+||+||+++++++++.++|+++||+||||+|+|+|+++
T Consensus 386 ~g~~kt~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v~l~~~~~~~~i~~aria~Ggva~~p~ra~~ 465 (1319)
T PLN02906 386 LGYRKVDLKPDEILLSVFLPWTRPFEYVKEFKQAHRRDDDIAIVNAGMRVKLEEKDGEWIVSDASIAYGGVAPLSVSARK 465 (1319)
T ss_pred CccccccCCCCceEEEEEccCCCCCccEEEEEEcCccccchhheeeEEEEEEecCCCCceEeEEEEEEeccCCceecHHH
Confidence 99999999999999999999877778899999999999999999999999997411112799999999999999999999
Q ss_pred HHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhhccCCCCcccCCCcccccccccc
Q 000657 508 TKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSF 587 (1370)
Q Consensus 508 ~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 587 (1370)
+|++|.||+|+++++++|.+++.+++.+.++.+++|++||++|+.+||+|||+++.+++....+..+.+++.+.|+.+.+
T Consensus 466 ~E~~L~G~~~~~~~i~~A~~~l~~~~~p~~d~~~~sa~YR~~la~~ll~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (1319)
T PLN02906 466 TEEFLIGKPWNKETLQDALKVLQKDILIKEDAPGGMVEFRKSLALSFFFKFFLWVSHQLEADGSTIETFPESHLSAAQPF 545 (1319)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHhccCCCcCCCCCCHHHHHHHHHHHHHHHHHHHhhhccccccccccCChhhccccccc
Confidence 99999999999999999999999999988887789999999999999999999999887421112335788999999999
Q ss_pred cCCCccccccccccCCCCccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEE
Q 000657 588 HRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVG 667 (1370)
Q Consensus 588 ~r~~~~g~q~~~~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~ 667 (1370)
+||+|+|.|.|+.++++++|||+++|+|+..||||+++|++|++++|||||+++||||++||+|++||+|+|++||||++
T Consensus 546 ~~~~~~~~q~~~~~~~~~~vGk~~~r~d~~~kvtG~a~Y~~Di~~~~g~L~a~~vrSp~aharI~sID~s~A~~~pGV~~ 625 (1319)
T PLN02906 546 PRPSSVGMQDYETVKQGTAVGQPEVHLSAELQVTGEAEYADDIPMPPNTLHAALVLSTKPHARILSIDDSEAKSSPGFAG 625 (1319)
T ss_pred cCCCCccceecccccccccCCCCccCcchhhhcceeEEeccCCcCCCCCEEEEEEecCcCceEEeecchHHHhCCCCeEE
Confidence 99999999999977889999999999999999999999999999767999999999999999999999999999999999
Q ss_pred EEecCCCCCCCCCCCCCccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccCCCCCCc
Q 000657 668 IFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTE 747 (1370)
Q Consensus 668 Vvt~~Dipg~n~~g~~~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a~~~~~~ 747 (1370)
|+|++|+|+.|.+|....|+|+|++++|+|+|||||+|||+|+++|++|+++|+|+||+||+++|+++|++++++|+...
T Consensus 626 v~t~~Dip~~~~~g~~~~~~~~la~~~V~y~GqpVa~VvA~t~~~A~~Aa~~V~Veye~lp~v~~~~~Al~~~a~~~~~~ 705 (1319)
T PLN02906 626 IFLAKDVPGDNMIGPVVHDEELFATDVVTCVGQVIGVVVADTQENAKAAARKVKVEYEELPAILSIEEAIEAGSFHPNTE 705 (1319)
T ss_pred EEchhhCCCCCCCCCCCCCeeEecCcEEEEcCCeEEEEEECCHHHHHHHhCCCEEEEecCCccCCHHHHhcCCCcccCCC
Confidence 99999999777777777899999999999999999999999999999999999999999999999999999988775333
Q ss_pred cccccCCcccccccCC--CccEEEEEEEECcccccCCCCCeEEEEEecCC-CeEEEEeCCCChHHHHHHHHHHhCCCCCc
Q 000657 748 RCFRKGDVDICFQSGQ--CDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHG-NEVHMISSTQAPQKHQKYVSHVLGLPMSK 824 (1370)
Q Consensus 748 ~~~~~Gdv~~af~~~~--a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~-g~l~V~~stQ~p~~~r~~vA~~Lglp~~k 824 (1370)
..+.+||++++| ++ |++|||++|++++|+|+||||++|+|+|+ ++ |+|+||+|||+|+.+|..||++||||++|
T Consensus 706 ~~~~~Gdv~~af--~~a~a~~vve~~~~~~~~~H~~mEp~~~~A~~~-~~~g~l~v~~sTQ~p~~~r~~vA~~Lgip~~k 782 (1319)
T PLN02906 706 RRLEKGDVELCF--ASGQCDRIIEGEVQMGGQEHFYLEPNSSLVWTS-DSGNEVHMISSTQAPQKHQKYVAHVLGLPMSK 782 (1319)
T ss_pred ceeecCCHHHHh--hccCCceEEEEEEEECCccccccCCCeEEEEEe-CCCCEEEEEECCcCHHHHHHHHHHHhCCChHH
Confidence 456899999999 87 79999999999999999999999999998 45 68999999999999999999999999999
Q ss_pred EEEEecccCCCCCCCCccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEec
Q 000657 825 VVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNN 904 (1370)
Q Consensus 825 VrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d 904 (1370)
|||+.+++|||||+|.+....++++||++|+++||||||+|||+|+|+.+++||++.++||+|+++||+|+|++++++.|
T Consensus 783 VrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sReE~~~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d 862 (1319)
T PLN02906 783 VVCKTKRIGGGFGGKETRSAFIAAAAAVPAYLLNRPVKLTLDRDVDMMITGQRHAFLGKYKVGFTNEGKILALDLEIYNN 862 (1319)
T ss_pred eEEEeCCcccCccccccccchHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCccceEEEEEEEECCCCCEEEEEEEEEec
Confidence 99999999999999998655567889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhc
Q 000657 905 AGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINF 984 (1370)
Q Consensus 905 ~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl 984 (1370)
+|+|.+++..++.+++.++.++|+|||++++++.|+||+||+|+|||||.+|++|++|++||++|++|||||+|||++|+
T Consensus 863 ~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lG~DP~e~R~~Nl 942 (1319)
T PLN02906 863 GGNSLDLSGAVLERAMFHSDNVYEIPNVRIVGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRIAVELNKSPEEIREMNF 942 (1319)
T ss_pred CcccCCcchHHHHHHHHhcCCCccCcceEEEEEEEECCCCCCCcccCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhC
Confidence 99999888888888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCccccCCCHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEEEEEecC
Q 000657 985 QGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTD 1064 (1370)
Q Consensus 985 ~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~l~~D 1064 (1370)
+++|+.+++|+.++++.+++||+++++.++|++|++.+++||+.|+|+|||+++++.+||.++...+.+++.+.|+|++|
T Consensus 943 ~~~g~~~~~g~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~krGiG~a~~~~g~~~~~~~~~~~~a~V~i~~D 1022 (1319)
T PLN02906 943 QGEGSVTHYGQVLQHCTLPQLWDELKVSCDFLKRREEVDEFNAKNRWKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTD 1022 (1319)
T ss_pred CCCCCCCcCCccccCCCHHHHHHHHHHhCCHHHHHHHHHHHhhcCCCceEEEEEEecccccccccccCCccceEEEEcCC
Confidence 99999999999999999999999999999999988888889988999999999999999887754445678899999999
Q ss_pred CcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhh
Q 000657 1065 GTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIAS 1144 (1370)
Q Consensus 1065 GsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~ 1144 (1370)
|+|+|.+|++|||||++|+++|||||+||||+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||+++++
T Consensus 1023 GsV~V~~G~~e~GQG~~T~~aQiaAe~LGip~d~V~v~~~DT~~~p~~~gT~aSr~t~~~G~Av~~Aa~~l~~rl~~~a~ 1102 (1319)
T PLN02906 1023 GTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFISETSTDKVPNASPTAASASSDMYGAAVLDACEQIKARMEPVAS 1102 (1319)
T ss_pred ceEEEEECCccCCCChHHHHHHHHHHHHCCCHHHEEEEccCCCCCCCCCCCccchhhHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hCCCCCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEEEEEEEEecCccc
Q 000657 1145 KHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSL 1224 (1370)
Q Consensus 1145 ~~~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~~~D~G~~i 1224 (1370)
+++..+|++++..+|..+.+|.++++|..|...++|.++.+.++.||+||+|++|||||++||+++|+|+++++|||++|
T Consensus 1103 ~~~~~~~~~l~~~~~~~~~~l~a~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~vlr~~~v~D~G~~i 1182 (1319)
T PLN02906 1103 KLNFSSFAELVTACYFQRIDLSAHGFYITPDIGFDWKTGKGNPFNYFTYGAAFAEVEIDTLTGDFHTRRVDIVMDLGYSI 1182 (1319)
T ss_pred HcCCCCHHHHHHHhhccCCCeEEEEEecCCCcccccccccCCCccceeeeEEEEEEEEecCCCcEEEEEEEEEEecCccC
Confidence 88889999999988876778999999987755566766667777789999999999999999999999999999999999
Q ss_pred CcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeecCCCCCCCCCCCcC
Q 000657 1225 NPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAV 1304 (1370)
Q Consensus 1225 NP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~~~~~p~gaKGv 1304 (1370)
||.+++|||||||+||||++|+|++.||++.|+|..+|+++|++|++|+||++.|||.+|+|.+++..++|.+|||+||+
T Consensus 1183 NP~~~~GQieGg~vqGiG~aL~Ee~~~d~~~~~~~~~G~llt~~~~~Y~iPt~~DiP~~~~v~~~~~~~~~~~p~gaKGv 1262 (1319)
T PLN02906 1183 NPAIDIGQIEGAFVQGLGWVALEELKWGDAAHKWIRPGSLFTCGPGTYKIPSVNDIPFKFNVSLLKGAPNPKAIHSSKAV 1262 (1319)
T ss_pred CHHHHhHhhHHHHHHHHHHHhcCceEEcccccccCCCCccccCCCcccCCCCccccCCceEEEEEeCCCCCCCCCcCccC
Confidence 99999999999999999999999999997546788889999999999999999999955999999633899999999999
Q ss_pred CCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcccccccc
Q 000657 1305 GEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAPF 1359 (1370)
Q Consensus 1305 GE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~~~~~~~~ 1359 (1370)
||+|++++++|++||+|||++||++.|+..+|++++|+|||+|+++|.+++++.+
T Consensus 1263 GE~~~~~~aav~~AI~~Ai~~A~~~~g~~~~~~~~~P~Tperi~~a~~~~~~~~~ 1317 (1319)
T PLN02906 1263 GEPPFFLAASVFFAIKDAIKAARAEVGLHGWFPLDTPATPERIRMACGDEITAPF 1317 (1319)
T ss_pred CccccccchHHHHHHHHHHHHHHhhcCCCCcccCCCCCCHHHHHHHccchhhhhh
Confidence 9999999889999999999999988888777899999999999999999987764
|
|
| >KOG0430 consensus Xanthine dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-266 Score=2387.23 Aligned_cols=1242 Identities=56% Similarity=0.908 Sum_probs=1155.4
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 97 (1370)
|.+.|.|||++++++++||++||++|||+. +|||||.||+||+||||||+|.+||+.+ ++++.+|||||+|+++++|+
T Consensus 1 ~~l~F~VNG~~~~~~~vdP~~TL~~fLR~k~~ltgtKlgC~EGGCGaCtv~ls~~dp~~-~~~~~avNsCLt~l~s~~g~ 79 (1257)
T KOG0430|consen 1 MELVFAINGKRVEVELLPPDLTLNTFLREKLGLTGTKLGCGEGGCGACTVVLSKYDPEL-KVRHWAVNSCLTLLNSVHGL 79 (1257)
T ss_pred CceEEEECCEEeeEecCCcchhHHHHHHHhcCCcceeeccCCCCccceEEEEeccCCCc-eeEEeehhhhhhhcccccce
Confidence 468899999999999999999999999996 9999999999999999999999999999 99999999999999999999
Q ss_pred EEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCC-CCCCHHHHHHHhcCcccccCCChhHHHHHH
Q 000657 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQ-TPPTEEQIEESLAGNLCRCTGYRPIVDAFR 176 (1370)
Q Consensus 98 ~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~-~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~ 176 (1370)
+|||+||||+++.++||||++|+..||+|||||||||||+||+||++.+ .| |.+||+++|+||||||||||||+||++
T Consensus 80 ~VtT~EGlGn~~~g~HPiq~RlA~~hgsQCGFCtPG~vmsmYalL~n~~~~~-T~~eie~a~~GNLCRCTGYRPIldA~k 158 (1257)
T KOG0430|consen 80 EVTTSEGLGNRRDGYHPIQERLAKMHGSQCGFCTPGFVMSMYALLRNSKNSP-TMEEIENAFGGNLCRCTGYRPILDAMK 158 (1257)
T ss_pred EEEeeecccccccCcCcHHHHHhhccCCcccCCCccHHHHHHHHHHhCCCCC-CHHHHHHhhccceeeecCCchHHHHHh
Confidence 9999999998889999999999999999999999999999999999988 67 999999999999999999999999999
Q ss_pred HHHhcccccccccCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCcccccccccCCCCCCCCC-CCCCChhh
Q 000657 177 VFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEK-ELIFPPEL 255 (1370)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~l 255 (1370)
+||.+.+ ||... ....|.+ + ...++..+ ++|||+ +++|||+|
T Consensus 159 SFa~d~~----------------~~~~g-~~~~~~~-----~--------------~~~~~~~~-~~~dp~~~~i~~pe~ 201 (1257)
T KOG0430|consen 159 SFAVDSD----------------ICGPG-CDGFSIA-----E--------------EKDIEDLS-PPYDPKKELIFPPEL 201 (1257)
T ss_pred hhccCCC----------------ccccC-ccccccc-----c--------------cccccccc-CCCCCccCcccChHH
Confidence 9996542 33211 0011210 0 11556667 899998 99999999
Q ss_pred hccCCCCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEE
Q 000657 256 LLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLE 335 (1370)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~ 335 (1370)
+..... ..+++ ++.+|+.|.||+|++++++++|+++||+|||..+++++.+. ++.+||+++||||+.++.++++|+
T Consensus 202 ~~~~~~-~~~~~-~~~~W~~P~sl~eL~~~~~~~~~~~Lv~GNT~~gv~~r~~~--~~~~Id~~~v~el~~~~~~~~gi~ 277 (1257)
T KOG0430|consen 202 LKRKKT-TLLGN-DGIRWYWPVSLEELFELKANKPDAKLVAGNTAHGVYRRSPD--YQKFIDVSGVPELKALNVDDNGLE 277 (1257)
T ss_pred hccccc-cccCC-CCcEEeCcccHHHHHHHHhcCcceEEEeccccceEEeccCC--CcceechhcCchhhhcccCCCceE
Confidence 876333 44444 78999999999999999999999999999999999999988 899999999999998888999999
Q ss_pred EcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCC----CCChhHHHHhcCCEEEE
Q 000657 336 IGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP----ISDLNPLWMASGAKFHI 411 (1370)
Q Consensus 336 IGA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp----~sD~~p~L~al~A~v~i 411 (1370)
|||++||+++++.|++.+. .+. +.+|+.+++|+++||++||||.|||||||+.++| +||++|+|+|+||+|++
T Consensus 278 lGa~~sls~~~~~l~~~~~-~~~--~~~~~~~~~hl~~~A~~~IRN~atigGnI~~~~~~~~f~SDl~~~l~a~~a~v~~ 354 (1257)
T KOG0430|consen 278 LGAALSLSETMELLRKLVK-RPG--FEYFKALWEHLKWFANVQIRNVGTIGGNICTKAQSPEFPSDLFILLEALDAKVTI 354 (1257)
T ss_pred EcccccHHHHHHHHHHHHh-CcH--HHHHHHHHHHHHHhcccceeccccccceeEeccCCCCCchhHHHHHHhhccEEEE
Confidence 9999999999999988877 432 2799999999999999999999999999999988 89999999999999999
Q ss_pred EeCCCCeEEEehhHhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEE
Q 000657 412 VDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDA 491 (1370)
Q Consensus 412 ~s~~g~~R~vpl~dF~~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~ 491 (1370)
.+..+...++ ||.+|+++.|.+.|||.+|+||...+ +|.+||+++|+++|||+||++|+..++ +|+++
T Consensus 355 ~~~~~~~~~~----~l~~y~~~~l~~~~illsv~ip~~~~--~f~~~k~a~R~e~a~a~vNa~fl~e~~------~V~~~ 422 (1257)
T KOG0430|consen 355 LNNSGDLEKV----FLEEYLGSSLGAKEILLSVVLPASRK--YFESYKQAPRRENAIAYVNAAFLAEVG------KVSSA 422 (1257)
T ss_pred eecCCcccee----eHhhhhccccCcceEEEEEEccCcHH--HHHHHHhcccccchhhhhhHHhhhccc------eeeee
Confidence 9987754444 55555577899999999999999866 999999999999999999998888765 79999
Q ss_pred EEEEccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhhccCCCC
Q 000657 492 LLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNS 571 (1370)
Q Consensus 492 rIa~Ggva~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~~~~~~~ 571 (1370)
||+|||++|..+++.++|+.|.||.|+++.+++|+..|..++.|+. |+++++||+.||.+||||||+.+.+..+.
T Consensus 423 ~i~fGg~~p~~i~a~~~~~~~~gk~~~~~ll~~a~~lL~~~l~~~~--p~~~~~yR~~La~sfffKF~l~~~~~~~~--- 497 (1257)
T KOG0430|consen 423 RICFGGIAPDFIHAKKTEELLLGKPWEEELLEDAFGLLQSDLVPDE--PGGMPEYRKKLALGFFFKFLLKVAHKVKN--- 497 (1257)
T ss_pred eEeecCcCcchhhhhhHHHHhhcccccHHHHHHHHHhhhhhccCCC--CCCcHHHHHHHHHHHHHHHHHHHhhhccc---
Confidence 9999999999999999999999999999999999999999998776 88999999999999999999999988741
Q ss_pred cccCCCcccccccccccCCCccccccccccCCCCccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceE
Q 000657 572 IKESVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARI 651 (1370)
Q Consensus 572 ~~~~~~~~~~s~~~~~~r~~~~g~q~~~~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I 651 (1370)
-....++.....+|++++.|.|.+..+..+||+|+.++.+..|+||||.|+|||+.+++.||++||.|+++||+|
T Consensus 498 -----~~~~~~g~~~~~~~~ls~~Q~~~~~q~~~pVG~pi~~~~a~~qaSGEAvY~dDip~~~n~lh~aFV~St~p~A~I 572 (1257)
T KOG0430|consen 498 -----GNKFITGGSLLARPLLSGGQQFETTQEHYPVGRPVEKLEALIQASGEATYVDDIPTPPNTLHAAFVLSTKPHAKI 572 (1257)
T ss_pred -----cCCccCCCccccccccccceeecCCCCCCcCcchhhhhhhhhhcccceEEecCCCCCCCeeEEEEEEcccCCcEE
Confidence 122334455667899999999988877999999999999999999999999999999999999999999999999
Q ss_pred eeecchhccCCCCEEEEEecCCCCCCCC--CCC--CCccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeec
Q 000657 652 LSIDDSGARSSPGFVGIFFAEDVQGDNR--IGP--VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEEL 727 (1370)
Q Consensus 652 ~sID~s~A~~~pGVv~Vvt~~Dipg~n~--~g~--~~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~l 727 (1370)
+|||+|+|+++|||+++++++|+|+.|. .+. ...|+++||+++|+++||+||+|||+|.++|++||++|+|+|++|
T Consensus 573 ~sID~seAl~~~GVv~~~~akDiPg~n~~~i~~~~~~~de~lFA~~~v~~~GQ~ig~ivAdt~~~A~rAA~lVkv~Y~~l 652 (1257)
T KOG0430|consen 573 LSIDASEALKLPGVVAFFSAKDIPGNNMKNIGNMFFPEDEELFATDVVTCVGQPIGVIVADTHELAKRAAKLVKVEYEEL 652 (1257)
T ss_pred eeecchhhcCCCceEEEEecccCCCCCccccccccCCCccceeecceeEEcCcEEEEEEeCCHHHHHHhhhceEEEeccC
Confidence 9999999999999999999999999883 322 257899999999999999999999999999999999999999999
Q ss_pred -CcCCCHHHHHhccCCCCCCccccccCCcccccccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCC
Q 000657 728 -PAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQA 806 (1370)
Q Consensus 728 -p~v~~~~~A~~~~a~~~~~~~~~~~Gdv~~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~ 806 (1370)
|++++++||++..++++ ....+..+++.+.|...++|.++|++++.+.|+|||||||+++|+|+ ++ .|.||+||||
T Consensus 653 ~p~I~t~e~Ai~~~s~~~-~~~~~~~~~~~~~~~~~~~d~i~~Ge~~mG~QeHFYmEtQttl~vP~-e~-el~v~~STQ~ 729 (1257)
T KOG0430|consen 653 PPPILPSEDAVKDKSLSE-TEPRLRKGDVGKSFQLEECDKILEGELDMGGQEHFYMEPQTTLVVPF-EG-ELQVYSSTQW 729 (1257)
T ss_pred CCceecHHHHHhhhcccC-CCccccccCccccccccccceeEEEEEEecceeEEEeccceeEEeec-CC-eEEEEEcCcC
Confidence 67999999999988766 56667778776666325679999999999999999999999999998 34 8999999999
Q ss_pred hHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEE
Q 000657 807 PQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKV 886 (1370)
Q Consensus 807 p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~ 886 (1370)
|..+|..||++||||.+||+|+++|+|||||||.+++.+++++|||+|+|++||||++++|++||..+|+|||+..+||+
T Consensus 730 ~~~tQ~~VA~~Lgipa~~V~v~trRvGGGFGGK~trs~~VA~a~ALaA~Kl~RPvr~~l~r~~dM~itG~Rhp~~~~Ykv 809 (1257)
T KOG0430|consen 730 PDFTQSVVAHVLGLPANKVQVKTRRLGGGFGGKETRSNPVAAAAALAAYKLNRPVRFVLSRESDMIITGKRHPFHGKYKV 809 (1257)
T ss_pred cHHHHHHHHHHhCCCccceEEEEEeeccccccccccccHHHHHHHHHHHHhCCCEEEEecchhhhhhcCCccceEEeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHH
Q 000657 887 GFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQ 966 (1370)
Q Consensus 887 g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mD 966 (1370)
|+++||||+|++.++|.|+|+..|+++.++ +++.+.+++|++||+|+++++|+||.|+++||||||.||++++.|++|.
T Consensus 810 gf~~~GkI~aL~~~~~~naG~s~d~S~~~~-~~~~~~~n~Y~~~~~r~~G~~ckTN~pSnTa~Rg~G~pQG~~i~E~iie 888 (1257)
T KOG0430|consen 810 GFKSDGKILALDLEFYENAGWSKDESPSVL-RAMFHSDNVYEIGDVRFDGYVCKTNLPSNTAFRGPGSPQGILITENIIE 888 (1257)
T ss_pred EEccCCeEEEEehhhhhccCCCcCcchHHH-hhhhhhhheecccceeeeeeEEecCCCCcchhcCCCChhhHHHHHHHHH
Confidence 999999999999999999999999999888 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHhcCCCCCccccCccccCCCHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccc
Q 000657 967 RVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGIS 1046 (1370)
Q Consensus 967 elA~~lg~DP~e~Rl~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~ 1046 (1370)
++|.++|+||.|+|++|+++.|+.+++++.++.+.+.+||+++.+.++|++|+.++++||+.|+||||||++.|++||++
T Consensus 889 ~VA~~~g~d~eeVR~~N~y~eg~~~~~~~~~~~~~l~~~w~~~~~sS~y~~Rk~ev~~FN~~N~WrKRGi~~vp~~f~i~ 968 (1257)
T KOG0430|consen 889 RIAFELGKDPEEVRKINFYVEGSLTYYHGELQHCTLPQLWPECLVSSKFEKRKSEIEEFNKENRWKKRGLAMVPMKFGIS 968 (1257)
T ss_pred HHHHHhCCCHHHHhhhhhhhcccccccCCCcccCcHHHHHHHHHHhchHHHHHHHHHHhhhcChhhhcCceEeeeeccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCceeEEEEEecCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHH
Q 000657 1047 FTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGA 1126 (1370)
Q Consensus 1047 ~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~ 1126 (1370)
+.. ++.|.|.||.||||.|.||++|||||++|+++|+||+.||||++.|++.++||+.+||+++|+||.++++.|.
T Consensus 969 ~~~----~~~a~V~Iy~DGSV~v~hgGiEmGQGL~TK~~Qvaa~~l~ip~~~v~v~~tsT~~v~na~~Ta~S~~Sd~~g~ 1044 (1257)
T KOG0430|consen 969 FTG----QAPALVHIYTDGTVVVTHGGIEMGQGLNTKVAQVAAYALGIPLSSVFVSETSTDKVPNASPTAASVSSDMYGA 1044 (1257)
T ss_pred ccC----CCceEEEEEcCCeEEEEECcEEcccchhHHHHHHHHHHhCCcccceEEeecccccccCCCccccccccccccH
Confidence 854 3789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCC
Q 000657 1127 AVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLT 1206 (1370)
Q Consensus 1127 Av~~Ac~~L~~rl~~~a~~~~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~T 1206 (1370)
||++||++|.+||+++..+++..+|++++.+||.+.++|+++.+|+ +.|++|.|++||++++|||||++|
T Consensus 1045 AV~~~C~~l~~RL~Pv~~k~~~~tw~~~i~~AY~q~V~LsAs~~~~----------~~g~~~~Y~~yG~a~sEVEID~LT 1114 (1257)
T KOG0430|consen 1045 AVLDACETINARLEPVKSKHNFNTWEELIQAAYGQSINLSASDWYK----------PEGDMFPYLTYGAAASEVEIDTLT 1114 (1257)
T ss_pred HHHHHHHHHHHhhhhhhhhcCCccHHHHHHHHhhCccceeeecccc----------CCCCcccceeccceeEEEEEEEec
Confidence 9999999999999999999998999999999999999999986554 357789999999999999999999
Q ss_pred CcEEEEEEEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEE
Q 000657 1207 GDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNV 1286 (1370)
Q Consensus 1207 G~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v 1286 (1370)
|+++|+|+++++|||.+|||.++.|||||+|+||+|++++||+.||+ +|.++|+++|+||||++.|||.+|+|
T Consensus 1115 G~~~ilRtDIv~D~G~SLNPaIDIGQIEGAFvQGlG~~t~Eel~~~~-------~G~l~t~gt~~YKiP~~~dIP~~FrV 1187 (1257)
T KOG0430|consen 1115 GDTEVLRVDILYDCGESLNPAIDIGQIEGAFVQGLGLVTLEELIYDP-------EGSLLTNGTWTYKIPGAKDIPKDFRV 1187 (1257)
T ss_pred CcceEEEEEEeeecccccCcccccchhhhHHHhchhhhhhhhheeCC-------CceEeecCCCcccCCCcccCchheEe
Confidence 99999999999999999999999999999999999999999999998 79999999999999999999999999
Q ss_pred EEeecCCCCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhccccccc
Q 000657 1287 SLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDEFTAP 1358 (1370)
Q Consensus 1287 ~~~~~~~~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~~~~~~~ 1358 (1370)
.++...|++.+.|+||++||||+++++++++||++||..||+ .||....|+|||+|+++|.+++++.
T Consensus 1188 ~LL~~~pn~~~v~sSKA~GEPPl~La~sv~fAi~~Ai~aAR~-----~~f~L~~PaTpe~i~~~c~~~~~~~ 1254 (1257)
T KOG0430|consen 1188 ELLNKNPNKAGVMSSKATGEPPLFLAASVFFAIRQAIKSARK-----DWFRLEAPATPERIRLACGDEFSEF 1254 (1257)
T ss_pred eeccCCCCccceeeccccCCChHHHHHHHHHHHHHHHHHHhh-----ccccCCCCCCHHHHHHhhcchhhhh
Confidence 999546999999999999999999999999999999999986 2889999999999999999998765
|
|
| >PLN00192 aldehyde oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-262 Score=2558.40 Aligned_cols=1260 Identities=34% Similarity=0.557 Sum_probs=1127.1
Q ss_pred ceEEEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCC
Q 000657 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEG 96 (1370)
Q Consensus 18 ~~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 96 (1370)
++.|+|+|||+++++++++|++|||+|||++ ||||||.||++|+||||||+|+++|+.+|++.+++|||||+|+++++|
T Consensus 3 ~~~i~~~vNg~~~~~~~~~p~~~Ll~~LR~~~~ltgtK~gC~~G~CGaCtV~v~~~~~~~~~~~~~~v~sCl~~~~~~~g 82 (1344)
T PLN00192 3 NMSLVFAVNGERFELSSVDPSTTLLEFLRTQTPFKSVKLGCGEGGCGACVVLLSKYDPVLDQVEDFTVSSCLTLLCSVNG 82 (1344)
T ss_pred cceEEEEECCEEEEeccCCCCCcHHHHHHHhhCCCCcCCCCCCCcCCCcEEEEeeccccccCcCCcEEehHHHHHHHhCC
Confidence 4579999999999996799999999999996 999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcC-----CCC------CCHHHHHHHhcCccccc
Q 000657 97 MHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSS-----QTP------PTEEQIEESLAGNLCRC 165 (1370)
Q Consensus 97 ~~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~-----~~~------~~~~~i~~~l~gnlCRC 165 (1370)
++|+|||||++..+.|||||+||+++|++|||||||||||++|+||+++ |+| ++++||+++|+||||||
T Consensus 83 ~~i~TvEgl~~~~~~lhpvq~a~~~~~~~QCGfCtpG~vms~~~ll~~~~~~~~~~p~~~~~~~~~~~i~~~l~gnlCRC 162 (1344)
T PLN00192 83 CSITTSEGLGNSKDGFHPIHKRFAGFHASQCGFCTPGMCISLFSALVNADKTDRPEPPSGFSKLTVVEAEKAVSGNLCRC 162 (1344)
T ss_pred CEEEeecCcCCCCCCCCHHHHHHHHcCCCccCCCChHHHHHHHHHHHhcccccCCCcccccCCCCHHHHHHHhcCCceeC
Confidence 9999999998546789999999999999999999999999999999662 232 38999999999999999
Q ss_pred CCChhHHHHHHHHHhcccccccccCcccccCCc-cccCCCCCCCCCCCCCCCCCcccccccccCCcccccccccCCCCCC
Q 000657 166 TGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGE-FVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTY 244 (1370)
Q Consensus 166 tgy~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (1370)
|||++|++|+++++.+.+ ++++. .||++++ .| + . ....+|++|
T Consensus 163 tgY~~i~~a~~~~~~~~~----------~~~~~~~~~~~~~---~~-------~-~---------------~~~~~~~~~ 206 (1344)
T PLN00192 163 TGYRPIVDACKSFAADVD----------IEDLGLNSFWKKG---ES-------E-E---------------AKLSKLPPY 206 (1344)
T ss_pred CCCHHHHHHHHHHHhhcc----------chhcccccccccC---Cc-------c-h---------------hhhhhcccC
Confidence 999999999999986531 22221 2555422 01 0 0 011468889
Q ss_pred CCC-CC-CCChhhhcc--CCCCccccCCCCceEEecCCHHHHHHHHhhCC----CcEEEeccCcceeeeeecccccceEE
Q 000657 245 TEK-EL-IFPPELLLR--KSNPLNLSGFGGLKWYRPLKLQHLLELKSKYP----DSKLLVGNTEVGIEMRLKRMQYQVLI 316 (1370)
Q Consensus 245 ~~~-~~-~~p~~l~~~--~~~~~~~~~~~~~~~~~P~sl~e~l~ll~~~~----~a~lvaGgTdl~v~~k~~~~~~~~lI 316 (1370)
+++ ++ +| |+|+.. ....+.+. ++++||+|+||+||+++|+++| ++++||||||++++ +. ...|+++|
T Consensus 207 ~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~P~sl~ea~~ll~~~~~~~~~a~lvAGgTdl~~~-k~-~~~p~~lI 281 (1344)
T PLN00192 207 NHSDHICTF-PEFLKKEIKSSLLLDS--SRYRWYTPVSVEELQSLLESNNFDGVSVKLVVGNTGTGYY-KD-EELYDKYI 281 (1344)
T ss_pred CCccccccC-hhhhhcccCccceecC--CCceEECcCCHHHHHHHHHhCCCCCCCeEEEEeCCcceee-ec-cCCCCeEE
Confidence 987 77 77 677643 22233333 5789999999999999999996 89999999999884 44 66789999
Q ss_pred ecCCcccccceeecCCcEEEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCC--
Q 000657 317 SVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP-- 394 (1370)
Q Consensus 317 dl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp-- 394 (1370)
||++|+||+.|+.++++|+|||+|||++++++++.. ..+. .+|+.|++++++|||+||||+|||||||++|+|
T Consensus 282 di~~I~EL~~I~~~~~~l~IGA~vTl~el~~~l~~~--~~~~---~~~p~L~~~~~~vAs~qIRN~aTlGGNI~~Asp~~ 356 (1344)
T PLN00192 282 DIRHIPELSMIRRDEKGIEIGAVVTISKAIEALREE--SKSE---YVFKKIADHMEKIASRFVRNTGSIGGNLVMAQRKQ 356 (1344)
T ss_pred EcCCChhhhcEEecCCEEEEeecCcHHHHHHHHHhh--cccc---chHHHHHHHHHHhcChhhccceechhhhcccCCCC
Confidence 999999999999999999999999999999887643 1111 169999999999999999999999999999974
Q ss_pred -CCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhcccccccCCCCeEEEEEEccCCC------CccceeeeeecccC-cc
Q 000657 395 -ISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTR------PFEFVKEFKQAHRR-DD 466 (1370)
Q Consensus 395 -~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~g~~~~~L~~~Eil~~I~iP~~~------~~~~~~~~K~~~R~-~~ 466 (1370)
+||++|+|+||||+|+|.+.+| +|+||++|||.+ +.|++||||++|+||.+. ...+|..||+++|+ ++
T Consensus 357 p~sD~~p~LlAl~A~v~l~s~~g-~R~vpl~dFf~~---~~l~~~Eil~~I~iP~~~~~~~~~~~~~f~~yk~~~Rr~~~ 432 (1344)
T PLN00192 357 FPSDIATILLAAGSTVNIQNASK-REKLTLEEFLER---PPLDSKSLLLSVEIPSWTSSSGSDTKLLFETYRAAPRPLGN 432 (1344)
T ss_pred CchhHHHHHHHhCcEEEEEeCCc-eEEEeHHHHhcc---CccCCcceEEEEEccCCccccccCcccceeeeeeccccccc
Confidence 6999999999999999999999 999999999984 569999999999999653 34678889999997 88
Q ss_pred ccceeeeEEEEEEe-----cCCcceEEEEEEEEEccCCC-ccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCC
Q 000657 467 DIALVNAGMRVYLE-----EKDEEWVVSDALLVYGGVAP-LSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAP 540 (1370)
Q Consensus 467 d~a~Vn~A~~~~~~-----~~~~~~~i~~~rIa~Ggva~-~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~ 540 (1370)
|||+||+||+++++ +++ +|+++||+||||+| +|+|++++|++|.||+|+++++++|.+++.+++.|.++
T Consensus 433 diA~V~aA~~v~~~~~~~~~~~---~i~~aria~Ggvap~~P~ra~~~E~~L~Gk~~~~~~l~~A~~~l~~~~~p~~~-- 507 (1344)
T PLN00192 433 ALPYLNAAFLAEVSQDASSGGI---VVNDCRLAFGAYGTKHAIRARKVEEFLTGKVLSDSVLYEAVRLLKGIVVPEDG-- 507 (1344)
T ss_pred chhhheeeEEEEEEecccCCCC---eEeEEEEEEecCCCCceecHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCCC--
Confidence 99999999999996 444 79999999999999 69999999999999999999999999999999987653
Q ss_pred CCChhhHHHhhHHHHHHHHHHHhhhccCCCCcccCC-------CcccccccccccCCCccccccccccCCCCccCCcccc
Q 000657 541 GGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESV-------PSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVH 613 (1370)
Q Consensus 541 ~~s~~YR~~la~~L~~k~l~~~~~~~~~~~~~~~~~-------~~~~~s~~~~~~r~~~~g~q~~~~~~~~~~iG~~~~r 613 (1370)
++|++||++|+.+||+|||+++++++.. ...+.. .+...|+...++||+++|.|.|++++++++||++++|
T Consensus 508 ~~s~eYRr~la~~l~~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~vG~~~~r 585 (1344)
T PLN00192 508 TSHPEYRSSLAVGFLFDFLSPLIESNAK--SSNGWLDGGSNTKQNPDQHDDVKKPTLLLSSKQQVEENNEYHPVGEPIKK 585 (1344)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhccc--cccccccccccccccccccccccccCCCCCcceeeecccccCcCCCCCcC
Confidence 4799999999999999999999987621 000011 1233688889999999999999988999999999999
Q ss_pred cCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCC-CCCCCCC--CCcccccc
Q 000657 614 LSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQ-GDNRIGP--VVADEELF 690 (1370)
Q Consensus 614 ~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dip-g~n~~g~--~~~d~~~l 690 (1370)
+|+..|+||+++|++|++++|||||+++||||++||||++||+++|+++|||++|+|++|+| +.+.+|. ...|+|+|
T Consensus 586 ~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ahArI~sID~s~A~~~pGV~aV~t~~Dip~~~~~~g~~~~~~~~~~l 665 (1344)
T PLN00192 586 VGAALQASGEAVYVDDIPSPKNCLYGAFIYSTKPLARVKGIKFKSNLVPQGVLAVITFKDIPKGGQNIGSKTIFGPEPLF 665 (1344)
T ss_pred hhhHhhcccceecccccCCCCCCEEEEEEecCCCceEEEEEEhHHhhcCCCcEEEEchHHcCcccccCCCCCCCCCceec
Confidence 99999999999999999855899999999999999999999999999999999999999998 2333443 24589999
Q ss_pred ccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEee--c-CcCCCHHHHHhccCCCCC--CccccccCCcccccccCCCc
Q 000657 691 ASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEE--L-PAILSIQEAIDAKSFHPN--TERCFRKGDVDICFQSGQCD 765 (1370)
Q Consensus 691 a~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~--l-p~v~~~~~A~~~~a~~~~--~~~~~~~Gdv~~af~~~~a~ 765 (1370)
++++|||+|||||+|||+|+++|++|+++|+|+||+ | |+++|+++|+++++++.. .......||++++| ++|+
T Consensus 666 a~~~Vr~~Gq~Va~VvA~t~~~A~~Aa~~V~VeYe~~~l~p~v~~i~~Al~~~s~~~~~~~~~~~~~GD~~~af--~~a~ 743 (1344)
T PLN00192 666 ADEVTRCAGQRIALVVADTQKHADMAANLAVVEYDTENLEPPILTVEDAVKRSSLFEVPPFLYPKPVGDISKGM--AEAD 743 (1344)
T ss_pred cCCEEEEcCCeEEEEEECCHHHHHHHhccCEEEEecCCCCCcccCHHHHhcCCCCcccChhhcccccCCHHHHh--ccCC
Confidence 999999999999999999999999999999999997 4 999999999998875421 12334679999999 9999
Q ss_pred cEE-EEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCccch
Q 000657 766 KII-EGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSA 844 (1370)
Q Consensus 766 ~vv-e~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~ 844 (1370)
++| |++|++++|+|+||||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.....
T Consensus 744 ~vv~e~~~~~~~q~H~~mEp~~~vA~~~-~dg~l~V~~sTQ~p~~~r~~vA~~Lgip~~~VrV~~~~vGGgFGgK~~~~~ 822 (1344)
T PLN00192 744 HKILSAEIKLGSQYYFYMETQTALALPD-EDNCIVVYSSTQCPEYVHSVIARCLGIPEHNVRVITRRVGGGFGGKAVKSM 822 (1344)
T ss_pred eEEEEEEEEECCEeeeeccCceEEEEEc-CCCCEEEEECCCCHHHHHHHHHHHhCCChHHEEEEecccccCCCccccccc
Confidence 976 999999999999999999999998 577899999999999999999999999999999999999999999987667
Q ss_pred HHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccC
Q 000657 845 FIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSD 924 (1370)
Q Consensus 845 ~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~ 924 (1370)
+++++||++|+++||||||+|||+|+|..+++|||+.++||+|+++||+|+|++++++.|+|+|.+.+. ++...+.+..
T Consensus 823 ~~~~~aAlaA~~~gRPVr~~~sR~Edm~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~~~-~~~~~~~~~~ 901 (1344)
T PLN00192 823 PVATACALAAFKLQRPVRMYLNRKTDMIMAGGRHPMKITYSVGFKSDGKITALHLDILINAGISPDISP-IMPRNIIGAL 901 (1344)
T ss_pred hHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCcCceEEEEEEEECCCCCEEEEEEEEEEecccCCCcch-HHHHHHhhcC
Confidence 788999999999999999999999999999999999999999999999999999999999999987664 3344455677
Q ss_pred CCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCcc-ccCcc---ccCC
Q 000657 925 NVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSIL-HYGQQ---LQHC 1000 (1370)
Q Consensus 925 ~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~-~~g~~---~~~~ 1000 (1370)
++|+|||++++++.|+||++|+|||||||.+|++|++|++||++|++|||||+|||++|++++++.. +++++ ++++
T Consensus 902 ~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~pq~~fa~E~~mD~lA~~lg~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~ 981 (1344)
T PLN00192 902 KKYDWGALSFDIKVCKTNLSSRSAMRAPGEVQGSYIAEAIIEHVASTLSMDVDSVRKINLHTYESLKLFYGDSAGEPSEY 981 (1344)
T ss_pred CCcCCCceEEEEEEEECCCCCCCcccCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHhcCCCccccccCCCCcccccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999765432 44444 3688
Q ss_pred CHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEEEEEecCCcEEEEEcCccCCcch
Q 000657 1001 TLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGL 1080 (1370)
Q Consensus 1001 ~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~ 1080 (1370)
.+++||+++++.++|++|++++++||+.|+|+|||+++++..|++++ +++.+.|+|+.||+|+|.+|++|||||+
T Consensus 982 ~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~krGig~~~~~~~~~~-----~~~~a~v~i~~DGsv~v~~G~~e~GQG~ 1056 (1344)
T PLN00192 982 TLPSIWDKLASSSEFKQRTEMVKEFNRSNKWKKRGISRVPIVHEVML-----RPTPGKVSILSDGSIAVEVGGIEIGQGL 1056 (1344)
T ss_pred cHHHHHHHHHHhcChHHHHHHHHHHhhcCCceEEEEEEEEEEEeccc-----cCCceEEEEeCCceEEEEECCCCCCCCH
Confidence 99999999999999999988888899999999999999999998754 2467999999999999999999999999
Q ss_pred HHHHHHHHHHHhCC--------CcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhC----CC
Q 000657 1081 HTKVAQVAASAFNI--------PLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH----NF 1148 (1370)
Q Consensus 1081 ~T~~~qiaAe~Lgi--------p~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~~----~~ 1148 (1370)
+|+++||||++||| |+|+|+|..+||+.+|++++|+|||+|+++|.||++||++|++||+++++++ ..
T Consensus 1057 ~T~~aQiaA~~LGi~~~~~~~ip~e~I~v~~~dT~~~p~~~~t~gSr~t~~~G~Av~~Ac~~l~~rl~~~a~~~~~~~~~ 1136 (1344)
T PLN00192 1057 WTKVKQMAAFGLGMIKCDGGEDLLDKIRVIQSDTLSMIQGGFTAGSTTSESSCEAVRLCCVILVERLKPIKERLQEQMGS 1136 (1344)
T ss_pred HHHHHHHHHHHhCCccccccCCChhhEEEEecCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999995 9999999999999999999999999999999999999999999999998887 56
Q ss_pred CCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEEEEEEEEecCcccCccc
Q 000657 1149 NSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAI 1228 (1370)
Q Consensus 1149 ~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~~~D~G~~iNP~~ 1228 (1370)
.+|++++..+|..+.+|+++++|.++. .++.||+||++++|||||++||+++|+|+++++|||++|||++
T Consensus 1137 ~~~~~~~~~a~~~~~~L~a~~~~~~~~----------~~~~y~~~ga~~~eVEVD~~TG~v~vlr~~~~~D~G~~INP~i 1206 (1344)
T PLN00192 1137 VTWDMLISQAYMQSVNLSASSYYTPDP----------SSMEYLNYGAAVSEVEVDLLTGETTILRSDIIYDCGQSLNPAV 1206 (1344)
T ss_pred cCHHHHHHHhcCCCCCeEEEEEECCCC----------CCccccceeEEEEEEEEecCCCcEEEEEEEEEEecCcccCHHH
Confidence 899999988876677899999985321 0134789999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeecCC-CCCCCCCCCcCCCc
Q 000657 1229 DVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHP-NVKAIHSSKAVGEP 1307 (1370)
Q Consensus 1229 ~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~-~~~~p~gaKGvGE~ 1307 (1370)
++|||||||+|||||+|+|++.||+ +|+++|++|++|+||++.|||.+|+|.++++ + +|.+|||+||+||+
T Consensus 1207 ~~GQIeGg~vqGiG~al~Ee~~yd~-------~G~llt~~~~dY~iPt~~DiP~~~~v~~~e~-~~~~~~p~gaKgvGE~ 1278 (1344)
T PLN00192 1207 DLGQIEGAFVQGIGFFMLEEYTTNS-------DGLVVTDGTWTYKIPTVDTIPKQFNVEILNS-GHHKKRVLSSKASGEP 1278 (1344)
T ss_pred HHHHHHHHHHHHHhHHhceeEEECC-------CCCCCCCChhhcCCCcccccCCceEEEEEeC-CCCCCCCCccccCccC
Confidence 9999999999999999999999998 8999999999999999999996699999997 6 58899999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHh---cC----CCcccCCCCCCCHHHHHHHhcccccccccC
Q 000657 1308 PFFLASSVFFAIKDAISAARAD---AG----HTGWFPLDNPATPERIRMACLDEFTAPFIN 1361 (1370)
Q Consensus 1308 ~~~~a~av~~AI~nAi~~A~~~---~G----~~~~~~~~lP~tpe~I~~a~~~~~~~~~~~ 1361 (1370)
|+++++++++||+|||++||++ .| ...+|..+.|+|||+|+++|.+++++.+..
T Consensus 1279 ~~~~~~~v~~Ai~~Ai~~Ar~~~~~~g~~~~~~~~~~l~~pat~e~i~~~~~~~~~~~~~~ 1339 (1344)
T PLN00192 1279 PLLLAASVHCATRAAIREARKQLLSWGGIDGSDSTFQLPVPATMPVVKELCGLDVVERYLE 1339 (1344)
T ss_pred cccccHHHHHHHHHHHHHHHhhhcccCCcccCCCceecCCCCChHHHHHhcCChHHHHhhh
Confidence 9999999999999999999999 78 777899999999999999999999887543
|
|
| >PRK09800 putative hypoxanthine oxidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-187 Score=1785.70 Aligned_cols=870 Identities=25% Similarity=0.334 Sum_probs=771.1
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccC-CCCCCCCceEEEEccccccCCcccceeecccccchhccCCc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLG-CGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~g-C~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 97 (1370)
|.|+|+|||++++++ ++|+++||++||++||||||.| |++|.||||||+||+ ++|+||++|+.+++|+
T Consensus 1 ~~i~~~vNg~~~~~~-~~~~~~l~~~LR~~~~~~~k~g~c~~g~CGaCtv~~dg----------~~v~sC~~~~~~~~g~ 69 (956)
T PRK09800 1 MIIHFTLNGAPQELT-VNPGENVQKLLFNMGMHSVRNSDDGFGFAGSDAIIFNG----------NIVNASLLIAAQLEKA 69 (956)
T ss_pred CeEEEEECCEEEEEe-cCCCCCHHHHHHHCCCCccccCCCCcccCCCCEEEECC----------eEEeHHHHHHHHcCCC
Confidence 468999999999997 9999999999999999999998 899999999999996 8999999999999999
Q ss_pred EEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHH
Q 000657 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV 177 (1370)
Q Consensus 98 ~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~ 177 (1370)
+|+|||||+ ..+.|||+|+||++++++|||||||||||++++||++||.| +++||+++|+|||||||||++|++|++.
T Consensus 70 ~i~Tvegl~-~~~~~~~~q~af~~~~~~QCG~CtpG~~m~~~~ll~~~~~p-~~~~i~~~l~gnlCRCtgy~~i~~av~~ 147 (956)
T PRK09800 70 DIRTAESLG-KWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAP-TREEIDDALSGLFSRDAGWQQYYQVIEL 147 (956)
T ss_pred EEEecCCcC-CCCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHhcCCCC-CHHHHHHHHhhchhccCCcHHHHHHHHH
Confidence 999999998 56789999999999999999999999999999999999999 9999999999999999999999999987
Q ss_pred HHhcccccccccCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCcccccccccCCCCCCCCCCCCCChhhhc
Q 000657 178 FAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLL 257 (1370)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 257 (1370)
++.... + .
T Consensus 148 ~~~~~~---------------------~---------------~------------------------------------ 155 (956)
T PRK09800 148 AVARKN---------------------N---------------P------------------------------------ 155 (956)
T ss_pred HHHhhc---------------------c---------------c------------------------------------
Confidence 652100 0 0
Q ss_pred cCCCCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEc
Q 000657 258 RKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 337 (1370)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IG 337 (1370)
.
T Consensus 156 ---------~---------------------------------------------------------------------- 156 (956)
T PRK09800 156 ---------Q---------------------------------------------------------------------- 156 (956)
T ss_pred ---------c----------------------------------------------------------------------
Confidence 0
Q ss_pred ccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCC
Q 000657 338 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGN 417 (1370)
Q Consensus 338 A~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~ 417 (1370)
. .. -
T Consensus 157 -------------~---~~-----------------------------------------------------------~- 160 (956)
T PRK09800 157 -------------A---TI-----------------------------------------------------------D- 160 (956)
T ss_pred -------------c---cc-----------------------------------------------------------c-
Confidence 0 00 0
Q ss_pred eEEEehhHhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEcc
Q 000657 418 IRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGG 497 (1370)
Q Consensus 418 ~R~vpl~dF~~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Gg 497 (1370)
..
T Consensus 161 ---------------------------------------------------------------~~--------------- 162 (956)
T PRK09800 161 ---------------------------------------------------------------IA--------------- 162 (956)
T ss_pred ---------------------------------------------------------------cc---------------
Confidence 00
Q ss_pred CCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhhccCCCCcccCCC
Q 000657 498 VAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVP 577 (1370)
Q Consensus 498 va~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~~~~~~~~~~~~~ 577 (1370)
T Consensus 163 -------------------------------------------------------------------------------- 162 (956)
T PRK09800 163 -------------------------------------------------------------------------------- 162 (956)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccCCCccccccccccCCCCccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecch
Q 000657 578 STHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDS 657 (1370)
Q Consensus 578 ~~~~s~~~~~~r~~~~g~q~~~~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s 657 (1370)
.+.+++++.||++++|+|++.||||+++|++|+.+ |||||++++|||++||||++||+|
T Consensus 163 --------------------~~~~~~~~~VGk~~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~vvrSp~ahArI~sID~s 221 (956)
T PRK09800 163 --------------------PTFRDDLEVIGKHYPKTDAAKMVQAKPCYVEDRVT-ADACVIKMLRSPHAHALITHLDVS 221 (956)
T ss_pred --------------------cccccccccCCCCCCCcChHhhCcccccccccCCC-CCCEEEEEeecCCCcEEEeeeEHH
Confidence 00012335699999999999999999999999987 799999999999999999999999
Q ss_pred hccCCCCEEEEEecCCCCC------CCCCCCCCccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCC
Q 000657 658 GARSSPGFVGIFFAEDVQG------DNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAIL 731 (1370)
Q Consensus 658 ~A~~~pGVv~Vvt~~Dipg------~n~~g~~~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~ 731 (1370)
+|++||||++|+|++|+|. .+.++...+++++|++++|||+|||||+|||+|+++|++|+++|+|+||+||+++
T Consensus 222 ~A~a~pGV~~Vvt~~Dvp~~~~~~~~~~~~~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~V~Veye~Lp~v~ 301 (956)
T PRK09800 222 KAEALPGVVHVITHLNCPDIYYTPGGQSAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEYEVLKPVM 301 (956)
T ss_pred HHHhCCCeEEEEcHHHCCcccccccCcCCCCCCCCCccccCCeEEEcCCeEEEEEECCHHHHHHHhcCCceEEEeCCccC
Confidence 9999999999999999983 1222222223445669999999999999999999999999999999999999999
Q ss_pred CHHHHHhccCC--CCC-----------------------------------------CccccccCCcccccccCCCccEE
Q 000657 732 SIQEAIDAKSF--HPN-----------------------------------------TERCFRKGDVDICFQSGQCDKII 768 (1370)
Q Consensus 732 ~~~~A~~~~a~--~~~-----------------------------------------~~~~~~~Gdv~~af~~~~a~~vv 768 (1370)
|+++|+++++. |+. ......+||++++| ++|++||
T Consensus 302 d~~~Al~~~a~~vh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af--~~a~~vv 379 (956)
T PRK09800 302 SIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGF--ADADVII 379 (956)
T ss_pred CHHHHhcCCCceecccccccccccccccccccccccccccccccccccccCCCCceeeeccccCCCHHHHH--hhCCEEE
Confidence 99999988763 321 01224679999999 9999999
Q ss_pred EEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCccchHHHH
Q 000657 769 EGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAA 848 (1370)
Q Consensus 769 e~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~~~~~ 848 (1370)
|++|++++|+|++|||++|+|+|+ +|+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|.+.. .+.
T Consensus 380 e~~y~~~~~~H~~mEp~~aiA~~d--~~~l~v~~stQ~p~~~r~~vA~~LGlp~~kVrV~~~~vGGgFG~K~~~~--~e~ 455 (956)
T PRK09800 380 ERTYNSTQAQQCPTETHICFTRMD--GDRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQDIL--LEE 455 (956)
T ss_pred EEEEEeCCcccccCCCceEEEEEe--CCeeEEEECCCcHHHHHHHHHHHHCCCHHHeEEEcCCCCccCcCccccc--HHH
Confidence 999999999999999999999997 4689999999999999999999999999999999999999999998643 456
Q ss_pred HHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcc
Q 000657 849 AAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYE 928 (1370)
Q Consensus 849 ~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ 928 (1370)
.||++|+++||||||+|||+|+|.++++||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+...+..+..++|+
T Consensus 456 ~aA~aA~~~grPVkl~~tReE~~~~~~~R~~~~~~~k~g~d~dG~I~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ 535 (956)
T PRK09800 456 VCAWATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYP 535 (956)
T ss_pred HHHHHHHHhCCCEEEEeeHHHHhhCcCCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcCCCcchHHHHHHHhhcCcCcc
Confidence 68999999999999999999999999999999999999999999999999999999999988777777666666779999
Q ss_pred cCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCcccc-----------Ccc-
Q 000657 929 IPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHY-----------GQQ- 996 (1370)
Q Consensus 929 ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~~~-----------g~~- 996 (1370)
|||++++++.|+||++|+|+|||||.+|+.||+|++||++|++|||||+|||+||++++|+.+++ +.+
T Consensus 536 ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~Es~mDelA~~lg~DPve~R~rN~~~~gd~~~~~~~~~~g~~~~~~~~ 615 (956)
T PRK09800 536 CDNVDFQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPS 615 (956)
T ss_pred cceEEEEEEEEECCCCCCCCcCCCCcchHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999998887543 222
Q ss_pred ccCCCHHHHHHHHHHhcCChhhhHhhhhcccCCCcc-eeeeEEEeeeeccccccccCCceeEEEEEecCCcEEEEEcCcc
Q 000657 997 LQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWK-KRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVE 1075 (1370)
Q Consensus 997 ~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~-grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e 1075 (1370)
++++.+.+||++++++++|+++++ .+++|+ |+|+++.+..+|++. .+.+.+.|+|++||+|+|.+|++|
T Consensus 616 ~~s~~~~~~L~~~~e~~~w~~~~~------~~g~~~~G~Gia~~~~~~g~~~----~~~~~a~v~l~~dGsv~v~~g~~e 685 (956)
T PRK09800 616 AASCALEEILRQGREMIQWSSPKP------QNGDWHIGRGVAIIMQKSGIPD----IDQANCMIKLESDGTFIVHSGGAD 685 (956)
T ss_pred ccCCCHHHHHHHHHHhcCcchhhh------hcCCCeeEEEEEEEEEcccCCC----CCCceEEEEECCCceEEEEECCCC
Confidence 567889999999999999987532 134554 777777655444331 246789999999999999999999
Q ss_pred CCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhC---------
Q 000657 1076 MGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH--------- 1146 (1370)
Q Consensus 1076 ~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~~--------- 1146 (1370)
||||++|+++|||||+||||+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||+..++++
T Consensus 686 ~GqG~~T~~~QiaAe~LGip~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~ 765 (956)
T PRK09800 686 IGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEPVADVQ 765 (956)
T ss_pred CCccHHHHHHHHHHHHHCCCceeEEEEeCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEE
Confidence 99999999999999999999999999999999999999999999999999999999999999998876653
Q ss_pred -----------CCCCHHHHHHHhhcc--cccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEEE
Q 000657 1147 -----------NFNSFAELASACYVQ--RIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRM 1213 (1370)
Q Consensus 1147 -----------~~~~~~~~~~~a~~~--~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r 1213 (1370)
..++|.+++..++.. ..++.++++|..|. .+|+|+|+++|||||++||+++|+|
T Consensus 766 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-------------~~~~~~a~~aeVeVD~~TG~vkvl~ 832 (956)
T PRK09800 766 LATPGVVRGKKGEVSFGDIAHKGETGTGFGSLVGTGSYITPD-------------FAFPYGANFAEVAVNTRTGEIRLDK 832 (956)
T ss_pred EecCCEEeCCCCcccHHHHHHHHhcCCCCCCeEEEEEecCCC-------------CCcceEEEEEEEEEECCCCcEEEEE
Confidence 114699988776543 23577777775432 2578999999999999999999999
Q ss_pred EEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeecCC
Q 000657 1214 ANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHP 1293 (1370)
Q Consensus 1214 ~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~ 1293 (1370)
+++++|||++|||.+++||||||++||||++|+|++.||+ +|+++|.+|++|++|++.|+|.+|+++++|+ +
T Consensus 833 ~~~~~D~G~vINP~~v~gQieGgi~qGiG~AL~Ee~~~d~-------~G~~~~~~l~~Y~iPt~~DiP~~i~v~~ve~-~ 904 (956)
T PRK09800 833 FYALLDCGTPVNPELALGQIYGATLRAIGHSMSEEIIYDA-------EGHPLTRDLRSYGAPKIGDIPRDFRAVLVPS-D 904 (956)
T ss_pred EEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhCCcEECC-------CCcCCCCCcccCCCCChhhCCCceEEEEEcC-C
Confidence 9999999999999999999999999999999999999998 7999999999999999999994499999997 9
Q ss_pred CCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000657 1294 NVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1353 (1370)
Q Consensus 1294 ~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~~ 1353 (1370)
+|.+|||+||+||+++++ +++||+|||++|+ |++ ++++|+|||+||+++.+
T Consensus 905 ~~~~p~GaKgvGE~~~~~---~a~AIanAI~~A~---G~r---~~~lP~tpe~vl~al~~ 955 (956)
T PRK09800 905 DKVGPFGAKSISEIGVNG---AAPAIATAIHDAC---GIW---LREWHFTPEKILTALEK 955 (956)
T ss_pred CCCCCCCCcccCCCcccc---hHHHHHHHHHHHh---CcC---cccCCCCHHHHHHHHhh
Confidence 999999999999999975 5789999999987 887 69999999999999863
|
|
| >TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-184 Score=1763.90 Aligned_cols=865 Identities=26% Similarity=0.358 Sum_probs=763.3
Q ss_pred EEECCEEEEeccCCCCCcHHHHHhhCCCCcccc-CCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEE
Q 000657 23 LYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKL-GCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVIT 101 (1370)
Q Consensus 23 ~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~-gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 101 (1370)
|+|||++++++ ++|+++|+++||++||||+|. ||++|.|||||||||+ ++|+||++|+.+++|++|+|
T Consensus 1 ~~~Ng~~~~~~-~~~~~~l~~~LR~~~l~~~k~~~c~~g~CGaCtv~~dg----------~~v~sC~~~~~~~~g~~i~T 69 (951)
T TIGR03313 1 FTLNGAPQTLE-CKLGENVQTLLFNMGMHSVRNSDDGFGFAGSDAILFNG----------VLKNASLLIAAQLEGAEVRT 69 (951)
T ss_pred CEECCEEEEEe-cCCCCCHHHHHHHCCCCCCcCCCCCcccCCCCEEEECC----------eEeeHHHHHHHHcCCCEEEe
Confidence 78999999997 999999999999999999999 7999999999999996 89999999999999999999
Q ss_pred eccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHHHHhc
Q 000657 102 VEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKT 181 (1370)
Q Consensus 102 vEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~ 181 (1370)
||||+ ..+.|||+|+||++++++|||||||||||++++||++||.| +++||+++|+|||||||||++|++|++.++..
T Consensus 70 iegl~-~~~~~~~~q~af~~~~a~QCG~CtpG~~~~~~~ll~~~~~p-~~~~i~~~l~gnlcrctgy~~i~~av~~~~~~ 147 (951)
T TIGR03313 70 AESLG-QWNQLSLVQQAMVDVGVVQSGYNDPAAALILTDLLDRNTQP-NRAEIDDALSGLFSRDAGYQQFYQVIELAVKR 147 (951)
T ss_pred cCcCC-CCCCCCHHHHHHHHcCCCcCCCChHHHHHHHHHHHhcCCCC-CHHHHHHHHhcceeccCCcHHHHHHHHHHHHh
Confidence 99998 56789999999999999999999999999999999999999 99999999999999999999999999866521
Q ss_pred ccccccccCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCcccccccccCCCCCCCCCCCCCChhhhccCCC
Q 000657 182 NDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLRKSN 261 (1370)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~ 261 (1370)
.. + .
T Consensus 148 ~~---------------------~---------------~---------------------------------------- 151 (951)
T TIGR03313 148 LK---------------------D---------------P---------------------------------------- 151 (951)
T ss_pred cc---------------------c---------------c----------------------------------------
Confidence 00 0 0
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEccccc
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVR 341 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vT 341 (1370)
.+
T Consensus 152 ----~~-------------------------------------------------------------------------- 153 (951)
T TIGR03313 152 ----EH-------------------------------------------------------------------------- 153 (951)
T ss_pred ----cc--------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEE
Q 000657 342 LTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTT 421 (1370)
Q Consensus 342 l~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~v 421 (1370)
+ . -
T Consensus 154 ---------~---~------------------------------------------------------------~----- 156 (951)
T TIGR03313 154 ---------K---Q------------------------------------------------------------S----- 156 (951)
T ss_pred ---------c---c------------------------------------------------------------c-----
Confidence 0 0 0
Q ss_pred ehhHhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCc
Q 000657 422 MAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPL 501 (1370)
Q Consensus 422 pl~dF~~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~ 501 (1370)
..
T Consensus 157 -----------------------------------------------------------~~------------------- 158 (951)
T TIGR03313 157 -----------------------------------------------------------IA------------------- 158 (951)
T ss_pred -----------------------------------------------------------cc-------------------
Confidence 00
Q ss_pred cccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhhccCCCCcccCCCcccc
Q 000657 502 SLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPSTHL 581 (1370)
Q Consensus 502 p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~~~~~~~~~~~~~~~~~ 581 (1370)
+ .
T Consensus 159 ----------------------------------~-~------------------------------------------- 160 (951)
T TIGR03313 159 ----------------------------------P-E------------------------------------------- 160 (951)
T ss_pred ----------------------------------C-c-------------------------------------------
Confidence 0 0
Q ss_pred cccccccCCCccccccccccCCCCccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccC
Q 000657 582 SAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARS 661 (1370)
Q Consensus 582 s~~~~~~r~~~~g~q~~~~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~ 661 (1370)
.+++++.|||+++|+|++.||||+++|++|+.+ |||||++++|||++||||++||+|+|++
T Consensus 161 ------------------~~~~~~~iGk~~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~v~rSP~ahArI~sID~s~A~a 221 (951)
T TIGR03313 161 ------------------FRDDLTIIGKNCPKIDAAKMVQAKPCYVEDRVP-ADACVIKMLRSPHPHAWITHLDVSKAEA 221 (951)
T ss_pred ------------------cccccccCCCCCcCcChHhhCccCccccccCCC-CCCEEEEEEecCCCcEEEEeeEHHHHHh
Confidence 002334699999999999999999999999987 7999999999999999999999999999
Q ss_pred CCCEEEEEecCCCCC------CCCCCCCCccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHH
Q 000657 662 SPGFVGIFFAEDVQG------DNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQE 735 (1370)
Q Consensus 662 ~pGVv~Vvt~~Dipg------~n~~g~~~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~ 735 (1370)
||||++|+|.+|+|. .+.++....++++|++++|||+|||||+|+|+|+|+|++|+++|+|+||+||+++|+++
T Consensus 222 ~pGV~~Vvt~~D~p~~~~~~~~~~~~~~~~~~~~l~~~~Vry~G~~vaaVvAet~~~A~~A~~~I~Veye~Lp~v~d~~~ 301 (951)
T TIGR03313 222 LPGVVHVITHLNCPDIYYTPGGQSAPEPSPLDRRMFGQKMRHVGDRVAAVVAESEEIALHALKLIEVEYDVLTPVMSIDE 301 (951)
T ss_pred CCCeEEEEeHHHCCccccCCCCccCCCCCCCcccccCCeEEEcCCEEEEEEECCHHHHHHHhcCCeeEEEeCCccCCHHH
Confidence 999999999999983 12222112344557899999999999999999999999999999999999999999999
Q ss_pred HHhccCC--CCCC-----------------------------------------ccccccCCcccccccCCCccEEEEEE
Q 000657 736 AIDAKSF--HPNT-----------------------------------------ERCFRKGDVDICFQSGQCDKIIEGEV 772 (1370)
Q Consensus 736 A~~~~a~--~~~~-----------------------------------------~~~~~~Gdv~~af~~~~a~~vve~~y 772 (1370)
|+++++. |+.. .....+||++++| ++|+++||++|
T Consensus 302 Al~~~ap~ih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~~~Gd~~~af--~~A~~vve~~y 379 (951)
T TIGR03313 302 AMAAEAPIVHDEPIVYGAGAPDDLEEQNANADPRGEHMIINFPIGSRPRKNIAASVHGHIGDLNKGF--AEADVIIERTY 379 (951)
T ss_pred HhcCCCCeeccccccccccccccccccccccccccccccccccccccCCCceeeeccccCCCHHHHH--hcCCEEEEEEE
Confidence 9988773 3210 1124679999999 99999999999
Q ss_pred EECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCccchHHHHHHHH
Q 000657 773 RVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAV 852 (1370)
Q Consensus 773 ~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAl 852 (1370)
++++|+|++|||++|+|+|+ +|+++||+|||+|+.+|..||++||||++||||+.+++|||||+|.+.. .+..||+
T Consensus 380 ~~~~~~H~~mEp~~aiA~~d--~~~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~--~e~~aA~ 455 (951)
T TIGR03313 380 ESTQAQQCPTETHICFTYMD--GERLVIHASTQVPWHVRRQVARIVGMKQHKVHVIKERVGGGFGSKQDIL--LEEVCAW 455 (951)
T ss_pred EECCEeeecCCCceEEEEEc--CCeEEEEECCcCHHHHHHHHHHHHCCCHHHeEEEcCCCCcCcCCccccc--HHHHHHH
Confidence 99999999999999999997 4689999999999999999999999999999999999999999998643 4456899
Q ss_pred HHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeE
Q 000657 853 PSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNV 932 (1370)
Q Consensus 853 aA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~ 932 (1370)
+|+++||||||+|||+|+|+++++||++.+++|+|+|+||+|+|++++++.|+|+|.+++..+...+.....++|+|||+
T Consensus 456 aA~~~GrPVkl~~tReE~~~~~~~R~~~~~~~k~g~d~dG~I~A~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~ 535 (951)
T TIGR03313 456 ATWVTGRPVYFRYTREEEFICNTSRHVAKVTVKLGAKKDGKLTAIDMDFRANTGPYGNHSLTVPSNGPALSLPLYPCDNV 535 (951)
T ss_pred HHHHhCCCEEEEeeHHHHhhccCCCCCeEEEEEEEECCCCcEEEEEEEEEEcCccCcccchHHhhhhhhhcCcCccCCeE
Confidence 99999999999999999999999999999999999999999999999999999999876665554444556689999999
Q ss_pred EEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCccc-----------cCcc-ccCC
Q 000657 933 RIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILH-----------YGQQ-LQHC 1000 (1370)
Q Consensus 933 r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~~-----------~g~~-~~~~ 1000 (1370)
+++++.++||++|.|+|||||.+|+.|++|++||++|++|||||+|||+||++++|+.++ ++.+ ++++
T Consensus 536 ~~~~~~v~TN~~p~ga~Rg~G~~q~~fa~Es~mDelA~~lG~DP~e~R~rN~~~~gd~~~~~~~~~~g~~~~~~~~~~s~ 615 (951)
T TIGR03313 536 DFRVTTYYSNICPTGAYQGYGAPKGNFALTMAMAELAEELGIDQLEMIETNRVHEGQELKILGAIGEGKMPTSVPKAASC 615 (951)
T ss_pred EEEEEEEECCCCCCCCcCCCCcccHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCcccccccccccccccccccccCCC
Confidence 999999999999999999999999999999999999999999999999999999998763 2223 4577
Q ss_pred CHHHHHHHHHHhcCChhhhHhhhhcccCCCcc-eeeeEEEeeeeccccccccCCceeEEEEEecCCcEEEEEcCccCCcc
Q 000657 1001 TLFPLWNELKLSCDFLNARKEVDNFNLNNRWK-KRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQG 1079 (1370)
Q Consensus 1001 ~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~-grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG 1079 (1370)
.+.+||++++++++|+++++ .+++|+ |+|+|+....+|++. .+.+.+.|+|++||+|+|.+|++|||||
T Consensus 616 ~~~~~l~~~~~~~~w~~~~~------~~g~~~~G~Gia~~~~~~g~~~----~~~~~a~v~l~~dG~v~v~~g~~e~GqG 685 (951)
T TIGR03313 616 ALEEILRQGRELIEWDSPKQ------AKGDWKIGRGVAIIMQKSGIPD----IDQANCMIKLESDGTFIVHSGGADIGTG 685 (951)
T ss_pred cHHHHHHHHHHhcCccchhh------hccCceeeeEEEEEEecccCCC----CCCccEEEEEcCCceEEEEECCCCCCcc
Confidence 89999999999999987542 235554 777776554444331 2467899999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhC-------------
Q 000657 1080 LHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH------------- 1146 (1370)
Q Consensus 1080 ~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~~------------- 1146 (1370)
+.|+++||+||+||+|+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||+..++++
T Consensus 686 ~~T~~~QiaAe~LGvp~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~Aa~~l~~kl~~~aa~~l~~~~~~~~~~~~ 765 (951)
T TIGR03313 686 LDTVVSKLTAEVLHCPMDDVHVISGDTDHALFDKGAYASSGTCFSGNAAKRAAENLREKILFHGAEMLGEPVADVDLAAP 765 (951)
T ss_pred HHHHHHHHHHHHHCCCHHhEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999998876643
Q ss_pred -------CCCCHHHHHHHhhcc--cccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEEEEEEE
Q 000657 1147 -------NFNSFAELASACYVQ--RIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVI 1217 (1370)
Q Consensus 1147 -------~~~~~~~~~~~a~~~--~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~~ 1217 (1370)
..++|++++..++.. ..++...+.|..+. .+|+|+|+++|||||++||+++|+|++++
T Consensus 766 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~a~~aeVeVD~~TG~vkv~r~~~~ 832 (951)
T TIGR03313 766 GLVRGKTGEVSYFDIAHKAETGTGFGQLVGTGSYITSE-------------FAFPYGANFAEVAVNTRTGEIRLDKFYAL 832 (951)
T ss_pred CEEeCCCCcccHHHHHHHHhccCCCCCeEEEEEecCCC-------------CCccceeEEEEEEEECCCCcEEEEEEEEE
Confidence 114688887665532 23466666664321 25789999999999999999999999999
Q ss_pred EecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeecCCCCCC
Q 000657 1218 LDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKA 1297 (1370)
Q Consensus 1218 ~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~~~~~ 1297 (1370)
+|||++|||.+++||||||++||||++|+|++.||+ +|+++|.+|++|++|++.|+|.+|++.++++ ++|.+
T Consensus 833 ~D~G~~INP~~v~gQieGg~~qGiG~AL~Ee~~~d~-------~G~~~~~~l~~Y~iPt~~D~P~~~~v~~ve~-~~~~~ 904 (951)
T TIGR03313 833 LDCGTPVNPELALGQIYGATMRAIGHSMTEEIVYDD-------NGIPLTRDLKSYGAPKIGDIPRDFRAVLVPS-DDKVG 904 (951)
T ss_pred EECCcccCHHHHHHHHHHHHHHHHHHHHhCCcEECC-------CCcCCCCChhhCCCCChHhCCCceEEEEEcC-CCCCC
Confidence 999999999999999999999999999999999998 7999999999999999999994499999997 89999
Q ss_pred CCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhc
Q 000657 1298 IHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACL 1352 (1370)
Q Consensus 1298 p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~ 1352 (1370)
|||+||+||+++++ +++||+|||++|+ |++ ++++|+|||+||++++
T Consensus 905 p~GaKGiGE~~~~~---~apAIanAI~dA~---G~r---~~~lP~tPe~vl~al~ 950 (951)
T TIGR03313 905 PYGAKSISEIGVNG---AAPAIATAIHDAC---GVW---LRDWHFTPEKILKGLN 950 (951)
T ss_pred CCCCcccCCCcccc---hHHHHHHHHHHHh---Ccc---cccCCCCHHHHHHHhh
Confidence 99999999999975 5788999999887 987 6999999999999875
|
Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity. |
| >TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-178 Score=1695.17 Aligned_cols=832 Identities=30% Similarity=0.436 Sum_probs=729.1
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEE
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHV 99 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i 99 (1370)
++|+|||+.++ ++|+++||+|||++ ||||||.||++|.|||||||||+ ++|+||++|+.+++|++|
T Consensus 1 ~~~~~ng~~~~---~~~~~~l~~~lr~~~~~~~~k~gc~~g~cgactv~~dg----------~~~~sc~~~~~~~~g~~i 67 (848)
T TIGR03311 1 YEFIVNGREVD---VNEEKKLLEFLREDLRLTGVKNGCGEGACGACTVIVNG----------KAVRACRFTTAKLAGKEI 67 (848)
T ss_pred CEEEECCEEee---CCCCCcHHHHHHHhcCCCcCCCCCCCCCCCCcEEEECC----------eEEehhhhhHHhcCCCEE
Confidence 36999998553 66999999999995 99999999999999999999996 899999999999999999
Q ss_pred EEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHHHH
Q 000657 100 ITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFA 179 (1370)
Q Consensus 100 ~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~ 179 (1370)
+|||||+ . ..+||+|+||+++|++|||||||||||++++||+++|.| +++||+++|+|||||||||++|++|++.++
T Consensus 68 ~T~egl~-~-~~~~~~q~a~~~~~~~qcG~ctpg~~~~~~~ll~~~~~p-~~~~i~~~l~gnlcrctgy~~i~~a~~~~~ 144 (848)
T TIGR03311 68 TTVEGLT-E-REKDVYAWAFAKAGAVQCGFCIPGMVISAKALLDKNPNP-TEAEIKKALKGNICRCTGYVKIIKAVRLAA 144 (848)
T ss_pred EecCCCC-C-CCCCHHHHHHHHcCCCcCCCCchhHHHHHHHHHhcCCCC-CHHHHHHHHhcCccccCChHHHHHHHHHHH
Confidence 9999998 3 357999999999999999999999999999999999999 999999999999999999999999998665
Q ss_pred hcccccccccCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCcccccccccCCCCCCCCCCCCCChhhhccC
Q 000657 180 KTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLRK 259 (1370)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~ 259 (1370)
.... +
T Consensus 145 ~~~~---------------------~------------------------------------------------------ 149 (848)
T TIGR03311 145 KAFR---------------------E------------------------------------------------------ 149 (848)
T ss_pred Hhhc---------------------c------------------------------------------------------
Confidence 2100 0
Q ss_pred CCCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEccc
Q 000657 260 SNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAA 339 (1370)
Q Consensus 260 ~~~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~ 339 (1370)
.
T Consensus 150 -------~------------------------------------------------------------------------ 150 (848)
T TIGR03311 150 -------E------------------------------------------------------------------------ 150 (848)
T ss_pred -------c------------------------------------------------------------------------
Confidence 0
Q ss_pred ccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeE
Q 000657 340 VRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIR 419 (1370)
Q Consensus 340 vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R 419 (1370)
. +
T Consensus 151 -----------~----------------------------------------------------------------~--- 152 (848)
T TIGR03311 151 -----------I----------------------------------------------------------------E--- 152 (848)
T ss_pred -----------c----------------------------------------------------------------c---
Confidence 0 0
Q ss_pred EEehhHhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCC
Q 000657 420 TTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVA 499 (1370)
Q Consensus 420 ~vpl~dF~~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva 499 (1370)
++. ..
T Consensus 153 -----------------------------~~~------------------------------~~---------------- 157 (848)
T TIGR03311 153 -----------------------------PPR------------------------------GE---------------- 157 (848)
T ss_pred -----------------------------ccc------------------------------cc----------------
Confidence 000 00
Q ss_pred CccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhhccCCCCcccCCCcc
Q 000657 500 PLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKESVPST 579 (1370)
Q Consensus 500 ~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~~~~~~~~~~~~~~~ 579 (1370)
T Consensus 158 -------------------------------------------------------------------------------- 157 (848)
T TIGR03311 158 -------------------------------------------------------------------------------- 157 (848)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCCCccccccccccCCCCccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhc
Q 000657 580 HLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGA 659 (1370)
Q Consensus 580 ~~s~~~~~~r~~~~g~q~~~~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A 659 (1370)
.. ..||++++|+|+.+||||+++|++|+.+ |||||++++|||++||+|++||+|+|
T Consensus 158 ----------------------~~-~~iG~~~~R~d~~~kvtG~~~Y~~Di~~-pgmL~a~~vrSp~ahA~I~~ID~s~A 213 (848)
T TIGR03311 158 ----------------------PK-GKLGENFPRVDAVPKVLGEGVYVDDMQI-EGMLYGSALRSKYPRALVKSIDITVA 213 (848)
T ss_pred ----------------------cc-CCCCCccCCcChhhhCcccccccccCCC-CCCEEEEEEeCCCCCEEEEeeEHHHH
Confidence 00 1389999999999999999999999998 79999999999999999999999999
Q ss_pred cCCCCEEEEEecCCCCCCCCCCCCCccccc-cc-cCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHH
Q 000657 660 RSSPGFVGIFFAEDVQGDNRIGPVVADEEL-FA-SEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAI 737 (1370)
Q Consensus 660 ~~~pGVv~Vvt~~Dipg~n~~g~~~~d~~~-la-~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~ 737 (1370)
++||||++|+|++|+|+.+.+|....+++. |+ +++|||+|||||+|+|+|+++|++|+++|+|+||+||+++|+++|+
T Consensus 214 ~a~PGV~aVvt~~Dip~~~~~g~~~~~~~~~~a~~~~Vry~Ge~VA~VvA~t~~~A~~A~~~V~Veye~lp~v~d~~~A~ 293 (848)
T TIGR03311 214 LKHPGVVAVLTAKDIPGNRKIGHIFKDWPALIAVGEITRYVGDAVALVAAKSKEALREALNLIKVDYEELPPLTSPEEAL 293 (848)
T ss_pred HhCCCcEEEEeHHHCCCccCCCCCCCCccccccCCCEEEEcCCeEEEEEECCHHHHHHHhCCCcEEEecCCCcCCHHHHh
Confidence 999999999999999975555655555553 44 5899999999999999999999999999999999999999999999
Q ss_pred hccC--CCC--C--CccccccCCcccccccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHH
Q 000657 738 DAKS--FHP--N--TERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQ 811 (1370)
Q Consensus 738 ~~~a--~~~--~--~~~~~~~Gdv~~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r 811 (1370)
++++ +|+ | ....+.+||++++| ++|++|||++|++++|+|+||||++|+|+|+ +|+|+||+|||+|+.+|
T Consensus 294 ~~~a~~i~~~~Nv~~~~~~~~Gdv~~af--~~A~~vve~~y~~~~~~h~~mEp~~~vA~~~--~~~l~v~~stQ~p~~~r 369 (848)
T TIGR03311 294 AEGAPAIHPKGNILSEEHVVRGDAEEAL--ENSAYVVTNHYSTPFTEHAFLEPESALAVPE--GDGVIIYTSTQGVYDEQ 369 (848)
T ss_pred cCCCCeECCCCCCcceeeecCCCHHHHh--hcCCeEEEEEEEECCEeeeecCCceEEEEEe--CCeEEEEECCcCHHHHH
Confidence 8876 343 1 12346789999999 9999999999999999999999999999997 56799999999999999
Q ss_pred HHHHHHhCCCCCcEEEEecccCCCCCCCCccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCC
Q 000657 812 KYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNE 891 (1370)
Q Consensus 812 ~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~d 891 (1370)
..+|++||||++||||+.+++|||||+|.+.. .+..||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+|
T Consensus 370 ~~vA~~Lglp~~~VrV~~~~vGGgFG~K~~~~--~~~~aA~~A~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~d 447 (848)
T TIGR03311 370 RELASLLGLPKEKIRVINKFVGGGFGGKEDMS--VQHHAALLAWATKRPVKVTLTRKESILVHPKRHAMEMTFTTGCDEA 447 (848)
T ss_pred HHHHHHhCCChHHEEEEeCCCCCcCCcccccc--HHHHHHHHHHHhCCCEEEEechHHhhhccCCCCceEEEEEEEECCC
Confidence 99999999999999999999999999999853 4568999999999999999999999999999999999999999999
Q ss_pred CcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHH
Q 000657 892 GKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVE 971 (1370)
Q Consensus 892 G~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~ 971 (1370)
|+|+|++++++.|+|+|.+++..++.++..++.++|+|||++++++.|+||++|.|+|||||.+|++|++|++||++|++
T Consensus 448 G~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~pq~~fa~E~~mD~lA~~ 527 (848)
T TIGR03311 448 GNLTAMKADIIADTGAYASLGGPVLQRACTHAAGPYKYPNVDIRGTAVYTNNPPAGAFRGFGVTQSNFAMECNLNLLAEK 527 (848)
T ss_pred CcEEEEEEEEEEccccCCCccHHHHHHHHHhcCCCccCceEEEEEEEEECCCCCCCCccCCChhHHHHHHHHHHHHHHHH
Confidence 99999999999999999988777788888889999999999999999999999999999999999999999999999999
Q ss_pred hCCCHHHHHHHhcCCCCCccccCcccc-CCCHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccc
Q 000657 972 VRKSPEEIREINFQGEGSILHYGQQLQ-HCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLK 1050 (1370)
Q Consensus 972 lg~DP~e~Rl~Nl~~~g~~~~~g~~~~-~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~ 1050 (1370)
|||||+|||++|++++|+.+++|+.++ +..+++||+++++. |++ ++++|+++.....|++..
T Consensus 528 lg~DP~E~R~rN~~~~gd~~~~g~~~~~~~~~~~~l~~~~~~--~~~-------------~~~~G~~~~~~~~g~~~~-- 590 (848)
T TIGR03311 528 VGLSPWEIRFKNAVEPGDTLPNGQVVSEGTAIKETLLAVKEV--YEK-------------SPCAGIACAFKNSGVGVG-- 590 (848)
T ss_pred hCcCHHHHHHHhCCCCCCcCCCCceeCCCchHHHHHHHHHHH--hhh-------------ccCCeEEEEEEEeccccC--
Confidence 999999999999999999999999997 55699999999874 431 135688776655555431
Q ss_pred cCCceeEEEEEecCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHH
Q 000657 1051 LMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLD 1130 (1370)
Q Consensus 1051 ~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~ 1130 (1370)
..+.+.+.+.++ ||+|+|.+|++|||||++|+++|||||+||||+|+|+|..+||+.+|++++|+|||+|+++|+||++
T Consensus 591 ~~~~~~~~~~~~-DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~aSR~t~~~G~Av~~ 669 (848)
T TIGR03311 591 IPDTGRCNLAVE-DGKVHIRTSAACIGQGLGTVLTQIVCETTGLPPEVIVCELPDTALTPDSGTTTASRQSLFTGEATRR 669 (848)
T ss_pred CCCcceEEEEEc-CCEEEEEECCCCcCcCHHHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCchhhHHHHHHHHHHH
Confidence 123456777777 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhCCCCCHHHHHHHhhccc-----ccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCC
Q 000657 1131 ACEQIKARMEPIASKHNFNSFAELASACYVQR-----IDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTL 1205 (1370)
Q Consensus 1131 Ac~~L~~rl~~~a~~~~~~~~~~~~~~a~~~~-----~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~ 1205 (1370)
||++||+||++. .|.++....+... .++...+.| ..++..|+|+++++|| | +
T Consensus 670 Aa~~l~~~l~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~eV--d-~ 726 (848)
T TIGR03311 670 AAAKLKEALRGR-------TLAELEGEEFYGEYHSITDPLNSDKEN-------------PVSHVGYGYATQVVIL--D-D 726 (848)
T ss_pred HHHHHHHHHHhc-------CHHHcCCCEEeeccccccCcceeeccC-------------CCCccccceEEEEEEE--C-C
Confidence 999999999742 3444311111000 001111110 1122345566666655 6 8
Q ss_pred CCcEEEEEEEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeE
Q 000657 1206 TGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFN 1285 (1370)
Q Consensus 1206 TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~ 1285 (1370)
|| +|+|+++++|||++|||.+++||||||++||||++|+|++.|| +|++++ +|++|++|++.|+|+ |+
T Consensus 727 tG--~v~r~~~v~D~G~vINP~~veGQieGG~~qGlG~AL~Ee~~~d--------~G~~~~-~~~dY~iPt~~D~P~-i~ 794 (848)
T TIGR03311 727 AG--KVEKVVAAYDVGRAINPLNLEGQIEGGIVMGLGYALTEDFPLR--------EGIPTA-KFGTLGLFRSTQVPE-IE 794 (848)
T ss_pred CC--eEEEEEEEEeCCccCCHHHHHHHHHHHHHHHHHHHhcCcEEec--------CCeecC-ChhhccCCChhhCCC-eE
Confidence 99 5779999999999999999999999999999999999999996 499887 599999999999996 99
Q ss_pred EEEeecCCCCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q 000657 1286 VSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1348 (1370)
Q Consensus 1286 v~~~~~~~~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~ 1348 (1370)
++++|+ ++|.+|||+||+||+++++ +++||+|||++|+ |+| ++++|+|||+||
T Consensus 795 v~~ve~-~~~~~p~GaKGvGE~~~~~---~~~AIanAV~~A~---G~r---~~~lP~~p~~v~ 847 (848)
T TIGR03311 795 THLIEK-NGTPLAYGAKGVGELATIP---TAPAVAGAYYRFD---GKF---RLSLPLENTPYT 847 (848)
T ss_pred EEEEeC-CCCCCCCCCccCCCCcccc---hHHHHHHHHHHhH---CcC---cccCCCCccccc
Confidence 999997 9999999999999999975 6789999999998 997 799999999986
|
Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme. |
| >TIGR02965 xanthine_xdhB xanthine dehydrogenase, molybdopterin binding subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-154 Score=1471.75 Aligned_cols=734 Identities=47% Similarity=0.752 Sum_probs=673.9
Q ss_pred cCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCCCCCCCcc
Q 000657 607 VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVAD 686 (1370)
Q Consensus 607 iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~g~~~~d 686 (1370)
|||+++|+|+..||||+++|++|+..+|||||++++|||++||+|++||+|+|+++|||++|+|++|+|+.|.++....+
T Consensus 1 ~G~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~~iD~s~A~~~pGV~~V~t~~D~p~~~~~g~~~~~ 80 (758)
T TIGR02965 1 VGTSLKHESAHKHVAGTAVYIDDIPEPAGTLHAALGLSTRAHARITSMDLSAVRAAPGVVDVLTAADIPGENDISPIIHD 80 (758)
T ss_pred CCCCccCcchHhhCceeeEcccCCCCCCCCEEEEEEecCCCceEEeecchHHHhcCCCcEEEEEHHHCCCCCCCCCCCCC
Confidence 69999999999999999999999963389999999999999999999999999999999999999999977666666678
Q ss_pred ccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccCCCCCCccccccCCcccccccCCCcc
Q 000657 687 EELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDK 766 (1370)
Q Consensus 687 ~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a~~~~~~~~~~~Gdv~~af~~~~a~~ 766 (1370)
+|+|++++|||+|||||+|+|+|+++|++|+++|+|+||+||+++|+++|+++++...+....+.+||++++| ++|++
T Consensus 81 ~~~la~~~Vry~Ge~va~VvA~~~~~A~~A~~~i~V~ye~lp~v~d~~~Al~~~a~~~~~~~~~~~Gd~~~af--~~a~~ 158 (758)
T TIGR02965 81 DPLLADGKVEFVGQPIFAVIATSRDAARRAARLAKIEYEELPAVLDIEEALAAGSRFVTPPLTLERGDAEAAL--AAAPH 158 (758)
T ss_pred ceeccCCEEEEcCCeEEEEEECCHHHHHHHhhccEEEEEcCCccCCHHHHhcCCCCcccCcccccCCCHHHHH--hhCCE
Confidence 9999999999999999999999999999999999999999999999999998876322123456889999999 99999
Q ss_pred EEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCccchHH
Q 000657 767 IIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFI 846 (1370)
Q Consensus 767 vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~~~ 846 (1370)
+||++|++++|+|++|||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||||+.+++|||||+|.+...++
T Consensus 159 vve~~y~~~~~~h~~mEp~~~vA~~~-~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~~~~ 237 (758)
T TIGR02965 159 RLSGEMRIGGQEHFYLEGQIALAVPG-EDGGMHVWSSTQHPSEVQHLVAHVLGVPSHAVTVEVRRMGGGFGGKETQANLF 237 (758)
T ss_pred EEEEEEEECCEeEEecCCceEEEEEc-CCCCEEEEECCCChHHHHHHHHHHhCCChHHEEEEeCCCccCccccccccchH
Confidence 99999999999999999999999997 46789999999999999999999999999999999999999999999864455
Q ss_pred HHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccCCC
Q 000657 847 AAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNV 926 (1370)
Q Consensus 847 ~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~ 926 (1370)
++.||++|+++||||||+|||+|+|+.+.+||++.+++|+|+|+||+|++++++++.|+|+|.+.+..++.++.....++
T Consensus 238 ~~~aa~~A~~~grPVk~~~sR~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~~~ 317 (758)
T TIGR02965 238 ACLAAVAARKTGRPVKLRPDRDDDMMITGKRHDFLVDYDVGFDDEGRILGVDIDMAARCGFSADLSGPVTDRALFHADNA 317 (758)
T ss_pred HHHHHHHHHHHCCCEEEEechHHhhhhccCccceEEEEEEEECCCCCEEEEEEEEeecCcccCCcchHHHHHHHHhcCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999876666777777788999
Q ss_pred cccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCcc--ccCccccCCCHHH
Q 000657 927 YEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSIL--HYGQQLQHCTLFP 1004 (1370)
Q Consensus 927 Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~--~~g~~~~~~~l~~ 1004 (1370)
|+|||++++++.|+||++|+|+|||||.+|+.|++|++||++|++|||||+|||++|++++|+.+ ++|+.+++..+++
T Consensus 318 Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~Nl~~~g~~~~~~~g~~~~s~~~~~ 397 (758)
T TIGR02965 318 YFLPDVTITSHPLKTNTQSNTAFRGFGGPQGMVAIERIMDEVARALGKDPLEVRKRNFYGKDERNVTPYHQTVEDNIIHE 397 (758)
T ss_pred ccCCceEEEEEEEEcCCCCCccccCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHcCCCCCCCCcCCCceeccCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988776 6799999999999
Q ss_pred HHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEEEEEecCCcEEEEEcCccCCcchHHHH
Q 000657 1005 LWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKV 1084 (1370)
Q Consensus 1005 ~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~ 1084 (1370)
||+++++.++|+++++..++||..++|++||+++++..||.++.....+++++.|+|++||+|+|.+|.+|||||++|++
T Consensus 398 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rGiG~a~~~~g~~~~~~~~~~~~a~v~i~~dG~v~v~~g~~e~GQG~~T~l 477 (758)
T TIGR02965 398 IIEELEESSDYAARRAAIRAFNAASPVLKKGIALTPVKFGISFTVTHLNQAGALVHVYTDGSIHLNHGGTEMGQGLNTKV 477 (758)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCceeEEEEeeeeccccccccccCccceEEEEeCCCcEEEEECCCCCCCCHHHHH
Confidence 99999999999998877777777788888999999888887654222346789999999999999999999999999999
Q ss_pred HHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhC------------------
Q 000657 1085 AQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH------------------ 1146 (1370)
Q Consensus 1085 ~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~~------------------ 1146 (1370)
+||+||+||||+|+|+|..+||+.+|++++|+|||+|.+.|.||++||++||+||+++++++
T Consensus 478 aQIaAe~LGi~~d~V~v~~~DT~~~p~~~gT~gSr~t~~~g~Av~~Aa~~lr~~l~~~Aa~~l~~~~~~l~~~~g~v~~~ 557 (758)
T TIGR02965 478 AQVVAEEFQVDIDRVKITATDTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFAAEKWQVPAEDVRFAPNHVRVG 557 (758)
T ss_pred HHHHHHHhCCCHHHEEEEecCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEECCEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999987764
Q ss_pred -CCCCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEEEEEEEEecCcccC
Q 000657 1147 -NFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLN 1225 (1370)
Q Consensus 1147 -~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~~~D~G~~iN 1225 (1370)
...+|.+++..++....+|.++++|..+...++..++.+.++.+|+||+|++|||||++||+++|+|+++++|||++||
T Consensus 558 ~~~~~~~~l~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~v~~~~~~~D~G~~iN 637 (758)
T TIGR02965 558 EQRVPFAELVQQAYFARVQLSSTGFYKTPKIHWDRAKGRGRPFYYFAYGAACSEVSVDTLTGEYKVLRADILHDVGRSLN 637 (758)
T ss_pred CCccCHHHHHHHHhhcCCCcEEEEEEcCCCccccccccCCCCcceeeeeEEEEEEEEecCCCcEEEEEEEEEEecCCcCC
Confidence 1268999998887656679999998766544444444555655789999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeec-CCCCCCCCCCCcC
Q 000657 1226 PAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKG-HPNVKAIHSSKAV 1304 (1370)
Q Consensus 1226 P~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~-~~~~~~p~gaKGv 1304 (1370)
|.+++|||+||++||||++|+|++.||+ +|+++|.||++|++|++.|||++|++.++|. .++|.+|||+||+
T Consensus 638 P~~~~GQi~Gg~~qGiG~aL~E~~~~d~-------~G~~l~~~~~dY~iPta~DiP~~~~~~~~e~~~~~~~~p~GaKGv 710 (758)
T TIGR02965 638 PAIDIGQVEGGFVQGMGWLTTEELVWDE-------KGRLRTHAPSTYKIPAASDRPKDFNVRLFEWSENREDTIHRSKAV 710 (758)
T ss_pred HHHhhhhhhhhhhhhhhHhhccceEECC-------CcCCcCCCCcCcCCCChhhCCCccEEEEecCCCCCCCCCcCCccc
Confidence 9999999999999999999999999998 8999999999999999999994499999983 2456899999999
Q ss_pred CCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000657 1305 GEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1353 (1370)
Q Consensus 1305 GE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~~ 1353 (1370)
||++++++++|++||+|||++|+ |++.|+.+++|+|||+||++|++
T Consensus 711 GE~~~~~~aav~~AI~nAi~~a~---g~~~~~~~~lP~tpe~v~~al~~ 756 (758)
T TIGR02965 711 GEPPLMLGISVLFAISDAVASVA---DYRVCPRLDAPATPERVLMAVEA 756 (758)
T ss_pred CccchhhHHHHHHHHHHHHHHhh---ccCCCCCCCCCCCHHHHHHHHHh
Confidence 99999987789999999999998 88866779999999999999865
|
Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase. |
| >COG4631 XdhB Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-153 Score=1295.84 Aligned_cols=735 Identities=47% Similarity=0.733 Sum_probs=704.3
Q ss_pred CccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCCCCCCC
Q 000657 605 TSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVV 684 (1370)
Q Consensus 605 ~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~g~~~ 684 (1370)
..||.+.++-.+...|+|+|.|+|||+.|+|.||+++-.|+++||||+++|.+++++.|||+.|+|++|+||.|..++..
T Consensus 17 ~~v~~~~~HeSAhkHV~GtA~YiDD~pepag~LH~~~gls~~aHAri~~mDl~~v~a~PGVv~vlta~DvPGenDisp~~ 96 (781)
T COG4631 17 GGVGTSLRHESAHKHVTGTAVYIDDIPEPAGTLHGALGLSERAHARITRMDLSAVRAAPGVVDVLTAADVPGENDISPVK 96 (781)
T ss_pred CcccccccccchhhcccceeEEecCCCCcccchhhhccccccchheeeecchHHhhcCCCeEEEEEecCCCCCCCCCccc
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred ccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccCCCCCCccccccCCcccccccCCC
Q 000657 685 ADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQC 764 (1370)
Q Consensus 685 ~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a~~~~~~~~~~~Gdv~~af~~~~a 764 (1370)
+|+|+|++++|.|+||||-+|+|+|.++|++|+++.+|+||+||+++|+.+|+..+.+.. ....+++||.+.+| +.|
T Consensus 97 hddpl~a~gkVef~GQ~vfaV~A~s~e~ARraA~~a~ieYe~lp~~~di~~a~a~~~~v~-~p~~l~rGD~~a~~--~~A 173 (781)
T COG4631 97 HDDPLLADGKVEFHGQPVFAVIAESREAARRAARLAKIEYEDLPPVTDIDEAIAAGRLVT-PPLTLKRGDAAAAL--AAA 173 (781)
T ss_pred CCCccccCceEEEccceEEEEeehhHHHHHHHHHhhhcccccCCccCCHHHHhhcccccC-Cchhhcccchhhhh--hhC
Confidence 999999999999999999999999999999999999999999999999999998886543 45678999999999 999
Q ss_pred ccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCccch
Q 000657 765 DKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSA 844 (1370)
Q Consensus 765 ~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~~~ 844 (1370)
.+.++++++++.|+|||||.+.++|.|. |||.++||+|||.|..+|..+|++||+|.+.|.|...|+|||||||++...
T Consensus 174 p~r~~G~~~iGGQehFYLEgqia~a~p~-Ed~~v~v~~STQhPtE~Q~~vahvLGvpsn~VtV~~rRMGGGFGGKEtQ~~ 252 (781)
T COG4631 174 PHRLQGEMRIGGQEHFYLEGQIALAVPG-EDGDVTVWSSTQHPTEVQHLVAHVLGVPSNAVTVEVRRMGGGFGGKETQAN 252 (781)
T ss_pred chhheeeEEEcCeeeEEEeeeeeEeccC-CCCCEEEEecCCCcHHHHHHHHHHhCCCcceEEEEEEeecCCcCcccccch
Confidence 9999999999999999999999999997 788999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhccC
Q 000657 845 FIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSD 924 (1370)
Q Consensus 845 ~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~ 924 (1370)
.+++.||++|+|++||||+..+|.|||++++|||+++..|++|||.||+|+++++.+..++|++.++|.+++++++.|++
T Consensus 253 ~fAa~aA~aA~k~~r~vk~RpdRdeDm~~TGKRHdF~v~y~vGfDdeGri~~v~~~~aarcGfS~DLSgpV~dRAlfH~D 332 (781)
T COG4631 253 QFAALAALAAKKTGRPVKIRPDRDEDMTATGKRHDFHVDYEVGFDDEGRILGVDATLAARCGFSADLSGPVTDRALFHAD 332 (781)
T ss_pred HHHHHHHHHHHHhCCceeecCCcchhhhhccCcCceEEEeeeccCCCCcEEEeeeehhhccCcccccCccchhhheeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCC--ccccCccccCCCH
Q 000657 925 NVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGS--ILHYGQQLQHCTL 1002 (1370)
Q Consensus 925 ~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~--~~~~g~~~~~~~l 1002 (1370)
+.|.+|++.+.++..+||+.++++|||||.||+++++|++||++|..||+||+|+|++|++.++. .|||+|.+++..+
T Consensus 333 NaYf~p~v~~~s~~~kTntvSnTAfRGFGGPQGm~~~Eriid~vA~alGkdpleiRk~NfYg~~~~n~TpYhQ~Vednii 412 (781)
T COG4631 333 NAYFYPHVHILSRPLKTNTVSNTAFRGFGGPQGMLGIERIIDEVAYALGKDPLEIRKLNFYGKDGRNVTPYHQTVEDNII 412 (781)
T ss_pred cceeccceeeecceeeccccccccccccCCcchhhHHHHHHHHHHHHhCCCHHHHHhhhccCCCCCccCccccchHHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999998766 6899999999999
Q ss_pred HHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEEEEEecCCcEEEEEcCccCCcchHH
Q 000657 1003 FPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHT 1082 (1370)
Q Consensus 1003 ~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T 1082 (1370)
.++|+++...++|..|++++..||+..+..||||++.|.+||++|+....||++|+|+||.||||.+.||++|||||++|
T Consensus 413 ~ri~~ELeaSsdyaaRr~~i~aFNa~spv~krGlAlTPVKFGISFt~t~~NQAGALVHvY~DGSi~lNHGGTEMGQGL~t 492 (781)
T COG4631 413 ARIVDELEASSDYAARREAIRAFNAASPVIKRGLALTPVKFGISFTATHYNQAGALVHVYTDGSIHLNHGGTEMGQGLYT 492 (781)
T ss_pred HHHHHHHHhcchHHHHHHHHHHhhccChhhhccccccceeeeEEEeeeeeccCceEEEEeccCeEEEcCCCcccccchhH
Confidence 99999999999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhC----------------
Q 000657 1083 KVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH---------------- 1146 (1370)
Q Consensus 1083 ~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~~---------------- 1146 (1370)
+++||+|++|+|++++|+|..++|+++||++.|.+|.+++++|+|+++||++||+||..+++.-
T Consensus 493 KvaQVvA~~fqvd~~rVkitaT~T~KVpNTSaTAASSGsDLNGmAa~dAa~qIk~RLv~fAA~~~~V~~~~v~F~~n~vr 572 (781)
T COG4631 493 KVAQVVAEEFQVDIDRVKITATTTDKVPNTSATAASSGSDLNGMAAQDAARQIKERLVAFAAEHWGVPEEDVAFLPNRVR 572 (781)
T ss_pred HHHHHHHHHhCcccceEEEeccccCCCCCCccccccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCCHHHeEecCCeeE
Confidence 9999999999999999999999999999999999999999999999999999999999998863
Q ss_pred ---CCCCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEEEEEEEEecCcc
Q 000657 1147 ---NFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYS 1223 (1370)
Q Consensus 1147 ---~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~~~D~G~~ 1223 (1370)
..+.|+++++.+|..++.|++.|+|++|++.||...+.|.||.||+|||.++||+||++||+.+++|.++.||+|++
T Consensus 573 ig~~~~~F~~lv~~AY~arvqLsaaGFY~TPkihwdra~~~G~PFyYFaYGAacSEV~vDtlTGey~~~R~DiLHDvG~S 652 (781)
T COG4631 573 IGGQELAFADLVKQAYFARVQLSAAGFYKTPKIHWDRAAGRGRPFYYFAYGAACSEVSVDTLTGEYKVERTDILHDVGRS 652 (781)
T ss_pred EcceecCHHHHHHHHhheeeeeeccccccCCccccchhhcCCCceEEEeecceeeeEEEecccceEEEEeehhhhhhhhh
Confidence 13699999999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred cCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeecCCC-CCCCCCCC
Q 000657 1224 LNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPN-VKAIHSSK 1302 (1370)
Q Consensus 1224 iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~~-~~~p~gaK 1302 (1370)
|||.++.|||||||+||+||.++||+.||+ .|+|.|..+++||||.+.|.|.+|+|.+.+...+ ..+.++||
T Consensus 653 LNpaiDlGQiEGgFvQGmGWLTtEeL~wd~-------kGRlrThapSTYKiP~~sdrP~~f~V~L~~~~~n~e~ti~rSK 725 (781)
T COG4631 653 LNPAIDLGQIEGGFVQGMGWLTTEELWWDE-------KGRLRTHAPSTYKIPLASDRPKIFNVRLAEWSENAEPTIHRSK 725 (781)
T ss_pred cccccccccccchhcccccccchhhheecc-------CCCeeecCCccccCcccccCchheeeehhcccccccccccccc
Confidence 999999999999999999999999999998 7999999999999999999999999999986333 35789999
Q ss_pred cCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000657 1303 AVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1353 (1370)
Q Consensus 1303 GvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~~ 1353 (1370)
.+||||++++.||..||++|++.- .+.++ ....+.|+|||+|++++.+
T Consensus 726 AVGEPPlmL~iSV~~Al~~AvAsv-aD~r~--~p~ldaPATpErVlmave~ 773 (781)
T COG4631 726 AVGEPPLMLGISVLEALSDAVASV-ADYRV--CPRLDAPATPERVLMAVER 773 (781)
T ss_pred ccCCCCcchhHHHHHHHHHHHHHh-cccCc--CCCCCCCCCHHHHHHHHHH
Confidence 999999999989999999999765 34343 3468999999999999854
|
|
| >TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-147 Score=1400.16 Aligned_cols=709 Identities=25% Similarity=0.331 Sum_probs=635.3
Q ss_pred ccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCCCCCCCcccccc
Q 000657 611 EVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELF 690 (1370)
Q Consensus 611 ~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~g~~~~d~~~l 690 (1370)
++|+|+..||||+++|++|+.+ |||||++++|||++||+|++||+++|+++|||++|+|++|+|..........|+|+|
T Consensus 1 ~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~vvrSp~ahA~I~siD~s~A~a~pGV~~V~t~~D~p~~~g~~~~~~d~~~l 79 (746)
T TIGR03194 1 VPLVDGVEKVTGKAKYTADLAA-PGALVGRILRSPHAHARILAIDTSEAEALPGVIAVVTGADCPVPYGVLPIAENEYPL 79 (746)
T ss_pred CcCcchHhhCccccccccCCCC-CCCEEEEEEecCCccEEEeeccHHHHHhCCCcEEEEeHHHCCcccCCCCCCCCCccC
Confidence 4799999999999999999998 799999999999999999999999999999999999999998521111223589999
Q ss_pred ccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccCC--CCCC------ccccccCCcccccccC
Q 000657 691 ASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF--HPNT------ERCFRKGDVDICFQSG 762 (1370)
Q Consensus 691 a~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a~--~~~~------~~~~~~Gdv~~af~~~ 762 (1370)
++++|||+|||||+|+|+|+++|++|+++|+|+||+||+++|+++|+++++. |++. ...+.+||++++| +
T Consensus 80 a~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Veye~lp~v~d~~~Al~~~a~~ih~~~~~Nv~~~~~~~~Gd~~~a~--~ 157 (746)
T TIGR03194 80 ARDKVRYRGDPVAAVAAVDEVTAEKALALIKVEYEELPAYMDPKAAMKAGAILLHDNKPGNIEREVHNEFGDVAAAF--A 157 (746)
T ss_pred CCCeEEEcCCeEEEEEECCHHHHHHHhcCCcEEEecCCCcCCHHHHhcCCCCccCCCCCCcEEEEEeeccCCHhHHh--c
Confidence 9999999999999999999999999999999999999999999999988763 4311 1346789999999 9
Q ss_pred CCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCCCcc
Q 000657 763 QCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETR 842 (1370)
Q Consensus 763 ~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK~~~ 842 (1370)
+|+++||++|++++|+|++|||++|+|+|++++|+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+.
T Consensus 158 ~a~~vve~~~~~~~~~h~~mEp~~~~A~~~~~~~~l~v~~stQ~p~~~r~~va~~Lglp~~kVrV~~~~vGGgFG~K~~~ 237 (746)
T TIGR03194 158 EADLIREKTFTCAEVNHAHMEPNATLAEYDPVRGMLTLNSVTQVPYYVHLKLARCLQMDSARIRVIKPFLGGGFGARVEP 237 (746)
T ss_pred cCCEEEEEEEEECCEeEEccCCCeEEEEEeCCCCeEEEEECCCchHHHHHHHHHHhCCCHHHeEEEcCCCcCcccccccc
Confidence 99999999999999999999999999999844578999999999999999999999999999999999999999999875
Q ss_pred chHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHHhhc
Q 000657 843 SAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFH 922 (1370)
Q Consensus 843 ~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~ 922 (1370)
.++++.||++|+++||||||+|||+|+|..+.+||++.+++|+|+|+||+|+|++++++.|+|+|.+++..++......
T Consensus 238 -~~~~~~aal~a~~~grPVk~~~~ReE~~~~~~~R~~~~~~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~ 316 (746)
T TIGR03194 238 -LNFEIIAGLLARKAKGTVRLLQTREETFITHRGRPQTYVKMKIGLKKDGKITACAAEVVQRGGAYAGYGIVTILYAGAL 316 (746)
T ss_pred -chHHHHHHHHHHHhCCCEEEecchhhhhhcCCCCCceEEEEEEEECCCCeEEEEEEEEeecccccCCcchHHHHHHHHh
Confidence 3467899999999999999999999999999999999999999999999999999999999999998887777777778
Q ss_pred cCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCccccCccccCCCH
Q 000657 923 SDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTL 1002 (1370)
Q Consensus 923 ~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~~~g~~~~~~~l 1002 (1370)
+.++|+|||++++++.|+||++|+|+|||||.+|+.||+|++||++|++|||||+|||+||+++.|+.+++|+.++++++
T Consensus 317 ~~g~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~lA~~lg~DPve~R~~N~~~~~~~~~~g~~~~s~~~ 396 (746)
T TIGR03194 317 LHGLYDIPAVKYDGYRVYTNTPPCGAMRGHGTVDTRAAFESLLDEMAAELGIDPFAIRRRNLLQAPTVTMNDLRVMSYGL 396 (746)
T ss_pred cCCCcccceEEEEEEEEEcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCcCCCCCCCCCceecCCCH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeecccccc----ccCCceeEEEEEecCCcEEEEEcCccCCc
Q 000657 1003 FPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTL----KLMNQAGALVHVYTDGTVLVTHGGVEMGQ 1078 (1370)
Q Consensus 1003 ~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~----~~~~~~~a~V~l~~DGsV~V~~g~~e~Gq 1078 (1370)
++||++++++++|++|++.. +++||++++...++.+... ...+.+++.|++++||+|+|.+|++||||
T Consensus 397 ~~~l~~~~e~~~w~~~~~~~--------~~~rGiG~a~~~~~~~~~~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~e~Gq 468 (746)
T TIGR03194 397 PECLEKVEQASGWEERKGRL--------PKGRGLGIACSHFVSGSAKPIHFTGEPHATVALKLDFDGGITLLTGAADIGQ 468 (746)
T ss_pred HHHHHHHHHhcCchhhhhhc--------cccEEEEEEEEEEeccCCcccccCCCCCceEEEEEcCCccEEEEEcCCCCCC
Confidence 99999999999998765421 1234555554444332211 11346889999999999999999999999
Q ss_pred chHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhC------------
Q 000657 1079 GLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH------------ 1146 (1370)
Q Consensus 1079 G~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~~------------ 1146 (1370)
|++|+++|||||.||+|+|+|+|..+||+.+|++++|+|||+|++.|.||++||++||+||+++++++
T Consensus 469 G~~T~~~qiaAe~LGip~d~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~ 548 (746)
T TIGR03194 469 GSSTIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNAAIDAAEELKGVLVAAAAKKLDAREEDIECAG 548 (746)
T ss_pred CHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999997753
Q ss_pred ----------CCCCHHHHHHHhhcccccceEEEEeecCCccccccC--CCCC-CcccccEEEEEEEEEeeCCCCcEEEEE
Q 000657 1147 ----------NFNSFAELASACYVQRIDLSAHGFYITPEIDFDWIT--GKGN-PFRYFTYGAAFAEVEIDTLTGDFHTRM 1213 (1370)
Q Consensus 1147 ----------~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~--~~~~-~~~~~~~ga~~aeVeVD~~TG~v~V~r 1213 (1370)
...+|.+++..++.....+..+++|..+. .+.+.. ..+. ...+|+|+|+++|||||++||+++|+|
T Consensus 549 g~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~aeVeVD~~TG~v~v~~ 627 (746)
T TIGR03194 549 EMFFVSGSADPGLSFQEVVKAALVDSGTITVKGTYTCPP-EFQGGKKRGGAVGSTMGFSYAAQVVEVSVDEETGKVTVHK 627 (746)
T ss_pred CEEEECCCCCCceeHHHHHHHhcccCCCceEEEEecCCC-ccccccccccccCcccccceeEEEEEEEEECCCCCEEEEE
Confidence 12579999866665455688888886332 111110 0010 123689999999999999999999999
Q ss_pred EEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeecCC
Q 000657 1214 ANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHP 1293 (1370)
Q Consensus 1214 ~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~ 1293 (1370)
+++++|||++|||.+++||||||++||||++|+|++.|| +|+++|.||++|++|++.|+|+ ++++++|+ +
T Consensus 628 ~~~~~D~G~viNP~~v~gQi~Gg~~~GiG~aL~E~~~~d--------~G~~~~~~l~~Y~ipt~~d~P~-i~v~~ve~-~ 697 (746)
T TIGR03194 628 VWVAVDCGKAINPLAVEGQVQGAVWMGMGQALSEETVYD--------NGRMKHASLLDYRVPTIVESPD-IEVIIVES-M 697 (746)
T ss_pred EEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHhcCceEec--------CCeECCCChhhccCCChhccCC-eEEEEEeC-C
Confidence 999999999999999999999999999999999999998 4999999999999999999995 99999997 8
Q ss_pred CCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHh
Q 000657 1294 NVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMAC 1351 (1370)
Q Consensus 1294 ~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~ 1351 (1370)
++.+|||+||+||+++++ +++||+|||++|+ |+| ++++|+|||+||++|
T Consensus 698 ~~~~p~Gakg~GE~~~~~---~~~AIanAI~~A~---G~r---~~~lP~tpe~v~~al 746 (746)
T TIGR03194 698 DPNGPFGAKEASEGALAG---FLPAIHNAVYDAV---GVR---ATDLPLTPDRVTEAL 746 (746)
T ss_pred CCCCCCCCCcCCCCcccc---hHHHHHHHHHHhh---CCC---cccCCCCHHHHHhhC
Confidence 999999999999999974 6899999999998 987 699999999999875
|
This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA. |
| >PRK09970 xanthine dehydrogenase subunit XdhA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-147 Score=1406.45 Aligned_cols=709 Identities=27% Similarity=0.377 Sum_probs=642.0
Q ss_pred ccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCC--CCC-
Q 000657 606 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR--IGP- 682 (1370)
Q Consensus 606 ~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~--~g~- 682 (1370)
.|||+++|+|+..||||+++|++|+.+ |||||++++|||++||||++||+++|++||||++|+|++|+|+.|. .+.
T Consensus 2 ~vG~~~~r~d~~~kvtG~~~Y~~D~~~-~gmL~a~~~rSp~aharI~siD~~~A~~~pGV~~Vvt~~D~p~~~~~~~~~~ 80 (759)
T PRK09970 2 AIGKSIMRVDAIAKVTGRAKYTDDYVM-AGMLYAKYVRSPIAHGKVKSIDTEEARSLPGVEAVFTWEDVPDIPFPTAGHP 80 (759)
T ss_pred CCCCCCcCcchHHhCcCCccccccCCC-CCCEEEEEEcCCCceEEEeeeeHHHHHhCCCcEEEEeHHHcCCccccccccc
Confidence 489999999999999999999999998 8999999999999999999999999999999999999999986442 111
Q ss_pred -------CCccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccC--CCCC-----Ccc
Q 000657 683 -------VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHPN-----TER 748 (1370)
Q Consensus 683 -------~~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a--~~~~-----~~~ 748 (1370)
...|+++|++++|||+|||||+|+|+|+++|++|+++|+|+||+||+++|+++|+++++ +|+. ...
T Consensus 81 ~~~~~~~~~~~~~~la~~~Vr~~G~~VAaVvA~~~~~A~~A~~~i~Veye~lp~v~~~~~Al~~~a~~ih~~~~ni~~~~ 160 (759)
T PRK09970 81 WSLDPNHRDIADRALLTRHVRHHGDAVAAVVARDELTAEKALKLIKVEYEELPVITDPEAALAEGAPPIHNGRGNLLKQS 160 (759)
T ss_pred cCCCCCCCCCCCccCcCCEEEEcCCeEEEEEeCCHHHHHHHhCCCcEeEEeCCccCCHHHHhCCCCCccCCCCCceeeee
Confidence 12378999999999999999999999999999999999999999999999999998776 3431 123
Q ss_pred ccccCCcccccccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEE
Q 000657 749 CFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCK 828 (1370)
Q Consensus 749 ~~~~Gdv~~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~ 828 (1370)
.+.+||++++| ++|++|||++|++++|+|++|||++|+|+|+ ++|+|+||+|||+|+.+|..+|++||||++||||+
T Consensus 161 ~~~~Gd~~~a~--~~a~~vve~~y~~~~~~h~~mEp~~~iA~~~-~~g~l~v~~stQ~p~~~~~~ia~~Lglp~~~VrV~ 237 (759)
T PRK09970 161 TMSTGNVQQTI--KAADYQVQGHYETPIVQHCHMENVTSYAYME-DDGRITIVSSTQIPHIVRRVVGQALGIPWGKVRVI 237 (759)
T ss_pred eeccCChhHhh--ccCCEEEEEEEEECCEeEeccCCceEEEEEC-CCCCEEEEECCCcHHHHHHHHHHHhCCCHHHEEEE
Confidence 46789999999 9999999999999999999999999999997 46889999999999999999999999999999999
Q ss_pred ecccCCCCCCCCccchHHHHHHHHHHHcC-CCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCC
Q 000657 829 TKRIGGGFGGKETRSAFIAAAAAVPSFLL-NRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGN 907 (1370)
Q Consensus 829 ~~~vGGgFGgK~~~~~~~~~~aAlaA~~~-gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga 907 (1370)
++++|||||+|.+.. ....||++|+++ ||||||+|||+|+|..+.+||++.+++|+|+|+||+|+|++++++.|+|+
T Consensus 238 ~~~vGGgFG~K~~~~--~~~~aa~la~~~~grPVk~~~~R~E~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~Ga 315 (759)
T PRK09970 238 KPYVGGGFGNKQDVL--EEPLAAFLTSKVGGRPVKVSLSREECFLATRTRHAFTIDIKMGVNRDGTLKGYSLDVLSNTGA 315 (759)
T ss_pred eCCCCCCcCcccccC--HHHHHHHHHHHhcCCCeEEeechhHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEeecccc
Confidence 999999999998753 245678888888 99999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCC
Q 000657 908 SLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGE 987 (1370)
Q Consensus 908 ~~~~~~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~ 987 (1370)
|.+++..++..+...+.++|+|||++++++.|+||++|+|+|||||.+|++|++|++||++|++|||||+|||++|++++
T Consensus 316 y~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mD~~A~~lg~DP~e~R~~N~~~~ 395 (759)
T PRK09970 316 YASHGHSIASAGGNKVAYLYPRCAYKYSSKTVYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEFRLRNAARE 395 (759)
T ss_pred CCCcchHHHHHHHhhcCCCccCceEEEEEEEEECCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCC
Confidence 99888778777777889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccc-CccccCCCHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEEEEEecCCc
Q 000657 988 GSILHY-GQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGT 1066 (1370)
Q Consensus 988 g~~~~~-g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGs 1066 (1370)
|+.+++ |+.+++..+++||++++++++|+++++..+. .+.|++||+++++..++.++.....+.+++.|+|++||+
T Consensus 396 g~~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~rGiG~a~~~~~~~~~~~~~~~~~a~v~i~~dGs 472 (759)
T PRK09970 396 GDANPLSGKRIYSAGLPECLEKGRKIFEWDKRRAECKN---QQGNLRRGVGVACFSYTSGTWPVGLEIAGARLLMNQDGT 472 (759)
T ss_pred CCcCCCCCeeecCCCHHHHHHHHHHhcCchhhhHhHhh---hcCCceEEEEEEEEEEeecCCCCCCCcceEEEEEccCce
Confidence 999885 8889999999999999999999987654331 123466777777766766553333457899999999999
Q ss_pred EEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecC-CCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q 000657 1067 VLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSET-STDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK 1145 (1370)
Q Consensus 1067 V~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~-dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~ 1145 (1370)
|+|.+|.+|||||+.|+++||+||+||+|+++|+|..+ ||+.+|++++|+|||++++.|.|+++||++||+||++.+++
T Consensus 473 v~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~~V~v~~~~dT~~~p~~~gt~aSr~t~~~g~Av~~Aa~~lr~~l~~~aa~ 552 (759)
T PRK09970 473 VQVQSGATEIGQGSDTVFSQMVAETVGIPVSDVRVISTQDTDVTPFDPGAYASRQSYVAGPAIRKAALELKEKILAHAAV 552 (759)
T ss_pred EEEEECCCCcCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988 99999999999999999999999999999999999988765
Q ss_pred C-------------------C---CCCHHHHHHHhhcc---cccceEEEEeecCCccccccCCCCCCcccccEEEEEEEE
Q 000657 1146 H-------------------N---FNSFAELASACYVQ---RIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEV 1200 (1370)
Q Consensus 1146 ~-------------------~---~~~~~~~~~~a~~~---~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeV 1200 (1370)
+ + ..+|.+++..++.. ..++...+.|..+. .+|+|+|+++||
T Consensus 553 ~l~~~~~~l~~~~G~v~~~~~~~~~~~~~~la~~a~~~~~~~~~~~~~~~~~~~~-------------~~~~~~a~~aeV 619 (759)
T PRK09970 553 MLHQSAMNLDIIDGHIVVKRPGEPLMSLEELAMDAYYHPERGGQITAESSIKTTT-------------NPPAFGCTFVDV 619 (759)
T ss_pred HhCCChHHEEEECCEEEECCCCCccccHHHHHHHhhccccCCCceeEEEEecCCC-------------CCCceEEEEEEE
Confidence 3 0 26799998877653 23466666654321 257899999999
Q ss_pred EeeCCCCcEEEEEEEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCC
Q 000657 1201 EIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDV 1280 (1370)
Q Consensus 1201 eVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~Di 1280 (1370)
|||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||++ +|+++++||++|++|++.|+
T Consensus 620 eVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~qGiG~aL~E~~~~d~~------~G~~~~~~~~dY~ip~~~d~ 693 (759)
T PRK09970 620 EVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDEK------TGVVRNPNLLDYKLPTMMDL 693 (759)
T ss_pred EEeCCCCeEEEEEEEEEEEcCcccCHHHHHHHHHhHHHHHHHHHhcceeEEcCC------CCeECCCChhhccCCCcccC
Confidence 999999999999999999999999999999999999999999999999999972 39999999999999999999
Q ss_pred CCeeEEEEeecCCCCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhcc
Q 000657 1281 PLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1353 (1370)
Q Consensus 1281 P~~~~v~~~~~~~~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~~ 1353 (1370)
|+ |+++++++ ++|.+|||+||+||++++ ++++||+|||++|+ |+| ++++|+|||+||+++.+
T Consensus 694 P~-i~v~~ve~-~~~~~p~GaKgvGE~~~~---~~~~AIanAi~~A~---G~r---~~~lP~tpe~v~~al~~ 755 (759)
T PRK09970 694 PQ-LESAFVEI-YEPQSAYGHKSLGEPPII---SPAPAIRNAVLMAT---GVA---INTLPMTPQRLFEEFKE 755 (759)
T ss_pred CC-eEEEEEec-CCCCCCCCCcccCCCccc---chHHHHHHHHHHhh---CCC---cCCCCCCHHHHHHHHHh
Confidence 95 99999997 899999999999999996 47899999999998 987 69999999999999865
|
|
| >TIGR03196 pucD xanthine dehydrogenase D subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-145 Score=1390.09 Aligned_cols=712 Identities=28% Similarity=0.372 Sum_probs=628.1
Q ss_pred ccCCccc-ccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCCCCCCC
Q 000657 606 SVGSPEV-HLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVV 684 (1370)
Q Consensus 606 ~iG~~~~-r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~g~~~ 684 (1370)
.|||+++ |+|++.||||+++|++|+.+ |||||++++|||++||+|++||+++|+++|||++|+|++|+|+.+.+|...
T Consensus 2 ~iG~~~~~R~d~~~kvtG~a~Y~~Di~~-pgmL~a~~vrSp~aha~I~siD~s~A~a~pGV~~V~t~~D~p~~~~~g~~~ 80 (768)
T TIGR03196 2 GIGKPSRVRPDGPDKVTGEFKYMGDLRF-PGMLHAKTLRSAHAHAEIRRVCTDAAEKLEGVQAMVTAADVPGLARFGIII 80 (768)
T ss_pred cCCCcCCcCcchHhhCcccccccccCCC-CCcEEEEEEecCCCcEEEeeccHHHHHhCCCcEEEEehHHCCCCCCCCccC
Confidence 4899999 99999999999999999998 799999999999999999999999999999999999999999766566666
Q ss_pred ccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccC--CCC--C--CccccccCCcccc
Q 000657 685 ADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHP--N--TERCFRKGDVDIC 758 (1370)
Q Consensus 685 ~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a--~~~--~--~~~~~~~Gdv~~a 758 (1370)
.|+|+|++++|||+|||||+|||+|+++|++|+++|+|+||+||+++|+++|+++++ +|+ | ......+||++++
T Consensus 81 ~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~Veye~lp~v~d~~~a~~~~a~~i~~~~ni~~~~~~~~Gd~~~a 160 (768)
T TIGR03196 81 ADQPVFAADEIRYAGDAIAAVAAEDEEIAEAALAAIEVDYEELAPMDDPDKALQPDAEPLHEAGNILHEAEFRHGDPDEG 160 (768)
T ss_pred CCcccccCCEEEEcCCeEEEEEECCHHHHHHHhccCceEEEeCCCcCCHHHHhcCCCCeECCCCcCcceeeeccCCHhHH
Confidence 789999999999999999999999999999999999999999999999999998764 342 1 1234578999999
Q ss_pred cccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCC
Q 000657 759 FQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGG 838 (1370)
Q Consensus 759 f~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGg 838 (1370)
| ++|+++||++|++++|+|++|||++|+|+|+ ++|+|+||+|||+|+.+|..||++||||++||||+++++|||||+
T Consensus 161 f--~~a~~vve~~y~~~~~~h~~mEp~~~~A~~~-~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~ 237 (768)
T TIGR03196 161 F--AAGDTVFEDQYELGMQDHAFLAPEAALAMPA-ADGGFDLRAATQHGHKDREQIAACFDIPEEKIRITLAGMGGAFGG 237 (768)
T ss_pred h--ccCCEEEEEEEEeCCeeeeecCCceEEEEEc-CCCCEEEEECCCchHHHHHHHHHHhCCCHHHEEEEeCCCCCccCC
Confidence 9 9999999999999999999999999999997 467899999999999999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHH
Q 000657 839 KETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLER 918 (1370)
Q Consensus 839 K~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~ 918 (1370)
|.... .++.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|++++++++.|+|+|.+++..+...
T Consensus 238 K~~~~--~~~~aa~~A~~~gRPVk~~~sReE~~~~~~~r~~~~~~~k~g~~~dG~i~a~~~~~~~d~Gay~~~~~~v~~~ 315 (768)
T TIGR03196 238 KDDLN--IQIHAALLALASGLPVKIAQDRKESFLGGIHRHPAKITFKHGADADGNLLAHDAKIVADGGAYASLGPAVLAF 315 (768)
T ss_pred ccccc--HHHHHHHHHHHhCCCEEEEechHHhhhcCCCCCCeEEEEEEEECCCCcEEEEEEEEEecccccCCccHHHHHH
Confidence 98753 4577899999999999999999999999999999999999999999999999999999999999888777777
Q ss_pred HhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCccccCcccc
Q 000657 919 AMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQ 998 (1370)
Q Consensus 919 ~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~~~g~~~~ 998 (1370)
+...+.++|++||++++++.|+||++|+|+|||||.+|+.||+|++||++|++|||||+|||++|++++|+.+++|+++.
T Consensus 316 ~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~ 395 (768)
T TIGR03196 316 AVEHAAGPYRIPNAHLEGISVFTNNGPAGAFRGFGGNQITFAHEAHLDRLADALGIDPLDLRRKNARKPGDLGPLEHRIA 395 (768)
T ss_pred HHHhcCCCcccceEEEEEEEEEcCCCCCCccCCCChhHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcCCCCcccC
Confidence 77778999999999999999999999999999999999999999999999999999999999999999999889998886
Q ss_pred -CCCHHHHHHHHHHhcCCh-----hhhHhhhhcc-------cCCCcceeeeEEEeeeeccccccccCC--ceeEEEEEec
Q 000657 999 -HCTLFPLWNELKLSCDFL-----NARKEVDNFN-------LNNRWKKRGIAMVPTKFGISFTLKLMN--QAGALVHVYT 1063 (1370)
Q Consensus 999 -~~~l~~~l~~~~~~~~~~-----~r~~~~~~~~-------~~~~~~grGia~~~~~~g~~~~~~~~~--~~~a~V~l~~ 1063 (1370)
+..+++||++++++++|. ++......|+ .+++ ++||++++...++.++.....+ ++++.|+|++
T Consensus 396 ~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~rGiG~a~~~~~~~~~~~~~~~~~~~a~v~l~~ 474 (768)
T TIGR03196 396 APDGAAEVIEAIASRPLPKAPILKKANRAVTALPGGRPAAAECGR-LQRGTGAAIAMHGGGFGEGMDDAAVAGARLELAE 474 (768)
T ss_pred CcCCHHHHHHHHHhhccccchhhhhhhhhhhhhhhhhhhhhhcCC-eeEEEEEEEEEecccCCCCccccCCccEEEEEeC
Confidence 788999999999999998 3322211221 1233 3456666666555544321112 2478999999
Q ss_pred CCc--EEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHH
Q 000657 1064 DGT--VLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEP 1141 (1370)
Q Consensus 1064 DGs--V~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~ 1141 (1370)
||+ |+|.+|++|||||++|+++|||||+||||+|+|+|..+||+.+|++++|+|||+|++.|+||++||++||+||++
T Consensus 475 dGsv~v~v~~g~~d~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~kl~~ 554 (768)
T TIGR03196 475 DGTVKIRAHFACAECGQGFLAAAEQIAMEELGCAAEDISIAIADTAKGPKAGSSSASRGTSMSGGAIQGACAAFAAQLKA 554 (768)
T ss_pred CCCeEEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCchhhhhHhHHHHHHHHHHHHHHHHHH
Confidence 996 889999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HhhhCCC------------------------------CCHHHHHHHhhcccccceEEEEe-ecCCccccccCCCCCCccc
Q 000657 1142 IASKHNF------------------------------NSFAELASACYVQRIDLSAHGFY-ITPEIDFDWITGKGNPFRY 1190 (1370)
Q Consensus 1142 ~a~~~~~------------------------------~~~~~~~~~a~~~~~~l~~~g~~-~~~~~~~~~~~~~~~~~~~ 1190 (1370)
+++++-. .+|.+++. ...+.+.+.| ..|...++...+.+.++.+
T Consensus 555 ~aa~~l~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (768)
T TIGR03196 555 RAAETAGLPAEVVEAPAENLIPGAAEIVGDKNEAALRVPLAEAAA-----DGPIAAETAFHDFPTSALDADVGQGDGHFA 629 (768)
T ss_pred HHHHHhCCChhhEEEeCCeeeecccceeeecCCCcceEEHHHHhc-----cccceeeeccccCCCcccccccccCCCccc
Confidence 8654200 23444431 1123343433 2222222333333444567
Q ss_pred ccEEEEEEEEEeeCCCCcEEEEEEEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCC
Q 000657 1191 FTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPG 1270 (1370)
Q Consensus 1191 ~~~ga~~aeVeVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~ 1270 (1370)
|+||||++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.|| +|+++|.||+
T Consensus 630 ~~~ga~~~eveVd~~tG~v~v~~~~~~~D~G~~iNp~~~~gQi~Gg~~~Gig~al~E~~~~~--------~G~~~~~~~~ 701 (768)
T TIGR03196 630 FAAAAAAAEVDVDLDLGDVKLIDCAHAIAAGPVLNPLALRGQIEGGAAMALGLALMEEAKMT--------DGRVAAENFD 701 (768)
T ss_pred ccceEEEEEEEEECCCCcEEEEEEEEEEECCCccCHHHHHHHHHHHHHHHHHHHHhCCeEec--------CCeECCCCcc
Confidence 89999999999999999999999999999999999999999999999999999999999995 5999999999
Q ss_pred CCCCCCCCCCCCeeEEEEeecCCCCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q 000657 1271 SYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1348 (1370)
Q Consensus 1271 ~Y~iP~~~DiP~~~~v~~~~~~~~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~ 1348 (1370)
+|++|++.|+|+ +++.++++ +++.+|||+||+||+++++ +++||+|||++|+ |+| ++++|+|||+|+
T Consensus 702 ~Y~~p~~~d~P~-~~~~~~~~-~~~~~p~G~kG~GE~~~~~---~~~AianAi~~A~---G~r---~~~lP~tpe~v~ 768 (768)
T TIGR03196 702 DYLIPGIADVPD-LDFIAIED-LMKDAPYGPKGVGEAGTCA---ATPAIIAAIHDAV---GCD---INKLPIRPEDLL 768 (768)
T ss_pred cccCCChhhCCC-eEEEEEeC-CCCCCCCCCccCcCccccc---hHHHHHHHHHHHh---CcC---cccCCCChhhCC
Confidence 999999999996 89999987 8999999999999999975 6789999999998 987 689999999984
|
This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin. |
| >TIGR02416 CO_dehy_Mo_lg carbon-monoxide dehydrogenase, large subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-145 Score=1389.52 Aligned_cols=703 Identities=25% Similarity=0.320 Sum_probs=615.8
Q ss_pred CccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCC--CCCCC-ccccccc
Q 000657 615 SSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR--IGPVV-ADEELFA 691 (1370)
Q Consensus 615 d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~--~g~~~-~d~~~la 691 (1370)
|+.++|||+++|++|+.+ |||||++++|||++||+|++||+|+|++||||++|+|++|+|+.+. .+... .++|+|+
T Consensus 1 e~~r~vtG~a~Y~~Di~~-pgmL~a~~vrSp~aha~I~~ID~s~A~~~pGV~~V~t~~D~p~~~~~~~~~~~~~~~~~la 79 (770)
T TIGR02416 1 EDIRFIQGKGNYVDDVKL-PGMLHGDIVRSPHAHARIKSIDTSAAKALPGVFAVLTAADLKPLNLHWMPTLAGDVQAVLA 79 (770)
T ss_pred CCcccccccccccccCCC-CCCEEEEEEcCCCccEEEecccHHHHhhCCCcEEEEEHHHcCCccCCcCCCCCCCCcccCc
Confidence 567899999999999998 8999999999999999999999999999999999999999975442 12111 2378999
Q ss_pred cCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccC--CCCCC----------------cccc---
Q 000657 692 SEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHPNT----------------ERCF--- 750 (1370)
Q Consensus 692 ~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a--~~~~~----------------~~~~--- 750 (1370)
+++|||+|||||+|||+|+++|++|+++|+|+||+||+++|++||+++++ +|+.. ....
T Consensus 80 ~~~Vry~Ge~Va~VvA~t~~~A~~A~~~v~V~ye~lp~v~d~~~A~~~~a~~ih~~~~~~~~~~~~~~n~~~~~~~~~~g 159 (770)
T TIGR02416 80 DEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVVIDPFKALEPDAPVLREDLKGKTTGAHGARKHHNHIFRWEIG 159 (770)
T ss_pred CCEEEEcCCcEEEEEECCHHHHHHHhccceeeeecCCccCCHHHHhcCCCceecCCCCCccccccccccccceeeEEecC
Confidence 99999999999999999999999999999999999999999999998765 34310 0112
Q ss_pred ccCCcccccccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEec
Q 000657 751 RKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTK 830 (1370)
Q Consensus 751 ~~Gdv~~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~ 830 (1370)
..||++++| ++|++|||++|++++|+|++|||++|+|+|++++|+|+||+|||+|+.+|..||++||||++||||+++
T Consensus 160 d~gd~~~af--~~a~~vve~~~~~~~~~h~~mEp~~~iA~~~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~ 237 (770)
T TIGR02416 160 DKAATDAVF--AKAEVVVKQMMTYPRVHPSPLETCGCVASMDPIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIRVISP 237 (770)
T ss_pred CccchhHHh--ccCCEEEEEEEEeCceeeEcCCCCeEEEEEeCCCCeEEEEECCCcHHHHHHHHHHHhCCCHHHEEEEcC
Confidence 345679999 999999999999999999999999999999843588999999999999999999999999999999999
Q ss_pred ccCCCCCCCCccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCC
Q 000657 831 RIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLD 910 (1370)
Q Consensus 831 ~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~ 910 (1370)
++|||||+|..... ..+.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|++++++++.|+|+|.+
T Consensus 238 ~vGGgFG~K~~~~~-~~~~aa~~A~~~gRPVk~~~sR~E~~~~~~~r~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~~ 316 (770)
T TIGR02416 238 DIGGGFGNKVGIYP-GYVCAIVASIVLGVPVKWVEDRMENLSTTSFARDYHMTGELAATKDGKILAMRCNVLADHGAFDA 316 (770)
T ss_pred CCCCCccccccccc-HHHHHHHHHHHhCCCEEEecchHHhhhcCCCCCceEEEEEEEECCCCcEEEEEEEEEeeccccCC
Confidence 99999999987533 33458899999999999999999999999999999999999999999999999999999999987
Q ss_pred chHHHHHHHhh--ccCCCcccCeEEEEEEEEeCCCCCCC-ccC-CCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCC
Q 000657 911 LSLAVLERAMF--HSDNVYEIPNVRIMGNVCFTNFPSNT-AFR-GFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQG 986 (1370)
Q Consensus 911 ~~~~v~~~~~~--~~~~~Y~ipn~r~~~~~v~TN~~p~g-a~R-g~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~ 986 (1370)
++..++..... .+.++|+|||++++++.|+||++|.+ +|| |||.+|+.|++|++||++|++|||||+|||++|+++
T Consensus 317 ~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~gta~Rgg~G~pq~~fa~E~~mD~~A~~lg~DP~e~R~~N~~~ 396 (770)
T TIGR02416 317 CADPSKWPAGFFNICTGSYDIPVAHCAVDGVYTNKAPGGVAYRCSFRVTEAVYAIERAVDTLAQRLEMDSADLRIKNFIQ 396 (770)
T ss_pred CccchhhhhhhhhhcCCccccceEEEEEEEEECCCCCCCCccccCCccHHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCC
Confidence 65544433222 46899999999999999999999998 999 899999999999999999999999999999999998
Q ss_pred CCC---ccccCccccCCCHHHHHHHHHHhcCChhhhHhhhhcccCCC---cceeeeEEEeeeeccccccc-----cCCce
Q 000657 987 EGS---ILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNR---WKKRGIAMVPTKFGISFTLK-----LMNQA 1055 (1370)
Q Consensus 987 ~g~---~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~---~~grGia~~~~~~g~~~~~~-----~~~~~ 1055 (1370)
+++ .+++|+.+++..+++||+++++.++|++++...+.++..++ ++|+|+++.....+.+.... ....+
T Consensus 397 ~~~~p~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~G~a~~~~~~~~~~~~~~~~~~~~~~~ 476 (770)
T TIGR02416 397 PEQFPYTAPLGWEYDSGDYPLAMKKAMDTVDYHQLRAEQAAKRKRGETRELMGIGISFFTEIVGAGPSKNCDILGVGMFD 476 (770)
T ss_pred CccCccccCCCceecCCCHHHHHHHHHHhcCchhhHHHHHHHHhcCCCCceEEEEEEEEEEeccCCCcccccccccCccc
Confidence 865 34558899999999999999999999987655444444344 34555554322222221000 01146
Q ss_pred eEEEEEecCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHH
Q 000657 1056 GALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQI 1135 (1370)
Q Consensus 1056 ~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L 1135 (1370)
++.|+|++||+|+|.+|++|||||++|+++|||||+||||+|+|+|..+||+.+|++++|+|||+|.++|.||++||++|
T Consensus 477 ~a~v~l~~dG~v~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l 556 (770)
T TIGR02416 477 SCEIRIHPTGSAIARMGTKSQGQGHETTYAQIIATELGIPAEDIMVEEGDTDTAPYGLGTYGSRSTPVAGAATALAARKI 556 (770)
T ss_pred eEEEEECCCceEEEEECCCCCCCCchHHHHHHHHHHHCCCHHHEEEEecCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhC----------------------CCCCHHHHHHHhhccc-----ccceEEEEeecCCccccccCCCCCCc
Q 000657 1136 KARMEPIASKH----------------------NFNSFAELASACYVQR-----IDLSAHGFYITPEIDFDWITGKGNPF 1188 (1370)
Q Consensus 1136 ~~rl~~~a~~~----------------------~~~~~~~~~~~a~~~~-----~~l~~~g~~~~~~~~~~~~~~~~~~~ 1188 (1370)
|+||+++++.+ ...+|.+++..+|... .+|.+.++|..+.
T Consensus 557 ~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~------------- 623 (770)
T TIGR02416 557 KAKAQMIAAHMLEVHEGDLEWDVDRFRVKGDPSKFKTMADIAWAAYNSPPPGLEPGLEAVNYYDPPN------------- 623 (770)
T ss_pred HHHHHHHHHHHhCCCHHHEEEECCEEEECCCCCCcccHHHHHHHHhccCccCcCCceEEEEEeCCCC-------------
Confidence 99999987643 0158999998876431 2377777764321
Q ss_pred ccccEEEEEEEEEeeCCCCcEEEEEEEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCC
Q 000657 1189 RYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCG 1268 (1370)
Q Consensus 1189 ~~~~~ga~~aeVeVD~~TG~v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~ 1268 (1370)
.+|+||+|++|||||++||+++|+|+++++|||++|||++++|||+||++||||++|+|++.||+ +|+++|++
T Consensus 624 ~~~~~ga~~~eVeVD~~TG~v~v~~~~~~~D~G~~iNP~~~~GQi~Gg~~qGiG~aL~E~~~~d~-------~G~~l~~~ 696 (770)
T TIGR02416 624 MTYPFGAYFCVVDIDVDTGVAKVRRFYALDDCGTRINPMIIEGQIHGGLTEGFAVAMGQEIRFDE-------QGNVLGAS 696 (770)
T ss_pred CCCCceeEEEEEEEECCCCeEEEEEEEEEEECCCccCHHHHHHHHHhhHHHHHHHHHhCcceECC-------CCCCCCCC
Confidence 25789999999999999999999999999999999999999999999999999999999999998 89999999
Q ss_pred CCCCCCCCCCCCCCeeEEEEeecCCCCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHH
Q 000657 1269 PGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1348 (1370)
Q Consensus 1269 ~~~Y~iP~~~DiP~~~~v~~~~~~~~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~ 1348 (1370)
|++|++|++.|+|+ +++.++++ +++.+|||+||+||+++++ +++||+|||++|++++|++ ++++|+|||+||
T Consensus 697 ~~dY~iPta~DvP~-~~~~~~e~-~~~~~p~GaKGvGE~~~~~---~~aAianAI~dA~~~~Gv~---~~~lP~Tpe~v~ 768 (770)
T TIGR02416 697 LMDYFLPTAVETPH-WETDHTVT-PSPHHPIGAKGVGESPHVG---SVPCFSNAVVDAYAFLGVG---HIDMPHTAWRVW 768 (770)
T ss_pred hhhCcCCchhcCCC-eEEEEeec-CCCCCCCCccccCCccccc---HHHHHHHHHHHHHhhcCCC---cccCCCCHHHHh
Confidence 99999999999996 89999987 8999999999999999986 5689999999998778997 689999999998
Q ss_pred H
Q 000657 1349 M 1349 (1370)
Q Consensus 1349 ~ 1349 (1370)
+
T Consensus 769 ~ 769 (770)
T TIGR02416 769 K 769 (770)
T ss_pred h
Confidence 5
|
This model represents the large subunits of group of carbon-monoxide dehydrogenases that include molybdenum as part of the enzymatic cofactor. There are various forms of carbon-monoxide dehydrogenase; Salicibacter pomeroyi DSS-3, for example, has two forms. Note that, at least in some species, the active site Cys is modified with a selenium attached to (rather than replacing) the sulfur atom. This is termed selanylcysteine, and created post-translationally, in contrast to selenocysteine incorporation during translation as for many other selenoproteins. |
| >COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-116 Score=1113.14 Aligned_cols=699 Identities=29% Similarity=0.382 Sum_probs=615.0
Q ss_pred CccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCC-CCCCCCC
Q 000657 605 TSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQG-DNRIGPV 683 (1370)
Q Consensus 605 ~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg-~n~~g~~ 683 (1370)
..+|+++.|.|+..||||+++|++|+.. +||+|+++||||++|++|++||.++|+++|||++|+|++|++. .+.....
T Consensus 4 ~~~gr~~~R~~~~~~vtG~~~y~~d~~~-~~~~~~~~vrs~~a~a~i~~id~~ea~~~~gv~av~ta~~l~~~~~~~~~~ 82 (731)
T COG1529 4 EIIGRSVLRADGLGKVTGKGRYADDIVA-PGMLYAAFVRSPYAHARIVSIDVSEAQGLPGVLAVITAEELPAWSPVRVEL 82 (731)
T ss_pred ccCCCCcccccchhheeeeeheehhhcC-CCCceEEEEeccCCceEEEEechHHHhhCCCeEEEechhhCcccccccccc
Confidence 4799999999999999999999999998 7999999999999999999999999999999999999999985 2221112
Q ss_pred CccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCcCCCHHHHHhccC--CCCC--CccccccCCccccc
Q 000657 684 VADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHPN--TERCFRKGDVDICF 759 (1370)
Q Consensus 684 ~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a--~~~~--~~~~~~~Gdv~~af 759 (1370)
.+..++|+.++|+|+||+||+|+|+|+++|++|+++|+|+||++|++.++++|+++++ +|+. .......||.+ +|
T Consensus 83 ~p~~~~l~~~~v~~~G~~vA~vva~d~~~A~~aa~~v~V~ye~l~~~v~~~~a~~~~~~~ih~~~n~~~~~~~g~~~-a~ 161 (731)
T COG1529 83 APADEVLARGKVRYTGEPVAAVVAEDEYQARAAAELVLVEYEALPPVVDPEEALAEDAPVIHDELNIARDATFGDDD-AF 161 (731)
T ss_pred CCcchhhccCceEEeCCeEEEEEeCCHHHHHHHHhhceeeeccCCCcCCHHHHhcCCCcccccccccccccccccch-hh
Confidence 2222378999999999999999999999999999999999999999999999999875 3441 24556778888 99
Q ss_pred ccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEecccCCCCCCC
Q 000657 760 QSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGK 839 (1370)
Q Consensus 760 ~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFGgK 839 (1370)
++|+++++.+|.++++.|.+|||++++++|+ ++++|++|++||+|+.++.+++++|++|+++|||+++++|||||+|
T Consensus 162 --a~A~~~v~~~~~~~~~~~~~~E~~g~~a~~~-d~~~lt~~~~tQ~~~~~~~~l~~~l~~p~~~vrvi~~dvGggfG~K 238 (731)
T COG1529 162 --AAAAVVVEAPYKTPRKDPNPMEPHGVVAVPD-DGDKLTVWASTQIPHRLRGMLAAVLGIPPSKVRVISPDVGGGFGSK 238 (731)
T ss_pred --hcCcEEeeeeeeccCcCccCcccccceeeEc-CCCeEEEEEccCCchHHHHHHHHHhCCCHHHeEEecCCCCcccCCc
Confidence 9999999999999999999999999999998 4569999999999999999999999999999999999999999999
Q ss_pred CccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCCCCCCchHHHHHHH
Q 000657 840 ETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERA 919 (1370)
Q Consensus 840 ~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~ 919 (1370)
... +.....++++|+++||||||+++|+|.|+.+.+||+...++++++++||+|++++++++.|.|+|. +..+....
T Consensus 239 ~~~-~~~~~~~~~aa~~~grpVk~~~tR~e~~~~~~~~~~~~~~~~~~a~~dg~l~~~~~~~~~~~Gay~--~~~~~~~~ 315 (731)
T COG1529 239 GVV-YVEEILAALAAVVAGRPVKWIETREELFVATGHRRATLIDVKLGADKDGRLLAIKGTVAADTGAYN--GPTVPAAA 315 (731)
T ss_pred ccc-eeHHHHHHHHHHhcCCCeEEecchHHhhhccCCCCCceEEeeeecCcCCcEEeeeeeEEecCCCcc--ccchhHHH
Confidence 875 456667779999999999999999999999999999999999999999999999999999999996 44455666
Q ss_pred hhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCccccCccccC
Q 000657 920 MFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQH 999 (1370)
Q Consensus 920 ~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~~g~~~~~g~~~~~ 999 (1370)
...+.++|.|+|+++..+.++||++|+++|||+|.++++|++|++||+||++|||||+|+|++|+++.|... ++..+++
T Consensus 316 ~~~~~g~Y~i~~~~~~~~~v~tn~~p~~~~Rg~g~~~~~~a~E~~~d~lA~~Lgidp~eiR~~n~~~~g~~~-~~~~~~~ 394 (731)
T COG1529 316 AGLARGPYKIEAVYIEPYLVHTNMPPNGAYRGAGRPEGTFALERAVDELAEELGIDPVEIRLRNLIRGGPFG-LGRRYDS 394 (731)
T ss_pred HHhcCCceecccceeeeEEEEcCCCCCcccccCCCchhHHHHHHHHHHHHHHhCCCHHHHhhhhccccCCCC-CcccccC
Confidence 778899999999999999999999999999999999999999999999999999999999999999988776 7778889
Q ss_pred CCHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEEEEEecCCcEEEEEcCccCCcc
Q 000657 1000 CTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQG 1079 (1370)
Q Consensus 1000 ~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DGsV~V~~g~~e~GqG 1079 (1370)
.++.+|+++++++++|.++..+..+.+..+.++|+|+++. .+.+.... .+.+.|+++.||+++|.+|.+++|||
T Consensus 395 ~~~~~~~~~~ak~~~~~~~~~k~~~~re~~~~~G~g~a~~--~~~~~~~~----~~~a~v~~~~~g~v~v~~g~~~~G~G 468 (731)
T COG1529 395 GDYLEELDEAAKRFGWSERPVKPIWTREGDLRRGVGRAMY--TEPSGAGP----GEGARVRLEADGTVTVRTGATDIGQG 468 (731)
T ss_pred ccHHHHHHHHHHhcCcccccCChhhhhcCCeeeeeEEEEE--EEeccCCC----CCcEEEEEcCCCcEEEEECCccCCCc
Confidence 9999999999999999876555544444444445555554 33333211 15699999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhCCC-----------
Q 000657 1080 LHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNF----------- 1148 (1370)
Q Consensus 1080 ~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~~~~----------- 1148 (1370)
++|.++|++|+.||||.++|++..+||+..+.+++|+|||++.+.+.|+.+||++|++|+...++.+..
T Consensus 469 ~~t~~~q~~ae~lgip~~~V~v~~gDt~~~~~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~aa~~l~~~~~~~~~~~g 548 (731)
T COG1529 469 TDTVLAQIAAEELGIPPDDVEVVHGDTDVPVGGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVAAARMLGADAEDVVLEDG 548 (731)
T ss_pred HHHHHHHHHHHHhCCCHHHEEEEecCCCCCCCCCCCcCcccccchHHHHHHHHHHHHHHHHHHHHhhhCCChhHeeeccC
Confidence 999999999999999999999999999999999999999999999999999999999988776654311
Q ss_pred ------------CCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCcEEEEEEEE
Q 000657 1149 ------------NSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANV 1216 (1370)
Q Consensus 1149 ------------~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~ 1216 (1370)
.+|++.+.... ...+...++|. . ..+|+|+||++|||||++||++||+|+++
T Consensus 549 ~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~~~~~~-----------~---~~~~~~~A~~~EV~Vd~~tG~vrV~r~~~ 612 (731)
T COG1529 549 AFKVGGGDRRSAVSLKEVAGKGL--APGLAVAASFG-----------S---DNTYPYGAHIAEVEVDPETGEVRVLRVVA 612 (731)
T ss_pred eeeeccCCccceeeHHHhhhccc--cCccccccccc-----------c---cccccceeEEEEEEEECCCCcEEEEEEEE
Confidence 12333333220 01111111111 0 11688999999999999999999999999
Q ss_pred EEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEEeecCCCCC
Q 000657 1217 ILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVK 1296 (1370)
Q Consensus 1217 ~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~~~~~~~~~ 1296 (1370)
++|||++|||++++|||+||++||||++|+|+.+||+ +|+++|.||.+|.||++.|+|+ ++|+++++ |++.
T Consensus 613 ~~D~G~vvNP~~~~~Qv~GGi~~Gig~aL~E~~i~d~-------~g~~~~~n~~dY~ip~~~d~P~-iev~~v~~-p~~~ 683 (731)
T COG1529 613 VDDCGRVVNPKLAEGQVEGGILMGIGMALYEEAIYDE-------DGQLLNSNLADYGIPRAADAPE-VEVEFVES-PSPF 683 (731)
T ss_pred EEecCCccCHHHHHHHHHhHHHHHHHHHhhccceECC-------CCCcCCCCcccccCCCcccCCc-eEEEEecC-CCCC
Confidence 9999999999999999999999999999999999998 8999999999999999999997 99999998 7778
Q ss_pred CCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhc
Q 000657 1297 AIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACL 1352 (1370)
Q Consensus 1297 ~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~~~~~~~lP~tpe~I~~a~~ 1352 (1370)
+|+|+||+||+++++ +++||+|||++|+ |.| ++++|+|||+||.++.
T Consensus 684 ~p~g~kGvGE~g~~~---~~pAvaNAV~~At---Gkr---i~~lP~tp~~i~~al~ 730 (731)
T COG1529 684 GPLGAKGVGEGGIIG---IAPAIANAVFDAT---GKR---IRDLPITPERILAALR 730 (731)
T ss_pred CCCCCCCcCcCccCc---hhHHHHHHHHHHh---CCc---cccCCCCHHHHHHhhh
Confidence 899999999999975 6799999999998 887 6999999999999875
|
|
| >COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-114 Score=947.95 Aligned_cols=475 Identities=35% Similarity=0.578 Sum_probs=425.8
Q ss_pred cceEEEEEECCEEEEeccCCCCCcHHHHHhh-CCCCccccCCCCCCCCceEEEEccccccCCc-ccceeecccccchhcc
Q 000657 17 WTKEAILYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKK-CVHCAVNACLAPLYSL 94 (1370)
Q Consensus 17 ~~~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~-~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~-~~~~~v~sCl~~~~~~ 94 (1370)
.++.|+|.+||+.+.+++++|..|||||||. .+|||||+||.||+||||||||.+.. +|. ++|++||+||..+.++
T Consensus 5 ~~~~irf~lN~~~~~l~~v~P~~TlLd~LR~d~~ltGtKEGCAEGDCGACTVlVgrl~--~g~~l~yeSVNACirfl~sL 82 (493)
T COG4630 5 RRNTIRFLLNGETRVLSDVPPTTTLLDYLRLDRRLTGTKEGCAEGDCGACTVLVGRLV--DGGSLRYESVNACIRFLGSL 82 (493)
T ss_pred ccceeEEEecCceEEeecCCcchHHHHHHHHhcccccccccccCCCcCceEEEEEeec--CCCceeeeehhHHHHHHhhc
Confidence 4689999999999999999999999999996 59999999999999999999999864 344 9999999999999999
Q ss_pred CCcEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHH
Q 000657 95 EGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDA 174 (1370)
Q Consensus 95 ~g~~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a 174 (1370)
||++|+|||+|+.+++.||||||||+++|||||||||||||||+|+|..+++.| +.+.|+++|+|||||||||+||++|
T Consensus 83 ~G~hvvTvE~L~~~~g~LHpVQqamvd~hGSQCGfCTPGFVmSLyal~~~~~~P-~~a~i~kALqGNLCRCTGY~pI~~A 161 (493)
T COG4630 83 DGTHVVTVEHLRGQDGTLHPVQQAMVDFHGSQCGFCTPGFVMSLYALWMNSPTP-SRAAIEKALQGNLCRCTGYRPIIRA 161 (493)
T ss_pred CCceEEEehhhcCCCCCcCHHHHHHHhccCCccCCcCchHHHHHHHHHhcCCCC-chhHHHHHhhCCcccccCchHHHHH
Confidence 999999999999655569999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHhcccccccccCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCcccccccccCCCCCCCCCCCCCChh
Q 000657 175 FRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPE 254 (1370)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 254 (1370)
.+.++..... +. |.|..-..-..-+.
T Consensus 162 A~~~~a~~~~--------a~----------------------------------------------fDPl~~~R~~~~~~ 187 (493)
T COG4630 162 AEAIAALGPA--------AG----------------------------------------------FDPLAARRTAITAR 187 (493)
T ss_pred HHHHhccCCc--------cc----------------------------------------------CChhhhhHHHHHHH
Confidence 9977643211 00 00000000000011
Q ss_pred hhcc-CCCCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCc
Q 000657 255 LLLR-KSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDG 333 (1370)
Q Consensus 255 l~~~-~~~~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~ 333 (1370)
|..- ....+.+.+ +...+|.|.+++++..++++||++++|||+||+++|.++.+.+...+|.+++|+||+.|++..++
T Consensus 188 L~A~~~~e~v~~~~-~~~r~~~P~~l~D~a~l~aa~P~AtivAGsTDvgLwVtk~mr~l~~vi~v~~l~eL~~i~~~~~~ 266 (493)
T COG4630 188 LRALRDTETVEVGS-GDDRFIVPATLADFADLLAAHPGATIVAGSTDVGLWVTKQMRDLNPVIFVGHLAELRRIEVSTGG 266 (493)
T ss_pred HhhccCCcEEEecC-CCceeEeeccHHHHHHHHhhCCCCEEEecCcchhhHHHHHHhhcCCeEEecchhhhheeeecCCc
Confidence 2111 123344555 56789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEe
Q 000657 334 LEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVD 413 (1370)
Q Consensus 334 l~IGA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s 413 (1370)
|+|||++||+|....|.. .||.|.+.+.+|+|.||||+|||||||.|+||++|.+|+|+||||+|++.+
T Consensus 267 l~iGAgvt~t~a~~~la~-----------~~P~l~~L~~r~gg~qvRN~gTlGGNIangSPIGDtPPaLIALgA~ltLr~ 335 (493)
T COG4630 267 LEIGAGVTYTQAYRALAG-----------RYPALGELWDRFGGEQVRNMGTLGGNIANGSPIGDTPPALIALGATLTLRS 335 (493)
T ss_pred EEEccCccHHHHHHHHHh-----------hCchHHHHHHHhcchhhhccccccccccCCCcCCCCCchhhhcCcEEEEEe
Confidence 999999999999987654 356788999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEehhHhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEE
Q 000657 414 CKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALL 493 (1370)
Q Consensus 414 ~~g~~R~vpl~dF~~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rI 493 (1370)
.++ .|++||+|||.+|+|++++|||+|.+|+||.+.+...|..||++||+++||+.|.+||++.++++ +|.++||
T Consensus 336 g~~-~RtlPLe~~Fi~Y~kqdr~pGEfVe~v~vP~~~~~~rfa~yKisKRrdeDISAv~~Af~l~Ldg~----~V~~arI 410 (493)
T COG4630 336 GDG-RRTLPLEDYFIAYGKQDRQPGEFVEAVRVPLPAPSERFAAYKISKRRDEDISAVCGAFALDLDGG----RVADARI 410 (493)
T ss_pred cCC-cccccHHHHHHHhhhhccCcchhhhheecCCCCcchhhhhhhhhhhccchHHHHHhHheeeecCC----eeeeeee
Confidence 999 99999999999999999999999999999999888999999999999999999999999999976 8999999
Q ss_pred EEccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhhc
Q 000657 494 VYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQM 566 (1370)
Q Consensus 494 a~Ggva~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~~ 566 (1370)
+||||+.+|+||.++|++|.||+|++++++.|+.++..+++|-.+ .|+|++||..++++|++|||++.....
T Consensus 411 a~GGmAaTPkRA~~~EaAL~Gk~wteatve~A~aAl~~D~tPltD-~RAsaeYR~l~a~nlL~RfflEt~~~~ 482 (493)
T COG4630 411 AFGGMAATPKRASEVEAALLGKPWTEATVEAAAAALAGDFTPLTD-MRASAEYRALTAKNLLRRFFLETQGEA 482 (493)
T ss_pred ecCccccCccchHHHHHHHcCCCccHHHHHHHHHHHhcCCCcccc-hhhhHHHHHHHHHHHHHHHhhhccCCc
Confidence 999999999999999999999999999999999999999985443 479999999999999999999988754
|
|
| >TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-110 Score=1004.59 Aligned_cols=463 Identities=37% Similarity=0.634 Sum_probs=419.1
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEE
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHV 99 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i 99 (1370)
|+|+|||+++++++++|+++|++|||++ ||||||.||++|+||||||+|.++|+.+ +++|++||||++|+++++|++|
T Consensus 1 i~~~~Ng~~~~~~~~~~~~~ll~~lR~~~~l~g~k~gC~~G~CGaCtv~~~~~~~~~-~~~~~~v~sCl~~~~~~~g~~i 79 (467)
T TIGR02963 1 IRFFLNGETVTLSDVDPTRTLLDYLREDAGLTGTKEGCAEGDCGACTVVVGELVDGG-KLRYRSVNACIQFLPSLDGKAV 79 (467)
T ss_pred CEEEECCEEEEeecCCCCCCHHHHHHHhcCCCCCCcccCCCCCCceEEEEEecCCCC-cccceEEehhhhhHHhcCCCEE
Confidence 5799999999995599999999999996 9999999999999999999997776445 8999999999999999999999
Q ss_pred EEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHHHH
Q 000657 100 ITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFA 179 (1370)
Q Consensus 100 ~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~ 179 (1370)
+|||||++..+.+||||++|+++|++|||||||||||++++||++||.| +++||+++|+|||||||||++|++|++.++
T Consensus 80 ~TvEgl~~~~~~l~~~q~a~~~~~~~QCG~CtpG~vm~~~~ll~~~~~~-~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~ 158 (467)
T TIGR02963 80 VTVEDLRQPDGRLHPVQQAMVECHGSQCGFCTPGFVMSLYALYKNSPAP-SRADIEDALQGNLCRCTGYRPILDAAEAAF 158 (467)
T ss_pred EecCCCCCCCCCCCHHHHHHHHcCCCcCCCCchHHHHHHHHHHhcCCCC-CHHHHHHHhcCCcccCCCCHHHHHHHHHHH
Confidence 9999998435689999999999999999999999999999999999999 999999999999999999999999995443
Q ss_pred hcccccccccCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCcccccccccCCCCCCCCC-CCCCChhhhcc
Q 000657 180 KTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEK-ELIFPPELLLR 258 (1370)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~l~~~ 258 (1370)
. . .| +++|++. +++| ++|...
T Consensus 159 ~-~--------------------------~~------------------------------~~~~~~~~~~~~-~~l~~~ 180 (467)
T TIGR02963 159 D-Y--------------------------PC------------------------------SDPLDADRAPII-ERLRAL 180 (467)
T ss_pred h-C--------------------------CC------------------------------CCcCCcchhhhh-hHHHhc
Confidence 2 1 01 1123333 4556 334422
Q ss_pred -CCCCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEc
Q 000657 259 -KSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 337 (1370)
Q Consensus 259 -~~~~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IG 337 (1370)
...++.+.+ ++.+||+|+|++||+++|+++|++++||||||++++++++...++++|||++|+||+.|+.++++|+||
T Consensus 181 ~~~~~~~~~~-~~~~~~~P~sl~Ea~~ll~~~~~a~lvAGGTdl~~~~~~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IG 259 (467)
T TIGR02963 181 RAGETVELNF-GGERFIAPTTLDDLAALKAAHPDARIVAGSTDVGLWVTKQMRDLPDVIYVGQVAELKRIEETDDGIEIG 259 (467)
T ss_pred CCCcceeecC-CCceEECCCCHHHHHHHHhhCCCCEEEecCcchHHHHhcCCCCCCeEEECCCChhhccEEEcCCEEEEe
Confidence 234455554 568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCC
Q 000657 338 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGN 417 (1370)
Q Consensus 338 A~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~ 417 (1370)
|+||++|+.+.+++ .+|.|.+++++|||+||||+|||||||++++|+||++|+|+||||+|+|.+.+|
T Consensus 260 A~vT~~el~~~l~~-----------~~p~L~~a~~~ias~qIRN~aTiGGNI~~asP~sD~~p~LlALdA~v~l~~~~G- 327 (467)
T TIGR02963 260 AAVTLTDAYAALAK-----------RYPELGELLRRFASLQIRNAGTLGGNIANGSPIGDSPPALIALGARLTLRKGEG- 327 (467)
T ss_pred cCCcHHHHHHHHHH-----------HhHHHHHHHHHhCCHHHcCceecccccccCCCchHHHHHHHHcCCEEEEEcCCC-
Confidence 99999999876543 466799999999999999999999999999999999999999999999999999
Q ss_pred eEEEehhHhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEcc
Q 000657 418 IRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGG 497 (1370)
Q Consensus 418 ~R~vpl~dF~~g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Gg 497 (1370)
+|+||++|||.||+++.|+++|||++|+||.+..+.++.+||+++|+++|||+||+||++++++ + +|+++||+|||
T Consensus 328 ~R~vpl~dF~~g~~kt~L~~~EiI~~I~iP~~~~~~~~~~~K~~~R~~~dia~V~~A~~v~~~~-~---~i~~~ria~Gg 403 (467)
T TIGR02963 328 RRTLPLEDFFIDYGKTDRQPGEFVEALHVPRPTPGERFRAYKISKRFDDDISAVCAAFNLELDG-G---VVAEIRIAFGG 403 (467)
T ss_pred cEEEeHHHhhcccccccCCCCceEEEEEecCCCCCCceEEEEecccccccceeeEEEEEEEEcC-C---eEeEEEEEEec
Confidence 9999999999999999999999999999998766778899999999999999999999999974 4 89999999999
Q ss_pred CCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHH
Q 000657 498 VAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLW 561 (1370)
Q Consensus 498 va~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~ 561 (1370)
|+|+|+|++++|++|.||.|+++++++|.+++.+++.+.++ .++|++||++|+.+|++|||++
T Consensus 404 va~~p~r~~~~E~~L~G~~~~~~~l~~a~~~l~~~~~p~~d-~r~sa~YR~~la~~l~~r~~~~ 466 (467)
T TIGR02963 404 MAATPKRAAATEAALLGKPWNEATVEAAMAALAGDFTPLSD-MRASAEYRLLTAKNLLRRFFLE 466 (467)
T ss_pred CCCCceehHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCC-CCCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999964443 4699999999999999999986
|
Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and |
| >PF02738 Ald_Xan_dh_C2: Molybdopterin-binding domain of aldehyde dehydrogenase; InterPro: IPR008274 Aldehyde oxidase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-105 Score=995.92 Aligned_cols=524 Identities=35% Similarity=0.499 Sum_probs=435.5
Q ss_pred ccccccCCcccccccCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEE
Q 000657 747 ERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVV 826 (1370)
Q Consensus 747 ~~~~~~Gdv~~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVr 826 (1370)
.....+||++++| ++|+++||++|++|+++|++|||++|+|+|+ ++|+|+||++||+|+.+|..||++||||++|||
T Consensus 15 ~~~~~~GDve~af--~~a~~vve~~y~~~~~~h~~mEp~~~~A~~~-~~g~l~v~~~tQ~p~~~r~~va~~lglp~~~V~ 91 (547)
T PF02738_consen 15 ERHIERGDVEAAF--AEADHVVEAEYRTPRQAHAPMEPHGAVAWWD-EDGRLTVWSSTQWPFHVRRAVAEALGLPPEKVR 91 (547)
T ss_dssp EEEEEESSHHHHH--HHTSEEEEEEEEE-BB----SS-SEEEEEEE-TTTEEEEEES-SSHHHHHHHHHHHHTS-GGGEE
T ss_pred ccccccCCHHHHH--hhCCEEEEEEEEECCccccCCCCCeEEEEEc-cCCCEEEEECCcCHhHHHHHHhhhhcCChhHEE
Confidence 4567999999999 9999999999999999999999999999998 689999999999999999999999999999999
Q ss_pred EEecccCCCCCCCCccchHHHHHHHHHHHcCCCCEEEEeChHHHHhhcCCCccEEEEEEEeeCCCCcEEEEEEEEEecCC
Q 000657 827 CKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAG 906 (1370)
Q Consensus 827 V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVkl~~sR~E~~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~G 906 (1370)
|+.+++|||||.|. ....++++||++|+++||||||+|||+|+|+.+.+||++.+++|+|+|+||+|+|++++++.|+|
T Consensus 92 V~~~~~GGgFG~~~-~~~~~~~~aa~~a~~~grPVk~~~tR~e~~~~~~~r~~~~~~~~~g~~~dG~i~a~~~~~~~d~G 170 (547)
T PF02738_consen 92 VISPYVGGGFGKKK-QDSPIAVLAALAAKKTGRPVKLVWTREEDFRAGPKRPPTRIRVRAGADKDGKITALDHDIYADGG 170 (547)
T ss_dssp EEESB-S--TTTTS-STHHHHHHHHHHHHHHSSEEEEE--HHHHHHHS-BB-EEEEEEEEEE-TTS-EEEEEEEEEEEEE
T ss_pred EeeeecCCCCCCcc-ccchHHHHHHHHHhccCceEEEEechHHhcCCCCCccHHHhhhhheECCCCCEEEeeeeeeccCC
Confidence 99999999999333 23668899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHHHHHHhcCC
Q 000657 907 NSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQG 986 (1370)
Q Consensus 907 a~~~~~~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~Rl~Nl~~ 986 (1370)
+|.+++..++...+....++|+|||++++++.|+||++|.++|||||.+|+.||+|++||++|++|||||+|||++|+.+
T Consensus 171 a~~~~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~g~~Rg~G~~q~~fa~E~~~DelA~~lg~DP~e~R~~N~~~ 250 (547)
T PF02738_consen 171 AYASFSPAVAPRAGAGADGPYRIPNVRIDARAVYTNTPPAGAFRGFGAPQAAFALESFMDELAEKLGMDPLEFRLKNLID 250 (547)
T ss_dssp SS-TTHHHHHHHHHHTTTTTB--SEEEEEEEEEE-SSSSBE-STTTTHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHB-G
T ss_pred ccccccccchhhhhcccCCCcccccEEEEEEeccCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHhCcChHHHHHhcccc
Confidence 99999888888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCccccCCCHHH-HHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEEEEEecCC
Q 000657 987 EGSILHYGQQLQHCTLFP-LWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDG 1065 (1370)
Q Consensus 987 ~g~~~~~g~~~~~~~l~~-~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~l~~DG 1065 (1370)
+++.+++|..++++.+.+ ||+++++.++|.++.++.+.++..+.|++||+++++..++.++.....+.+++.|+|++||
T Consensus 251 ~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gig~~~~~~~~~~~~~~~~~~~a~v~l~~DG 330 (547)
T PF02738_consen 251 PGDRTPTGQPYDSGDYPEDCLEKAAEHSGWRRRQKEVREFGSGNGWRGRGIGLGCAMYGSGTGGGSGDQSSARVRLNPDG 330 (547)
T ss_dssp TTEB-TTS-BETS--HHHHHHHHHHHHHCHHHHHHHHHHCCHEESSEEEEEEEEEEEEEESTTSGGGSEEEEEEEE-TTS
T ss_pred cccccccCcccccCcHHHHHHHHHHhhhchhhhhhHHhhccccccccccccCCCccccccccccccccCCcEEEEEEeCC
Confidence 999999999999999998 9999999999999998888888888899999999988888777554456789999999999
Q ss_pred cEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhh
Q 000657 1066 TVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK 1145 (1370)
Q Consensus 1066 sV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~a~~ 1145 (1370)
+|+|.+|.+|||||++|+++|||||+||||+++|+|..+||+.+|++++|+|||++++.|.|+++||++||+||.+.++.
T Consensus 331 ~v~v~~~~~e~GqG~~T~~~qiaAe~Lgi~~~~V~v~~~dT~~~p~~~~t~gSr~t~~~g~Av~~Aa~~lr~~l~~~Aa~ 410 (547)
T PF02738_consen 331 SVTVYTGGVEMGQGSRTALAQIAAEELGIPPEDVRVVSGDTDTTPYDGGTGGSRSTYMSGNAVRKAAEDLREKLLEIAAE 410 (547)
T ss_dssp -EEEEES--BSSSSHHHHHHHHHHHHHTS-GGGEEEEECBTTTS-SB--S-TTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecccCCcchhhhHHHHHHHHhCCChhhEEEEeCCCcCCCCCCCCccchhhHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CC-----CCCHHHH--HHHhhcccccceEEEEeecCCccccccCC-CCCCcccccEEEEEEEEEeeCCCCcEEEEEEEEE
Q 000657 1146 HN-----FNSFAEL--ASACYVQRIDLSAHGFYITPEIDFDWITG-KGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVI 1217 (1370)
Q Consensus 1146 ~~-----~~~~~~~--~~~a~~~~~~l~~~g~~~~~~~~~~~~~~-~~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~~ 1217 (1370)
+. ++.|++- ........+.+.+...+..+...++...+ .+..+.+++||++++|||||++||+++|+|++++
T Consensus 411 ~~~~~~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~eVeVD~~TG~v~v~~~~~~ 490 (547)
T PF02738_consen 411 ILGVDPEDLELEDGRVISPAKGVSISEAAIAAYANPPTGFDPGTGGYGPPASYYSFGAHFAEVEVDTETGEVRVLRVVAA 490 (547)
T ss_dssp HTTSSGGGEECHCHETHHHHHHEEHHHEEEHHHCTTSTTCETTTTEESBSSSEEEEEEEEEEEEEETTTSEEEEEEEEEE
T ss_pred hcccccchhhhhhhccccccccccccccccccccccccccccccccccCCccceeeeeeecccccccccccccceeeeee
Confidence 63 3445554 33333333444444443333323333321 3567788999999999999999999999999999
Q ss_pred EecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCC
Q 000657 1218 LDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVP 1281 (1370)
Q Consensus 1218 ~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP 1281 (1370)
+|||++|||++++|||+||++||||++|+|++.||+ +|+++|.+|++|++|++.|+|
T Consensus 491 ~D~G~~iNP~~v~gQi~Gg~~~Glg~al~E~~~~d~-------~G~~~~~~~~dY~ip~~~d~P 547 (547)
T PF02738_consen 491 HDCGRVINPDIVEGQIEGGIVQGLGYALYEELVYDE-------NGRPLNPNFADYKIPTAADVP 547 (547)
T ss_dssp EEEBS-SBHHHHHHHHHHHHHHHHHHHHT--BEBTT-------TSEBSTSSTTTST---GGGS-
T ss_pred ccCCcccCHHHHhhhccccHHHHHHHHhcCCeEECC-------CCcCCCCChhhCcCCCccccC
Confidence 999999999999999999999999999999999996 899999999999999999998
|
2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3NVZ_C 3NVY_C 1FO4_B 3NRZ_L 3AM9_A 3B9J_C 3AX7_B 3NVW_L 3BDJ_A 3ETR_N .... |
| >PRK09971 xanthine dehydrogenase subunit XdhB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-56 Score=511.11 Aligned_cols=279 Identities=25% Similarity=0.378 Sum_probs=261.2
Q ss_pred eEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeec-CCcEEEcccccHHHHHHHHH
Q 000657 272 KWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVK-DDGLEIGAAVRLTELLKMFR 350 (1370)
Q Consensus 272 ~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~-~~~l~IGA~vTl~~l~~~l~ 350 (1370)
+|++|+|++|++++|++++++++|+||||++++++++...|+++|||++|+||+.|+.. +++|+|||+||+++|+++
T Consensus 6 ~~~~P~sl~Ea~~ll~~~~~a~ivaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~I~~~~~~~l~IGA~vt~~~l~~~-- 83 (291)
T PRK09971 6 EYHEAATLEEAIELLADNPQAKLIAGGTDVLIQLHHHNDRYRHLVSIHNIAELRGITLAEDGSIRIGAATTFTQIIED-- 83 (291)
T ss_pred ceeCCCCHHHHHHHHHhCCCCEEEeccchHHHHHhCCCCCCCeEEEcCCChhhhCeEecCCCEEEEEeCCcHHHHhcC--
Confidence 89999999999999999999999999999999999999999999999999999999965 467999999999999984
Q ss_pred HhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhccc
Q 000657 351 KVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGY 430 (1370)
Q Consensus 351 ~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~g~ 430 (1370)
+.+. ..|+.|.+++++|||+||||+||||||||+++|.||++|+|+||||+|+|.+.+| +|++|++|||.|+
T Consensus 84 ~~i~-------~~~p~L~~a~~~ia~~qIRN~aTiGGNi~~a~p~sD~~~~Llal~A~v~i~~~~g-~R~vp~~df~~g~ 155 (291)
T PRK09971 84 PIIQ-------KHLPALAEAAVSIGGPQIRNVATIGGNICNGATSADSAPPLFALDAKLEIHSPNG-VRFVPINGFYTGP 155 (291)
T ss_pred hHHH-------HHhHHHHHHHHHhCCHHHhcceecccccccCCcchhHHHHHHHcCCEEEEEcCCC-cEEEEHHHhcCCc
Confidence 3343 3588999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred ccccCCCCeEEEEEEccCCC-CccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHHH
Q 000657 431 RKVDLTSGEILLSIFLPWTR-PFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTK 509 (1370)
Q Consensus 431 ~~~~L~~~Eil~~I~iP~~~-~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~E 509 (1370)
+++.|+++|||++|+||.+. .+..+.+||+++|+++|||+||+|+.+++++ + +|+++||+||||+|+|+|++++|
T Consensus 156 ~~t~l~~~Eil~~I~iP~~~~~~~~~~~~K~~~R~~~~~a~v~~a~~~~~~~-g---~i~~~ria~G~v~~~p~r~~~~E 231 (291)
T PRK09971 156 GKVSLEHDEILVAFIIPPEPYEHAGGAYIKYAMRDAMDIATIGCAVLCRLDN-G---NFEDLRLAFGVAAPTPIRCQHAE 231 (291)
T ss_pred cccccCCCceEEEEEeCCCCCCCCceEEEEEcccchhhHhHheeEEEEEEcC-C---EEEEEEEEEEcccCceeeHHHHH
Confidence 99999999999999999753 3456778999999999999999999999964 4 89999999999999999999999
Q ss_pred HHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhh
Q 000657 510 TFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQ 565 (1370)
Q Consensus 510 ~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~ 565 (1370)
++|.|+.|++++++++.+++.+++.|.++ +++|++||++|+.+|++|++.++..+
T Consensus 232 ~~L~G~~~~~~~~~~a~~~~~~~~~p~~d-~~~s~~YR~~l~~~l~~r~l~~~~~~ 286 (291)
T PRK09971 232 QTAKGAPLNLETLEAIGELVLQDVAPRSS-WRASKEFRLHLIQELTKRVIKEAVAA 286 (291)
T ss_pred HHhCCCCCCHHHHHHHHHHHHhcCCCCCC-CCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987665 78999999999999999999998764
|
|
| >PRK09908 xanthine dehydrogenase subunit XdhC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-54 Score=435.33 Aligned_cols=150 Identities=39% Similarity=0.659 Sum_probs=141.4
Q ss_pred ceEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCc
Q 000657 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97 (1370)
Q Consensus 18 ~~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 97 (1370)
.+.|+|+|||++++++ ++|+++|++|||+.||||||.||++|+||||||+||+ ++|+||++|+.+++|+
T Consensus 6 ~~~i~~~vNG~~~~~~-~~~~~~Ll~~LR~~gltgtK~GC~~G~CGACtVlvdg----------~~v~SCl~~a~~~~G~ 74 (159)
T PRK09908 6 TITIECTINGMPFQLH-AAPGTPLSELLREQGLLSVKQGCCVGECGACTVLVDG----------TAIDSCLYLAAWAEGK 74 (159)
T ss_pred ceeEEEEECCEEEEEe-cCCCCcHHHHHHHcCCCCCCCCcCCCCCCCcEEEECC----------cEeehhHhhHHHhCCC
Confidence 3569999999999996 9999999999998899999999999999999999996 7999999999999999
Q ss_pred EEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCC-CCCHHHHHHHhcCcccccCCChhHHHHHH
Q 000657 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQT-PPTEEQIEESLAGNLCRCTGYRPIVDAFR 176 (1370)
Q Consensus 98 ~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~-~~~~~~i~~~l~gnlCRCtgy~~i~~a~~ 176 (1370)
+|+|||||+ ..+.+||||+||+++|++|||||||||||++++||++++. |++++||+++|+|||||||||++|++|++
T Consensus 75 ~V~TiEGl~-~~~~l~pvQ~Af~~~~a~QCGyCtPG~ims~~aLl~~~~~~~~s~~eI~~al~GNlCRCTGY~~I~~Av~ 153 (159)
T PRK09908 75 EIRTLEGEA-KGGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVL 153 (159)
T ss_pred EEEeecCCC-CCCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCCCCCHHHHHHHHcCCccCCCCCHHHHHHHH
Confidence 999999998 5678999999999999999999999999999999999863 33999999999999999999999999998
Q ss_pred HHH
Q 000657 177 VFA 179 (1370)
Q Consensus 177 ~~~ 179 (1370)
.+-
T Consensus 154 ~~~ 156 (159)
T PRK09908 154 DCE 156 (159)
T ss_pred HHh
Confidence 654
|
|
| >TIGR03193 4hydroxCoAred 4-hydroxybenzoyl-CoA reductase, gamma subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-54 Score=431.33 Aligned_cols=146 Identities=44% Similarity=0.772 Sum_probs=140.4
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEE
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHV 99 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i 99 (1370)
|+|+|||++++++ ++|+++|++|||++ ||||+|.||++|+||||||+||+ ++|+||++|+.+++|++|
T Consensus 2 i~~~vNG~~~~~~-~~~~~~Ll~~LR~~lgltg~K~gC~~G~CGACtVlvdg----------~~v~SCl~~~~~~~G~~V 70 (148)
T TIGR03193 2 LRLTVNGRWREDA-VADNMLLVDYLRDTVGLTGTKQGCDGGECGACTVLVDG----------RPRLACSTLAHRVAGRKV 70 (148)
T ss_pred EEEEECCEEEEee-cCCCCcHHHHHHHhcCCCCCCCCCCCCCCCCCEEEECC----------eEeeccHhhHhhcCCCcE
Confidence 7899999999986 99999999999996 99999999999999999999996 799999999999999999
Q ss_pred EEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHHHH
Q 000657 100 ITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFA 179 (1370)
Q Consensus 100 ~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~ 179 (1370)
+|||||+ ..+.+||+|+||+++|++|||||||||||++++||++||.| +++||+++|+|||||||||++|++|++.++
T Consensus 71 ~TiEgl~-~~~~l~pvq~af~~~~a~QCGfCtPG~vms~~~ll~~~p~p-s~~ei~~al~GnLCRCTGY~~I~~Av~~aa 148 (148)
T TIGR03193 71 ETVEGLA-TNGRLSRLQQAFHERLGTQCGFCTPGMIMAAEALLRRNPSP-SRDEIRAALAGNLCRCTGYVKIIESVEAAA 148 (148)
T ss_pred EEeCCCC-CCCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCC-CHHHHHHHHcCCccCCCCCHHHHHHHHHhC
Confidence 9999998 56789999999999999999999999999999999999999 999999999999999999999999998763
|
4-hydroxybenzoyl-CoA reductase converts 4-hydroxybenzoyl-CoA to benzoyl-CoA, a common intermediate in the degradation of aromatic compounds. This protein family represents the gamma chain of this three-subunit enzyme. |
| >TIGR03195 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-52 Score=479.65 Aligned_cols=277 Identities=21% Similarity=0.275 Sum_probs=253.3
Q ss_pred CceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHH
Q 000657 270 GLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 349 (1370)
Q Consensus 270 ~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l 349 (1370)
.|+|++|+|++||++++++++++++|+|||||+++++.+...|+++|||++||||+.|+.++++|+|||+||+++|+++
T Consensus 4 ~f~~~~P~sl~eA~~ll~~~~~a~ivaGGTdl~~~~~~~~~~p~~lIdi~~I~eL~~I~~~~~~l~IGA~vT~~~l~~~- 82 (321)
T TIGR03195 4 DFRTLRPASLADAVAALAAHPAARPLAGGTDLLPNLRRGLGQPETLVDLTGIDEIAQLSTLADGLRIGAGVTLAALAED- 82 (321)
T ss_pred CceEECCCCHHHHHHHHhhCCCCEEEEccchHHHHHhcccCCCCeEEECCCChhhccEEecCCEEEEeccCcHHHHhhC-
Confidence 5899999999999999999999999999999999999998999999999999999999999999999999999999886
Q ss_pred HHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc--------------------------------------c
Q 000657 350 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC--------------------------------------T 391 (1370)
Q Consensus 350 ~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~--------------------------------------~ 391 (1370)
..++ ..|+.|.++++.|||+||||+|||||||| +
T Consensus 83 -~~i~-------~~~p~L~~a~~~ias~qIRN~aTiGGNi~~~~~c~~~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~c~ 154 (321)
T TIGR03195 83 -ALVR-------TRWPALAQAARAVAGPTHRAAATLGGNLCLDTRCIYYNQSEWWRSGNGYCLKYRGDKCHVAPKSDRCY 154 (321)
T ss_pred -hhhH-------hHhHHHHHHHHHhCCHHHhCceecHHhhhccCCCcccccccccccccccccccCCccccccCCCcccc
Confidence 3343 35899999999999999999999999999 5
Q ss_pred cCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhcc--cccccCCCCeEEEEEEccCCCCccceeeeeecccCccccc
Q 000657 392 ASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLG--YRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIA 469 (1370)
Q Consensus 392 asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~g--~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a 469 (1370)
++|+||++|+|+||||+|+|.+.+| +|+||++|||.| ++++.|+++|||++|+||.+ ....+.|+|+.+|...||+
T Consensus 155 a~p~sD~~~~LlAldA~v~i~~~~g-~R~vpl~dF~~~~g~~~t~L~~~Eiit~I~iP~~-~~~~~~y~k~~~r~a~~~~ 232 (321)
T TIGR03195 155 AAFSGDVAPALLVLDAEAEIVGPAG-VRRVPLAELYVEDGAAHLTLEPGEVLAAVRVPPT-GGWTSAYSKVRVRGAIDFP 232 (321)
T ss_pred CCCchHHHHHHHHcCCEEEEEeCCc-cEEEEHHHHhcccCCccccCCCCCeEEEEEecCC-CCCccEEEEEecCccccce
Confidence 7789999999999999999999999 999999999995 45799999999999999975 3345566788888899999
Q ss_pred eeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHH
Q 000657 470 LVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKS 549 (1370)
Q Consensus 470 ~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~ 549 (1370)
++++|+.+++++ + +|+++||+||||+++|+|++++ ++|.|+.|+++++++|.+++.+++.+.++ .++|++||++
T Consensus 233 ~~~vav~l~~~~-~---~i~~~ria~Ggva~~p~r~~~~-e~l~G~~~~~~~~~~a~~~~~~~~~p~~d-~~~s~~YRr~ 306 (321)
T TIGR03195 233 LAGVAVALQRDG-D---RIAGLRVALTGTNSRPLMVPGT-DALAGRPLDDAAAEEIARLVRKTSQPMRT-TLMGVKYRRR 306 (321)
T ss_pred eEEEEEEEEeCC-C---eEEEEEEEEECccCceeehHHH-HHhcCCCCCHHHHHHHHHHHHhhCCCccC-CCCCHHHHHH
Confidence 999999998874 4 8999999999999999999999 55799999999999999999999986655 4699999999
Q ss_pred hhHHHHHHHHHHHh
Q 000657 550 LTLSFFFKFFLWVS 563 (1370)
Q Consensus 550 la~~L~~k~l~~~~ 563 (1370)
|+.+|++|++.++.
T Consensus 307 l~~~l~~r~~~~~~ 320 (321)
T TIGR03195 307 VLLAIARRLVDQLW 320 (321)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
|
This model represents the second largest chain, beta, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA. |
| >COG2080 CoxS Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-52 Score=419.69 Aligned_cols=150 Identities=49% Similarity=0.829 Sum_probs=144.3
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 97 (1370)
+.|+|+|||++++++ ++|+++|+|+|||. +|||||.||+.|.||||||++|+ ++|+||++|+++++|+
T Consensus 2 ~~i~ltvNG~~~~~~-~~p~~~Ll~~LRd~l~ltgtk~GC~~g~CGACtVlvDG----------~~v~SCl~~a~~~~G~ 70 (156)
T COG2080 2 MPITLTVNGEPVELD-VDPRTPLLDVLRDELGLTGTKKGCGHGQCGACTVLVDG----------EAVNSCLTLAVQAEGA 70 (156)
T ss_pred CcEEEEECCeEEEEE-eCCCChHHHHHHHhcCCCCcCCCCCCccCCceEEEECC----------eEehHHHHHHHHhCCC
Confidence 679999999999997 99999999999996 99999999999999999999996 8999999999999999
Q ss_pred EEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHH
Q 000657 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV 177 (1370)
Q Consensus 98 ~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~ 177 (1370)
+|+|||||+.++..|||+|+||++++++|||||||||||++++||+++|.| +++||+++|+||+||||||..|++|++.
T Consensus 71 ~ItTiEGl~~~~~~l~~vQ~Af~e~~~~QCGyCtpG~Imsa~~lL~~~~~p-s~~eI~~~lsGnlCRCt~Y~~I~~Ai~~ 149 (156)
T COG2080 71 EITTIEGLAKKDGGLHPVQQAFLEHDAFQCGYCTPGQIMSATALLDRNPAP-TDEEIREALSGNLCRCTGYQNIVAAILD 149 (156)
T ss_pred eEEEeecccCCCCCcCHHHHHHHHcCCCcCCCCcHHHHHHHHHHHHhCCCC-CHHHHHHHHhcCccccCCHHHHHHHHHH
Confidence 999999999555678999999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred HHh
Q 000657 178 FAK 180 (1370)
Q Consensus 178 ~~~ 180 (1370)
++.
T Consensus 150 aa~ 152 (156)
T COG2080 150 AAE 152 (156)
T ss_pred HHH
Confidence 874
|
|
| >TIGR03199 pucC xanthine dehydrogenase C subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-51 Score=464.81 Aligned_cols=261 Identities=22% Similarity=0.332 Sum_probs=241.9
Q ss_pred cCCHHHHHHHHhhCCCcEEEeccCcceeeeeec-ccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHHHHhhh
Q 000657 276 PLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLK-RMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVT 354 (1370)
Q Consensus 276 P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~-~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~i~ 354 (1370)
|+||+||+++|+++++++++|||||+++.++.+ ...|+++|||++|+||+.|+.++++|+|||+||+++|+++ ..+.
T Consensus 1 P~sl~ea~~ll~~~~~a~ivaGgT~l~~~~~~~~~~~~~~lIdi~~i~eL~~I~~~~~~l~IGA~vt~~~l~~~--~~i~ 78 (264)
T TIGR03199 1 PAALDEAWSLLEKAPDSTFVSGSTLLQLQWEKGTLPMKQHLVSLEGIDELKGISTSDTHVSIGALTTLNECRKN--PLIK 78 (264)
T ss_pred CCCHHHHHHHHHhCCCCEEEEccChHHHHHhcCcCCCCCeEEEcCCChhhCcEEecCCEEEEecCCcHHHHhhC--hHhH
Confidence 899999999999999999999999999998777 4668999999999999999999999999999999999864 2222
Q ss_pred cCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhccccccc
Q 000657 355 ERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVD 434 (1370)
Q Consensus 355 ~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~g~~~~~ 434 (1370)
+.|+.|++++++|||+||||+||+|||||++ .||++|+|+||||+|+|.+ +| +|+||++|||++ ++
T Consensus 79 -------~~~p~L~~a~~~ia~~qIRN~aTlGGNl~~~--~sD~~p~Llal~A~v~i~~-~g-~r~vp~~~f~~~---~~ 144 (264)
T TIGR03199 79 -------RALPCFVDAASAIAAPGVRNRATIGGNIASG--IGDFIPALLVLGAELIVYQ-KE-LIRLPLGAWLSE---ED 144 (264)
T ss_pred -------hHhHHHHHHHHHhcCHHHhcceecHHhccCc--ccchHHHHHHcCCEEEEEe-CC-EEEEEHHHhhhc---cC
Confidence 4689999999999999999999999999998 7999999999999999999 88 999999999984 58
Q ss_pred CCCCeEEEEEEc-cCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHHHHHhc
Q 000657 435 LTSGEILLSIFL-PWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIV 513 (1370)
Q Consensus 435 L~~~Eil~~I~i-P~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~E~~L~ 513 (1370)
|.++|||++|+| |.+.++.++.+||+++|..+++++||+|+.+++++++ +|+++||+||||+|+|+|++++|++|.
T Consensus 145 l~~~Eii~~I~i~p~~~~~~~~~~~k~~~R~~~~~a~v~~a~~~~~~~~~---~i~~~ria~Ggv~~~p~r~~~~E~~L~ 221 (264)
T TIGR03199 145 FKPTAIVTRVIIGPRAETGEFVFYHKVGRRETFTGSLVVVAGRFLLDGSQ---TIKEIRLAVGGADITPRRLLDSEAKLM 221 (264)
T ss_pred CCCCcEEEEEEEECCCCCCCcEEEEEEeccchhHHHHheeeEEEEEcCCC---eEEEEEEEeecCCCceeeHHHHHHHhc
Confidence 999999999999 7665567788999999999999999999999998666 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHH
Q 000657 514 GKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFF 556 (1370)
Q Consensus 514 Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~ 556 (1370)
||+|++++++++.+.+.+++.+.+ ++++|++||++|+++|+.
T Consensus 222 G~~~~~~~~~~a~~~~~~~~~p~~-d~~~s~~YR~~l~~~~~~ 263 (264)
T TIGR03199 222 APPWDPHLLAELYKTIIQELPFSS-DPFATAAYRKKVAANVIV 263 (264)
T ss_pred CCCCCHHHHHHHHHHHHhhCCCCC-CCCCCHHHHHHHHHHHhc
Confidence 999999999999999999998665 578999999999999874
|
This gene has been characterized in B. subtilis as the FAD binding-subunit of xanthine dehydrogenase (pucC), acting in conjunction with pucD, the molybdopterin-binding subunit and pucE, the FeS-binding subunit. |
| >TIGR03198 pucE xanthine dehydrogenase E subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-52 Score=421.87 Aligned_cols=146 Identities=38% Similarity=0.778 Sum_probs=140.7
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcE
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMH 98 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 98 (1370)
.|+|+|||++++++ ++|+++|++|||+. +|||||.||++|.||||||+||+ ++|+||++|+.+++|++
T Consensus 3 ~i~f~vNG~~~~~~-~~~~~~Ll~~LR~~~~ltgtK~gC~~G~CGACtVlvdG----------~~v~SCl~~~~~~~G~~ 71 (151)
T TIGR03198 3 QFRFTVNGQAWEVA-AVPTTRLSDLLRKELQLTGTKVSCGIGRCGACSVLIDG----------KLANACLTMAYQADGHE 71 (151)
T ss_pred cEEEEECCEEEEee-cCCCcHHHHHHHhccCCCCCCCCCCCCcCCccEEEECC----------cEEechHHHHHHhcCCE
Confidence 48999999999996 89999999999996 99999999999999999999996 69999999999999999
Q ss_pred EEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHHH
Q 000657 99 VITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVF 178 (1370)
Q Consensus 99 i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~ 178 (1370)
|+|||||+ .+.+||+|+||+++|++|||||||||||++++||+++|.| +++||+++|+|||||||||++|++|++++
T Consensus 72 v~TiEgl~--~~~l~pvQ~af~~~~a~QCGfCtpG~im~~~~ll~~~p~p-~~~ei~~al~gnlCRCtgY~~I~~Av~~~ 148 (151)
T TIGR03198 72 ITTIEGIA--ENELDPCQTAFLEEGGFQCGYCTPGMVVALKALFRETPQP-SDEDMEEGLSGNLCRCTGYGGIIRSACRI 148 (151)
T ss_pred EEecCCcC--CCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHcCCCC-CHHHHHHHHcCCCcCCCCCHHHHHHHHHH
Confidence 99999997 3679999999999999999999999999999999999999 99999999999999999999999999988
Q ss_pred H
Q 000657 179 A 179 (1370)
Q Consensus 179 ~ 179 (1370)
+
T Consensus 149 ~ 149 (151)
T TIGR03198 149 R 149 (151)
T ss_pred h
Confidence 6
|
This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component. |
| >COG1319 CoxM Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-50 Score=450.38 Aligned_cols=279 Identities=28% Similarity=0.399 Sum_probs=257.4
Q ss_pred CceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCc-EEEcccccHHHHHHH
Q 000657 270 GLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDG-LEIGAAVRLTELLKM 348 (1370)
Q Consensus 270 ~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~-l~IGA~vTl~~l~~~ 348 (1370)
.|+|++|+|++||+.+++.++++++++|||+|...||.+...|..+|||++++++..+...+++ |+|||+||+++|.++
T Consensus 3 ~f~y~rp~Sv~eA~~ll~~~~~a~~laGGt~L~~~~k~~~~~p~~lVdI~~l~~~~~~~~~~g~~l~IGA~vt~~ei~~~ 82 (284)
T COG1319 3 NFEYYRPASVEEALNLLARAPDAKYLAGGTDLLPLMKLGIERPDHLVDINGLDELLGIVTTEGGSLRIGALVTLTEIARH 82 (284)
T ss_pred ceEEECCCCHHHHHHHHHhCCCcEEeeCcchHHHHhhcccCCcceEEEecCChhhhceEeecCCEEEEeecccHHHHHhC
Confidence 4899999999999999999999999999999999999999999999999999988888877666 999999999999987
Q ss_pred HHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhc
Q 000657 349 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFL 428 (1370)
Q Consensus 349 l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~ 428 (1370)
..++ ..||.|.+++..+||+||||+||||||||+++|.+|++|+|+||||+|++.+..| +|++|++|||.
T Consensus 83 --~~~~-------~~~p~L~ea~~~ia~~qvRN~aTiGGn~c~a~p~aD~~~aLlaLdA~v~~~~~~g-~r~i~~~~f~~ 152 (284)
T COG1319 83 --PAVR-------RIPPALSEAASAIASPQVRNRATIGGNLCNADPAADLAPALLALDAEVEIRSPGG-ERTIPIEDFFR 152 (284)
T ss_pred --hhhh-------hhchHHHHHHHHhcChhhcceeeecchhccCCCchhhHHHHHHcCCEEEEecCCc-cEEEEHHHhhc
Confidence 4344 4689999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHH
Q 000657 429 GYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKT 508 (1370)
Q Consensus 429 g~~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~ 508 (1370)
|+.+|.|++|||||+|+||.+..+..+.+.|+.+|...+++.|.+|..++.+ +|.++||+|||++++|+|+.++
T Consensus 153 ~p~~t~l~~gelit~v~lP~~~~~~~~~~kk~r~r~~~~~~~vsvA~~~~~~------~v~~~RvAlgg~a~~p~R~~~~ 226 (284)
T COG1319 153 GPGETALEPGELITAVILPPPPAARGAYYKKVRRRASFAIALVSVAAKLRGD------RVSEARVALGGVAPKPWRLEDA 226 (284)
T ss_pred CccccccCCCcEEEEEEcCCCccCCccEEEEeecchhhhHHHHHHHhhhccc------ceeeeeeeecccCCcceehHHH
Confidence 9999999999999999999984334444446666788999999999998765 6899999999999999999999
Q ss_pred HHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhh
Q 000657 509 KTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQ 565 (1370)
Q Consensus 509 E~~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~ 565 (1370)
|+.|.|+++++++++.+.+.+.+++.|.+ ++++|++||++|+++++.|.+.++..+
T Consensus 227 E~~L~~~~l~~~~~~~~~~~~~~~~~p~~-d~r~s~~yr~~l~~~~~~ral~~a~~~ 282 (284)
T COG1319 227 EAALLGKPLSLETLEAAAEAAMQEAAPIS-DVRGSAEYRRKLAKVLLARALAEAQGR 282 (284)
T ss_pred HHHhhCCCCChHHHHHHHHHhhcccCCcc-cccchHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999998766 679999999999999999999998764
|
|
| >PRK11433 aldehyde oxidoreductase 2Fe-2S subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-50 Score=427.10 Aligned_cols=152 Identities=41% Similarity=0.721 Sum_probs=144.1
Q ss_pred CcceEEEEEECCEEEEeccCCCCCcHHHHHhhC-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhcc
Q 000657 16 GWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL 94 (1370)
Q Consensus 16 ~~~~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~ 94 (1370)
+....|+|+|||++++++ ++|+++||++||++ +|||+|.||++|.||||||+||+ ++++||++++.++
T Consensus 47 ~~~~~i~~~VNG~~~~~~-v~~~~tLLd~LR~~l~ltGtK~GC~~G~CGACTVlVdG----------~~v~SCl~la~~~ 115 (217)
T PRK11433 47 PEISPVTLKVNGKTEQLE-VDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVLVNG----------RRLNACLTLAVMH 115 (217)
T ss_pred CcCceEEEEECCEEEEEe-cCCCCcHHHHHHHhcCCCCCCCCCCCCCcCceEEEECC----------EEeeeeeeehhhc
Confidence 345789999999999996 99999999999996 99999999999999999999996 7899999999999
Q ss_pred CCcEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHc---------------CCCCCCHHHHHHHhc
Q 000657 95 EGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRS---------------SQTPPTEEQIEESLA 159 (1370)
Q Consensus 95 ~g~~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~---------------~~~~~~~~~i~~~l~ 159 (1370)
+|++|+|||||+ ..+.+||+|+||+++|++|||||||||||++++||++ +|.| +++||+++|+
T Consensus 116 ~G~~ItTiEGL~-~~~~lhpvQ~Af~~~~a~QCGyCTPG~imsa~alL~~~~~~~~~~~~~~~~~~p~p-t~~eIreals 193 (217)
T PRK11433 116 QGAEITTIEGLG-SPDNLHPMQAAFVKHDGFQCGYCTPGQICSSVAVLKEIKDGIPSHVTVDLTAAPEL-TADEIRERMS 193 (217)
T ss_pred CCCEEEEeCCcC-CCCCCCHHHHHHHHcCCCcCCCCCccHHHHHHHHHHhccccCccccccccccCCCC-CHHHHHHHHc
Confidence 999999999998 5678999999999999999999999999999999998 6778 9999999999
Q ss_pred CcccccCCChhHHHHHHHHHh
Q 000657 160 GNLCRCTGYRPIVDAFRVFAK 180 (1370)
Q Consensus 160 gnlCRCtgy~~i~~a~~~~~~ 180 (1370)
|||||||||++|++|++.++.
T Consensus 194 GNlCRCtgY~~Iv~Av~~~a~ 214 (217)
T PRK11433 194 GNICRCGAYSNILEAIEDVAG 214 (217)
T ss_pred CCccCCCCcHHHHHHHHHHHh
Confidence 999999999999999999874
|
|
| >PRK09799 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-47 Score=428.20 Aligned_cols=250 Identities=20% Similarity=0.336 Sum_probs=221.8
Q ss_pred eEEecCCHHHHHHHHhhCC-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHHH
Q 000657 272 KWYRPLKLQHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFR 350 (1370)
Q Consensus 272 ~~~~P~sl~e~l~ll~~~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l~ 350 (1370)
+|++|+|++|+++++++++ +++++||||||++.+ +...|+++|||++| ||++|+.++++|+|||+||+++|+++.
T Consensus 4 ~y~~P~sl~Ea~~ll~~~~~~a~ilAGGT~L~~~~--~~~~~~~lIdi~~i-eL~~I~~~~~~l~IGA~vT~~~l~~~~- 79 (258)
T PRK09799 4 QFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATP--TRTDKKIAISLQDL-ELDWIEWDNGALRIGAMSRLQPLRDAR- 79 (258)
T ss_pred cEeCCCCHHHHHHHHHhCCCCCEEEecCCChHhhh--CCCCCCEEEEcCCC-CCCeEEecCCEEEEccCCcHHHHHhCc-
Confidence 7999999999999999995 699999999998764 45578999999999 999999999999999999999998762
Q ss_pred HhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhccc
Q 000657 351 KVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGY 430 (1370)
Q Consensus 351 ~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~g~ 430 (1370)
.+ -+.|+++++.+||+||||+||||||||+++|.||++|+|+||||+|+|.+. |++|++|||.|+
T Consensus 80 -~~----------~~~L~~a~~~vas~qIRN~aTiGGNl~~a~p~sD~~p~LlAldA~v~l~~~----r~vpl~~f~~g~ 144 (258)
T PRK09799 80 -FI----------PAALREALGFVYSRHLRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNG----ETLSIEDYLACP 144 (258)
T ss_pred -cc----------HHHHHHHHHHhCCHHHhccchhHHHhhcCCccHHHHHHHHHcCCEEEEecC----cEEeHHHhcCCC
Confidence 11 137999999999999999999999999999999999999999999999873 799999999984
Q ss_pred ccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHHHH
Q 000657 431 RKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKT 510 (1370)
Q Consensus 431 ~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~E~ 510 (1370)
++|||++|+||.+. ..+.+||++ |+.+|+|+||+|+++++++ .+||+||||+++|+|++++|+
T Consensus 145 ------~~Eil~~I~iP~~~--~~~~~~K~~-r~~~~~a~v~~A~~~~~~~--------~~ria~Ggv~~~p~r~~~~E~ 207 (258)
T PRK09799 145 ------CDRLLTEIIIPDPY--RTCATRKIS-RSQAGLTVVTAAVALTDHD--------GMRIALDGVASKPLRLHDVEK 207 (258)
T ss_pred ------CCcEEEEEEcCCCC--CcceEEEec-ccccChhhheeEEEEEEcC--------CeEEEEECCCCcccchHHHhc
Confidence 79999999999753 456788996 8889999999999998752 389999999999999999999
Q ss_pred HhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhhh
Q 000657 511 FIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQ 565 (1370)
Q Consensus 511 ~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~~ 565 (1370)
|.++++++.++++ +++.+.++ .++|++||++++.+|+.|+|.++.+.
T Consensus 208 ----~~~~~~~~~~a~~---~~~~p~~d-~~~s~~YR~~~~~~l~~r~l~~~~~~ 254 (258)
T PRK09799 208 ----QNLEGNALEQAVA---NAIFPQED-LRGSVAYKRYIAGVLVADLYADCQQA 254 (258)
T ss_pred ----CCCCHHHHHHHHH---hcCCCCcc-CCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999887644 66665544 48999999999999999999997763
|
|
| >TIGR03312 Se_sel_red_FAD probable selenate reductase, FAD-binding subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-46 Score=418.11 Aligned_cols=249 Identities=19% Similarity=0.318 Sum_probs=219.0
Q ss_pred eEEecCCHHHHHHHHhhCC-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHHH
Q 000657 272 KWYRPLKLQHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFR 350 (1370)
Q Consensus 272 ~~~~P~sl~e~l~ll~~~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l~ 350 (1370)
+|++|+|++|++++|++++ +++++||||||.+.++ ...++++|||++| ||+.|+.++++|+|||+||+++|+++
T Consensus 3 ~y~~P~sl~Ea~~ll~~~~~~a~~lAGGTdL~~~~~--~~~~~~lIdl~~i-eL~~I~~~~~~l~IGA~~t~~~l~~~-- 77 (257)
T TIGR03312 3 QFFRPESTIQALELKKRHTGVAVWFAGGSKLNATPT--RTDKKVAISLDKL-ALDKIELQGGALHIGAMCHLQSLIDN-- 77 (257)
T ss_pred ceECCCCHHHHHHHHHhCCCCCEEEecCcchhhhhc--ccCCCEEEEcCCC-CCCcEEecCCEEEEEeCCcHHHHHhC--
Confidence 6999999999999999996 6999999999987654 4467899999999 99999999999999999999999876
Q ss_pred HhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhccc
Q 000657 351 KVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGY 430 (1370)
Q Consensus 351 ~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~g~ 430 (1370)
..++ ..|.+++.++|++||||+||+|||||+++|.||++|+|+||||+++|.+. |++|++|||.|+
T Consensus 78 ~~~~----------~~L~~aa~~va~~qIRN~gTlGGNl~~a~p~~D~~~~LlaldA~v~l~~~----r~vp~~dF~~g~ 143 (257)
T TIGR03312 78 ELTP----------AALKEALGFVYSRHIRNQATIGGEIAAFQSESLLLPVLLALKATVVLANA----SQMDIEDYLASE 143 (257)
T ss_pred cchH----------HHHHHHHHHhCCHHHhccccHHHHhhcCCCchHHHHHHHHcCCEEEEecC----cEEeHHHhcCCC
Confidence 1111 26999999999999999999999999999999999999999999999865 799999999985
Q ss_pred ccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHHHH
Q 000657 431 RKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKT 510 (1370)
Q Consensus 431 ~~~~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~E~ 510 (1370)
++|||++|+||.+. ..+.++|+ .|+..|||+||+|+.+++++ ++||+|||++|+|+|++++|+
T Consensus 144 ------~~Ell~~V~iP~~~--~~~~~~k~-~R~~~~~a~v~~A~~~~~~~--------~~ria~ggv~~~p~r~~~~E~ 206 (257)
T TIGR03312 144 ------QRELIVEVIIPNPN--LMCATRNI-SRSAAGLAVVTAAVAVDQKG--------NMRIALDGVSPVPVRLRDVEA 206 (257)
T ss_pred ------CCcEEEEEEcCCCC--CCceEEEe-cCcccchhhheeEEEEEecC--------CEEEEEEccCCceeehHHHhh
Confidence 69999999999763 35677889 78899999999999998752 389999999999999999999
Q ss_pred HhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhhHHHhhHHHHHHHHHHHhh
Q 000657 511 FIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSH 564 (1370)
Q Consensus 511 ~L~Gk~~~~~~l~~a~~~l~~e~~~~~~~~~~s~~YR~~la~~L~~k~l~~~~~ 564 (1370)
. .++++.++++ +.+++.|. ++.++|++||++|+++|++|++.++.+
T Consensus 207 ~----~~~~~~~~~~---~~~~~~p~-~D~r~sa~YRr~~~~~l~~r~l~~~~~ 252 (257)
T TIGR03312 207 Q----DLKGEALEQA---VADAIHPV-ADLCGSVAYKRYIAGVVVADLLAECQQ 252 (257)
T ss_pred C----cCCHHHHHHH---HHhcCCCC-CCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5 6777877654 55666644 446899999999999999999999876
|
This protein is suggested by Bebien, et al., to be the FAD-binding subunit of a molydbopterin-containing selenate reductase. Our comparative genomics suggests it to be a subunit of a selenium-dependent molybdenum hydroxylase for an unknown substrate. |
| >PF00941 FAD_binding_5: FAD binding domain in molybdopterin dehydrogenase; InterPro: IPR002346 Oxidoreductases, that also bind molybdopterin, have essentially no similarity outside this common domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=344.06 Aligned_cols=170 Identities=40% Similarity=0.666 Sum_probs=151.1
Q ss_pred CceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHH
Q 000657 270 GLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 349 (1370)
Q Consensus 270 ~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l 349 (1370)
+++|++|+|++||+++++.++++++|||||+++++++.+...|+.+|||++|+||+.|+.++++|+|||+||+++++++
T Consensus 2 ~~~~~~P~sl~ea~~ll~~~~~a~~vaGgT~l~~~~~~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vtl~~l~~~- 80 (171)
T PF00941_consen 2 PFEYFRPKSLEEALELLAKGPDARIVAGGTDLGVQMREGILSPDVLIDLSRIPELNGISEDDGGLRIGAAVTLSELEES- 80 (171)
T ss_dssp S-EEEE-SSHHHHHHHHHHGTTEEEESS-TTHHHHHHTTS---SEEEEGTTSGGGG-EEEETSEEEEETTSBHHHHHHH-
T ss_pred CeEEEccCCHHHHHHHHhcCCCCEEEeCCCccchhcccCccccceEEEeEEecccccEEEeccEEEECCCccHHHHhhc-
Confidence 5899999999999999999999999999999999999998899999999999999999999999999999999999998
Q ss_pred HHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehhHhhcc
Q 000657 350 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLG 429 (1370)
Q Consensus 350 ~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~R~vpl~dF~~g 429 (1370)
+.+. +.|+.|+++++++||+||||+||||||||+++|.||++|+|+||||+|+|.+.+| +|++|++|||+|
T Consensus 81 -~~~~-------~~~p~L~~~~~~ias~~IRn~aTiGGNl~~~~~~sD~~~~Llal~A~v~i~~~~g-~r~~~~~~f~~g 151 (171)
T PF00941_consen 81 -PLIQ-------QYFPALAQAARRIASPQIRNRATIGGNLCNASPASDLAPALLALDARVEIASPDG-TRTVPLEDFFTG 151 (171)
T ss_dssp -HHHH-------HHHHHHHHHHCTSS-HHHHTT-BHHHHHHHTBTT-SHHHHHHHTT-EEEEEETTE-EEEEEGGGGEEC
T ss_pred -chhh-------hhHHHHHHHHHHhCCHhHeeeeeeccccccCcccccHHHHHHHhCcEEEEEcCCe-eEEEEHHHhcCc
Confidence 3333 4789999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccccCCCCeEEEEEEccCC
Q 000657 430 YRKVDLTSGEILLSIFLPWT 449 (1370)
Q Consensus 430 ~~~~~L~~~Eil~~I~iP~~ 449 (1370)
+++++|++||||++|+||.+
T Consensus 152 ~~~~~l~~~eli~~I~iP~~ 171 (171)
T PF00941_consen 152 PRKTDLEPGELITSIRIPKP 171 (171)
T ss_dssp TTEESS-TTEEEEEEEEES-
T ss_pred cccccCCCCcEEEEEECCCC
Confidence 99999999999999999974
|
They include aldehyde oxidase (1.2.3.1 from EC), that converts an aldehyde and water to an acid and hydrogen peroxide, and xanthine dehydrogenase (1.1.1.204 from EC), that converts xanthine to urate. These enzymes require molybdopterin and FAD as cofactors and have and two 2FE-2S clusters. Another enzyme that contains this domain is the Pseudomonas thermocarboxydovorans carbon monoxide oxygenase.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2E1Q_C 2CKJ_A 3EUB_K 3NS1_K 3NVV_B 1FO4_B 3AM9_A 3AX7_B 3BDJ_A 3ETR_B .... |
| >PF01799 Fer2_2: [2Fe-2S] binding domain; InterPro: IPR002888 The [2Fe-2S] binding domain is found in a range of enzymes including dehydrogenases, oxidases and oxidoreductases | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-31 Score=235.65 Aligned_cols=75 Identities=61% Similarity=1.136 Sum_probs=64.5
Q ss_pred EeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHHHHcCCCCCCHHHHHHHhcCcccccCCChhHHHHHHH
Q 000657 101 TVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV 177 (1370)
Q Consensus 101 TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~ 177 (1370)
|||||+ +++.+||||+||+++|++|||||||||||++++||++++.| +++||+++|+|||||||||++|++|++.
T Consensus 1 TvEGl~-~~~~~~~iq~af~~~~a~QCGfCtpG~im~~~~ll~~~~~p-~~~ei~~al~gnlCRCTgY~~I~~Av~~ 75 (75)
T PF01799_consen 1 TVEGLA-SDGELHPIQQAFVEHGAVQCGFCTPGMIMAAYALLRRNPDP-TEEEIREALSGNLCRCTGYRPIVEAVRQ 75 (75)
T ss_dssp -GGGSS-BTTB--HHHHHHHHTT--SSSSSHHHHHHHHHHHHHHSSS--CHHHHHHHTTTS--SSSTSHHHHHHHH-
T ss_pred CcCcCC-CCCCcCHHHHHHHHhCCCcCCcchHHHHHHHHHHhhcccch-hhHHHHHHHHcCccCCCCcHHHHHHHhC
Confidence 899998 68899999999999999999999999999999999999999 9999999999999999999999999973
|
The aldehyde oxido-reductase (Mop) from the sulphate reducing anaerobic Gram-negative bacterium Desulfovibrio gigas is a homodimer of 907 amino acid residues subunits and is a member of the xanthine oxidase family. The protein contains a molybdopterin cofactor (Mo-co) and two different [2Fe-2S] centres. It is folded into four domains of which the first two bind the iron sulphur centres and the last two are involved in Mo-co binding. Mo-co is a molybdenum molybdopterin cytosine dinucleotide. Molybdopterin forms a tricyclic system with the pterin bicycle annealed to a pyran ring. The molybdopterin dinucleotide is deeply buried in the protein. The cis-dithiolene group of the pyran ring binds the molybdenum, which is coordinated by three more (oxygen) ligands [].; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 2E3T_A 1WYG_A 3AN1_B 2E1Q_C 2CKJ_A 3B9J_I 3NVY_J 1FO4_B 3NRZ_J 3AM9_A .... |
| >PF01315 Ald_Xan_dh_C: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; InterPro: IPR000674 Aldehyde oxidase (1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=241.00 Aligned_cols=107 Identities=50% Similarity=0.674 Sum_probs=92.0
Q ss_pred cceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCCCCC--CCcc--ccccccCeEE
Q 000657 621 TGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGP--VVAD--EELFASEVVT 696 (1370)
Q Consensus 621 tG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~g~--~~~d--~~~la~~~V~ 696 (1370)
||+++|++|+++ |||||+++||||++||+|++||+++|+++|||++|+|++|+|+.+..+. ...+ +|+|++++|+
T Consensus 1 TG~a~Y~~Di~~-~~~l~~~~vrS~~a~a~I~sid~~~A~~~pGV~~v~t~~Dip~~~~~~~~~~~~~~~~~~la~~~V~ 79 (111)
T PF01315_consen 1 TGEARYVDDIPP-PGMLYAAFVRSPIAHARIKSIDTSEALAMPGVVAVITAEDIPGINPNGGLPIPHDEPQPVLADDKVR 79 (111)
T ss_dssp TT-S-BGGGSCS-TTTEEEEEEE-SSSSEEEEEEEGHHHHHSTTEEEEEEGGGHSSGSEESCSCSTTSSEEESS-SSEES
T ss_pred CcCeEcccccCC-CCCeEEEEEecCcCcEEEEEEecHHHccCCCEEEEEEecccCccccCccccccCCCceEeccCCeEe
Confidence 899999999998 7999999999999999999999999999999999999999998775543 3334 4799999999
Q ss_pred ecCCeEEEEEeCCHHHHHHhcccceeEEeecC
Q 000657 697 CVGQVIGVVVAETHEEAKLASRKVQVEYEELP 728 (1370)
Q Consensus 697 y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp 728 (1370)
|+|||||+|||+|+++|++|+++|+|+||+||
T Consensus 80 y~GqpVa~VvAet~~~A~~Aa~~V~V~Ye~lp 111 (111)
T PF01315_consen 80 YVGQPVALVVAETREAARDAAELVKVEYEELP 111 (111)
T ss_dssp STT-EEEEEEESSHHHHHHHHHT-EEEEEE--
T ss_pred ECCCeEEEEEECCHHHHHHHhcCcEEEeEeCC
Confidence 99999999999999999999999999999987
|
2.3.1 from EC) catalyses the conversion of an aldehyde in the presence of oxygen and water to an acid and hydrogen peroxide. The enzyme is a homodimer, and requires FAD, molybdenum and two 2FE-2S clusters as cofactors. Xanthine dehydrogenase (1.1.1.204 from EC) catalyses the hydrogenation of xanthine to urate, and also requires FAD, molybdenum and two 2FE-2S clusters as cofactors. This activity is often found in a bifunctional enzyme with xanthine oxidase (1.1.3.22 from EC) activity too. The enzyme can be converted from the dehydrogenase form to the oxidase form irreversibly by proteolysis or reversibly through oxidation of sulphydryl groups.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1N63_E 1N60_B 1ZXI_E 1N5W_E 1N62_B 1N61_E 3AN1_B 2E3T_A 1WYG_A 2W3R_D .... |
| >PF03450 CO_deh_flav_C: CO dehydrogenase flavoprotein C-terminal domain; InterPro: IPR005107 Proteins containing this domain form structural complexes with other known families, such as IPR008274 from INTERPRO and IPR001041 from INTERPRO] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-17 Score=161.60 Aligned_cols=102 Identities=26% Similarity=0.432 Sum_probs=95.8
Q ss_pred eeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccC
Q 000657 457 EFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILK 536 (1370)
Q Consensus 457 ~~K~~~R~~~d~a~Vn~A~~~~~~~~~~~~~i~~~rIa~Ggva~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~~~ 536 (1370)
+||+++|+.+|||++|+|+.+.+++++ +|+++||++||++++|+|++++|++|.|++|++++++++.+.+.+++.+.
T Consensus 2 ayk~~~R~~~d~a~v~~a~~~~~~~~~---~i~~~ria~g~v~~~p~r~~~~E~~L~g~~~~~~~~~~~~~~~~~~~~~~ 78 (103)
T PF03450_consen 2 AYKIGRRKANDIAIVNVAVLVSVDDDG---RIEDARIAVGGVAPTPVRAEEVEAALIGKPLSEETLEEAAEAVSEEIDPI 78 (103)
T ss_dssp EEEESSSSSSSSSSEEEEEEEEEETTS---EEEEEEEEEESSSSSTEE-HHHHHHTTTSBSSHHHHHHHHHHHHHHTHHC
T ss_pred CeeccCccccHHHHHhhhheEEEecCc---eEEEEEEEEeccccceeehHHHHHHHhhcchhhhhHHHHHHHHHhcCCCC
Confidence 569999999999999999999999887 99999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCChhhHHHhhHHHHHHHHHHH
Q 000657 537 EDAPGGMVDFRKSLTLSFFFKFFLWV 562 (1370)
Q Consensus 537 ~~~~~~s~~YR~~la~~L~~k~l~~~ 562 (1370)
++ .++|++||++|+.+|++|+|.++
T Consensus 79 ~d-~r~s~~YR~~l~~~l~~ral~~~ 103 (103)
T PF03450_consen 79 SD-MRASAEYRRHLARVLVRRALEEV 103 (103)
T ss_dssp TT-TTBTHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CCCCHHHHHHHHHHHHHHHHHhC
Confidence 66 68999999999999999999874
|
The carbon monoxide (CO) dehydrogenase of Oligotropha carboxidovorans is a heterotrimeric complex composed of a apoflavoprotein, a molybdoprotein, and an iron-sulphur protein. It can be dissociated with sodium dodecylsulphate []. CO dehydrogenase catalyzes the oxidation of CO according to the following equation []: |
| >COG1529 CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.9e-15 Score=191.06 Aligned_cols=474 Identities=15% Similarity=0.078 Sum_probs=289.0
Q ss_pred cCCCCccC-CcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCceEeeecchhccCCCCEEEEEecCCCCCCCC
Q 000657 601 TKHGTSVG-SPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR 679 (1370)
Q Consensus 601 ~~~~~~iG-~~~~r~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~ 679 (1370)
+..+.++| ...++ |+. ++|+.+.|..|..+ ++||+..+.+++..-..|.. |...+...++++.+.-.
T Consensus 179 ~~~~E~~g~~a~~~-d~~-~lt~~~~tQ~~~~~-~~~l~~~l~~p~~~vrvi~~-dvGggfG~K~~~~~~~~-------- 246 (731)
T COG1529 179 PNPMEPHGVVAVPD-DGD-KLTVWASTQIPHRL-RGMLAAVLGIPPSKVRVISP-DVGGGFGSKGVVYVEEI-------- 246 (731)
T ss_pred ccCcccccceeeEc-CCC-eEEEEEccCCchHH-HHHHHHHhCCCHHHeEEecC-CCCcccCCcccceeHHH--------
Confidence 35677888 67888 777 99999999999998 79999999955555444544 88877777776443322
Q ss_pred CCCCCccccccccCeEEecCCeEEEEEeCCHHHHHHhcccceeEEeecCc-CCCHHHHH-hccCCCCC-CccccccCC--
Q 000657 680 IGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPA-ILSIQEAI-DAKSFHPN-TERCFRKGD-- 754 (1370)
Q Consensus 680 ~g~~~~d~~~la~~~V~y~Gq~Va~VvAet~~~A~~Aa~~V~V~ye~lp~-v~~~~~A~-~~~a~~~~-~~~~~~~Gd-- 754 (1370)
.+-. +++++..++.+....+...+.....+. ..+..-+. +++.+... .......|+
T Consensus 247 ----------~~~~---------aa~~~grpVk~~~tR~e~~~~~~~~~~~~~~~~~~a~~dg~l~~~~~~~~~~~Gay~ 307 (731)
T COG1529 247 ----------LAAL---------AAVVAGRPVKWIETREELFVATGHRRATLIDVKLGADKDGRLLAIKGTVAADTGAYN 307 (731)
T ss_pred ----------HHHH---------HHHhcCCCeEEecchHHhhhccCCCCCceEEeeeecCcCCcEEeeeeeEEecCCCcc
Confidence 1101 122222222222222222222111111 11111111 11111000 011122333
Q ss_pred ---cccccc-cCCCccEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCCcEEEEec
Q 000657 755 ---VDICFQ-SGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTK 830 (1370)
Q Consensus 755 ---v~~af~-~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kVrV~~~ 830 (1370)
+...+. .....+.++..|..++..|..||| ++..... ++. ..||.+...+..+|+.|||++.+||++..
T Consensus 308 ~~~~~~~~~~~~~g~Y~i~~~~~~~~~v~tn~~p-~~~~Rg~--g~~----~~~~a~E~~~d~lA~~Lgidp~eiR~~n~ 380 (731)
T COG1529 308 GPTVPAAAAGLARGPYKIEAVYIEPYLVHTNMPP-NGAYRGA--GRP----EGTFALERAVDELAEELGIDPVEIRLRNL 380 (731)
T ss_pred ccchhHHHHHhcCCceecccceeeeEEEEcCCCC-CcccccC--CCc----hhHHHHHHHHHHHHHHhCCCHHHHhhhhc
Confidence 222220 023446899999999999999999 6666543 222 89999999999999999999999999999
Q ss_pred ccCCCCC-CCCccchHHHHHHHHHHHcCC---CCEEEEeChHHHHhhcCCCccEEEE--------EEEeeCCCCcEEEEE
Q 000657 831 RIGGGFG-GKETRSAFIAAAAAVPSFLLN---RPVNLTLDRDIDMMISGQRHSFLGK--------YKVGFTNEGKVLALD 898 (1370)
Q Consensus 831 ~vGGgFG-gK~~~~~~~~~~aAlaA~~~g---RPVkl~~sR~E~~~~~~~R~~~~~~--------~k~g~~~dG~i~a~~ 898 (1370)
.-+|+|| ++...+.++...+..++++++ ||+|..|+|++++.....+.-.... .++-++.||+++...
T Consensus 381 ~~~g~~~~~~~~~~~~~~~~~~~~ak~~~~~~~~~k~~~~re~~~~~G~g~a~~~~~~~~~~~~~a~v~~~~~g~v~v~~ 460 (731)
T COG1529 381 IRGGPFGLGRRYDSGDYLEELDEAAKRFGWSERPVKPIWTREGDLRRGVGRAMYTEPSGAGPGEGARVRLEADGTVTVRT 460 (731)
T ss_pred cccCCCCCcccccCccHHHHHHHHHHhcCcccccCChhhhhcCCeeeeeEEEEEEEeccCCCCCcEEEEEcCCCcEEEEE
Confidence 9999999 554444556667778888887 9999999999998876555554333 334445567766554
Q ss_pred EEEEecCCCCCCchHHHHHHHhhccCCCcccCeEEEEEEEEeCCCCCCCccCCCChhhhHHHHHHHHHHHHHHhCCCHHH
Q 000657 899 LEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEE 978 (1370)
Q Consensus 899 ~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~p~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e 978 (1370)
... +.| .+.-........-.|.||+-+++.....|..++ .+||.+|+..+.|+.|.+++++++..+.||..
T Consensus 461 g~~--~~G------~G~~t~~~q~~ae~lgip~~~V~v~~gDt~~~~-~~~~s~GS~~~~~~~~A~~~a~~~l~~k~~~~ 531 (731)
T COG1529 461 GAT--DIG------QGTDTVLAQIAAEELGIPPDDVEVVHGDTDVPV-GGWGSVGSRGTAVAGSAVIDAAAKLAEKDPVA 531 (731)
T ss_pred CCc--cCC------CcHHHHHHHHHHHHhCCCHHHEEEEecCCCCCC-CCCCCcCcccccchHHHHHHHHHHHHHHHHHH
Confidence 332 112 111111122235679999999988888998775 78999999999999999999999999999999
Q ss_pred HHHHhcCCCCCccccCccccCCCHHHHHHHHHHhcCChhhhHhhhhcccCCCcceeeeEEEeeeeccccccccCCceeEE
Q 000657 979 IREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGAL 1058 (1370)
Q Consensus 979 ~Rl~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~ 1058 (1370)
+|+..-....+ -.|+.......|..+..........++-+.+|+++... |+... .......-++
T Consensus 532 aa~~l~~~~~~--------------~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~-~~~~~A~~~E 595 (731)
T COG1529 532 AARMLGADAED--------------VVLEDGAFKVGGGDRRSAVSLKEVAGKGLAPGLAVAAS-FGSDN-TYPYGAHIAE 595 (731)
T ss_pred HHhhhCCChhH--------------eeeccCeeeeccCCccceeeHHHhhhccccCccccccc-ccccc-cccceeEEEE
Confidence 99876221111 13444444455543211000000001113456665422 22110 0001234588
Q ss_pred EEEe-cCCcEEEE--EcCccCCcchHH-------------HHHHHHHHHh----------------------CCCcccEE
Q 000657 1059 VHVY-TDGTVLVT--HGGVEMGQGLHT-------------KVAQVAASAF----------------------NIPLSSVF 1100 (1370)
Q Consensus 1059 V~l~-~DGsV~V~--~g~~e~GqG~~T-------------~~~qiaAe~L----------------------gip~~~V~ 1100 (1370)
|+++ .+|+|.|. ....|.|.=++= .+.|..-|+. .+|.-.|+
T Consensus 596 V~Vd~~tG~vrV~r~~~~~D~G~vvNP~~~~~Qv~GGi~~Gig~aL~E~~i~d~~g~~~~~n~~dY~ip~~~d~P~iev~ 675 (731)
T COG1529 596 VEVDPETGEVRVLRVVAVDDCGRVVNPKLAEGQVEGGILMGIGMALYEEAIYDEDGQLLNSNLADYGIPRAADAPEVEVE 675 (731)
T ss_pred EEEECCCCcEEEEEEEEEEecCCccCHHHHHHHHHhHHHHHHHHHhhccceECCCCCcCCCCcccccCCCcccCCceEEE
Confidence 9999 59988885 566676643221 1222233311 35665666
Q ss_pred EecCCCCCCCCCCCCccchhhhhHHHHHHHHHHHHHH
Q 000657 1101 VSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKA 1137 (1370)
Q Consensus 1101 v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~ 1137 (1370)
+.+......|.+....|=-++.-...|+.+|-..+-.
T Consensus 676 ~v~~p~~~~p~g~kGvGE~g~~~~~pAvaNAV~~AtG 712 (731)
T COG1529 676 FVESPSPFGPLGAKGVGEGGIIGIAPAIANAVFDATG 712 (731)
T ss_pred EecCCCCCCCCCCCCcCcCccCchhHHHHHHHHHHhC
Confidence 6664433356666666677777788888888877643
|
|
| >PRK12386 fumarate reductase iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=7.7e-10 Score=124.01 Aligned_cols=69 Identities=13% Similarity=0.326 Sum_probs=63.1
Q ss_pred EEEEeccCCCCCcHHHHHhhCCC-----CccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEe
Q 000657 28 LRKVLPDGLAHLTLLEYLRDIGL-----TGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~~~l-----~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 102 (1370)
+.++++ +++++|||++||+.+. +++|.||.+|.||+|+|+||| +++.||.+++.+++|.+++||
T Consensus 20 q~y~v~-~~~~~tvLd~L~~i~~~~d~~l~~r~~C~~g~CGsCa~~InG----------~p~laC~t~~~~~~~~~~iti 88 (251)
T PRK12386 20 QDYTVE-VNEGEVVLDVIHRLQATQAPDLAVRWNCKAGKCGSCSAEING----------RPRLMCMTRMSTFDEDETVTV 88 (251)
T ss_pred EEEEEe-CCCCCCHHHHHHHhccccCCCCcccCCCCCCcCCCCEEEECc----------cEeccHHhHHHHhCCCCeEEE
Confidence 567776 8899999999998766 599999999999999999996 899999999999999999999
Q ss_pred ccccC
Q 000657 103 EGVGN 107 (1370)
Q Consensus 103 Egl~~ 107 (1370)
|+|.+
T Consensus 89 epl~~ 93 (251)
T PRK12386 89 TPMRT 93 (251)
T ss_pred ccCCC
Confidence 99973
|
|
| >PRK05950 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.1e-07 Score=104.39 Aligned_cols=68 Identities=19% Similarity=0.238 Sum_probs=59.0
Q ss_pred EEEEeccCC-CCCcHHHHHhhC-----CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEE
Q 000657 28 LRKVLPDGL-AHLTLLEYLRDI-----GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVIT 101 (1370)
Q Consensus 28 ~~~~~~~~~-~~~~L~~~LR~~-----~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 101 (1370)
+.++++ ++ +++|||++||+. ...+.+.||++|.||+|+|.||| +++.||.+++..+ |.+++|
T Consensus 18 ~~~~v~-~~~~~~tvl~~L~~~~~~~~~~l~~~~~c~~g~Cg~C~v~vnG----------~~~laC~t~~~~~-~~~~~t 85 (232)
T PRK05950 18 QTYEVD-VDECGPMVLDALIKIKNEIDPTLTFRRSCREGVCGSDAMNING----------KNGLACITPISDL-KKGKIV 85 (232)
T ss_pred EEEEeC-CCCCCCHHHHHHHHhCCccCCcceeeCCCCCCCCCCCEEEECC----------cCccchhChHhHc-CCCeEE
Confidence 355665 77 999999999974 46889999999999999999996 6788999999999 668899
Q ss_pred eccccC
Q 000657 102 VEGVGN 107 (1370)
Q Consensus 102 vEgl~~ 107 (1370)
||+|.+
T Consensus 86 iepl~~ 91 (232)
T PRK05950 86 IRPLPG 91 (232)
T ss_pred EEECCC
Confidence 999974
|
|
| >TIGR00384 dhsB succinate dehydrogenase and fumarate reductase iron-sulfur protein | Back alignment and domain information |
|---|
Probab=98.24 E-value=8.6e-07 Score=98.76 Aligned_cols=68 Identities=28% Similarity=0.444 Sum_probs=59.2
Q ss_pred EEEEeccCCCCCcHHHHHhhC-----CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEe
Q 000657 28 LRKVLPDGLAHLTLLEYLRDI-----GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~~-----~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 102 (1370)
+.++++ +++++|||+.|++. ...+.+.+|..|.||+|+|.||| +++.||.+++..+ |++++||
T Consensus 15 ~~~~v~-~~~~~tvl~~l~~i~~~~~~~l~~~~~C~~g~Cg~C~v~vnG----------~~~laC~t~v~~~-g~~~~~i 82 (220)
T TIGR00384 15 QSYEVP-ADEGMTVLDALNYIKDEQDPSLAFRRSCRNGICGSCAMNVNG----------KPVLACKTKVEDL-GQPVMKI 82 (220)
T ss_pred EEEEEe-CCCCCcHHHHHHHHHHhcCCCceeecccCCCCCCCCeeEECC----------EEhhhhhChHHHc-CCCcEEE
Confidence 456665 78999999999862 56778999999999999999996 6889999999998 9999999
Q ss_pred ccccC
Q 000657 103 EGVGN 107 (1370)
Q Consensus 103 Egl~~ 107 (1370)
|+|.+
T Consensus 83 epl~~ 87 (220)
T TIGR00384 83 EPLPN 87 (220)
T ss_pred eeCCC
Confidence 99973
|
Succinate dehydrogenase and fumarate reductase are reverse directions of the same enzymatic interconversion, succinate + FAD+ = fumarate + FADH2 (EC 1.3.11.1). In E. coli, the forward and reverse reactions are catalyzed by distinct complexes: fumarate reductase operates under anaerobic conditions and succinate dehydrogenase operates under aerobic conditions. This model also describes a region of the B subunit of a cytosolic archaeal fumarate reductase. |
| >PF13510 Fer2_4: 2Fe-2S iron-sulfur cluster binding domain; PDB: 1Y56_A 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A | Back alignment and domain information |
|---|
Probab=98.18 E-value=4e-06 Score=78.41 Aligned_cols=69 Identities=32% Similarity=0.438 Sum_probs=48.4
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCC-----cc----ccCCCCCCCCceEEEEccccccCCccccee-ecccc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLT-----GT----KLGCGEGGCGACTVMVSRYDKKSKKCVHCA-VNACL 88 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~-----g~----k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~-v~sCl 88 (1370)
..|+|+|||+++++. ++.||++.|+..|+. .- ..-|..|.|+.|.|.+++ .+ +.||.
T Consensus 2 ~~v~i~idG~~v~~~---~G~til~al~~~gi~ip~~c~~~~~r~~~~~~g~C~~C~Vev~g----------~~~v~AC~ 68 (82)
T PF13510_consen 2 KMVTITIDGKPVEVP---PGETILEALLAAGIDIPRLCYHGRPRGGLCPIGSCRLCLVEVDG----------EPNVRACS 68 (82)
T ss_dssp EEEEEEETTEEEEEE---ET-BHHHHHHHTT--B-EETTTS-EEBSSSSSTT-SS-EEEESS----------EEEEETTT
T ss_pred CEEEEEECCEEEEEc---CCCHHHHHHHHCCCeEEEeeeccCcccccCCccccceEEEEECC----------CcceEccc
Confidence 579999999999865 899999999975333 22 233778999999999985 33 89999
Q ss_pred cchhccCCcEEEEe
Q 000657 89 APLYSLEGMHVITV 102 (1370)
Q Consensus 89 ~~~~~~~g~~i~Tv 102 (1370)
+++. +|+.|.|-
T Consensus 69 t~v~--~GM~V~T~ 80 (82)
T PF13510_consen 69 TPVE--DGMVVETQ 80 (82)
T ss_dssp -B----TTEEEE--
T ss_pred CCCc--CCcEEEEe
Confidence 9974 79999873
|
|
| >PRK12576 succinate dehydrogenase iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.2e-06 Score=98.42 Aligned_cols=69 Identities=20% Similarity=0.256 Sum_probs=58.0
Q ss_pred EEEEeccCCCCCcHHHHHhhC--CC---CccccCCCCCCCCceEEEEccccccCCcccceeecccccchhcc--CCcEEE
Q 000657 28 LRKVLPDGLAHLTLLEYLRDI--GL---TGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL--EGMHVI 100 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~~--~l---~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~--~g~~i~ 100 (1370)
+.+.++ +++++|||++|+.. .+ -+.+.+|.+|.||+|+|.||| +++.||.+++..+ ++.+++
T Consensus 25 ~~~~v~-~~~~~tvLd~L~~i~~~~d~tl~~~~~C~~G~CgsC~v~ING----------~~~laC~t~v~~~~~~~~~~~ 93 (279)
T PRK12576 25 QEYKVK-VDRFTQVTEALRRIKEEQDPTLSYRASCHMAVCGSCGMKING----------EPRLACKTLVLDVAKKYNSVI 93 (279)
T ss_pred EEEEEe-cCCCCHHHHHHHHhCCccCCCceecCCCCCCCCCCCEEEECC----------cEeccccCcHHHhhcCCCCcE
Confidence 456665 88999999999972 22 256999999999999999996 6789999999998 366789
Q ss_pred EeccccC
Q 000657 101 TVEGVGN 107 (1370)
Q Consensus 101 TvEgl~~ 107 (1370)
|||+|.+
T Consensus 94 tiePl~~ 100 (279)
T PRK12576 94 TIEPMDY 100 (279)
T ss_pred EEEECCC
Confidence 9999974
|
|
| >PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.5e-05 Score=100.78 Aligned_cols=93 Identities=27% Similarity=0.414 Sum_probs=69.2
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCC------CCCCCCceEEEEccccccCCcccceeecccccchh
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGC------GEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLY 92 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC------~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 92 (1370)
+.|+|+|||+++++ .+++||++.|+..|+.-.+ .| ..|.|+.|.|.+++.. +.+.||.+++
T Consensus 2 ~~v~~~idg~~~~~---~~g~ti~~a~~~~g~~ip~-~c~~~~~~~~g~C~~C~V~v~g~~--------~~~~aC~t~~- 68 (652)
T PRK12814 2 NTISLTINGRSVTA---APGTSILEAAASAGITIPT-LCFHQELEATGSCWMCIVEIKGKN--------RFVPACSTAV- 68 (652)
T ss_pred CeEEEEECCEEEEe---CCcCcHHHHHHHcCCcccc-ccCCCCCCCccccceeEEEECCCc--------ceecCcCCCC-
Confidence 36899999998875 4899999999987655333 44 4799999999998621 4689999998
Q ss_pred ccCCcEEEEeccccCCCCCCCHHHHHHHHcCCCC-CCCCC
Q 000657 93 SLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQ-CGFCT 131 (1370)
Q Consensus 93 ~~~g~~i~TvEgl~~~~~~~~~iq~a~~~~~~~q-CG~Ct 131 (1370)
.+|+.|.| . ...+..+|+...+.-.++ |++|.
T Consensus 69 -~~Gm~v~t----~--~~~~~~~r~~~le~l~~~~c~~C~ 101 (652)
T PRK12814 69 -SEGMVIET----E--NAELHAMRRQSLERLIEQHCGDCL 101 (652)
T ss_pred -CCCCEEEe----C--cHHHHHHHHHHHHHHHhhcccccC
Confidence 48999999 2 345666775444443333 78875
|
|
| >cd00207 fer2 2Fe-2S iron-sulfur cluster binding domain | Back alignment and domain information |
|---|
Probab=97.90 E-value=1.7e-05 Score=74.30 Aligned_cols=69 Identities=25% Similarity=0.384 Sum_probs=52.1
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEcccccc--------CCcccceeecccccch
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKK--------SKKCVHCAVNACLAPL 91 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~~~~~--------~~~~~~~~v~sCl~~~ 91 (1370)
++|+.||+...++ ++++++|+++|++.|+. ...+|+.|.||+|.|.|..-+.. ........+.+|.+.+
T Consensus 1 v~~~~~~~~~~~~-~~~g~~ll~al~~~g~~-~~~~C~~g~Cg~C~v~v~~G~~~~~~~~~~~~~~~~~~~~LaC~~~~ 77 (84)
T cd00207 1 VTINVPGSGVEVE-VPEGETLLDAAREAGID-IPYSCRAGACGTCKVEVVEGEVDQSDPSLLDEEEAEGGYVLACQTRV 77 (84)
T ss_pred CEEecCCCCEEEE-ECCCCcHHHHHHHcCCC-cccCCCCcCCcCCEEEEeeCccccCcccCCCHHHHhCCeEEEEeCee
Confidence 4688887777776 88999999999998877 89999999999999999641111 0011234678888876
|
Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin. |
| >PRK08493 NADH dehydrogenase subunit G; Validated | Back alignment and domain information |
|---|
Probab=97.90 E-value=1.6e-05 Score=102.84 Aligned_cols=95 Identities=22% Similarity=0.367 Sum_probs=76.9
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhCCCCccc----cCCC-CCCCCceEEEEccccccCCcccceeecccccchhccC
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTK----LGCG-EGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLE 95 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k----~gC~-~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~ 95 (1370)
|+|+|||+++++. +++|+|+.+|..|+.-.. .+|. .|.|+.|.|.|++ +++.||.+|+. +
T Consensus 2 v~i~IdG~~v~~~---~G~til~aa~~~gi~iP~lC~~~~~~~~G~Cr~C~VeV~G----------~~~~AC~t~v~--d 66 (819)
T PRK08493 2 ITITINGKECEAQ---EGEYILNVARRNGIFIPAICYLSGCSPTLACRLCMVEADG----------KRVYSCNTKAK--E 66 (819)
T ss_pred eEEEECCEEEEeC---CCCHHHHHHHHcCCccccccccCCCCCCccccceEEEECC----------EEeccccCCCC--C
Confidence 7899999998754 899999999987766543 4676 5999999999986 45899999994 9
Q ss_pred CcEEEEec-cccCCCCCCCHHHHHHHHcCCCCCCCCChH
Q 000657 96 GMHVITVE-GVGNRKHGLHPIQESLVRSHGSQCGFCTPG 133 (1370)
Q Consensus 96 g~~i~TvE-gl~~~~~~~~~iq~a~~~~~~~qCG~CtpG 133 (1370)
|+.|.|-. -+ ...-+.+++.+...|-.+|+.|..+
T Consensus 67 GM~V~T~s~~v---~~~Rk~vle~ll~~HpldC~~Cd~~ 102 (819)
T PRK08493 67 GMNILTNTPNL---MDERNAIMQTYDVNHPLECGVCDKS 102 (819)
T ss_pred CCEEEecCHHH---HHHHHHHHHHHHhccCCCCCcCCCC
Confidence 99999842 22 1234678899999999999999864
|
|
| >PF13085 Fer2_3: 2Fe-2S iron-sulfur cluster binding domain; PDB: 3P4Q_N 1KFY_N 3CIR_N 3P4R_B 2B76_N 1KF6_B 3P4P_N 3P4S_B 1L0V_B 1ZOY_B | Back alignment and domain information |
|---|
Probab=97.86 E-value=3.6e-05 Score=75.59 Aligned_cols=67 Identities=24% Similarity=0.360 Sum_probs=53.1
Q ss_pred EEEeccCCCCCcHHHHHhh----C-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcE--EEE
Q 000657 29 RKVLPDGLAHLTLLEYLRD----I-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMH--VIT 101 (1370)
Q Consensus 29 ~~~~~~~~~~~~L~~~LR~----~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~--i~T 101 (1370)
.++++ +++++|+|+.|.. + +=-..+.+|.+|.||+|.|.||| +++.+|.+++..+.... .+|
T Consensus 20 ~y~v~-~~~~~tVLd~L~~Ik~~~D~sLafr~sCr~giCGsCam~ING----------~~~LAC~t~v~~~~~~~~~~i~ 88 (110)
T PF13085_consen 20 EYEVP-VEPGMTVLDALNYIKEEQDPSLAFRYSCRSGICGSCAMRING----------RPRLACKTQVDDLIEKFGNVIT 88 (110)
T ss_dssp EEEEE-GGSTSBHHHHHHHHHHHT-TT--B--SSSSSSSSTTEEEETT----------EEEEGGGSBGGGCTTSETBEEE
T ss_pred EEEec-CCCCCcHHHHHHHHHhccCCCeEEEecCCCCCCCCCEEEECC----------ceecceeeEchhccCCCcceEE
Confidence 45665 7799999998873 2 44567899999999999999997 89999999999998763 788
Q ss_pred ecccc
Q 000657 102 VEGVG 106 (1370)
Q Consensus 102 vEgl~ 106 (1370)
||=|.
T Consensus 89 IePL~ 93 (110)
T PF13085_consen 89 IEPLP 93 (110)
T ss_dssp EEEST
T ss_pred EEECC
Confidence 99886
|
... |
| >PRK12385 fumarate reductase iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=9.8e-05 Score=83.43 Aligned_cols=66 Identities=24% Similarity=0.342 Sum_probs=52.8
Q ss_pred EEEEeccCCCCCcHHHHHhh---C-CCC-ccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEe
Q 000657 28 LRKVLPDGLAHLTLLEYLRD---I-GLT-GTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~---~-~l~-g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 102 (1370)
+.+.++ +++++|||+.|+. . ..+ +.+.+|..|.||+|+|.||| +++.+|.+++..+.+. +||
T Consensus 25 ~~~~v~-~~~~~tvl~~L~~ik~~~d~~l~fr~~C~~giCGsC~v~InG----------~~~laC~t~~~~~~~~--~~i 91 (244)
T PRK12385 25 QTYEVP-YDETTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNN----------VPKLACKTFLRDYTGG--MKV 91 (244)
T ss_pred EEEEee-CCCCCcHHHHHHHHHHhcCCCceeccCCCCCcCCCCcceECc----------cChhhHhhHHHHcCCC--eEE
Confidence 456665 7899999999954 2 334 67889999999999999996 6799999999987532 578
Q ss_pred cccc
Q 000657 103 EGVG 106 (1370)
Q Consensus 103 Egl~ 106 (1370)
|=|.
T Consensus 92 ePl~ 95 (244)
T PRK12385 92 EALA 95 (244)
T ss_pred eeCC
Confidence 7775
|
|
| >PRK07569 bidirectional hydrogenase complex protein HoxU; Validated | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00018 Score=81.15 Aligned_cols=96 Identities=27% Similarity=0.379 Sum_probs=71.7
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCC------CCCCCCceEEEEccccccCCcccceeecccccchh
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGC------GEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLY 92 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC------~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 92 (1370)
+.|+|+|||+.+++ .+++|||+.++..|+. ....| ..|.||.|.|.+++. .+.+.||.+++.
T Consensus 2 ~~v~i~idg~~~~~---~~g~til~a~~~~gi~-ip~~C~~~~~~~~G~C~~C~V~v~g~--------~~~~~aC~t~v~ 69 (234)
T PRK07569 2 SVKTLTIDDQLVSA---REGETLLEAAREAGIP-IPTLCHLDGLSDVGACRLCLVEIEGS--------NKLLPACVTPVA 69 (234)
T ss_pred ceEEEEECCEEEEe---CCCCHHHHHHHHcCCC-CCcCcCCCCCCCCCccCCcEEEECCC--------CccccCcCCCCC
Confidence 36899999999765 4899999999976544 22335 499999999999851 135789999976
Q ss_pred ccCCcEEEEeccccCCCCCC----CHHHHHHHHcCCCCCCCCChHH
Q 000657 93 SLEGMHVITVEGVGNRKHGL----HPIQESLVRSHGSQCGFCTPGF 134 (1370)
Q Consensus 93 ~~~g~~i~TvEgl~~~~~~~----~~iq~a~~~~~~~qCG~CtpG~ 134 (1370)
+|+.|.|- ..++ .-+.+.+...|-.-|.-|..+-
T Consensus 70 --~Gm~v~t~------~~~~~~~rk~~l~~ll~~h~~~C~~C~~~g 107 (234)
T PRK07569 70 --EGMVVQTN------TPRLQEYRRMIVELLFAEGNHVCAVCVANG 107 (234)
T ss_pred --CCCEEEEC------CHHHHHHHHHHHHHHHHhccccCcccCCCC
Confidence 89999983 2222 2356667788999999998653
|
|
| >PF00111 Fer2: 2Fe-2S iron-sulfur cluster binding domain; InterPro: IPR001041 The ferredoxin protein family are electron carrier proteins with an iron-sulphur cofactor that act in a wide variety of metabolic reactions | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0001 Score=68.11 Aligned_cols=47 Identities=36% Similarity=0.615 Sum_probs=42.0
Q ss_pred EEECCEEEEeccCCCCCc-HHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 23 LYVNGLRKVLPDGLAHLT-LLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 23 ~~~Ng~~~~~~~~~~~~~-L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
+++||+.++++ +.++.+ ||++|++.+-..+..+|+.|.||.|.|.|.
T Consensus 1 i~i~g~~~~~~-~~~~~~~ll~~~~~~~gi~i~~~C~~g~Cg~C~v~v~ 48 (78)
T PF00111_consen 1 ITINGKGVTVE-VPPGETLLLDALERAGGIGIPYSCGGGGCGTCRVRVL 48 (78)
T ss_dssp EETTTEEEEEE-EETTSBBHHHHHHHTTTTTSTTSSSSSSSSTTEEEEE
T ss_pred CEECCeEEEEE-eCCCccHHHHHHHHcCCCCcccCCCCCccCCcEEEEe
Confidence 47899999987 888888 999999875688999999999999999875
|
Ferredoxins can be divided into several subgroups depending upon the physiological nature of the iron-sulphur cluster(s) and according to sequence similarities. This entry represents members of the 2Fe-2S ferredoxin family that have a general core structure consisting of beta(2)-alpha-beta(2), which includes putidaredoxin and terpredoxin, and adrenodoxin [, , , ]. They are proteins of around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This conserved region is also found as a domain in various metabolic enzymes and in multidomain proteins, such as aldehyde oxidoreductase (N-terminal), xanthine oxidase (N-terminal), phthalate dioxygenase reductase (C-terminal), succinate dehydrogenase iron-sulphur protein (N-terminal), and methane monooxygenase reductase (N-terminal).; GO: 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding; PDB: 3M9S_C 2FUG_L 3IAS_L 2YBB_3 3IAM_3 3I9V_3 1JQ4_A 1DOX_A 1DOY_A 2KAJ_A .... |
| >PRK12577 succinate dehydrogenase iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00097 Score=78.82 Aligned_cols=69 Identities=26% Similarity=0.402 Sum_probs=53.5
Q ss_pred EEEEeccCCCCCcHHHHHhhC--CCCc---cccCCCCCCCCceEEEEccccccCCcccceeecccccchhc-cC------
Q 000657 28 LRKVLPDGLAHLTLLEYLRDI--GLTG---TKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYS-LE------ 95 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~~--~l~g---~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~-~~------ 95 (1370)
+.++++ +++++|+|+.|+.. .+.+ -..+|..|.||+|.|.||| +++.||.+++.. ++
T Consensus 19 ~~~~v~-~~~~~tvL~~l~~i~~~~d~tL~~~~~c~~~~Cg~C~v~inG----------~~~laC~t~v~~~~~~~~~~~ 87 (329)
T PRK12577 19 QTYTLE-VEPGNTILDCLNRIKWEQDGSLAFRKNCRNTICGSCAMRING----------RSALACKENVGSELARLSDSN 87 (329)
T ss_pred EEEEEE-CCCCChHHHHHHHhCCcCCCCcEEcCCCCCCCCCCCEEEECC----------eeecCcccchhhhhccccccc
Confidence 456665 88999999999973 4433 5678999999999999996 678899999875 22
Q ss_pred --CcEEEEeccccC
Q 000657 96 --GMHVITVEGVGN 107 (1370)
Q Consensus 96 --g~~i~TvEgl~~ 107 (1370)
+...+|||=|++
T Consensus 88 ~~~~~~i~iePl~~ 101 (329)
T PRK12577 88 SGAIPEITIAPLGN 101 (329)
T ss_pred cCCCCeEEEEECCC
Confidence 234678998864
|
|
| >PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0033 Score=73.39 Aligned_cols=157 Identities=15% Similarity=0.212 Sum_probs=99.8
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEc
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 337 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IG 337 (1370)
++.+++ ....|+.|+|.+|+.++++.. . ...++.|||.+.+. .. -.+.++|++++. +..|..+++.+++|
T Consensus 29 t~~igg-~a~~~v~p~~~edl~~~v~~a~~~~ip~~vlGgGSNllv~--d~-g~~gvVI~l~~~--~~~i~~~~~~v~v~ 102 (302)
T PRK14652 29 AVRVGG-PADLLVRPADPDALSALLRAVRELGVPLSILGGGANTLVA--DA-GVRGVVLRLPQD--FPGESTDGGRLVLG 102 (302)
T ss_pred EeecCC-cceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcCCcceeec--CC-CEeeEEEEecCC--cceEEecCCEEEEE
Confidence 455555 456789999999998877633 2 36788999998642 11 123688998752 55666677899999
Q ss_pred ccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccC-CCCChhHHHHhcCCEEEEEeCC
Q 000657 338 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TAS-PISDLNPLWMASGAKFHIVDCK 415 (1370)
Q Consensus 338 A~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~as-p~sD~~p~L~al~A~v~i~s~~ 415 (1370)
|++++.+|.+.+.+. .+. -++..++.+ ||+||++. |+. .-+++.=.+. .+++...+
T Consensus 103 AG~~~~~L~~~~~~~--GL~------------GlE~l~gIP----GTvGGav~mNaGa~ggei~d~v~----~v~vv~~~ 160 (302)
T PRK14652 103 AGAPISRLPARAHAH--GLV------------GMEFLAGIP----GTLGGAVAMNAGTKLGEMKDVVT----AVELATAD 160 (302)
T ss_pred CCCcHHHHHHHHHHc--CCc------------ccccccCCC----cchhHHHHHcCCCCceEhhheEE----EEEEECCC
Confidence 999999999886532 110 112222222 69999995 443 2222222222 45666667
Q ss_pred CCeEEEehhHhhcccccccCCCCeEEEEEEcc
Q 000657 416 GNIRTTMAEEFFLGYRKVDLTSGEILLSIFLP 447 (1370)
Q Consensus 416 g~~R~vpl~dF~~g~~~~~L~~~Eil~~I~iP 447 (1370)
| .++++-+|..-+||...++.+-||+++.+.
T Consensus 161 G-~~~~~~~e~~f~YR~s~~~~~~II~~a~~~ 191 (302)
T PRK14652 161 G-AGFVPAAALGYAYRTCRLPPGAVITRVEVR 191 (302)
T ss_pred C-cEEeehhhcCcccceeccCCCeEEEEEEEE
Confidence 7 777777776667776665544455555444
|
|
| >PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0044 Score=72.56 Aligned_cols=147 Identities=17% Similarity=0.226 Sum_probs=96.5
Q ss_pred CceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHH
Q 000657 270 GLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1370)
Q Consensus 270 ~~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1370)
...++.|.|.+|+.++++-. . ...+++|||.+.+. ... ...++|++++ |+.|+.+++.+++||++++.+|
T Consensus 37 a~~vv~p~~~edv~~~l~~a~~~~ip~~v~GgGSNll~~--d~g-~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~L 110 (305)
T PRK12436 37 ADVFVAPTNYDEIQEVIKYANKYNIPVTFLGNGSNVIIK--DGG-IRGITVSLIH---ITGVTVTGTTIVAQCGAAIIDV 110 (305)
T ss_pred EEEEEecCCHHHHHHHHHHHHHcCCCEEEEcCCeEEEEe--CCC-eeEEEEEeCC---cCcEEEeCCEEEEEeCCcHHHH
Confidence 34688999999998887532 2 36788999999742 121 2367899875 5567777889999999999999
Q ss_pred HHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCCC----CChhHHHHhcCCEEEEEeCCCCeEE
Q 000657 346 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASPI----SDLNPLWMASGAKFHIVDCKGNIRT 420 (1370)
Q Consensus 346 ~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp~----sD~~p~L~al~A~v~i~s~~g~~R~ 420 (1370)
.+.+.+. .+. -+...+ ---+||||++. ||.-. +|.. ..+++...+|..++
T Consensus 111 ~~~~~~~--gl~------------Gle~~~----giPGtVGGav~~NAGayG~~~~dvl-------~~v~vv~~~G~v~~ 165 (305)
T PRK12436 111 SRIALDH--NLT------------GLEFAC----GIPGSVGGALYMNAGAYGGEISFVL-------TEAVVMTGDGELRT 165 (305)
T ss_pred HHHHHHc--CCc------------cchhhc----CCccchhHHHHhcCccchhehheee-------eEEEEEeCCCCEEE
Confidence 9876542 110 011111 13479999996 44432 2222 12344456676889
Q ss_pred EehhHhhcccccccCCCCe-EEEEEEcc
Q 000657 421 TMAEEFFLGYRKVDLTSGE-ILLSIFLP 447 (1370)
Q Consensus 421 vpl~dF~~g~~~~~L~~~E-il~~I~iP 447 (1370)
++-+|..-+||.+.++.+. ||+++.+.
T Consensus 166 ~~~~e~~f~YR~s~~~~~~~iil~a~~~ 193 (305)
T PRK12436 166 LTKEAFEFGYRKSVFANNHYIILEARFE 193 (305)
T ss_pred EEHHHhcCcCCCCcCCCCCEEEEEEEEE
Confidence 9999988899988876532 55544443
|
|
| >PRK13552 frdB fumarate reductase iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.00073 Score=76.15 Aligned_cols=67 Identities=21% Similarity=0.271 Sum_probs=54.5
Q ss_pred EEEEeccCCCCCcHHHHHhh-C----CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEe
Q 000657 28 LRKVLPDGLAHLTLLEYLRD-I----GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~-~----~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 102 (1370)
+.++++ +++++|+|+.|+. . .=-+.+.+|.+|.||+|.|.||| +++.+|.+.+..+.+. .+||
T Consensus 24 ~~y~v~-~~~~~tvLdaL~~Ik~~~D~sL~fr~sCr~giCGsCam~ING----------~~~LAC~t~v~~~~~~-~i~i 91 (239)
T PRK13552 24 VTYQLE-ETPGMTLFIALNRIREEQDPSLQFDFVCRAGICGSCAMVING----------RPTLACRTLTSDYPDG-VITL 91 (239)
T ss_pred EEEEec-CCCCCCHHHHHHHHHhcCCCCeeEeccCCCCCCCCceeEECC----------eEhhhhhccHhhcCCC-cEEE
Confidence 457775 7899999999985 2 32346899999999999999997 8999999999887532 5789
Q ss_pred cccc
Q 000657 103 EGVG 106 (1370)
Q Consensus 103 Egl~ 106 (1370)
|=|.
T Consensus 92 ePl~ 95 (239)
T PRK13552 92 MPLP 95 (239)
T ss_pred EECC
Confidence 9886
|
|
| >PRK06259 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0036 Score=78.34 Aligned_cols=62 Identities=26% Similarity=0.477 Sum_probs=48.9
Q ss_pred EEEeccCCCCCcHHHHHhhC-CCCc----cccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEec
Q 000657 29 RKVLPDGLAHLTLLEYLRDI-GLTG----TKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVE 103 (1370)
Q Consensus 29 ~~~~~~~~~~~~L~~~LR~~-~l~g----~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvE 103 (1370)
.++++ +++++|||+.|++. +.+. .+.+|..|.||+|+|.++| +++.+|.+++. +|..|.+..
T Consensus 22 ~~~v~-~~~~~tvl~al~~~~~~~~~~l~~~~~C~~g~Cg~C~v~v~G----------~~~laC~~~~~--~~~~i~~~~ 88 (486)
T PRK06259 22 SYEVP-VKEGMTVLDALEYINKTYDANIAFRSSCRAGQCGSCAVTING----------EPVLACKTEVE--DGMIIEPLD 88 (486)
T ss_pred EEEEe-CCCCChHHHHHHHhchhcCCCceecCCCCCCCCCCCEEEECC----------eEecccccCCC--CCCEEEecC
Confidence 55664 78999999999973 3223 3789999999999999985 57889999885 577777664
|
|
| >PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0061 Score=71.27 Aligned_cols=156 Identities=22% Similarity=0.335 Sum_probs=103.3
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEc
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIG 337 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IG 337 (1370)
++.+++ ....++.|+|.+|+.++++.. . ...++.|||.+.+. .. -.+..+||+++ .|+.|+.+++.+++|
T Consensus 24 t~~igg-~a~~vv~P~s~edv~~~v~~a~~~~~p~~v~GgGsnll~~--d~-g~~gvvI~l~~--~l~~i~~~~~~v~v~ 97 (298)
T PRK13905 24 SFRVGG-PADYLVEPADIEDLQEFLKLLKENNIPVTVLGNGSNLLVR--DG-GIRGVVIRLGK--GLNEIEVEGNRITAG 97 (298)
T ss_pred eeecCc-eEeEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCceEEec--CC-CcceEEEEecC--CcceEEecCCEEEEE
Confidence 344554 345679999999998887643 2 36788999997642 11 12368899873 577777777899999
Q ss_pred ccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCC----CCChhHHHHhcCCEEEEE
Q 000657 338 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASP----ISDLNPLWMASGAKFHIV 412 (1370)
Q Consensus 338 A~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp----~sD~~p~L~al~A~v~i~ 412 (1370)
|++++.+|.+.+.+. .+. -+...++. -+||||.+. |+.- ++|.. -.+++.
T Consensus 98 aG~~~~~L~~~l~~~--Gl~------------gle~~~gi----pGTVGGai~~NaG~~G~~~~d~v-------~~v~vv 152 (298)
T PRK13905 98 AGAPLIKLARFAAEA--GLS------------GLEFAAGI----PGTVGGAVFMNAGAYGGETADVL-------ESVEVL 152 (298)
T ss_pred CCCcHHHHHHHHHHc--CCC------------cchhccCC----CcchhHHHHHcCCcCceEhheeE-------EEEEEE
Confidence 999999999886542 110 11112232 379999986 3432 23322 135556
Q ss_pred eCCCCeEEEehhHhhcccccccCCC-CeEEEEEEccC
Q 000657 413 DCKGNIRTTMAEEFFLGYRKVDLTS-GEILLSIFLPW 448 (1370)
Q Consensus 413 s~~g~~R~vpl~dF~~g~~~~~L~~-~Eil~~I~iP~ 448 (1370)
..+|..++++-+|.+-+||...+.. ..||+++.+-.
T Consensus 153 ~~~G~~~~~~~~e~~~~yR~s~~~~~~gII~~~~l~l 189 (298)
T PRK13905 153 DRDGEIKTLSNEELGFGYRHSALQEEGLIVLSATFQL 189 (298)
T ss_pred eCCCCEEEEEHHHcCCcCccccCCCCCEEEEEEEEEE
Confidence 6677678888888888898877763 45777776654
|
|
| >PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0039 Score=72.46 Aligned_cols=155 Identities=18% Similarity=0.163 Sum_probs=99.6
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhCC---CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcc
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKYP---DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGA 338 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~~---~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA 338 (1370)
++.+++ .-..|+.|+|.+|+.++++... ...++.|||-+.+.-. . .+.++|.+++ |+.|+.+++.+++||
T Consensus 27 t~~iGG-~A~~~v~p~s~eel~~~~~~~~~~~p~~vlG~GSNlLv~d~--g-~~gvVI~l~~---~~~i~i~~~~v~v~A 99 (297)
T PRK14653 27 SFKIGG-PVPLFAIPNSTNGFIETINLLKEGIEVKILGNGTNVLPKDE--P-MDFVVVSTER---LDDIFVDNDKIICES 99 (297)
T ss_pred EeeeCc-EEEEEEecCCHHHHHHHHHHHhcCCCEEEEcCCeeEEEecC--C-ccEEEEEeCC---cCceEEeCCEEEEeC
Confidence 455666 4457899999999988875432 3678999999988422 1 2367788755 667777778899999
Q ss_pred cccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCCC-CChhHHHHhcCCEEEEEeCCC
Q 000657 339 AVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASPI-SDLNPLWMASGAKFHIVDCKG 416 (1370)
Q Consensus 339 ~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp~-sD~~p~L~al~A~v~i~s~~g 416 (1370)
++++.+|...+.+. .+. -|+.++.. =|||||+++ ||.-. .++.=.+. +|++.+ +|
T Consensus 100 G~~l~~L~~~~~~~--GL~------------GlE~l~gI----PGTVGGAv~mNAGayG~ei~d~l~----~V~~~d-~g 156 (297)
T PRK14653 100 GLSLKKLCLVAAKN--GLS------------GFENAYGI----PGSVGGAVYMNAGAYGWETAENIV----EVVAYD-GK 156 (297)
T ss_pred CCcHHHHHHHHHHC--CCc------------chhhhcCC----chhHHHHHHHhCccCchhhheeEE----EEEEEC-CC
Confidence 99999999875432 111 12334444 389999995 55321 22322222 666666 34
Q ss_pred CeEEEehhHhhcccccccCCCC--eEEEEEEc
Q 000657 417 NIRTTMAEEFFLGYRKVDLTSG--EILLSIFL 446 (1370)
Q Consensus 417 ~~R~vpl~dF~~g~~~~~L~~~--Eil~~I~i 446 (1370)
..++++-+|.--+||...++.. -||+++.+
T Consensus 157 ~v~~~~~~e~~f~YR~S~~~~~~~~iI~~a~f 188 (297)
T PRK14653 157 KIIRLGKNEIKFSYRNSIFKEEKDLIILRVTF 188 (297)
T ss_pred EEEEEchhhccccCccccCCCCCcEEEEEEEE
Confidence 4677888887777877666542 24444443
|
|
| >PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0096 Score=69.76 Aligned_cols=150 Identities=16% Similarity=0.238 Sum_probs=97.4
Q ss_pred CCceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHH
Q 000657 269 GGLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTE 344 (1370)
Q Consensus 269 ~~~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~ 344 (1370)
....|+.|.|.+|+.++++.. . ...+++|||.+.+. .+. ....+|++++ |+.|+.+++.+++||++++.+
T Consensus 36 ~A~~~v~p~~~edv~~~v~~a~~~~ip~~vlGgGSNll~~--d~g-~~GvvI~l~~---l~~i~~~~~~v~v~aG~~~~~ 109 (307)
T PRK13906 36 NADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIR--EGG-IRGIVISLLS---LDHIEVSDDAIIAGSGAAIID 109 (307)
T ss_pred eeEEEEEcCCHHHHHHHHHHHHHcCCCEEEEcCceeEeec--CCC-cceEEEEecC---ccceEEeCCEEEEECCCcHHH
Confidence 345789999999988877533 2 36788999988752 111 1368899865 677777788999999999999
Q ss_pred HHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCCCC-ChhHHHHhcCCEEEEEeCCCCeEEEe
Q 000657 345 LLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASPIS-DLNPLWMASGAKFHIVDCKGNIRTTM 422 (1370)
Q Consensus 345 l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp~s-D~~p~L~al~A~v~i~s~~g~~R~vp 422 (1370)
|.+.+.+. .+. -+...++. -|||||++. |+.-.+ ++.=.|+ .|++...+|..++++
T Consensus 110 l~~~~~~~--Gl~------------GlE~~~gI----PGtVGGav~mNaGayGg~i~D~l~----~v~vv~~~G~~~~~~ 167 (307)
T PRK13906 110 VSRVARDY--ALT------------GLEFACGI----PGSIGGAVYMNAGAYGGEVKDCID----YALCVNEQGSLIKLT 167 (307)
T ss_pred HHHHHHHc--CCc------------cchhhcCC----CccHhHHHHhhCCcchhhhhhhee----EEEEEeCCCCEEEEE
Confidence 99875432 110 01111221 368999995 444331 2222222 345555667688899
Q ss_pred hhHhhcccccccCCCCe-EEEEEEc
Q 000657 423 AEEFFLGYRKVDLTSGE-ILLSIFL 446 (1370)
Q Consensus 423 l~dF~~g~~~~~L~~~E-il~~I~i 446 (1370)
-+|..-+||.+.++.++ ||+++.+
T Consensus 168 ~~e~~f~YR~S~~~~~~~ii~~~~~ 192 (307)
T PRK13906 168 TKELELDYRNSIIQKEHLVVLEAAF 192 (307)
T ss_pred HHHccCcCCcccCCCCCEEEEEEEE
Confidence 99987799988876533 5554443
|
|
| >PRK07570 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.00079 Score=76.20 Aligned_cols=69 Identities=23% Similarity=0.355 Sum_probs=54.7
Q ss_pred EEEEeccCCCCCcHHHHHhh-C-CC-------CccccCCCCCCCCceEEEEccccccCCccccee------ecccccchh
Q 000657 28 LRKVLPDGLAHLTLLEYLRD-I-GL-------TGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCA------VNACLAPLY 92 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~-~-~l-------~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~------v~sCl~~~~ 92 (1370)
+.++++.+++++|+|+.|.. . .+ -+.+.+|.+|.||+|.|.||| ++ ..+|.+.+.
T Consensus 20 q~y~v~~~~~~~tvLd~L~~Ik~~~~~~~~~~l~fr~sCr~~iCGsCam~ING----------~p~~~~~~~LAC~t~~~ 89 (250)
T PRK07570 20 ETYEVDDISPDMSFLEMLDVLNEQLIEKGEEPVAFDHDCREGICGMCGLVING----------RPHGPDRGTTTCQLHMR 89 (250)
T ss_pred EEEEecCCCCCCcHHHHHHHHHHHhhccCCCCeeEeccccCCcCCcceeEECC----------ccCCCCcccchhhhhhh
Confidence 45666436789999999974 1 22 467899999999999999997 67 789999988
Q ss_pred ccCCcEEEEecccc
Q 000657 93 SLEGMHVITVEGVG 106 (1370)
Q Consensus 93 ~~~g~~i~TvEgl~ 106 (1370)
.+.+...+|||=|.
T Consensus 90 ~~~~~~~i~iePl~ 103 (250)
T PRK07570 90 SFKDGDTITIEPWR 103 (250)
T ss_pred hcCCCCeEEEEECC
Confidence 87654567899984
|
|
| >COG0479 FrdB Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0017 Score=72.06 Aligned_cols=67 Identities=28% Similarity=0.376 Sum_probs=56.1
Q ss_pred EEEeccCCCCCcHHHHHhh----C-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEec
Q 000657 29 RKVLPDGLAHLTLLEYLRD----I-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVE 103 (1370)
Q Consensus 29 ~~~~~~~~~~~~L~~~LR~----~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvE 103 (1370)
.++++ .++++++||.|.. + .--..+..|.+|.||+|.+.||| ++..+|.+.+..+... ++|||
T Consensus 21 ~yev~-~~~~~~vLdaL~~Ik~e~d~~Lsfr~sCR~gICGSCam~ING----------~prLAC~t~~~~~~~~-~i~ie 88 (234)
T COG0479 21 TYEVP-YDEGMTVLDALLYIKEEQDPTLSFRRSCREGICGSCAMNING----------KPRLACKTLMKDLEEG-VITIE 88 (234)
T ss_pred EEEec-CCCCCcHHHHHHHHHHhcCCccchhhhccCCcCCcceeEECC----------ccccchhchhhhccCC-ceEEE
Confidence 46665 7799999998863 2 44456899999999999999997 7899999999998766 88999
Q ss_pred cccC
Q 000657 104 GVGN 107 (1370)
Q Consensus 104 gl~~ 107 (1370)
=|.+
T Consensus 89 PL~~ 92 (234)
T COG0479 89 PLPN 92 (234)
T ss_pred ECCC
Confidence 8873
|
|
| >PRK08640 sdhB succinate dehydrogenase iron-sulfur subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0017 Score=73.70 Aligned_cols=66 Identities=24% Similarity=0.411 Sum_probs=53.0
Q ss_pred EEEEeccCCCCCcHHHHHhhC--C---C-------CccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccC
Q 000657 28 LRKVLPDGLAHLTLLEYLRDI--G---L-------TGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLE 95 (1370)
Q Consensus 28 ~~~~~~~~~~~~~L~~~LR~~--~---l-------~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~ 95 (1370)
+.++++ +++++|+|+.|... . + -..+.+|.+|.||+|.|.||| ++..+|.+.+-.+.
T Consensus 23 q~y~v~-~~~~~tvLdaL~~I~~~~~~~~g~~~~~l~fr~sCr~giCGsCam~ING----------~p~LAC~t~v~~~~ 91 (249)
T PRK08640 23 EEFEIP-YRPNMNVISALMEIRRNPVNAKGEKTTPVVWDMNCLEEVCGACSMVING----------KPRQACTALIDQLE 91 (249)
T ss_pred EEEEec-CCCCCcHHHHHHHHHhcccccccccCCCeeEecccCCCCCCcCeeEECC----------ccchhhhChHHHcC
Confidence 457776 78999999999742 2 2 234689999999999999997 78999999998773
Q ss_pred CcEEEEecccc
Q 000657 96 GMHVITVEGVG 106 (1370)
Q Consensus 96 g~~i~TvEgl~ 106 (1370)
..+|||=|.
T Consensus 92 --~~i~iePl~ 100 (249)
T PRK08640 92 --QPIRLEPMS 100 (249)
T ss_pred --CcEEEEECC
Confidence 347899886
|
|
| >PRK12575 succinate dehydrogenase iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0031 Score=70.81 Aligned_cols=66 Identities=23% Similarity=0.286 Sum_probs=51.6
Q ss_pred EEEEeccCCC-CCcHHHHHhh---C-CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEe
Q 000657 28 LRKVLPDGLA-HLTLLEYLRD---I-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1370)
Q Consensus 28 ~~~~~~~~~~-~~~L~~~LR~---~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 102 (1370)
+.++++ +.+ ++|+|+.|.. + +--+.+.+|.+|.||+|.|.||| ++..+|.+.+..+.+ -+||
T Consensus 23 ~~y~v~-~~~~~~tvld~L~~ik~~d~~l~fr~sCr~giCGsCa~~iNG----------~~~LaC~t~~~~~~~--~i~i 89 (235)
T PRK12575 23 QRYEIA-PRAEDRMLLDVLGRVKAQDETLSYRRSCREGICGSDAMNING----------RNGLACLTNMQALPR--EIVL 89 (235)
T ss_pred EEEEec-CCCCCCcHHHHHHHHHhcCCCeeeeccCCCCCCCCCeeEECC----------eEcchhhCcHhHcCC--CEEE
Confidence 346665 554 6799999875 2 33346789999999999999997 799999999998743 2689
Q ss_pred cccc
Q 000657 103 EGVG 106 (1370)
Q Consensus 103 Egl~ 106 (1370)
|=|.
T Consensus 90 ePl~ 93 (235)
T PRK12575 90 RPLP 93 (235)
T ss_pred eECC
Confidence 9885
|
|
| >PRK07860 NADH dehydrogenase subunit G; Validated | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0044 Score=81.92 Aligned_cols=100 Identities=21% Similarity=0.317 Sum_probs=76.2
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhC-----CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-----GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYS 93 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~-----~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~ 93 (1370)
.+|+|+|||+++++. +++||++.++.. +|...+.-+..|.|.-|.|.|++. .+.+.||.+|+.
T Consensus 3 ~~v~~~idg~~~~~~---~g~til~aa~~~gi~ip~~C~~~~l~~~g~Cr~C~Vev~g~--------~~~~~aC~t~v~- 70 (797)
T PRK07860 3 DLVTLTIDGVEVSVP---KGTLVIRAAELLGIQIPRFCDHPLLDPVGACRQCLVEVEGQ--------RKPQASCTTTVT- 70 (797)
T ss_pred ceEEEEECCEEEEeC---CCChHHHHHHHcCCCCCeecCCCCCCCCcccCccEEEECCC--------cccccccCCCCC-
Confidence 468999999998754 899999999864 455556666799999999999862 146899999986
Q ss_pred cCCcEEEEe---ccccCCCCCCCHHHHHHHHcCCCCCCCCChHH
Q 000657 94 LEGMHVITV---EGVGNRKHGLHPIQESLVRSHGSQCGFCTPGF 134 (1370)
Q Consensus 94 ~~g~~i~Tv---Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~ 134 (1370)
+|+.|.|- |=+. ..-.-+.+-+...|-..|..|.-+-
T Consensus 71 -~gm~V~t~~~s~~v~---~~r~~~le~ll~~hp~dC~~C~~~g 110 (797)
T PRK07860 71 -DGMVVKTQLTSPVAD---KAQHGVMELLLINHPLDCPVCDKGG 110 (797)
T ss_pred -CCcEEEeCCCCHHHH---HHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 79999983 2221 1224466677788999999998763
|
|
| >TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.028 Score=65.25 Aligned_cols=157 Identities=15% Similarity=0.203 Sum_probs=98.2
Q ss_pred ccccCCCCceEEecCCHHHHHHHHhhC----CCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcc
Q 000657 263 LNLSGFGGLKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGA 338 (1370)
Q Consensus 263 ~~~~~~~~~~~~~P~sl~e~l~ll~~~----~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA 338 (1370)
+.+++ ....|+.|+|.+|+.++++.. -...+++|||.+.+.- .....++|++.+-.. .+...+..+++||
T Consensus 7 ~~igg-~a~~~v~p~s~edl~~~l~~a~~~~~p~~vlGgGSNll~~d---~~~~gvvi~l~~~~~--~~~~~~~~v~v~a 80 (284)
T TIGR00179 7 YKIGG-NARHIVCPESIEQLVNVLDNAKEEDQPLLILGEGSNLLILD---DGRGGVIINLGKGID--IEDDEGEYVHVGG 80 (284)
T ss_pred eecCc-eeeEEEEeCCHHHHHHHHHHHHHcCCCEEEEecceEEEEcc---CCcCeEEEECCCCce--EEEecCCEEEEEc
Confidence 34455 446799999999998877532 2467899999998632 122358899866322 2223346799999
Q ss_pred cccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccc-cCCCCC-hhHHHHhcCCEEEEEeCCC
Q 000657 339 AVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-ASPISD-LNPLWMASGAKFHIVDCKG 416 (1370)
Q Consensus 339 ~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~-asp~sD-~~p~L~al~A~v~i~s~~g 416 (1370)
++++.+|.+.+.+. .+. -+...++.+ |||||++.+ |.-.+- +.=.| -.+++...+|
T Consensus 81 G~~~~~l~~~~~~~--Gl~------------GlE~l~giP----GtvGGai~mNAGayG~~i~d~l----~~v~vv~~~G 138 (284)
T TIGR00179 81 GENWHKLVKYALKN--GLS------------GLEFLAGIP----GTVGGAVIMNAGAYGVEISEVL----VYATILLATG 138 (284)
T ss_pred CCcHHHHHHHHHHC--CCc------------ccccCCCCC----chHHHHHHHhcccchhehhheE----EEEEEEeCCC
Confidence 99999999876432 110 111222222 589999954 432211 11011 1345556777
Q ss_pred CeEEEehhHhhcccccccCCCCe--EEEEEEcc
Q 000657 417 NIRTTMAEEFFLGYRKVDLTSGE--ILLSIFLP 447 (1370)
Q Consensus 417 ~~R~vpl~dF~~g~~~~~L~~~E--il~~I~iP 447 (1370)
..++++-+|..-+||.+.++... ++++..+.
T Consensus 139 ~~~~~~~~~~~f~YR~S~f~~~~~~iil~a~~~ 171 (284)
T TIGR00179 139 KTEWLTNEQLGFGYRTSIFQHKYVGLVLKAEFQ 171 (284)
T ss_pred CEEEEEHHHccccCCccccCCCCcEEEEEEEEE
Confidence 67899999988899998887643 55555443
|
This model describes MurB, UDP-N-acetylenolpyruvoylglucosamine reductase, which is also called UDP-N-acetylmuramate dehydrogenase. It is part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide that is a precursor of bacterial peptidoglycan. |
| >PLN00129 succinate dehydrogenase [ubiquinone] iron-sulfur subunit | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0039 Score=71.31 Aligned_cols=66 Identities=20% Similarity=0.226 Sum_probs=51.3
Q ss_pred EEEeccCCC-CCcHHHHHhh-C----CCCccccCCCCCCCCceEEEEccccccCCcccceeecccccchhccCCcEEEEe
Q 000657 29 RKVLPDGLA-HLTLLEYLRD-I----GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1370)
Q Consensus 29 ~~~~~~~~~-~~~L~~~LR~-~----~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~Tv 102 (1370)
.++++ +.+ ++|+||.|+. . .=-..+.+|.+|.||+|.|.||| ++..+|.+.+..+.+. .+||
T Consensus 63 ~y~v~-~~~~~~tVLd~L~~Ik~~~D~sLsfr~sCr~giCGsCam~ING----------~p~LAC~t~v~~~~~~-~i~i 130 (276)
T PLN00129 63 SYKVD-LNDCGPMVLDVLIKIKNEQDPSLTFRRSCREGICGSCAMNIDG----------KNTLACLTKIDRDESG-PTTI 130 (276)
T ss_pred EEEeC-CCCCCchHHHHHHHHHHcCCCCeEEeccCCCCCCCCCeeEECC----------cccccccccHhhcCCC-cEEE
Confidence 35564 555 7999999975 2 33346899999999999999997 7899999999877433 4679
Q ss_pred cccc
Q 000657 103 EGVG 106 (1370)
Q Consensus 103 Egl~ 106 (1370)
|=|.
T Consensus 131 ePl~ 134 (276)
T PLN00129 131 TPLP 134 (276)
T ss_pred EECC
Confidence 9886
|
|
| >PTZ00305 NADH:ubiquinone oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.013 Score=66.78 Aligned_cols=97 Identities=26% Similarity=0.357 Sum_probs=69.4
Q ss_pred ceEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCcccc----CC-CCCCCCceEEEEccccccCCcccceeecccccchh
Q 000657 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKL----GC-GEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLY 92 (1370)
Q Consensus 18 ~~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~----gC-~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 92 (1370)
+-...++|||+++++ +++++|||+..|+.|+.=... +. ..|.|.-|.|-|++. .+.+.||.+|+.
T Consensus 66 ~~~~~I~IDGk~VeV--~~~G~TILeAAr~~GI~IPtLCy~~~L~p~G~CRlClVEVeG~--------~~lv~AC~tpV~ 135 (297)
T PTZ00305 66 KPRAIMFVNKRPVEI--IPQEENLLEVLEREGIRVPKFCYHPILSVAGNCRMCLVQVDGT--------QNLVVSCATVAL 135 (297)
T ss_pred CCceEEEECCEEEEe--cCCCChHHHHHHHcCCCcCccccCCCCCCCCccceeEEEECCC--------cCcccccCCcCC
Confidence 346789999999976 247999999999865443322 22 378999999999852 157999999986
Q ss_pred ccCCcEEEEeccccCCCCCCCH----HHHHHHHcCCCCCCCCCh
Q 000657 93 SLEGMHVITVEGVGNRKHGLHP----IQESLVRSHGSQCGFCTP 132 (1370)
Q Consensus 93 ~~~g~~i~TvEgl~~~~~~~~~----iq~a~~~~~~~qCG~Ctp 132 (1370)
+|+.|.|- ...+.. +.+-+...|-.-|.-|.-
T Consensus 136 --eGM~V~T~------Se~v~~~Rk~vLElLLs~Hp~DC~~C~k 171 (297)
T PTZ00305 136 --PGMSIITD------SRLVRDAREGNVELILINHPNDCPICEQ 171 (297)
T ss_pred --CCCEEEeC------CHHHHHHHHHHHHHHHhcCCCcCCcccC
Confidence 79999982 233333 444556667777777765
|
|
| >PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.05 Score=63.34 Aligned_cols=157 Identities=17% Similarity=0.239 Sum_probs=104.1
Q ss_pred CCccccCCCCceEEecCCHHHHHHHHhhC----CCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEE
Q 000657 261 NPLNLSGFGGLKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEI 336 (1370)
Q Consensus 261 ~~~~~~~~~~~~~~~P~sl~e~l~ll~~~----~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~I 336 (1370)
.++.+++ .-..|+.|+|.+|+.++++.. -...++.||+-+.+.- ....+..+|.+.+ ++.|+..++.+++
T Consensus 25 tt~~iGG-~A~~~~~p~~~~eL~~~l~~~~~~~~p~~vlG~GSNlLv~D--~g~~~g~vi~~~~---~~~i~~~~~~v~a 98 (302)
T PRK14650 25 TTYKIGG-ISKLFLTPKTIKDAEHIFKAAIEEKIKIFILGGGSNILIND--EEEIDFPIIYTGH---LNKIEIHDNQIVA 98 (302)
T ss_pred ceeeeCc-EEEEEEecCCHHHHHHHHHHHHHcCCCEEEEeceeEEEEEC--CCccceEEEEECC---cCcEEEeCCEEEE
Confidence 4566666 456788999999999888643 2367899999988732 2112245666543 6777777788999
Q ss_pred cccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccC----CCCChhHHHHhcCCEEEE
Q 000657 337 GAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TAS----PISDLNPLWMASGAKFHI 411 (1370)
Q Consensus 337 GA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~as----p~sD~~p~L~al~A~v~i 411 (1370)
||++++.+|.....+. .+ .-++..++.+ ||+||-++ ||. -++|.. -+|++
T Consensus 99 ~AG~~~~~l~~~~~~~--gl------------~GlE~l~gIP----GTVGGAv~mNAGayG~ei~d~l-------~sV~~ 153 (302)
T PRK14650 99 ECGTNFEDLCKFALQN--EL------------SGLEFIYGLP----GTLGGAIWMNARCFGNEISEIL-------DKITF 153 (302)
T ss_pred EeCCcHHHHHHHHHHc--CC------------chhhhhcCCC----cchhHHHHhhCCccccchheeE-------EEEEE
Confidence 9999999999874321 11 1133344443 78888774 442 234543 24555
Q ss_pred EeCCCCeEEEehhHhhcccccccCCC-CeEEEEEEccC
Q 000657 412 VDCKGNIRTTMAEEFFLGYRKVDLTS-GEILLSIFLPW 448 (1370)
Q Consensus 412 ~s~~g~~R~vpl~dF~~g~~~~~L~~-~Eil~~I~iP~ 448 (1370)
...+|..++++-+|.--+||...++. +.||+++.+..
T Consensus 154 ~d~~g~~~~~~~~e~~f~YR~S~f~~~~~iIl~a~f~L 191 (302)
T PRK14650 154 IDEKGKTICKKFKKEEFKYKISPFQNKNTFILKATLNL 191 (302)
T ss_pred EECCCCEEEEEHHHcCcccccccCCCCCEEEEEEEEEE
Confidence 66666688899999888999888875 34666665544
|
|
| >PRK10713 2Fe-2S ferredoxin YfaE; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.0099 Score=56.00 Aligned_cols=48 Identities=25% Similarity=0.483 Sum_probs=38.6
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
.|+|.-+|+.+.+. +.+.+||+.|++.|+ ....+|.+|.||+|.+-+-
T Consensus 3 ~v~~~~~~~~~~~~--~~~~tlL~a~~~~gi-~~p~~Cr~G~Cg~C~~~~~ 50 (84)
T PRK10713 3 RVTLRITGTQLLCQ--DEHPSLLAALESHNV-AVEYQCREGYCGSCRTRLV 50 (84)
T ss_pred EEEEEeCCcEEEec--CCCCcHHHHHHHcCC-CCCCCCCCeECCCCEeEEE
Confidence 46677778776543 245999999999887 6889999999999999773
|
|
| >TIGR02008 fdx_plant ferredoxin [2Fe-2S] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.0096 Score=57.70 Aligned_cols=43 Identities=19% Similarity=0.451 Sum_probs=36.3
Q ss_pred CCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 26 NGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 26 Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
+|..+.++ ++++.+||+.|++.|+ ....+|+.|.||.|.|-|-
T Consensus 11 ~~~~~~~~-~~~g~tLLda~~~~Gi-~i~~~C~~G~Cg~C~v~v~ 53 (97)
T TIGR02008 11 DGGEETIE-CPDDQYILDAAEEAGI-DLPYSCRAGACSTCAGKVE 53 (97)
T ss_pred CCCEEEEE-ECCCCcHHHHHHHcCC-CCCcCCCCccCCCCceEEE
Confidence 77556665 7799999999998886 4789999999999999773
|
This model represents single domain 2Fe-2S (also called plant type) ferredoxins. In general, these occur as a single domain proteins or with a chloroplast transit peptide. Species tend to be photosynthetic, but several forms may occur in one species and individually may not be associated with photocynthesis. Halobacterial forms differ somewhat in architecture; they score between trusted and noise cutoffs. Sequences scoring below the noise cutoff tend to be ferredoxin-related domains of larger proteins. |
| >TIGR01973 NuoG NADH-quinone oxidoreductase, chain G | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.012 Score=75.82 Aligned_cols=93 Identities=25% Similarity=0.498 Sum_probs=70.8
Q ss_pred EEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCC------CCCCCceEEEEccccccCCcccceeecccccchhccCC
Q 000657 23 LYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG------EGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEG 96 (1370)
Q Consensus 23 ~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g 96 (1370)
|+|||+++++. +++||++.+++.|+.-. .=|. .|.|.-|.|.+++.. + +.+.||.+|+. +|
T Consensus 1 ~~idg~~~~~~---~g~~il~a~~~~gi~ip-~~C~~~~l~~~g~Cr~C~v~v~g~~----~---~~~~aC~~~~~--~g 67 (603)
T TIGR01973 1 IFIDGKELEVP---KGTTVLQACLSAGIEIP-RFCYHEKLSIAGNCRMCLVEVEKFP----D---KPVASCATPVT--DG 67 (603)
T ss_pred CEECCEEEEeC---CCCHHHHHHHHcCCCcc-ccCCCCCCCCCCccccCEEEECCCC----C---CcccccCCCCC--CC
Confidence 58999998764 89999999998765433 3575 899999999998621 1 37999999976 79
Q ss_pred cEEEEeccccCCCCCC----CHHHHHHHHcCCCCCCCCChHH
Q 000657 97 MHVITVEGVGNRKHGL----HPIQESLVRSHGSQCGFCTPGF 134 (1370)
Q Consensus 97 ~~i~TvEgl~~~~~~~----~~iq~a~~~~~~~qCG~CtpG~ 134 (1370)
+.|.|- ..++ .-+.+.+...|-.-|..|.-+-
T Consensus 68 m~v~t~------~~~~~~~r~~~~e~ll~~h~~dC~~C~~~g 103 (603)
T TIGR01973 68 MKISTN------SEKVKKAREGVMEFLLINHPLDCPICDQGG 103 (603)
T ss_pred CEEEeC------CHHHHHHHHHHHHHHHhcCCCCCCcCCCCC
Confidence 999982 2333 3355667777888999999863
|
This model represents the G subunit (one of 14: A-N) of the NADH-quinone oxidoreductase complex I which generally couples NADH and ubiquinone oxidation/reduction in bacteria and mammalian mitochondria while translocating protons, but may act on NADPH and/or plastoquinone in cyanobacteria and plant chloroplasts. This model excludes related subunits from formate dehydrogenase complexes. |
| >PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.024 Score=58.39 Aligned_cols=102 Identities=13% Similarity=0.158 Sum_probs=70.7
Q ss_pred eEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHH
Q 000657 272 KWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLK 347 (1370)
Q Consensus 272 ~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~ 347 (1370)
.+++|+|.+|+.++++.. . ..++.+||+...-. .......+||+++++....+..++..++++|++++.||.+
T Consensus 3 ~vv~P~s~~ev~~~v~~a~~~~~~v~~~g~G~~~~~~---~~~~~~ivi~~~~l~~i~~id~~~~~v~v~aG~~~~~l~~ 79 (139)
T PF01565_consen 3 AVVRPKSVEEVQAIVKFANENGVPVRVRGGGHSWTGQ---SSDEGGIVIDMSRLNKIIEIDPENGTVTVGAGVTWGDLYE 79 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTSEEEEESSSTTSSST---TSSTTEEEEECTTCGCEEEEETTTTEEEEETTSBHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCcccc---cccCCcEEEeeccccccccccccceeEEEeccccchhccc
Confidence 478999999999887754 2 35677888887531 1135678999998665444555578999999999999999
Q ss_pred HHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccC
Q 000657 348 MFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 393 (1370)
Q Consensus 348 ~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~as 393 (1370)
.|.+.-..++ -.+.--.-+|+||.+++..
T Consensus 80 ~l~~~g~~~~-----------------~~~~~~~~~tvGG~i~~~~ 108 (139)
T PF01565_consen 80 ALAPRGLMLP-----------------VEPGSGIPGTVGGAIAGNG 108 (139)
T ss_dssp HHHHHTEEES-----------------SGGGSTTTSBHHHHHHTT-
T ss_pred cccccccccc-----------------ccccccccceEchhhcCCC
Confidence 8754322111 1233345679999998754
|
One of the enzymes Vanillyl-alcohol oxidase (VAO, 1.1.3.38 from EC) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110 []. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyses the oxidation of a wide variety of substrates, ranging from aromatic amines to 4-alkylphenols. ; GO: 0008762 UDP-N-acetylmuramate dehydrogenase activity, 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZR6_A 3HSU_A 2AXR_A 3D2J_A 3D2H_A 3FW9_A 3FW8_A 3FW7_A 3GSY_A 3FWA_A .... |
| >CHL00134 petF ferredoxin; Validated | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.015 Score=56.64 Aligned_cols=43 Identities=19% Similarity=0.495 Sum_probs=37.7
Q ss_pred CCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 26 NGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 26 Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
+|..+.++ ++++.+||+.|++.|+ ....+|+.|.||.|.|-+-
T Consensus 13 ~~~~~~~~-~~~~~tLL~a~~~~Gi-~i~~~C~~G~Cg~C~v~v~ 55 (99)
T CHL00134 13 EGIDVTID-CPDDVYILDAAEEQGI-DLPYSCRAGACSTCAGKVT 55 (99)
T ss_pred CCCeEEEE-ECCCCcHHHHHHHcCC-CCCcCCCCccCCCCEEEEE
Confidence 77776775 8899999999999886 7889999999999999874
|
|
| >PRK09130 NADH dehydrogenase subunit G; Validated | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.019 Score=74.66 Aligned_cols=94 Identities=29% Similarity=0.442 Sum_probs=69.8
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCC------CCCCCceEEEEccccccCCcccceeecccccchhcc
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG------EGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL 94 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~ 94 (1370)
++++|||+++++. +++|||+..|+.|+.=.. =|- .|.|.-|.|.+++.. .+++.||.+|+.
T Consensus 2 ~~~~Idg~~v~v~---~g~til~a~~~~gi~IP~-lCy~~~l~~~g~Cr~ClVev~~~~-------~~~~~sC~~~v~-- 68 (687)
T PRK09130 2 VKLKVDGKEIEVP---DGYTLLQACEAAGAEIPR-FCYHERLSIAGNCRMCLVEVKGGP-------PKPVASCAMPVG-- 68 (687)
T ss_pred eEEEECCEEEEeC---CCCHHHHHHHHcCCCcCc-ccCCCCCCCCCCCCCCEEEECCCC-------CCcccccCCCCC--
Confidence 7899999998754 899999999987765433 353 799999999997510 157999999976
Q ss_pred CCcEEEEeccccCCCCCC----CHHHHHHHHcCCCCCCCCChH
Q 000657 95 EGMHVITVEGVGNRKHGL----HPIQESLVRSHGSQCGFCTPG 133 (1370)
Q Consensus 95 ~g~~i~TvEgl~~~~~~~----~~iq~a~~~~~~~qCG~CtpG 133 (1370)
+|+.|.| ..... .-+.+-+...|-.-|..|.-|
T Consensus 69 ~gm~v~T------~s~~v~~~r~~~le~ll~~Hp~dC~~C~~~ 105 (687)
T PRK09130 69 EGMVIFT------NTPMVKKAREGVMEFLLINHPLDCPICDQG 105 (687)
T ss_pred CCCEEEe------CCHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 7999998 22333 334555666777778777653
|
|
| >PRK09129 NADH dehydrogenase subunit G; Validated | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.013 Score=77.70 Aligned_cols=106 Identities=22% Similarity=0.359 Sum_probs=75.5
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCC------CCCCCceEEEEccccccCCcccceeecccccchhc
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG------EGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYS 93 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~ 93 (1370)
+|+|+|||+++++. +++||++.++..|..-. .=|- .|.|.-|.|.+++.. +.+.||.+|+.
T Consensus 1 m~~~~idg~~~~~~---~g~~il~a~~~~g~~ip-~~c~~~~~~~~~~C~~C~v~v~~~~--------~~~~aC~~~~~- 67 (776)
T PRK09129 1 MVEIEIDGKKVEVP---EGSMVIEAADKAGIYIP-RFCYHKKLSIAANCRMCLVEVEKAP--------KPLPACATPVT- 67 (776)
T ss_pred CeEEEECCEEEEeC---CCCHHHHHHHHcCCCCC-cccCCCCCCCCCCcceeEEEECCCC--------CcCcccCCCCC-
Confidence 37899999999764 89999999998654332 1243 689999999998621 45899999986
Q ss_pred cCCcEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHHHHHHHHH
Q 000657 94 LEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSL 141 (1370)
Q Consensus 94 ~~g~~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~v~~~~~l 141 (1370)
+|+.|.|-.--- .+.-.-+-+.+...|-..|..|..+-=.-+-.+
T Consensus 68 -~gm~v~t~~~~~--~~~r~~~l~~ll~~h~~~C~~c~~~g~C~Lq~~ 112 (776)
T PRK09129 68 -DGMKVFTRSEKA--LKAQKSVMEFLLINHPLDCPICDQGGECQLQDL 112 (776)
T ss_pred -CCCEEEcCCHHH--HHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHH
Confidence 799999821100 011234556677789999999998765544443
|
|
| >COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.021 Score=70.83 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=77.8
Q ss_pred ceEEecCCHHHHHHHHhhCC--C--cEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHH
Q 000657 271 LKWYRPLKLQHLLELKSKYP--D--SKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 346 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~~--~--a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~ 346 (1370)
..+..|+|.+|+.++++... + ....+|||++.-...-. . .++||+.++..+..|..++..+++.+++++.+|.
T Consensus 33 ~~v~~p~s~~eV~~iv~~a~~~~~~v~prG~gts~~g~~~~~-~--gvvl~l~~mn~i~~id~~~~~~~v~aGv~l~~l~ 109 (459)
T COG0277 33 LAVVFPKSEEEVAAILRLANENGIPVVPRGGGTSLSGGAVPD-G--GVVLDLSRLNRILEIDPEDGTATVQAGVTLEDLE 109 (459)
T ss_pred CEEEccCCHHHHHHHHHHHHHcCCeEEEECCCCCccccccCC-C--cEEEEchhhcchhccCcCCCEEEEcCCccHHHHH
Confidence 46889999999988877652 2 56679999986533222 1 7899999966666666678899999999999999
Q ss_pred HHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccC
Q 000657 347 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 393 (1370)
Q Consensus 347 ~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~as 393 (1370)
+.|++.--.++ ..++.++.+||||||++.+
T Consensus 110 ~~l~~~G~~~p-----------------~~p~s~~~~tIGG~ia~~~ 139 (459)
T COG0277 110 KALAPHGLFLP-----------------VDPSSSGTATIGGNIATNA 139 (459)
T ss_pred HHHHHcCCccC-----------------CCccccccceEccchhcCC
Confidence 98765422222 4677779999999999864
|
|
| >PLN03136 Ferredoxin; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.026 Score=58.67 Aligned_cols=50 Identities=14% Similarity=0.300 Sum_probs=38.8
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
.+|.|.-++...+++ ++++.+|||.+++.|+. ...+|+.|.||.|.+-+-
T Consensus 55 ~~V~l~~~~~~~~~~-~~~g~tILdAa~~~Gi~-lp~sCr~G~CGtC~~~l~ 104 (148)
T PLN03136 55 YKVKFITPEGEQEVE-CEEDVYVLDAAEEAGID-LPYSCRAGSCSSCAGKVV 104 (148)
T ss_pred EEEEEecCCCcEEEE-eCCCCcHHHHHHHcCCC-CCcCCCCccCCCCEEEEe
Confidence 345554354445564 77999999999998854 889999999999999873
|
|
| >PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.15 Score=59.53 Aligned_cols=145 Identities=12% Similarity=0.146 Sum_probs=92.1
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCC--cEE
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDD--GLE 335 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~--~l~ 335 (1370)
++.+++ ....|+.|+|.+|+.++++.. . ...++.||+-+.+.- .-....+|+++.- .+ .+..+++ .++
T Consensus 14 t~~iGg-~a~~~v~p~~~~dl~~~l~~~~~~~ip~~vlG~GSNlL~~d---~g~~GvVI~l~~~-~~-~i~~~~~~~~v~ 87 (295)
T PRK14649 14 SWRIGG-PARYFVEPTTPDEAIAAAAWAEQRQLPLFWLGGGSNLLVRD---EGFDGLVARYRGQ-RW-ELHEHGDTAEVW 87 (295)
T ss_pred EeeeCc-eeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEecceeEEEeC---CCcCeEEEEecCC-Cc-EEEEeCCcEEEE
Confidence 455666 456788899999999887533 2 367899999987632 1133578887542 23 4444445 699
Q ss_pred EcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccc-cccCC----CCChhHHHHhcCCEEE
Q 000657 336 IGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNI-CTASP----ISDLNPLWMASGAKFH 410 (1370)
Q Consensus 336 IGA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl-~~asp----~sD~~p~L~al~A~v~ 410 (1370)
+||++++.++...+.+. .+. -++..++. -||+||-+ ||+.- ++|.. . .|+
T Consensus 88 v~AG~~~~~l~~~~~~~--GL~------------GlE~l~GI----PGTvGGa~~mNaGayg~ei~d~l---~----~V~ 142 (295)
T PRK14649 88 VEAGAPMAGTARRLAAQ--GWA------------GLEWAEGL----PGTIGGAIYGNAGCYGGDTATVL---I----RAW 142 (295)
T ss_pred EEcCCcHHHHHHHHHHc--CCc------------cccccCCC----CcchhHHHHhhccccceEhheeE---E----EEE
Confidence 99999999999875431 111 01112222 26888844 56543 34433 2 245
Q ss_pred EEeCCCCeEEEehhHhhcccccccCCC
Q 000657 411 IVDCKGNIRTTMAEEFFLGYRKVDLTS 437 (1370)
Q Consensus 411 i~s~~g~~R~vpl~dF~~g~~~~~L~~ 437 (1370)
+...+|..++++-+|.+-|||.+.++.
T Consensus 143 ~~~~~g~~~~~~~~el~f~YR~S~~~~ 169 (295)
T PRK14649 143 LLLNGSECVEWSVHDFAYGYRTSVLKQ 169 (295)
T ss_pred EEeCCCCEEEEeHHHcCcccceeeccc
Confidence 556666688899999888898776653
|
|
| >PTZ00038 ferredoxin; Provisional | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.04 Score=59.53 Aligned_cols=49 Identities=20% Similarity=0.372 Sum_probs=38.2
Q ss_pred eEEEEEEC-CEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 19 KEAILYVN-GLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 19 ~~i~~~~N-g~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
-.|+|.++ | ...++ +.++++||+.|++.|+ ....+|+.|.||.|.|-+-
T Consensus 96 ~~Vt~~~~~g-~~~~~-v~~geTILdAae~aGI-~lp~sCr~G~CGtCkvrV~ 145 (191)
T PTZ00038 96 YNITLQTPDG-EKVIE-CDEDEYILDAAERQGV-ELPYSCRGGSCSTCAAKLL 145 (191)
T ss_pred EEEEEEeCCC-cEEEE-eCCCCcHHHHHHHcCC-CCCcCCCCccCCCCEeEEe
Confidence 35666533 4 23444 6789999999999886 7889999999999999773
|
|
| >TIGR01676 GLDHase galactonolactone dehydrogenase | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.09 Score=65.71 Aligned_cols=130 Identities=8% Similarity=0.060 Sum_probs=82.9
Q ss_pred ceEEecCCHHHHHHHHhhCC----CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHH
Q 000657 271 LKWYRPLKLQHLLELKSKYP----DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 346 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~~----~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~ 346 (1370)
..+++|+|.+|+.++++... ..+.++||++..-.. .....+||++++..+-.|..+...++++|++++.+|.
T Consensus 63 ~~~~~P~s~eEV~~iV~~A~~~g~~Vr~~GsGhS~sg~a----~t~g~lldL~~ln~Vl~vD~~~~tVtV~AG~~l~~L~ 138 (541)
T TIGR01676 63 RTFHQPEAIEELEGIVKQANEKKARIRPVGSGLSPNGIG----LSRAGMVNLALMDKVLEVDEEKKRVRVQAGIRVQQLV 138 (541)
T ss_pred ceEECCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCcc----cCCCeEEEhhhCCCCEEEcCCCCEEEEcCCCCHHHHH
Confidence 56899999999999887642 367888888763311 1124589999877776677777889999999999999
Q ss_pred HHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCC-ChhHHHHhcCCEEEEEeCCCCeEEEe
Q 000657 347 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPIS-DLNPLWMASGAKFHIVDCKGNIRTTM 422 (1370)
Q Consensus 347 ~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~s-D~~p~L~al~A~v~i~s~~g~~R~vp 422 (1370)
+.|.+.--. +.+..--+..||||+|+++..-+ --...+...=-.++|+..+|+.+++.
T Consensus 139 ~~L~~~Gla------------------l~n~gsi~~~TIGGaiatgtHGtg~~~G~l~d~V~~l~lVta~G~vv~~s 197 (541)
T TIGR01676 139 DAIKEYGIT------------------LQNFASIREQQIGGIIQVGAHGTGAKLPPIDEQVIAMKLVTPAKGTIEIS 197 (541)
T ss_pred HHHHHcCCE------------------eccCCCCCCceEccccccCCcCCCCCCCCHHHhEEEEEEEECCCCEEEEC
Confidence 886542111 12222235578999999864321 11122222222355666655455543
|
This model represents L-Galactono-gamma-lactone dehydrogenase (EC 1.3.2.3). This enzyme catalyzes the final step in ascorbic acid biosynthesis in higher plants. This protein is homologous to ascorbic acid biosynthesis enzymes of other species: L-gulono-gamma-lactone oxidase in rat and L-galactono-gamma-lactone oxidase in yeast. All three covalently bind the cofactor FAD. |
| >PRK08166 NADH dehydrogenase subunit G; Validated | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.034 Score=74.42 Aligned_cols=103 Identities=22% Similarity=0.332 Sum_probs=73.7
Q ss_pred EEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCC------CCCCCceEEEEccccccCCcccceeecccccchhcc
Q 000657 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG------EGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL 94 (1370)
Q Consensus 21 i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~------~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~ 94 (1370)
++|+|||+++++ .+++|||+.++..|+. +-..|. .|.|+.|.|.+.+- +.++ ....+.||.+|+.
T Consensus 2 ~~i~idg~~~~~---~~g~til~a~~~~gi~-ip~~C~~~~~~~~G~C~~C~v~v~~g-~~~~--~~~~~~aC~~~v~-- 72 (847)
T PRK08166 2 ATIHVDGKEYEV---NGADNLLEACLSLGID-IPYFCWHPALGSVGACRQCAVKQYQN-PEDT--RGRLVMSCMTPAT-- 72 (847)
T ss_pred eEEEECCEEEEe---CCCCHHHHHHHHcCCC-CCccccCCCCCCCCccCCCeEEEeec-CccC--CCCcccCcCCCCC--
Confidence 689999999765 4899999999987653 346787 69999999998420 0011 1246889999876
Q ss_pred CCcEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChHH
Q 000657 95 EGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGF 134 (1370)
Q Consensus 95 ~g~~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~ 134 (1370)
+|+.|.|-.--- ...-.-+.+-+...|-..|..|.-+-
T Consensus 73 ~gm~v~t~~~~~--~~~r~~~~e~ll~~hp~dc~~c~~~g 110 (847)
T PRK08166 73 DGTFISIDDPEA--KAFRASVVEWLMTNHPHDCPVCEEGG 110 (847)
T ss_pred CCCEEEeCCHHH--HHHHHHHHHHHHhcCCCCCCccCCCC
Confidence 599998832110 11223467778889999999998663
|
|
| >PRK11872 antC anthranilate dioxygenase reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.03 Score=66.86 Aligned_cols=48 Identities=25% Similarity=0.401 Sum_probs=40.9
Q ss_pred EEEEE---CCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 21 AILYV---NGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 21 i~~~~---Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
.+++| ||+.+..+ +.++.|||+.|++.|+ ....+|++|.||.|.|-+-
T Consensus 3 ~~v~~~~~~~~~~~~~-~~~g~tlL~a~~~~g~-~~p~~C~~G~Cg~C~~~~~ 53 (340)
T PRK11872 3 HKVALSFADGKTLFFP-VGKDELLLDAALRNGI-NLPLDCREGVCGTCQGRCE 53 (340)
T ss_pred eEEEEEecCCcEEEEE-eCCCCcHHHHHHHcCC-CCcCCCCCeECCCCEEEEE
Confidence 45666 99988775 7899999999998886 6788999999999999773
|
|
| >PRK11183 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.062 Score=66.38 Aligned_cols=106 Identities=23% Similarity=0.187 Sum_probs=69.7
Q ss_pred ceEEecCCHHHHHHHHhhCC--C--cEEEeccCccee-eeeec--ccccceEEecCCcccccceeecCCcEEEcccccHH
Q 000657 271 LKWYRPLKLQHLLELKSKYP--D--SKLLVGNTEVGI-EMRLK--RMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLT 343 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~~--~--a~lvaGgTdl~v-~~k~~--~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~ 343 (1370)
..-..|.|.+|..++++--- + ...-+|||+|.- ..-.+ .....++||+.+...+..|. ++..+++.++||+.
T Consensus 40 ~AVV~P~SteEVa~IVklC~e~~vPVIPRGgGTGLtGGAvP~~~~~dR~gVVIsl~RMNrIleID-~~~~VvVePGVtl~ 118 (564)
T PRK11183 40 LAVVFPGTLLELWRVLQACVAADKIIIMQAANTGLTGGSTPNGNDYDRDIVIISTLRLDKIQLLN-NGKQVLALPGTTLY 118 (564)
T ss_pred CEEEecCCHHHHHHHHHHHHHcCCeEEEeCCCcccccCcccCCCCCcCCEEEEEhhHcCCcEEEC-CCCeEEEeCCCcHH
Confidence 46789999999998877542 2 344589999832 22111 12346899998866665565 45679999999999
Q ss_pred HHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccC
Q 000657 344 ELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 393 (1370)
Q Consensus 344 ~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~as 393 (1370)
+|.+.+++.-...++ .++|.+|- +||||||++.+
T Consensus 119 ~LeeaLk~~Gl~p~s--------------d~GSS~IG--asIGGnIAtNA 152 (564)
T PRK11183 119 QLEKALKPLGREPHS--------------VIGSSCIG--ASVIGGICNNS 152 (564)
T ss_pred HHHHHHHHhCCCCCC--------------cccccccC--CCCccceEECC
Confidence 999988654221110 12333333 39999999764
|
|
| >TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.086 Score=65.02 Aligned_cols=102 Identities=16% Similarity=0.196 Sum_probs=67.6
Q ss_pred ceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHH
Q 000657 271 LKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 346 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~ 346 (1370)
...++|+|.+|+.++++.. . ..++++||++..-. .....++||++++..+..|..+...++++|++++.+|.
T Consensus 16 ~~v~~P~s~eev~~iv~~A~~~~~~v~v~G~GhS~s~~----~~~~gvvIdl~~l~~i~~id~~~~~vtV~aG~~l~~L~ 91 (438)
T TIGR01678 16 EVYYQPTSVEEVREVLALAREQKKKVKVVGGGHSPSDI----ACTDGFLIHLDKMNKVLQFDKEKKQITVEAGIRLYQLH 91 (438)
T ss_pred CEEEecCCHHHHHHHHHHHHHCCCeEEEECCCCCCCCC----ccCCeEEEEhhhcCCceEEcCCCCEEEEcCCCCHHHHH
Confidence 4689999999999888653 2 36778888554221 11236899998865554455555689999999999999
Q ss_pred HHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCC
Q 000657 347 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP 394 (1370)
Q Consensus 347 ~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp 394 (1370)
+.|.+.--. +....=-+..||||.|.++..
T Consensus 92 ~~L~~~Gl~------------------l~~~g~~~~~TvGG~iatg~h 121 (438)
T TIGR01678 92 EQLDEHGYS------------------MSNLGSISEVSVAGIISTGTH 121 (438)
T ss_pred HHHHHcCCE------------------ecCCCCCCCceeeehhcCCCC
Confidence 887542110 111111245899998877644
|
This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1. |
| >PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.22 Score=58.85 Aligned_cols=153 Identities=16% Similarity=0.159 Sum_probs=101.5
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhCC----CcEEEeccCcceeeeeecccccceEEecCCcccccceee---cCC--
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKYP----DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNV---KDD-- 332 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~~----~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~---~~~-- 332 (1370)
++.+++ .-..|+.|+|.+|+.++++... ...+|.||+-+.+.- + .+.++|.+ + |+.++. +++
T Consensus 14 t~riGG-~A~~~~~p~~~~el~~~~~~~~~~~~p~~vlG~GSNlLv~D--~--~~g~vI~~-~---~~~~~~~~~~~~~~ 84 (334)
T PRK00046 14 TFGIDA-RARHLVEAESEEQLLEALADARAAGLPVLVLGGGSNVLFTE--D--FDGTVLLN-R---IKGIEVLSEDDDAW 84 (334)
T ss_pred eeccCc-EEeEEEeeCCHHHHHHHHHHHHHcCCCEEEEeceEEEEECC--C--CCEEEEEe-c---CCceEEEecCCCeE
Confidence 455666 4567889999999999886432 367899999998842 2 34666765 3 444444 333
Q ss_pred cEEEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCC----CCChhHHHHhcCC
Q 000657 333 GLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASP----ISDLNPLWMASGA 407 (1370)
Q Consensus 333 ~l~IGA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp----~sD~~p~L~al~A 407 (1370)
.+++||++.+.+|.....+. .+ .-++..++.+ ||+||-++ ||.- ++|.. -
T Consensus 85 ~v~a~AG~~~~~l~~~~~~~--gl------------~GlE~l~gIP----GTVGGAv~mNaGayG~ei~d~l-------~ 139 (334)
T PRK00046 85 YLHVGAGENWHDLVLWTLQQ--GM------------PGLENLALIP----GTVGAAPIQNIGAYGVELKDVC-------D 139 (334)
T ss_pred EEEEEcCCcHHHHHHHHHHc--Cc------------hhhHHhcCCC----cchhHHHHhcCCcCcccHheeE-------E
Confidence 69999999999999875431 11 1234444444 78888773 4432 34443 2
Q ss_pred EEEEEeCC-CCeEEEehhHhhcccccccCCCC----eEEEEEEccC
Q 000657 408 KFHIVDCK-GNIRTTMAEEFFLGYRKVDLTSG----EILLSIFLPW 448 (1370)
Q Consensus 408 ~v~i~s~~-g~~R~vpl~dF~~g~~~~~L~~~----Eil~~I~iP~ 448 (1370)
+|++...+ |..+++.-+|..-+||.+.++.+ .||+++.+.+
T Consensus 140 ~V~v~d~~~g~~~~~~~~e~~f~YR~S~f~~~~~~~~iVl~a~f~L 185 (334)
T PRK00046 140 YVEALDLATGEFVRLSAAECRFGYRDSIFKHEYPDRYAITAVGFRL 185 (334)
T ss_pred EEEEEECCCCcEEEEEHHHcCcccccccCCCCCcCCEEEEEEEEEe
Confidence 46666654 66889999998889998888753 4677666554
|
|
| >PLN02465 L-galactono-1,4-lactone dehydrogenase | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.26 Score=62.25 Aligned_cols=156 Identities=11% Similarity=0.123 Sum_probs=87.0
Q ss_pred CceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHH
Q 000657 270 GLKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1370)
Q Consensus 270 ~~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1370)
...+++|+|.+|+.++++.. + ..+++++|.+..-.. .....+||++++..+-.|..+...++++|++++.+|
T Consensus 97 p~~vv~P~S~eEV~~iV~~A~~~g~~VrvvGsGhS~~~l~----~td~glIdL~~l~~Il~vD~e~~~VtV~AG~~l~~L 172 (573)
T PLN02465 97 TRRYHQPESLEELEDIVKEAHEKGRRIRPVGSGLSPNGLA----FSREGMVNLALMDKVLEVDKEKKRVTVQAGARVQQV 172 (573)
T ss_pred CCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCee----eCCCEEEECcCCCCcEEEeCCCCEEEEccCCCHHHH
Confidence 34689999999999988753 2 467888887432111 122357898875544444445568999999999999
Q ss_pred HHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCCh-hHHHHhcCCEEEEEeCCCCeEEEehh
Q 000657 346 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDL-NPLWMASGAKFHIVDCKGNIRTTMAE 424 (1370)
Q Consensus 346 ~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~-~p~L~al~A~v~i~s~~g~~R~vpl~ 424 (1370)
.+.|.+.--. +...++ -+..||||.|.++..-+.. .+.+-..=-.++++..+|+..++.-+
T Consensus 173 ~~~L~~~GLa---------------l~n~g~---I~~~TIGGaIstGtHGtG~~~g~i~d~V~~l~lVta~G~vv~~s~~ 234 (573)
T PLN02465 173 VEALRPHGLT---------------LQNYAS---IREQQIGGFIQVGAHGTGARIPPIDEQVVSMKLVTPAKGTIELSKE 234 (573)
T ss_pred HHHHHHcCCE---------------eccCCC---CCCeeecchhhCCCCCcCCCcCcHhheEEEEEEEECCCCEEEECCC
Confidence 9887542111 111111 1357999999776433221 11111111124455555545555432
Q ss_pred ---HhhcccccccCCCCeEEEEEEccC
Q 000657 425 ---EFFLGYRKVDLTSGEILLSIFLPW 448 (1370)
Q Consensus 425 ---dF~~g~~~~~L~~~Eil~~I~iP~ 448 (1370)
|.|.. ....|..-.||+++.|-.
T Consensus 235 ~~pdLF~a-ar~glG~lGVIteVTLql 260 (573)
T PLN02465 235 DDPELFRL-ARCGLGGLGVVAEVTLQC 260 (573)
T ss_pred CCHHHHhH-hhccCCCCcEEEEEEEEE
Confidence 23321 112232224777776654
|
|
| >PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.27 Score=58.86 Aligned_cols=154 Identities=15% Similarity=0.201 Sum_probs=96.2
Q ss_pred CCccccCCCCceEEecCCHHHHHHHHhhC----CCcEEEeccCcceeeeeecccccceEEecCCcccccceeec--CCcE
Q 000657 261 NPLNLSGFGGLKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVK--DDGL 334 (1370)
Q Consensus 261 ~~~~~~~~~~~~~~~P~sl~e~l~ll~~~----~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~--~~~l 334 (1370)
.++.+++ .-..|+.|+|.+|+.++++.. -...++.||+-+.+. . .-.+.++|+++. +.|+.+ ++.+
T Consensus 25 tt~~iGg-~A~~~~~p~s~edl~~~l~~a~~~~~p~~vlGgGSNlLv~--D-~g~~GvVI~l~~----~~i~i~~~~~~v 96 (363)
T PRK13903 25 TTLRVGG-PARRLVTCTSTEELVAAVRELDAAGEPLLVLGGGSNLVIA--D-DGFDGTVVRVAT----RGVTVDCGGGLV 96 (363)
T ss_pred cEeecCc-cceEEEEeCCHHHHHHHHHHHHHCCCCEEEEeCCeeEeEC--C-CCccEEEEEeCC----CcEEEeCCCCEE
Confidence 3455666 445688999999999887643 246789999998752 1 113467888863 555555 6789
Q ss_pred EEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCC----CCChhHHHHhcCCEE
Q 000657 335 EIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASP----ISDLNPLWMASGAKF 409 (1370)
Q Consensus 335 ~IGA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp----~sD~~p~L~al~A~v 409 (1370)
++||++++.++...+.+. .+. -|+..++. -||+||-+. |+.- ++|... .|
T Consensus 97 ~vgAG~~~~~l~~~a~~~--GL~------------GlE~laGI----PGTVGGAv~mNaGayG~ei~D~l~-------sV 151 (363)
T PRK13903 97 RAEAGAVWDDVVARTVEA--GLG------------GLECLSGI----PGSAGATPVQNVGAYGQEVSDTIT-------RV 151 (363)
T ss_pred EEEcCCCHHHHHHHHHHc--CCc------------cccccCCC----CcchhhHhhcCCChhHHHHhhhEe-------EE
Confidence 999999999999875432 111 01111222 267777764 3322 344332 34
Q ss_pred EEEeCC-CCeEEEehhHhhcccccccCCCC--eEEEEEEcc
Q 000657 410 HIVDCK-GNIRTTMAEEFFLGYRKVDLTSG--EILLSIFLP 447 (1370)
Q Consensus 410 ~i~s~~-g~~R~vpl~dF~~g~~~~~L~~~--Eil~~I~iP 447 (1370)
++...+ |..++++-+|.+-+||...++.+ .||+++.+-
T Consensus 152 ~vvd~~~G~~~~~~~~el~f~YR~S~f~~~~~~IIl~a~f~ 192 (363)
T PRK13903 152 RLLDRRTGEVRWVPAADLGFGYRTSVLKHSDRAVVLEVEFQ 192 (363)
T ss_pred EEEECCCCEEEEEEHHHcceeccccccCCCCCEEEEEEEEE
Confidence 555533 65788888898888988777642 355555443
|
|
| >PTZ00490 Ferredoxin superfamily; Provisional | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.1 Score=54.09 Aligned_cols=85 Identities=20% Similarity=0.277 Sum_probs=57.8
Q ss_pred eEEEEEEC---CEEEEeccCCCCCcHHHHHhhCCCCccccCCC-CCCCCceEEEEcc-c-ccc-----------C-C-cc
Q 000657 19 KEAILYVN---GLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVSR-Y-DKK-----------S-K-KC 79 (1370)
Q Consensus 19 ~~i~~~~N---g~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~~-~-~~~-----------~-~-~~ 79 (1370)
.++++++| |+.++++ ++++.+|++.||+.+.-+.-.-|+ .|.||-|.|.|.. + +.. + . ..
T Consensus 34 g~v~I~~~~~dG~~~~v~-~~~G~sLLeal~~~~~i~i~~~CGG~g~CgtC~V~V~~g~~~~l~~~~~~E~~~L~~~~~~ 112 (143)
T PTZ00490 34 GKVKVCVKKRDGTHCDVE-VPVGMSLMHALRDVAKLDVEGTCNGCMQCATCHVYLSAASFKKLGGPSEEEEDVLAKALDV 112 (143)
T ss_pred CcEEEEEEcCCCCEEEEE-ECCCccHHHHHHHcCCCCccccCCCCCEeCCCEEEECCCccccCCCCChHHHHHhhccccC
Confidence 34555553 6778886 889999999999864456666788 8999999999965 1 000 0 0 11
Q ss_pred cceeecccccchhc-cCCcEEEEecc
Q 000657 80 VHCAVNACLAPLYS-LEGMHVITVEG 104 (1370)
Q Consensus 80 ~~~~v~sCl~~~~~-~~g~~i~TvEg 104 (1370)
.-..-.||.+.+.. ++|..|..-|-
T Consensus 113 ~~gsRLaCQi~v~~~ldgl~V~vp~~ 138 (143)
T PTZ00490 113 KETSRLACQVDLTPEMDGLEVELPSY 138 (143)
T ss_pred CCCcEEeeeEEEecCCCCEEEEeCcc
Confidence 22334889988865 67887775543
|
|
| >PRK11230 glycolate oxidase subunit GlcD; Provisional | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.14 Score=64.23 Aligned_cols=103 Identities=13% Similarity=0.065 Sum_probs=70.6
Q ss_pred ceEEecCCHHHHHHHHhhC--CC--cEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHH
Q 000657 271 LKWYRPLKLQHLLELKSKY--PD--SKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 346 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~--~~--a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~ 346 (1370)
...++|.|.+|+.++++.. .+ ..+.+|||++.-.. ......++||+++......|..++..++++|++++.+|.
T Consensus 57 ~~Vv~P~s~eeV~~iv~~a~~~~ipv~~rG~Gt~~~gg~--~~~~~gividl~~ln~I~~id~~~~~v~VeaGv~~~~L~ 134 (499)
T PRK11230 57 LLVVLPKQMEQVQALLAVCHRLRVPVVARGAGTGLSGGA--LPLEKGVLLVMARFNRILDINPVGRRARVQPGVRNLAIS 134 (499)
T ss_pred CEEEeeCCHHHHHHHHHHHHHcCCeEEEECCCcCcCCCc--ccCCCcEEEEcccCCCceEEcCCCCEEEEcCCccHHHHH
Confidence 3578999999998887643 12 34668888872211 111346899999966555556666789999999999999
Q ss_pred HHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccccc
Q 000657 347 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 392 (1370)
Q Consensus 347 ~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a 392 (1370)
+.|.+.--.+ -..++-...+||||||++.
T Consensus 135 ~~l~~~Gl~~-----------------~~~p~s~~~~tvGG~ia~n 163 (499)
T PRK11230 135 QAAAPHGLYY-----------------APDPSSQIACSIGGNVAEN 163 (499)
T ss_pred HHHHHcCCee-----------------CCCCCccccceEcceeccC
Confidence 9876432111 1234445679999999864
|
|
| >PLN02593 adrenodoxin-like ferredoxin protein | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.074 Score=53.41 Aligned_cols=48 Identities=19% Similarity=0.385 Sum_probs=40.8
Q ss_pred EEEE-EECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCC-CCCCceEEEE
Q 000657 20 EAIL-YVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGE-GGCGACTVMV 69 (1370)
Q Consensus 20 ~i~~-~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~-G~CGaCtV~~ 69 (1370)
+|+| ...|+..+++ +.++++|++.+++.|+. .-..|+. |.||.|-|.|
T Consensus 2 ~V~fi~~~G~~~~v~-~~~G~tLl~a~~~~gi~-i~~~CgG~g~C~tC~V~V 51 (117)
T PLN02593 2 SVTFVDKDGEERTVK-APVGMSLLEAAHENDIE-LEGACEGSLACSTCHVIV 51 (117)
T ss_pred EEEEEcCCCCEEEEE-ECCCCcHHHHHHHcCCC-CCccCCCcceeCCCEEEE
Confidence 4677 4789888886 78999999999998874 7778995 9999999999
|
|
| >TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase | Back alignment and domain information |
|---|
Probab=93.90 E-value=0.39 Score=60.84 Aligned_cols=107 Identities=14% Similarity=0.087 Sum_probs=65.2
Q ss_pred ceEEecCCHHHHHHHHhhCC----CcEEEeccC-cceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHH
Q 000657 271 LKWYRPLKLQHLLELKSKYP----DSKLLVGNT-EVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~~----~a~lvaGgT-dl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1370)
...++|+|.+|+.++++... ..++++|++ .+.-........-.++||++++..+-.|..+...++++|++++.+|
T Consensus 33 ~~vv~P~s~eeV~~iV~~A~~~g~~v~v~GG~gHs~~~~a~t~~~~ggvvIdL~~Ln~il~iD~~~~tVtV~AG~~l~~L 112 (557)
T TIGR01677 33 ANVAYPKTEAELVSVVAAATAAGRKMKVVTRYSHSIPKLACPDGSDGALLISTKRLNHVVAVDATAMTVTVESGMSLREL 112 (557)
T ss_pred CEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCcCcccccCCCCCEEEEEcccCCCCEEEeCCCCEEEECCCCcHHHH
Confidence 46899999999999887542 245554432 2211000000011389999986655555555678999999999999
Q ss_pred HHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCC
Q 000657 346 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPI 395 (1370)
Q Consensus 346 ~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~ 395 (1370)
.+.|.+.--.++ ..+.+- ..||||.|.++..-
T Consensus 113 ~~~L~~~Glal~-----------------~~~~~~-~~TVGGaiatGthG 144 (557)
T TIGR01677 113 IVEAEKAGLALP-----------------YAPYWW-GLTVGGMMGTGAHG 144 (557)
T ss_pred HHHHHHcCCEec-----------------cCCCCC-CeEeeEhhhCCCCC
Confidence 998764311111 111222 24999999876543
|
This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown. |
| >TIGR02160 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, PaaK subunit | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.088 Score=63.15 Aligned_cols=51 Identities=16% Similarity=0.268 Sum_probs=43.3
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
-.++|+..|+.+....++++++||+.|++.|+ -+..+|+.|.||+|.|-+-
T Consensus 263 ~~v~~~~~~~~~~~~~~~~~~slL~~~~~~gi-~~~~~C~~G~Cg~C~~~~~ 313 (352)
T TIGR02160 263 SKVTVTLDGRSTETSSLSRDESVLDAALRARP-DLPFACKGGVCGTCRAKVL 313 (352)
T ss_pred eEEEEEECCceEEEEecCCCCcHHHHHHHcCC-CCcCCCCCccCCCCEEEEe
Confidence 46889999998763237899999999988886 6889999999999999774
|
Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA. |
| >TIGR01679 bact_FAD_ox FAD-linked oxidoreductase | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.27 Score=60.44 Aligned_cols=155 Identities=15% Similarity=0.119 Sum_probs=90.6
Q ss_pred ceEEecCCHHHHHHHHhhCC-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHH
Q 000657 271 LKWYRPLKLQHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 349 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l 349 (1370)
...++|+|.+|+.++++... ..++++||.+..... .....+||++++..+-.+..+...++++|++++.+|.+.|
T Consensus 13 ~~v~~P~s~~ev~~~v~~a~~~v~~~G~Ghs~~~~~----~~~g~~idl~~l~~i~~~d~~~~~v~v~aG~~l~~l~~~L 88 (419)
T TIGR01679 13 SAIVRPTDEGELADVIAQAAKPVRAVGSGHSFTDLA----CTDGTMISLTGLQGVVDVDQPTGLATVEAGTRLGALGPQL 88 (419)
T ss_pred CeEECCCCHHHHHHHHHHhCCCEEEEeCCCCCCCcc----cCCCEEEEhhHcCCceeecCCCCEEEEcCCCCHHHHHHHH
Confidence 46889999999999887653 477888886654321 2235899998855444445557889999999999999887
Q ss_pred HHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCCh-hHHHHhcCCEEEEEeCCCCeEEEeh---hH
Q 000657 350 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDL-NPLWMASGAKFHIVDCKGNIRTTMA---EE 425 (1370)
Q Consensus 350 ~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp~sD~-~p~L~al~A~v~i~s~~g~~R~vpl---~d 425 (1370)
.+.--.+ + ..+ .+ +..||||.|.+...-+.. ...+-..=-.++|+..+|..+++.- .|
T Consensus 89 ~~~G~~l--------~-------~~~--~~-~~~tvGG~ia~~~hG~g~~~G~~~d~V~~l~vV~a~G~v~~~~~~~~~d 150 (419)
T TIGR01679 89 AQRGLGL--------E-------NQG--DI-DPQSIGGALGTATHGTGVRFQALHARIVSLRLVTAGGKVLDLSEGDDQD 150 (419)
T ss_pred HHcCCcc--------c-------cCC--CC-CCceeccceecCCCCCCccCCchhhhEEEEEEEcCCCCEEEEcCCCCHH
Confidence 5421111 0 111 22 347899999875432211 0111111123555666664445443 23
Q ss_pred hhcccccccCCCCeEEEEEEccC
Q 000657 426 FFLGYRKVDLTSGEILLSIFLPW 448 (1370)
Q Consensus 426 F~~g~~~~~L~~~Eil~~I~iP~ 448 (1370)
.|...+- .+..=-||+++.+-.
T Consensus 151 Lf~a~~g-~~G~lGVIt~vtl~~ 172 (419)
T TIGR01679 151 MYLAARV-SLGALGVISQVTLQT 172 (419)
T ss_pred HHHHHHh-CCCceEEEEEEEEEe
Confidence 4442211 122334777777654
|
This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. |
| >TIGR00387 glcD glycolate oxidase, subunit GlcD | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.13 Score=63.28 Aligned_cols=100 Identities=13% Similarity=0.084 Sum_probs=66.2
Q ss_pred EecCCHHHHHHHHhh---CC-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHH
Q 000657 274 YRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMF 349 (1370)
Q Consensus 274 ~~P~sl~e~l~ll~~---~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l 349 (1370)
++|+|.+|+.++++. +. ...+.+|||++.-..- .....++||+++......|..++..++++|++++.+|.+.|
T Consensus 2 v~P~s~eev~~iv~~a~~~~i~v~~~G~Gt~~~g~~~--~~~~~vvidl~~mn~i~~id~~~~~v~veaGv~~~~l~~~l 79 (413)
T TIGR00387 2 VFPKNTEQVARILKLCHEHRIPIVPRGAGTGLSGGAL--PEEGGLVLVFKHMNKILEIDVVNLTAVVQPGVRNLELEQAV 79 (413)
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcc--CCCCeEEEEhHHcCceeEEcCCCCEEEEcCCccHHHHHHHH
Confidence 469999998887763 32 3677899998742110 01246788987744433444446789999999999999987
Q ss_pred HHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccccc
Q 000657 350 RKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 392 (1370)
Q Consensus 350 ~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a 392 (1370)
.+.--.++ -.++-...+|+||+|++.
T Consensus 80 ~~~gl~~~-----------------~~p~s~~~~tiGG~ia~n 105 (413)
T TIGR00387 80 EEHNLFYP-----------------PDPSSQISSTIGGNIAEN 105 (413)
T ss_pred HHcCCeeC-----------------CCCcccccceehhhhhcC
Confidence 64321111 134445679999999864
|
This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity. |
| >PRK10684 HCP oxidoreductase, NADH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.091 Score=62.56 Aligned_cols=49 Identities=22% Similarity=0.273 Sum_probs=37.7
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
.++++++....++. ++++.+||+.|++.|+ -+..+|+.|.||.|.|-+-
T Consensus 248 ~~~v~~~~~~~~~~-~~~~~~lL~~~~~~gi-~~~~~C~~G~Cg~C~~~~~ 296 (332)
T PRK10684 248 GLTFTKLQPAREFY-APVGTTLLEALESNKV-PVVAACRAGVCGCCKTKVV 296 (332)
T ss_pred ceEEEEecCCEEEE-eCCCChHHHHHHHcCC-CccCCCCCcCCCCCEEEEe
Confidence 34444544434443 6689999999998886 7889999999999999874
|
|
| >COG0633 Fdx Ferredoxin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=92.96 E-value=0.14 Score=50.12 Aligned_cols=48 Identities=29% Similarity=0.476 Sum_probs=37.0
Q ss_pred EEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEcc
Q 000657 23 LYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 23 ~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1370)
...+|+......++.+.+||+.+.++|+. .-.+|+.|.||+|.|.|.+
T Consensus 7 v~~~~~~~~~~~~~~g~tiLe~a~~~gi~-i~~~C~~g~C~TC~v~v~~ 54 (102)
T COG0633 7 VTIDGEGDVTEAVNEGETLLEAAERNGIP-IEYACRGGACGTCRVKVLE 54 (102)
T ss_pred EeccCCcceEEeccCCcHHHHHHHHCCCc-ceecCCCCccCccEEEEec
Confidence 34455434444366689999999888887 7789999999999998864
|
|
| >PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.83 Score=52.62 Aligned_cols=152 Identities=18% Similarity=0.301 Sum_probs=96.0
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEccccc
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVR 341 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vT 341 (1370)
++.+++ .-+|+.|.|.+|+.++++ -...++.||+-+.+.- .-.+..+|.+++ .+..++.++ +.||++.
T Consensus 14 t~riGG--~A~~~~p~~~~~l~~~~~--~p~~vlG~GSNlL~~D---~g~~g~vI~l~~--~~~~~~~~~---~a~AG~~ 81 (273)
T PRK14651 14 TLGVGG--PAELWTVETHEQLAEATE--APYRVLGGGSNLLVSD---AGVPERVIRLGG--EFAEWDLDG---WVGGGVP 81 (273)
T ss_pred EeecCc--eEEEEecCCHHHHHHHHC--CCeEEEeceeEEEEcC---CCcceEEEEECC--cceeEeECC---EEECCCc
Confidence 455665 334444999999999983 3578899999987732 112356676643 255555443 7999999
Q ss_pred HHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCC-CCChhHHHHhcCCEEEEEeCCCCeE
Q 000657 342 LTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASP-ISDLNPLWMASGAKFHIVDCKGNIR 419 (1370)
Q Consensus 342 l~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp-~sD~~p~L~al~A~v~i~s~~g~~R 419 (1370)
+.+|.....+. .+. -++..++-+ ||+||-++ ||.- -.++.=.|.. |++.. +|..+
T Consensus 82 ~~~l~~~~~~~--gl~------------GlE~l~gIP----GTVGGAv~mNaGayG~ei~d~l~~----V~~~~-~g~~~ 138 (273)
T PRK14651 82 LPGLVRRAARL--GLS------------GLEGLVGIP----AQVGGAVKMNAGTRFGEMADALHT----VEIVH-DGGFH 138 (273)
T ss_pred HHHHHHHHHHC--CCc------------chhhhcCCC----cchhhHHHhhCCccccChheeEEE----EEEEE-CCCEE
Confidence 99999875431 111 223334443 78888884 4432 2333333322 33333 45589
Q ss_pred EEehhHhhcccccccCCCCeEEEEEEccC
Q 000657 420 TTMAEEFFLGYRKVDLTSGEILLSIFLPW 448 (1370)
Q Consensus 420 ~vpl~dF~~g~~~~~L~~~Eil~~I~iP~ 448 (1370)
+++-+|..-+||.+.++.+.||+++.+..
T Consensus 139 ~~~~~e~~f~YR~S~~~~~~iIl~a~f~l 167 (273)
T PRK14651 139 QYSPDELGFGYRHSGLPPGHVVTRVRLKL 167 (273)
T ss_pred EEEHHHccccccccCCCCCEEEEEEEEEE
Confidence 99999988899998887666777666554
|
|
| >PRK07609 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.1 Score=62.30 Aligned_cols=47 Identities=23% Similarity=0.446 Sum_probs=39.1
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
.|+|.-+|+.++ ++++.+||+.|++.|+. ...+|+.|.||.|.|-+-
T Consensus 4 ~v~~~~~~~~~~---~~~g~tlL~a~~~~gi~-~~~~C~~G~Cg~C~~~~~ 50 (339)
T PRK07609 4 QVTLQPSGRQFT---AEPDETILDAALRQGIH-LPYGCKNGACGSCKGRLL 50 (339)
T ss_pred EEEEecCCeEEE---eCCCCcHHHHHHHcCCC-CCCCCCCeECCCCEEEEE
Confidence 577777777654 55899999999988865 789999999999999764
|
|
| >TIGR02007 fdx_isc ferredoxin, 2Fe-2S type, ISC system | Back alignment and domain information |
|---|
Probab=92.91 E-value=0.1 Score=51.87 Aligned_cols=44 Identities=23% Similarity=0.396 Sum_probs=34.8
Q ss_pred EEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCC-CCCCCceEEEEc
Q 000657 23 LYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVS 70 (1370)
Q Consensus 23 ~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~ 70 (1370)
|.-+|+.++ +.++++||+.|++.|+. +-..|+ .|.||.|-|.|.
T Consensus 11 ~~p~~~~~~---~~~g~tLL~a~~~~gi~-i~~~CgG~G~CgtC~v~V~ 55 (110)
T TIGR02007 11 LCPEGAVVE---AKPGETILDVALDNGIE-IEHACEKSCACTTCHCIVR 55 (110)
T ss_pred cCCCCeEEE---ECCCChHHHHHHHcCCC-ccccCCCCceeCCCEEEEe
Confidence 334566554 55899999999998875 778998 699999999884
|
This family consists of proteobacterial ferredoxins associated with and essential to the ISC system of 2Fe-2S cluster assembly. This family is closely related to (but excludes) eukaryotic (mitochondrial) adrenodoxins, which are ferredoxins involved in electron transfer to P450 cytochromes. |
| >COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=92.81 E-value=1.2 Score=51.34 Aligned_cols=155 Identities=23% Similarity=0.330 Sum_probs=100.5
Q ss_pred ccccCCCCceEEecCCHHHHHHHHhhCC----CcEEEeccCcceeeeeecccccceEEecCCcccccceee--cCCcEEE
Q 000657 263 LNLSGFGGLKWYRPLKLQHLLELKSKYP----DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNV--KDDGLEI 336 (1370)
Q Consensus 263 ~~~~~~~~~~~~~P~sl~e~l~ll~~~~----~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~--~~~~l~I 336 (1370)
..+++ .-..|+.|++.+|+.++++... ...++.||+-+.+.-.. ...++|.+.. +..+.. +++.|++
T Consensus 15 friGg-~A~~~~~~~~~e~l~~~~~~~~~~~~p~~ilG~GSNlLv~d~g---~~gvvi~~~~---~~~~~~~~~~~~i~a 87 (291)
T COG0812 15 FRIGG-PAEVLVEPRDIEELKAALKYAKAEDLPVLILGGGSNLLVRDGG---IGGVVIKLGK---LNFIEIEGDDGLIEA 87 (291)
T ss_pred EecCc-ceeEEEecCCHHHHHHHHHhhhhcCCCEEEEecCceEEEecCC---CceEEEEccc---ccceeeeccCCeEEE
Confidence 44555 5568999999999988887653 36788999988773221 2234555443 333333 3348999
Q ss_pred cccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccc-ccc----CCCCChhHHHHhcCCEEEE
Q 000657 337 GAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNI-CTA----SPISDLNPLWMASGAKFHI 411 (1370)
Q Consensus 337 GA~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl-~~a----sp~sD~~p~L~al~A~v~i 411 (1370)
||+..+.+|.....+. .++ - |+..+.-+ ||+||-+ ||+ .-++|.+. ++++
T Consensus 88 ~aG~~~~~l~~~~~~~--gl~-----G-------lE~l~gIP----GsvGgav~mNaGAyG~Ei~d~~~-------~v~~ 142 (291)
T COG0812 88 GAGAPWHDLVRFALEN--GLS-----G-------LEFLAGIP----GSVGGAVIMNAGAYGVEISDVLV-------SVEV 142 (291)
T ss_pred ccCCcHHHHHHHHHHc--CCc-----c-------hhhhcCCC----cccchhhhccCcccccchheeEE-------EEEE
Confidence 9999999998774431 111 0 11122222 5666655 333 22456553 4666
Q ss_pred EeCCCCeEEEehhHhhcccccccCCCC-eEEEEEEccCC
Q 000657 412 VDCKGNIRTTMAEEFFLGYRKVDLTSG-EILLSIFLPWT 449 (1370)
Q Consensus 412 ~s~~g~~R~vpl~dF~~g~~~~~L~~~-Eil~~I~iP~~ 449 (1370)
...+|..++++-+|.--|||...++.. -+|+++.+...
T Consensus 143 ld~~G~~~~l~~~el~f~YR~S~f~~~~~vvl~v~f~L~ 181 (291)
T COG0812 143 LDRDGEVRWLSAEELGFGYRTSPFKKEYLVVLSVEFKLT 181 (291)
T ss_pred EcCCCCEEEEEHHHhCcccccCcCCCCCEEEEEEEEEeC
Confidence 667888999999998889999999876 67777766654
|
|
| >PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.64 E-value=0.99 Score=53.65 Aligned_cols=86 Identities=17% Similarity=0.223 Sum_probs=58.2
Q ss_pred CCccccCCCCceEEecCCHHHHHHHHhhCC----CcEEEeccCcceeeeeecccccceEEecCCccccccee-ecC-CcE
Q 000657 261 NPLNLSGFGGLKWYRPLKLQHLLELKSKYP----DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLN-VKD-DGL 334 (1370)
Q Consensus 261 ~~~~~~~~~~~~~~~P~sl~e~l~ll~~~~----~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~-~~~-~~l 334 (1370)
.++.+++ .-..|+.|.|.+|+.++++... ...++.||+-+.+.- .-.+..+|.+.++.++.-.. .++ ..|
T Consensus 22 tT~rIGG-~A~~~~~p~s~~el~~~l~~~~~~~~p~~iLG~GSNlL~~D---~g~~G~VI~l~~~~~i~i~~~~~~~~~v 97 (354)
T PRK14648 22 CSFRIGG-AAQFWAEPRSCTQLRALIEEAQRARIPLSLIGGGSNVLIAD---EGVPGLMLSLRRFRSLHTQTQRDGSVLV 97 (354)
T ss_pred ceeeeCc-EEEEEEeeCCHHHHHHHHHHHHHcCCCEEEEeceeEEEEeC---CCccEEEEEeCCcCceEEeeccCCcEEE
Confidence 3455666 5567999999999999886432 367889999988732 22346778775544442111 233 359
Q ss_pred EEcccccHHHHHHHHH
Q 000657 335 EIGAAVRLTELLKMFR 350 (1370)
Q Consensus 335 ~IGA~vTl~~l~~~l~ 350 (1370)
++||++.+.+|...+.
T Consensus 98 ~agAG~~~~~Lv~~~~ 113 (354)
T PRK14648 98 HAGAGLPVAALLAFCA 113 (354)
T ss_pred EEEeCCcHHHHHHHHH
Confidence 9999999999987743
|
|
| >PRK05713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.01 E-value=0.2 Score=59.19 Aligned_cols=45 Identities=31% Similarity=0.443 Sum_probs=37.3
Q ss_pred EEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCCCCCCCCceEEEEc
Q 000657 22 ILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 22 ~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
+|+.||+.+++ .++.|||+.+++.|+. ...+|+.|.||.|.|.+-
T Consensus 3 ~~~~~~~~~~~---~~g~tlL~a~~~~gi~-~~~~C~~G~Cg~C~~~~~ 47 (312)
T PRK05713 3 ELRVGERRWSV---PAGSNLLDALNAAGVA-VPYSCRAGSCHACLVRCL 47 (312)
T ss_pred cEecCCeEEEE---CCCCcHHHHHHHcCCC-CCcCCCCcCCCCCeEEEE
Confidence 57899987665 5899999999987753 457899999999999884
|
|
| >PRK05464 Na(+)-translocating NADH-quinone reductase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.18 Score=61.74 Aligned_cols=52 Identities=31% Similarity=0.481 Sum_probs=42.3
Q ss_pred cceEEEEEECCE-EEEeccCCCCCcHHHHHhhCCCCccccCCCC-CCCCceEEEEc
Q 000657 17 WTKEAILYVNGL-RKVLPDGLAHLTLLEYLRDIGLTGTKLGCGE-GGCGACTVMVS 70 (1370)
Q Consensus 17 ~~~~i~~~~Ng~-~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~-G~CGaCtV~~~ 70 (1370)
.+.++++++||. ..+++ +.++++||+.|+..|+. ....|+. |.||.|.|-+.
T Consensus 32 ~~~~~~i~~~~~~~~~~~-~~~g~tLL~a~~~~gi~-i~~~C~g~G~CgtC~v~v~ 85 (409)
T PRK05464 32 PSGDVTIKINGDPEKTIT-VPAGGKLLGALASNGIF-LSSACGGGGSCGQCRVKVK 85 (409)
T ss_pred cCccEEEEEcCCCcEEEE-ECCCchHHHHHHHcCCC-cccCCCCccEeCCCEEEEe
Confidence 467888999983 34554 67999999999988875 6678995 99999999874
|
|
| >PLN02805 D-lactate dehydrogenase [cytochrome] | Back alignment and domain information |
|---|
Probab=91.60 E-value=0.39 Score=60.90 Aligned_cols=101 Identities=15% Similarity=0.077 Sum_probs=69.6
Q ss_pred ceEEecCCHHHHHHHHhhC---C-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHH
Q 000657 271 LKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 346 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~---~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~ 346 (1370)
...++|+|.+|+.++++.. . ...+.+|||++.-..- .....++||+++...+..|..++..++++|++++.+|.
T Consensus 135 ~~Vv~P~s~eeV~~ivk~a~~~~ipv~prGgGts~~G~~~--~~~ggivIdl~~mn~I~~id~~~~~vtVeaGv~~~~L~ 212 (555)
T PLN02805 135 DVVVFPRSEEEVSKIVKSCNKYKVPIVPYGGATSIEGHTL--APHGGVCIDMSLMKSVKALHVEDMDVVVEPGIGWLELN 212 (555)
T ss_pred CEEEEcCCHHHHHHHHHHHHHCCCcEEEECCCCCCCCCcc--CCCCEEEEEccCCCCeEEEeCCCCEEEEeCCcCHHHHH
Confidence 3578899999988877643 2 3567789998842110 01236899998876666666677889999999999999
Q ss_pred HHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccccc
Q 000657 347 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 392 (1370)
Q Consensus 347 ~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a 392 (1370)
+.|++.--.++ . .+. ..+||||+|++.
T Consensus 213 ~~L~~~Gl~~p--------~---------~p~--~~~TIGG~ia~n 239 (555)
T PLN02805 213 EYLEPYGLFFP--------L---------DPG--PGATIGGMCATR 239 (555)
T ss_pred HHHHHcCCEeC--------C---------CCc--cccChhhHhhCC
Confidence 98765322211 0 111 347999999865
|
|
| >TIGR01941 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit | Back alignment and domain information |
|---|
Probab=91.14 E-value=0.24 Score=60.68 Aligned_cols=50 Identities=30% Similarity=0.462 Sum_probs=40.3
Q ss_pred eEEEEEECC-EEEEeccCCCCCcHHHHHhhCCCCccccCCCC-CCCCceEEEEc
Q 000657 19 KEAILYVNG-LRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGE-GGCGACTVMVS 70 (1370)
Q Consensus 19 ~~i~~~~Ng-~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC~~-G~CGaCtV~~~ 70 (1370)
..|++++|| +..+++ +.++++||+.+++.|+. ....|+. |.||.|.|.+.
T Consensus 30 ~~v~v~~~~~~~~~~~-~~~g~tlL~a~~~~gi~-i~~~C~g~G~Cg~C~v~v~ 81 (405)
T TIGR01941 30 GDITIGINDDEEKSIT-VPAGGKLLNTLASNGIF-ISSACGGGGTCGQCRVRVV 81 (405)
T ss_pred ccEEEEEcCCCceEEE-ECCCChHHHHHHHcCCC-CcccCCCccEeCCCEEEEc
Confidence 458899985 444554 67899999999988875 6788995 89999999885
|
This model represents the NqrF subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump. |
| >COG3383 Uncharacterized anaerobic dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.02 E-value=0.59 Score=58.92 Aligned_cols=94 Identities=20% Similarity=0.327 Sum_probs=71.9
Q ss_pred eEEEEEECCEEEEeccCCCCCcHHHHHhhCCCC-----ccccCCCCCCCCceEEEEccccccCCcccceeecccccchhc
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLT-----GTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYS 93 (1370)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~-----g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~ 93 (1370)
..|+++|||+.+++ ++++|+|++|.+.|+- -.+.-=.-|.|-.|.|-+|| +.+.||-+++
T Consensus 4 ~~i~vtidg~~~~v---~~G~tiL~a~~~~gI~iP~iCy~~~l~pi~sCd~ClVEidG----------~l~rsCsT~v-- 68 (978)
T COG3383 4 KMITVTIDGRSIEV---EEGTTILRAANRNGIEIPHICYHESLGPIGSCDTCLVEIDG----------KLVRSCSTPV-- 68 (978)
T ss_pred eeEEEEECCeEEec---CCChHHHHHHHhcCCcccceeccCCCCcccccceEEEEecC----------ceeccccccc--
Confidence 46899999998865 4899999999875544 33444456899999999996 6899999997
Q ss_pred cCCcEEEEeccccCCCCCCCHH----HHHHHHcCCCCCCCCChH
Q 000657 94 LEGMHVITVEGVGNRKHGLHPI----QESLVRSHGSQCGFCTPG 133 (1370)
Q Consensus 94 ~~g~~i~TvEgl~~~~~~~~~i----q~a~~~~~~~qCG~CtpG 133 (1370)
.+|+.|.|-. +.+..+ -+.+...|-.-|--|--+
T Consensus 69 ~dGm~v~t~s------~rvk~~r~~~md~~l~nH~LyC~vCd~n 106 (978)
T COG3383 69 EDGMVVRTNS------ERVKEARREAMDRILSNHPLYCTVCDNN 106 (978)
T ss_pred cCCcEEeccc------HHHHHHHHHHHHHHHhcCCcCccccCCC
Confidence 4899999843 233334 456778899999888766
|
|
| >COG1034 NuoG NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=89.49 E-value=0.72 Score=59.32 Aligned_cols=95 Identities=24% Similarity=0.426 Sum_probs=69.9
Q ss_pred EEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccc----cCCC-CCCCCceEEEEccccccCCcccceeecccccchhcc
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTK----LGCG-EGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL 94 (1370)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k----~gC~-~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~ 94 (1370)
+++++|||++++++ .+.|||+..|+.|+.=.. .+|+ -|.|.-|.|-+++.. +++.||.+|+ -
T Consensus 1 m~tI~IDG~ei~v~---~g~tvLqAa~~aGi~IP~fCyh~~ls~~GaCRmClVEveg~~--------k~~~SC~tpv--~ 67 (693)
T COG1034 1 MVTITIDGKEIEVP---EGETVLQAAREAGIDIPTFCYHPRLSIAGACRMCLVEVEGAP--------KLVASCATPV--T 67 (693)
T ss_pred CeEEEECCEEEecC---CCcHHHHHHHHcCCCCCcccccCCCCcccceeEEEEEecCCC--------cccccccccc--C
Confidence 36799999998764 788999999987654332 3455 599999999998622 6899999964 4
Q ss_pred CCcEEEEeccccCCCCC----CCHHHHHHHHcCCCCCCCCChH
Q 000657 95 EGMHVITVEGVGNRKHG----LHPIQESLVRSHGSQCGFCTPG 133 (1370)
Q Consensus 95 ~g~~i~TvEgl~~~~~~----~~~iq~a~~~~~~~qCG~CtpG 133 (1370)
+|+.|-| +.+. -+-|-+.+.-+|-.=|+-|--|
T Consensus 68 dGM~I~T------~s~~vk~~R~~vmE~LLiNHPlDCpiCD~g 104 (693)
T COG1034 68 DGMVIST------NSEEVKKAREGVMEFLLINHPLDCPVCDKG 104 (693)
T ss_pred CCeEEec------CCHHHHHHHHHHHHHHHhcCCCCCCccCCC
Confidence 8988765 2222 2456667777888888888654
|
|
| >PRK09970 xanthine dehydrogenase subunit XdhA; Provisional | Back alignment and domain information |
|---|
Probab=88.95 E-value=13 Score=49.43 Aligned_cols=191 Identities=14% Similarity=0.130 Sum_probs=111.1
Q ss_pred CCCCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEe-------cccCCCCCCCCccchHHHH
Q 000657 781 YLEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKT-------KRIGGGFGGKETRSAFIAA 848 (1370)
Q Consensus 781 ~mEp~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~-------~~vGGgFGgK~~~~~~~~~ 848 (1370)
.++...+....+ .||.++|++++.-. ..+...+|+.||+|.++|+|+. ++-+|.||++.+...-.++
T Consensus 457 ~~~~~~a~v~i~-~dGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi~~~~V~v~~~~dT~~~p~~~gt~aSr~t~~~g~Av 535 (759)
T PRK09970 457 GLEIAGARLLMN-QDGTVQVQSGATEIGQGSDTVFSQMVAETVGIPVSDVRVISTQDTDVTPFDPGAYASRQSYVAGPAI 535 (759)
T ss_pred CCCcceEEEEEc-cCceEEEEECCCCcCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCCCchhhhHHHHHHHH
Confidence 366778888887 58999999998544 5667899999999999999983 4667888888663222111
Q ss_pred HH----------HHHHHcCCCCE---EE-----E--------eChHHHHhhc-C--------------------CCccEE
Q 000657 849 AA----------AVPSFLLNRPV---NL-----T--------LDRDIDMMIS-G--------------------QRHSFL 881 (1370)
Q Consensus 849 ~a----------AlaA~~~gRPV---kl-----~--------~sR~E~~~~~-~--------------------~R~~~~ 881 (1370)
.- .++|..++-++ .+ . .+-. ++... . .-.-.-
T Consensus 536 ~~Aa~~lr~~l~~~aa~~l~~~~~~l~~~~G~v~~~~~~~~~~~~~-~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a 614 (759)
T PRK09970 536 RKAALELKEKILAHAAVMLHQSAMNLDIIDGHIVVKRPGEPLMSLE-ELAMDAYYHPERGGQITAESSIKTTTNPPAFGC 614 (759)
T ss_pred HHHHHHHHHHHHHHHHHHhCCChHHEEEECCEEEECCCCCccccHH-HHHHHhhccccCCCceeEEEEecCCCCCCceEE
Confidence 11 01233333222 01 0 0000 01100 0 011233
Q ss_pred EEEEEeeC-CCCcEEEEEEEEEecCCCCCCchH--HHHH----HHhhc-------c-----------CCCcccCeE----
Q 000657 882 GKYKVGFT-NEGKVLALDLEIYNNAGNSLDLSL--AVLE----RAMFH-------S-----------DNVYEIPNV---- 932 (1370)
Q Consensus 882 ~~~k~g~~-~dG~i~a~~~~~~~d~Ga~~~~~~--~v~~----~~~~~-------~-----------~~~Y~ipn~---- 932 (1370)
.-.++-+| ..|++.=+++....|+|-..+... +.+. +++.. . ..-|.+|..
T Consensus 615 ~~aeVeVD~~TG~v~v~~~~~~~D~G~~iNP~~v~gQi~Gg~~qGiG~aL~E~~~~d~~~G~~~~~~~~dY~ip~~~d~P 694 (759)
T PRK09970 615 TFVDVEVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDEKTGVVRNPNLLDYKLPTMMDLP 694 (759)
T ss_pred EEEEEEEeCCCCeEEEEEEEEEEEcCcccCHHHHHHHHHhHHHHHHHHHhcceeEEcCCCCeECCCChhhccCCCcccCC
Confidence 44556777 579999999999999997655210 0010 11100 0 112444332
Q ss_pred EEEEEEEeCCCCCCCc--cCCCChhhhHHHHHHHHHHHHHHhCC
Q 000657 933 RIMGNVCFTNFPSNTA--FRGFGGPQGMLITENWIQRVAVEVRK 974 (1370)
Q Consensus 933 r~~~~~v~TN~~p~ga--~Rg~G~~q~~fa~E~~mDelA~~lg~ 974 (1370)
.++...+.++.++ +. -+|.|.+...-+.=.+.+.+++.+|.
T Consensus 695 ~i~v~~ve~~~~~-~p~GaKgvGE~~~~~~~~AIanAi~~A~G~ 737 (759)
T PRK09970 695 QLESAFVEIYEPQ-SAYGHKSLGEPPIISPAPAIRNAVLMATGV 737 (759)
T ss_pred CeEEEEEecCCCC-CCCCCcccCCCcccchHHHHHHHHHHhhCC
Confidence 3555666676543 44 67788887776666777777878875
|
|
| >PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional | Back alignment and domain information |
|---|
Probab=87.96 E-value=1.3 Score=52.98 Aligned_cols=93 Identities=11% Similarity=0.061 Sum_probs=58.5
Q ss_pred HHHHHHHhhCC-CcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEcccccHHHHHHHHHHhhhcCCC
Q 000657 280 QHLLELKSKYP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPA 358 (1370)
Q Consensus 280 ~e~l~ll~~~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~i~~~~~ 358 (1370)
.++++...++. ..++.+|||....-. .....+||++++.....+..++..++++|++++.+|.+.|.+.-..++
T Consensus 8 ~~~v~~A~~~~~~v~~~GgGt~~~~g~----~~~~~vldl~~ln~Ile~d~~~~~vtV~AG~~l~el~~~L~~~G~~lp- 82 (352)
T PRK11282 8 LERVRQAAADGTPLRIRGGGSKDFYGR----ALAGEVLDTRAHRGIVSYDPTELVITARAGTPLAELEAALAEAGQMLP- 82 (352)
T ss_pred HHHHHHHHHCCCeEEEECCCCCCCCCC----CCCCeEEEcccCCCcEEEcCCCCEEEECCCCCHHHHHHHHHHcCCeeC-
Confidence 34444444443 367888887532211 112458999987666566667788999999999999998765322211
Q ss_pred CccchHHHHHHHHHHhcccccccccccccccccc
Q 000657 359 HETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 392 (1370)
Q Consensus 359 ~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~a 392 (1370)
+--+.....+||||+|++.
T Consensus 83 ---------------~~p~~~~~~~TIGG~iatg 101 (352)
T PRK11282 83 ---------------FEPPHFGGGATLGGMVAAG 101 (352)
T ss_pred ---------------CCCCCcCCCcEehhHHhcC
Confidence 1111233358999999875
|
|
| >TIGR03194 4hydrxCoA_A 4-hydroxybenzoyl-CoA reductase, alpha subunit | Back alignment and domain information |
|---|
Probab=86.83 E-value=10 Score=50.20 Aligned_cols=59 Identities=10% Similarity=0.179 Sum_probs=46.5
Q ss_pred CCCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEecc------cCCCCCCCCc
Q 000657 782 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTKR------IGGGFGGKET 841 (1370)
Q Consensus 782 mEp~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~~------vGGgFGgK~~ 841 (1370)
..+..+....+ .||.++|+++++.. ..++..+|+.||+|.++|+|.... -+|.+|++.+
T Consensus 442 ~~~~~a~v~l~-~dG~v~v~~g~~e~GqG~~T~~~qiaAe~LGip~d~V~v~~~DT~~~p~~~gt~~Sr~t 511 (746)
T TIGR03194 442 EPHATVALKLD-FDGGITLLTGAADIGQGSSTIASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVT 511 (746)
T ss_pred CCCceEEEEEc-CCccEEEEEcCCCCCCCHHHHHHHHHHHHhCCCHHhEEEEccCCCCCCCCCCChhHhHH
Confidence 34567777776 58899999988655 566889999999999999998654 5677777765
|
This model represents the largest chain, alpha, of the enzyme 4-hydroxybenzoyl-CoA reductase. In species capable of degrading various aromatic compounds by way of benzoyl-CoA, this enzyme can convert 4-hydroxybenzoyl-CoA to benzoyl-CoA. |
| >KOG2282 consensus NADH-ubiquinone oxidoreductase, NDUFS1/75 kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=86.27 E-value=1.2 Score=53.74 Aligned_cols=101 Identities=22% Similarity=0.409 Sum_probs=75.8
Q ss_pred ceEEEEEECCEEEEeccCCCCCcHHHHHhhCCCCccccCC-----CCCCCCceEEEEccccccCCcccceeecccccchh
Q 000657 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGC-----GEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLY 92 (1370)
Q Consensus 18 ~~~i~~~~Ng~~~~~~~~~~~~~L~~~LR~~~l~g~k~gC-----~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~ 92 (1370)
.+.|..+|+|+.+.+ +|++|+|..--..|..-.+.-- -.|.|--|.|.|.+.. ++|.||-||+
T Consensus 30 ~~~ievfvd~~~v~v---~pg~tvlqac~~~gv~iprfcyh~rlsvagncrmclveveksp--------kpva~campv- 97 (708)
T KOG2282|consen 30 PNKIEVFVDDQSVMV---EPGTTVLQACAKVGVDIPRFCYHERLSVAGNCRMCLVEVEKSP--------KPVAACAMPV- 97 (708)
T ss_pred ccceEEEECCeeEee---CCCcHHHHHHHHhCCCcchhhhhhhhhhccceeEEEEEeccCC--------Ccchhhcccc-
Confidence 478999999998875 4999999876433544333321 2489999999998632 7899999996
Q ss_pred ccCCcEEEEeccccCCCCCCCHHHHHHHHcCCCCCCCCChH
Q 000657 93 SLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPG 133 (1370)
Q Consensus 93 ~~~g~~i~TvEgl~~~~~~~~~iq~a~~~~~~~qCG~CtpG 133 (1370)
+.|+.|.|=--+. +..-.-+-+-|.-+|-.-|.-|.-|
T Consensus 98 -m~g~~iktns~~~--kkaregvmefll~nhpldcpicdqg 135 (708)
T KOG2282|consen 98 -MKGWKIKTNSDKS--KKAREGVMEFLLMNHPLDCPICDQG 135 (708)
T ss_pred -cCCceeecCchHH--HHHHHHHHHHHHhCCCCCCCccCCC
Confidence 6899999865554 2233557888889999999999776
|
|
| >TIGR03313 Se_sel_red_Mo probable selenate reductase, molybdenum-binding subunit | Back alignment and domain information |
|---|
Probab=86.16 E-value=16 Score=49.68 Aligned_cols=191 Identities=13% Similarity=0.042 Sum_probs=110.0
Q ss_pred CCCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEec------ccCCCCCCCCccchHHHHHH
Q 000657 782 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTK------RIGGGFGGKETRSAFIAAAA 850 (1370)
Q Consensus 782 mEp~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~------~vGGgFGgK~~~~~~~~~~a 850 (1370)
+++..+....+ .||.++|+++++.. ..+...+|+.||+|.++|+|+.. +-+|.||++.+...--++..
T Consensus 658 ~~~~~a~v~l~-~dG~v~v~~g~~e~GqG~~T~~~QiaAe~LGvp~d~V~v~~~DT~~~p~~~gt~aSr~t~~~G~Av~~ 736 (951)
T TIGR03313 658 IDQANCMIKLE-SDGTFIVHSGGADIGTGLDTVVSKLTAEVLHCPMDDVHVISGDTDHALFDKGAYASSGTCFSGNAAKR 736 (951)
T ss_pred CCCccEEEEEc-CCceEEEEECCCCCCccHHHHHHHHHHHHHCCCHHhEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 45667777776 58999999999855 66788999999999999999864 44788888866322211111
Q ss_pred ----------HHHHHcCCCCE---EEE-----------eChHHH------------HhhcC-CCc------cEEEEEEEe
Q 000657 851 ----------AVPSFLLNRPV---NLT-----------LDRDID------------MMISG-QRH------SFLGKYKVG 887 (1370)
Q Consensus 851 ----------AlaA~~~gRPV---kl~-----------~sR~E~------------~~~~~-~R~------~~~~~~k~g 887 (1370)
.++|..++.|. .+. ++-.+- ....+ +++ -...-.++-
T Consensus 737 Aa~~l~~kl~~~aa~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aeVe 816 (951)
T TIGR03313 737 AAENLREKILFHGAEMLGEPVADVDLAAPGLVRGKTGEVSYFDIAHKAETGTGFGQLVGTGSYITSEFAFPYGANFAEVA 816 (951)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHEEEecCCEEeCCCCcccHHHHHHHHhccCCCCCeEEEEEecCCCCCccceeEEEEEE
Confidence 11233333222 111 011110 00001 011 122345677
Q ss_pred eCC-CCcEEEEEEEEEecCCCCCCchH--HHHH----HHhh-----------------ccCCCcccCeE-----EEEEEE
Q 000657 888 FTN-EGKVLALDLEIYNNAGNSLDLSL--AVLE----RAMF-----------------HSDNVYEIPNV-----RIMGNV 938 (1370)
Q Consensus 888 ~~~-dG~i~a~~~~~~~d~Ga~~~~~~--~v~~----~~~~-----------------~~~~~Y~ipn~-----r~~~~~ 938 (1370)
+|. .|++.=+++....|+|-..+... +.+. +++. ....-|.+|.. .++...
T Consensus 817 VD~~TG~vkv~r~~~~~D~G~~INP~~v~gQieGg~~qGiG~AL~Ee~~~d~~G~~~~~~l~~Y~iPt~~D~P~~~~v~~ 896 (951)
T TIGR03313 817 VNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATMRAIGHSMTEEIVYDDNGIPLTRDLKSYGAPKIGDIPRDFRAVL 896 (951)
T ss_pred EECCCCcEEEEEEEEEEECCcccCHHHHHHHHHHHHHHHHHHHHhCCcEECCCCcCCCCChhhCCCCChHhCCCceEEEE
Confidence 775 59999999999999997654210 0010 0110 01123544432 255556
Q ss_pred EeCCCCCCCc--cCCCChhhhHHHHHHHHHHHHHHhCC
Q 000657 939 CFTNFPSNTA--FRGFGGPQGMLITENWIQRVAVEVRK 974 (1370)
Q Consensus 939 v~TN~~p~ga--~Rg~G~~q~~fa~E~~mDelA~~lg~ 974 (1370)
+.++.+ .++ -+|.|.+...-+.=.+.+.+++.+|.
T Consensus 897 ve~~~~-~~p~GaKGiGE~~~~~~apAIanAI~dA~G~ 933 (951)
T TIGR03313 897 VPSDDK-VGPYGAKSISEIGVNGAAPAIATAIHDACGV 933 (951)
T ss_pred EcCCCC-CCCCCCcccCCCcccchHHHHHHHHHHHhCc
Confidence 666644 444 45788877776666777777777774
|
Our comparative genomics suggests this protein family to be a subunit of a selenium-dependent molybdenum hydroxylase, although the substrate is not specified. This protein is suggested by Bebien, et al., to be the molybdenum-binding subunit of a molydbopterin-containing selenate reductase. Xi, et al, however, show that mutation of this gene in E. coli conferred sensitivity to adenine, suggesting a defect in purine interconversion. This finding, plus homology of nearby genes in a 23-gene purine catabolism region in E. coli to xanthine dehydrogase subunits suggests xanthine dehydrogenase activity. |
| >TIGR03311 Se_dep_Molyb_1 selenium-dependent molybdenum hydroxylase 1 | Back alignment and domain information |
|---|
Probab=85.71 E-value=9.8 Score=51.12 Aligned_cols=183 Identities=14% Similarity=0.097 Sum_probs=100.9
Q ss_pred CCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCCcEEEEec------ccCCCCCCCCccchHHHHHHHH
Q 000657 784 PHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTK------RIGGGFGGKETRSAFIAAAAAV 852 (1370)
Q Consensus 784 p~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kVrV~~~------~vGGgFGgK~~~~~~~~~~aAl 852 (1370)
+..++.... ||.++|+++++.. ..+...+|+.||+|.++|+|... +-+|.+|++.+... ..++-.
T Consensus 594 ~~~~~~~~~--DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~gt~aSR~t~~~--G~Av~~ 669 (848)
T TIGR03311 594 TGRCNLAVE--DGKVHIRTSAACIGQGLGTVLTQIVCETTGLPPEVIVCELPDTALTPDSGTTTASRQSLFT--GEATRR 669 (848)
T ss_pred cceEEEEEc--CCEEEEEECCCCcCcCHHHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCchhhHHHHH--HHHHHH
Confidence 345566554 7899999998665 45678889999999999999864 45777888866322 222222
Q ss_pred HHHcCCCCE------EE----EeCh----HHHHhhcC-CCcc-E---EEEEEEeeCCCCcEEEEEEEEEecCCCCCCchH
Q 000657 853 PSFLLNRPV------NL----TLDR----DIDMMISG-QRHS-F---LGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSL 913 (1370)
Q Consensus 853 aA~~~gRPV------kl----~~sR----~E~~~~~~-~R~~-~---~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~~~ 913 (1370)
+|.++++=+ .+ .... .+.+...+ ...+ + ..-.-+-++..|+|+ ++....|.|-..+...
T Consensus 670 Aa~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVd~tG~v~--r~~~v~D~G~vINP~~ 747 (848)
T TIGR03311 670 AAAKLKEALRGRTLAELEGEEFYGEYHSITDPLNSDKENPVSHVGYGYATQVVILDDAGKVE--KVVAAYDVGRAINPLN 747 (848)
T ss_pred HHHHHHHHHHhcCHHHcCCCEEeeccccccCcceeeccCCCCccccceEEEEEEECCCCeEE--EEEEEEeCCccCCHHH
Confidence 333332110 00 0000 00011101 0101 0 111122346789877 8888899997654211
Q ss_pred --HHHH----HHhh---------------------ccCCCcccCeEEEEEEEEeCCCCCCCc--cCCCChhhhHHHHHHH
Q 000657 914 --AVLE----RAMF---------------------HSDNVYEIPNVRIMGNVCFTNFPSNTA--FRGFGGPQGMLITENW 964 (1370)
Q Consensus 914 --~v~~----~~~~---------------------~~~~~Y~ipn~r~~~~~v~TN~~p~ga--~Rg~G~~q~~fa~E~~ 964 (1370)
+.+. +++. .++..-++|.+++ ..+.++.+ .++ .+|.|.+...-+.=.+
T Consensus 748 veGQieGG~~qGlG~AL~Ee~~~d~G~~~~~~~dY~iPt~~D~P~i~v--~~ve~~~~-~~p~GaKGvGE~~~~~~~~AI 824 (848)
T TIGR03311 748 LEGQIEGGIVMGLGYALTEDFPLREGIPTAKFGTLGLFRSTQVPEIET--HLIEKNGT-PLAYGAKGVGELATIPTAPAV 824 (848)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEecCCeecCChhhccCCChhhCCCeEE--EEEeCCCC-CCCCCCccCCCCcccchHHHH
Confidence 0111 0110 1112236665544 45555533 343 5788888888888888
Q ss_pred HHHHHHHhCCC
Q 000657 965 IQRVAVEVRKS 975 (1370)
Q Consensus 965 mDelA~~lg~D 975 (1370)
.+.+++.+|.-
T Consensus 825 anAV~~A~G~r 835 (848)
T TIGR03311 825 AGAYYRFDGKF 835 (848)
T ss_pred HHHHHHhHCcC
Confidence 88899999864
|
Members of this protein family show full length homology to the molybdenum-containing aldehyde oxido-reductase of Desulfovibrio gigas. Members, however, are found only within species that have, and near those genes that encode, a set of predicted accessory proteins for selenium-dependent molybdenum hydroxylases. The best known examples of such enzymes are forms of xanthine dehydrogenase and purine hydroxylase; this family appears to be another such enzyme. |
| >PRK13904 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
Probab=84.85 E-value=2.5 Score=48.34 Aligned_cols=143 Identities=13% Similarity=0.183 Sum_probs=85.0
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeecccccceEEecCCcccccceeecCCcEEEccccc
Q 000657 262 PLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVR 341 (1370)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~e~l~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vT 341 (1370)
++.+++ .-.-|+.|.+.+ + .-...++.+|+-+.+.-. . ...+| + ..+++.++.+++.|+.||++.
T Consensus 12 t~~iGG-~A~~~~~~~~~~-l------~~p~~vlG~GSNlLv~D~--g--~~~vv-~--~~~~~~~~~~~~~v~~~AG~~ 76 (257)
T PRK13904 12 SVKIGP-PLEVLVLEEIDD-F------SQDGQIIGGANNLLISPN--P--KNLAI-L--GKNFDYIKIDGECLEIGGATK 76 (257)
T ss_pred ceeECc-eEEEEEEechhh-h------CCCeEEEeceeEEEEecC--C--ccEEE-E--ccCcCeEEEeCCEEEEEcCCc
Confidence 355665 334567787777 4 224778999999888433 1 24455 2 234677777888999999999
Q ss_pred HHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccc-ccCC-CCChhHHHHhcCCEEEEEeCCCCeE
Q 000657 342 LTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASP-ISDLNPLWMASGAKFHIVDCKGNIR 419 (1370)
Q Consensus 342 l~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~-~asp-~sD~~p~L~al~A~v~i~s~~g~~R 419 (1370)
+.++.....+. .+ .-++..++.+ |||||-+. ||.- -.++.=.|. +|++.+ +
T Consensus 77 l~~l~~~~~~~--gl------------~GlE~l~gIP----GtVGGAv~mNaGa~g~ei~d~l~----~V~~~~--~--- 129 (257)
T PRK13904 77 SGKIFNYAKKN--NL------------GGFEFLGKLP----GTLGGLVKMNAGLKEYEISNNLE----SICTNG--G--- 129 (257)
T ss_pred HHHHHHHHHHC--CC------------chhhhhcCCC----ccHHHHHHhcCCcCccchheeEE----EEEEEe--e---
Confidence 99999874331 11 1233344444 78888884 4432 122222222 123332 2
Q ss_pred EEehhHhhcccccccCCCCeEEEEEEccC
Q 000657 420 TTMAEEFFLGYRKVDLTSGEILLSIFLPW 448 (1370)
Q Consensus 420 ~vpl~dF~~g~~~~~L~~~Eil~~I~iP~ 448 (1370)
+++-+|..-+||.+.++ .||+++.+-.
T Consensus 130 ~~~~~e~~f~YR~S~~~--~iIl~a~f~l 156 (257)
T PRK13904 130 WIEKEDIGFGYRSSGIN--GVILEARFKK 156 (257)
T ss_pred EEeHHHCcccccCcCCC--cEEEEEEEEE
Confidence 57778877788887775 2555554443
|
|
| >PLN02441 cytokinin dehydrogenase | Back alignment and domain information |
|---|
Probab=84.46 E-value=7.7 Score=48.93 Aligned_cols=156 Identities=12% Similarity=0.056 Sum_probs=87.2
Q ss_pred ceEEecCCHHHHHHHHhhCC----C--cEEEeccCcceeeeeecccccceEEecCCccc------ccceeecCCcEEEcc
Q 000657 271 LKWYRPLKLQHLLELKSKYP----D--SKLLVGNTEVGIEMRLKRMQYQVLISVTHVPE------LNVLNVKDDGLEIGA 338 (1370)
Q Consensus 271 ~~~~~P~sl~e~l~ll~~~~----~--a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~E------L~~I~~~~~~l~IGA 338 (1370)
...++|+|.+|+.++++... . .+..+||+++.-. ......++||++++.. ...+..+...+++||
T Consensus 66 ~aVv~P~S~eDVa~iVr~A~~~~~~~~V~~rGgGHS~~G~---a~~~~GivIdms~Ln~i~~~~~ii~vd~~~~~VtV~a 142 (525)
T PLN02441 66 AAVLYPSSVEDIASLVRAAYGSSSPLTVAARGHGHSLNGQ---AQAPGGVVVDMRSLRGGVRGPPVIVVSGDGPYVDVSG 142 (525)
T ss_pred CEEEeCCCHHHHHHHHHHHhhccCCceEEEECCCcCCCCC---ccCCCeEEEECCCCCCcCccCceEEEcCCCCEEEEcC
Confidence 46789999999999887652 2 3456788776431 1122468999998766 233444567899999
Q ss_pred cccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCC--CCChhHHHHhcCCEEEEEeCCC
Q 000657 339 AVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP--ISDLNPLWMASGAKFHIVDCKG 416 (1370)
Q Consensus 339 ~vTl~~l~~~l~~~i~~~~~~~~~~~~~L~~~l~~iAs~qIRN~aTiGGNl~~asp--~sD~~p~L~al~A~v~i~s~~g 416 (1370)
++++.++.+.+.+. .+. ..+..=-+..|+||+|.++.- .+=-.-.+...=-.++++..+|
T Consensus 143 G~~~~dv~~~l~~~--Gla----------------P~~~~d~~~~TVGG~ist~G~gg~s~ryG~~~d~Vl~leVVtadG 204 (525)
T PLN02441 143 GELWIDVLKATLKH--GLA----------------PRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLELDVVTGKG 204 (525)
T ss_pred CCCHHHHHHHHHHC--CCc----------------cCCccccCceEEeEEcCCCCccccccccCcHHHhEEEEEEEeCCc
Confidence 99999988764331 000 011111234699999998421 1101111111112355666666
Q ss_pred CeEEEeh---hHhhcccccccCCCCeEEEEEEccC
Q 000657 417 NIRTTMA---EEFFLGYRKVDLTSGEILLSIFLPW 448 (1370)
Q Consensus 417 ~~R~vpl---~dF~~g~~~~~L~~~Eil~~I~iP~ 448 (1370)
..++..- .|.|..-+- .+..=-||+++.|..
T Consensus 205 evv~~s~~~n~DLF~Av~G-glG~fGIIT~atlrL 238 (525)
T PLN02441 205 EVVTCSPTQNSDLFFAVLG-GLGQFGIITRARIAL 238 (525)
T ss_pred eEEEeCCCCChhHHHhhcc-CCCCcEEEEEEEEEE
Confidence 4444433 244442211 122225788877754
|
|
| >TIGR03196 pucD xanthine dehydrogenase D subunit | Back alignment and domain information |
|---|
Probab=83.01 E-value=24 Score=47.10 Aligned_cols=61 Identities=15% Similarity=0.113 Sum_probs=45.0
Q ss_pred CCceeEEEEEecCCcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhh
Q 000657 1052 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDI 1123 (1370)
Q Consensus 1052 ~~~~~a~V~l~~DGsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~ 1123 (1370)
+...++....+.||+++|.++++. . ..+...+|+.||+|.++|+|.. |+-+|.+|++....
T Consensus 182 mEp~~~~A~~~~~g~l~v~~stQ~----p-~~~r~~lA~~Lglp~~~VrV~~------~~vGGgFG~K~~~~ 242 (768)
T TIGR03196 182 LAPEAALAMPAADGGFDLRAATQH----G-HKDREQIAACFDIPEEKIRITL------AGMGGAFGGKDDLN 242 (768)
T ss_pred cCCceEEEEEcCCCCEEEEECCCc----h-HHHHHHHHHHhCCCHHHEEEEe------CCCCCccCCccccc
Confidence 344556666667899999988644 2 3456788899999999999984 45678888886543
|
This gene has been characterized in B. subtilis as the molybdopterin binding-subunit of xanthine dehydrogenase (pucD), acting in conjunction with pucC, the FAD-binding subunit and pucE, the FeS-binding subunit. The more common XDH complex (GenProp0640) includes the xdhB gene which is related to pucD. It appears that most of the relatives of pucD outside of this narrow clade are involved in other processes as they are found in unrelated genomic contexts, contain the more common XDH complex and/or do not appear to process purines to allantoin. |
| >PLN02906 xanthine dehydrogenase | Back alignment and domain information |
|---|
Probab=80.22 E-value=39 Score=47.77 Aligned_cols=191 Identities=12% Similarity=0.128 Sum_probs=106.8
Q ss_pred CCceeEEEEEecC-CcEEEEEcCccCCcchHHHHHHHHHHHhCCCcccEEEecCCCCCCCCCCCCccchhhhh--HHHHH
Q 000657 1052 MNQAGALVHVYTD-GTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDI--YGAAV 1128 (1370)
Q Consensus 1052 ~~~~~a~V~l~~D-GsV~V~~g~~e~GqG~~T~~~qiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~--~g~Av 1128 (1370)
+...++....+.| |.++|+++++.. ..+...+|+.||||.++|+|. .|.-+|.+|++.+.. ..-++
T Consensus 740 mEp~~~~A~~~~~~g~l~v~~sTQ~p-----~~~r~~vA~~Lgip~~kVrV~------~~~vGGgFGgK~~~~~~~~~~a 808 (1319)
T PLN02906 740 LEPNSSLVWTSDSGNEVHMISSTQAP-----QKHQKYVAHVLGLPMSKVVCK------TKRIGGGFGGKETRSAFIAAAA 808 (1319)
T ss_pred cCCCeEEEEEeCCCCEEEEEECCcCH-----HHHHHHHHHHhCCChHHeEEE------eCCcccCccccccccchHHHHH
Confidence 4445566666667 689999886543 456778999999999999998 445678888887632 22333
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCHHHHHHHhhcccccceEEEEeecCCccccccCCCCCCcccccEEEEEEEEEeeCCCCc
Q 000657 1129 LDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGD 1208 (1370)
Q Consensus 1129 ~~Ac~~L~~rl~~~a~~~~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ga~~aeVeVD~~TG~ 1208 (1370)
..|+.++++ +++=. .+-+|-. ... +...+ + .+=.++-+|. .|+
T Consensus 809 AlaA~~~gR---PVkl~---~sReE~~----------~~~--------------~~R~~-----~-~~~~k~g~~~-dG~ 851 (1319)
T PLN02906 809 AVPAYLLNR---PVKLT---LDRDVDM----------MIT--------------GQRHA-----F-LGKYKVGFTN-EGK 851 (1319)
T ss_pred HHHHHHhCC---CEEEE---ecHHHHh----------hhc--------------CCccc-----e-EEEEEEEECC-CCC
Confidence 444444421 11000 0111100 000 00001 1 1233566774 699
Q ss_pred EEEEEEEEEEecCcccCcccchhhhHHHHHHHHHHHhcccccccccCCCCCCCCccccCCCCCCCCCCCCCCCCeeEEEE
Q 000657 1209 FHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSL 1288 (1370)
Q Consensus 1209 v~V~r~~~~~D~G~~iNP~~~~gQieGg~~qGiG~aL~Ee~~~d~~~~~~~~~G~l~~~~~~~Y~iP~~~DiP~~~~v~~ 1288 (1370)
+.=+++.+..|.|-..+.... ++..+... ...-|++|.. .++...
T Consensus 852 I~a~~~~~~~d~Ga~~~~~~~--------v~~~~~~~----------------------~~~~Y~ipn~-----~~~~~~ 896 (1319)
T PLN02906 852 ILALDLEIYNNGGNSLDLSGA--------VLERAMFH----------------------SDNVYEIPNV-----RIVGNV 896 (1319)
T ss_pred EEEEEEEEEecCcccCCcchH--------HHHHHHHh----------------------cCCCccCcce-----EEEEEE
Confidence 999999999999988654211 11111100 0123666632 244455
Q ss_pred eecCCCCCCCCCCCcCCCcccccchhHHHHHHHHHHHHHHhcCCC
Q 000657 1289 LKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHT 1333 (1370)
Q Consensus 1289 ~~~~~~~~~p~gaKGvGE~~~~~a~av~~AI~nAi~~A~~~~G~~ 1333 (1370)
+.+...|.+.| +|.|.+-. .+|+..++..+..++|++
T Consensus 897 v~TN~~~~ga~--RG~G~pq~------~fa~E~~mD~lA~~lG~D 933 (1319)
T PLN02906 897 CFTNFPSNTAF--RGFGGPQG------MLITENWIQRIAVELNKS 933 (1319)
T ss_pred EECCCCCCCcc--cCCCHHHH------HHHHHHHHHHHHHHhCcC
Confidence 55412234443 57666544 578888888877667764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1370 | ||||
| 2ckj_A | 1333 | Human Milk Xanthine Oxidoreductase Length = 1333 | 0.0 | ||
| 2e1q_A | 1333 | Crystal Structure Of Human Xanthine Oxidoreductase | 0.0 | ||
| 1wyg_A | 1331 | Crystal Structure Of A Rat Xanthine Dehydrogenase T | 0.0 | ||
| 3an1_A | 1331 | Crystal Structure Of Rat D428a Mutant, Urate Bound | 0.0 | ||
| 2e3t_A | 1331 | Crystal Structure Of Rat Xanthine Oxidoreductase Mu | 0.0 | ||
| 3una_A | 1332 | Crystal Structure Of Bovine Milk Xanthine Dehydroge | 0.0 | ||
| 1n5x_A | 1331 | Xanthine Dehydrogenase From Bovine Milk With Inhibi | 0.0 | ||
| 1fo4_A | 1332 | Crystal Structure Of Xanthine Dehydrogenase Isolate | 0.0 | ||
| 3zyv_A | 1335 | Crystal Structure Of The Mouse Liver Aldehyde Oxyda | 0.0 | ||
| 3sr6_C | 745 | Crystal Structure Of Reduced Bovine Xanthine Oxidas | 0.0 | ||
| 3nrz_C | 756 | Crystal Structure Of Bovine Xanthine Oxidase In Com | 0.0 | ||
| 3etr_C | 755 | Crystal Structure Of Xanthine Oxidase In Complex Wi | 0.0 | ||
| 3eub_C | 762 | Crystal Structure Of Desulfo-Xanthine Oxidase With | 0.0 | ||
| 1fiq_C | 763 | Crystal Structure Of Xanthine Oxidase From Bovine M | 0.0 | ||
| 1jro_B | 777 | Crystal Structure Of Xanthine Dehydrogenase From Rh | 1e-146 | ||
| 2w55_B | 777 | Crystal Structure Of Xanthine Dehydrogenase (E232q | 1e-146 | ||
| 3nvv_B | 334 | Crystal Structure Of Bovine Xanthine Oxidase In Com | 1e-63 | ||
| 1fiq_B | 350 | Crystal Structure Of Xanthine Oxidase From Bovine M | 7e-60 | ||
| 3b9j_B | 350 | Structure Of Xanthine Oxidase With 2-Hydroxy-6-Meth | 7e-60 | ||
| 3etr_B | 305 | Crystal Structure Of Xanthine Oxidase In Complex Wi | 1e-59 | ||
| 3hrd_A | 425 | Crystal Structure Of Nicotinate Dehydrogenase Lengt | 3e-45 | ||
| 1sij_A | 907 | Crystal Structure Of The Aldehyde Dehydrogenase (A. | 1e-44 | ||
| 1dgj_A | 907 | Crystal Structure Of The Aldehyde Oxidoreductase Fr | 3e-42 | ||
| 1fiq_A | 219 | Crystal Structure Of Xanthine Oxidase From Bovine M | 3e-39 | ||
| 3etr_A | 164 | Crystal Structure Of Xanthine Oxidase In Complex Wi | 4e-39 | ||
| 3eub_A | 165 | Crystal Structure Of Desulfo-Xanthine Oxidase With | 4e-39 | ||
| 1rm6_A | 769 | Structure Of 4-Hydroxybenzoyl-Coa Reductase From Th | 3e-27 | ||
| 1t3q_B | 788 | Crystal Structure Of Quinoline 2-Oxidoreductase Fro | 1e-24 | ||
| 1n5w_B | 809 | Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Co | 1e-22 | ||
| 1zxi_B | 809 | Reconstituted Co Dehydrogenase From Oligotropha Car | 1e-22 | ||
| 1ffu_B | 803 | Carbon Monoxide Dehydrogenase From Hydrogenophaga P | 1e-21 | ||
| 1jro_A | 462 | Crystal Structure Of Xanthine Dehydrogenase From Rh | 1e-18 | ||
| 1jro_A | 462 | Crystal Structure Of Xanthine Dehydrogenase From Rh | 2e-18 | ||
| 2w3r_A | 462 | Crystal Structure Of Xanthine Dehydrogenase (Desulf | 1e-18 | ||
| 2w3r_A | 462 | Crystal Structure Of Xanthine Dehydrogenase (Desulf | 2e-18 | ||
| 3hrd_B | 330 | Crystal Structure Of Nicotinate Dehydrogenase Lengt | 1e-17 | ||
| 1ffu_A | 163 | Carbon Monoxide Dehydrogenase From Hydrogenophaga P | 1e-17 | ||
| 1n5w_A | 166 | Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Co | 1e-14 | ||
| 1t3q_A | 168 | Crystal Structure Of Quinoline 2-Oxidoreductase Fro | 4e-14 | ||
| 1rm6_C | 161 | Structure Of 4-Hydroxybenzoyl-Coa Reductase From Th | 2e-13 | ||
| 3hrd_D | 160 | Crystal Structure Of Nicotinate Dehydrogenase Lengt | 1e-10 | ||
| 3hrd_C | 296 | Crystal Structure Of Nicotinate Dehydrogenase Lengt | 1e-08 | ||
| 1ffv_C | 287 | Carbon Monoxide Dehydrogenase From Hydrogenophaga P | 3e-08 | ||
| 1ffu_C | 287 | Carbon Monoxide Dehydrogenase From Hydrogenophaga P | 6e-08 |
| >pdb|2CKJ|A Chain A, Human Milk Xanthine Oxidoreductase Length = 1333 | Back alignment and structure |
|
| >pdb|2E1Q|A Chain A, Crystal Structure Of Human Xanthine Oxidoreductase Mutant, Glu803val Length = 1333 | Back alignment and structure |
|
| >pdb|1WYG|A Chain A, Crystal Structure Of A Rat Xanthine Dehydrogenase Triple Mutant (C535a, C992r And C1324s) Length = 1331 | Back alignment and structure |
|
| >pdb|3AN1|A Chain A, Crystal Structure Of Rat D428a Mutant, Urate Bound Form Length = 1331 | Back alignment and structure |
|
| >pdb|2E3T|A Chain A, Crystal Structure Of Rat Xanthine Oxidoreductase Mutant (W335a And F336l) Length = 1331 | Back alignment and structure |
|
| >pdb|3UNA|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With Nad Bound Length = 1332 | Back alignment and structure |
|
| >pdb|1N5X|A Chain A, Xanthine Dehydrogenase From Bovine Milk With Inhibitor Tei- 6720 Bound Length = 1331 | Back alignment and structure |
|
| >pdb|1FO4|A Chain A, Crystal Structure Of Xanthine Dehydrogenase Isolated From Bovine Milk Length = 1332 | Back alignment and structure |
|
| >pdb|3ZYV|A Chain A, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3 (Maox3) Length = 1335 | Back alignment and structure |
|
| >pdb|3SR6|C Chain C, Crystal Structure Of Reduced Bovine Xanthine Oxidase In Complex With Arsenite Length = 745 | Back alignment and structure |
|
| >pdb|3NRZ|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex With Hypoxanthine Length = 756 | Back alignment and structure |
|
| >pdb|3ETR|C Chain C, Crystal Structure Of Xanthine Oxidase In Complex With Lumazine Length = 755 | Back alignment and structure |
|
| >pdb|3EUB|C Chain C, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine Length = 762 | Back alignment and structure |
|
| >pdb|1FIQ|C Chain C, Crystal Structure Of Xanthine Oxidase From Bovine Milk Length = 763 | Back alignment and structure |
|
| >pdb|1JRO|B Chain B, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter Capsulatus Length = 777 | Back alignment and structure |
|
| >pdb|2W55|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (E232q Variant) From Rhodobacter Capsulatus In Complex With Hypoxanthine Length = 777 | Back alignment and structure |
|
| >pdb|3NVV|B Chain B, Crystal Structure Of Bovine Xanthine Oxidase In Complex With Arsenite Length = 334 | Back alignment and structure |
|
| >pdb|1FIQ|B Chain B, Crystal Structure Of Xanthine Oxidase From Bovine Milk Length = 350 | Back alignment and structure |
|
| >pdb|3B9J|B Chain B, Structure Of Xanthine Oxidase With 2-Hydroxy-6-Methylpurine Length = 350 | Back alignment and structure |
|
| >pdb|3ETR|B Chain B, Crystal Structure Of Xanthine Oxidase In Complex With Lumazine Length = 305 | Back alignment and structure |
|
| >pdb|3HRD|A Chain A, Crystal Structure Of Nicotinate Dehydrogenase Length = 425 | Back alignment and structure |
|
| >pdb|1SIJ|A Chain A, Crystal Structure Of The Aldehyde Dehydrogenase (A.K.A. Aor Or Mop) Of Desulfovibrio Gigas Covalently Bound To [aso3]- Length = 907 | Back alignment and structure |
|
| >pdb|1DGJ|A Chain A, Crystal Structure Of The Aldehyde Oxidoreductase From Desulfovibrio Desulfuricans Atcc 27774 Length = 907 | Back alignment and structure |
|
| >pdb|1FIQ|A Chain A, Crystal Structure Of Xanthine Oxidase From Bovine Milk Length = 219 | Back alignment and structure |
|
| >pdb|3ETR|A Chain A, Crystal Structure Of Xanthine Oxidase In Complex With Lumazine Length = 164 | Back alignment and structure |
|
| >pdb|3EUB|A Chain A, Crystal Structure Of Desulfo-Xanthine Oxidase With Xanthine Length = 165 | Back alignment and structure |
|
| >pdb|1RM6|A Chain A, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera Aromatica Length = 769 | Back alignment and structure |
|
| >pdb|1T3Q|B Chain B, Crystal Structure Of Quinoline 2-Oxidoreductase From Pseudomonas Putida 86 Length = 788 | Back alignment and structure |
|
| >pdb|1N5W|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh); Oxidized Form Length = 809 | Back alignment and structure |
|
| >pdb|1ZXI|B Chain B, Reconstituted Co Dehydrogenase From Oligotropha Carboxidovorans Length = 809 | Back alignment and structure |
|
| >pdb|1FFU|B Chain B, Carbon Monoxide Dehydrogenase From Hydrogenophaga Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of The Molybdenum Cofactor Length = 803 | Back alignment and structure |
|
| >pdb|1JRO|A Chain A, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter Capsulatus Length = 462 | Back alignment and structure |
|
| >pdb|1JRO|A Chain A, Crystal Structure Of Xanthine Dehydrogenase From Rhodobacter Capsulatus Length = 462 | Back alignment and structure |
|
| >pdb|2W3R|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form) From Rhodobacter Capsulatus In Complex With Hypoxanthine Length = 462 | Back alignment and structure |
|
| >pdb|2W3R|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form) From Rhodobacter Capsulatus In Complex With Hypoxanthine Length = 462 | Back alignment and structure |
|
| >pdb|3HRD|B Chain B, Crystal Structure Of Nicotinate Dehydrogenase Length = 330 | Back alignment and structure |
|
| >pdb|1FFU|A Chain A, Carbon Monoxide Dehydrogenase From Hydrogenophaga Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of The Molybdenum Cofactor Length = 163 | Back alignment and structure |
|
| >pdb|1N5W|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh); Oxidized Form Length = 166 | Back alignment and structure |
|
| >pdb|1T3Q|A Chain A, Crystal Structure Of Quinoline 2-Oxidoreductase From Pseudomonas Putida 86 Length = 168 | Back alignment and structure |
|
| >pdb|1RM6|C Chain C, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera Aromatica Length = 161 | Back alignment and structure |
|
| >pdb|3HRD|D Chain D, Crystal Structure Of Nicotinate Dehydrogenase Length = 160 | Back alignment and structure |
|
| >pdb|3HRD|C Chain C, Crystal Structure Of Nicotinate Dehydrogenase Length = 296 | Back alignment and structure |
|
| >pdb|1FFV|C Chain C, Carbon Monoxide Dehydrogenase From Hydrogenophaga Pseudoflava Length = 287 | Back alignment and structure |
|
| >pdb|1FFU|C Chain C, Carbon Monoxide Dehydrogenase From Hydrogenophaga Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of The Molybdenum Cofactor Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1370 | |||
| 3unc_A | 1332 | Xanthine dehydrogenase/oxidase; oxidoreductase; HE | 0.0 | |
| 3nvz_C | 755 | Xanthine dehydrogenase/oxidase; hydroxylase, homod | 0.0 | |
| 2w3s_B | 777 | Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2 | 0.0 | |
| 1vlb_A | 907 | Aldehyde oxidoreductase; iron-sulphur cluster; HET | 0.0 | |
| 1vlb_A | 907 | Aldehyde oxidoreductase; iron-sulphur cluster; HET | 3e-53 | |
| 1dgj_A | 907 | Aldehyde oxidoreductase; beta half-barrel, four-he | 0.0 | |
| 1dgj_A | 907 | Aldehyde oxidoreductase; beta half-barrel, four-he | 9e-53 | |
| 2w3s_A | 462 | Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2 | 0.0 | |
| 3hrd_A | 425 | Nicotinate dehydrogenase large molybdopterin subun | 1e-165 | |
| 1rm6_A | 769 | 4-hydroxybenzoyl-COA reductase alpha subunit; xant | 1e-158 | |
| 3nvz_B | 305 | Xanthine dehydrogenase/oxidase; hydroxylase, homod | 1e-157 | |
| 1t3q_B | 788 | Quinoline 2-oxidoreductase large subunit; QOR, mol | 1e-142 | |
| 1n62_B | 809 | Carbon monoxide dehydrogenase large chain; CODH, m | 1e-134 | |
| 1ffv_B | 803 | CUTL, molybdoprotein of carbon monoxide dehydrogen | 1e-133 | |
| 3hrd_B | 330 | Nicotinate dehydrogenase medium molybdopterin subu | 5e-93 | |
| 3nvw_A | 164 | Xanthine dehydrogenase/oxidase; hydroxylase, homod | 1e-89 | |
| 3hrd_C | 296 | Nicotinate dehydrogenase FAD-subunit; selenium lig | 2e-57 | |
| 1n62_A | 166 | Carbon monoxide dehydrogenase small chain; CODH, m | 5e-55 | |
| 3hrd_D | 160 | Nicotinate dehydrogenase small FES subunit; seleni | 9e-55 | |
| 1rm6_C | 161 | 4-hydroxybenzoyl-COA reductase gamma subunit; xant | 4e-54 | |
| 1t3q_A | 168 | Quinoline 2-oxidoreductase small subunit; QOR, mol | 1e-53 | |
| 1ffv_A | 163 | CUTS, iron-sulfur protein of carbon monoxide dehyd | 2e-53 | |
| 1t3q_C | 288 | Quinoline 2-oxidoreductase medium subunit; QOR, mo | 5e-53 | |
| 1n62_C | 288 | Carbon monoxide dehydrogenase medium chain; CODH, | 3e-50 | |
| 1ffv_C | 287 | CUTM, flavoprotein of carbon monoxide dehydrogenas | 5e-50 | |
| 1rm6_B | 324 | 4-hydroxybenzoyl-COA reductase beta subunit; xanth | 2e-28 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 |
| >3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A* Length = 1332 | Back alignment and structure |
|---|
Score = 1744 bits (4518), Expect = 0.0
Identities = 637/1363 (46%), Positives = 863/1363 (63%), Gaps = 52/1363 (3%)
Query: 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKS 76
E + +VNG + V + TLL YLR +GL GTKLGCGEGGCGACTVM+S+YD+
Sbjct: 3 ADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQ 62
Query: 77 KKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIM 136
K +H + NACLAP+ +L + V TVEG+G+ K LHP+QE + +SHGSQCGFCTPG +M
Sbjct: 63 DKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIVM 122
Query: 137 SMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKE 196
SMY+LLR+ Q PT E+IE++ GNLCRCTGYRPI+ FR FAK
Sbjct: 123 SMYTLLRN-QPEPTVEEIEDAFQGNLCRCTGYRPILQGFRTFAKNGG------------- 168
Query: 197 GEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELL 256
C G +C M + P + +D + +E IFPPELL
Sbjct: 169 ---CCGGNGNNPNCCMNQ----KKDHTVTLSPSLFNPEEFMPLDPT----QEPIFPPELL 217
Query: 257 LRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQV 314
K P F G + W + L+ LL+LK+++P++KL+VGNTE+GIEM+ K + +
Sbjct: 218 RLKDVPPKQLRFEGERVTWIQASTLKELLDLKAQHPEAKLVVGNTEIGIEMKFKNQLFPM 277
Query: 315 LISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWF 374
+I +PELN + +G+ GAA L+ + K + V + P +T + +EQ++WF
Sbjct: 278 IICPAWIPELNAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWF 337
Query: 375 AGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVD 434
AG Q+K+VAS+GGNI TASPISDLNP++MASG K IV M FF YRK
Sbjct: 338 AGKQVKSVASLGGNIITASPISDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTL 397
Query: 435 LTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLV 494
L EILLSI +P++R EF FKQA RR+DDIA V GMRV + V + L
Sbjct: 398 LGPEEILLSIEIPYSREDEFFSAFKQASRREDDIAKVTCGMRVLFQPGS--MQVKELALC 455
Query: 495 YGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSF 554
YGG+A ++SA KT + K W+++LLQ+ L ++ L DAPGGM++FR++LTLSF
Sbjct: 456 YGGMADRTISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLTLSF 515
Query: 555 FFKFFLWVSHQMEGKNSIK-ESVPSTHLSAMQSFHRPSIIGNQDYEITKHGTS----VGS 609
FFKF+L V ++ + K + T+ SA F + Q ++ +G S VG
Sbjct: 516 FFKFYLTVLKKLGKDSKDKCGKLDPTYTSATLLFQKDPPANIQLFQEVPNGQSKEDTVGR 575
Query: 610 PEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIF 669
P HL++ +Q +GEA Y DD P N L LV S R HA+I SID S A+ PGFV
Sbjct: 576 PLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFVCFL 635
Query: 670 FAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPA 729
A+D+ G N G + DE +FA + VTCVG +IG VVA+T E A+ A+ V+V YE+LPA
Sbjct: 636 SADDIPGSNETG-LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTYEDLPA 694
Query: 730 ILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVV 789
I++I++AI SF+ +E KGD+ F + D ++ GE+ +GGQ+HFYLE H ++
Sbjct: 695 IITIEDAIKNNSFYG-SELKIEKGDLKKGFS--EADNVVSGELYIGGQDHFYLETHCTIA 751
Query: 790 WTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAA 849
E+ + STQ K Q +V+ +LG+P+++++ + KR+GGGFGGKETRS ++ A
Sbjct: 752 IPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTLVSVA 811
Query: 850 AAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSL 909
A+ ++ PV LDR+ DM+I+G RH FL +YKVGF G ++AL+++ Y+NAGNS
Sbjct: 812 VALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSR 871
Query: 910 DLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVA 969
DLS +++ERA+FH DN Y+IPN+R G +C TN SNTAFRGFGGPQ + I ENW+ VA
Sbjct: 872 DLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVA 931
Query: 970 VEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNN 1029
V EE+R N EG + H+ Q+L+ ++ W+E S + + EVD FN N
Sbjct: 932 VTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKFNKEN 991
Query: 1030 RWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAA 1089
WKKRG+ ++PTKFGISFT+ +NQAGAL+HVYTDG+VLV+HGG EMGQGLHTK+ QVA+
Sbjct: 992 CWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVAS 1051
Query: 1090 SAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFN 1149
A IP+S +++SETST+ VPN+SPTAAS S+DIYG AV +AC+ I R+EP K+
Sbjct: 1052 KALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKKNPDG 1111
Query: 1150 SFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDF 1209
S+ + A Y R+ LS GFY TP + + + T GN F YFTYG A +EVEID LTGD
Sbjct: 1112 SWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDH 1171
Query: 1210 HTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGP 1269
++++D+G SLNPAID+GQ+EGAF+QGLG LEEL + P G L+T GP
Sbjct: 1172 KNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYS-------PEGSLHTRGP 1224
Query: 1270 GSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARAD 1329
+YKIP+ +P +F VSLL+ PN KAI++SKAVGEPP FL +SVFFAIKDAI AARA
Sbjct: 1225 STYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRAARAQ 1284
Query: 1330 AGHTG---WFPLDNPATPERIRMACLDEFTAPFINSE---YRP 1366
+ F LD+PATPE+IR AC+D+FT + +P
Sbjct: 1285 HTNNNTKELFRLDSPATPEKIRNACVDKFTTLCVTGAPGNCKP 1327
|
| >3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C* Length = 755 | Back alignment and structure |
|---|
Score = 1074 bits (2780), Expect = 0.0
Identities = 381/761 (50%), Positives = 513/761 (67%), Gaps = 14/761 (1%)
Query: 606 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGF 665
+VG P HL++ +Q +GEA Y DD P N L LV S R HA+I SID S A+ PGF
Sbjct: 2 TVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGF 61
Query: 666 VGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYE 725
V A+D+ G N G + DE +FA + VTCVG +IG VVA+T E A+ A+ V+V YE
Sbjct: 62 VCFLSADDIPGSNETG-LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTYE 120
Query: 726 ELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPH 785
+LPAI++I++AI SF+ +E KGD+ F + D ++ GE+ +GGQ+HFYLE H
Sbjct: 121 DLPAIITIEDAIKNNSFYG-SELKIEKGDLKKGFS--EADNVVSGELYIGGQDHFYLETH 177
Query: 786 SSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAF 845
++ E+ + STQ K Q +V+ +LG+P+++++ + KR+GGGFGGKETRS
Sbjct: 178 CTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTL 237
Query: 846 IAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNA 905
++ A A+ ++ PV LDR+ DM+I+G RH FL +YKVGF G ++AL+++ Y+NA
Sbjct: 238 VSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNA 297
Query: 906 GNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWI 965
GNS DLS +++ERA+FH DN Y+IPN+R G +C TN SNTAFRGFGGPQ + I ENW+
Sbjct: 298 GNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWM 357
Query: 966 QRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNF 1025
VAV EE+R N EG + H+ Q+L+ ++ W+E S + + EVD F
Sbjct: 358 SEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKF 417
Query: 1026 NLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVA 1085
N N WKKRG+ ++PTKFGISFT+ +NQAGAL+HVYTDG+VLV+HGG EMGQGLHTK+
Sbjct: 418 NKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMV 477
Query: 1086 QVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK 1145
QVA+ A IP+S +++SETST+ VPN+SPTAAS S+DIYG AV +AC+ I R+EP K
Sbjct: 478 QVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKK 537
Query: 1146 HNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTL 1205
+ S+ + A Y R+ LS GFY TP + + + T GN F YFTYG A +EVEID L
Sbjct: 538 NPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCL 597
Query: 1206 TGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLY 1265
TGD ++++D+G SLNPAID+GQ+EGAF+QGLG LEEL + P G L+
Sbjct: 598 TGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYS-------PEGSLH 650
Query: 1266 TCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISA 1325
T GP +YKIP+ +P +F VSLL+ PN KAI++SKAVGEPP FL +SVFFAIKDAI A
Sbjct: 651 TRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRA 710
Query: 1326 ARADAGHTG---WFPLDNPATPERIRMACLDEFTAPFINSE 1363
ARA + F LD+PATPE+IR AC+D+FT +
Sbjct: 711 ARAQHTNNNTKELFRLDSPATPEKIRNACVDKFTTLCVTGA 751
|
| >2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B* Length = 777 | Back alignment and structure |
|---|
Score = 1068 bits (2764), Expect = 0.0
Identities = 325/785 (41%), Positives = 430/785 (54%), Gaps = 55/785 (7%)
Query: 606 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGF 665
SVG P H S+R VTG+A Y DD P P N LH A LS A I +D R SPG
Sbjct: 2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGV 61
Query: 666 VGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYE 725
+ +F A D+ DN P + E + A+ V VGQ I +V A +H A++A+RK ++ Y
Sbjct: 62 IAVFTAADLPHDNDASPAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYA 121
Query: 726 ELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPH 785
PAIL++ +A+ A S + +GDV+ + EG +GGQEHFYLE
Sbjct: 122 PRPAILTLDQALAADSRFEGGPVIWARGDVETALA--GAAHLAEGCFEIGGQEHFYLEGQ 179
Query: 786 SSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAF 845
+++ V + S+Q P + Q V+H LGL V + +R+GGGFGGKE++
Sbjct: 180 AALAL--PAEGGVVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKESQGNH 237
Query: 846 IAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNA 905
+A A AV + RP + DRD DM+I+G+RH F +Y++G GK+L D
Sbjct: 238 LAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARC 297
Query: 906 GNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWI 965
G S DLSL V +RAM H+D Y +P +RI + TN SNTAFRGFGGPQG L E I
Sbjct: 298 GWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAI 357
Query: 966 QRVAVEVRKSPEEIREINF--------------------QGEGSILHYGQQLQHCTLFPL 1005
+ +A + + P E+R +NF + HYGQ++ C L L
Sbjct: 358 EHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQEVADCVLGEL 417
Query: 1006 WNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDG 1065
L+ S +F R E+ +N NR RGIA+ P KFGISFTL +NQAGALV +YTDG
Sbjct: 418 VTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDG 477
Query: 1066 TVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYG 1125
+V + HGG EMGQGLH K+ QVAA+ I V ++ T T KVPN S TAAS+ +D+ G
Sbjct: 478 SVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNG 537
Query: 1126 AAVLDACEQIKARMEPIASKH-------------------NFNSFAELASACYVQRIDLS 1166
AV DACE ++ R+ + FAE+ +A Y+ RI LS
Sbjct: 538 MAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLS 597
Query: 1167 AHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNP 1226
A GFY TP++ +D + G+G PF YF YGAA EV ID LTG+ +++ D G SLNP
Sbjct: 598 ATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNP 657
Query: 1227 AIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNV 1286
A+D+GQIEGA++QG GWL EEL W G L T P +YKIP+ +D P FNV
Sbjct: 658 ALDIGQIEGAYVQGAGWLTTEELVWD-------HCGRLMTHAPSTYKIPAFSDRPRIFNV 710
Query: 1287 SLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPER 1346
+L + I SKAVGEPPF L S F A+ DA +A W L PATPE
Sbjct: 711 ALWDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPH-----WPDLQAPATPEA 765
Query: 1347 IRMAC 1351
+ A
Sbjct: 766 VLAAV 770
|
| >1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A* Length = 907 | Back alignment and structure |
|---|
Score = 888 bits (2298), Expect = 0.0
Identities = 192/801 (23%), Positives = 322/801 (40%), Gaps = 61/801 (7%)
Query: 574 ESVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDD--TP 631
+ + + A + + ++++ G GS ++ +VTG +Y D
Sbjct: 143 KPLVDAVMDAAAVINGKKPETDLEFKMPADGRIWGSKYPRPTAVAKVTGTLDYGADLGLK 202
Query: 632 MPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVA------ 685
MP LH A+V ++ HA I ID S A + PG + +DV+G NRI ++
Sbjct: 203 MPAGTLHLAMVQAKVSHANIKGIDTSEALTMPGVHSVITHKDVKGKNRITGLITFPTNKG 262
Query: 686 ---DEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF 742
D + E V G I +V A++ A+ A+ KV+V+ EELPA +S A +
Sbjct: 263 DGWDRPILCDEKVFQYGDCIALVCADSEANARAAAEKVKVDLEELPAYMSGPAAAAEDAI 322
Query: 743 --HPNT------ERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDH 794
HP T + + D F D +EG+ VG Q H +EP + + M
Sbjct: 323 EIHPGTPNVYFEQPIVKGEDTGPIFA--SADVTVEGDFYVGRQPHMPIEPDVAFAY-MGD 379
Query: 795 GNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRS-AFIAAAAAVP 853
+ ++ S + H ++ +GL ++V +GG FG K + + + A AA+
Sbjct: 380 DGKCYIHSKSIGVHLHLYMIAPGVGLEPDQLVLVANPMGGTFGYKFSPTSEALVAVAAM- 438
Query: 854 SFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSL 913
RPV+L + +G+R + K +G +LA++ + + G +
Sbjct: 439 --ATGRPVHLRYNYQQQQQYTGKRSPWEMNVKFAAKKDGTLLAMESDWLVDHGPYSEFGD 496
Query: 914 AVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVR 973
+ R Y IPN+R +G TN +AFRG+G PQ M +E + +A ++
Sbjct: 497 LLTLRGAQFIGAGYNIPNIRGLGRTVATNHVWGSAFRGYGAPQSMFASECLMDMLAEKLG 556
Query: 974 KSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKK 1033
P E+R N G GQ+ + +L + ++L+ + + + K
Sbjct: 557 MDPLELRYKNAYRPGDTNPTGQEPEVFSLPDMIDQLRPKYQAALEKAQ----KESTATHK 612
Query: 1034 RGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAF- 1092
+G+ + +G + + A + DGT+ V + GQG A A
Sbjct: 613 KGVGISIGVYGSGLD--GPDASEAWAELNADGTITVHTAWEDHGQGADIGCVGTAHEALR 670
Query: 1093 --NIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNS 1150
+ + + +T PN+ P+ S + G A+ ACE + E + +
Sbjct: 671 PMGVAPEKIKFTWPNTATTPNSGPSGGSRQQVMTGNAIRVACENLLKACEKPGGGY--YT 728
Query: 1151 FAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFH 1210
+ EL +A +I + + D +TG G PF + YG AEV +D TG
Sbjct: 729 YDELKAADKPTKI---TGNWTASGATHCDAVTGLGKPFVVYMYGVFMAEVTVDVATGQTT 785
Query: 1211 TRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPG 1270
++ DLG N GQI G QG+G E+ +
Sbjct: 786 VDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDFEDIKKHATL-----------V 834
Query: 1271 SYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADA 1330
P + +P K ++ + HP + VGE P +S AI +AI +A
Sbjct: 835 GAGFPFIKQIPDKLDIVYVN-HPRPDGPFGASGVGELPL---TSPHAAIINAIKSA---- 886
Query: 1331 GHTGWFPLDNPATPERIRMAC 1351
TG PA PE++ A
Sbjct: 887 --TGVRIYRLPAYPEKVLEAL 905
|
| >1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A* Length = 907 | Back alignment and structure |
|---|
Score = 202 bits (515), Expect = 3e-53
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 17/163 (10%)
Query: 20 EAILYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKK 78
+ ++ VNG + A L + LR +GLTG K+GC +G CGAC+V++
Sbjct: 3 QKVITVNG-IEQNLFVDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVILD-------- 53
Query: 79 CVHCAVNACLAPLYSL-EGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMS 137
V AC+ + + +G + T+EGVG ++ LHP+Q++ V G+QCGFC+PGFI+S
Sbjct: 54 --GKVVRACVTKMKRVADGAQITTIEGVGQPEN-LHPLQKAWVLHGGAQCGFCSPGFIVS 110
Query: 138 MYSLLRSSQTPPTEEQIEESLAG--NLCRCTGYRPIVDAFRVF 178
LL + P+ E + + N CRCTGY+P+VDA
Sbjct: 111 AKGLLD-TNADPSREDVRDWFQKHRNACRCTGYKPLVDAVMDA 152
|
| >1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 Length = 907 | Back alignment and structure |
|---|
Score = 868 bits (2245), Expect = 0.0
Identities = 185/799 (23%), Positives = 317/799 (39%), Gaps = 59/799 (7%)
Query: 574 ESVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPM- 632
+ + + A + +++ G GS S+ +VTG AE+ D +
Sbjct: 143 KPLVDAVMDAAAILRGEKTVEEISFKMPADGRIWGSSIPRPSAVAKVTGLAEFGADAALR 202
Query: 633 -PPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVA------ 685
P N LH AL ++ HA I ID S A PG + +DV+G NRI ++
Sbjct: 203 MPENTLHLALAQAKVSHALIKGIDTSEAEKMPGVYKVLTHKDVKGKNRITGLITFPTNKG 262
Query: 686 ---DEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF 742
+ + + G + +V A++ A+ A+ KV+ + E LP +S EA+ +
Sbjct: 263 DGWERPILNDSKIFQYGDALAIVCADSEANARAAAEKVKFDLELLPEYMSAPEAMAPDAI 322
Query: 743 --HPNT-----ERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHG 795
HP T ++ KG+ + F + + + EG Q H +EP + ++
Sbjct: 323 EIHPGTPNVYYDQLEEKGEDTVPFFNDPANVVAEGSYYTQRQPHLPIEPDVGYGY-INEQ 381
Query: 796 NEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTK-RIGGGFGGKETRSAFIAAAAAVPS 854
+V + S + A H ++ LGL K + + GG FG K + + + A V
Sbjct: 382 GQVVIHSKSVAIHLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSPT--MEALVGVAV 439
Query: 855 FLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLA 914
RP +L + + +G+R F + +GK+LA++ + + G +
Sbjct: 440 MATGRPCHLRYNYEQQQNYTGKRSPFWTTMRYAADRQGKILAMETDWSVDHGPYSEFGDL 499
Query: 915 VLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRK 974
+ R + Y I N+R G TN AFRG+G P+ +E + +A ++
Sbjct: 500 LTLRGAQYIGAGYGIANIRGTGRTVATNHCWGAAFRGYGAPESEFPSEVLMDELAEKLGM 559
Query: 975 SPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKR 1034
P E+R +N EG GQ + +L ++++++ + R + + KR
Sbjct: 560 DPFELRALNCYREGDTTSSGQIPEVMSLPEMFDKMRPYYEESKKRVK----ERSTAEIKR 615
Query: 1035 GIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASA--- 1091
G+ + +G + + A V + DG+V + + + GQG A A
Sbjct: 616 GVGVALGVYGAGLD--GPDTSEAWVELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRP 673
Query: 1092 FNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSF 1151
I ++ + T K PN+ P S S + G A+ ACE + M F +
Sbjct: 674 LGITPENIHLVMNDTSKTPNSGPAGGSRSQVVTGNAIRVACEMLIEGMRKPGGG--FFTP 731
Query: 1152 AELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHT 1211
AE+ + + G + P D D G+G+PF + YG EV ++ TG
Sbjct: 732 AEMK----AEGRPMRYDGKWTAPAKDCDA-KGQGSPFACYMYGLFLTEVAVEVATGKATV 786
Query: 1212 RMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGS 1271
+ D+G N + GQI G QG+G E+ + G
Sbjct: 787 EKMVCVADIGKICNKLVVDGQIYGGLAQGVGLALSEDYEDLKKHST-----------MGG 835
Query: 1272 YKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAG 1331
IPS+ +P + ++ P + VGE P + AI + I A
Sbjct: 836 AGIPSIKMIPDDIEIVYVE-TPRKDGPFGASGVGEMPLTAPHA---AIINGIYNA----- 886
Query: 1332 HTGWFPLDNPATPERIRMA 1350
G PA PE++ A
Sbjct: 887 -CGARVRHLPARPEKVLEA 904
|
| >1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 Length = 907 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 9e-53
Identities = 63/172 (36%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 23 LYVNG-LRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCV 80
L VNG R++L + L++ LR + LT K+GCG+G CGACTV++
Sbjct: 6 LIVNGMARRLLVS--PNDLLVDVLRSQLQLTSVKVGCGKGQCGACTVILD---------- 53
Query: 81 HCAVNACLAPLYSL-EGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMY 139
V AC+ + + E V T+EG+G LHP+Q + ++ +QCGFCTPGFI+S
Sbjct: 54 GKVVRACIIKMSRVAENASVTTLEGIGAPDC-LHPLQHAWIQHGAAQCGFCTPGFIVSAK 112
Query: 140 SLLRSSQTPPTEEQIEESLAG--NLCRCTGYRPIVDAFRVFAKTNDALYTNM 189
+LL P+ E + + N+CRCTGY+P+VDA A T
Sbjct: 113 ALLD-ENVAPSREDVRDWFQKHHNICRCTGYKPLVDAVMDAAAILRGEKTVE 163
|
| >2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A* Length = 462 | Back alignment and structure |
|---|
Score = 569 bits (1469), Expect = 0.0
Identities = 140/547 (25%), Positives = 221/547 (40%), Gaps = 94/547 (17%)
Query: 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKC 79
E +NG + + +LLE+LR GLTGTK GC EG CGACTVM+
Sbjct: 2 EIAFLLNGETRRVRIEDPTQSLLEWLRAEGLTGTKEGCNEGDCGACTVMIRDAAG----- 56
Query: 80 VHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMY 139
AVNACL L + G + T+EG+ LHP+Q++++ HGSQCGFCTPGFI+SM
Sbjct: 57 -SRAVNACLMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMA 115
Query: 140 SLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTNDALYTNMSSMSLKEGEF 199
+ + ++ LAGNLCRCTGY PI+ A A
Sbjct: 116 AAHD-----RDRKDYDDLLAGNLCRCTGYAPILRAAEAAAGEPP---------------- 154
Query: 200 VCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLRK 259
+ + +S+ + + A
Sbjct: 155 -ADWLQADAAFTLAQLSSGVRGQTAPAF-------------------------------- 181
Query: 260 SNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVT 319
P P ++ L+ G T+V + + + ++
Sbjct: 182 -LPETSDALADWYLAHP--------------EATLIAGGTDVSLWVTKALRDLPEVAFLS 226
Query: 320 HVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQI 379
H +L + DG IGA V + L A A ++ FA Q+
Sbjct: 227 HCKDLAQIRETPDGYGIGAGVTIAALR-----------AFAEGPHPALAGLLRRFASEQV 275
Query: 380 KNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGE 439
+ VA++GGNI SPI D P +A GA + + R E+FFL YRK D GE
Sbjct: 276 RQVATIGGNIANGSPIGDGPPALIAMGASLTLRRGQER-RRMPLEDFFLEYRKQDRRPGE 334
Query: 440 ILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVA 499
+ S+ LP + ++ +K + R D DI+ V + + L + + A + +GG+A
Sbjct: 335 FVESVTLP--KSAPGLRCYKLSKRFDQDISAVCGCLNLTL----KGSKIETARIAFGGMA 388
Query: 500 PLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFF 559
+ A + ++G+ + ++ + AL +L D D +R + + ++
Sbjct: 389 GVPKRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSD-MRASAAYRMNAAQAMALRYV 447
Query: 560 LWVSHQM 566
+S +
Sbjct: 448 RELSGEA 454
|
| >3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri} Length = 425 | Back alignment and structure |
|---|
Score = 499 bits (1287), Expect = e-165
Identities = 126/409 (30%), Positives = 200/409 (48%), Gaps = 12/409 (2%)
Query: 602 KHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARS 661
K +G +V + S +V G A++ D P+ L+A + S PHARI+S+D S AR+
Sbjct: 3 KDYQVLGKNKVKVDSLEKVMGTAKFAADYS-FPDMLYAGVFRSTVPHARIVSLDLSKARA 61
Query: 662 SPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQ 721
G + + G NR G ++ DE + V G I VV A+T + + A +
Sbjct: 62 IDGVEAVLDYHAIPGKNRFGIIIKDEPCLVDDKVRRYGDAIAVVAAQTPDLVQEALDAIT 121
Query: 722 VEYEELPAILSIQEAIDAKSF--HPNT----ERCFRKGDVDICFQSGQCDKIIEGEVRVG 775
+EYEEL I +++ A++ S H +T + GDVD F+ QCD ++E
Sbjct: 122 IEYEELEGIFTMERALEEDSPAIHGDTNIHQVKHLEYGDVDAAFK--QCDIVVEDTYSTH 179
Query: 776 GQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGG 835
H ++EP + V + D+ + ++ STQ P + V+ +L LP SKV GGG
Sbjct: 180 RLTHMFIEPDAGVSY-YDNEGMLTVVVSTQNPHYDRGEVAGMLALPNSKVRIIQATTGGG 238
Query: 836 FGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVL 895
FGGK S + A+ ++ +PV + R+ +S +RH K G T +G++
Sbjct: 239 FGGKLDLS--VQCHCALLTYHTKKPVKMVRSREESTTVSSKRHPMTMHCKTGATKDGRLQ 296
Query: 896 ALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGP 955
A+ +E++ + G AV+ RA H Y +PNVR+ +TN P + AFRGFG P
Sbjct: 297 AVQVEMFGDTGAYASYGPAVITRATVHCMGPYVVPNVRVDAKFVYTNNPMSGAFRGFGVP 356
Query: 956 QGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFP 1004
Q + E + +A + P +IR +N G+ L GQ L++
Sbjct: 357 QASVCHEGQMNALAKALGMDPIDIRILNAHQVGAKLATGQVLENSVGLI 405
|
| >1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A* Length = 769 | Back alignment and structure |
|---|
Score = 493 bits (1271), Expect = e-158
Identities = 172/795 (21%), Positives = 299/795 (37%), Gaps = 83/795 (10%)
Query: 601 TKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGAR 660
+VG + +VTG+A+YT D P+ L ++ S HARIL+ID S A
Sbjct: 5 LPQHGTVGVRTPLVDGVEKVTGKAKYTADIA-APDALVGRILRSPHAHARILAIDTSAAE 63
Query: 661 SSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKV 720
+ G + + + + P+ +E A + V G + V A A+ A +
Sbjct: 64 ALEGVIAVCTGAETPVPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALI 123
Query: 721 QVEYEELPAILSIQEAI--DAKSFHPN------TERCFRKGDVDICFQSGQCDKIIEGEV 772
+V+YE LPA ++ + A+ A + H + E GDV F + D I E
Sbjct: 124 KVDYEVLPAYMTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAFA--EADLIREKTY 181
Query: 773 RVGGQEHFYLEPHSSVVWTMDHGN-EVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKR 831
H ++E ++++ D + + ++TQ P V+ L + +++
Sbjct: 182 TFAEVNHVHMELNATLAE-YDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPF 240
Query: 832 IGGGFGGKET--RSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFT 889
+GGGFG + IA A V L R+ + R K K+G
Sbjct: 241 LGGGFGARTEALHFEIIAGLLAR---KAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLK 297
Query: 890 NEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAF 949
+GK+ AL LE G + + +Y IP ++ +TN P A
Sbjct: 298 KDGKIAALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAM 357
Query: 950 RGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSIL-HYGQQLQHCTLFPLWNE 1008
RG G E + + E+ +IR+IN + + Y Q++ + +
Sbjct: 358 RGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVPECLEK 417
Query: 1009 LKLSCDFLNARKEVDNFNLNNRWKKRGIAMV--PTKFGISFTLKLMNQAGALVHVYTDGT 1066
+K + + + ++ + + GIA+ + A + + DG
Sbjct: 418 VKAASGWEERKGKLP------KGRGLGIALSHFVSGTSTPKHWTGEPHATVNLKLDFDGG 471
Query: 1067 VLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGA 1126
+ + G ++GQG +T +QVAA + LS + V + P + + +S + + G
Sbjct: 472 ITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGN 531
Query: 1127 AVLDACEQIKARMEPIASKH----------------------NFNSFAELASACYVQRID 1164
A + A E++K + A+K SF E+ A V
Sbjct: 532 ASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGT 591
Query: 1165 LSAHGFYITPEIDFDWITGKGN---PFRYFTYGAAFAEVEIDTLTGDFH-TRMANVILDL 1220
++ G Y P +G+ F Y A E +D +TG ++ + D+
Sbjct: 592 ITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAV-DV 650
Query: 1221 GYSLNPAIDVGQIEGAFIQGLGWLAL-EELKWGDAAHKWIPPGCLYTCGPGSYKIPSLND 1279
G +LNP GQ +G G+G AL EE + + G + Y++P++ +
Sbjct: 651 GKALNPLAVEGQTQGGVWMGMGQ-ALSEETVYDN--------GRMVHGNILDYRVPTIVE 701
Query: 1280 VPLKFNVSLL----KGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGW 1335
P V ++ P +K E AI A +A G
Sbjct: 702 SP-DIEVIIVESMDPNGP-----FGAKEASEGMLAGFLP-------AIHEAVYEA--VGV 746
Query: 1336 FPLDNPATPERIRMA 1350
D P +P+RI
Sbjct: 747 RATDFPLSPDRITEL 761
|
| >3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B* Length = 305 | Back alignment and structure |
|---|
Score = 474 bits (1223), Expect = e-157
Identities = 135/305 (44%), Positives = 191/305 (62%), Gaps = 3/305 (0%)
Query: 262 PLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHV 321
L G + W + L+ LL+LK+++P++KL+VGNTE+GIEM+ K + ++I +
Sbjct: 3 QLRFEG-ERVTWIQASTLKELLDLKAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWI 61
Query: 322 PELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKN 381
PELN + +G+ GAA L+ + K + V + P +T + +EQ++WFAG Q+K+
Sbjct: 62 PELNAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKS 121
Query: 382 VASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEIL 441
VAS+GGNI TASPISDLNP++MASG K IV M FF YRK L EIL
Sbjct: 122 VASLGGNIITASPISDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEIL 181
Query: 442 LSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPL 501
LSI +P++R EF FKQA RR+DDIA V GMRV + V + L YGG+A
Sbjct: 182 LSIEIPYSREDEFFSAFKQASRREDDIAKVTCGMRVLFQPGS--MQVKELALCYGGMADR 239
Query: 502 SLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLW 561
++SA KT + K W+++LLQ+ L ++ L DAPGGM++FR++LTLSFFFKF+L
Sbjct: 240 TISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYLT 299
Query: 562 VSHQM 566
V ++
Sbjct: 300 VLKKL 304
|
| >1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1 Length = 788 | Back alignment and structure |
|---|
Score = 451 bits (1163), Expect = e-142
Identities = 191/803 (23%), Positives = 295/803 (36%), Gaps = 92/803 (11%)
Query: 604 GTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSP 663
GTSV E +RL +TG Y D + LH A + S HARI+SID + A++ P
Sbjct: 15 GTSVLRRE---DTRL-LTGRGRYIADLVLS-GMLHVASLRSPFAHARIVSIDVADAQALP 69
Query: 664 GFVGIFFAEDVQGDNRI--------GPVVADEELFASEVVTCVGQVIGVVVAETHEEAKL 715
G ++ DV ++ G + L A+ V VG+++ VVVA + A+
Sbjct: 70 GVELVWCGADVAELSQGIVATMQVEGFQTTIQPLLANGVTRFVGEIVAVVVASSRAIAED 129
Query: 716 ASRKVQVEYEELPAILSIQEAIDAKSF-HPN------TERCFRKGDVDICFQSGQCDKII 768
A++ +QVEYEELPA+ I+ A++ ++ + + + ++ F ++
Sbjct: 130 AAQLIQVEYEELPAVTGIEAALEGEARANDTLAGNVVSRTSRARDELAPIFA--SSAGVV 187
Query: 769 EGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCK 828
G+ G +E +V ++ + ++TQ P + V+ +P + +
Sbjct: 188 RGQFSCGRVSACPMETRGAVAQYEWTTQQLILWTATQMPSFVRTMVAMFCAIPEHLIEVR 247
Query: 829 TKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGF 888
+GGGFG K + S L RPV DR + + + + + F
Sbjct: 248 VPDVGGGFGQKAHLHPEELLVCLL-SRALGRPVRWIEDRQENFLGATHAKQQRNEMGLAF 306
Query: 889 TNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDN---VYEIPNVRIMGNVCFTNFPS 945
+G+ LAL+ + G +L L + + VY++P V TN
Sbjct: 307 DGDGRFLALENRSITDGGAYNNLPWTQLVESHVGNAVILGVYKVPAVSEESIAVATNKCP 366
Query: 946 NTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILH---YGQQLQHCTL 1002
A+RG G G + E I R A ++ SP EIR N GQ + T
Sbjct: 367 IGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRNVVMPEDFPFTNRLGQTHREGTY 426
Query: 1003 FPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAM------VPTKFGISFTLKLMNQAG 1056
N L+ + R+ ++ G+++ T+
Sbjct: 427 LQTINLLEEMVNPEAFRQRQAEARARGKYLGLGVSVFNEVTGTGTRTLSFLGTPTTTHDS 486
Query: 1057 ALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTA 1116
A V + G V VT GQG T +AQ+AA +P S V + ST
Sbjct: 487 ATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGVPASDVVIQAGSTK-NTYGFGAY 545
Query: 1117 ASASSDIYGAAVLDACEQIKARMEPIASKH----------------------NFNSFAEL 1154
AS + I ++ A ++ R++ +A FAE+
Sbjct: 546 ASRGAVIGAGSIGRAASIVRERVKQLAGHLLEAASEDIVIEDGLVHVAGVPAKGMPFAEV 605
Query: 1155 ASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFH-TRM 1213
A Y + + G A VEID T T
Sbjct: 606 VGAAYFADATHPP-----GFDATLEATATYDPSDLVLANGGHAAIVEIDASTYATRVTDF 660
Query: 1214 ANVILDLGYSLNPAIDVGQIEGAFIQGLGWLAL-EELKWGDAAHKWIPPGCLYTCGPGSY 1272
V D G +NP I GQI G Q +G L EE+ + D G L T Y
Sbjct: 661 FAVE-DCGTMINPMIVEGQIRGGIAQAIGQ-TLLEEVIYDDF-------GQLVTTTLMDY 711
Query: 1273 KIPSLNDVPLKFNVSLL----KGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARA 1328
IP+ DVP + L P K +GE A + A+ AA
Sbjct: 712 LIPTTLDVP-DIRIRHLETPSPLVP-----GGIKGMGESAMISAPA-------AVVAAVN 758
Query: 1329 DA-GHTGWFPLDNPATPERIRMA 1350
DA H P TPERI +
Sbjct: 759 DALAHLEVVIETVPITPERIFRS 781
|
| >1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B* Length = 809 | Back alignment and structure |
|---|
Score = 431 bits (1110), Expect = e-134
Identities = 177/807 (21%), Positives = 286/807 (35%), Gaps = 115/807 (14%)
Query: 620 VTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDN- 678
G+ Y DD P L V S HARI SID S A++ PG + A D++ N
Sbjct: 34 TQGKGNYVDDVK-LPGMLFGDFVRSSHAHARIKSIDTSKAKALPGVFAVLTAADLKPLNL 92
Query: 679 RIGPVVA--DEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEA 736
P +A + + A E V Q + VVA+ A A V+V+YE LP ++ +A
Sbjct: 93 HYMPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVLVDPFKA 152
Query: 737 I--DAKSFHP--------------NTERCFR-----KGDVDICFQSGQCDKIIEGEVRVG 775
+ DA + FR K D F + + + +
Sbjct: 153 MEPDAPLLREDIKDKMTGAHGARKHHNHIFRWEIGDKEGTDATFA--KAEVVSKDMFTYH 210
Query: 776 GQEHFYLEPHSSVVWTMDHGN-EVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGG 834
LE V MD E+ + + QAP + VS + GLP K+ IGG
Sbjct: 211 RVHPSPLETCQCVAS-MDKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIHVIAPDIGG 269
Query: 835 GFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKV 894
GFG K + A S +L PV DR ++ + + ++ T +GK+
Sbjct: 270 GFGNKVGAYSGYVCAVVA-SIVLGVPVKWVEDRMENLSTTSFARDYHMTTELAATKDGKI 328
Query: 895 LALDLEIYNNAGNSLDLSLAVLERAMFHS--DNVYEIPNVRIMGNVCFTN-FPSNTAFR- 950
LA+ + + G + A F + Y++P + + +TN A+R
Sbjct: 329 LAMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGGVAYRC 388
Query: 951 GFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILH---YGQQLQHCTLFPLWN 1007
F + + E I+ +A + ++R NF + G +
Sbjct: 389 SFRVTEAVYAIERAIETLAQRLEMDSADLRIKNFIQPEQFPYMAPLGWEYDSGNYPLAMK 448
Query: 1008 ELKLSCDFLNARKEVDNFNLNNRWKK----RGIAMV----PTKFGISFTLKLMN---QAG 1056
+ + + R E + + GI + G S ++
Sbjct: 449 KAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIGISFFTEIVGAGPSKNCDILGVSMFDS 508
Query: 1057 ALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTA 1116
A + ++ G+V+ G GQG T AQ+ A+ IP + + E +TD P T
Sbjct: 509 AEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDTAPYGLGTY 568
Query: 1117 ASASSDIYGAAVLDACEQIKARMEPIASKH----------------------NFNSFAEL 1154
S S+ GAA A +IKA+ + IA+ F + EL
Sbjct: 569 GSRSTPTAGAATAVAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGLPEKFKTMKEL 628
Query: 1155 ASACYVQRID-----LSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDF 1209
A A Y L A +Y P + +GA F ++ID TG
Sbjct: 629 AWASYNSPPPNLEPGLEAVNYYDPPN-------------MTYPFGAYFCIMDIDVDTGVA 675
Query: 1210 H-TRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLAL-EELKWGDAAHKWIPPGCLYTC 1267
R + D G +NP I GQ+ G + A+ +E+++ + G +
Sbjct: 676 KTRRFYALD-DCGTRINPMIIEGQVHGGLTEAFAV-AMGQEIRYDEQ-------GNVLGA 726
Query: 1268 GPGSYKIPSLNDVPLKFNVSLL----KGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAI 1323
+ +P+ + P K+ HP +K VGE P +A+
Sbjct: 727 SFMDFFLPTAVETP-KWETDYTVTPSPHHP-----IGAKGVGESPHVGGVP---CFSNAV 777
Query: 1324 SAARADAGHTGWFPLDNPATPERIRMA 1350
+ A A + P R+
Sbjct: 778 NDAYAFLNAG---HIQMPHDAWRLWKV 801
|
| >1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B* Length = 803 | Back alignment and structure |
|---|
Score = 427 bits (1101), Expect = e-133
Identities = 170/804 (21%), Positives = 276/804 (34%), Gaps = 112/804 (13%)
Query: 620 VTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR 679
+ G+ Y DD P LH +V + H RI I A + PG + AED++
Sbjct: 31 IQGKGNYVDDIK-MPGMLHMDIVRAPIAHGRIKKIHKDAALAMPGVHAVLTAEDLKPLKL 89
Query: 680 IGPVVADEE---LFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEA 736
+ + A E V Q + +V+A+ A A V+VEY+ELP ++ +A
Sbjct: 90 HWMPTLAGDVAAVLADEKVHFQMQEVAIVIADDRYIAADAVEAVKVEYDELPVVIDPIDA 149
Query: 737 I--DAKSFHPN-------------------TERCFRKGDVDICFQSGQCDKIIEGEVRVG 775
+ DA + T K D F + +
Sbjct: 150 LKPDAPVLREDLAGKTSGAHGPREHHNHIFTWGAGDKAATDAVFA--NAPVTVSQHMYYP 207
Query: 776 GQEHFYLEPHSSVVWTMDHGN-EVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGG 834
LE V D ++ ++QAP + VS + G+P SKV + IGG
Sbjct: 208 RVHPCPLETCGCVAS-FDPIKGDLTTYITSQAPHVVRTVVSMLSGIPESKVRIVSPDIGG 266
Query: 835 GFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKV 894
GFG K A S +L RPV DR ++ + + ++ T +GK+
Sbjct: 267 GFGNKVGIYPGYVCAIVA-SIVLGRPVKWVEDRVENISTTAFARDYHMDGELAATPDGKI 325
Query: 895 LALDLEIYNNAG--NSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFR-- 950
L L + + + G ++ Y+IP +TN
Sbjct: 326 LGLRVNVVADHGAFDACADPTKFPAGLFHICSGSYDIPRAHCSVKGVYTNKAPGGVAYXX 385
Query: 951 GFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILH---YGQQLQHCTLFPLWN 1007
F + + + E + +A ++ EIR NF + + +G +
Sbjct: 386 SFRVTEAVYLIERMVDVLAQKLNMDKAEIRAKNFIRKEQFPYTTQFGFEYDSGDYHTALK 445
Query: 1008 ELKLSCDFLNARKEVDNFNLNNRW-KKRGIAMV-------PTKFGISFTLKLMNQAGALV 1059
++ + D+ R E + GI +V + L + +
Sbjct: 446 KVLDAVDYPALRAEQAARRADPNSPTLMGIGLVTFTEVVGAGPSKMCDILGVGMFDSCEI 505
Query: 1060 HVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASA 1119
++ G+ + G + GQG T AQ+ A+ IP + V E T P T S
Sbjct: 506 RIHPTGSAIARMGTITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTSTAPYGLGTYGSR 565
Query: 1120 SSDIYGAAVLDACEQIKARMEPIASKH----------------------NFNSFAELASA 1157
S+ + GAA+ A +I A+ IA+ F + A++A
Sbjct: 566 STPVAGAAIALAARKIHAKARKIAAHMLEVNENDLDWEVDRFKVKGDDSKFKTMADIAWQ 625
Query: 1158 CYVQRID-----LSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFH-T 1211
Y Q L A +Y P + +G V+ID TG+
Sbjct: 626 AYHQPPAGLEPGLEAVHYYDPPN-------------FTYPFGIYLCVVDIDRATGETKVR 672
Query: 1212 RMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLAL-EELKWGDAAHKWIPPGCLYTCGPG 1270
R + D G +NP I GQI G +G A+ +++ + G L
Sbjct: 673 RFYALD-DCGTRINPMIIEGQIHGGLTEGYAV-AMGQQMPFDAQ-------GNLLGNTLM 723
Query: 1271 SYKIPSLNDVPLKFNVSLL----KGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAA 1326
Y +P+ + P + HP +K V E P + A+ A
Sbjct: 724 DYFLPTAVETP-HWETDHTVTPSPHHP-----IGAKGVAESPHVGSIP---TFTAAVVDA 774
Query: 1327 RADAGHTGWFPLDNPATPERIRMA 1350
A G T LD P T R+ +
Sbjct: 775 FAHVGVT---HLDMPHTSYRVWKS 795
|
| >3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri} Length = 330 | Back alignment and structure |
|---|
Score = 302 bits (776), Expect = 5e-93
Identities = 92/343 (26%), Positives = 141/343 (41%), Gaps = 44/343 (12%)
Query: 1032 KKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASA 1091
KKRG + +GI T L N A A V ++ DG+ V G ++GQG T +AQ+AA
Sbjct: 2 KKRGKGVGSMWYGIGNT-GLPNPAAAFVEIHGDGSANVMFGAADIGQGSGTAMAQIAAEE 60
Query: 1092 FNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH----- 1146
+ + V+ T P+ T+AS + I G AV+ AC Q K + A++
Sbjct: 61 LGLDYEKIHVTWGDTMVTPDGGATSASRQTLITGNAVILACRQAKETLAKTAAEKLDCAP 120
Query: 1147 ---NFN--------------SFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFR 1189
+F ++ EL +A G Y G PF
Sbjct: 121 EELSFRDNTVFITADPERSMTYGELMAAMKAAGRMAVGAGSYNPNTTGLAPENMSGIPFE 180
Query: 1190 YFTYGAAFAEVEIDTLTGDFH-TRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEE 1248
++Y AEVE+DT TG+ ++ + D+G +N ++ GQIEG G G++ +EE
Sbjct: 181 VYSYATTIAEVEVDTETGEVDVLKVVSAH-DVGTPINRSMVEGQIEGGVTMGQGFVLMEE 239
Query: 1249 LKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPP 1308
++ G + Y IPS DVP + + L++ +K VGEP
Sbjct: 240 IEVNTKN------GAIKNPSMSKYIIPSNRDVP-EIHSILVE-SEGGPGPFGAKGVGEPA 291
Query: 1309 FFL-ASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMA 1350
+V AI+DA+ P P+ I A
Sbjct: 292 LIPMIPAVVAAIEDALGTRFTHT----------PIMPKDIVAA 324
|
| >3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A* Length = 164 | Back alignment and structure |
|---|
Score = 286 bits (734), Expect = 1e-89
Identities = 95/165 (57%), Positives = 121/165 (73%), Gaps = 3/165 (1%)
Query: 18 TKEAI-LYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKK 75
T + + +VNG + V + TLL YLR +GL GTKLGCGEGGCGACTVM+S+YD+
Sbjct: 1 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRL 60
Query: 76 SKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFI 135
K +H + NACLAP+ +L + V TVEG+G+ K LHP+QE + +SHGSQCGFCTPG +
Sbjct: 61 QDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIV 120
Query: 136 MSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
MSMY+LLR+ PT E+IE++ GNLCRCTGYRPI+ FR FAK
Sbjct: 121 MSMYTLLRNQPE-PTVEEIEDAFQGNLCRCTGYRPILQGFRTFAK 164
|
| >3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri} Length = 296 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 2e-57
Identities = 65/302 (21%), Positives = 127/302 (42%), Gaps = 19/302 (6%)
Query: 272 KWYRPLKLQHLLELKSKYPDS--KLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNV 329
+++ P L+ L +Y D ++ G T++ IE+ + + V+I + + EL + V
Sbjct: 5 EFFAPKTLEEAKGLLHQYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRV 64
Query: 330 KDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNI 389
+++ + IGA T++ + +A + QI+N+ ++GGN+
Sbjct: 65 EENTIHIGALSTFTQIEN--HPFIRSH-------VRALYKAASQVGSPQIRNLGTIGGNL 115
Query: 390 CTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLG---YRKVDLTSGEILLSIFL 446
T+S D A + +G R +FF G R+ L + EI+ + +
Sbjct: 116 STSSVAGDGVSAMTTLDATVVLESVRG-TRQMKLTDFFDGEGFKRRNALEADEIMTEVII 174
Query: 447 PWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAK 506
+K A R+ I+++ GM V +++ V + A + G + L K
Sbjct: 175 DRPDAHSASAFYKLAKRKSLAISVIGGGMAVKVDDAG---VCTWASMRGGCIGRYPLHFK 231
Query: 507 KTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQM 566
+ + +VG + E ++ L IL + A V ++K F K F+ + Q+
Sbjct: 232 QAEEMLVGAPLTMETMEATLPILHDTVYDMARARPS-VLYKKESVQGVFKKLFVDILDQL 290
Query: 567 EG 568
EG
Sbjct: 291 EG 292
|
| >1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A* Length = 166 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 5e-55
Identities = 57/154 (37%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 23 LYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVH 81
L +NG V L+ ++R+ LTG +GC CGACTV + D
Sbjct: 8 LTING-HPVEALVEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTVDL---DGM------ 57
Query: 82 CAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSL 141
+V +C G + T+EG+ L +QE HG QCG+CTPG IM + L
Sbjct: 58 -SVKSCTMFAVQANGASITTIEGMAAPDGTLSALQEGFRMMHGLQCGYCTPGMIMRSHRL 116
Query: 142 LRSSQTP-PTEEQIEESLAGNLCRCTGYRPIVDA 174
L+ + P PTE +I + GNLCRCTGY+ IV A
Sbjct: 117 LQ--ENPSPTEAEIRFGIGGNLCRCTGYQNIVKA 148
|
| >3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri} Length = 160 | Back alignment and structure |
|---|
Score = 186 bits (476), Expect = 9e-55
Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 23 LYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVH 81
L +NG + LL+ LR+ GLT K GC EG CGACTV+ +
Sbjct: 8 LNLNG-EARSIVTEPNKRLLDLLREDFGLTSVKEGCSEGECGACTVIF---NGD------ 57
Query: 82 CAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSL 141
V C + +IT+EGV +Q+ + + QCG+CTPG I++ +L
Sbjct: 58 -PVTTCCMLAGQADESTIITLEGVAE-DGKPSLLQQCFLEAGAVQCGYCTPGMILTAKAL 115
Query: 142 LRSSQTP-PTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
L + P PT+E+I +++GNLCRCTGY I A R +
Sbjct: 116 LD--KNPDPTDEEITVAMSGNLCRCTGYIKIHAAVRYAVE 153
|
| >1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C* Length = 161 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 4e-54
Identities = 66/165 (40%), Positives = 92/165 (55%), Gaps = 17/165 (10%)
Query: 19 KEAI-LYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKS 76
K + L +NG R ++ LL+YLR+ +GLTGTK GC G CGACTV+V D +
Sbjct: 2 KNILRLTLNG-RAREDLVPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLV---DDR- 56
Query: 77 KKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIM 136
AC + + G V TVE + + L +Q + G+QCGFCTPG IM
Sbjct: 57 ------PRLACSTLAHQVAGKKVETVESLAT-QGTLSKLQAAFHEKLGTQCGFCTPGMIM 109
Query: 137 SMYSLLRSSQTP-PTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
+ +LLR + P P+ ++I+ +LAGNLCRCTGY I+ + A
Sbjct: 110 ASEALLR--KNPSPSRDEIKAALAGNLCRCTGYVKIIKSVETAAA 152
|
| >1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2 Length = 168 | Back alignment and structure |
|---|
Score = 183 bits (468), Expect = 1e-53
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 14/172 (8%)
Query: 10 MEQMGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVM 68
M+ E +NG + + + L + LR+ +GLTGTK+GC +G CG+CT++
Sbjct: 1 MQAHEESQLMRISATING-KPRVFYVEPRMHLADALREVVGLTGTKIGCEQGVCGSCTIL 59
Query: 69 VSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCG 128
+ D + +CL EG + TVEG+ L+ +Q+S R H QCG
Sbjct: 60 I---DGA-------PMRSCLTLAVQAEGCSIETVEGLSQ-GEKLNALQDSFRRHHALQCG 108
Query: 129 FCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180
FCT G + + S+L + P+ +++ E ++GNLCRCTGY I+DA A
Sbjct: 109 FCTAGMLATARSILAENPA-PSRDEVREVMSGNLCRCTGYETIIDAITDPAV 159
|
| >1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A* Length = 163 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 2e-53
Identities = 62/154 (40%), Positives = 84/154 (54%), Gaps = 16/154 (10%)
Query: 23 LYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVH 81
+ VNG + L+ +LR+ + LTG +GC CGACTV + D +
Sbjct: 8 VNVNG-KAQEKAVEPRTLLIHFLREELNLTGAHIGCETSHCGACTVDI---DGR------ 57
Query: 82 CAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSL 141
+V +C +G V+TVEG+ N K LH +QE + HG QCGFCTPG +M Y
Sbjct: 58 -SVKSCTHLAVQCDGSEVLTVEGLAN-KGVLHAVQEGFYKEHGLQCGFCTPGMLMRAYRF 115
Query: 142 LRSSQTP-PTEEQIEESLAGNLCRCTGYRPIVDA 174
L+ + P PTE +I + GNLCRCTGY+ IV A
Sbjct: 116 LQ--ENPNPTEAEIRMGMTGNLCRCTGYQNIVKA 147
|
| >1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3 Length = 288 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 5e-53
Identities = 58/277 (20%), Positives = 111/277 (40%), Gaps = 18/277 (6%)
Query: 274 YRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDG 333
P LQ ++++ + PD++++ G + + + + L+ + +V EL ++
Sbjct: 9 RAPASLQEVIQVLADDPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGI 68
Query: 334 LEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 393
L +GA V V + + + A ++N ++GG++ A
Sbjct: 69 LSVGAMVTHFRNKT--DPTVAKC-------VPILPKVLAHVAHQAVRNRGTLGGSLAHAD 119
Query: 394 PISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFE 453
+++ L GA +I G R+ A +F G+ DL +GE+L+ + +P
Sbjct: 120 AGAEMPFLMATLGATMYIASSAGV-RSVSATDFMKGHYFTDLEAGEVLVRVEIPIPALHW 178
Query: 454 FVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIV 513
E+ RR D ALV A + ++ A + G V + A + F+V
Sbjct: 179 EFDEYA---RRKGDYALVMAAAGLSMQGG----RCVAARIALGAVEERAHQAIRANDFLV 231
Query: 514 GKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSL 550
GK + A ++ + + D G D R SL
Sbjct: 232 GKVIDESTAATAAELATEGLEPRSDIHGS-RDLRLSL 267
|
| >1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C* Length = 288 | Back alignment and structure |
|---|
Score = 178 bits (455), Expect = 3e-50
Identities = 52/281 (18%), Positives = 107/281 (38%), Gaps = 21/281 (7%)
Query: 273 WYRPLKLQHLLELKSKY-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKD 331
++RP + + L +K D++ L G + M+ + + L+ + + +L + +
Sbjct: 8 YHRPKSIADAVALLTKLGEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEG 67
Query: 332 DGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT 391
+ IGA L+ + + E A QI+ + ++GGN
Sbjct: 68 TDVVIGAMTTQHALIG--SDFLAAK-------LPIIRETSLLIADPQIRYMGTIGGNAAN 118
Query: 392 ASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRP 451
P +D+ L GA + + +G R A +++ G + GE+L +I +P
Sbjct: 119 GDPGNDMPALMQCLGAAYELTGPEGA-RIVAARDYYQGAYFTAIEPGELLTAIRIPVPPT 177
Query: 452 FE--FVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTK 509
++ K R+ D A A + + + A + VA L A++
Sbjct: 178 GHGYAYEKLK---RKIGDYATAAAAVVLTMSGG----KCVTASIGLTNVANTPLWAEEAG 230
Query: 510 TFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSL 550
+VG + + L A+ + + D G ++R +
Sbjct: 231 KVLVGTALDKPALDKAVALAEAITAPASDGRGP-AEYRTKM 270
|
| >1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C* Length = 287 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 5e-50
Identities = 67/280 (23%), Positives = 117/280 (41%), Gaps = 21/280 (7%)
Query: 274 YRPLKLQHLLELKSKY-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDD 332
+ P + + L + D+KLL G + M+L+ Q + LI + +PEL + +
Sbjct: 9 HAPKSVGEAVALLGQLGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGS 68
Query: 333 GLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 392
+ IGA +L+ +V R E K A Q++N ++GG+I
Sbjct: 69 TVVIGAMTVENDLIS--SPIVQAR-------LPLLAEAAKLIADPQVRNRGTIGGDIAHG 119
Query: 393 SPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPF 452
P +D L +A A F + G RT A+ FFLG L E+++ I +P
Sbjct: 120 DPGNDHPALSIAVEAHFVLEGPNGR-RTVPADGFFLGTYMTLLEENEVMVEIRVPAFAQG 178
Query: 453 E--FVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKT 510
++ K R+ D A + + VS + VAP +L A+ +
Sbjct: 179 TGWAYEKLK---RKTGDWATAGCAVVMRKSGN----TVSHIRIALTNVAPTALRAEAAEA 231
Query: 511 FIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSL 550
++GK++++E +Q A ED G D++ ++
Sbjct: 232 ALLGKAFTKEAVQAAADAAIAICEPAEDLRGD-ADYKTAM 270
|
| >1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B* Length = 324 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 2e-28
Identities = 54/319 (16%), Positives = 101/319 (31%), Gaps = 60/319 (18%)
Query: 273 WYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDD 332
+RP L + + + L T++ +R L+ +T + L ++ D
Sbjct: 9 THRPATLADAVNALAA-EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLAD 67
Query: 333 G-LEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNI-- 389
G L IGA L + + + A + + AG + A++GGN+
Sbjct: 68 GSLRIGAGATLEAIAE--HDAIRTT-------WPALAQAAESVAGPTHRAAATLGGNLCQ 118
Query: 390 ------------------------------------CTASPISDLNPLWMASGAKFHIVD 413
C A+ D+ P M A+ IV
Sbjct: 119 DTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRCYATYHGDVAPALMVLDARAEIVG 178
Query: 414 CKGNIRTTMAEEFFL--GYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALV 471
G RT + F G + L GE+L +I +P T + K R D L
Sbjct: 179 PAGK-RTVPVAQLFRESGAEHLTLEKGELLAAIEVPPTGAWSAAYS-KVRIRDAVDFPLA 236
Query: 472 NAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQT 531
+ + ++ + G L ++G +W + ++++
Sbjct: 237 GVAAALQRDGD----RIAGLRVAITGSNSAPLMV--PVDALLGGNWDDAAAETLAQLVRK 290
Query: 532 DIILKEDAPGGMVDFRKSL 550
+ G V +R+ +
Sbjct: 291 TSNVLRTTITG-VKYRRRV 308
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 74.5 bits (182), Expect = 2e-13
Identities = 78/491 (15%), Positives = 146/491 (29%), Gaps = 146/491 (29%)
Query: 430 YRKVDLTSGEI------LLSIFLPWTRPFEFVKEFKQAHRRD-----------DDIALV- 471
+ +D +GE +LS+F FV F +D D I +
Sbjct: 4 HHHMDFETGEHQYQYKDILSVFED-----AFVDNFDCKDVQDMPKSILSKEEIDHIIMSK 58
Query: 472 NAGMRVY-----LEEKDEEWV---VSDALLV-YGGVA-PLSLSAK----KTKTFI--VGK 515
+A L K EE V V + L + Y + P+ + T+ +I +
Sbjct: 59 DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118
Query: 516 SWS--QEL-------------LQNALKILQ--TDIILKEDAPGGMVDFRKS-LTLS---- 553
++ Q L+ AL L+ ++++ G++ K+ + L
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID-----GVLGSGKTWVALDVCLS 173
Query: 554 ------FFFKFFLWVSHQMEGKNSIKESVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSV 607
FK F W++ + E+V L +Q Y+I + TS
Sbjct: 174 YKVQCKMDFKIF-WLNL---KNCNSPETV----LEMLQKLL---------YQIDPNWTSR 216
Query: 608 GSPEVHLSSRL-QVTGEAEYTDDTPMPPNCLHAALVL----SRR------PHARIL---- 652
++ R+ + E + NCL LVL + + +IL
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCL---LVLLNVQNAKAWNAFNLSCKILLTTR 273
Query: 653 --SIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADE--ELFAS-----------EVVTC 697
+ D F+ + D+ + DE L EV+T
Sbjct: 274 FKQVTD--------FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT 325
Query: 698 VGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQ-EAIDAKSFHPNTERC--FRKGD 754
+ + ++ + V ++L I+ ++ + +R F
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP-S 384
Query: 755 VDICFQSGQCDKIIEGEVRVGGQEHFYLEPHS-SVV--WTMDHGNEVHMI------SSTQ 805
I +I +V + H S+V + + I
Sbjct: 385 AHI---PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN 441
Query: 806 APQKHQKYVSH 816
H+ V H
Sbjct: 442 EYALHRSIVDH 452
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 6e-09
Identities = 92/557 (16%), Positives = 167/557 (29%), Gaps = 194/557 (34%)
Query: 69 VSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITVEGV-GNRKHGLHPIQESLVRSHGSQC 127
VSR K + L L + ++GV G+ K + + S+ QC
Sbjct: 131 VSRLQPYLK------LRQAL---LELRPAKNVLIDGVLGSGKTWV---ALDVCLSYKVQC 178
Query: 128 GF------------CTPGFIMSMYSLLRSSQTPPTEEQIE---------ESLAGNLCRCT 166
+P ++ M L P + + S+ L R
Sbjct: 179 KMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 167 GYRP---------------IVDAFRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCG 211
+P +AF + K L T T
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLSCKI---LLT----------------T------- 272
Query: 212 MKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIF-----------PPELLLRKS 260
+ D ++ T T E + + P E+L +
Sbjct: 273 -RFKQVTD----FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL--TT 325
Query: 261 NPLNLSGFGGLK------W--YRPL---KLQHLLE--LKSKYPDSKLLVGNTEVGIEMRL 307
NP LS W ++ + KL ++E L P E
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA------------EY-- 371
Query: 308 KRMQYQVLISV----THVPE--LNVL---NVKDDGLEIGAAVRLTELLKMFRKVVTERPA 358
R + L SV H+P L+++ +K D + + + +L K +V ++P
Sbjct: 372 -RKMFDRL-SVFPPSAHIPTILLSLIWFDVIKSDVMVV-----VNKLHK--YSLVEKQPK 422
Query: 359 HETSSCKAFIEQIKWFAGTQIKNVASV------GGNICTASPISDLNPLWMAS------G 406
T S + ++K +++N ++ NI DL P ++ G
Sbjct: 423 ESTISIPSIYLELK----VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG 478
Query: 407 AKFHIVDCKGNIRTTMAEEFFLGYR----KVDLTSGEILLSIFLPWTRP---------FE 453
H+ + + R T+ FL +R K+ S W +
Sbjct: 479 --HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDS--------TAWNASGSILNTLQQLK 528
Query: 454 FVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIV 513
F K + + + LVNA + +L + +E + S Y + ++L A+
Sbjct: 529 FYKPYICDNDPKYE-RLVNAILD-FLPKIEENLICSK----YTDLLRIALMAE------- 575
Query: 514 GKSWSQELLQNALKILQ 530
+ + + A K +Q
Sbjct: 576 ----DEAIFEEAHKQVQ 588
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 1e-08
Identities = 89/607 (14%), Positives = 162/607 (26%), Gaps = 228/607 (37%)
Query: 8 EEMEQMGEGWTKEAI------------LYV-------NGLRKVLPDGLAHLTLLEYLRDI 48
EE+ ++ + I +Y+ N + ++ L LR
Sbjct: 84 EEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ- 142
Query: 49 GLTGTKLG-----CGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLE-----GMH 98
L + G G G K V A++ CL+ Y ++ +
Sbjct: 143 ALLELRPAKNVLIDGVLGSG-------------KTWV--ALDVCLS--YKVQCKMDFKIF 185
Query: 99 VITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTE-EQIEES 157
+ + N + + + L + + S S I+
Sbjct: 186 WLNL-KNCNSPETVLEMLQKL--LYQIDPNWT---------SRSDHSSNIKLRIHSIQAE 233
Query: 158 LAGNLCRCTGYRP------------IVDAFRVFAKTNDALYTNMSSMSLKEGEFVCPSTG 205
L L + Y +AF + K L T T
Sbjct: 234 LR-RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKI---LLT----------------T- 272
Query: 206 KPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIF-----------PPE 254
+ D ++ T T E + + P E
Sbjct: 273 -------RFKQVTD----FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321
Query: 255 LLLRKSNPLNLSGFGGLK------W--YRPL---KLQHLLE--LKSKYPDSKLLVGNTEV 301
+L +NP LS W ++ + KL ++E L P
Sbjct: 322 VL--TTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA---------- 369
Query: 302 GIEMRLKRMQYQVLISV----THVPE--LNVL---NVKDDGLEIGAAVRLTELLKMFRKV 352
E R + L SV H+P L+++ +K D + + + +L K +
Sbjct: 370 --EYR---KMFDRL-SVFPPSAHIPTILLSLIWFDVIKSDVMVV-----VNKLHK--YSL 416
Query: 353 VTERPAHETSSCKAFIEQIKWFAGTQIKNVASV------GGNICTASPISDLNPLWMASG 406
V ++P T S + ++K +++N ++ NI DL P ++
Sbjct: 417 VEKQPKESTISIPSIYLELK----VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYL-DQ 471
Query: 407 AKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDD 466
+ +G+ L E + F+
Sbjct: 472 YFYS----------------HIGHH--------------LKNIEHPERMTLFR------- 494
Query: 467 DIALVNAGMRVYLEEKDEEWV------VSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQE 520
V+L D ++ S A G + K K +I E
Sbjct: 495 ---------MVFL---DFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYE 542
Query: 521 LLQNALK 527
L NA+
Sbjct: 543 RLVNAIL 549
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 2e-06
Identities = 69/490 (14%), Positives = 136/490 (27%), Gaps = 162/490 (33%)
Query: 663 PGFVGIFFAEDVQGDNRIGPVVADEE----LFASEVVTCVGQVIGVVVAETHEEAK---- 714
FV F +DVQ + +++ EE + + + V+ ++ ++++ E +
Sbjct: 27 DAFVDNFDCKDVQDMPK--SILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE 84
Query: 715 ---------LASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCD 765
L S ++ E + P+ + + I+ + N + F K +V +
Sbjct: 85 EVLRINYKFLMSP-IKTEQRQ-PS-MMTRMYIEQRDRLYNDNQVFAKYNVS------RLQ 135
Query: 766 KIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKV 825
++ +R E L P +V+ G ++ S K ++
Sbjct: 136 PYLK--LRQALLE---LRPAKNVLI---DG----VLGSG-------KTW-------VALD 169
Query: 826 VCKTKRIGGGFGGK-------ETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRH 878
VC + ++ K S P +L L D + S H
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNS---------PETVLEMLQKLLYQIDPNW-TSRSDH 219
Query: 879 SFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNV 938
S K ++ L + Y N L VL NV
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYEN-------CLLVL-------LNVQNAKAWNAFNLS 265
Query: 939 C----FTNFPSNTAF---------------RGFGGPQGMLITENWIQRVAVEVRKSPEEI 979
C T F T F + + ++ + P E+
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD---CRPQDLPREV 322
Query: 980 REINFQGEGSI--------------LHYG---------------------QQLQHCTLFP 1004
N + I H + ++FP
Sbjct: 323 LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382
Query: 1005 ------------LWNELKLSC--DFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLK 1050
+W ++ S +N ++ ++L + K +P I LK
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDVMVVVN---KLHKYSLVEKQPKESTISIP---SIYLELK 436
Query: 1051 LMNQAGALVH 1060
+ + +H
Sbjct: 437 VKLENEYALH 446
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1370 | ||||
| d1v97a5 | 638 | d.133.1.1 (A:695-1332) Xanthine oxidase, C-termina | 1e-150 | |
| d1jrob2 | 654 | d.133.1.1 (B:124-777) Xanthine dehydrogenase chain | 1e-147 | |
| d1n62b2 | 663 | d.133.1.1 (B:147-809) Carbon monoxide (CO) dehydro | 1e-102 | |
| d1ffvb2 | 657 | d.133.1.1 (B:147-803) Carbon monoxide (CO) dehydro | 1e-102 | |
| d1t3qb2 | 621 | d.133.1.1 (B:166-786) Quinoline 2-oxidoreductase l | 1e-100 | |
| d1vlba4 | 597 | d.133.1.1 (A:311-907) Aldehyde oxidoreductase {Des | 8e-94 | |
| d1rm6a2 | 636 | d.133.1.1 (A:134-769) 4-hydroxybenzoyl-CoA reducta | 7e-92 | |
| d1dgja4 | 596 | d.133.1.1 (A:311-906) Aldehyde oxidoreductase {Des | 1e-89 | |
| d1v97a6 | 223 | d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 ( | 1e-53 | |
| d1v97a3 | 158 | d.41.1.1 (A:537-694) Xanthine oxidase, domain 5 (? | 6e-35 | |
| d1v97a4 | 114 | d.87.2.1 (A:415-528) Xanthine oxidase, domain 4 (? | 3e-31 | |
| d1jroa4 | 167 | d.145.1.3 (A:179-345) Xanthine dehydrogenase chain | 1e-30 | |
| d1jrob1 | 122 | d.41.1.1 (B:2-123) Xanthine dehydrogenase chain B, | 1e-30 | |
| d1t3qc2 | 176 | d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase med | 7e-30 | |
| d1v97a1 | 73 | a.56.1.1 (A:93-165) Xanthine oxidase, domain 2 {Co | 1e-28 | |
| d1rm6b2 | 216 | d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase | 2e-28 | |
| d1ffvc2 | 177 | d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydroge | 4e-28 | |
| d1v97a2 | 90 | d.15.4.2 (A:3-92) Xanthine oxidase, N-terminal dom | 6e-27 | |
| d1rm6a1 | 125 | d.41.1.1 (A:9-133) 4-hydroxybenzoyl-CoA reductase | 4e-26 | |
| d1n62b1 | 141 | d.41.1.1 (B:6-146) Carbon monoxide (CO) dehydrogen | 2e-25 | |
| d1t3qb1 | 165 | d.41.1.1 (B:1-165) Quinoline 2-oxidoreductase larg | 3e-25 | |
| d1n62c2 | 177 | d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydroge | 3e-25 | |
| d1ffvb1 | 140 | d.41.1.1 (B:7-146) Carbon monoxide (CO) dehydrogen | 4e-24 | |
| d1vlba3 | 117 | d.41.1.1 (A:194-310) Aldehyde oxidoreductase, doma | 5e-24 | |
| d1t3qa1 | 81 | a.56.1.1 (A:88-168) Quinoline 2-oxidoreductase sma | 7e-24 | |
| d1ffva1 | 76 | a.56.1.1 (A:82-157) Carbon monoxide (CO) dehydroge | 1e-22 | |
| d1rm6c1 | 76 | a.56.1.1 (C:82-157) 4-hydroxybenzoyl-CoA reductase | 2e-22 | |
| d1jroa1 | 82 | a.56.1.1 (A:85-166) Xanthine dehydrogenase chain A | 1e-21 | |
| d1jroa2 | 84 | d.15.4.2 (A:1-84) Xanthine dehydrogenase chain A, | 3e-21 | |
| d1n62a1 | 82 | a.56.1.1 (A:82-163) Carbon monoxide (CO) dehydroge | 5e-21 | |
| d1vlba1 | 113 | a.56.1.1 (A:81-193) Aldehyde oxidoreductase, domai | 9e-19 | |
| d1jroa3 | 117 | d.87.2.1 (A:346-462) Xanthine dehydrogenase chain | 3e-17 | |
| d1rm6c2 | 81 | d.15.4.2 (C:1-81) 4-hydroxybenzoyl-CoA reductase g | 3e-17 | |
| d1n62a2 | 79 | d.15.4.2 (A:3-81) Carbone monoxide (CO) dehydrogen | 2e-16 | |
| d1ffva2 | 79 | d.15.4.2 (A:3-81) Carbone monoxide (CO) dehydrogen | 3e-16 | |
| d1t3qa2 | 81 | d.15.4.2 (A:7-87) Quinoline 2-oxidoreductase small | 5e-16 | |
| d1dgja2 | 80 | d.15.4.2 (A:1-80) Aldehyde oxidoreductase, N-termi | 3e-15 | |
| d1vlba2 | 80 | d.15.4.2 (A:1-80) Aldehyde oxidoreductase, N-termi | 1e-14 | |
| d1t3qc1 | 109 | d.87.2.1 (C:177-285) Quinoline 2-oxidoreductase me | 5e-13 | |
| d1n62c1 | 109 | d.87.2.1 (C:178-286) Carbon monoxide (CO) dehydrog | 9e-12 | |
| d1ffvc1 | 110 | d.87.2.1 (C:178-287) Carbon monoxide (CO) dehydrog | 3e-10 | |
| d1rm6b1 | 107 | d.87.2.1 (B:217-323) 4-hydroxybenzoyl-CoA reductas | 7e-04 |
| >d1v97a5 d.133.1.1 (A:695-1332) Xanthine oxidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 638 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Xanthine oxidase, C-terminal domain species: Cow (Bos taurus) [TaxId: 9913]
Score = 468 bits (1204), Expect = e-150
Identities = 319/637 (50%), Positives = 432/637 (67%), Gaps = 13/637 (2%)
Query: 730 ILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVV 789
I++I++AI SF+ + E KGD+ F + D ++ GE+ +GGQ+HFYLE H ++
Sbjct: 1 IITIEDAIKNNSFYGS-ELKIEKGDLKKGFS--EADNVVSGELYIGGQDHFYLETHCTIA 57
Query: 790 WTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAA 849
E+ + STQ K Q +V+ +LG+P+++++ + KR+GGGFGGKETRS ++ A
Sbjct: 58 IPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTLVSVA 117
Query: 850 AAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSL 909
A+ ++ PV LDR+ DM+I+G RH FL +YKVGF G ++AL+++ Y+NAGNS
Sbjct: 118 VALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSR 177
Query: 910 DLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVA 969
DLS +++ERA+FH DN Y+IPN+R G +C TN SNTAFRGFGGPQ + I ENW+ VA
Sbjct: 178 DLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVA 237
Query: 970 VEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNN 1029
V EE+R N EG + H+ Q+L+ ++ W+E S + + EVD FN N
Sbjct: 238 VTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKFNKEN 297
Query: 1030 RWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAA 1089
WKKRG+ ++PTKFGISFT+ +NQAGAL+HVYTDG+VLV+HGG EMGQGLHTK+ QVA+
Sbjct: 298 CWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVAS 357
Query: 1090 SAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFN 1149
A IP+S +++SETST+ VPN+SPTAAS S+DIYG AV +AC+ I R+EP K+
Sbjct: 358 KALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKKNPDG 417
Query: 1150 SFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDF 1209
S+ + A Y R+ LS GFY TP + + + T GN F YFTYG A +EVEID LTGD
Sbjct: 418 SWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDH 477
Query: 1210 HTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGP 1269
++++D+G SLNPAID+GQ+EGAF+QGLG LEEL + G L+T GP
Sbjct: 478 KNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYSPE-------GSLHTRGP 530
Query: 1270 GSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARAD 1329
+YKIP+ +P +F VSLL+ PN KAI++SKAVGEPP FL +SVFFAIKDAI AARA
Sbjct: 531 STYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRAARAQ 590
Query: 1330 A---GHTGWFPLDNPATPERIRMACLDEFTAPFINSE 1363
F LD+PATPE+IR AC+D+FT +
Sbjct: 591 HTNNNTKELFRLDSPATPEKIRNACVDKFTTLCVTGA 627
|
| >d1jrob2 d.133.1.1 (B:124-777) Xanthine dehydrogenase chain B, C-terminal domain {Rhodobacter capsulatus [TaxId: 1061]} Length = 654 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Xanthine dehydrogenase chain B, C-terminal domain species: Rhodobacter capsulatus [TaxId: 1061]
Score = 460 bits (1184), Expect = e-147
Identities = 275/663 (41%), Positives = 364/663 (54%), Gaps = 55/663 (8%)
Query: 728 PAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSS 787
PAIL++ +A+ A S + +GDV+ + EG +GGQEHFYLE ++
Sbjct: 1 PAILTLDQALAADSRFEGGPVIWARGDVETALA--GAAHLAEGCFEIGGQEHFYLEGQAA 58
Query: 788 VVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIA 847
+ V + S+Q P + Q V+H LGL V + +R+GGGFGGKE++ +A
Sbjct: 59 LAL--PAEGGVVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKESQGNHLA 116
Query: 848 AAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGN 907
A AV + RP + DRD DM+I+G+RH F +Y++G GK+L D G
Sbjct: 117 IACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGW 176
Query: 908 SLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQR 967
S DLSL V +RAM H+D Y +P +RI + TN SNTAFRGFGGPQG L E I+
Sbjct: 177 SADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEH 236
Query: 968 VAVEVRKSPEEIREINF--------------------QGEGSILHYGQQLQHCTLFPLWN 1007
+A + + P E+R +NF + HYGQ++ C L L
Sbjct: 237 LARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQEVADCVLGELVT 296
Query: 1008 ELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTV 1067
L+ S +F R E+ +N NR RGIA+ P KFGISFTL +NQAGALV +YTDG+V
Sbjct: 297 RLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDGSV 356
Query: 1068 LVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAA 1127
+ HGG EMGQGLH K+ QVAA+ I V ++ T T KVPN S TAAS+ +D+ G A
Sbjct: 357 ALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNGMA 416
Query: 1128 VLDACEQIKARMEPIASKH-------------------NFNSFAELASACYVQRIDLSAH 1168
V DACE ++ R+ + FAE+ +A Y+ RI LSA
Sbjct: 417 VKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLSAT 476
Query: 1169 GFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAI 1228
GFY TP++ +D + G+G PF YF YGAA EV ID LTG+ +++ D G SLNPA+
Sbjct: 477 GFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNPAL 536
Query: 1229 DVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSL 1288
D+GQIEGA++QG GWL EEL W G L T P +YKIP+ +D P FNV+L
Sbjct: 537 DIGQIEGAYVQGAGWLTTEELVWDHC-------GRLMTHAPSTYKIPAFSDRPRIFNVAL 589
Query: 1289 LKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIR 1348
+ I SKAVGEPPF L S F A+ DA +A W L PATPE +
Sbjct: 590 WDQPNREETIFRSKAVGEPPFLLGISAFLALHDACAACGPH-----WPDLQAPATPEAVL 644
Query: 1349 MAC 1351
A
Sbjct: 645 AAV 647
|
| >d1n62b2 d.133.1.1 (B:147-809) Carbon monoxide (CO) dehydrogenase molybdoprotein {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} Length = 663 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Carbon monoxide (CO) dehydrogenase molybdoprotein species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Score = 338 bits (867), Expect = e-102
Identities = 129/661 (19%), Positives = 223/661 (33%), Gaps = 52/661 (7%)
Query: 724 YEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLE 783
E++ ++ H K D F + + + + LE
Sbjct: 15 REDIKDKMTGAHGARKHHNHIFRWEIGDKEGTDATFA--KAEVVSKDMFTYHRVHPSPLE 72
Query: 784 PHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRS 843
V E+ + + QAP + VS + GLP K+ IGGGFG K
Sbjct: 73 TCQCVASMDKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIHVIAPDIGGGFGNKVGAY 132
Query: 844 AFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEI-- 901
+ A V S +L PV DR ++ + + ++ T +GK+LA+ +
Sbjct: 133 SG-YVCAVVASIVLGVPVKWVEDRMENLSTTSFARDYHMTTELAATKDGKILAMRCHVLA 191
Query: 902 YNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFP-SNTAFRGF-GGPQGML 959
+ A ++ M Y++P + + +TN A+R + +
Sbjct: 192 DHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGGVAYRCSFRVTEAVY 251
Query: 960 ITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNAR 1019
E I+ +A + ++R NF + +K + D +
Sbjct: 252 AIERAIETLAQRLEMDSADLRIKNFIQPEQFPYMAPLGWEYDSGNYPLAMKKAMDTVGYH 311
Query: 1020 KEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQ--------------AGALVHVYTDG 1065
+ KRG GISF +++ A + ++ G
Sbjct: 312 QLRAEQKAKQEAFKRGETREIMGIGISFFTEIVGAGPSKNCDILGVSMFDSAEIRIHPTG 371
Query: 1066 TVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYG 1125
+V+ G GQG T AQ+ A+ IP + + E +TD P T S S+ G
Sbjct: 372 SVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDTAPYGLGTYGSRSTPTAG 431
Query: 1126 AAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEI--------- 1176
AA A +IKA+ + IA+ +L R+ F E+
Sbjct: 432 AATAVAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGLPEKFKTMKELAWASYNSPP 491
Query: 1177 -----DFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVG 1231
+ + P + +GA F ++ID TG TR + D G +NP I G
Sbjct: 492 PNLEPGLEAVNYYDPPNMTYPFGAYFCIMDIDVDTGVAKTRRFYALDDCGTRINPMIIEG 551
Query: 1232 QIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKG 1291
Q+ G + +E+++ + G + + +P+ + P K+
Sbjct: 552 QVHGGLTEAFAVAMGQEIRYDEQ-------GNVLGASFMDFFLPTAVETP-KWETDYTV- 602
Query: 1292 HPNVKAIHSSKAVGEPPFFLASSVFF-AIKDAISAARADAGHTGWFPLDNPATPERIRMA 1350
P+ +K VGE P F A+ DA + P R+
Sbjct: 603 TPSPHHPIGAKGVGESPHVGGVPCFSNAVNDAY-------AFLNAGHIQMPHDAWRLWKV 655
Query: 1351 C 1351
Sbjct: 656 G 656
|
| >d1ffvb2 d.133.1.1 (B:147-803) Carbon monoxide (CO) dehydrogenase molybdoprotein {Hydrogenophaga pseudoflava [TaxId: 47421]} Length = 657 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Carbon monoxide (CO) dehydrogenase molybdoprotein species: Hydrogenophaga pseudoflava [TaxId: 47421]
Score = 338 bits (866), Expect = e-102
Identities = 136/663 (20%), Positives = 223/663 (33%), Gaps = 47/663 (7%)
Query: 724 YEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLE 783
E+L S H T K D F + + LE
Sbjct: 12 REDLAGKTSGAHGPREHHNHIFTWGAGDKAATDAVFA--NAPVTVSQHMYYPRVHPCPLE 69
Query: 784 PHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRS 843
V ++ ++QAP + VS + G+P SKV + IGGGFG K
Sbjct: 70 TCGCVASFDPIKGDLTTYITSQAPHVVRTVVSMLSGIPESKVRIVSPDIGGGFGNKVGIY 129
Query: 844 AFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYN 903
A +L RPV DR ++ + + ++ T +GK+L L + +
Sbjct: 130 PGYVCAIVAS-IVLGRPVKWVEDRVENISTTAFARDYHMDGELAATPDGKILGLRVNVVA 188
Query: 904 NAGNSLDLSLAVLERAMFH--SDNVYEIPNVRIMGNVCFTN-FPSNTAFRG-FGGPQGML 959
+ G + A Y+IP +TN P A+R F + +
Sbjct: 189 DHGAFDACADPTKFPAGLFHICSGSYDIPRAHCSVKGVYTNKAPGGVAYRCSFRVTEAVY 248
Query: 960 ITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPL----WNELKLSCDF 1015
+ E + +A ++ EIR NF + + Q L
Sbjct: 249 LIERMVDVLAQKLNMDKAEIRAKNFIRKEQFPYTTQFGFEYDSGDYHTALKKVLDAVDYP 308
Query: 1016 LNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQA-------GALVHVYTDGTVL 1068
++ N GI +V + M + ++ G+ +
Sbjct: 309 ALRAEQAARRADPNSPTLMGIGLVTFTEVVGAGPSKMCDILGVGMFDSCEIRIHPTGSAI 368
Query: 1069 VTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAV 1128
G + GQG T AQ+ A+ IP + V E T P T S S+ + GAA+
Sbjct: 369 ARMGTITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTSTAPYGLGTYGSRSTPVAGAAI 428
Query: 1129 LDACEQIKARMEPIASKHNFNSFAELASACYVQRI-----------DLSAHGFYITP--- 1174
A +I A+ IA+ + +L ++ D++ ++ P
Sbjct: 429 ALAARKIHAKARKIAAHMLEVNENDLDWEVDRFKVKGDDSKFKTMADIAWQAYHQPPAGL 488
Query: 1175 EIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIE 1234
E + + P + +G V+ID TG+ R + D G +NP I GQI
Sbjct: 489 EPGLEAVHYYDPPNFTYPFGIYLCVVDIDRATGETKVRRFYALDDCGTRINPMIIEGQIH 548
Query: 1235 GAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPN 1294
G +G +++ + G L Y +P+ + P + P+
Sbjct: 549 GGLTEGYAVAMGQQMPFD-------AQGNLLGNTLMDYFLPTAVETPHWETDHTVTPSPH 601
Query: 1295 VKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLDE 1354
+K V E P + F A A+ A A H G LD P T R+ + +
Sbjct: 602 --HPIGAKGVAESPHVGSIPTFTA---AVVDAFA---HVGVTHLDMPHTSYRVWKSLKEH 653
Query: 1355 FTA 1357
A
Sbjct: 654 NLA 656
|
| >d1t3qb2 d.133.1.1 (B:166-786) Quinoline 2-oxidoreductase large subunit QorL {Pseudomonas putida [TaxId: 303]} Length = 621 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Quinoline 2-oxidoreductase large subunit QorL species: Pseudomonas putida [TaxId: 303]
Score = 331 bits (849), Expect = e-100
Identities = 134/631 (21%), Positives = 210/631 (33%), Gaps = 48/631 (7%)
Query: 750 FRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQK 809
+ ++ F S ++ G+ G +E +V ++ + ++TQ P
Sbjct: 6 RARDELAPIFAS--SAGVVRGQFSCGRVSACPMETRGAVAQYEWTTQQLILWTATQMPSF 63
Query: 810 HQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDI 869
+ V+ +P + + +GGGFG K + S L RPV DR
Sbjct: 64 VRTMVAMFCAIPEHLIEVRVPDVGGGFGQKAHLHPEELLVCLL-SRALGRPVRWIEDRQE 122
Query: 870 DMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHS---DNV 926
+ + + + + F +G+ LAL+ + G +L L + + V
Sbjct: 123 NFLGATHAKQQRNEMGLAFDGDGRFLALENRSITDGGAYNNLPWTQLVESHVGNAVILGV 182
Query: 927 YEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQG 986
Y++P V TN A+RG G G + E I R A ++ SP EIR N
Sbjct: 183 YKVPAVSEESIAVATNKCPIGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRNVVM 242
Query: 987 EGSIL---HYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKF 1043
GQ + T N L+ + R+ ++ G+++
Sbjct: 243 PEDFPFTNRLGQTHREGTYLQTINLLEEMVNPEAFRQRQAEARARGKYLGLGVSVFNEVT 302
Query: 1044 GISFTLKLM------NQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLS 1097
G A V + G V VT GQG T +AQ+AA +P S
Sbjct: 303 GTGTRTLSFLGTPTTTHDSATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGVPAS 362
Query: 1098 SVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASA 1157
V + ST A+ + G+ A + + S +
Sbjct: 363 DVVIQAGSTKNTYGFGAYASRGAVIGAGSIGRAASIVRERVKQLAGHLLEAASEDIVIED 422
Query: 1158 CYVQRIDLSAHGFYITP----------------EIDFDWITGKGNPFRYFTYGAAFAEVE 1201
V + A G + + G A VE
Sbjct: 423 GLVHVAGVPAKGMPFAEVVGAAYFADATHPPGFDATLEATATYDPSDLVLANGGHAAIVE 482
Query: 1202 IDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPP 1261
ID T + D G +NP I GQI G Q +G LEE+ + D
Sbjct: 483 IDASTYATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLLEEVIYDDF------- 535
Query: 1262 GCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFL-ASSVFFAIK 1320
G L T Y IP+ DVP + L+ P+ K +GE ++V A+
Sbjct: 536 GQLVTTTLMDYLIPTTLDVP-DIRIRHLE-TPSPLVPGGIKGMGESAMISAPAAVVAAVN 593
Query: 1321 DAISAARADAGHTGWFPLDNPATPERIRMAC 1351
DA+ H P TPERI +
Sbjct: 594 DAL-------AHLEVVIETVPITPERIFRSI 617
|
| >d1vlba4 d.133.1.1 (A:311-907) Aldehyde oxidoreductase {Desulfovibrio gigas [TaxId: 879]} Length = 597 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Aldehyde oxidoreductase species: Desulfovibrio gigas [TaxId: 879]
Score = 313 bits (801), Expect = 8e-94
Identities = 133/630 (21%), Positives = 222/630 (35%), Gaps = 44/630 (6%)
Query: 731 LSIQEAI--DAKSFHPNT------ERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYL 782
+S A DA HP T + + D F D +EG+ VG Q H +
Sbjct: 1 MSGPAAAAEDAIEIHPGTPNVYFEQPIVKGEDTGPIFA--SADVTVEGDFYVGRQPHMPI 58
Query: 783 EPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETR 842
EP + + M + ++ S + H ++ +GL ++V +GG FG K +
Sbjct: 59 EPDVAFAY-MGDDGKCYIHSKSIGVHLHLYMIAPGVGLEPDQLVLVANPMGGTFGYKFSP 117
Query: 843 SAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIY 902
++ A A + RPV+L + +G+R + K +G +LA++ +
Sbjct: 118 TSEALVAVA--AMATGRPVHLRYNYQQQQQYTGKRSPWEMNVKFAAKKDGTLLAMESDWL 175
Query: 903 NNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITE 962
+ G + + R Y IPN+R +G TN +AFRG+G PQ M +E
Sbjct: 176 VDHGPYSEFGDLLTLRGAQFIGAGYNIPNIRGLGRTVATNHVWGSAFRGYGAPQSMFASE 235
Query: 963 NWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLS-CDFLNARKE 1021
+ +A ++ P E+R N G GQ+ + +L + ++L+ L ++
Sbjct: 236 CLMDMLAEKLGMDPLELRYKNAYRPGDTNPTGQEPEVFSLPDMIDQLRPKYQAALEKAQK 295
Query: 1022 VDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLH 1081
G + +
Sbjct: 296 ESTATHKKGVGISIGVYGSGLDGPDASEAWAELNADGTITVHTAW----EDHGQGADIGC 351
Query: 1082 TKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEP 1141
A A + + + +T PN+ P+ S + G A+ ACE + E
Sbjct: 352 VGTAHEALRPMGVAPEKIKFTWPNTATTPNSGPSGGSRQQVMTGNAIRVACENLLKACEK 411
Query: 1142 IASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVE 1201
+ + + + D +TG G PF + YG AEV
Sbjct: 412 PGGGY-----YTYDELKAADKPTKITGNWTASGATHCDAVTGLGKPFVVYMYGVFMAEVT 466
Query: 1202 IDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPP 1261
+D TG ++ DLG N GQI G QG+G E+ + +
Sbjct: 467 VDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDFEDIKKHATLV-- 524
Query: 1262 GCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKD 1321
P + +P K ++ + HP + VGE P +S AI +
Sbjct: 525 ---------GAGFPFIKQIPDKLDIVYVN-HPRPDGPFGASGVGELPL---TSPHAAIIN 571
Query: 1322 AISAARADAGHTGWFPLDNPATPERIRMAC 1351
AI +A TG PA PE++ A
Sbjct: 572 AIKSA------TGVRIYRLPAYPEKVLEAL 595
|
| >d1rm6a2 d.133.1.1 (A:134-769) 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain {Thauera aromatica [TaxId: 59405]} Length = 636 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain species: Thauera aromatica [TaxId: 59405]
Score = 308 bits (790), Expect = 7e-92
Identities = 130/654 (19%), Positives = 230/654 (35%), Gaps = 58/654 (8%)
Query: 731 LSIQEAI--DAKSFHPNT------ERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYL 782
++ + A+ A + H + E GDV F + D I E H ++
Sbjct: 1 MTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAFA--EADLIREKTYTFAEVNHVHM 58
Query: 783 EPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETR 842
E ++++ + + + ++TQ P V+ L + +++ +GGGFG + T
Sbjct: 59 ELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPFLGGGFGAR-TE 117
Query: 843 SAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIY 902
+ A + + V L R+ + R K K+G +GK+ AL LE
Sbjct: 118 ALHFEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIAALALEAT 177
Query: 903 NNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITE 962
G + + +Y IP ++ +TN P A RG G E
Sbjct: 178 QAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFE 237
Query: 963 NWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEV 1022
+ + E+ +IR+IN + + Q P E + RK
Sbjct: 238 ALLTEMGEELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVPECLEKVKAASGWEERKGK 297
Query: 1023 DNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHT 1082
R ++ + A + + DG + + G ++GQG +T
Sbjct: 298 LPK---GRGLGIALSHFVSGTSTPKHWTGEPHATVNLKLDFDGGITLLTGAADIGQGSNT 354
Query: 1083 KVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPI 1142
+QVAA + LS + V + P + + +S + + G A + A E++K +
Sbjct: 355 MASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVKA 414
Query: 1143 A----------------------SKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDW 1180
A S+ SF E+ A V ++ G Y P
Sbjct: 415 AAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGD 474
Query: 1181 ITGK---GNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAF 1237
+ F Y A E +D +TG V +D+G +LNP GQ +G
Sbjct: 475 KKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGV 534
Query: 1238 IQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKA 1297
G+G EE + + G + Y++P++ + P V +++ +
Sbjct: 535 WMGMGQALSEETVYDN--------GRMVHGNILDYRVPTIVESP-DIEVIIVE-SMDPNG 584
Query: 1298 IHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMAC 1351
+K E + AI +A+ A G D P +P+RI
Sbjct: 585 PFGAKEASEGM---LAGFLPAIHEAVYEA------VGVRATDFPLSPDRITELL 629
|
| >d1dgja4 d.133.1.1 (A:311-906) Aldehyde oxidoreductase {Desulfovibrio desulfuricans [TaxId: 876]} Length = 596 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Aldehyde oxidoreductase species: Desulfovibrio desulfuricans [TaxId: 876]
Score = 301 bits (770), Expect = 1e-89
Identities = 145/631 (22%), Positives = 244/631 (38%), Gaps = 48/631 (7%)
Query: 731 LSIQEAI--DAKSFHPNT-----ERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLE 783
+S EA+ DA HP T ++ KG+ + F + + + EG Q H +E
Sbjct: 1 MSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTVPFFNDPANVVAEGSYYTQRQPHLPIE 60
Query: 784 PHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSK-VVCKTKRIGGGFGGKETR 842
P + ++ +V + S + A H ++ LGL K +V GG FG K +
Sbjct: 61 PDVGYGY-INEQGQVVIHSKSVAIHLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSP 119
Query: 843 SAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIY 902
+ AV RP +L + + +G+R F + +GK+LA++ +
Sbjct: 120 TMEALVGVAV--MATGRPCHLRYNYEQQQNYTGKRSPFWTTMRYAADRQGKILAMETDWS 177
Query: 903 NNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITE 962
+ G + + R + Y I N+R G TN AFRG+G P+ +E
Sbjct: 178 VDHGPYSEFGDLLTLRGAQYIGAGYGIANIRGTGRTVATNHCWGAAFRGYGAPESEFPSE 237
Query: 963 NWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEV 1022
+ +A ++ P E+R +N EG GQ + +L ++++++ + +
Sbjct: 238 VLMDELAEKLGMDPFELRALNCYREGDTTSSGQIPEVMSLPEMFDKMRPYYE----ESKK 293
Query: 1023 DNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHT 1082
+ KRG+ + +G + + A V + DG+V + + + GQG
Sbjct: 294 RVKERSTAEIKRGVGVALGVYGAGL--DGPDTSEAWVELNDDGSVTLGNSWEDHGQGADA 351
Query: 1083 KVAQV---AASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARM 1139
A I ++ + T K PN+ P S S + G A+ ACE + M
Sbjct: 352 GSLGTAHEALRPLGITPENIHLVMNDTSKTPNSGPAGGSRSQVVTGNAIRVACEMLIEGM 411
Query: 1140 EPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAE 1199
+ AE+ + R D G + P D D G+G+PF + YG E
Sbjct: 412 RKPGGGFF--TPAEMKAEGRPMRYD----GKWTAPAKDCDA-KGQGSPFACYMYGLFLTE 464
Query: 1200 VEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWI 1259
V ++ TG + D+G N + GQI G QG+G E+ +
Sbjct: 465 VAVEVATGKATVEKMVCVADIGKICNKLVVDGQIYGGLAQGVGLALSEDYE--------- 515
Query: 1260 PPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAI 1319
G IPS+ +P + ++ P + VGE P + AI
Sbjct: 516 --DLKKHSTMGGAGIPSIKMIPDDIEIVYVE-TPRKDGPFGASGVGEMPLTAPHA---AI 569
Query: 1320 KDAISAARADAGHTGWFPLDNPATPERIRMA 1350
+ I A G PA PE++ A
Sbjct: 570 INGIYNA------CGARVRHLPARPEKVLEA 594
|
| >d1v97a6 d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [TaxId: 9913]} Length = 223 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Xanthine oxidase, domain 3 (?) species: Cow (Bos taurus) [TaxId: 9913]
Score = 185 bits (470), Expect = 1e-53
Identities = 92/206 (44%), Positives = 129/206 (62%), Gaps = 2/206 (0%)
Query: 247 KELIFPPELLLRKSNPLNLSGFGG--LKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIE 304
+E IFPPELL K P F G + W + L+ LL+LK+++P++KL+VGNTE+GIE
Sbjct: 17 QEPIFPPELLRLKDVPPKQLRFEGERVTWIQASTLKELLDLKAQHPEAKLVVGNTEIGIE 76
Query: 305 MRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSC 364
M+ K + ++I +PELN + +G+ GAA L+ + K + V + P +T
Sbjct: 77 MKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVF 136
Query: 365 KAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAE 424
+ +EQ++WFAG Q+K+VAS+GGNI TASPISDLNP++MASG K IV M
Sbjct: 137 RGVLEQLRWFAGKQVKSVASLGGNIITASPISDLNPVFMASGTKLTIVSRGTRRTVPMDH 196
Query: 425 EFFLGYRKVDLTSGEILLSIFLPWTR 450
FF YRK L EILLSI +P++R
Sbjct: 197 TFFPSYRKTLLGPEEILLSIEIPYSR 222
|
| >d1v97a3 d.41.1.1 (A:537-694) Xanthine oxidase, domain 5 (?) {Cow (Bos taurus) [TaxId: 9913]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Xanthine oxidase, domain 5 (?) species: Cow (Bos taurus) [TaxId: 9913]
Score = 129 bits (324), Expect = 6e-35
Identities = 68/158 (43%), Positives = 91/158 (57%), Gaps = 5/158 (3%)
Query: 576 VPSTHLSAMQSFHRPSIIGNQDYEITKHGTS----VGSPEVHLSSRLQVTGEAEYTDDTP 631
+ T+ SA F + Q ++ +G S VG P HL++ +Q +GEA Y DD P
Sbjct: 2 LDPTYTSATLLFQKHPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIP 61
Query: 632 MPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFA 691
N L LV S R HA+I SID S A+ PGFV A+D+ G N G + DE +FA
Sbjct: 62 RYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIPGSNETG-LFNDETVFA 120
Query: 692 SEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPA 729
+ VTCVG +IG VVA+T E A+ A+ V+V YE+LPA
Sbjct: 121 KDTVTCVGHIIGAVVADTPEHAERAAHVVKVTYEDLPA 158
|
| >d1v97a4 d.87.2.1 (A:415-528) Xanthine oxidase, domain 4 (?) {Cow (Bos taurus) [TaxId: 9913]} Length = 114 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Xanthine oxidase, domain 4 (?) species: Cow (Bos taurus) [TaxId: 9913]
Score = 116 bits (293), Expect = 3e-31
Identities = 53/114 (46%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Query: 453 EFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFI 512
EF FKQA RR+DDIA V GMRV + V + L YGG+A ++SA KT
Sbjct: 2 EFFSAFKQASRREDDIAKVTCGMRVLFQPGS--MQVKELALCYGGMADRTISALKTTQKQ 59
Query: 513 VGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQM 566
+ K W+++LLQ+ L ++ L DAPGGM++FR++LTLSFFFKF+L V ++
Sbjct: 60 LSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYLTVLKKL 113
|
| >d1jroa4 d.145.1.3 (A:179-345) Xanthine dehydrogenase chain A, domain 3 {Rhodobacter capsulatus [TaxId: 1061]} Length = 167 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Xanthine dehydrogenase chain A, domain 3 species: Rhodobacter capsulatus [TaxId: 1061]
Score = 116 bits (292), Expect = 1e-30
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 12/175 (6%)
Query: 273 WYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDD 332
+ P L + +P++ L+ G T+V + + + ++H +L + D
Sbjct: 2 AFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPD 61
Query: 333 GLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 392
G IGA V + L A ++ FA Q++ VA++GGNI
Sbjct: 62 GYGIGAGVTIAALRAFAEGP-----------HPALAGLLRRFASEQVRQVATIGGNIANG 110
Query: 393 SPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLP 447
SPI D P +A GA + R E+FFL YRK D GE + S+ LP
Sbjct: 111 SPIGDGPPALIAMGASLTLR-RGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLP 164
|
| >d1jrob1 d.41.1.1 (B:2-123) Xanthine dehydrogenase chain B, N-terminal domain {Rhodobacter capsulatus [TaxId: 1061]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Xanthine dehydrogenase chain B, N-terminal domain species: Rhodobacter capsulatus [TaxId: 1061]
Score = 115 bits (288), Expect = 1e-30
Identities = 50/121 (41%), Positives = 66/121 (54%)
Query: 606 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGF 665
SVG P H S+R VTG+A Y DD P P N LH A LS A I +D R SPG
Sbjct: 1 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGV 60
Query: 666 VGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYE 725
+ +F A D+ DN P + E + A+ V VGQ I +V A +H A++A+RK ++ Y
Sbjct: 61 IAVFTAADLPHDNDASPAPSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYA 120
Query: 726 E 726
Sbjct: 121 P 121
|
| >d1t3qc2 d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Quinoline 2-oxidoreductase medium subunit QorM species: Pseudomonas putida [TaxId: 303]
Score = 114 bits (287), Expect = 7e-30
Identities = 34/176 (19%), Positives = 76/176 (43%), Gaps = 10/176 (5%)
Query: 272 KWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKD 331
+ P LQ ++++ + PD++++ G + + + + L+ + +V EL ++
Sbjct: 7 SYRAPASLQEVIQVLADDPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSA 66
Query: 332 DGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT 391
L +GA V + + + A ++N ++GG++
Sbjct: 67 GILSVGAMVTHFR---------NKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAH 117
Query: 392 ASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLP 447
A +++ L GA +I G +R+ A +F G+ DL +GE+L+ + +P
Sbjct: 118 ADAGAEMPFLMATLGATMYIASSAG-VRSVSATDFMKGHYFTDLEAGEVLVRVEIP 172
|
| >d1v97a1 a.56.1.1 (A:93-165) Xanthine oxidase, domain 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Xanthine oxidase, domain 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 107 bits (269), Expect = 1e-28
Identities = 47/74 (63%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 107 NRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCT 166
+ K LHP+QE + +SHGSQCGFCTPG +MSMY+LLR+ PT E+IE++ GNLCRCT
Sbjct: 1 STKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRNQPE-PTVEEIEDAFQGNLCRCT 59
Query: 167 GYRPIVDAFRVFAK 180
GYRPI+ FR FAK
Sbjct: 60 GYRPILQGFRTFAK 73
|
| >d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain {Thauera aromatica [TaxId: 59405]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain species: Thauera aromatica [TaxId: 59405]
Score = 112 bits (281), Expect = 2e-28
Identities = 42/217 (19%), Positives = 73/217 (33%), Gaps = 52/217 (23%)
Query: 272 KWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKD 331
+ +RP L + + + L T++ +R L+ +T + L ++
Sbjct: 8 RTHRPATLADAVNALAA-EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLA 66
Query: 332 DG-LEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNI- 389
DG L IGA L + + ++ A + + AG + A++GGN+
Sbjct: 67 DGSLRIGAGATLEAIAEHD---------AIRTTWPALAQAAESVAGPTHRAAATLGGNLC 117
Query: 390 -------------------------------------CTASPISDLNPLWMASGAKFHIV 412
C A+ D+ P M A+ IV
Sbjct: 118 QDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRCYATYHGDVAPALMVLDARAEIV 177
Query: 413 DCKGNIRTTMAEEFFL--GYRKVDLTSGEILLSIFLP 447
G RT + F G + L GE+L +I +P
Sbjct: 178 GPAGK-RTVPVAQLFRESGAEHLTLEKGELLAAIEVP 213
|
| >d1ffvc2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Score = 110 bits (275), Expect = 4e-28
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 11/176 (6%)
Query: 273 WYRPLKLQHLLELKSKY-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKD 331
++ P + + L + D+KLL G + M+L+ Q + LI + +PEL + +
Sbjct: 8 YHAPKSVGEAVALLGQLGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEG 67
Query: 332 DGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT 391
+ IGA +L + E K A Q++N ++GG+I
Sbjct: 68 STVVIGAMTVENDL---------ISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAH 118
Query: 392 ASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLP 447
P +D L +A +++ RT A+ FFLG L E+++ I +P
Sbjct: 119 GDPGNDHPALSIA-VEAHFVLEGPNGRRTVPADGFFLGTYMTLLEENEVMVEIRVP 173
|
| >d1v97a2 d.15.4.2 (A:3-92) Xanthine oxidase, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 90 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Xanthine oxidase, N-terminal domain species: Cow (Bos taurus) [TaxId: 9913]
Score = 103 bits (258), Expect = 6e-27
Identities = 48/88 (54%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 20 EAILYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKK 78
E + +VNG + V + TLL YLR +GL GTKLGCGEGGCGACTVM+S+YD+ K
Sbjct: 3 ELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDK 62
Query: 79 CVHCAVNACLAPLYSLEGMHVITVEGVG 106
+H + NACLAP+ +L + V TVEG+G
Sbjct: 63 IIHFSANACLAPICTLHHVAVTTVEGIG 90
|
| >d1rm6a1 d.41.1.1 (A:9-133) 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, N-terminal domain {Thauera aromatica [TaxId: 59405]} Length = 125 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, N-terminal domain species: Thauera aromatica [TaxId: 59405]
Score = 102 bits (255), Expect = 4e-26
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 606 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGF 665
+VG + +VTG+A+YT D P+ L ++ S HARIL+ID S A + G
Sbjct: 2 TVGVRTPLVDGVEKVTGKAKYTADIA-APDALVGRILRSPHAHARILAIDTSAAEALEGV 60
Query: 666 VGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYE 725
+ + + + P+ +E A + V G + V A A+ A ++V+YE
Sbjct: 61 IAVCTGAETPVPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDYE 120
Query: 726 ELPA 729
LPA
Sbjct: 121 VLPA 124
|
| >d1n62b1 d.41.1.1 (B:6-146) Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} Length = 141 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Score = 101 bits (251), Expect = 2e-25
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
Query: 607 VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFV 666
+G + G+ Y DD P L V S HARI SID S A++ PG
Sbjct: 16 MGCKRKRVEDIRFTQGKGNYVDDVK-LPGMLFGDFVRSSHAHARIKSIDTSKAKALPGVF 74
Query: 667 GIFFAEDVQGDNRIGPVVADEE---LFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVE 723
+ A D++ N + + A E V Q + VVA+ A A V+V+
Sbjct: 75 AVLTAADLKPLNLHYMPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVD 134
Query: 724 YEELPAI 730
YE LP +
Sbjct: 135 YEPLPVL 141
|
| >d1t3qb1 d.41.1.1 (B:1-165) Quinoline 2-oxidoreductase large subunit QorL, N-domain {Pseudomonas putida [TaxId: 303]} Length = 165 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Quinoline 2-oxidoreductase large subunit QorL, N-domain species: Pseudomonas putida [TaxId: 303]
Score = 101 bits (252), Expect = 3e-25
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 10/149 (6%)
Query: 606 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGF 665
S+G+ + +TG Y D LH A + S HARI+SID + A++ PG
Sbjct: 13 SIGTSVLRREDTRLLTGRGRYIADLV-LSGMLHVASLRSPFAHARIVSIDVADAQALPGV 71
Query: 666 VGIFFAEDVQGDNR--------IGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLAS 717
++ DV ++ G + L A+ V VG+++ VVVA + A+ A+
Sbjct: 72 ELVWCGADVAELSQGIVATMQVEGFQTTIQPLLANGVTRFVGEIVAVVVASSRAIAEDAA 131
Query: 718 RKVQVEYEELPAILSIQEAIDAKS-FHPN 745
+ +QVEYEELPA+ I+ A++ ++ +
Sbjct: 132 QLIQVEYEELPAVTGIEAALEGEARANDT 160
|
| >d1n62c2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Score = 101 bits (253), Expect = 3e-25
Identities = 35/176 (19%), Positives = 71/176 (40%), Gaps = 11/176 (6%)
Query: 273 WYRPLKLQHLLELKSKY-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKD 331
++RP + + L +K D++ L G + M+ + + L+ + + +L + +
Sbjct: 8 YHRPKSIADAVALLTKLGEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEG 67
Query: 332 DGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT 391
+ IGA L+ + E A QI+ + ++GGN
Sbjct: 68 TDVVIGAMTTQHALIGS---------DFLAAKLPIIRETSLLIADPQIRYMGTIGGNAAN 118
Query: 392 ASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLP 447
P +D+ L GA + + +G R A +++ G + GE+L +I +P
Sbjct: 119 GDPGNDMPALMQCLGAAYELTGPEG-ARIVAARDYYQGAYFTAIEPGELLTAIRIP 173
|
| >d1ffvb1 d.41.1.1 (B:7-146) Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain {Hydrogenophaga pseudoflava [TaxId: 47421]} Length = 140 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Score = 97.6 bits (242), Expect = 4e-24
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 607 VGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFV 666
+G+ + + G+ Y DD P LH +V + H RI I A + PG
Sbjct: 12 MGASRLRKEDARFIQGKGNYVDDIK-MPGMLHMDIVRAPIAHGRIKKIHKDAALAMPGVH 70
Query: 667 GIFFAEDVQGDNRIGPVVADEE---LFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVE 723
+ AED++ + + A E V Q + +V+A+ A A V+VE
Sbjct: 71 AVLTAEDLKPLKLHWMPTLAGDVAAVLADEKVHFQMQEVAIVIADDRYIAADAVEAVKVE 130
Query: 724 YEELPAIL 731
Y+ELP ++
Sbjct: 131 YDELPVVI 138
|
| >d1vlba3 d.41.1.1 (A:194-310) Aldehyde oxidoreductase, domain 3 {Desulfovibrio gigas [TaxId: 879]} Length = 117 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Aldehyde oxidoreductase, domain 3 species: Desulfovibrio gigas [TaxId: 879]
Score = 96.0 bits (238), Expect = 5e-24
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 625 EYTDD--TPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGP 682
+Y D MP LH A+V ++ HA I ID S A + PG + +DV+G NRI
Sbjct: 1 DYGADLGLKMPAGTLHLAMVQAKVSHANIKGIDTSEALTMPGVHSVITHKDVKGKNRITG 60
Query: 683 VVA---------DEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPA 729
++ D + E V G I +V A++ A+ A+ KV+V+ EELPA
Sbjct: 61 LITFPTNKGDGWDRPILCDEKVFQYGDCIALVCADSEANARAAAEKVKVDLEELPA 116
|
| >d1t3qa1 a.56.1.1 (A:88-168) Quinoline 2-oxidoreductase small subunit QorS, C-domain {Pseudomonas putida [TaxId: 303]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Quinoline 2-oxidoreductase small subunit QorS, C-domain species: Pseudomonas putida [TaxId: 303]
Score = 94.3 bits (234), Expect = 7e-24
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 112 LHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPI 171
L+ +Q+S R H QCGFCT G + + S+L + P+ +++ E ++GNLCRCTGY I
Sbjct: 5 LNALQDSFRRHHALQCGFCTAGMLATARSILAENPA-PSRDEVREVMSGNLCRCTGYETI 63
Query: 172 VDAFRVFAK 180
+DA A
Sbjct: 64 IDAITDPAV 72
|
| >d1ffva1 a.56.1.1 (A:82-157) Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain {Hydrogenophaga pseudoflava [TaxId: 47421]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Score = 90.8 bits (225), Expect = 1e-22
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 112 LHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPI 171
LH +QE + HG QCGFCTPG +M Y L+ PTE +I + GNLCRCTGY+ I
Sbjct: 5 LHAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQ-ENPNPTEAEIRMGMTGNLCRCTGYQNI 63
Query: 172 VDAFRVFAK 180
V A + A+
Sbjct: 64 VKAVQYAAR 72
|
| >d1rm6c1 a.56.1.1 (C:82-157) 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, C-terminal domain {Thauera aromatica [TaxId: 59405]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, C-terminal domain species: Thauera aromatica [TaxId: 59405]
Score = 90.1 bits (223), Expect = 2e-22
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 112 LHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPI 171
L +Q + G+QCGFCTPG IM+ +LLR P+ ++I+ +LAGNLCRCTGY I
Sbjct: 4 LSKLQAAFHEKLGTQCGFCTPGMIMASEALLR-KNPSPSRDEIKAALAGNLCRCTGYVKI 62
Query: 172 VDAFRVFAK 180
+ + A
Sbjct: 63 IKSVETAAA 71
|
| >d1jroa1 a.56.1.1 (A:85-166) Xanthine dehydrogenase chain A, domain 2 {Rhodobacter capsulatus [TaxId: 1061]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Xanthine dehydrogenase chain A, domain 2 species: Rhodobacter capsulatus [TaxId: 1061]
Score = 88.1 bits (218), Expect = 1e-21
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 112 LHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPI 171
LHP+Q++++ HGSQCGFCTPGFI+SM + + ++ LAGNLCRCTGY PI
Sbjct: 4 LHPVQQAMIDHHGSQCGFCTPGFIVSMAAA-----HDRDRKDYDDLLAGNLCRCTGYAPI 58
Query: 172 VDAFRVFAKTNDA 184
+ A A A
Sbjct: 59 LRAAEAAAGEPPA 71
|
| >d1jroa2 d.15.4.2 (A:1-84) Xanthine dehydrogenase chain A, N-terminal domain {Rhodobacter capsulatus [TaxId: 1061]} Length = 84 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Xanthine dehydrogenase chain A, N-terminal domain species: Rhodobacter capsulatus [TaxId: 1061]
Score = 87.2 bits (216), Expect = 3e-21
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 23 LYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHC 82
+NG + + +LLE LR GLTGTK GC EG CGACTVM+
Sbjct: 5 FLLNGETRRVRIEDPTQSLLELLRAEGLTGTKEGCNEGDCGACTVMIRDAAG------SR 58
Query: 83 AVNACLAPLYSLEGMHVITVEGVG 106
AVNACL L + G + T+EG+
Sbjct: 59 AVNACLMMLPQIAGKALRTIEGIA 82
|
| >d1n62a1 a.56.1.1 (A:82-163) Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Score = 86.2 bits (213), Expect = 5e-21
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 112 LHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPI 171
L +QE HG QCG+CTPG IM + LL+ PTE +I + GNLCRCTGY+ I
Sbjct: 6 LSALQEGFRMMHGLQCGYCTPGMIMRSHRLLQE-NPSPTEAEIRFGIGGNLCRCTGYQNI 64
Query: 172 VDAFRVFAKTNDALYT 187
V A + A + +
Sbjct: 65 VKAIQYAAAKINGVPF 80
|
| >d1vlba1 a.56.1.1 (A:81-193) Aldehyde oxidoreductase, domain 2 {Desulfovibrio gigas [TaxId: 879]} Length = 113 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Aldehyde oxidoreductase, domain 2 species: Desulfovibrio gigas [TaxId: 879]
Score = 80.9 bits (199), Expect = 9e-19
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 111 GLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIE-ESLAGNLCRCTGYR 169
LHP+Q++ V G+QCGFC+PGFI+S LL ++ P E+ + N CRCTGY+
Sbjct: 4 NLHPLQKAWVLHGGAQCGFCSPGFIVSAKGLLDTNADPSREDVRDWFQKHRNACRCTGYK 63
Query: 170 PIVDAFRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPC 208
P+VDA A + + EF P+ G+
Sbjct: 64 PLVDAVMDAAAVING------KKPETDLEFKMPADGRIW 96
|
| >d1jroa3 d.87.2.1 (A:346-462) Xanthine dehydrogenase chain A, domain 4 {Rhodobacter capsulatus [TaxId: 1061]} Length = 117 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Xanthine dehydrogenase chain A, domain 4 species: Rhodobacter capsulatus [TaxId: 1061]
Score = 77.0 bits (189), Expect = 3e-17
Identities = 22/122 (18%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Query: 456 KEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGK 515
+ +K + R D DI+ V + + L + + A + +GG+A + A + ++G+
Sbjct: 4 RCYKLSKRFDQDISAVCGCLNLTL----KGSKIETARIAFGGMAGVPKRAAAFEAALIGQ 59
Query: 516 SWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKES 575
+ ++ + AL +L D D +R + + ++ +S ++ E
Sbjct: 60 DFREDTIAAALPLLAQDFTPLSD-MRASAAYRMNAAQAMALRYVRELS---GEAVAVLEV 115
Query: 576 VP 577
+P
Sbjct: 116 MP 117
|
| >d1rm6c2 d.15.4.2 (C:1-81) 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, N-terminal domain {Thauera aromatica [TaxId: 59405]} Length = 81 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, N-terminal domain species: Thauera aromatica [TaxId: 59405]
Score = 75.7 bits (186), Expect = 3e-17
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 12/85 (14%)
Query: 23 LYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVH 81
L +NG R ++ LL+YLR+ +GLTGTK GC G CGACTV+
Sbjct: 7 LTLNG-RAREDLVPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVL----------VDD 55
Query: 82 CAVNACLAPLYSLEGMHVITVEGVG 106
AC + + G V TVE +
Sbjct: 56 RPRLACSTLAHQVAGKKVETVESLA 80
|
| >d1n62a2 d.15.4.2 (A:3-81) Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} Length = 79 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Score = 72.9 bits (179), Expect = 2e-16
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 23 LYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVH 81
L +NG V L+ ++R+ LTG +GC CGACTV
Sbjct: 6 LTING-HPVEALVEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTVD----------LDG 54
Query: 82 CAVNACLAPLYSLEGMHVITVEGV 105
+V +C G + T+EG+
Sbjct: 55 MSVKSCTMFAVQANGASITTIEGM 78
|
| >d1ffva2 d.15.4.2 (A:3-81) Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain {Hydrogenophaga pseudoflava [TaxId: 47421]} Length = 79 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Score = 72.5 bits (178), Expect = 3e-16
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Query: 23 LYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVH 81
+ VNG + L+ +LR+ + LTG +GC CGACTV
Sbjct: 6 VNVNG-KAQEKAVEPRTLLIHFLREELNLTGAHIGCETSHCGACTVD----------IDG 54
Query: 82 CAVNACLAPLYSLEGMHVITVEGV 105
+V +C +G V+TVEG+
Sbjct: 55 RSVKSCTHLAVQCDGSEVLTVEGL 78
|
| >d1t3qa2 d.15.4.2 (A:7-87) Quinoline 2-oxidoreductase small subunit QorS, N-domain {Pseudomonas putida [TaxId: 303]} Length = 81 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Quinoline 2-oxidoreductase small subunit QorS, N-domain species: Pseudomonas putida [TaxId: 303]
Score = 72.2 bits (177), Expect = 5e-16
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 23 LYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVH 81
+NG + + + L + LR+ +GLTGTK+GC +G CG+CT++
Sbjct: 8 ATING-KPRVFYVEPRMHLADALREVVGLTGTKIGCEQGVCGSCTIL----------IDG 56
Query: 82 CAVNACLAPLYSLEGMHVITVEGV 105
+ +CL EG + TVEG+
Sbjct: 57 APMRSCLTLAVQAEGCSIETVEGL 80
|
| >d1dgja2 d.15.4.2 (A:1-80) Aldehyde oxidoreductase, N-terminal domain {Desulfovibrio desulfuricans [TaxId: 876]} Length = 80 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Aldehyde oxidoreductase, N-terminal domain species: Desulfovibrio desulfuricans [TaxId: 876]
Score = 69.5 bits (170), Expect = 3e-15
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 13/86 (15%)
Query: 23 LYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVH 81
L VNG + L++ LR + LT K+GCG+G CGACTV++
Sbjct: 6 LIVNG-MARRLLVSPNDLLVDVLRSQLQLTSVKVGCGKGQCGACTVILD----------G 54
Query: 82 CAVNACLAPLYSL-EGMHVITVEGVG 106
V AC+ + + E V T+EG+G
Sbjct: 55 KVVRACIIKMSRVAENASVTTLEGIG 80
|
| >d1vlba2 d.15.4.2 (A:1-80) Aldehyde oxidoreductase, N-terminal domain {Desulfovibrio gigas [TaxId: 879]} Length = 80 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Aldehyde oxidoreductase, N-terminal domain species: Desulfovibrio gigas [TaxId: 879]
Score = 68.3 bits (167), Expect = 1e-14
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 13/86 (15%)
Query: 23 LYVNGLRKVLPDGLAHLTLLEYLRD-IGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVH 81
+ VNG+ + L A L + LR +GLTG K+GC +G CGAC+V++
Sbjct: 6 ITVNGIEQNL-FVDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVILD----------G 54
Query: 82 CAVNACLAPLYSL-EGMHVITVEGVG 106
V AC+ + + +G + T+EGVG
Sbjct: 55 KVVRACVTKMKRVADGAQITTIEGVG 80
|
| >d1t3qc1 d.87.2.1 (C:177-285) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]} Length = 109 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Quinoline 2-oxidoreductase medium subunit QorM species: Pseudomonas putida [TaxId: 303]
Score = 64.6 bits (157), Expect = 5e-13
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 5/103 (4%)
Query: 458 FKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSW 517
F + RR D ALV A + ++ A + G V + A + F+VGK
Sbjct: 4 FDEYARRKGDYALVMAAAGLSMQGG----RCVAARIALGAVEERAHQAIRANDFLVGKVI 59
Query: 518 SQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFL 560
+ A ++ + + D G D R SL + + L
Sbjct: 60 DESTAATAAELATEGLEPRSD-IHGSRDLRLSLAKAITQRVIL 101
|
| >d1n62c1 d.87.2.1 (C:178-286) Carbon monoxide (CO) dehydrogenase flavoprotein, C-terminal domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} Length = 109 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Carbon monoxide (CO) dehydrogenase flavoprotein, C-terminal domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Score = 60.9 bits (147), Expect = 9e-12
Identities = 16/100 (16%), Positives = 36/100 (36%), Gaps = 5/100 (5%)
Query: 458 FKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSW 517
+++ R+ D A A + + + A + VA L A++ +VG +
Sbjct: 6 YEKLKRKIGDYATAAAAVVLTMSGG----KCVTASIGLTNVANTPLWAEEAGKVLVGTAL 61
Query: 518 SQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFK 557
+ L A+ + + D G ++R + +
Sbjct: 62 DKPALDKAVALAEAITAPASD-GRGPAEYRTKMAGVMLRR 100
|
| >d1ffvc1 d.87.2.1 (C:178-287) Carbon monoxide (CO) dehydrogenase flavoprotein, C-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]} Length = 110 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Carbon monoxide (CO) dehydrogenase flavoprotein, C-terminal domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Score = 56.6 bits (136), Expect = 3e-10
Identities = 19/100 (19%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Query: 458 FKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSW 517
+++ R+ D A + + VS + VAP +L A+ + ++GK++
Sbjct: 6 YEKLKRKTGDWATAGCAVVMRKSGN----TVSHIRIALTNVAPTALRAEAAEAALLGKAF 61
Query: 518 SQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFK 557
++E +Q A ED G D++ ++ +
Sbjct: 62 TKEAVQAAADAAIAICEPAED-LRGDADYKTAMAGQMVKR 100
|
| >d1rm6b1 d.87.2.1 (B:217-323) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, C-terminal domain {Thauera aromatica [TaxId: 59405]} Length = 107 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, C-terminal domain species: Thauera aromatica [TaxId: 59405]
Score = 38.5 bits (89), Expect = 7e-04
Identities = 10/93 (10%), Positives = 27/93 (29%), Gaps = 7/93 (7%)
Query: 458 FKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSW 517
K R D L + + ++ + G L ++G +W
Sbjct: 7 SKVRIRDAVDFPLAGVAAALQRDGD----RIAGLRVAITGSNSAPL--MVPVDALLGGNW 60
Query: 518 SQELLQNALKILQTDIILKEDAPGGMVDFRKSL 550
+ ++++ + V +R+ +
Sbjct: 61 DDAAAETLAQLVRKTSNVLRTT-ITGVKYRRRV 92
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1370 | |||
| d1v97a5 | 638 | Xanthine oxidase, C-terminal domain {Cow (Bos taur | 100.0 | |
| d1jrob2 | 654 | Xanthine dehydrogenase chain B, C-terminal domain | 100.0 | |
| d1rm6a2 | 636 | 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, | 100.0 | |
| d1t3qb2 | 621 | Quinoline 2-oxidoreductase large subunit QorL {Pse | 100.0 | |
| d1n62b2 | 663 | Carbon monoxide (CO) dehydrogenase molybdoprotein | 100.0 | |
| d1ffvb2 | 657 | Carbon monoxide (CO) dehydrogenase molybdoprotein | 100.0 | |
| d1vlba4 | 597 | Aldehyde oxidoreductase {Desulfovibrio gigas [TaxI | 100.0 | |
| d1dgja4 | 596 | Aldehyde oxidoreductase {Desulfovibrio desulfurica | 100.0 | |
| d1v97a6 | 223 | Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [ | 100.0 | |
| d1t3qc2 | 176 | Quinoline 2-oxidoreductase medium subunit QorM {Ps | 100.0 | |
| d1n62c2 | 177 | Carbon monoxide (CO) dehydrogenase flavoprotein, N | 100.0 | |
| d1ffvc2 | 177 | Carbon monoxide (CO) dehydrogenase flavoprotein, N | 100.0 | |
| d1rm6b2 | 216 | 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, | 100.0 | |
| d1jroa4 | 167 | Xanthine dehydrogenase chain A, domain 3 {Rhodobac | 100.0 | |
| d1v97a3 | 158 | Xanthine oxidase, domain 5 (?) {Cow (Bos taurus) [ | 100.0 | |
| d1t3qb1 | 165 | Quinoline 2-oxidoreductase large subunit QorL, N-d | 100.0 | |
| d1jrob1 | 122 | Xanthine dehydrogenase chain B, N-terminal domain | 100.0 | |
| d1rm6a1 | 125 | 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, | 100.0 | |
| d1ffvb1 | 140 | Carbon monoxide (CO) dehydrogenase molybdoprotein, | 100.0 | |
| d1n62b1 | 141 | Carbon monoxide (CO) dehydrogenase molybdoprotein, | 100.0 | |
| d1vlba3 | 117 | Aldehyde oxidoreductase, domain 3 {Desulfovibrio g | 99.95 | |
| d1v97a2 | 90 | Xanthine oxidase, N-terminal domain {Cow (Bos taur | 99.94 | |
| d1v97a1 | 73 | Xanthine oxidase, domain 2 {Cow (Bos taurus) [TaxI | 99.94 | |
| d1vlba1 | 113 | Aldehyde oxidoreductase, domain 2 {Desulfovibrio g | 99.94 | |
| d1t3qa1 | 81 | Quinoline 2-oxidoreductase small subunit QorS, C-d | 99.94 | |
| d1rm6c1 | 76 | 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, | 99.93 | |
| d1n62a1 | 82 | Carbon monoxide (CO) dehydrogenase iron-sulfur pro | 99.93 | |
| d1ffva1 | 76 | Carbon monoxide (CO) dehydrogenase iron-sulfur pro | 99.93 | |
| d1v97a4 | 114 | Xanthine oxidase, domain 4 (?) {Cow (Bos taurus) [ | 99.91 | |
| d1jroa1 | 82 | Xanthine dehydrogenase chain A, domain 2 {Rhodobac | 99.9 | |
| d1jroa2 | 84 | Xanthine dehydrogenase chain A, N-terminal domain | 99.9 | |
| d1n62a2 | 79 | Carbone monoxide (CO) dehydrogenase iron-sulfur pr | 99.89 | |
| d1ffva2 | 79 | Carbone monoxide (CO) dehydrogenase iron-sulfur pr | 99.89 | |
| d1t3qa2 | 81 | Quinoline 2-oxidoreductase small subunit QorS, N-d | 99.89 | |
| d1rm6c2 | 81 | 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, | 99.89 | |
| d1vlba2 | 80 | Aldehyde oxidoreductase, N-terminal domain {Desulf | 99.89 | |
| d1dgja2 | 80 | Aldehyde oxidoreductase, N-terminal domain {Desulf | 99.88 | |
| d1jroa3 | 117 | Xanthine dehydrogenase chain A, domain 4 {Rhodobac | 99.82 | |
| d1ffvc1 | 110 | Carbon monoxide (CO) dehydrogenase flavoprotein, C | 99.71 | |
| d1n62c1 | 109 | Carbon monoxide (CO) dehydrogenase flavoprotein, C | 99.69 | |
| d1t3qc1 | 109 | Quinoline 2-oxidoreductase medium subunit QorM {Ps | 99.68 | |
| d1rm6b1 | 107 | 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, | 99.62 | |
| d1kf6b2 | 105 | Fumarate reductase iron-sulfur protein, N-terminal | 98.31 | |
| d2bs2b2 | 106 | Fumarate reductase iron-sulfur protein, N-terminal | 97.89 | |
| d1hska1 | 194 | Uridine diphospho-N-Acetylenolpyruvylglucosamine r | 97.89 | |
| d1uxya1 | 198 | Uridine diphospho-N-Acetylenolpyruvylglucosamine r | 97.56 | |
| d3c8ya2 | 126 | Fe-only hydrogenase, N-terminal domain {Clostridiu | 97.44 | |
| d1nekb2 | 106 | Succinate dehydogenase iron-sulfur protein, N-term | 97.15 | |
| d2fug33 | 95 | Nadh-quinone oxidoreductase chain 3, Nqo3, N-termi | 97.06 | |
| d1iuea_ | 98 | 2Fe-2S ferredoxin {Malaria parasite (Plasmodium fa | 96.84 | |
| d1awda_ | 94 | 2Fe-2S ferredoxin {Chlorella fusca [TaxId: 3073]} | 96.82 | |
| d1frra_ | 95 | 2Fe-2S ferredoxin {Equisetum arvense [TaxId: 3258] | 96.8 | |
| d1l5pa_ | 93 | 2Fe-2S ferredoxin {Trichomonas vaginalis [TaxId: 5 | 96.49 | |
| d1a70a_ | 97 | 2Fe-2S ferredoxin {Spinach (Spinacia oleracea) [Ta | 96.47 | |
| d1czpa_ | 98 | 2Fe-2S ferredoxin {Cyanobacterium (Anabaena sp.), | 96.22 | |
| d2piaa3 | 98 | Phthalate dioxygenase reductase, C-terminal domain | 96.19 | |
| d1wria_ | 93 | 2Fe-2S ferredoxin {Equisetum arvense [TaxId: 3258] | 96.17 | |
| d1f0xa2 | 265 | D-lactate dehydrogenase {Escherichia coli [TaxId: | 96.12 | |
| d1w1oa2 | 206 | Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId | 95.9 | |
| d1jq4a_ | 98 | Methane monooxygenase reductase N-terminal domain | 95.88 | |
| d1krha3 | 104 | Benzoate dioxygenase reductase, N-terminal domain | 95.76 | |
| d1e9ma_ | 106 | 2Fe-2S ferredoxin {Rhodobacter capsulatus, ferredo | 95.74 | |
| d1xlqa1 | 106 | 2Fe-2S ferredoxin {Pseudomonas putida, putidaredox | 95.45 | |
| d1frda_ | 98 | 2Fe-2S ferredoxin {Cyanobacterium (Anabaena sp.), | 94.9 | |
| d1b9ra_ | 105 | 2Fe-2S ferredoxin {Pseudomonas sp., terpredoxin [T | 94.83 | |
| d1wvfa2 | 236 | Flavoprotein subunit of p-cresol methylhydroxylase | 94.72 | |
| d1i7ha_ | 109 | Adrenodoxin-like ferredoxin {Escherichia coli [Tax | 93.2 | |
| d2i0ka2 | 216 | Cholesterol oxidase {Brevibacterium sterolicum [Ta | 92.63 | |
| d2bt6a1 | 104 | Adrenodoxin {Cow (Bos taurus) [TaxId: 9913]} | 92.26 | |
| d1rm6a2 | 636 | 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, | 92.24 | |
| d1jrob2 | 654 | Xanthine dehydrogenase chain B, C-terminal domain | 92.22 | |
| d1e8ga2 | 268 | Vanillyl-alcohol oxidase {Fungus (Penicillium simp | 89.37 | |
| d1vlba4 | 597 | Aldehyde oxidoreductase {Desulfovibrio gigas [TaxI | 89.34 | |
| d1doia_ | 128 | 2Fe-2S ferredoxin {Archaeon Haloarcula marismortui | 89.26 | |
| d1t3qb2 | 621 | Quinoline 2-oxidoreductase large subunit QorL {Pse | 86.98 |
| >d1v97a5 d.133.1.1 (A:695-1332) Xanthine oxidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Xanthine oxidase, C-terminal domain species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=1087.45 Aligned_cols=627 Identities=51% Similarity=0.889 Sum_probs=587.0
Q ss_pred CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHH
Q ss_conf 78999997515999997421113871101124888628999999785045688988479999658984999959988289
Q 000657 730 ILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQK 809 (1370)
Q Consensus 730 v~~~~~Al~~~a~~~~~~~~~~~Gdv~~af~~~~a~~vve~~~~~~~q~H~~mEp~~a~A~~~~~~g~l~V~sstQ~p~~ 809 (1370)
|+|+|||+++++++. .+..+++||++++| ++|++|||++|++++++|++|||++|+|+|+.++|+|+||++||+|+.
T Consensus 1 v~tiedA~~~~~~~~-~~~~~~~GDv~~af--a~A~~vve~~y~~~~~~h~~mEp~~~vA~~~~~~g~l~i~~~tQ~p~~ 77 (638)
T d1v97a5 1 IITIEDAIKNNSFYG-SELKIEKGDLKKGF--SEADNVVSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMK 77 (638)
T ss_dssp CCSHHHHHHTTCEEE-EEEEEEESCHHHHH--HHCSEEEEEEEEECCBCCCCSSCCEEEEEECSSTTCEEEEECCSCHHH
T ss_pred CCCHHHHHHCCCCCC-CCCCCCCCCHHHHH--HHCCEEEEEEEEECCEEEECCCCCEEEEEEECCCCEEEEEECCCCHHH
T ss_conf 936799864689879-87766748999998--649989999999898613677587499999789997999979818999
Q ss_pred HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCCCEEEEEEEEEC
Q ss_conf 99999988199997289993655788999976103999999999970799889994868888621788657999999448
Q 000657 810 HQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFT 889 (1370)
Q Consensus 810 vr~~vA~~Lgip~~kV~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~ 889 (1370)
+|..+|++||||++||+|+++++|||||+|......+++.+|++|+++||||||+|||+|+|+++++||++.+++|+++|
T Consensus 78 ~r~~~A~~lglp~~~VrV~~~~vGGgFG~K~~~~~~~~~~aa~aa~~~grPVk~~~sR~e~~~~~~~r~~~~~~~~~~~d 157 (638)
T d1v97a5 78 TQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFM 157 (638)
T ss_dssp HHHHHHHHHTSCGGGEEEEECCCSCCTTTTSSTTHHHHHHHHHHHHHHSSCEEEECCHHHHHHHSCCBCCEEEEEEEEEC
T ss_pred HHHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCEEEEEEEEEE
T ss_conf 99999999789889989996987758877786870899999999998699989997556620657898875899887750
Q ss_pred CCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99939999998983389888851999999965158886668099999998379998886589882456789989999999
Q 000657 890 NEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVA 969 (1370)
Q Consensus 890 ~dG~I~a~~~~~~~d~Ga~~~~s~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~~~~a~RG~G~~q~~fa~E~~id~lA 969 (1370)
+||+|++++++++.|+|+|.+++..++..+.....++|++||++++.+.++||++|.++|||||.+|+.|++|++||++|
T Consensus 158 ~dG~i~a~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~Y~~p~~~~~~~~v~tn~~~~ga~Rg~G~~~~~~a~E~~mD~~A 237 (638)
T d1v97a5 158 KTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVA 237 (638)
T ss_dssp TTSCEEEEEEEEEEEEESSCTTHHHHHHHHHHTTTTTBCCSSEEEEEEEEECSSCCCCCCTTTTHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 14421034577520123346767651000011046640200002443356415566776445666410245778888888
Q ss_pred HHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCC
Q ss_conf 99099989999971588998654575356899899999999826982335756410027984012228974332222234
Q 000657 970 VEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTL 1049 (1370)
Q Consensus 970 ~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~~~~~~g~~~~~ 1049 (1370)
++|||||+|||++|++++|+.+++|+.+++..+.++|+++.+.++|.++.+..+.+++.++|+++|+++.+..+|+++..
T Consensus 238 ~~lg~DP~e~R~~N~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~G~~~~~ 317 (638)
T d1v97a5 238 VTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTV 317 (638)
T ss_dssp HHHTCCHHHHHHHHBCCTTCBCTTCCBCCSCCHHHHHHHHHHHTTHHHHHHHHHHHHHHCSSEEEEEEEEEEEEEESCSS
T ss_pred HHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCEEEEEECCC
T ss_conf 74288812222220356766543201346777066788875445577777776543013653243640041887641245
Q ss_pred CCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 56784359999932980999985855891357999999999819996409995399999899998855514356899999
Q 000657 1050 KLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVL 1129 (1370)
Q Consensus 1050 ~~~~~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~~QiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~ 1129 (1370)
.+.+.+++.|+++.||+|+|.+|++|||||++|+++||+||+||+|+++|+|..+||+.+|++++|++||++.+.|.||+
T Consensus 318 ~~~~~~~a~v~i~~dG~v~v~~g~~d~GqG~~T~~aqi~Ae~LGi~~~~V~v~~~dT~~~p~~~gt~gSr~t~~~G~Av~ 397 (638)
T d1v97a5 318 PFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVY 397 (638)
T ss_dssp GGGCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHHHHHHHHHH
T ss_pred CCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 76775422899936997488447655463025679887676525540126642025777898753256202001056999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCE
Q ss_conf 99999999889976208999999999985314654058888425876545557989874336378999999865788869
Q 000657 1130 DACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDF 1209 (1370)
Q Consensus 1130 ~Ac~~L~~rl~~~~~~~~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~g~~~~~~~~ga~~aEVEVD~~TG~v 1209 (1370)
.||++|+++|.++++.+...++.+....++..+..+...+++..+..+++.....+.++.+|+|+++++|||||++||++
T Consensus 398 ~Aa~~l~~~l~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~eVeVD~~TG~v 477 (638)
T d1v97a5 398 EACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDH 477 (638)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTTCCCEEEEEEECSSCCCBTTTTBSCSCSEEEEEEEEEEEEEETTTCCE
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEEEEEEEECCCCCE
T ss_conf 99999999999998644477622321120234333123331158763200124667764444337899999996057736
Q ss_pred EEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 99789999835854692452025687999999798301000066678779998524689998989998999971299993
Q 000657 1210 HTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLL 1289 (1370)
Q Consensus 1210 ~V~r~~~~~D~G~~iNP~~~~GQIeGg~~qGiG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~YkiP~~~diP~~~~v~~~ 1289 (1370)
+|+|+++++|||++|||.+++||||||++||||++|+|++.||+ +|++++.+|.+|++|++.|+|.+++|.++
T Consensus 478 ~V~r~~~v~D~G~vINP~~v~gQi~Ggi~~GiG~AL~Ee~~~d~-------~G~~~~~~~~dY~ip~~~dvP~~~~v~~~ 550 (638)
T d1v97a5 478 KNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYSP-------EGSLHTRGPSTYKIPAFGSIPTEFRVSLL 550 (638)
T ss_dssp EEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCCBCT-------TSCBCCCSTTTSCCCCGGGSCSEEEEEEC
T ss_pred EEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECC-------CCCCCCCCCCCCCCCCHHHCCCCEEEEEE
T ss_conf 88899999807856698999999998999999999848867998-------99898799000559874427971599994
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC---CCCCCCCCCCCHHHHHHHHCCCCCCC-CCCCCCC
Q ss_conf 0688999987877679766443004999999999998871699---76567889999899999812222355-3388778
Q 000657 1290 KGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGH---TGWFPLDNPATPERIRMACLDEFTAP-FINSEYR 1365 (1370)
Q Consensus 1290 ~~~~~~~~~~gaKGvGE~~~~~~~av~~Ai~nAi~~A~~~~Gv---~~~~~~~~P~Tpe~I~~a~~~~~~~~-~~~~~~~ 1365 (1370)
++.|+|.+|||+||+||++++++++|++||.|||++|++..-. ..|+.+++|+||||||+||+++.++. ....+|+
T Consensus 551 ~~~p~p~~p~GaKGvGE~~~~~~~av~~AI~nAi~~A~g~~~~~~~~~~~~~~lP~TPerV~~Al~~~~~~~~~~~~~~~ 630 (638)
T d1v97a5 551 RDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRAARAQHTNNNTKELFRLDSPATPEKIRNACVDKFTTLCVTGAPGN 630 (638)
T ss_dssp SSCCCTTSGGGBCCCSSTTGGGGHHHHHHHHHHHHHHHHHHTCCCTTCCCCCCBSCCHHHHHHHSCCTTTTTSCSSCCST
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 68999999988634626653432778999999999865321145655564488999999999997657753377898988
Q ss_pred C
Q ss_conf 9
Q 000657 1366 P 1366 (1370)
Q Consensus 1366 ~ 1366 (1370)
-
T Consensus 631 ~ 631 (638)
T d1v97a5 631 C 631 (638)
T ss_dssp T
T ss_pred C
T ss_conf 8
|
| >d1jrob2 d.133.1.1 (B:124-777) Xanthine dehydrogenase chain B, C-terminal domain {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Xanthine dehydrogenase chain B, C-terminal domain species: Rhodobacter capsulatus [TaxId: 1061]
Probab=100.00 E-value=0 Score=1080.00 Aligned_cols=610 Identities=45% Similarity=0.737 Sum_probs=561.5
Q ss_pred CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCH
Q ss_conf 86789999975159999974211138711011248886289999997850456889884799996589849999599882
Q 000657 728 PAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAP 807 (1370)
Q Consensus 728 p~v~~~~~Al~~~a~~~~~~~~~~~Gdv~~af~~~~a~~vve~~~~~~~q~H~~mEp~~a~A~~~~~~g~l~V~sstQ~p 807 (1370)
|+++|++||++++++|++....+.+||++++| ++|+++||++|++++|+|++|||++|+|+|+ +|+|+||++||+|
T Consensus 1 P~v~~~eeAl~~~a~~~~~~~~~~~GDve~af--a~A~~vve~~y~~~~~~h~~mEp~~~~a~~~--~~~l~v~~~tQ~p 76 (654)
T d1jrob2 1 PAILTLDQALAADSRFEGGPVIWARGDVETAL--AGAAHLAEGCFEIGGQEHFYLEGQAALALPA--EGGVVIHCSSQHP 76 (654)
T ss_dssp CCCCSHHHHHHHTCBSSSSCEEEEESCHHHHH--HTCSEEEEEEEEECCBCCCCSSCCEEEEEEE--TTEEEEEECCSCH
T ss_pred CCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHH--HHCCEEEEEEEEECCEEEECCCCCEEEEEEE--CCEEEEEECCCCH
T ss_conf 96656999941899789998314748999998--5399899999998985056776876999997--9989999899688
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCCCEEEEEEEE
Q ss_conf 89999999881999972899936557889999761039999999999707998899948688886217886579999994
Q 000657 808 QKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVG 887 (1370)
Q Consensus 808 ~~vr~~vA~~Lgip~~kV~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~~~k~g 887 (1370)
+.+|..+|++||||++||+|+++++|||||+|.....+.++.||++|+++||||||+|||+|+|+.+++||++.+++|++
T Consensus 77 ~~~r~~~A~~lgl~~~~VrV~~~~vGGgFG~K~~~~~~~~~~aa~~a~~~grPVk~~~sR~e~~~~~~~r~~~~~~~~~~ 156 (654)
T d1jrob2 77 SEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKESQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIG 156 (654)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECCCSCCTTTTSSTHHHHHHHHHHHHHHHSSCEEEECCHHHHHHHSCCBCCEEEEEEEE
T ss_pred HHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCEEEEEEEE
T ss_conf 99999999996998799899958887588778877728999999999987899899975423001457666789999888
Q ss_pred ECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 48999399999989833898888519999999651588866680999999983799988865898824567899899999
Q 000657 888 FTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQR 967 (1370)
Q Consensus 888 ~~~dG~I~a~~~~~~~d~Ga~~~~s~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~~~~a~RG~G~~q~~fa~E~~id~ 967 (1370)
+++||+|++++++++.|.|+|.+.+..+.........++|++||++++.+.|+||+++.++|||||.+|+.|++|++||+
T Consensus 157 ~~~dG~i~a~~~~~~~~~Ga~~~~~~~~~~~~~~~~~g~Y~~p~~~~~~~~v~tn~~~~ga~Rg~G~~~~~fa~E~~~De 236 (654)
T d1jrob2 157 ADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEH 236 (654)
T ss_dssp ECSSSCEEEEEEEEEEEEESSCTTHHHHHHHHHHHTTTTBCCSEEEEEEEEEECSSCCCCCCTTTTHHHHHHHHHHHHHH
T ss_pred ECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECHHHH
T ss_conf 73789688998643202554445457654420002566401323654334664135345521025764543136227777
Q ss_pred HHHHHCCCHHHHHHHHCCCCCCC--------------------CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
Q ss_conf 99990999899999715889986--------------------5457535689989999999982698233575641002
Q 000657 968 VAVEVRKSPEEIREINFQGEGSI--------------------LHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNL 1027 (1370)
Q Consensus 968 lA~~lg~DP~e~R~~Nl~~~g~~--------------------~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~ 1027 (1370)
+|++|||||+|||++|++++++. +++|+.++++.+++||+++++.++|++|++....++.
T Consensus 237 ~A~~lg~DP~e~R~~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~ 316 (654)
T d1jrob2 237 LARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNS 316 (654)
T ss_dssp HHHHTTCCHHHHHHHHBCCCC-----------------CCCCBCTTCCBCCCCCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCC
T ss_conf 78774998899999835685102455567777765202567645557302102158999999873687776555565323
Q ss_pred CCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 79840122289743322222345678435999993298099998585589135799999999981999640999539999
Q 000657 1028 NNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTD 1107 (1370)
Q Consensus 1028 ~~~~~~rGia~~~~~~g~~~~~~~~~~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~~QiaAe~Lgip~~~V~v~~~dT~ 1107 (1370)
.++++++|+++.+..+|+++.....+.+++.|+|++||+|+|.+|++|||||++|+++||+||+||+|+++|+|..+||+
T Consensus 317 ~~~~~g~G~a~~~~~~g~~~~~~~~~~~~a~v~l~~DG~v~v~~g~~d~GQG~~T~~aQiaAe~LGi~~e~V~v~~~DT~ 396 (654)
T d1jrob2 317 TNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTS 396 (654)
T ss_dssp TCSSEEEEEEEEEEEEECSCSSGGGCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETT
T ss_pred CCCCCCEEEEEEEEEEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf 68765348999677677751357677641599993899889983876789867888999999985896203699942688
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------CCHHHHHHHHHCCCCCCEEE
Q ss_conf 98999988555143568999999999999988997620899-------------------99999999853146540588
Q 000657 1108 KVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNF-------------------NSFAELASACYVQRIDLSAH 1168 (1370)
Q Consensus 1108 ~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~-------------------~~~~~~~~~a~~~~~~l~~~ 1168 (1370)
.+|++++|++||++.+.|.||++||++|++||+.+++.+.. ..+.++...++..+..+.+.
T Consensus 397 ~~p~~~gt~~Sr~t~~~G~Av~~Aa~~l~~kl~~~aA~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 476 (654)
T d1jrob2 397 KVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLSAT 476 (654)
T ss_dssp TSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCEEETTEEEETTEEEEHHHHHHHHHHTTCCCEEE
T ss_pred CCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCEECCCEEEECCCCCCHHHHHHHHHHCCCCCCCC
T ss_conf 88866544565442222502333232222223266688609980011202887998577421568999997535774444
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 88425876545557989874336378999999865788869997899998358546924520256879999997983010
Q 000657 1169 GFYITPEIDFDWITGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEE 1248 (1370)
Q Consensus 1169 g~~~~~~~~~~~~~~~g~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~GQIeGg~~qGiG~al~Ee 1248 (1370)
+.|..|...++...+.++++.+|+||++++|||||++||+++|+|+++++|||++|||.+++|||+||++||||++|+|+
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~V~r~~~v~D~G~viNP~~v~gQi~Ggi~~GiG~AL~Ee 556 (654)
T d1jrob2 477 GFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGENRILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEE 556 (654)
T ss_dssp EEEECCSCEEETTTTEEECCSCEEEEEEEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 54468866544223668875544545899999997057957999999999588656989999999989999999997188
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 0006667877999852468999898999899997129999306889-999878776797664430049999999999988
Q 000657 1249 LKWGDAAHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPN-VKAIHSSKAVGEPPFFLASSVFFAIKDAISAAR 1327 (1370)
Q Consensus 1249 ~~~d~~~~~~~~~G~~~~~~~~~YkiP~~~diP~~~~v~~~~~~~~-~~~~~gaKGvGE~~~~~~~av~~Ai~nAi~~A~ 1327 (1370)
+.||+ +|+++|.+|.+|++|++.|+|+.++|.++++ |+ +.+|||+||+||+++++++++.+||.||+. |
T Consensus 557 ~~~d~-------~G~~~~~~~~dY~ip~~~D~P~i~~v~~~e~-p~~~~~p~GakGiGE~~~~~~~~a~~AI~dA~~-a- 626 (654)
T d1jrob2 557 LVWDH-------CGRLMTHAPSTYKIPAFSDRPRIFNVALWDQ-PNREETIFRSKAVGEPPFLLGISAFLALHDACA-A- 626 (654)
T ss_dssp CCBCT-------TSCBSCCSTTTSCCCCGGGSCSEEEEEEECC-CCSSCCGGGBCCCSSGGGGGGHHHHHHHHHHHT-T-
T ss_pred CEECC-------CCCCCCCCHHHCCCCCCHHCCCCCEEEEEEC-CCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHH-H-
T ss_conf 27999-------9989889940252987020588237999837-999999987413556541120889999999998-5-
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 716997656788999989999981222
Q 000657 1328 ADAGHTGWFPLDNPATPERIRMACLDE 1354 (1370)
Q Consensus 1328 ~~~Gv~~~~~~~~P~Tpe~I~~a~~~~ 1354 (1370)
+|++. +.+++|+||||||+|+++.
T Consensus 627 --~G~~~-~~l~~P~TPe~v~~al~~~ 650 (654)
T d1jrob2 627 --CGPHW-PDLQAPATPEAVLAAVRRA 650 (654)
T ss_dssp --SCSSC-CCCCSSCCHHHHHHHHHHH
T ss_pred --HCCCC-CCCCCCCCHHHHHHHHHHH
T ss_conf --46666-5589998999999999986
|
| >d1rm6a2 d.133.1.1 (A:134-769) 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain {Thauera aromatica [TaxId: 59405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain species: Thauera aromatica [TaxId: 59405]
Probab=100.00 E-value=0 Score=1050.69 Aligned_cols=596 Identities=22% Similarity=0.277 Sum_probs=534.4
Q ss_pred CCHHHHHHCCC--CCCC------CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEE
Q ss_conf 89999975159--9999------742111387110112488862899999978504568898847999965898499995
Q 000657 731 LSIQEAIDAKS--FHPN------TERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMIS 802 (1370)
Q Consensus 731 ~~~~~Al~~~a--~~~~------~~~~~~~Gdv~~af~~~~a~~vve~~~~~~~q~H~~mEp~~a~A~~~~~~g~l~V~s 802 (1370)
+|+++|+++++ +|++ ....+.+||++++| ++|++|||++|++++|+|+||||++|+|+|+.++|+|+||+
T Consensus 1 l~p~eAl~~~ap~vh~~~~~Ni~~~~~~~~GD~~~af--~~a~~vve~~y~~~~~~h~~mEp~~~~a~~d~~~~~l~v~~ 78 (636)
T d1rm6a2 1 MTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAF--AEADLIREKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNT 78 (636)
T ss_dssp CSHHHHHSTTCCCSSTTCTTSEEEEEEEEESCHHHHH--HTCSEEEEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEE
T ss_pred CCHHHHHCCCCCEECCCCCCCEEEECCCCCCCHHHHH--HHCCEEEEEEEEECCEEEECCCCCEEEEEEECCCCEEEEEE
T ss_conf 9978970799974079999818874576568999998--43998999999979871336778708999978999899998
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCCCEEE
Q ss_conf 99882899999998819999728999365578899997610399999999997079988999486888862178865799
Q 000657 803 STQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLG 882 (1370)
Q Consensus 803 stQ~p~~vr~~vA~~Lgip~~kV~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~ 882 (1370)
+||+|+.+|..+|++||||++||+|+++++|||||+|.. ...+++.||++|+++||||||+|||+|+|+.+.+||++.+
T Consensus 79 ~tQ~p~~~r~~iA~~lglp~~~V~V~~~~vGGgFG~K~~-~~~~~~~aa~~A~~~grPVk~~~tR~e~~~~~~~r~~~~~ 157 (636)
T d1rm6a2 79 TTQVPYYVHLKVAACLQMDSARIRVIKPFLGGGFGARTE-ALHFEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEV 157 (636)
T ss_dssp CCSCHHHHHHHHHHHHTCCGGGEEEECCBCCCCTTTTSS-CCHHHHHHHHHHHHHTSEEEEECCHHHHHHHCCCBCEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCC-CCHHHHHHHHHHHHHCCCCEECCCHHHHCCCCCCCCCEEE
T ss_conf 994899999999999789879989997987868989887-7649999999999739983520340001042467882155
Q ss_pred EEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99994489993999999898338988885199999996515888666809999999837999888658988245678998
Q 000657 883 KYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITE 962 (1370)
Q Consensus 883 ~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~s~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~~~~a~RG~G~~q~~fa~E 962 (1370)
++|+++|+||+|+|++++++.|+|+|.+.+..++......+.++|++||++++++.|+||++|.++|||||.||+.|++|
T Consensus 158 ~~~~g~~~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~g~Y~ip~~~~~~~~v~TN~~~~ga~Rg~G~pq~~~a~E 237 (636)
T d1rm6a2 158 KMKIGLKKDGKIAALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFE 237 (636)
T ss_dssp EEEEEECTTSCEEEEEEEEEEECCSSCTTHHHHHHHHHHTTSSSBCCSCEEEEEEEECCSSSCCCCCSSTTTHHHHHHHH
T ss_pred EECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCEEHH
T ss_conf 21123445786320356664047865445652221111024663104430377873146875315446753000120014
Q ss_pred HHHHHHHHHHCCCHHHHHHHHCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEEEEE
Q ss_conf 9999999990999899999715889986-545753568998999999998269823357564100279840122289743
Q 000657 963 NWIQRVAVEVRKSPEEIREINFQGEGSI-LHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPT 1041 (1370)
Q Consensus 963 ~~id~lA~~lg~DP~e~R~~Nl~~~g~~-~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~~~~ 1041 (1370)
++||++|++|||||+|||+||+++++.. ++++..+++..+++||+++++.++|+++++... +++++|+++...
T Consensus 238 ~~~D~lA~~lg~DP~e~R~~N~~~~~~~~~~~g~~~~s~~~~~~l~~~~~~~~~~~~~~~~~------~~~g~~~g~~~~ 311 (636)
T d1rm6a2 238 ALLTEMGEELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVPECLEKVKAASGWEERKGKLP------KGRGLGIALSHF 311 (636)
T ss_dssp HHHHHHHHHHTCCHHHHHHHTBCSSSSEECTTCCEECCCCHHHHHHHHHHHHTHHHHTTCSC------TTEEEEEEEEEE
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCEEEEEEE
T ss_conf 67888888618881037887534200033343333466541778999998632455454300------456622432223
Q ss_pred EECCCCCC--CCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCH
Q ss_conf 32222234--5678435999993298099998585589135799999999981999640999539999989999885551
Q 000657 1042 KFGISFTL--KLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASA 1119 (1370)
Q Consensus 1042 ~~g~~~~~--~~~~~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~~QiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr 1119 (1370)
..+.+... ...+.+.+.|+|++||+|+|.+|++|||||++|+++|||||+||+|+++|+|..+||+.+|++++|++||
T Consensus 312 ~~~~~~~~~~~~~~~a~a~v~l~~dG~v~v~~g~~d~GqG~~T~~~QiaAe~LGi~~e~V~v~~~DT~~~p~~~gt~~Sr 391 (636)
T d1rm6a2 312 VSGTSTPKHWTGEPHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSR 391 (636)
T ss_dssp ESSCSSCSSCCCCCSEEEEEEECTTCCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTC
T ss_pred EECCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 20135653445787631268990699768851544654444310556467773966432321024666454778655665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC----------------------CCCCHHHHHHHHHCCCCCCEEEEEEECCCCC
Q ss_conf 435689999999999999889976208----------------------9999999999853146540588884258765
Q 000657 1120 SSDIYGAAVLDACEQIKARMEPIASKH----------------------NFNSFAELASACYVQRIDLSAHGFYITPEID 1177 (1370)
Q Consensus 1120 ~t~~~g~Av~~Ac~~L~~rl~~~~~~~----------------------~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~ 1177 (1370)
+|++.|.|+.+||++|++++..+++.+ +..+|.+++...+.....+...+.|..+...
T Consensus 392 ~t~~~g~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 471 (636)
T d1rm6a2 392 VTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEF 471 (636)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTEEEETTCSSCCEEHHHHHHHHHTTTCSEEEEEEECCCGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCC
T ss_conf 00556678898877766667788876406653431002516998588786404899999987405741222000023333
Q ss_pred CCCC---CCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 4555---7989874336378999999865788869997899998358546924520256879999997983010000666
Q 000657 1178 FDWI---TGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDA 1254 (1370)
Q Consensus 1178 ~~~~---~~~g~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~GQIeGg~~qGiG~al~Ee~~~d~~ 1254 (1370)
.... .....++.+|+||++++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||
T Consensus 472 ~~~~~~~~~~~~~~~~~~~ga~~~eVeVD~~TG~v~v~~~~~v~D~G~viNP~~v~gQi~Gg~~~GiG~aL~Ee~~~d-- 549 (636)
T d1rm6a2 472 QGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYD-- 549 (636)
T ss_dssp SCCTTCGGGGTTCCSCEEEEEEEEEEEECTTTCCEEEEEEEEEEECSSCSSHHHHHHHHHHHHHHHHHHHHTCCCCEE--
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEC--
T ss_conf 454444444567865542245899984046755502458999983785669899999999799999999970874811--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 78779998524689998989998999971299993068899998787767976644300499999999999887169976
Q 000657 1255 AHKWIPPGCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTG 1334 (1370)
Q Consensus 1255 ~~~~~~~G~~~~~~~~~YkiP~~~diP~~~~v~~~~~~~~~~~~~gaKGvGE~~~~~~~av~~Ai~nAi~~A~~~~Gv~~ 1334 (1370)
+|++++.+|++|++|++.|+|+ |++.++|+ ++|.+|||+||+||++++ ++++||+|||++|+ |++
T Consensus 550 ------~G~~~~~~~~~Y~ip~~~d~P~-i~v~~~e~-~~~~~p~GaKGvGE~~~~---~~~~Ai~nAI~~A~---G~r- 614 (636)
T d1rm6a2 550 ------NGRMVHGNILDYRVPTIVESPD-IEVIIVES-MDPNGPFGAKEASEGMLA---GFLPAIHEAVYEAV---GVR- 614 (636)
T ss_dssp ------TTEESCCSTTTSCCCCTTTCCE-EEEEEECC-CCTTSGGGCCCCSSTTTT---THHHHHHHHHHHHH---SCC-
T ss_pred ------CCEECCCCHHHCCCCCCCCCCC-EEEEEECC-CCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHHH---CCC-
T ss_conf ------8967779955385988131788-58999578-999999887704646514---47999999999857---977-
Q ss_pred CCCCCCCCCHHHHHHHHCCC
Q ss_conf 56788999989999981222
Q 000657 1335 WFPLDNPATPERIRMACLDE 1354 (1370)
Q Consensus 1335 ~~~~~~P~Tpe~I~~a~~~~ 1354 (1370)
++++|+|||||++||+..
T Consensus 615 --~~~lP~tpe~v~~al~~~ 632 (636)
T d1rm6a2 615 --ATDFPLSPDRITELLDAK 632 (636)
T ss_dssp --CCEESCCHHHHHHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHHH
T ss_conf --576898999999999865
|
| >d1t3qb2 d.133.1.1 (B:166-786) Quinoline 2-oxidoreductase large subunit QorL {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Quinoline 2-oxidoreductase large subunit QorL species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=1030.43 Aligned_cols=583 Identities=23% Similarity=0.250 Sum_probs=516.1
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 21113871101124888628999999785045688988479999658984999959988289999999881999972899
Q 000657 748 RCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVC 827 (1370)
Q Consensus 748 ~~~~~Gdv~~af~~~~a~~vve~~~~~~~q~H~~mEp~~a~A~~~~~~g~l~V~sstQ~p~~vr~~vA~~Lgip~~kV~V 827 (1370)
....+||++++| ++|++|||++|++++|+|+||||++|+|+|+.++|+|+||++||+|+.+|..+|++||||++||+|
T Consensus 4 ~~~~~gdv~~~f--a~a~~vve~~y~~~~~~h~~mEp~~~~A~~d~~~g~l~v~~stQ~p~~~r~~iA~~Lglp~~~VrV 81 (621)
T d1t3qb2 4 TSRARDELAPIF--ASSAGVVRGQFSCGRVSACPMETRGAVAQYEWTTQQLILWTATQMPSFVRTMVAMFCAIPEHLIEV 81 (621)
T ss_dssp EEEEECCCHHHH--HHSSEEEEEEEEECBBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCCCHHHHH--HCCCEEEEEEEEECCEEEECCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHEEE
T ss_conf 432362689998--309989999999898802377787189999789998999979949999999999997898899799
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCC
Q ss_conf 93655788999976103999999999970799889994868888621788657999999448999399999989833898
Q 000657 828 KTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGN 907 (1370)
Q Consensus 828 ~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d~Ga 907 (1370)
+.+++|||||+|... ....++||++|+++||||||+|||+|+|+.+++||++.+++|+++|+||+|+|++++++.|+|+
T Consensus 82 ~~~~vGGgFG~K~~~-~~~~~~aalaA~~~grPVkl~~sR~E~~~~~~~r~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga 160 (621)
T d1t3qb2 82 RVPDVGGGFGQKAHL-HPEELLVCLLSRALGRPVRWIEDRQENFLGATHAKQQRNEMGLAFDGDGRFLALENRSITDGGA 160 (621)
T ss_dssp ECCBCSCCTTTTSSC-CHHHHHHHHHHHHHTSCEEEECCHHHHHHHSCBBCCEEEEEEEEECTTCCEEEEEEEEEEECCS
T ss_pred EECCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEECHHHHHCCCCCCCCCHHHHCCCCCCCCCEEHHHEEEEECCCC
T ss_conf 918378178767778-9999999999998499999996069972558999740100102413567510221044102433
Q ss_pred CCCCHHHHH---HHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
Q ss_conf 888519999---99965158886668099999998379998886589882456789989999999990999899999715
Q 000657 908 SLDLSLAVL---ERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINF 984 (1370)
Q Consensus 908 ~~~~s~~v~---~~~~~~~~~~Y~ipn~r~~~~~v~TN~~~~~a~RG~G~~q~~fa~E~~id~lA~~lg~DP~e~R~~Nl 984 (1370)
|.+++.... ......+.++|++||++++++.|+||++|.+||||||.+|+.||+|++||++|++|||||+|||+||+
T Consensus 161 y~~~~~~~~~~~~~~~~~~~g~Y~ip~~~~~~~~v~TN~~~~ga~RG~G~~q~~fa~E~~mD~lA~~Lg~DP~e~R~~N~ 240 (621)
T d1t3qb2 161 YNNLPWTQLVESHVGNAVILGVYKVPAVSEESIAVATNKCPIGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRNV 240 (621)
T ss_dssp SCCTTTCGGGTHHHHHHTTTTTBCCSEEEEEEEEECCSSSCBCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHTTB
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHC
T ss_conf 47777663101133332446652102688754442145566875467774311101579999999985898777777611
Q ss_pred CCCCCCCCCC---CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCC------CCCCCE
Q ss_conf 8899865457---5356899899999999826982335756410027984012228974332222234------567843
Q 000657 985 QGEGSILHYG---QQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTL------KLMNQA 1055 (1370)
Q Consensus 985 ~~~g~~~~~g---~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~~~~~~g~~~~~------~~~~~~ 1055 (1370)
+++|+.++.+ ..+++..+.++++.+.+..+|..++...++++..++|+|+|+++.+..++.++.. ...+++
T Consensus 241 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~g~~~~~~~~~~g~~~~~~~~~~~~~~~ 320 (621)
T d1t3qb2 241 VMPEDFPFTNRLGQTHREGTYLQTINLLEEMVNPEAFRQRQAEARARGKYLGLGVSVFNEVTGTGTRTLSFLGTPTTTHD 320 (621)
T ss_dssp CCGGGCSEECTTSCEECSCCHHHHHHHHHHHHCHHHHHHHHHHHHTTTEEEEEEEEEEEEEESCCHHHHHHTTCCCCCCB
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEECCCCCCCCCCCCCCCCCE
T ss_conf 67544543222101124563677666677653003433307988633870432210132320012333331357777721
Q ss_pred EEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 59999932980999985855891357999999999819996409995399999899998855514356899999999999
Q 000657 1056 GALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQI 1135 (1370)
Q Consensus 1056 ~a~V~i~~DGsV~V~~g~~e~GQG~~T~~~QiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~L 1135 (1370)
.+.|+|++||+|+|.+|++|||||++|+++|||||+||+|+|+|.+..+||+. |++++|++||++.+.|.|+..||+++
T Consensus 321 ~a~v~i~~dG~v~v~~g~~e~GQG~~T~~aQiaAe~Lgip~d~V~v~~~dT~~-~~~~gt~~Sr~t~~~g~av~~Aa~~~ 399 (621)
T d1t3qb2 321 SATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGVPASDVVIQAGSTKN-TYGFGAYASRGAVIGAGSIGRAASIV 399 (621)
T ss_dssp EEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEEECSBTTS-CCBCCSCTTCHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC-CCCCCCCCCCCCCCCCHHHHHCCHHH
T ss_conf 69999876642664114443221110157788988615871106444158888-88888757687512210232113568
Q ss_pred HHHHHHHHHHCC----------------------CCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCE
Q ss_conf 998899762089----------------------9999999998531465405888842587654555798987433637
Q 000657 1136 KARMEPIASKHN----------------------FNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTY 1193 (1370)
Q Consensus 1136 ~~rl~~~~~~~~----------------------~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~g~~~~~~~~ 1193 (1370)
+++|+.+++.+. ..+|.+++..++.....+.... ...++.....+.++.+|+|
T Consensus 400 ~~~l~~~aa~~l~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 474 (621)
T d1t3qb2 400 RERVKQLAGHLLEAASEDIVIEDGLVHVAGVPAKGMPFAEVVGAAYFADATHPPGF-----DATLEATATYDPSDLVLAN 474 (621)
T ss_dssp HHHHHHHHHHHHTSCGGGEEEETTEEEETTEEEEEEEHHHHHHHHHHCGGGCCTTC-----CCCCEEEEECCCSSCEEEE
T ss_pred HHHHHHHHHHHCCCCHHHEEEECCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCC-----CCCCCCCCCCCCCCCCEEE
T ss_conf 99998766654058866859858879986783346657888877763466545776-----6432222346888631002
Q ss_pred EEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999998657888699978999983585469245202568799999979830100006667877999852468999898
Q 000657 1194 GAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYK 1273 (1370)
Q Consensus 1194 ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~GQIeGg~~qGiG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~Yk 1273 (1370)
+++++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||+ +|++++.+|++|+
T Consensus 475 ~a~~aeVeVD~~TG~v~V~~~~~~~D~G~~iNP~~v~gQi~Gg~~~GiG~aL~Ee~~~d~-------~G~~~~~~~~~Y~ 547 (621)
T d1t3qb2 475 GGHAAIVEIDASTYATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLLEEVIYDD-------FGQLVTTTLMDYL 547 (621)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCBCBCT-------TSCBCCCSTTTSC
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECC-------CCCCCCCCHHHCC
T ss_conf 578999984134431178457799817643599999999998999999999838817999-------9878889964476
Q ss_pred CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 99989999712999930688999987877679766443004999999999998871699765678899998999998122
Q 000657 1274 IPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACLD 1353 (1370)
Q Consensus 1274 iP~~~diP~~~~v~~~~~~~~~~~~~gaKGvGE~~~~~~~av~~Ai~nAi~~A~~~~Gv~~~~~~~~P~Tpe~I~~a~~~ 1353 (1370)
+|++.|+|+ |++.++|+ ++|.+|||+||+||++++ ++++||.|||++|++..|+| ++++|+|||||++||++
T Consensus 548 ipt~~d~P~-i~v~~ve~-~~~~~p~GaKGvGE~~~~---~~~~AI~nAi~~A~g~~~~r---~~~lP~tpe~v~~al~~ 619 (621)
T d1t3qb2 548 IPTTLDVPD-IRIRHLET-PSPLVPGGIKGMGESAMI---SAPAAVVAAVNDALAHLEVV---IETVPITPERIFRSIQE 619 (621)
T ss_dssp CCCTTTCCC-EEEEECCC-CCTTSGGGBCCCTTHHHH---HHHHHHHHHHHHHHGGGTCC---CCEESCCHHHHHHHHHT
T ss_pred CCCCCCCCC-EEEEEEEC-CCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHHHCCCCCC---CCCCCCCHHHHHHHHHH
T ss_conf 987222788-79999726-999999887235575402---37999999999975776883---16889899999999743
Q ss_pred C
Q ss_conf 2
Q 000657 1354 E 1354 (1370)
Q Consensus 1354 ~ 1354 (1370)
+
T Consensus 620 ~ 620 (621)
T d1t3qb2 620 R 620 (621)
T ss_dssp C
T ss_pred C
T ss_conf 8
|
| >d1n62b2 d.133.1.1 (B:147-809) Carbon monoxide (CO) dehydrogenase molybdoprotein {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Carbon monoxide (CO) dehydrogenase molybdoprotein species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Probab=100.00 E-value=0 Score=1020.42 Aligned_cols=574 Identities=22% Similarity=0.259 Sum_probs=502.0
Q ss_pred CCCCC---CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEE
Q ss_conf 11387---110112488862899999978504568898847999965898499995998828999999988199997289
Q 000657 750 FRKGD---VDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVV 826 (1370)
Q Consensus 750 ~~~Gd---v~~af~~~~a~~vve~~~~~~~q~H~~mEp~~a~A~~~~~~g~l~V~sstQ~p~~vr~~vA~~Lgip~~kV~ 826 (1370)
...|| ++++| ++|++|||++|++++|+|+||||++|+|+|+.++|+|+||++||+|+.+|..+|++||||++|||
T Consensus 38 ~~~Gd~~~v~~af--a~A~~vve~~y~~~~~~h~~mEp~~~vA~~d~~~g~l~v~~stQ~p~~~r~~iA~~Lglp~~~Vr 115 (663)
T d1n62b2 38 WEIGDKEGTDATF--AKAEVVSKDMFTYHRVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIH 115 (663)
T ss_dssp EEEECHHHHHHHH--HHCSEEEEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSSHHHHHHHHHHHHCCCGGGEE
T ss_pred EECCCHHHHHHHH--HCCCEEEEEEEEECCEEEECCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHEE
T ss_conf 7437777899998--42998999999918760126768718999978999899997995999999999998798879989
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCC
Q ss_conf 99365578899997610399999999997079988999486888862178865799999944899939999998983389
Q 000657 827 CKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAG 906 (1370)
Q Consensus 827 V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d~G 906 (1370)
|+++++|||||+|.... ...+.|+++|+++||||||+|||+|+|+++++||++.+++|+|+|+||+|+|++++++.|+|
T Consensus 116 Vi~~~vGGgFG~K~~~~-~~~~~A~~aa~~~grPVkl~~sR~E~~~~~~~R~~~~~~~k~g~d~DG~i~a~~~~~~~d~G 194 (663)
T d1n62b2 116 VIAPDIGGGFGNKVGAY-SGYVCAVVASIVLGVPVKWVEDRMENLSTTSFARDYHMTTELAATKDGKILAMRCHVLADHG 194 (663)
T ss_dssp EECCBCSCCTTTTSSCC-HHHHHHHHHHHHHSSCEEEECCHHHHHHHSCEECCEEEEEEEEECTTCCEEEEEEEEEEECC
T ss_pred EEECCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHEEEEECCC
T ss_conf 99688776798888788-89999999864408985999787772152345655010010210002341022213320122
Q ss_pred CCCCCHHHHH--HHHHHCCCCCCCCCEEEEEEEEEECCCCCCC-CCCCCC-HHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 8888519999--9996515888666809999999837999888-658988-24567899899999999909998999997
Q 000657 907 NSLDLSLAVL--ERAMFHSDNVYEIPNVRIMGNVCFTNFPSNT-AFRGFG-GPQGMLITENWIQRVAVEVRKSPEEIREI 982 (1370)
Q Consensus 907 a~~~~s~~v~--~~~~~~~~~~Y~ipn~r~~~~~v~TN~~~~~-a~RG~G-~~q~~fa~E~~id~lA~~lg~DP~e~R~~ 982 (1370)
+|.+++.... ......+.++|++||++++++.|+||++|.+ +|||+| .||+.|++|++||++|++|||||+|||++
T Consensus 195 ay~~~~~~~~~~~~~~~~~~g~Y~ip~~~~~~~~v~TN~~p~g~a~Rg~g~~pq~~fa~E~~mD~lA~~Lg~DP~e~R~~ 274 (663)
T d1n62b2 195 AFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGGVAYRCSFRVTEAVYAIERAIETLAQRLEMDSADLRIK 274 (663)
T ss_dssp SSCCCCCCTTCTTTTGGGTTTTBCCSCEEEEEEEECCSSCCEESCSSCTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CCCCCCCCCCCCHHHCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_conf 23333466321000013567641566789987761125654441113446673568999998999999974021568887
Q ss_pred HCCCCCCCCCC---CCCCCCCCHHHHHHHHHHHCCCHHHHHHHH----HCCCCCCCCEEEEEEEEEEECCCCCCC-----
Q ss_conf 15889986545---753568998999999998269823357564----100279840122289743322222345-----
Q 000657 983 NFQGEGSILHY---GQQLQHCTLFPLWNELKLSCDFLNARKEVD----NFNLNNRWKKRGIAMVPTKFGISFTLK----- 1050 (1370)
Q Consensus 983 Nl~~~g~~~~~---g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~----~~~~~~~~~~rGia~~~~~~g~~~~~~----- 1050 (1370)
|++++|+.+.. +..++...++.++++..+.++|.+++...+ .++....++++|++++...++.+....
T Consensus 275 N~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~Gi~~~~~~~~~~~~~~~~~ 354 (663)
T d1n62b2 275 NFIQPEQFPYMAPLGWEYDSGNYPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIGISFFTEIVGAGPSKNCDI 354 (663)
T ss_dssp HBCCGGGCSEECTTSCEECCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCSEEEEEEEEEEECCBSCCCTTTCEE
T ss_pred HCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCCC
T ss_conf 33565557644441111587634667899997624677766545445553145656635454588776420100003443
Q ss_pred --CCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf --678435999993298099998585589135799999999981999640999539999989999885551435689999
Q 000657 1051 --LMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAV 1128 (1370)
Q Consensus 1051 --~~~~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~~QiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av 1128 (1370)
....+++.|+|++||+|+|.+|++|||||++|+++||+||+||||+++|++..+||+.+|++++|++||++.+.|.||
T Consensus 355 ~~~~~~~~a~v~i~~DG~v~v~~g~~d~GqG~~T~~~QiaAe~LGip~d~V~v~~~DT~~~p~~~~t~~Sr~t~~~g~Av 434 (663)
T d1n62b2 355 LGVSMFDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAAT 434 (663)
T ss_dssp TTEECCEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCTTTTHHHHH
T ss_pred CCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHH
T ss_conf 11367751799996799787752344567874135689999983996654333247788788877766433201014578
Q ss_pred HHHHHHHHHHHHHHHHHCCC----------------------CCHHHHHHHHHCCC-----CCCEEEEEEECCCCCCCCC
Q ss_conf 99999999988997620899----------------------99999999853146-----5405888842587654555
Q 000657 1129 LDACEQIKARMEPIASKHNF----------------------NSFAELASACYVQR-----IDLSAHGFYITPEIDFDWI 1181 (1370)
Q Consensus 1129 ~~Ac~~L~~rl~~~~~~~~~----------------------~~~~~~~~~a~~~~-----~~l~~~g~~~~~~~~~~~~ 1181 (1370)
+.||++|++||..+++++.. .++.++...++... ..+.+..+|.
T Consensus 435 ~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------- 505 (663)
T d1n62b2 435 AVAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGLPEKFKTMKELAWASYNSPPPNLEPGLEAVNYYD--------- 505 (663)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGEEECSSEEEETTEEEEEEEHHHHHHHHHHSCCTTSCSSCEEEEEEC---------
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC---------
T ss_conf 88888999987654565415663331340783676157633012999999851358766887743212235---------
Q ss_pred CCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 79898743363789999998657888699978999983585469245202568799999979830100006667877999
Q 000657 1182 TGKGNPFRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPP 1261 (1370)
Q Consensus 1182 ~~~g~~~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~GQIeGg~~qGiG~al~Ee~~~d~~~~~~~~~ 1261 (1370)
.++..|+|+++++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||+ +
T Consensus 506 ----~~~~~~~~~a~~~eVeVD~~TG~v~v~r~~~v~D~G~~iNP~~v~gQieGg~~~GiG~AL~Ee~~~d~-------~ 574 (663)
T d1n62b2 506 ----PPNMTYPFGAYFCIMDIDVDTGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIRYDE-------Q 574 (663)
T ss_dssp ----CSSCBCCEEEEEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCEECT-------T
T ss_pred ----CCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECC-------C
T ss_conf ----66566663114899999867574899799999958712498999999998999999999838807998-------9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 85246899989899989999712999930688999987877679766443004999999999998871699765678899
Q 000657 1262 GCLYTCGPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNP 1341 (1370)
Q Consensus 1262 G~~~~~~~~~YkiP~~~diP~~~~v~~~~~~~~~~~~~gaKGvGE~~~~~~~av~~Ai~nAi~~A~~~~Gv~~~~~~~~P 1341 (1370)
|++++.+|++|++|++.|+|+ +++.++++ ++|.+|||+||+||+++++ +++||+|||++|++..|+| ++++|
T Consensus 575 G~~~~~~~~~Y~ip~~~DvP~-i~v~~~e~-~~~~~p~GakGvGE~~~~~---~~~Ai~nAI~~A~~~~G~r---~~~lP 646 (663)
T d1n62b2 575 GNVLGASFMDFFLPTAVETPK-WETDYTVT-PSPHHPIGAKGVGESPHVG---GVPCFSNAVNDAYAFLNAG---HIQMP 646 (663)
T ss_dssp CCEESCSTTTSCCCCTTTSCC-CEEEECCC-CCTTSTTSBCCCTTHHHHH---HHHHHHHHHHHHHHTTTCC---CCCSC
T ss_pred CCCCCCCHHHCCCCCCCCCCC-EEEEEEEC-CCCCCCCCCEECCCCCCCC---HHHHHHHHHHHHHHHCCCC---CCCCC
T ss_conf 988879942257997021688-68999956-9999997861233643044---6999999999999834996---56699
Q ss_pred CCHHHHHHHHCCC
Q ss_conf 9989999981222
Q 000657 1342 ATPERIRMACLDE 1354 (1370)
Q Consensus 1342 ~Tpe~I~~a~~~~ 1354 (1370)
+||||||+++++.
T Consensus 647 ~tpe~v~~~~~~~ 659 (663)
T d1n62b2 647 HDAWRLWKVGEQL 659 (663)
T ss_dssp CCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHC
T ss_conf 9999999999974
|
| >d1ffvb2 d.133.1.1 (B:147-803) Carbon monoxide (CO) dehydrogenase molybdoprotein {Hydrogenophaga pseudoflava [TaxId: 47421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Carbon monoxide (CO) dehydrogenase molybdoprotein species: Hydrogenophaga pseudoflava [TaxId: 47421]
Probab=100.00 E-value=0 Score=1016.65 Aligned_cols=575 Identities=23% Similarity=0.264 Sum_probs=503.8
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 11387110112488862899999978504568898847999965898499995998828999999988199997289993
Q 000657 750 FRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKT 829 (1370)
Q Consensus 750 ~~~Gdv~~af~~~~a~~vve~~~~~~~q~H~~mEp~~a~A~~~~~~g~l~V~sstQ~p~~vr~~vA~~Lgip~~kV~V~~ 829 (1370)
..+||+|++| ++|++|||++|++|+|+|+||||++|+|+|+.++|+|+||++||+|+.+|..+|++||||++||||++
T Consensus 38 g~~gd~~~af--a~A~~vve~~y~~~~~~h~~mEp~~~vA~~d~~~g~l~v~~~tQ~p~~~r~~iA~~Lglp~~~VrV~~ 115 (657)
T d1ffvb2 38 GDKAATDAVF--ANAPVTVSQHMYYPRVHPCPLETCGCVASFDPIKGDLTTYITSQAPHVVRTVVSMLSGIPESKVRIVS 115 (657)
T ss_dssp ECHHHHHHHH--HHCSEEEEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHCCCGGGEEEEC
T ss_pred CCCCCHHHHH--HHCCEEEEEEEEECCEEEECCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHEEEEE
T ss_conf 7731099998--53998999999979861227778739999978999899998984999999999999799879989997
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCC
Q ss_conf 65578899997610399999999997079988999486888862178865799999944899939999998983389888
Q 000657 830 KRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSL 909 (1370)
Q Consensus 830 ~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~~~k~g~~~dG~I~a~~~~~~~d~Ga~~ 909 (1370)
+++|||||+|.... .....|+++++++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+|++++++.|+|+|.
T Consensus 116 ~~vGGgFG~K~~~~-~~~~~a~~aa~~~grPVkl~~sR~e~~~~~~~r~~~~~~~k~g~d~dG~i~a~~~~~~~d~Gay~ 194 (657)
T d1ffvb2 116 PDIGGGFGNKVGIY-PGYVCAIVASIVLGRPVKWVEDRVENISTTAFARDYHMDGELAATPDGKILGLRVNVVADHGAFD 194 (657)
T ss_dssp CCCSCCTTTTSSCC-HHHHHHHHHHHHHTSCEEEECCHHHHHHHSCEECCEEEEEEEEECTTCCEEEEEEEEEEECCSSC
T ss_pred CCCCCCCCCCCCCC-HHHHHHHHHHHHHCCCEEEEEEEHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCC
T ss_conf 98765667778788-89999999977548976999651452034666666115877735578967424456521554432
Q ss_pred CCHHHHH-HHH-HHCCCCCCCCCEEEEEEEEEECCCCCCC-CCC-CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
Q ss_conf 8519999-999-6515888666809999999837999888-658-98824567899899999999909998999997158
Q 000657 910 DLSLAVL-ERA-MFHSDNVYEIPNVRIMGNVCFTNFPSNT-AFR-GFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQ 985 (1370)
Q Consensus 910 ~~s~~v~-~~~-~~~~~~~Y~ipn~r~~~~~v~TN~~~~~-a~R-G~G~~q~~fa~E~~id~lA~~lg~DP~e~R~~Nl~ 985 (1370)
+++..+. ... .....++|++||++++++.|+||++|.+ +|| |||.||+.|++|++||++|++|||||+|||++|++
T Consensus 195 ~~~~~~~~~~~~~~~~~g~Y~ip~~~~~~~~v~TN~~p~g~~~Rgg~g~pq~~fa~E~~mD~lA~~Lg~DP~e~R~~N~~ 274 (657)
T d1ffvb2 195 ACADPTKFPAGLFHICSGSYDIPRAHCSVKGVYTNKAPGGVAYRCSFRVTEAVYLIERMVDVLAQKLNMDKAEIRAKNFI 274 (657)
T ss_dssp CCCCCTTCTTTTGGGTTTTBCCSEEEEEEEEECCSSCCEESCSSCTTTHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHBC
T ss_pred CCCCCCHHHHHHHCCCCCCEECCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 34575114567640145630002179998875313666652021124433679998888877777626689999998522
Q ss_pred CCCCCCCC---CCCCCCCCHHHHHHHHHHHCCCHHHHHH-HHHCCCCCCCCEEEEEEEEEEECCCCCCCC-------CCC
Q ss_conf 89986545---7535689989999999982698233575-641002798401222897433222223456-------784
Q 000657 986 GEGSILHY---GQQLQHCTLFPLWNELKLSCDFLNARKE-VDNFNLNNRWKKRGIAMVPTKFGISFTLKL-------MNQ 1054 (1370)
Q Consensus 986 ~~g~~~~~---g~~~~~~~l~~~l~~~~~~~~~~~r~~~-~~~~~~~~~~~~rGia~~~~~~g~~~~~~~-------~~~ 1054 (1370)
++++.... |..+++..+.++++...+..+|...+.. ...++..+.+++||++++...++.+..... ...
T Consensus 275 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~a~~~~~~g~~~~~~~~~~~~~~~ 354 (657)
T d1ffvb2 275 RKEQFPYTTQFGFEYDSGDYHTALKKVLDAVDYPALRAEQAARRADPNSPTLMGIGLVTFTEVVGAGPSKMCDILGVGMF 354 (657)
T ss_dssp CGGGCSEECTTSCEECCCCHHHHHHHHHHHHTHHHHHHHHHHHHHCTTCSEEEEEEEEEEECCBCCCCTTTCEETTEESC
T ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEECCC
T ss_conf 11123455555654677627776788998753122224566665323688301432378877411332322221012036
Q ss_pred EEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 35999993298099998585589135799999999981999640999539999989999885551435689999999999
Q 000657 1055 AGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQ 1134 (1370)
Q Consensus 1055 ~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~~QiaAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~Ac~~ 1134 (1370)
+++.|+|+.||+|+|.+|++|||||++|+++|||||+||+|+++|+|..+||+.+|++++|++||++++.|.||+.||++
T Consensus 355 ~~a~v~i~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~~~V~v~~~DT~~~P~~~gt~~Sr~t~~~g~Av~~Aa~~ 434 (657)
T d1ffvb2 355 DSCEIRIHPTGSAIARMGTITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTSTAPYGLGTYGSRSTPVAGAAIALAARK 434 (657)
T ss_dssp EEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCHHCCEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH
T ss_conf 72799998336410220012344311356887778871886100310268878698977636654412216678877799
Q ss_pred HHHHHHHHHHHCCC----------------------CCHHHHHHHHHCCCC-----CCEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 99988997620899----------------------999999998531465-----405888842587654555798987
Q 000657 1135 IKARMEPIASKHNF----------------------NSFAELASACYVQRI-----DLSAHGFYITPEIDFDWITGKGNP 1187 (1370)
Q Consensus 1135 L~~rl~~~~~~~~~----------------------~~~~~~~~~a~~~~~-----~l~~~g~~~~~~~~~~~~~~~g~~ 1187 (1370)
|+++|+..++.+.. .+|.++...++.... .+..... .+.+
T Consensus 435 l~~~l~~~aa~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 501 (657)
T d1ffvb2 435 IHAKARKIAAHMLEVNENDLDWEVDRFKVKGDDSKFKTMADIAWQAYHQPPAGLEPGLEAVHY-------------YDPP 501 (657)
T ss_dssp HHHHHHHHHHHHTTSCGGGEEECSSEEEESSCTTCEEEHHHHHHHHHHCCCTTCCSSEEEEEE-------------ECCS
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC-------------CCCC
T ss_conf 999766555664345621230115437975786443308999998640586556677544324-------------6899
Q ss_pred CCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 43363789999998657888699978999983585469245202568799999979830100006667877999852468
Q 000657 1188 FRYFTYGAAFAEVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTC 1267 (1370)
Q Consensus 1188 ~~~~~~ga~~aEVEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~GQIeGg~~qGiG~al~Ee~~~d~~~~~~~~~G~~~~~ 1267 (1370)
+.+|+|+++++|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.||+ +|++++.
T Consensus 502 ~~~~~~~a~~~eVeVD~~TG~v~V~r~~~~~D~G~viNP~~v~gQieGg~~~GiG~aL~Ee~~~d~-------~G~~~~~ 574 (657)
T d1ffvb2 502 NFTYPFGIYLCVVDIDRATGETKVRRFYALDDCGTRINPMIIEGQIHGGLTEGYAVAMGQQMPFDA-------QGNLLGN 574 (657)
T ss_dssp SCBCCEEEEEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCCBCT-------TCCBCSC
T ss_pred CCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECC-------CCCCCCC
T ss_conf 875314899999999823697798099999965756698999999998999999999839658999-------9978869
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 99989899989999712999930688999987877679766443004999999999998871699765678899998999
Q 000657 1268 GPGSYKIPSLNDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERI 1347 (1370)
Q Consensus 1268 ~~~~YkiP~~~diP~~~~v~~~~~~~~~~~~~gaKGvGE~~~~~~~av~~Ai~nAi~~A~~~~Gv~~~~~~~~P~Tpe~I 1347 (1370)
+|++|++|++.|+|+ +++.++++ |+|.+|||+||+||+++++ +++||.|||++|....|++ ++++|+|||||
T Consensus 575 ~~~~Y~ip~~~d~P~-i~v~~~e~-~~~~~p~GaKGvGE~~~~~---~~~Ai~nAI~~A~~~tG~r---~~~lP~Tpe~v 646 (657)
T d1ffvb2 575 TLMDYFLPTAVETPH-WETDHTVT-PSPHHPIGAKGVAESPHVG---SIPTFTAAVVDAFAHVGVT---HLDMPHTSYRV 646 (657)
T ss_dssp STTTSCCCCTTTSCC-CEEEECCC-CCTTSTTCBCCCTTHHHHH---HHHHHHHHHHHHHGGGTCC---CCCSCCCHHHH
T ss_pred CCCCCCCCCCCCCCC-EEEEEEEC-CCCCCCCCCCCCCCCCCCC---HHHHHHHHHHHHHHHHCCC---CCCCCCCHHHH
T ss_conf 900166987121788-79999955-8999998875043754021---6999999999999831984---27799999999
Q ss_pred HHHHCCCC
Q ss_conf 99812222
Q 000657 1348 RMACLDEF 1355 (1370)
Q Consensus 1348 ~~a~~~~~ 1355 (1370)
++||++..
T Consensus 647 ~~al~~~~ 654 (657)
T d1ffvb2 647 WKSLKEHN 654 (657)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHC
T ss_conf 99998627
|
| >d1vlba4 d.133.1.1 (A:311-907) Aldehyde oxidoreductase {Desulfovibrio gigas [TaxId: 879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Aldehyde oxidoreductase species: Desulfovibrio gigas [TaxId: 879]
Probab=100.00 E-value=0 Score=1009.67 Aligned_cols=584 Identities=24% Similarity=0.345 Sum_probs=516.8
Q ss_pred CCHHHHHHCCC--CCCCC-----CCCCCC-CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEE
Q ss_conf 89999975159--99997-----421113-87110112488862899999978504568898847999965898499995
Q 000657 731 LSIQEAIDAKS--FHPNT-----ERCFRK-GDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMIS 802 (1370)
Q Consensus 731 ~~~~~Al~~~a--~~~~~-----~~~~~~-Gdv~~af~~~~a~~vve~~~~~~~q~H~~mEp~~a~A~~~~~~g~l~V~s 802 (1370)
++.++|+++++ +|++. +..+.+ ||++++| ++|++|||++|++++|+|+||||++|+|+|+ ++|+|+||+
T Consensus 1 ~~~~~A~~~dA~~ihp~~~n~~~~~~~~~g~d~~~af--a~A~~vve~~y~~~~~~h~~mEp~~~vA~~~-~~g~l~v~~ 77 (597)
T d1vlba4 1 MSGPAAAAEDAIEIHPGTPNVYFEQPIVKGEDTGPIF--ASADVTVEGDFYVGRQPHMPIEPDVAFAYMG-DDGKCYIHS 77 (597)
T ss_dssp CSHHHHHSTTCCCSSTTSCSEEEEEEEEESSCHHHHH--HHCSEEEEEEEEECCCCCCCSSCCEEEEEEC-TTSCEEEEE
T ss_pred CCHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHH--CCCCEEEEEEEEECCEEEEECCCCEEEEEEC-CCCEEEEEE
T ss_conf 9845737899820069989766787403566789997--4399899999998989781053777999989-998399997
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCCCEEE
Q ss_conf 99882899999998819999728999365578899997610399999999997079988999486888862178865799
Q 000657 803 STQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLG 882 (1370)
Q Consensus 803 stQ~p~~vr~~vA~~Lgip~~kV~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~ 882 (1370)
+||+|+.+|..+|++||||++||||+++++|||||+|.+... ..++|++|+++||||||+|||+|+|+++++||++.+
T Consensus 78 ~tQ~p~~~r~~iA~~Lgl~~~~VrVi~~~vGGgFG~K~~~~~--~~~aa~aA~~~grPVk~~~sR~e~~~~~~~r~~~~~ 155 (597)
T d1vlba4 78 KSIGVHLHLYMIAPGVGLEPDQLVLVANPMGGTFGYKFSPTS--EALVAVAAMATGRPVHLRYNYQQQQQYTGKRSPWEM 155 (597)
T ss_dssp SCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTGGGSCSS--HHHHHHHHHHHSSCEEEECCHHHHHHSSCBCCCEEE
T ss_pred CCCCHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCCH--HHHHHHHHHHHCCCCEEECCHHHHCCCCCCCCCEEE
T ss_conf 983889999999999699879989994888756988786359--999999999769984121132332034566654798
Q ss_pred EEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99994489993999999898338988885199999996515888666809999999837999888658988245678998
Q 000657 883 KYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITE 962 (1370)
Q Consensus 883 ~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~s~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~~~~a~RG~G~~q~~fa~E 962 (1370)
++|+++|+||+|+|++++++.|+|+|.+++..+......++.++|++||++++++.|+||++|.++|||||.||+.|++|
T Consensus 156 ~~~~g~~~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~g~Y~ip~~~~~~~~v~TN~~p~ga~RG~G~~~~~~a~E 235 (597)
T d1vlba4 156 NVKFAAKKDGTLLAMESDWLVDHGPYSEFGDLLTLRGAQFIGAGYNIPNIRGLGRTVATNHVWGSAFRGYGAPQSMFASE 235 (597)
T ss_dssp EEEEEECTTCCEEEEEEEEEEECTTCCTTHHHHHHHHHHHTTTTBCCCEEEEEEEEECCSSCCBCCCTTTTHHHHHHHHH
T ss_pred EEEEEECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHC
T ss_conf 75665223245211256652035664322210023210002454433137898765531467767665732222201112
Q ss_pred HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEEEEEE
Q ss_conf 99999999909998999997158899865457535689989999999982698233575641002798401222897433
Q 000657 963 NWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTK 1042 (1370)
Q Consensus 963 ~~id~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~~~~~ 1042 (1370)
++||++|++|||||+|||++|++++++.+++|+.+++..++++|+++.+..+|..+....+ .+.+++||++++...
T Consensus 236 ~~~D~~A~~lg~DP~e~R~~N~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~rg~g~~~~~ 311 (597)
T d1vlba4 236 CLMDMLAEKLGMDPLELRYKNAYRPGDTNPTGQEPEVFSLPDMIDQLRPKYQAALEKAQKE----STATHKKGVGISIGV 311 (597)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHBCCTTCCCTTSCCCSCCCHHHHHHHHHHHHHHHHHHHHHH----CCSSEEEEEEEEEEE
T ss_pred CHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH----HCCCCCCCCCCCCCC
T ss_conf 2357889871962146899735687764567754455656777877777665433334444----214544210122111
Q ss_pred ECCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHH---CCCCCCEEEECCCCCCCCCCCCCCCCH
Q ss_conf 22222345678435999993298099998585589135799999999981---999640999539999989999885551
Q 000657 1043 FGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAF---NIPLSSVFVSETSTDKVPNASPTAASA 1119 (1370)
Q Consensus 1043 ~g~~~~~~~~~~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~~QiaAe~L---gip~~~V~v~~~dT~~~p~~~~t~~Sr 1119 (1370)
++.++.. .+...+.|+|+.||+|+|.+|.+|||||++|+++||+||.| |||+++|+|..+||+.+|++++|++||
T Consensus 312 ~~~g~~~--~~~~~a~v~l~~dG~v~v~~g~~~~GqG~~T~~~qi~ae~l~~lGi~~e~V~v~~~DT~~~p~~~gt~gSr 389 (597)
T d1vlba4 312 YGSGLDG--PDASEAWAELNADGTITVHTAWEDHGQGADIGCVGTAHEALRPMGVAPEKIKFTWPNTATTPNSGPSGGSR 389 (597)
T ss_dssp EESSSTT--TCEEEEEEEECTTSCEEEECCCCCSSSCHHHHHHHHHHHHHGGGTCCGGGEEECCCBTTTSCCCCCSCTTC
T ss_pred CCCCCCC--CCCCHHEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCEECCCCCCCCCCCCCCCCCC
T ss_conf 1112323--33210002320123310014544555321001221202333303868788530257776789987655514
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEECCC-CCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 43568999999999999988997620899999999998531465405888842587-65455579898743363789999
Q 000657 1120 SSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPE-IDFDWITGKGNPFRYFTYGAAFA 1198 (1370)
Q Consensus 1120 ~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~~~~~~~~a~~~~~~l~~~g~~~~~~-~~~~~~~~~g~~~~~~~~ga~~a 1198 (1370)
++.+.|.||++||++|++++++.++.+. .+..+... .......+.+.... ..++..++.+.++.+|+||++++
T Consensus 390 ~t~~~g~Av~~Aa~~l~~~~~~~aa~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ga~~a 463 (597)
T d1vlba4 390 QQVMTGNAIRVACENLLKACEKPGGGYY--TYDELKAA----DKPTKITGNWTASGATHCDAVTGLGKPFVVYMYGVFMA 463 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHBCTTSSBC--CHHHHHHT----TCCCEEEEEEECTTCBCCCTTTCCSBCCSCEEEEEEEE
T ss_pred CEEEHHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCC----CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 0001104789999999999975414421--20100001----22200110210266443320025688754242148999
Q ss_pred EEEEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99865788869997899998358546924520256879999997983010000666787799985246899989899989
Q 000657 1199 EVEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLN 1278 (1370)
Q Consensus 1199 EVEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~GQIeGg~~qGiG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~YkiP~~~ 1278 (1370)
|||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.|++ . +.++.+|++|++.
T Consensus 464 eVeVD~~TG~v~V~r~~~v~D~G~viNP~~v~gQi~Gg~~~GiG~aL~E~~~~~~-------~----~~~~~~y~~p~~~ 532 (597)
T d1vlba4 464 EVTVDVATGQTTVDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDFEDIK-------K----HATLVGAGFPFIK 532 (597)
T ss_dssp EEEEETTTCCEEEEEEEEEEECSSCSCHHHHHHHHHHHHHHHHHHHHTCCCCSTT-------T----SSSTTTTTCCCGG
T ss_pred EEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCC-------C----CCCCCCCCCCCHH
T ss_conf 9996156565343059999867866698899999985899999999838000467-------8----8884668998766
Q ss_pred CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 99971299993068899998787767976644300499999999999887169976567889999899999812
Q 000657 1279 DVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMACL 1352 (1370)
Q Consensus 1279 diP~~~~v~~~~~~~~~~~~~gaKGvGE~~~~~~~av~~Ai~nAi~~A~~~~Gv~~~~~~~~P~Tpe~I~~a~~ 1352 (1370)
|+|+.+++.++++ |+|.+|||+||+||+++++ +++||.|||++|+ |+| ++++|+||||||+|++
T Consensus 533 d~P~~~~v~~~e~-p~~~~p~GakG~GE~~~~~---~~~AI~nAi~~A~---G~r---~~~lP~tpe~v~~al~ 596 (597)
T d1vlba4 533 QIPDKLDIVYVNH-PRPDGPFGASGVGELPLTS---PHAAIINAIKSAT---GVR---IYRLPAYPEKVLEALK 596 (597)
T ss_dssp GSCSCEEEEECCC-CCTTSGGGCCCCTTGGGSS---HHHHHHHHHHHHH---SCC---CCBSCCCHHHHHHHHH
T ss_pred HCCCCCEEEEECC-CCCCCCCCCCCCCCCCCCC---HHHHHHHHHHHHH---CCC---CCCCCCCHHHHHHHHC
T ss_conf 6898747999657-9999998875241652020---8999999999827---985---6878989999999856
|
| >d1dgja4 d.133.1.1 (A:311-906) Aldehyde oxidoreductase {Desulfovibrio desulfuricans [TaxId: 876]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Aldehyde oxidoreductase species: Desulfovibrio desulfuricans [TaxId: 876]
Probab=100.00 E-value=0 Score=996.88 Aligned_cols=584 Identities=24% Similarity=0.333 Sum_probs=513.7
Q ss_pred CCHHHHHHCCC--CCCC-----CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEC
Q ss_conf 89999975159--9999-----7421113871101124888628999999785045688988479999658984999959
Q 000657 731 LSIQEAIDAKS--FHPN-----TERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISS 803 (1370)
Q Consensus 731 ~~~~~Al~~~a--~~~~-----~~~~~~~Gdv~~af~~~~a~~vve~~~~~~~q~H~~mEp~~a~A~~~~~~g~l~V~ss 803 (1370)
+|++||+++++ +|+. ......+||.+++|..+.|++|+|++|++++|+|+||||++|+|+|+ ++|+|+||++
T Consensus 1 ~~~~eAl~~dAp~vh~~~~n~~~~~~~~~g~~~~~~~~~~A~~Vve~~y~~~~~~h~~mEp~~~~a~~~-~~g~l~v~~~ 79 (596)
T d1dgja4 1 MSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTVPFFNDPANVVAEGSYYTQRQPHLPIEPDVGYGYIN-EQGQVVIHSK 79 (596)
T ss_dssp CSHHHHHSTTCCCSBTTBCSEEEEEEEEESSCSHHHHSCTTSEEEEEEEEECCCCCCCSSCCEEEEEEC-TTSCEEEEEC
T ss_pred CCHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCEEEEEEEEECCEEEECCCCCEEEEEEC-CCCCEEEEEC
T ss_conf 997897089997718998951457875178776788657999899999998988541467865999999-7981999969
Q ss_pred CCCHHHHHHHHHHHHCCCCCC-EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCCCEEE
Q ss_conf 988289999999881999972-8999365578899997610399999999997079988999486888862178865799
Q 000657 804 TQAPQKHQKYVSHVLGLPMSK-VVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLG 882 (1370)
Q Consensus 804 tQ~p~~vr~~vA~~Lgip~~k-V~V~~~~vGGgFGgK~~~~~~~a~~aAlaA~~~grPVkl~~sR~e~~~~~~~R~~~~~ 882 (1370)
||+|+.+|..+|++||+|.+| |+|+.+++|||||+|..... +.++|++|+++||||||+|+|+|+|..+++||++.+
T Consensus 80 tQ~p~~~r~~~A~~lgl~~~~~v~vi~~~vGGgFG~K~~~~~--e~~~a~aa~~~grPVk~~~~R~e~~~~~~~r~~~~~ 157 (596)
T d1dgja4 80 SVAIHLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSPTM--EALVGVAVMATGRPCHLRYNYEQQQNYTGKRSPFWT 157 (596)
T ss_dssp CSCHHHHHHHHHHHHTCCTTTTEEEEECBCSCCTTGGGSCSS--HHHHHHHHHHHCSCEEEECCHHHHHHSSCBCCCEEE
T ss_pred CCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCH--HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEE
T ss_conf 968999999999984978043289993898718988865548--999999999978980676311114345667545610
Q ss_pred EEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99994489993999999898338988885199999996515888666809999999837999888658988245678998
Q 000657 883 KYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITE 962 (1370)
Q Consensus 883 ~~k~g~~~dG~I~a~~~~~~~d~Ga~~~~s~~v~~~~~~~~~~~Y~ipn~r~~~~~v~TN~~~~~a~RG~G~~q~~fa~E 962 (1370)
++|+++|+||+|+|++++++.|+|+|.+++..+...+...+.++|+|||++++++.|+||++|.++|||||.||+.|++|
T Consensus 158 ~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~p~ga~RG~G~p~~~~a~E 237 (596)
T d1dgja4 158 TMRYAADRQGKILAMETDWSVDHGPYSEFGDLLTLRGAQYIGAGYGIANIRGTGRTVATNHCWGAAFRGYGAPESEFPSE 237 (596)
T ss_dssp EEEEEECTTSCEEEEEEEEEEECCSCCTTHHHHHHHHHHHTTTTBCCSEEEEEEEEECCSSCCBCCCTTTTHHHHHHHHH
T ss_pred EEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCHHCCCCCCEEEH
T ss_conf 05673144145415887654023554446753012222102565404689999863024445653101001234430125
Q ss_pred HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEEEEEE
Q ss_conf 99999999909998999997158899865457535689989999999982698233575641002798401222897433
Q 000657 963 NWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTK 1042 (1370)
Q Consensus 963 ~~id~lA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGia~~~~~ 1042 (1370)
++||++|++|||||+|||++|++++|+.++.|+.+++..++++|+++++..+|.+++.. ++.+++++||+++++..
T Consensus 238 ~~~D~~A~~lg~DP~e~R~~N~i~~g~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~rG~G~a~~~ 313 (596)
T d1dgja4 238 VLMDELAEKLGMDPFELRALNCYREGDTTSSGQIPEVMSLPEMFDKMRPYYEESKKRVK----ERSTAEIKRGVGVALGV 313 (596)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHBCCTTCCCTTSCCCSCCCHHHHHHHHHHHHHHHHHHHH----TTCCSSEEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH----HHHCCCCCCCCCEEEEE
T ss_conf 67887777642488999987631478655543342013458889998776777542024----33123234531000012
Q ss_pred ECCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHH---HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCH
Q ss_conf 222223456784359999932980999985855891357999999---99981999640999539999989999885551
Q 000657 1043 FGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQV---AASAFNIPLSSVFVSETSTDKVPNASPTAASA 1119 (1370)
Q Consensus 1043 ~g~~~~~~~~~~~~a~V~i~~DGsV~V~~g~~e~GQG~~T~~~Qi---aAe~Lgip~~~V~v~~~dT~~~p~~~~t~~Sr 1119 (1370)
++.++.. .+...+.|+|++||+|+|.+|++|||||++|+++|| ++++||||+++|+|..+||+.+|++++|++||
T Consensus 314 ~~~g~~~--~~~~~a~v~i~~dG~v~v~~g~~~~GqG~~T~~~qi~~~aae~LGi~~e~V~v~~~DT~~~p~~~~t~gSr 391 (596)
T d1dgja4 314 YGAGLDG--PDTSEAWVELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGITPENIHLVMNDTSKTPNSGPAGGSR 391 (596)
T ss_dssp EEESSSS--SCEEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHTGGGTCCGGGEEEEESBTTTSCCCCCSCTTC
T ss_pred ECCCCCC--CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 2001235--76532499996057531111102357665442334236466631886322212127877788987666767
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 43568999999999999988997620899999999998531465405888842587654555798987433637899999
Q 000657 1120 SSDIYGAAVLDACEQIKARMEPIASKHNFNSFAELASACYVQRIDLSAHGFYITPEIDFDWITGKGNPFRYFTYGAAFAE 1199 (1370)
Q Consensus 1120 ~t~~~g~Av~~Ac~~L~~rl~~~~~~~~~~~~~~~~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~g~~~~~~~~ga~~aE 1199 (1370)
++.+.|.||+.||++|+++|...++.+. .+.+.. ....++.....+..|.. .....+.+.++.+|+|+++++|
T Consensus 392 ~t~~~g~Av~~Aa~~l~~~l~~~aa~~~--~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~a~~~e 464 (596)
T d1dgja4 392 SQVVTGNAIRVACEMLIEGMRKPGGGFF--TPAEMK----AEGRPMRYDGKWTAPAK-DCDAKGQGSPFACYMYGLFLTE 464 (596)
T ss_dssp TTTHHHHHHHHHHHHHHHHTBCSSSSBC--CHHHHH----HTTCCCEEEEEEECSCB-CCCTTSCSBCCSEEEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCC--CHHHHH----HCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCEEEEEEEEE
T ss_conf 5433431579999999999876533456--757753----02432113432125654-4443566786431024689999
Q ss_pred EEEECCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98657888699978999983585469245202568799999979830100006667877999852468999898999899
Q 000657 1200 VEIDTLTGDFHTRMANVILDLGYSLNPAIDVGQIEGAFIQGLGWLALEELKWGDAAHKWIPPGCLYTCGPGSYKIPSLND 1279 (1370)
Q Consensus 1200 VEVD~~TG~v~V~r~~~~~D~G~~iNP~~~~GQIeGg~~qGiG~al~Ee~~~d~~~~~~~~~G~~~~~~~~~YkiP~~~d 1279 (1370)
||||++||+++|+|+++++|||++|||.+++||||||++||||++|+|++.++. .+.++.+|++|++.|
T Consensus 465 VeVD~~TG~v~v~~~~~v~D~G~vINP~~v~gQi~Gg~~~GiG~aL~E~~~~~~-----------~~~~~~~Y~ip~~~d 533 (596)
T d1dgja4 465 VAVEVATGKATVEKMVCVADIGKICNKLVVDGQIYGGLAQGVGLALSEDYEDLK-----------KHSTMGGAGIPSIKM 533 (596)
T ss_dssp EEEETTTTEEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCCSTT-----------TTSSTTTTTCCCGGG
T ss_pred EEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----------CCCCCCCCCCCCHHH
T ss_conf 999615565336689999967856698999999987899999999848112765-----------788942479984644
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 997129999306889999878776797664430049999999999988716997656788999989999981
Q 000657 1280 VPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASSVFFAIKDAISAARADAGHTGWFPLDNPATPERIRMAC 1351 (1370)
Q Consensus 1280 iP~~~~v~~~~~~~~~~~~~gaKGvGE~~~~~~~av~~Ai~nAi~~A~~~~Gv~~~~~~~~P~Tpe~I~~a~ 1351 (1370)
+|.+|++.++|+ |+|.+|||+||+||+++++ +++||.|||++|+ |+| ++++|+||||||+|+
T Consensus 534 ~P~~i~v~~~e~-p~~~~p~GaKGiGE~~~~~---~~~AI~nAI~~A~---G~r---~~~lP~tPe~v~~Al 595 (596)
T d1dgja4 534 IPDDIEIVYVET-PRKDGPFGASGVGEMPLTA---PHAAIINGIYNAC---GAR---VRHLPARPEKVLEAM 595 (596)
T ss_dssp SCSCEEEEECCC-CCTTSGGGBCCCTTGGGSS---HHHHHHHHHHHHH---SCC---CCBSCCCHHHHHHTC
T ss_pred CCCCCEEEEECC-CCCCCCCCCEECCCCCCCC---HHHHHHHHHHHHH---CCC---CCCCCCCHHHHHHHC
T ss_conf 887768999747-9999998860352542020---8999999999967---988---577898999999758
|
| >d1v97a6 d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Xanthine oxidase, domain 3 (?) species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=394.07 Aligned_cols=216 Identities=43% Similarity=0.722 Sum_probs=204.8
Q ss_pred CCCCCCCCCCCCCCC-CCCCCHHHHCCC---CCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEC
Q ss_conf 653355789878877-778982221148---9984125789945880389889999996499967994567421454431
Q 000657 233 PVSYSEIDGSTYTEK-ELIFPPELLLRK---SNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLK 308 (1370)
Q Consensus 233 ~~~~~~~~~~~~~~~-~~~fp~~l~~~~---~~~~~~~~~~~~~~~~P~sl~ell~ll~~~~~a~lvaGgTdl~v~~k~~ 308 (1370)
|.+|++++|.||||+ |+||||+|.... ++++.+++ ++.+||+|+|++||+++++++|++++||||||++++++.+
T Consensus 2 ~~l~~~~~~~pydp~~e~ifpp~l~~~~~~~~~~~~~~~-~~~~w~~P~sl~ea~~ll~~~~~a~~vaGGTdl~~~~~~~ 80 (223)
T d1v97a6 2 PSLFNPEEFMPLDPTQEPIFPPELLRLKDVPPKQLRFEG-ERVTWIQASTLKELLDLKAQHPEAKLVVGNTEIGIEMKFK 80 (223)
T ss_dssp CCSCCGGGSCCCCGGGSCCCCHHHHHHTTSCCCCEEEEC-SSCEEEECCSHHHHHHHHHHCTTCEECSSCTTHHHHHHHS
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECC-CEEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHCC
T ss_conf 665780228689989888579778850528886489879-8379978898999999997689987997063599997435
Q ss_pred CCCCCEEEECCCCCCCCCEEECCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 56542498469964444225519919993145499999999986312898764228999999998425222344222332
Q 000657 309 RMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGN 388 (1370)
Q Consensus 309 ~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vtl~~l~~~l~~~i~~~~~~~~~~~~aL~~~l~~iAs~qVRN~aTiGGN 388 (1370)
...++.+||+++|+||+.|+.++++|+|||++|++++++.+.+.+++++......|++|++++++|||+||||+||||||
T Consensus 81 ~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~l~~~~~~l~~~~~~~~p~l~~a~~~ias~qIRN~aTiGGN 160 (223)
T d1v97a6 81 NQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGN 160 (223)
T ss_dssp CCCCSEEEECTTCGGGTCEEECSSEEEEETTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHTTCBHHHH
T ss_pred CCCCCEEEECCCCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHEEEEEECCH
T ss_conf 57877389703453337167537517871555599999989876541346676654689999997479868456684312
Q ss_pred CCCCCCCCCHHHHHHHCCCEEEEEECCCCEEEEEHHH-HHCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 0225999873689875198999982799869984567-6202666668988089999945899
Q 000657 389 ICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEE-FFLGYRKVDLTSGEILLSIFLPWTR 450 (1370)
Q Consensus 389 l~~asp~sD~~p~L~al~A~v~i~s~~g~~r~ipl~d-F~~g~~~~~L~~~eii~~I~iP~~~ 450 (1370)
||+|+|.||++|+|+||||+|+|.+.+| +|++|+++ ||.||+++.|+++|||++|+||++.
T Consensus 161 l~~a~P~sDl~p~Llal~A~v~l~~~~g-~R~ip~~~~F~~g~~kt~L~~~Eii~~I~iP~~~ 222 (223)
T d1v97a6 161 IITASPISDLNPVFMASGTKLTIVSRGT-RRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSR 222 (223)
T ss_dssp HHHCCTTCSSHHHHHHTTCEEEEEETTE-EEEEECCGGGCCSTTCCSCCTTCEEEEEEEECCC
T ss_pred HHHCCCCCCHHHHHHHHCEEEEEECCCC-EEEEECHHHHCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf 2204424432589886384999983895-3999853534257654458999879999914889
|
| >d1t3qc2 d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Quinoline 2-oxidoreductase medium subunit QorM species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=1.9e-43 Score=310.29 Aligned_cols=172 Identities=20% Similarity=0.337 Sum_probs=162.9
Q ss_pred CCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEEECCCCEEECCCCCHHHHHHH
Q ss_conf 99458803898899999964999679945674214544315654249846996444422551991999314549999999
Q 000657 269 GGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKM 348 (1370)
Q Consensus 269 ~~~~~~~P~sl~ell~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vtl~~l~~~ 348 (1370)
..|+||+|+|++|+++++++++++++||||||++++++.+...++.+|||++|+||+.|+.++++++|||++|++++..+
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~~~~a~~vaGGTdl~~~~~~~~~~p~~lIdl~~i~eL~~i~~~~~~l~IGa~vt~~~l~~~ 83 (176)
T d1t3qc2 4 PAFSYRAPASLQEVIQVLADDPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFRNKTD 83 (176)
T ss_dssp CCCEEECCSSHHHHHHHHHHCTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHHHHHC
T ss_pred CCCEEECCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEECCCHHHHHHHHH
T ss_conf 88426488999999999976899879954783466564420386633375553025316604741220320036888887
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCEEEEEHHHHHC
Q ss_conf 99863128987642289999999984252223442223320225999873689875198999982799869984567620
Q 000657 349 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFL 428 (1370)
Q Consensus 349 l~~~i~~~~~~~~~~~~aL~~~l~~iAs~qVRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~r~ipl~dF~~ 428 (1370)
..+. +.++.|.++++++||+||||+||||||||+++|.||++|+|+||||++++.+.+| +|++|++|||.
T Consensus 84 --~~~~-------~~~p~l~~a~~~ias~qIRn~aTiGGNi~~a~p~~D~~~~Llal~A~v~l~~~~g-~R~vpl~df~~ 153 (176)
T d1t3qc2 84 --PTVA-------KCVPILPKVLAHVAHQAVRNRGTLGGSLAHADAGAEMPFLMATLGATMYIASSAG-VRSVSATDFMK 153 (176)
T ss_dssp --HHHH-------HHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCTTCHHHHHHHHTTCEEEEEETTE-EEEEEHHHHEE
T ss_pred --HHHH-------HHHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHHEEEEECCCC-EEEEEHHHHCC
T ss_conf --6531-------0156999999724781258787514741002301024689999741278607996-69989999504
Q ss_pred CCCCCCCCCCEEEEEEECCCCC
Q ss_conf 2666668988089999945899
Q 000657 429 GYRKVDLTSGEILLSIFLPWTR 450 (1370)
Q Consensus 429 g~~~~~L~~~eii~~I~iP~~~ 450 (1370)
||++++|+++|||++|+||.+.
T Consensus 154 g~~~t~l~~~Eii~~I~iP~Pa 175 (176)
T d1t3qc2 154 GHYFTDLEAGEVLVRVEIPIPA 175 (176)
T ss_dssp ETTEESCCTTCEEEEEEEECCS
T ss_pred CCCCCCCCCCCEEEEEEEECCC
T ss_conf 4021057999569999962788
|
| >d1n62c2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Probab=100.00 E-value=3.6e-43 Score=308.42 Aligned_cols=172 Identities=21% Similarity=0.358 Sum_probs=162.4
Q ss_pred CCCEEEECCCHHHHHHHHHHC-CCCEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEEECCCCEEECCCCCHHHHHH
Q ss_conf 994588038988999999649-9967994567421454431565424984699644442255199199931454999999
Q 000657 269 GGLKWYRPLKLQHLLELKSKY-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLK 347 (1370)
Q Consensus 269 ~~~~~~~P~sl~ell~ll~~~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vtl~~l~~ 347 (1370)
..|+||+|+|++|++++++++ +++++++|||+++++++.+...++.+||+++|+||+.|+.++++++|||++|++++.+
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~~~~~a~~laGGT~l~~~~~~~~~~~~~lidl~~i~el~~I~~~~~~~~iGa~~t~~~~~~ 83 (177)
T d1n62c2 4 GSFDYHRPKSIADAVALLTKLGEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHALIG 83 (177)
T ss_dssp CCCEEECCSSHHHHHHHHHHHGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHHHHH
T ss_pred CCCCEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCHHHHHC
T ss_conf 98646388999999999975399976998247224325305577653346202523408963585699703454887521
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCEEEEEHHHHH
Q ss_conf 99986312898764228999999998425222344222332022599987368987519899998279986998456762
Q 000657 348 MFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFF 427 (1370)
Q Consensus 348 ~l~~~i~~~~~~~~~~~~aL~~~l~~iAs~qVRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~r~ipl~dF~ 427 (1370)
. ..+. +.++.|+++++++||+||||+||||||||+++|.||++|+|+||||+|++.+.+| +|++|++|||
T Consensus 84 ~--~~~~-------~~~p~l~~a~~~~as~qIRn~aTiGGNi~~a~p~~D~~~~Llal~A~v~l~~~~G-~R~vpl~dF~ 153 (177)
T d1n62c2 84 S--DFLA-------AKLPIIRETSLLIADPQIRYMGTIGGNAANGDPGNDMPALMQCLGAAYELTGPEG-ARIVAARDYY 153 (177)
T ss_dssp C--HHHH-------HHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCCTTCSHHHHHHHHTCEEEEEETTE-EEEEEHHHHE
T ss_pred C--HHHH-------HHCCHHHHHHHHCCCHHHEEEEEEECCEECCCCCCHHHHHHHHHCCEEEEECCCC-EEEEEHHHHC
T ss_conf 0--7676-------5364799996413894276899961532014533326899998403148853883-5998999950
Q ss_pred CCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 02666668988089999945899
Q 000657 428 LGYRKVDLTSGEILLSIFLPWTR 450 (1370)
Q Consensus 428 ~g~~~~~L~~~eii~~I~iP~~~ 450 (1370)
.||+++.|+++|||++|+||.++
T Consensus 154 ~g~~~t~l~~~Eii~~I~iP~p~ 176 (177)
T d1n62c2 154 QGAYFTAIEPGELLTAIRIPVPP 176 (177)
T ss_dssp EETTEESCCTTCEEEEEEEECCC
T ss_pred CCCCCCCCCCCCEEEEEEECCCC
T ss_conf 56031345989769999965998
|
| >d1ffvc2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Probab=100.00 E-value=5e-43 Score=307.42 Aligned_cols=172 Identities=27% Similarity=0.389 Sum_probs=162.0
Q ss_pred CCCEEEECCCHHHHHHHHHHC-CCCEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEEECCCCEEECCCCCHHHHHH
Q ss_conf 994588038988999999649-9967994567421454431565424984699644442255199199931454999999
Q 000657 269 GGLKWYRPLKLQHLLELKSKY-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLK 347 (1370)
Q Consensus 269 ~~~~~~~P~sl~ell~ll~~~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vtl~~l~~ 347 (1370)
..|+||+|+|++|++++++++ ++++++|||||++++++.+...++.+||+++|+||+.|+.++++|+|||++|++++.+
T Consensus 4 ~~f~~~~P~sl~Ea~~ll~~~~~~a~~laGGTdl~~~~~~~~~~~~~lidl~~i~eL~~I~~~~~~l~IGA~~t~~~l~~ 83 (177)
T d1ffvc2 4 PRFEYHAPKSVGEAVALLGQLGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVENDLIS 83 (177)
T ss_dssp CCCEEECCSSHHHHHHHHHHHGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEETTEEEEETTCBHHHHHH
T ss_pred CCCEEECCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCEEHHHHHH
T ss_conf 98407898999999999974499988997076057656425368301007665220356850596699753678999973
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCEEEEEHHHHH
Q ss_conf 99986312898764228999999998425222344222332022599987368987519899998279986998456762
Q 000657 348 MFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFF 427 (1370)
Q Consensus 348 ~l~~~i~~~~~~~~~~~~aL~~~l~~iAs~qVRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~r~ipl~dF~ 427 (1370)
+ ..+. +.++.|+++++++||+||||+||||||||+++|.+|++|+|+||||+|+|.+.+| +|++|++|||
T Consensus 84 ~--~~~~-------~~~~~l~~a~~~~as~qIRn~aTiGGni~~~~p~~D~~~~LlAl~A~v~l~~~~g-~r~vpl~df~ 153 (177)
T d1ffvc2 84 S--PIVQ-------ARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDPGNDHPALSIAVEAHFVLEGPNG-RRTVPADGFF 153 (177)
T ss_dssp C--HHHH-------HHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCTTCSHHHHHHHTTCEEEEEETTE-EEEEESTTTE
T ss_pred C--CCCC-------HHHHHHHHHHHCCCCHHHEEEEEECCCEEECCCCCCHHHHHHHHCCEEEEECCCC-EEEEEHHHHC
T ss_conf 9--2101-------5789999998535892156899853636651344413679986234389976995-6998999942
Q ss_pred CCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 02666668988089999945899
Q 000657 428 LGYRKVDLTSGEILLSIFLPWTR 450 (1370)
Q Consensus 428 ~g~~~~~L~~~eii~~I~iP~~~ 450 (1370)
.||+++.|+++|||++|+||...
T Consensus 154 ~g~~~t~l~~~Eii~~I~iP~~~ 176 (177)
T d1ffvc2 154 LGTYMTLLEENEVMVEIRVPAFA 176 (177)
T ss_dssp EETTEESCCTTCEEEEEEEECCC
T ss_pred CCCCCCCCCCCCEEEEEEECCCC
T ss_conf 57452546998669999802788
|
| >d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain {Thauera aromatica [TaxId: 59405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain species: Thauera aromatica [TaxId: 59405]
Probab=100.00 E-value=3e-42 Score=302.10 Aligned_cols=170 Identities=25% Similarity=0.351 Sum_probs=156.9
Q ss_pred CCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEEECCC-CEEECCCCCHHHHHH
Q ss_conf 9945880389889999996499967994567421454431565424984699644442255199-199931454999999
Q 000657 269 GGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDD-GLEIGAAVRLTELLK 347 (1370)
Q Consensus 269 ~~~~~~~P~sl~ell~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~I~EL~~I~~~~~-~l~IGA~vtl~~l~~ 347 (1370)
..|+|++|+|++|+++++++ ++++++|||||+++++|++...|+.+|||++|+||+.|+..++ +|+|||++|++++++
T Consensus 5 ~~F~y~~P~sl~EA~~ll~~-~~a~~lAGGTdL~~~~k~~~~~p~~lIdl~~I~eL~~I~~~~dg~l~IGA~vT~~~l~~ 83 (216)
T d1rm6b2 5 TDFRTHRPATLADAVNALAA-EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEAIAE 83 (216)
T ss_dssp CCCEEECCSSHHHHHHHTTS-TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHHHHHH
T ss_pred CCCEEECCCCHHHHHHHHCC-CCCEEEECCCCHHHHHHCCCCCCCCEECHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHH
T ss_conf 89457689999999998628-99969977754899984365686510356562655202234687079833235688665
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC------------------------------------
Q ss_conf 99986312898764228999999998425222344222332022------------------------------------
Q 000657 348 MFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT------------------------------------ 391 (1370)
Q Consensus 348 ~l~~~i~~~~~~~~~~~~aL~~~l~~iAs~qVRN~aTiGGNl~~------------------------------------ 391 (1370)
+ +.+.+ .|++|+++++++||+||||+|||||||++
T Consensus 84 ~--~~l~~-------~~p~L~~a~~~~as~qIRN~aTiGGNl~~~s~~~~yr~~~~~r~~~~~c~~~~g~~~~~~~~~~~ 154 (216)
T d1rm6b2 84 H--DAIRT-------TWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDR 154 (216)
T ss_dssp C--HHHHH-------HSHHHHHHHHHSSCHHHHHHCBHHHHHTCCCBCTTTSSCHHHHHHTTCBTTBBCSCCSSSTTCSS
T ss_pred H--HHHHH-------HHHHHHHHHHHHCCHHHHCCEECCCCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCEEEECCCCC
T ss_conf 3--32022-------56999999998779999687222411466777322057021268887322557863012126764
Q ss_pred --CCCCCCHHHHHHHCCCEEEEEECCCCEEEEEHHHHHC--CCCCCCCCCCEEEEEEECCCC
Q ss_conf --5999873689875198999982799869984567620--266666898808999994589
Q 000657 392 --ASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFL--GYRKVDLTSGEILLSIFLPWT 449 (1370)
Q Consensus 392 --asp~sD~~p~L~al~A~v~i~s~~g~~r~ipl~dF~~--g~~~~~L~~~eii~~I~iP~~ 449 (1370)
|+|+||++|+|+||||+|+|.+.+| +|++|++|||. |++++.|+++|||++|+||++
T Consensus 155 c~a~p~sD~~p~LlAl~A~v~l~~~~G-~R~vpl~dF~~~~G~~~t~L~~~Eii~~I~iP~~ 215 (216)
T d1rm6b2 155 CYATYHGDVAPALMVLDARAEIVGPAG-KRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPT 215 (216)
T ss_dssp CCCBCCCSHHHHHHHTTCEEEEEETTE-EEEEEGGGGBCSCTTSCBCCCTTCEEEEEEECCC
T ss_pred CCCCCCCHHHHHHHHHCCEEEEECCCC-EEEEEHHHHCCCCCCCCCCCCCCCEEEEEEECCC
T ss_conf 103564106699987099999975995-3998989930152876534699856999991899
|
| >d1jroa4 d.145.1.3 (A:179-345) Xanthine dehydrogenase chain A, domain 3 {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: CO dehydrogenase flavoprotein N-terminal domain-like domain: Xanthine dehydrogenase chain A, domain 3 species: Rhodobacter capsulatus [TaxId: 1061]
Probab=100.00 E-value=9.6e-43 Score=305.49 Aligned_cols=165 Identities=29% Similarity=0.447 Sum_probs=158.2
Q ss_pred EEECCCHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEEECCCCEEECCCCCHHHHHHHHHHH
Q ss_conf 88038988999999649996799456742145443156542498469964444225519919993145499999999986
Q 000657 273 WYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFRKV 352 (1370)
Q Consensus 273 ~~~P~sl~ell~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vtl~~l~~~l~~~ 352 (1370)
||.|+|++|++++++++|++++|+||||++++++.+...++.+|||++|+||+.|+.++++|+|||++|++++.+.+.
T Consensus 2 ~y~P~tl~e~~~l~~~~p~a~~vaGGTdl~~~~~~~~~~~~~~idl~~i~eL~~i~~~~~~l~IGA~vt~~~l~~~~~-- 79 (167)
T d1jroa4 2 AFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAE-- 79 (167)
T ss_dssp CBCCSSHHHHHHHHHHCTTCEEESSCTTTHHHHHTSCCCCCSEEEGGGCGGGSCEEEETTEEEEETTCBHHHHHHHHT--
T ss_pred CCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH--
T ss_conf 988655999999997789987997577589886402247874670100144005775034212464002899987666--
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCEEEEEHHHHHCCCCC
Q ss_conf 31289876422899999999842522234422233202259998736898751989999827998699845676202666
Q 000657 353 VTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLGYRK 432 (1370)
Q Consensus 353 i~~~~~~~~~~~~aL~~~l~~iAs~qVRN~aTiGGNl~~asp~sD~~p~L~al~A~v~i~s~~g~~r~ipl~dF~~g~~~ 432 (1370)
..++.|.++++++|++||||+||||||||+++|.||++|+|+||||++++.+.+| +|++|++|||.||++
T Consensus 80 ---------~~~p~L~~a~~~ia~~qIRn~aTiGGNl~~a~p~~D~~~~L~Al~A~v~l~~~~g-~R~vpl~df~~g~~~ 149 (167)
T d1jroa4 80 ---------GPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGASLTLRRGQE-RRRMPLEDFFLEYRK 149 (167)
T ss_dssp ---------TTCHHHHHHHHTSSCHHHHTTCBHHHHHHHCCTTCSHHHHHHHTTCEEEEEBTTB-CCCCBGGGGEEETTE
T ss_pred ---------HHHHHHHHHHHHHCCHHHHEEEEECCCEEECCCCCCCHHHHHHHHEEEEEECCCC-EEEEEHHHHCCCHHH
T ss_conf ---------3679999999863487562255752522333524553789998542799971884-089888995676133
Q ss_pred CCCCCCEEEEEEECCCC
Q ss_conf 66898808999994589
Q 000657 433 VDLTSGEILLSIFLPWT 449 (1370)
Q Consensus 433 ~~L~~~eii~~I~iP~~ 449 (1370)
++|+++|||++|+||++
T Consensus 150 t~l~~~Eii~~i~iP~~ 166 (167)
T d1jroa4 150 QDRRPGEFVESVTLPKS 166 (167)
T ss_dssp ESCCTTCEEEEEEECSC
T ss_pred HCCCCCCEEEEEECCCC
T ss_conf 16898966999982289
|
| >d1v97a3 d.41.1.1 (A:537-694) Xanthine oxidase, domain 5 (?) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Xanthine oxidase, domain 5 (?) species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.1e-38 Score=277.66 Aligned_cols=153 Identities=43% Similarity=0.617 Sum_probs=142.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCEE
Q ss_conf 995444334345677755654322457----8875577544667333455133423237889996899998568889347
Q 000657 576 VPSTHLSAMQSFHRPSIIGNQDYEITK----HGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARI 651 (1370)
Q Consensus 576 ~~~~~~s~~~~~~r~~~~g~q~~~~~~----~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~~~~vrSp~a~a~I 651 (1370)
+.+.+.|+...|+|++|++.|.|++++ ..++||++++|+|+..|+||+++|++|++.++||||++++|||++||+|
T Consensus 2 ~~~~~~sa~~~~~~~~~~~~q~~~~~~~~~~~~~~VG~~v~r~d~~~kvtG~a~Y~~Di~~~~g~l~~~~vrSp~a~a~I 81 (158)
T d1v97a3 2 LDPTYTSATLLFQKHPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKI 81 (158)
T ss_dssp CSTTTGGGTCCCCCCCCEEEEECCCCCTTCCTTCCTTSCCCCTTHHHHHTTCSCCGGGSCCBTTCEEEEEEECSSSSEEE
T ss_pred CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCCEEEEEECCCCCCCCC
T ss_conf 78641033332477899885034516999986898888244845545151267611478776995799997289567433
Q ss_pred EEECCHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHCCCCEEEEEECCC
Q ss_conf 301000012799989999458889999889877664443367487519859999959999999745656057860686
Q 000657 652 LSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPA 729 (1370)
Q Consensus 652 ~sID~s~A~~~pGVv~vit~~Dipg~n~~~~~~~d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~ 729 (1370)
++||.|+|+++|||++|+|++|+|+.|..+. ..|+|+|++++|+|+|||||+|||+|+++|++|+++|+|+||+||+
T Consensus 82 ~~iD~s~A~~~pGV~~v~T~~Dipg~~~~~~-~~d~p~la~~~V~~~GqpVA~VvAet~~~A~~Aa~~V~V~ye~lPA 158 (158)
T d1v97a3 82 KSIDVSEAQKVPGFVCFLSADDIPGSNETGL-FNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTYEDLPA 158 (158)
T ss_dssp EEEECTTGGGSTTEEEEECGGGCSSCSEEST-TSCEESSCCSEECSTTCEEEEEEESSHHHHHHHHHTCEEEEEECCC
T ss_pred CCCCHHHHHCCCCCEEEEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCEEEEECCCC
T ss_conf 2335177763876228987001634556787-7864001046752179878999989999999996158578861889
|
| >d1t3qb1 d.41.1.1 (B:1-165) Quinoline 2-oxidoreductase large subunit QorL, N-domain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Quinoline 2-oxidoreductase large subunit QorL, N-domain species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=9e-36 Score=257.80 Aligned_cols=142 Identities=32% Similarity=0.443 Sum_probs=129.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCHHCCCCCCEEEEEECCCCCCCCC--
Q ss_conf 788755775446673334551334232378899968999985688893473010000127999899994588899998--
Q 000657 602 KHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR-- 679 (1370)
Q Consensus 602 ~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~~~~vrSp~a~a~I~sID~s~A~~~pGVv~vit~~Dipg~n~-- 679 (1370)
-..+.||++++|+|+.+|+||+++|++|+.+ +||||+++||||++||+|++||+++|+++|||++|+|++|+|+.+.
T Consensus 9 ~~~~~vG~~v~R~d~~~kvtG~a~y~~D~~~-~~~L~~~~vrSp~a~a~I~~id~~~A~~~pGVv~V~T~~D~~~~~~~~ 87 (165)
T d1t3qb1 9 LKKKSIGTSVLRREDTRLLTGRGRYIADLVL-SGMLHVASLRSPFAHARIVSIDVADAQALPGVELVWCGADVAELSQGI 87 (165)
T ss_dssp CCCSSTTSCCCCTTHHHHHTTCCCBGGGCCC-TTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEHHHHHTTCCCE
T ss_pred CCCCCCCCCCCCCCHHHHCCCCCEEECCCCC-CCEEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCC
T ss_conf 2577578987775525545564150305568-980899999647676313301323100477200466500113236675
Q ss_pred ------CCCCCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCC-CCC
Q ss_conf ------89877664443367487519859999959999999745656057860686789999975159-999
Q 000657 680 ------IGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS-FHP 744 (1370)
Q Consensus 680 ------~~~~~~d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~Al~~~a-~~~ 744 (1370)
.+....++|+|++++|||+|||||+|+|+|+++|++|+++|+|+||++|+++|+++|++.++ +|+
T Consensus 88 ~~~~~~~~~~~~~~p~la~~~Vry~G~pia~VvAet~~~A~~Aa~~V~V~ye~l~~v~d~~~Al~~~~~vh~ 159 (165)
T d1t3qb1 88 VATMQVEGFQTTIQPLLANGVTRFVGEIVAVVVASSRAIAEDAAQLIQVEYEELPAVTGIEAALEGEARAND 159 (165)
T ss_dssp EECCSSTTCCCEEECSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEEEECCCCCSHHHHHHCSCCSCT
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHCEEEEEEEECCCCCCHHHHHCCCCCCCC
T ss_conf 234566788898741056888998788178988789999852331228998748875899999358994699
|
| >d1jrob1 d.41.1.1 (B:2-123) Xanthine dehydrogenase chain B, N-terminal domain {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Xanthine dehydrogenase chain B, N-terminal domain species: Rhodobacter capsulatus [TaxId: 1061]
Probab=100.00 E-value=2.8e-34 Score=247.61 Aligned_cols=121 Identities=41% Similarity=0.605 Sum_probs=117.3
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCHHCCCCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 55775446673334551334232378899968999985688893473010000127999899994588899998898776
Q 000657 606 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVA 685 (1370)
Q Consensus 606 ~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~~~~vrSp~a~a~I~sID~s~A~~~pGVv~vit~~Dipg~n~~~~~~~ 685 (1370)
.||++++|+|+..|+||+++|++|+++|+||||++++|||++||+|++||+++|+++|||++|+|++|+|+.|.++....
T Consensus 1 ~IG~~~~R~d~~~kvtG~a~Y~~Di~~p~~~l~~~~vrS~~a~a~I~~iD~~~A~~~pGV~~v~t~~d~p~~~~~~~~~~ 80 (122)
T d1jrob1 1 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLPHDNDASPAPS 80 (122)
T ss_dssp CTTSCCCCTTHHHHHTTCCCCGGGSCCCTTCEEEEEEECSCSSEEEEEEECHHHHTSTTEEEEECGGGCSSCCCCCSSSS
T ss_pred CCCCCCCCCCHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEHHHHHCCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf 98887678344442722668754545768988999998986474312200255641898389997057733364545442
Q ss_pred CCCCCCCCEEEECCCEEEEEEECCHHHHHHHCCCCEEEEEE
Q ss_conf 64443367487519859999959999999745656057860
Q 000657 686 DEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEE 726 (1370)
Q Consensus 686 d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~ 726 (1370)
|+|+|++++|+|+|||||+|||+|+++|++|+++|+|+||+
T Consensus 81 d~p~la~~~V~y~Gqpia~VvA~s~~~A~~Aa~~v~Veye~ 121 (122)
T d1jrob1 81 PEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYAP 121 (122)
T ss_dssp CCCSSCCSEECSTTCEEEEEEESSHHHHHHHHTCCEEEEEE
T ss_pred CCCCCCCCEEEECCCEEEEEEECCHHHHHHHHHCCEEEECC
T ss_conf 13424677488779818999989999999997248688637
|
| >d1rm6a1 d.41.1.1 (A:9-133) 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, N-terminal domain {Thauera aromatica [TaxId: 59405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, N-terminal domain species: Thauera aromatica [TaxId: 59405]
Probab=100.00 E-value=2.4e-34 Score=248.01 Aligned_cols=124 Identities=30% Similarity=0.412 Sum_probs=119.7
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCHHCCCCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 55775446673334551334232378899968999985688893473010000127999899994588899998898776
Q 000657 606 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVA 685 (1370)
Q Consensus 606 ~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~~~~vrSp~a~a~I~sID~s~A~~~pGVv~vit~~Dipg~n~~~~~~~ 685 (1370)
.||++++|+|+..|+||+++|++|+.+ |||||++++|||++||+|++||+++|+++|||++|+|++|+|+.|..+....
T Consensus 2 ~IG~~v~R~d~~~kvtG~a~y~~Di~~-~g~l~~~~vrSp~a~a~i~~id~~~A~~~pGV~~v~t~~dip~~~~~~~~~~ 80 (125)
T d1rm6a1 2 TVGVRTPLVDGVEKVTGKAKYTADIAA-PDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETPVPFGVLPIAE 80 (125)
T ss_dssp CTTSCCCCTTHHHHHHTCCCBGGGCCC-TTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEGGGCCSCBCSSTTCC
T ss_pred CCCCCCCCCCHHHHCCCEEEEECCCCC-CCCEEEEEEECCCCCCCEECCHHHHHHCCCCCEEEEEECCCCCCEEECCCCC
T ss_conf 888877684655664555243357578-9838999973321376224110356761999457877326775113112246
Q ss_pred CCCCCCCCEEEECCCEEEEEEECCHHHHHHHCCCCEEEEEECCCC
Q ss_conf 644433674875198599999599999997456560578606867
Q 000657 686 DEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAI 730 (1370)
Q Consensus 686 d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v 730 (1370)
++++|++++|+|+|||||+|+|+|+++|++|+++|+|+||+||+.
T Consensus 81 ~~~~la~~~V~y~Gqpva~VvA~t~~~A~~Aa~~v~V~ye~lPAy 125 (125)
T d1rm6a1 81 NEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDYEVLPAY 125 (125)
T ss_dssp CBCSSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEEEEECCCC
T ss_pred CCCCCCCCEEEECCCEEEEEEECCHHHHHHHHHCCEEEEECCCCC
T ss_conf 666677866897697379999899999999960682788616889
|
| >d1ffvb1 d.41.1.1 (B:7-146) Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain {Hydrogenophaga pseudoflava [TaxId: 47421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Probab=100.00 E-value=4.9e-34 Score=245.93 Aligned_cols=128 Identities=28% Similarity=0.408 Sum_probs=117.6
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCHHCCCCCCEEEEEECCCCCCCCC-CCC-
Q ss_conf 755775446673334551334232378899968999985688893473010000127999899994588899998-898-
Q 000657 605 TSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR-IGP- 682 (1370)
Q Consensus 605 ~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~~~~vrSp~a~a~I~sID~s~A~~~pGVv~vit~~Dipg~n~-~~~- 682 (1370)
..||++++|+|+..|+||+++|++|+.+ |||||++++|||++||+|++||+++|+++|||++|+|++|+|+.+. +..
T Consensus 10 ~~IG~~v~R~e~~~~vtG~a~Y~~Di~~-~g~l~~~~vrSp~a~a~I~~iD~s~A~~~pGV~~V~T~~Di~~~~~~~~~~ 88 (140)
T d1ffvb1 10 AGMGASRLRKEDARFIQGKGNYVDDIKM-PGMLHMDIVRAPIAHGRIKKIHKDAALAMPGVHAVLTAEDLKPLKLHWMPT 88 (140)
T ss_dssp TCTTCCCCCSSHHHHTTTCCCCGGGCCC-TTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEECHHHHGGGTCSEEEC
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCCC-CCEEEEEEEECCCHHHCCEEEECCHHCCCCCCEEEEEHHHCCCCCCCCCCC
T ss_conf 8578996786536655474651377898-772799997278143052145300220189952354762567645676534
Q ss_pred -CCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHCCCCEEEEEECCCCCCH
Q ss_conf -776644433674875198599999599999997456560578606867899
Q 000657 683 -VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSI 733 (1370)
Q Consensus 683 -~~~d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~ 733 (1370)
...++|+|++++|+|+|||||+|||+|+++|++|+++|+|+||+||+++|+
T Consensus 89 ~~~~~~~~la~~~V~y~GqpvA~VvA~t~~~A~~Aa~~V~V~ye~lp~v~DP 140 (140)
T d1ffvb1 89 LAGDVAAVLADEKVHFQMQEVAIVIADDRYIAADAVEAVKVEYDELPVVIDP 140 (140)
T ss_dssp TTSCEEESSCCSEECSTTCEEEEEEESSHHHHHHHHHHCEEEEEECCCCCCH
T ss_pred CCCCCCCCCCCCCEEECCCCEEEEEECCHHHHHHHHHCCEEEEEECCCCCCC
T ss_conf 5676330405564676158538999699999999970574887758866794
|
| >d1n62b1 d.41.1.1 (B:6-146) Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Probab=100.00 E-value=1.7e-33 Score=242.17 Aligned_cols=127 Identities=30% Similarity=0.369 Sum_probs=116.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCHHCCCCCCEEEEEECCCCCCCCCCC-
Q ss_conf 8875577544667333455133423237889996899998568889347301000012799989999458889999889-
Q 000657 603 HGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIG- 681 (1370)
Q Consensus 603 ~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~~~~vrSp~a~a~I~sID~s~A~~~pGVv~vit~~Dipg~n~~~- 681 (1370)
+.+.||++++|+|+.+|+||+++|++|+.+ |||||++++|||++||+|++||.++|+++|||++|+|++|+|+.+...
T Consensus 12 ~~~~iG~~~~R~d~~~~vtG~a~Y~~Di~~-~g~l~~~~vrSp~a~a~I~~iD~s~A~~~pGV~~V~t~~Di~~~~~~~~ 90 (141)
T d1n62b1 12 KLQGMGCKRKRVEDIRFTQGKGNYVDDVKL-PGMLFGDFVRSSHAHARIKSIDTSKAKALPGVFAVLTAADLKPLNLHYM 90 (141)
T ss_dssp HHTCTTCCCCCTHHHHHTTTCCCBGGGCCC-TTCEEEEEEECSCSSEEEEEEECHHHHHSTTEEEEEEHHHHGGGTCSEE
T ss_pred CCCCCCCCCCCCCHHHHCCEEEEEEECCCC-CCCEEEEEEECCCCCCEEEEEEHHHHHHCCCCCEEEEECCCCCCCCCCC
T ss_conf 577168986865534546213051451477-8807999987120275355111588985379818999001686554444
Q ss_pred --CCCCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHCCCCEEEEEECCCC
Q ss_conf --8776644433674875198599999599999997456560578606867
Q 000657 682 --PVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAI 730 (1370)
Q Consensus 682 --~~~~d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v 730 (1370)
....++++|++++|+|+|||||+|+|+|+++|++|+++|+|+||+||++
T Consensus 91 ~~~~~~~~~~la~~~V~~~GqpvA~VvA~t~~~A~~Aa~~V~V~ye~lP~v 141 (141)
T d1n62b1 91 PTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVL 141 (141)
T ss_dssp ECTTSSEEESSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEEEEECCCC
T ss_pred CCCCCCCEEECCCCCEEECCCEEEEEEECCHHHHHHHHCCCEEEEECCCCC
T ss_conf 234787135516773156686779999799999999960475686627889
|
| >d1vlba3 d.41.1.1 (A:194-310) Aldehyde oxidoreductase, domain 3 {Desulfovibrio gigas [TaxId: 879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: alpha/beta-Hammerhead superfamily: CO dehydrogenase molybdoprotein N-domain-like family: CO dehydrogenase molybdoprotein N-domain-like domain: Aldehyde oxidoreductase, domain 3 species: Desulfovibrio gigas [TaxId: 879]
Probab=99.95 E-value=1.3e-28 Score=208.91 Aligned_cols=105 Identities=38% Similarity=0.563 Sum_probs=95.9
Q ss_pred ECCCCCC--CCCCCEEEEEEECCCCCCEEEEECCHHCCCCCCEEEEEECCCCCCCCCCCCC---------CCCCCCCCCC
Q ss_conf 4232378--8999689999856888934730100001279998999945888999988987---------7664443367
Q 000657 625 EYTDDTP--MPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPV---------VADEELFASE 693 (1370)
Q Consensus 625 ~Y~~Di~--~~~gmL~~~~vrSp~a~a~I~sID~s~A~~~pGVv~vit~~Dipg~n~~~~~---------~~d~~~la~~ 693 (1370)
.|++|+. .|+||||+++||||++||+|++||+++|+++|||++|+|++|+|+.|..+.. ..++|+|+++
T Consensus 1 ~Y~dDi~~~~P~g~l~a~~vrS~~a~a~I~~iD~~~A~~~pGV~~V~T~~Di~~~~~~~~~~~~~~~~~~~~~~pila~~ 80 (117)
T d1vlba3 1 DYGADLGLKMPAGTLHLAMVQAKVSHANIKGIDTSEALTMPGVHSVITHKDVKGKNRITGLITFPTNKGDGWDRPILCDE 80 (117)
T ss_dssp CCHHHHHHTSCTTCEEEEEEECSSSSEEEEEEECHHHHTSTTEEEEECGGGCCSCSEECCSSCCTTCSSCSCCEESSCSS
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 95134265689998999999378335377776612310486205786764566344667631266668888766412776
Q ss_pred EEEECCCEEEEEEECCHHHHHHHCCCCEEEEEECCC
Q ss_conf 487519859999959999999745656057860686
Q 000657 694 VVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPA 729 (1370)
Q Consensus 694 ~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~ 729 (1370)
+|||+|||||+|+|+|+++|++|+++|+|+||+||+
T Consensus 81 ~Vry~GqpVA~VvA~t~~~A~~Aa~~V~V~ye~LPA 116 (117)
T d1vlba3 81 KVFQYGDCIALVCADSEANARAAAEKVKVDLEELPA 116 (117)
T ss_dssp EECSTTCEEEEEEESSHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEECCCEEEEEECCHHHHHHHHCCCEEEEEECCC
T ss_conf 204502537999859899999996057899885688
|
| >d1v97a2 d.15.4.2 (A:3-92) Xanthine oxidase, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Xanthine oxidase, N-terminal domain species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.94 E-value=1.8e-27 Score=201.08 Aligned_cols=89 Identities=54% Similarity=0.971 Sum_probs=84.5
Q ss_pred CEEEEEEECCEEEEECCCCCCCCHHHHHHHC-CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHCCCC
Q ss_conf 3089999989899903689997378998517-997555477888887119998132356771025031233300111389
Q 000657 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEG 96 (1370)
Q Consensus 18 ~~~i~f~lNg~~~~~~~~~~~~~l~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 96 (1370)
++.|.|+|||+++.+.+++|+++|++|||++ +|+|||+||++|+||||||++++.++.++++.|++||||++|+.+++|
T Consensus 1 ~~~i~F~lNG~~~~~~~~~p~~tLl~~LR~~~~ltGtK~GC~~G~CGACTVlv~~~~~~~~~~~~~~vnSCl~~~~~~~g 80 (90)
T d1v97a2 1 ADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHH 80 (90)
T ss_dssp CCCEEEEETTEEEEETTCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTT
T ss_pred CCEEEEEECCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEHHHHHHHCCC
T ss_conf 97489999999988746899988999987443897635376875542018998354566784034466056765977399
Q ss_pred CEEEEECCCC
Q ss_conf 5797752656
Q 000657 97 MHVITVEGVG 106 (1370)
Q Consensus 97 ~~i~T~Eg~~ 106 (1370)
++|+||||||
T Consensus 81 ~~v~TiEGLG 90 (90)
T d1v97a2 81 VAVTTVEGIG 90 (90)
T ss_dssp CEEECGGGTC
T ss_pred CEEEEECCCC
T ss_conf 8899837679
|
| >d1v97a1 a.56.1.1 (A:93-165) Xanthine oxidase, domain 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Xanthine oxidase, domain 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.94 E-value=1.4e-27 Score=201.75 Aligned_cols=71 Identities=65% Similarity=1.271 Sum_probs=68.4
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 999878888999981999999997589999999998099999988999984075244688756999999988
Q 000657 108 RKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFA 179 (1370)
Q Consensus 108 ~~~~~~~iq~~~~~~~~~qCG~Ctpg~v~~~~~ll~~~~~p~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~ 179 (1370)
++++|||||++|+++|++|||||||||||++++||+++++| |+++|+++|+|||||||||++|++|++.++
T Consensus 2 t~~~LhpvQ~Af~~~~a~QCGyCtPG~vm~~~~ll~~~~~p-t~~~i~~alsGnlCRCtgY~~I~~Av~~aa 72 (73)
T d1v97a1 2 TKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRNQPEP-TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 72 (73)
T ss_dssp SSSCCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHHCSSC-CHHHHHHTTTTCCCSSSCSHHHHHHHGGGC
T ss_pred CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC-CHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 97876899999999399878987548999999999818757-799999997804040899889999999985
|
| >d1vlba1 a.56.1.1 (A:81-193) Aldehyde oxidoreductase, domain 2 {Desulfovibrio gigas [TaxId: 879]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Aldehyde oxidoreductase, domain 2 species: Desulfovibrio gigas [TaxId: 879]
Probab=99.94 E-value=2.3e-27 Score=200.27 Aligned_cols=72 Identities=44% Similarity=0.893 Sum_probs=68.9
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCC--CCCCCCCCHHHHHHHHHHHHC
Q ss_conf 9987888899998199999999758999999999809999998899998407--524468875699999998840
Q 000657 109 KHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAG--NLCRCTGYRPIVDAFRVFAKT 181 (1370)
Q Consensus 109 ~~~~~~iq~~~~~~~~~qCG~Ctpg~v~~~~~ll~~~~~p~~~~~i~~~l~g--nlCRCtgy~~i~~a~~~~~~~ 181 (1370)
++.|||||++|+++|++|||||||||||++++||+++++| +++||+++|+| ||||||||++|++|++.++..
T Consensus 2 p~~LhpvQ~Af~~~~~~QCGfCtPG~vms~~~ll~~~~~p-~~~~i~~~l~g~~NlCRCtgY~~I~~Av~~aa~~ 75 (113)
T d1vlba1 2 PENLHPLQKAWVLHGGAQCGFCSPGFIVSAKGLLDTNADP-SREDVRDWFQKHRNACRCTGYKPLVDAVMDAAAV 75 (113)
T ss_dssp TTBCCHHHHHHHHHTCCSSCTTHHHHHHHHHHHHTTCSSC-CHHHHHHHHHHTTCCCSSSCSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 8875799999999189878985258999999999808884-3013999987537836335748999999999999
|
| >d1t3qa1 a.56.1.1 (A:88-168) Quinoline 2-oxidoreductase small subunit QorS, C-domain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Quinoline 2-oxidoreductase small subunit QorS, C-domain species: Pseudomonas putida [TaxId: 303]
Probab=99.94 E-value=3.2e-27 Score=199.29 Aligned_cols=71 Identities=41% Similarity=0.829 Sum_probs=67.6
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 998788889999819999999975899999999980999999889999840752446887569999999884
Q 000657 109 KHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAK 180 (1370)
Q Consensus 109 ~~~~~~iq~~~~~~~~~qCG~Ctpg~v~~~~~ll~~~~~p~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~ 180 (1370)
.++|||||++|+++|++|||||||||||++++||++||.| |++||+++|+|||||||||++|++|++.++.
T Consensus 2 g~~L~pvQ~Af~~~~a~QCGfCtPG~vm~~~~ll~~~~~p-s~~ei~~al~GnlCRCtgY~~I~~Av~~~a~ 72 (81)
T d1t3qa1 2 GEKLNALQDSFRRHHALQCGFCTAGMLATARSILAENPAP-SRDEVREVMSGNLCRCTGYETIIDAITDPAV 72 (81)
T ss_dssp SSSCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHHCSSC-CHHHHHHHGGGSCCSSSCSHHHHHHHTCHHH
T ss_pred CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC-CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 8755799999999089878987417999999998528999-7899999981894738896899999999999
|
| >d1rm6c1 a.56.1.1 (C:82-157) 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, C-terminal domain {Thauera aromatica [TaxId: 59405]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, C-terminal domain species: Thauera aromatica [TaxId: 59405]
Probab=99.93 E-value=7.4e-27 Score=196.82 Aligned_cols=71 Identities=44% Similarity=0.870 Sum_probs=68.0
Q ss_pred CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 987888899998199999999758999999999809999998899998407524468875699999998840
Q 000657 110 HGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKT 181 (1370)
Q Consensus 110 ~~~~~iq~~~~~~~~~qCG~Ctpg~v~~~~~ll~~~~~p~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~ 181 (1370)
..|||||++|+++|++|||||||||||++++||+++|.| |++||+++|+|||||||||++|++|++.++..
T Consensus 2 G~l~~vQ~Af~~~~a~QCGyCtPG~im~~~~ll~~~~~p-s~~ei~~~l~GnlCRCtgY~~I~~Av~~aa~~ 72 (76)
T d1rm6c1 2 GTLSKLQAAFHEKLGTQCGFCTPGMIMASEALLRKNPSP-SRDEIKAALAGNLCRCTGYVKIIKSVETAAAA 72 (76)
T ss_dssp TBCCHHHHHHHHHTCCSSCSSHHHHHHHHHHHHHHCSSC-CHHHHHHHTTTCCCSSSCSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC-CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 975399999999089868987459999999999807895-36789999808927488968999999999998
|
| >d1n62a1 a.56.1.1 (A:82-163) Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Probab=99.93 E-value=8.5e-27 Score=196.40 Aligned_cols=73 Identities=45% Similarity=0.816 Sum_probs=69.2
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 99878888999981999999997589999999998099999988999984075244688756999999988404
Q 000657 109 KHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTN 182 (1370)
Q Consensus 109 ~~~~~~iq~~~~~~~~~qCG~Ctpg~v~~~~~ll~~~~~p~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~~ 182 (1370)
...|||||++|+++|++|||||||||||++++||+++|.| |++||+++|+|||||||||++|++|++.++...
T Consensus 3 dg~l~~vQ~Af~~~~a~QCGfCtPG~im~~~~Ll~~~~~p-t~~eir~~LsGnlCRCtgY~~I~~Av~~aa~~~ 75 (82)
T d1n62a1 3 DGTLSALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENPSP-TEAEIRFGIGGNLCRCTGYQNIVKAIQYAAAKI 75 (82)
T ss_dssp TSCCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHHCSSC-CHHHHHHHTTTCCCSSSTTHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 8875799999999089726886518999999998610020-006799986066050899889999999999986
|
| >d1ffva1 a.56.1.1 (A:82-157) Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain {Hydrogenophaga pseudoflava [TaxId: 47421]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Probab=99.93 E-value=8.6e-27 Score=196.37 Aligned_cols=72 Identities=49% Similarity=0.963 Sum_probs=68.6
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 9987888899998199999999758999999999809999998899998407524468875699999998840
Q 000657 109 KHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKT 181 (1370)
Q Consensus 109 ~~~~~~iq~~~~~~~~~qCG~Ctpg~v~~~~~ll~~~~~p~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~ 181 (1370)
...|||||+||+++|++|||||||||||++++||++|+.| |+++|+++|+|||||||||++|++|++.++..
T Consensus 2 ~g~LhpvQ~Af~~~~a~QCGyCtPG~im~~~~ll~~~~~p-t~~ei~~~lsGnlCRCtgY~~I~~Av~~aa~~ 73 (76)
T d1ffva1 2 KGVLHAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQENPNP-TEAEIRMGMTGNLCRCTGYQNIVKAVQYAARK 73 (76)
T ss_dssp TTBCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHHCSSC-CHHHHHHHTTTCCCSSSCSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC-CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 9754599999999089848986039999999999827440-00799999827837689978999999999998
|
| >d1v97a4 d.87.2.1 (A:415-528) Xanthine oxidase, domain 4 (?) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Xanthine oxidase, domain 4 (?) species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.91 E-value=2.6e-24 Score=179.41 Aligned_cols=114 Identities=46% Similarity=0.743 Sum_probs=106.8
Q ss_pred CCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCC
Q ss_conf 44223445225576200002037899995389514887989998257883432898998863999999999999986413
Q 000657 452 FEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQT 531 (1370)
Q Consensus 452 ~~~~~~~K~~~R~~~d~a~Vn~a~~~~~~~~~~~~~i~~aria~Ggva~~p~ra~~~e~~L~Gk~~~~~~l~~a~~~l~~ 531 (1370)
|+||++||+++|+++|||+||+|+.++++++++ +|+++||+||||+|+|+|++++|++|+||+|+++++++|.+.+.+
T Consensus 1 n~~~~afK~~~Rr~~diAiv~~a~~v~l~~~~~--~i~~~ria~Ggva~~p~r~~~~E~~L~Gk~~~~~~~~~a~~~l~~ 78 (114)
T d1v97a4 1 DEFFSAFKQASRREDDIAKVTCGMRVLFQPGSM--QVKELALCYGGMADRTISALKTTQKQLSKFWNEKLLQDVCAGLAE 78 (114)
T ss_dssp TEEEEEEEEESSSSSCCEEEEEEEEEEESTTSS--BEEEEEEEEESSSSSCEECHHHHHTTTTCBSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCCHHHHHHEEEEEEECCCC--EEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 976688876267521288983207899986999--898999987637764403999999870798899999999999984
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 343577999998466787668899999999832015
Q 000657 532 DIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQME 567 (1370)
Q Consensus 532 e~~~~~~~~~~s~~YR~~la~~ll~k~l~~~~~~~~ 567 (1370)
++.|.++.+++|++||++|+.+||+|||++++++++
T Consensus 79 ~i~p~~d~~g~saeYRk~l~~~ll~k~~~~v~~~lg 114 (114)
T d1v97a4 79 ELSLSPDAPGGMIEFRRTLTLSFFFKFYLTVLKKLG 114 (114)
T ss_dssp HTCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 189986888987999999999999999999998739
|
| >d1jroa1 a.56.1.1 (A:85-166) Xanthine dehydrogenase chain A, domain 2 {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: CO dehydrogenase ISP C-domain like superfamily: CO dehydrogenase ISP C-domain like family: CO dehydrogenase ISP C-domain like domain: Xanthine dehydrogenase chain A, domain 2 species: Rhodobacter capsulatus [TaxId: 1061]
Probab=99.90 E-value=1.6e-24 Score=180.82 Aligned_cols=68 Identities=50% Similarity=0.962 Sum_probs=62.1
Q ss_pred CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 9878888999981999999997589999999998099999988999984075244688756999999988404
Q 000657 110 HGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVFAKTN 182 (1370)
Q Consensus 110 ~~~~~iq~~~~~~~~~qCG~Ctpg~v~~~~~ll~~~~~p~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~~~~~ 182 (1370)
.+|||||++|+++|++|||||||||||++++||+++ +++|+++|+|||||||||++|++|++.++.+.
T Consensus 2 G~LhpvQ~Af~~~~~~QCGyCtPG~vm~~~~ll~~~-----~~~i~~~l~GnlCRCtgY~~I~~Av~~~a~~~ 69 (82)
T d1jroa1 2 GRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAHDRD-----RKDYDDLLAGNLCRCTGYAPILRAAEAAAGEP 69 (82)
T ss_dssp CCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHTT-----CCCHHHHHTTCCCSSSCSHHHHHHHHHHHSSC
T ss_pred CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC-----CHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 975699999999089878987526999999987512-----01599997688665568689999999997589
|
| >d1jroa2 d.15.4.2 (A:1-84) Xanthine dehydrogenase chain A, N-terminal domain {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Xanthine dehydrogenase chain A, N-terminal domain species: Rhodobacter capsulatus [TaxId: 1061]
Probab=99.90 E-value=3.7e-24 Score=178.38 Aligned_cols=82 Identities=44% Similarity=0.657 Sum_probs=75.5
Q ss_pred EEEEEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHCCCCCE
Q ss_conf 08999998989990368999737899851799755547788888711999813235677102503123330011138957
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMH 98 (1370)
Q Consensus 19 ~~i~f~lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g~~ 98 (1370)
|.|+|+|||+.++++..+|+++|++|||+++|+|||+||++|+||||||+||+.. .+++||||++|+++++|++
T Consensus 1 m~i~f~vNG~~~~~~~~~~~~~Ll~~LR~~~ltgtK~GC~~G~CGACtVlvd~~~------~g~~v~SCl~~~~~~~g~~ 74 (84)
T d1jroa2 1 MEIAFLLNGETRRVRIEDPTQSLLELLRAEGLTGTKEGCNEGDCGACTVMIRDAA------GSRAVNACLMMLPQIAGKA 74 (84)
T ss_dssp CEEEEEETTEEEEEECSCTTCBHHHHHHHTTCTTSCCSCSSSSSCTTEEEEEETT------EEEEEETTTCBGGGGTTCE
T ss_pred CEEEEEECCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECC------CCEEEECHHHHHHHHCCCE
T ss_conf 9799999999999875999873999998779966753757756524499997078------9979962798898809989
Q ss_pred EEEECCCC
Q ss_conf 97752656
Q 000657 99 VITVEGVG 106 (1370)
Q Consensus 99 i~T~Eg~~ 106 (1370)
|+|||||+
T Consensus 75 v~TvEGL~ 82 (84)
T d1jroa2 75 LRTIEGIA 82 (84)
T ss_dssp EECGGGSS
T ss_pred EEEECCCC
T ss_conf 99837656
|
| >d1n62a2 d.15.4.2 (A:3-81) Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Probab=99.89 E-value=8.4e-24 Score=175.92 Aligned_cols=78 Identities=28% Similarity=0.517 Sum_probs=73.9
Q ss_pred CEEEEEEECCEEEEECCCCCCCCHHHHHHHC-CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHCCCC
Q ss_conf 3089999989899903689997378998517-997555477888887119998132356771025031233300111389
Q 000657 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEG 96 (1370)
Q Consensus 18 ~~~i~f~lNg~~~~~~~~~~~~~l~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 96 (1370)
+..|.|+|||++++++ ++|+++|++|||++ +|+|||.||++|+||||||++|+ ++++||++|+++++|
T Consensus 1 k~~i~~~lNG~~~~~~-v~p~~~Ll~~LR~~~~ltgtK~GC~~G~CGaCTVlvdg----------~~v~SCl~~~~~~~g 69 (79)
T d1n62a2 1 KAHIELTINGHPVEAL-VEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTVDLDG----------MSVKSCTMFAVQANG 69 (79)
T ss_dssp CEEEEEEETTEEEEEE-ECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEETT----------EEEEGGGSBGGGGTT
T ss_pred CCEEEEEECCEEEEEE-CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECC----------CEEEEEHEEHHHCCC
T ss_conf 9459999999988986-69999699998434297445558753361601897589----------598600307876199
Q ss_pred CEEEEECCCC
Q ss_conf 5797752656
Q 000657 97 MHVITVEGVG 106 (1370)
Q Consensus 97 ~~i~T~Eg~~ 106 (1370)
++|+|||||.
T Consensus 70 ~~I~TvEGLa 79 (79)
T d1n62a2 70 ASITTIEGMA 79 (79)
T ss_dssp CEEECGGGSS
T ss_pred CEEEEECCCC
T ss_conf 8999728479
|
| >d1ffva2 d.15.4.2 (A:3-81) Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain {Hydrogenophaga pseudoflava [TaxId: 47421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Probab=99.89 E-value=1.4e-23 Score=174.45 Aligned_cols=78 Identities=33% Similarity=0.571 Sum_probs=74.1
Q ss_pred CEEEEEEECCEEEEECCCCCCCCHHHHHHHC-CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHCCCC
Q ss_conf 3089999989899903689997378998517-997555477888887119998132356771025031233300111389
Q 000657 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEG 96 (1370)
Q Consensus 18 ~~~i~f~lNg~~~~~~~~~~~~~l~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 96 (1370)
+..|+|+|||+.++++ ++|+++|++|||++ +|+|||.||++|+||||||++|+ ++++||++|+.+++|
T Consensus 1 k~~i~~~vNG~~~~~~-v~~~~~Ll~~LR~~~gl~gtK~GC~~G~CGaCTVlvdg----------~~v~SCl~~~~~~~g 69 (79)
T d1ffva2 1 KKIITVNVNGKAQEKA-VEPRTLLIHFLREELNLTGAHIGCETSHCGACTVDIDG----------RSVKSCTHLAVQCDG 69 (79)
T ss_dssp CEEEEEEETTEEEEEE-ECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEETT----------EEEEGGGSBGGGGTT
T ss_pred CCEEEEEECCEEEEEE-CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCC----------CEEEEEHHHHHHCCC
T ss_conf 9379999999988986-79999799998444297434557765561514794089----------498870551877499
Q ss_pred CEEEEECCCC
Q ss_conf 5797752656
Q 000657 97 MHVITVEGVG 106 (1370)
Q Consensus 97 ~~i~T~Eg~~ 106 (1370)
++|+|+|||.
T Consensus 70 ~~I~TiEGLa 79 (79)
T d1ffva2 70 SEVLTVEGLA 79 (79)
T ss_dssp CEEECGGGTS
T ss_pred CEEEEECCCC
T ss_conf 7799846479
|
| >d1t3qa2 d.15.4.2 (A:7-87) Quinoline 2-oxidoreductase small subunit QorS, N-domain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Quinoline 2-oxidoreductase small subunit QorS, N-domain species: Pseudomonas putida [TaxId: 303]
Probab=99.89 E-value=1.5e-23 Score=174.29 Aligned_cols=78 Identities=35% Similarity=0.671 Sum_probs=74.4
Q ss_pred CEEEEEEECCEEEEECCCCCCCCHHHHHHHC-CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHCCCC
Q ss_conf 3089999989899903689997378998517-997555477888887119998132356771025031233300111389
Q 000657 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEG 96 (1370)
Q Consensus 18 ~~~i~f~lNg~~~~~~~~~~~~~l~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 96 (1370)
-|+|.|+|||++++++ ++|+++|++|||+. +|+|+|.||++|+||||||++|+ ++++||++|+.+++|
T Consensus 3 ~~~i~~~vNG~~~~~~-~~~~~~Ll~~LR~~l~ltg~K~gC~~G~CGACtVlvdG----------~~v~sCl~~~~~~~g 71 (81)
T d1t3qa2 3 LMRISATINGKPRVFY-VEPRMHLADALREVVGLTGTKIGCEQGVCGSCTILIDG----------APMRSCLTLAVQAEG 71 (81)
T ss_dssp CEEEEEEETTEEEEEE-ECTTSBHHHHHHHTTCCTTSCCSCSSSSSCTTEEEETT----------EEEEGGGSBGGGGTT
T ss_pred EEEEEEEECCEEEEEE-CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC----------CEEEEHHHEHHHCCC
T ss_conf 3899999989988986-69999799997444189423448787666730797789----------798600206766499
Q ss_pred CEEEEECCCC
Q ss_conf 5797752656
Q 000657 97 MHVITVEGVG 106 (1370)
Q Consensus 97 ~~i~T~Eg~~ 106 (1370)
++|+|+|||.
T Consensus 72 ~~V~TiEGLa 81 (81)
T d1t3qa2 72 CSIETVEGLS 81 (81)
T ss_dssp CEEECGGGTC
T ss_pred CEEEEECCCC
T ss_conf 8999706479
|
| >d1rm6c2 d.15.4.2 (C:1-81) 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, N-terminal domain {Thauera aromatica [TaxId: 59405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, N-terminal domain species: Thauera aromatica [TaxId: 59405]
Probab=99.89 E-value=1.6e-23 Score=174.02 Aligned_cols=78 Identities=40% Similarity=0.592 Sum_probs=74.4
Q ss_pred CEEEEEEECCEEEEECCCCCCCCHHHHHHHC-CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHCCCC
Q ss_conf 3089999989899903689997378998517-997555477888887119998132356771025031233300111389
Q 000657 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEG 96 (1370)
Q Consensus 18 ~~~i~f~lNg~~~~~~~~~~~~~l~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g 96 (1370)
+..|+|+|||++++++ ++|+++|++|||++ +|+|+|.||++|+||||||++|+ ++++||++|+.+++|
T Consensus 2 ~~~i~~~lNG~~~~~~-v~~~~~Ll~~LR~~lgltgtK~gC~~G~CGACTVlvdG----------~~v~sC~~~~~~~~g 70 (81)
T d1rm6c2 2 KNILRLTLNGRAREDL-VPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLVDD----------RPRLACSTLAHQVAG 70 (81)
T ss_dssp EEEEEEEETTEEEEEE-EETTCBHHHHHHHTTCCTTSCCCSSSSSSCTTEEEETT----------EEEEGGGSBGGGGTT
T ss_pred CCEEEEEECCEEEEEE-CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECC----------CEEEEHHHHHHHCCC
T ss_conf 7369999999998986-69999899999776099466647766667722895779----------558544763988199
Q ss_pred CEEEEECCCC
Q ss_conf 5797752656
Q 000657 97 MHVITVEGVG 106 (1370)
Q Consensus 97 ~~i~T~Eg~~ 106 (1370)
++|+|||||+
T Consensus 71 ~~I~TvEgL~ 80 (81)
T d1rm6c2 71 KKVETVESLA 80 (81)
T ss_dssp SEEECGGGSS
T ss_pred CEEEEECCCC
T ss_conf 8899708676
|
| >d1vlba2 d.15.4.2 (A:1-80) Aldehyde oxidoreductase, N-terminal domain {Desulfovibrio gigas [TaxId: 879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Aldehyde oxidoreductase, N-terminal domain species: Desulfovibrio gigas [TaxId: 879]
Probab=99.89 E-value=1.5e-23 Score=174.21 Aligned_cols=77 Identities=39% Similarity=0.740 Sum_probs=73.0
Q ss_pred EEEEEEECCEEEEECCCCCCCCHHHHHHHC-CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHCC-CC
Q ss_conf 089999989899903689997378998517-9975554778888871199981323567710250312333001113-89
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL-EG 96 (1370)
Q Consensus 19 ~~i~f~lNg~~~~~~~~~~~~~l~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~-~g 96 (1370)
+++.|+|||++++++ ++|+++|++|||++ +|+|+|.||++|+||||||++|+ ++++||++|++++ ||
T Consensus 2 ~~~~~~lNG~~~~~~-v~~~~~Lld~LR~~lgltg~K~gC~~G~CGACtVlvdG----------~~v~SCl~~~~~~adG 70 (80)
T d1vlba2 2 IQKVITVNGIEQNLF-VDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVILDG----------KVVRACVTKMKRVADG 70 (80)
T ss_dssp EEEEEEETTEEEEEE-ECTTSBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEETT----------EEEEGGGCBGGGSCTT
T ss_pred CEEEEEECCEEEEEE-CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC----------CEEECHHHHHHHHCCC
T ss_conf 469999989798986-69999799999675199523547576788724898899----------1886036419877599
Q ss_pred CEEEEECCCC
Q ss_conf 5797752656
Q 000657 97 MHVITVEGVG 106 (1370)
Q Consensus 97 ~~i~T~Eg~~ 106 (1370)
++|+||||||
T Consensus 71 ~~I~TiEGLG 80 (80)
T d1vlba2 71 AQITTIEGVG 80 (80)
T ss_dssp CEEECHHHHC
T ss_pred CEEEECCCCC
T ss_conf 9899717689
|
| >d1dgja2 d.15.4.2 (A:1-80) Aldehyde oxidoreductase, N-terminal domain {Desulfovibrio desulfuricans [TaxId: 876]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Aldehyde oxidoreductase, N-terminal domain species: Desulfovibrio desulfuricans [TaxId: 876]
Probab=99.88 E-value=3.3e-23 Score=171.90 Aligned_cols=77 Identities=39% Similarity=0.694 Sum_probs=72.3
Q ss_pred EEEEEEECCEEEEECCCCCCCCHHHHHHHC-CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHCC-CC
Q ss_conf 089999989899903689997378998517-9975554778888871199981323567710250312333001113-89
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL-EG 96 (1370)
Q Consensus 19 ~~i~f~lNg~~~~~~~~~~~~~l~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~-~g 96 (1370)
..+.|+|||+.++++ ++|+++|++|||++ +|+|||.||++|+||||||++|+ ++++||++|+.++ +|
T Consensus 2 ~~~~~~vNG~~~~~~-v~p~~~Ll~~LR~~~gltgtK~GC~~G~CGACtV~vdG----------~~v~SC~~~la~~a~G 70 (80)
T d1dgja2 2 ETKTLIVNGMARRLL-VSPNDLLVDVLRSQLQLTSVKVGCGKGQCGACTVILDG----------KVVRACIIKMSRVAEN 70 (80)
T ss_dssp EEEECEETTBCCEEE-ECTTCBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEETT----------EEEEGGGCBGGGSCTT
T ss_pred CEEEEEECCEEEEEE-CCCCCCHHHHHHHHHCCCEECCCCCCCCCCEEEEEECC----------EEEECHHHHHHHHCCC
T ss_conf 628999999989997-69999899998666298200347777778741899999----------1985015318877599
Q ss_pred CEEEEECCCC
Q ss_conf 5797752656
Q 000657 97 MHVITVEGVG 106 (1370)
Q Consensus 97 ~~i~T~Eg~~ 106 (1370)
++|+||||||
T Consensus 71 ~~I~TiEGLG 80 (80)
T d1dgja2 71 ASVTTLEGIG 80 (80)
T ss_dssp CEEECGGGTC
T ss_pred CEEEECCCCC
T ss_conf 9899717689
|
| >d1jroa3 d.87.2.1 (A:346-462) Xanthine dehydrogenase chain A, domain 4 {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Xanthine dehydrogenase chain A, domain 4 species: Rhodobacter capsulatus [TaxId: 1061]
Probab=99.82 E-value=7e-20 Score=149.11 Aligned_cols=109 Identities=17% Similarity=0.299 Sum_probs=100.9
Q ss_pred CEEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 22344522557620000203789999538951488798999825788343289899886399999999999998641334
Q 000657 454 FVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDI 533 (1370)
Q Consensus 454 ~~~~~K~~~R~~~d~a~Vn~a~~~~~~~~~~~~~i~~aria~Ggva~~p~ra~~~e~~L~Gk~~~~~~l~~a~~~l~~e~ 533 (1370)
++++||+++|+++|||+|++|+.+++++ + +|+++||+|||++++|+|+.++|++|+||+|++++++++.+.+.+++
T Consensus 2 ~~~~yK~~~R~~~dia~v~~A~~~~~~~-~---~i~~~ria~G~v~~~P~r~~~~e~~L~gk~~~~~~~~~a~~~~~~~i 77 (117)
T d1jroa3 2 GLRCYKLSKRFDQDISAVCGCLNLTLKG-S---KIETARIAFGGMAGVPKRAAAFEAALIGQDFREDTIAAALPLLAQDF 77 (117)
T ss_dssp TCEEEEECSSSSSCCCSEEEEEEEEEET-T---EEEEEEEEEESSSSSCEECHHHHHHHTTSBCSHHHHHHHGGGHHHHC
T ss_pred CCCCCEEEECCCCHHHHHEEEEEEEECC-C---CEEEEEEEECCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
T ss_conf 7400065302244365657158999758-9---56789998424587576569999997068887678999999998508
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 3577999998466787668899999999832015
Q 000657 534 ILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQME 567 (1370)
Q Consensus 534 ~~~~~~~~~s~~YR~~la~~ll~k~l~~~~~~~~ 567 (1370)
.|. ++.++|++||++|+.+|++|++.++..+..
T Consensus 78 ~Pi-~D~ras~~YR~~l~~~L~~R~l~e~~~~~~ 110 (117)
T d1jroa3 78 TPL-SDMRASAAYRMNAAQAMALRYVRELSGEAV 110 (117)
T ss_dssp CCC-CBTTBCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 987-889989999999999999999999734734
|
| >d1ffvc1 d.87.2.1 (C:178-287) Carbon monoxide (CO) dehydrogenase flavoprotein, C-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Carbon monoxide (CO) dehydrogenase flavoprotein, C-terminal domain species: Hydrogenophaga pseudoflava [TaxId: 47421]
Probab=99.71 E-value=7.7e-17 Score=128.31 Aligned_cols=107 Identities=17% Similarity=0.195 Sum_probs=96.6
Q ss_pred EEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 23445225576200002037899995389514887989998257883432898998863999999999999986413343
Q 000657 455 VKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDII 534 (1370)
Q Consensus 455 ~~~~K~~~R~~~d~a~Vn~a~~~~~~~~~~~~~i~~aria~Ggva~~p~ra~~~e~~L~Gk~~~~~~l~~a~~~l~~e~~ 534 (1370)
.++|+..+|+..|||+|++|+.+++++ + +|+++||++||++++|+|+.++|++|.|++|++++++++.+.+.+++.
T Consensus 3 g~~y~k~~Rr~~d~a~v~~a~~~~~~~-~---~i~~~ria~ggv~~~P~r~~~~e~~L~G~~~~~~~~~~a~~~~~~~~~ 78 (110)
T d1ffvc1 3 GWAYEKLKRKTGDWATAGCAVVMRKSG-N---TVSHIRIALTNVAPTALRAEAAEAALLGKAFTKEAVQAAADAAIAICE 78 (110)
T ss_dssp EEEEEEECSSTTSCCSEEEEEEEEEET-T---EEEEEEEEEESSSSSCEECHHHHHTTBTSBCCHHHHHHHHHHHHHTCC
T ss_pred CEEEEEECCCCHHHHHHHHEEEEEEEC-C---EEEEEEEEEECCCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 656899278730376873116899729-9---798999998536875676044443303776666899999999984079
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 57799999846678766889999999983201
Q 000657 535 LKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQM 566 (1370)
Q Consensus 535 ~~~~~~~~s~~YR~~la~~ll~k~l~~~~~~~ 566 (1370)
|.+ ++++|++||++|+.+|++|++.++.++.
T Consensus 79 p~~-d~r~s~~YR~~l~~~l~~Ral~~a~~ra 109 (110)
T d1ffvc1 79 PAE-DLRGDADYKTAMAGQMVKRALNAAWARC 109 (110)
T ss_dssp CCC-BTTBCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 755-6798999999999999999999999861
|
| >d1n62c1 d.87.2.1 (C:178-286) Carbon monoxide (CO) dehydrogenase flavoprotein, C-terminal domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Carbon monoxide (CO) dehydrogenase flavoprotein, C-terminal domain species: Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
Probab=99.69 E-value=2.1e-16 Score=125.30 Aligned_cols=105 Identities=15% Similarity=0.185 Sum_probs=95.3
Q ss_pred EEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 34452255762000020378999953895148879899982578834328989988639999999999999864133435
Q 000657 456 KEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIIL 535 (1370)
Q Consensus 456 ~~~K~~~R~~~d~a~Vn~a~~~~~~~~~~~~~i~~aria~Ggva~~p~ra~~~e~~L~Gk~~~~~~l~~a~~~l~~e~~~ 535 (1370)
++|+..+|+..|||+|++|+.+++++ + +|+++||+|||++++|+|+.++|+.|.|+.+++++++++.+.+.+++.|
T Consensus 4 ~ay~k~~Rr~~d~a~v~vA~~~~~d~-g---~i~~~ria~ggv~~~p~r~~~~e~~L~g~~~~~~~~~~a~~~~~~~~~p 79 (109)
T d1n62c1 4 YAYEKLKRKIGDYATAAAAVVLTMSG-G---KCVTASIGLTNVANTPLWAEEAGKVLVGTALDKPALDKAVALAEAITAP 79 (109)
T ss_dssp EEEEEECSSTTCCCSEEEEEEEEEET-T---EEEEEEEEEESSSSSCEECHHHHHHHTTSCCCHHHHHHHHHHHHHHCCC
T ss_pred EEEEEECCCCCHHHHHHHEEEEEEEC-C---EEEEEEEEEECCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 58899688730277870304899969-9---0999999997566715526777888707751067899999999844566
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 779999984667876688999999998320
Q 000657 536 KEDAPGGMVDFRKSLTLSFFFKFFLWVSHQ 565 (1370)
Q Consensus 536 ~~~~~~~s~~YR~~la~~ll~k~l~~~~~~ 565 (1370)
.++ +++|++||++|+.+|+.|++.++.++
T Consensus 80 ~~D-~ras~~YR~~l~~~L~~Ral~~a~~r 108 (109)
T d1n62c1 80 ASD-GRGPAEYRTKMAGVMLRRAVERAKAR 108 (109)
T ss_dssp CCB-TTBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-CCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 557-88899999999999999999999954
|
| >d1t3qc1 d.87.2.1 (C:177-285) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: Quinoline 2-oxidoreductase medium subunit QorM species: Pseudomonas putida [TaxId: 303]
Probab=99.68 E-value=4.1e-16 Score=123.36 Aligned_cols=106 Identities=22% Similarity=0.224 Sum_probs=95.2
Q ss_pred EEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 23445225576200002037899995389514887989998257883432898998863999999999999986413343
Q 000657 455 VKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDII 534 (1370)
Q Consensus 455 ~~~~K~~~R~~~d~a~Vn~a~~~~~~~~~~~~~i~~aria~Ggva~~p~ra~~~e~~L~Gk~~~~~~l~~a~~~l~~e~~ 534 (1370)
+.|.|++ |+..|+|+|++|+.+++++ + +|+++||++||++++|+|++++|++|+||.+++++++++.+.+.+++.
T Consensus 2 ~~f~k~~-Rr~~d~a~v~vA~~~~~~~-g---~i~~~ria~G~v~~~p~r~~~~E~~L~G~~~~~~~~~~a~~~~~~~~~ 76 (109)
T d1t3qc1 2 WEFDEYA-RRKGDYALVMAAAGLSMQG-G---RCVAARIALGAVEERAHQAIRANDFLVGKVIDESTAATAAELATEGLE 76 (109)
T ss_dssp EEEEEEC-SSTTSCCSEEEEEEEEEET-T---EEEEEEEEEESSSSSCEECHHHHHHHTTCCCCHHHHHHHHHHHHTTCC
T ss_pred CCEEEEC-CCCCHHHHHHHHEEEEEEC-C---EEEEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 3708856-8741178985652799859-9---898999999776881465799999872897415799999999885457
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 57799999846678766889999999983201
Q 000657 535 LKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQM 566 (1370)
Q Consensus 535 ~~~~~~~~s~~YR~~la~~ll~k~l~~~~~~~ 566 (1370)
|. ++.++|++||++|+.+|++|++.++.++.
T Consensus 77 p~-~D~ras~~YR~~l~~~l~~Ral~~a~~~a 107 (109)
T d1t3qc1 77 PR-SDIHGSRDLRLSLAKAITQRVILKAAQGA 107 (109)
T ss_dssp CC-CBTTBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 65-57898999999999999999999998623
|
| >d1rm6b1 d.87.2.1 (B:217-323) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, C-terminal domain {Thauera aromatica [TaxId: 59405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CO dehydrogenase flavoprotein C-domain-like superfamily: CO dehydrogenase flavoprotein C-terminal domain-like family: CO dehydrogenase flavoprotein C-terminal domain-like domain: 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, C-terminal domain species: Thauera aromatica [TaxId: 59405]
Probab=99.62 E-value=1.8e-15 Score=118.95 Aligned_cols=103 Identities=13% Similarity=0.135 Sum_probs=93.8
Q ss_pred EEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 23445225576200002037899995389514887989998257883432898998863999999999999986413343
Q 000657 455 VKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDII 534 (1370)
Q Consensus 455 ~~~~K~~~R~~~d~a~Vn~a~~~~~~~~~~~~~i~~aria~Ggva~~p~ra~~~e~~L~Gk~~~~~~l~~a~~~l~~e~~ 534 (1370)
..|.|+++|...|||++++|+.+++++ + +|+++||++||++|+|+|+. |+.|.|+.|++++++++.+.+.+++.
T Consensus 4 ~~y~K~~~R~a~D~a~v~vAv~~~~~~-g---~i~~~ria~ggv~~~P~r~~--e~~l~G~~~~~~~i~~~a~~~~~~~~ 77 (107)
T d1rm6b1 4 AAYSKVRIRDAVDFPLAGVAAALQRDG-D---RIAGLRVAITGSNSAPLMVP--VDALLGGNWDDAAAETLAQLVRKTSN 77 (107)
T ss_dssp EEEEEECSSSSSCCCSEEEEEEEEEET-T---EEEEEEEEEESSSSSCEECC--CGGGTTSCCSHHHHHHHHHHHHHHCC
T ss_pred CEEEEECCCCCHHHHHHHHHHEEEECC-C---CEEEEEEEEECCCCCEEEHH--HHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 351571468501888981752389749-9---68899998605678125407--65754898881589999999998713
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 577999998466787668899999999832
Q 000657 535 LKEDAPGGMVDFRKSLTLSFFFKFFLWVSH 564 (1370)
Q Consensus 535 ~~~~~~~~s~~YR~~la~~ll~k~l~~~~~ 564 (1370)
|.++ .++|++||++|+.+|+.|++.++++
T Consensus 78 P~~D-~~asa~YR~~l~~~L~~Ral~~~~e 106 (107)
T d1rm6b1 78 VLRT-TITGVKYRRRVLLAISRKVVDQLWE 106 (107)
T ss_dssp CCTT-SSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC-CCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0124-5589999999999999999999971
|
| >d1kf6b2 d.15.4.2 (B:1-105) Fumarate reductase iron-sulfur protein, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Fumarate reductase iron-sulfur protein, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.31 E-value=6.7e-07 Score=60.33 Aligned_cols=66 Identities=24% Similarity=0.312 Sum_probs=53.8
Q ss_pred EEEEECCCCCCCCHHHHHHH----C-CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHCCCCCEEEEE
Q ss_conf 89990368999737899851----7-997555477888887119998132356771025031233300111389579775
Q 000657 28 LRKVLPDGLAHLTLLEYLRD----I-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1370)
Q Consensus 28 ~~~~~~~~~~~~~l~~~LR~----~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g~~i~T~ 102 (1370)
+.++++ +++++++|+.|+. + +--+-+.+|.+|.||+|+|.+|| ++..+|.+++..+.+ .+||
T Consensus 24 ~~y~v~-~~~~~tvLd~L~~Ik~~~d~sLsfr~sCr~giCGsCam~ING----------~~~LAC~t~v~~~~~--~i~i 90 (105)
T d1kf6b2 24 AFYEVP-YDATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNN----------VPKLACKTFLRDYTD--GMKV 90 (105)
T ss_dssp EEEEEE-ECTTCBHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEETT----------EEEEGGGCBGGGCTT--CEEE
T ss_pred EEEEEE-CCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECC----------CCCCCCEEEEECCCC--CEEE
T ss_conf 999980-699982999999999722874268762578888877588788----------434551237001599--8399
Q ss_pred CCCC
Q ss_conf 2656
Q 000657 103 EGVG 106 (1370)
Q Consensus 103 Eg~~ 106 (1370)
|-|.
T Consensus 91 ePl~ 94 (105)
T d1kf6b2 91 EALA 94 (105)
T ss_dssp ECCT
T ss_pred EECC
T ss_conf 8799
|
| >d2bs2b2 d.15.4.2 (B:1-106) Fumarate reductase iron-sulfur protein, N-terminal domain {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Fumarate reductase iron-sulfur protein, N-terminal domain species: Wolinella succinogenes [TaxId: 844]
Probab=97.89 E-value=3.2e-05 Score=48.85 Aligned_cols=67 Identities=21% Similarity=0.274 Sum_probs=53.8
Q ss_pred EEEEECCCCCCCCHHHHHHH----C-CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHCCCCCEEEEE
Q ss_conf 89990368999737899851----7-997555477888887119998132356771025031233300111389579775
Q 000657 28 LRKVLPDGLAHLTLLEYLRD----I-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1370)
Q Consensus 28 ~~~~~~~~~~~~~l~~~LR~----~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~~g~~i~T~ 102 (1370)
+.++++ .+|++++|+.|.. . +--+-+.+|.+|.||+|++.+|| ++..+|.+.+..+.+. .+|+
T Consensus 24 ~~y~v~-~~~~~tvld~L~~Ik~~~D~sl~fr~sCr~giCGsCam~ING----------~~~lAC~t~v~~~~~~-~i~i 91 (106)
T d2bs2b2 24 QEYKIE-EAPSMTIFIVLNMIRETYDPDLNFDFVCRAGICGSCGMMING----------RPSLACRTLTKDFEDG-VITL 91 (106)
T ss_dssp EEEEEE-CCTTCBHHHHHHHHHHHTCTTCCCCCSSSSSSSCTTEEEETT----------EEEEGGGCBGGGCTTS-EEEE
T ss_pred EEEEEC-CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECC----------CCCCCEEEEEECCCCC-EEEE
T ss_conf 999946-889981999999998740896799707688899866679899----------2221003554035898-2899
Q ss_pred CCCC
Q ss_conf 2656
Q 000657 103 EGVG 106 (1370)
Q Consensus 103 Eg~~ 106 (1370)
|=+.
T Consensus 92 ePl~ 95 (106)
T d2bs2b2 92 LPLP 95 (106)
T ss_dssp ECCT
T ss_pred EECC
T ss_conf 7899
|
| >d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain domain: Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain species: Staphylococcus aureus [TaxId: 1280]
Probab=97.89 E-value=2.6e-05 Score=49.47 Aligned_cols=157 Identities=16% Similarity=0.233 Sum_probs=103.9
Q ss_pred CCCCCCCCCEEEECCCHHHHHHHHHH---CC-CCEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEEECCCCEEECC
Q ss_conf 41257899458803898899999964---99-967994567421454431565424984699644442255199199931
Q 000657 263 LNLSGFGGLKWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGA 338 (1370)
Q Consensus 263 ~~~~~~~~~~~~~P~sl~ell~ll~~---~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA 338 (1370)
..+++ .-..++.|+|.+|+.++++. +. ...+++|||.+.+.- ......+|++.. ++.++.+++.++.+|
T Consensus 29 ~~vGG-~a~~~v~p~s~~el~~~~~~a~~~~ip~~v~G~GSNll~~d---~~~~g~vi~l~~---~~~~~~~~~~v~~~a 101 (194)
T d1hska1 29 TKTGG-NADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIRE---GGIRGIVISLLS---LDHIEVSDDAIIAGS 101 (194)
T ss_dssp TSCCC-EEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECT---TCEEEEEEECTT---CCCEEEETTEEEEET
T ss_pred EEECE-EEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC---CCCEEEEEEEEC---CCCCCCCCCEEEEEE
T ss_conf 11282-98899951999999999987564365367860554223577---872239998202---222224697699983
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCC-CHHHHHHHCCCEEEEEECCC
Q ss_conf 4549999999998631289876422899999999842522234422233202-259998-73689875198999982799
Q 000657 339 AVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASPIS-DLNPLWMASGAKFHIVDCKG 416 (1370)
Q Consensus 339 ~vtl~~l~~~l~~~i~~~~~~~~~~~~aL~~~l~~iAs~qVRN~aTiGGNl~-~asp~s-D~~p~L~al~A~v~i~s~~g 416 (1370)
++.+.++...+.+.--. -+...++.. +||||+|. ||...+ ++.-.+. .+++...+|
T Consensus 102 G~~~~~l~~~~~~~gl~--------------g~e~~~gip----gtvGGai~mNaG~yG~ei~d~v~----~v~~v~~~G 159 (194)
T d1hska1 102 GAAIIDVSRVARDYALT--------------GLEFACGIP----GSIGGAVYMNAGAYGGEVKDCID----YALCVNEQG 159 (194)
T ss_dssp TSBHHHHHHHHHHTTEE--------------SCGGGTTCC----SBHHHHHHHTCEETTEEHHHHEE----EEEEECTTS
T ss_pred CCCHHHHHHHHHHHCCC--------------CCCCCCCCC----EEEHHHHHCCCCCCCCEEEEEEE----EEEEECCCC
T ss_conf 56317888999861034--------------332427766----33454555257416841788999----999994899
Q ss_pred CEEEEEHHHHHCCCCCCCCCC-CEEEEEEECCC
Q ss_conf 869984567620266666898-80899999458
Q 000657 417 NIRTTMAEEFFLGYRKVDLTS-GEILLSIFLPW 448 (1370)
Q Consensus 417 ~~r~ipl~dF~~g~~~~~L~~-~eii~~I~iP~ 448 (1370)
..++++-+|+.-+||.+.++. +.||++..+.+
T Consensus 160 ~i~~l~~~e~~f~YR~s~~~~~~~iIl~a~f~L 192 (194)
T d1hska1 160 SLIKLTTKELELDYRNSIIQKEHLVVLEAAFTL 192 (194)
T ss_dssp CEEEEETTTTTCBTTBCHHHHTTCEEEEEEEEC
T ss_pred CEEEEEHHHCCCCCCCCCCCCCCEEEEEEEEEE
T ss_conf 899987899263077787999999999999999
|
| >d1uxya1 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain domain: Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.56 E-value=0.00095 Score=38.78 Aligned_cols=159 Identities=16% Similarity=0.129 Sum_probs=97.7
Q ss_pred CCCCCCCCCCCEEEECCCHHHHHHHHHH---CC-CCEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEEE-CCCCEE
Q ss_conf 9841257899458803898899999964---99-967994567421454431565424984699644442255-199199
Q 000657 261 NPLNLSGFGGLKWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNV-KDDGLE 335 (1370)
Q Consensus 261 ~~~~~~~~~~~~~~~P~sl~ell~ll~~---~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~I~EL~~I~~-~~~~l~ 335 (1370)
.+..+++ .-..|+.|.|.+|+.++++. +. ...++.|||.+.+.-. ....++++..+- .+.+.. ++..++
T Consensus 7 ~t~~igG-~A~~~~~p~s~edl~~~l~~~~~~~~p~~vlG~GSNlL~~d~---~~~~vi~~~~~~--~~~~~~~~~~~v~ 80 (198)
T d1uxya1 7 NTFGIDH-NAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED---YRGTVIINRIKG--IEIHDEPDAWYLH 80 (198)
T ss_dssp STTCCCC-BEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC---EEEEEEEECCCC--EEEEECSSEEEEE
T ss_pred CCCCCCE-EEEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC---CCCCCCCCCCCC--CEEEECCCCEEEE
T ss_conf 3377691-863999979999999999988876998899951566322232---347531002331--0023035404999
Q ss_pred ECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCC----CCCHHHHHHHCCCEEE
Q ss_conf 9314549999999998631289876422899999999842522234422233202-2599----9873689875198999
Q 000657 336 IGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNIC-TASP----ISDLNPLWMASGAKFH 410 (1370)
Q Consensus 336 IGA~vtl~~l~~~l~~~i~~~~~~~~~~~~aL~~~l~~iAs~qVRN~aTiGGNl~-~asp----~sD~~p~L~al~A~v~ 410 (1370)
+||++++.++...+.+. .+. -++..+ .--||+||.+. ||.. ++|.. -.|+
T Consensus 81 vgAG~~~~~l~~~~~~~--gl~------------G~E~l~----gIPGtvGGai~mNaG~~g~ei~~~l-------~~V~ 135 (198)
T d1uxya1 81 VGAGENWHRLVKYTLQE--GMP------------GLENLA----LIPGCVGSSPIQNIGAYGVELQRVC-------AYVD 135 (198)
T ss_dssp EETTSBHHHHHHHHHHT--TCC------------SCGGGT----TCCSBGGGTTTTTCEETTEEGGGTE-------EEEE
T ss_pred EECCCCHHHHHHHHHHC--CCC------------CCHHHC----CCCCCCCHHHHHCCCCCCCCHHHCE-------EEEE
T ss_conf 80365458999999983--885------------303214----2644312455534400146512202-------4467
Q ss_pred EEE-CCCCEEEEEHHHHHCCCCCCCCCC----CEEEEEEECCCCC
Q ss_conf 982-799869984567620266666898----8089999945899
Q 000657 411 IVD-CKGNIRTTMAEEFFLGYRKVDLTS----GEILLSIFLPWTR 450 (1370)
Q Consensus 411 i~s-~~g~~r~ipl~dF~~g~~~~~L~~----~eii~~I~iP~~~ 450 (1370)
+.. .+|..+++.-+|+.-+||.+.++. .-||+++.+.+..
T Consensus 136 ~v~~~~G~~~~~~~~e~~f~YR~S~f~~~~~~~~iIl~a~f~L~~ 180 (198)
T d1uxya1 136 SVELATGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPK 180 (198)
T ss_dssp EEETTTTEEEEEETGGGTCBTTBCGGGTTTTTTEEEEEEEEEEES
T ss_pred EEECCCCCEEEEECCCCCEECCCCCCCCCCCCCEEEEEEEEEECC
T ss_conf 774379968997155562354552035667898899999999789
|
| >d3c8ya2 d.15.4.2 (A:1-126) Fe-only hydrogenase, N-terminal domain {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Fe-only hydrogenase, N-terminal domain species: Clostridium pasteurianum [TaxId: 1501]
Probab=97.44 E-value=0.00046 Score=40.90 Aligned_cols=67 Identities=27% Similarity=0.391 Sum_probs=51.8
Q ss_pred EEEEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCC------C-CCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHH
Q ss_conf 89999989899903689997378998517997555477------8-8888711999813235677102503123330011
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGC------G-EGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLY 92 (1370)
Q Consensus 20 ~i~f~lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC------~-~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~ 92 (1370)
+++++|||+.+++ .+++++|+.++..|+.=.. -| . -|.|..|.|-+++. ..+.||.+|+.
T Consensus 1 Mvti~IdG~~v~~---~~G~til~aa~~~gi~IP~-lC~~~~l~~~~G~Cr~C~Vev~G~---------~~v~AC~t~v~ 67 (126)
T d3c8ya2 1 MKTIIINGVQFNT---DEDTTILKFARDNNIDISA-LCFLNNCNNDINKCEICTVEVEGT---------GLVTACDTLIE 67 (126)
T ss_dssp CEEEEETTEEEEE---CCCCBHHHHHHHTTCCCCC-SSCBTTBCCSSSCCCTTEEEETTT---------EEEEGGGCBCC
T ss_pred CCEEEECCEEEEE---CCCCHHHHHHHHCCCCCCH-HHHCCCCCCCCCCCEEEEEEECCC---------CCCCCCCCCCC
T ss_conf 9389999999995---7989199999985996653-230567778875501699997167---------65663654779
Q ss_pred CCCCCEEEE
Q ss_conf 138957977
Q 000657 93 SLEGMHVIT 101 (1370)
Q Consensus 93 ~~~g~~i~T 101 (1370)
+|+.|.|
T Consensus 68 --~GM~V~T 74 (126)
T d3c8ya2 68 --DGMIINT 74 (126)
T ss_dssp --TTCEEES
T ss_pred --CCCEEEE
T ss_conf --9988996
|
| >d1nekb2 d.15.4.2 (B:1-106) Succinate dehydogenase iron-sulfur protein, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Succinate dehydogenase iron-sulfur protein, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.15 E-value=0.00058 Score=40.22 Aligned_cols=67 Identities=21% Similarity=0.307 Sum_probs=50.6
Q ss_pred EEEECCCCC--CCCHHHHHH---HC-CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCHHCC-CCCEEEE
Q ss_conf 999036899--973789985---17-9975554778888871199981323567710250312333001113-8957977
Q 000657 29 RKVLPDGLA--HLTLLEYLR---DI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL-EGMHVIT 101 (1370)
Q Consensus 29 ~~~~~~~~~--~~~l~~~LR---~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~p~~~~-~g~~i~T 101 (1370)
.+.++ +++ ++++|+.|. ++ +--+-+.+|.+|.||+|.+.+|| ++..+|.+++..+ +....+|
T Consensus 22 ~y~v~-~~~~~~~~vl~~L~~i~e~D~sLsfr~sCr~giCGsCam~ING----------~~~LAC~t~v~~~~~~~~~i~ 90 (106)
T d1nekb2 22 DYTLE-ADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNG----------KNGLACITPISALNQPGKKIV 90 (106)
T ss_dssp EEECC-CCSSSCCBHHHHHHHHHHHCTTCCCCCCSSSSCSCTTEEEETT----------EEEETTSCBTTTTCCTTSCEE
T ss_pred EEEEE-ECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEECC----------CCCCCHHEEHHHHHCCCCEEE
T ss_conf 99992-1377428799999998641987799737777899765699868----------635301006467507999699
Q ss_pred ECCCC
Q ss_conf 52656
Q 000657 102 VEGVG 106 (1370)
Q Consensus 102 ~Eg~~ 106 (1370)
||=|.
T Consensus 91 IePL~ 95 (106)
T d1nekb2 91 IRPLP 95 (106)
T ss_dssp EECCS
T ss_pred EEECC
T ss_conf 98799
|
| >d2fug33 d.15.4.2 (3:1-95) Nadh-quinone oxidoreductase chain 3, Nqo3, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Nadh-quinone oxidoreductase chain 3, Nqo3, N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.06 E-value=0.00063 Score=39.98 Aligned_cols=76 Identities=20% Similarity=0.244 Sum_probs=51.2
Q ss_pred EEEEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCC------CCCCCCEEEEECCCCCC-------------CCCCC
Q ss_conf 899999898999036899973789985179975554778------88887119998132356-------------77102
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG------EGGCGACTVMVSRYDKK-------------SKKCV 80 (1370)
Q Consensus 20 ~i~f~lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~------~G~CGaCtV~~~~~~~~-------------~~~~~ 80 (1370)
++.|++||+.++ ++++++||+.+++.|+. +...|+ .|.||.|-|-+..-... .....
T Consensus 1 Mv~i~i~g~~~~---v~~g~tll~a~~~~gi~-ip~~C~~~~~~~~G~C~~C~V~v~~g~~~~~~~~~~~~~~~~~~~~~ 76 (95)
T d2fug33 1 MVRVKVNDRIVE---VPPGTSVMDAVFHAGYD-VPLFCSEKHLSPIGACRMCLVRIGLPKKGPDGKPLLNEKGEPEIQWQ 76 (95)
T ss_dssp CEEEECSSCEEE---ECTTCBHHHHHHHHTCC-CCCCSCCTTSCCCSCSTTSEEEEEC------------------CCBC
T ss_pred CCEEEECCEEEE---ECCCCCHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 968999999999---78999399999860787-77533577767666347778998547646676540346666676328
Q ss_pred CEEECCCCCCHHCCCCCEEEE
Q ss_conf 503123330011138957977
Q 000657 81 HCAVNACLAPLYSLEGMHVIT 101 (1370)
Q Consensus 81 ~~~v~sCl~p~~~~~g~~i~T 101 (1370)
...+.||.+++. +|..|.|
T Consensus 77 ~~~rlaCqt~v~--~gm~V~T 95 (95)
T d2fug33 77 PKLAASCVTAVA--DGMVVDT 95 (95)
T ss_dssp SSCEETTTCBCC--TTCEEES
T ss_pred CCCCCCCCCCCC--CCCEEEC
T ss_conf 994073768989--9979969
|
| >d1iuea_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.84 E-value=0.0013 Score=37.81 Aligned_cols=50 Identities=16% Similarity=0.260 Sum_probs=42.8
Q ss_pred EEEEEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 0899999898999036899973789985179975554778888871199981
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 19 ~~i~f~lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
-+|+|..++..++++ ++++++||+.+++.|+. ...+|..|.||.|.+-+-
T Consensus 3 ~~VT~~~~~~~~~~~-~~~getlLda~~~~gi~-i~~~C~~G~CgtC~~~v~ 52 (98)
T d1iuea_ 3 YNITLRTNDGEKKIE-CNEDEYILDASERQNVE-LPYSCRGGSCSTCAAKLV 52 (98)
T ss_dssp EEEEEEETTEEEEEE-EETTSCHHHHHHHTTCC-CCCSSCSSSSSTTEEEEE
T ss_pred EEEEEEECCCEEEEE-ECCCCCHHHHHHHCCCC-EEECCCCEECCCCEEEEE
T ss_conf 999999489729999-79898299999886997-687378537588788873
|
| >d1awda_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Chlorella fusca [TaxId: 3073]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Chlorella fusca [TaxId: 3073]
Probab=96.82 E-value=0.0021 Score=36.37 Aligned_cols=50 Identities=18% Similarity=0.357 Sum_probs=42.6
Q ss_pred EEEEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 8999998989990368999737899851799755547788888711999813
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 20 ~i~f~lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1370)
+|+|..++...+++ ++++++||+.+++.|+. ...+|+.|.||.|.+.+-.
T Consensus 2 kVTl~~~~~~~~~~-~~~~~slL~aa~~~Gi~-i~~~C~~G~CgtC~~~v~~ 51 (94)
T d1awda_ 2 KVTLKTPSGEETIE-CPEDTYILDAAEEAGLD-LPYSCRAGACSSCAGKVES 51 (94)
T ss_dssp EEEEEETTEEEEEE-CCTTSCHHHHHHHTTCC-CCCSSSSSSSSTTEEEEEE
T ss_pred EEEEEECCCCEEEE-ECCCCCHHHHHHHCCCC-EEEECCCCCCCCCEEEEEE
T ss_conf 89999189858999-49998499999886996-7985498734784589861
|
| >d1frra_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Equisetum arvense [TaxId: 3258]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Equisetum arvense [TaxId: 3258]
Probab=96.80 E-value=0.0019 Score=36.78 Aligned_cols=49 Identities=20% Similarity=0.345 Sum_probs=42.4
Q ss_pred EEEEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 899999898999036899973789985179975554778888871199981
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 20 ~i~f~lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
+|+|..++..++++ ++++++||+.+++.|+. ...+|+.|.||.|.+.+-
T Consensus 3 kVt~~~~~~~~~~~-~~~g~slLda~~~~Gi~-ip~~C~~G~CgtC~~~v~ 51 (95)
T d1frra_ 3 KTVLKTPSGEFTLD-VPEGTTILDAAEEAGYD-LPFSCRAGACSSCLGKVV 51 (95)
T ss_dssp EEEEEETTEEEEEE-ECTTCCHHHHHHHTTCC-CCCSSSSSSSSTTEEEEE
T ss_pred EEEEECCCCCEEEE-ECCCCCHHHHHHHCCCC-EEECCCCCEECCCEEEEE
T ss_conf 99998799839999-79798399999886998-886058958478888976
|
| >d1l5pa_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Trichomonas vaginalis [TaxId: 5722]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Trichomonas vaginalis [TaxId: 5722]
Probab=96.49 E-value=0.0044 Score=34.21 Aligned_cols=51 Identities=24% Similarity=0.366 Sum_probs=45.2
Q ss_pred EEEEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCC-CCCCCCEEEEECC
Q ss_conf 899999898999036899973789985179975554778-8888711999813
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVSR 71 (1370)
Q Consensus 20 ~i~f~lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~~ 71 (1370)
+++++.+|+++.++ +.++++|++.|++.|+.+.-..|+ .|.||.|-|.+..
T Consensus 2 tvtv~~~G~~~~i~-~~~G~tLl~al~~~gi~~i~~~CgG~~~C~tC~v~v~~ 53 (93)
T d1l5pa_ 2 TITAVKGGVKKQLK-FEDDQTLFTVLTEAGLMSADDTCQGNKACGKCICKHVS 53 (93)
T ss_dssp EEEEEETTEEEEEE-CCTTEEHHHHHHTTTSSCCTTSCSSSSSSCCCEEEEEE
T ss_pred EEEEEECCEEEEEE-ECCCCHHHHHHHHHCCCCCCCCCCCCCEECCCEEEECC
T ss_conf 69999899599999-68986099999870887766543578785752899858
|
| >d1a70a_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=96.47 E-value=0.0034 Score=35.00 Aligned_cols=50 Identities=14% Similarity=0.292 Sum_probs=41.3
Q ss_pred EEEEEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 0899999898999036899973789985179975554778888871199981
Q 000657 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 19 ~~i~f~lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
-+|+|..++..++++ ++++++||+.+++.|+. ...+|+.|.||.|.|.+-
T Consensus 3 fkVtv~~~~g~~~~~-~~~g~tlL~a~~~~Gi~-i~~~C~~G~CgtC~~~v~ 52 (97)
T d1a70a_ 3 YKVTLVTPTGNVEFQ-CPDDVYILDAAEEEGID-LPYSCRAGSCSSCAGKLK 52 (97)
T ss_dssp EEEEEEETTEEEEEE-EETTSCHHHHHHHTTCC-CCCSSSSSCSSTTEEEEE
T ss_pred EEEEEEECCCCEEEE-ECCCCHHHHHHHHCCCC-EEECCCCEECCCCEEEEE
T ss_conf 899999189878999-69796099999886998-023799388389983830
|
| >d1czpa_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Cyanobacterium (Anabaena sp.), pcc 7119 and 7120 [TaxId: 1167]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Cyanobacterium (Anabaena sp.), pcc 7119 and 7120 [TaxId: 1167]
Probab=96.22 E-value=0.0022 Score=36.32 Aligned_cols=53 Identities=15% Similarity=0.324 Sum_probs=42.6
Q ss_pred CCEEEEEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 5308999998989990368999737899851799755547788888711999813
Q 000657 17 WTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 17 ~~~~i~f~lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1370)
|+.++.+..+|+..+++ ++++++||+.+++.|+. ...+|+.|.||.|.+.+-.
T Consensus 3 ~~Vtl~~~~~g~~~~~~-v~~~~slL~a~~~~Gi~-ip~~C~~G~CgtC~~~v~~ 55 (98)
T d1czpa_ 3 FKVTLINEAEGTKHEIE-VPDDEYILDAAEEQGYD-LPFSCRAGACSTCAGKLVS 55 (98)
T ss_dssp EEEEEEETTTTEEEEEE-EETTSCHHHHHHHTTCC-CCCSSSSSSSSTTEEEEEE
T ss_pred EEEEEEECCCCCEEEEE-ECCCCHHHHHHHHCCCC-EEEECCCCCCCCCEEEEEC
T ss_conf 99999885899889999-49697199999885998-5874487164879668732
|
| >d2piaa3 d.15.4.2 (A:224-321) Phthalate dioxygenase reductase, C-terminal domain {Pseudomonas cepacia, db01 [TaxId: 292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Phthalate dioxygenase reductase, C-terminal domain species: Pseudomonas cepacia, db01 [TaxId: 292]
Probab=96.19 E-value=0.0043 Score=34.26 Aligned_cols=49 Identities=27% Similarity=0.419 Sum_probs=39.4
Q ss_pred CEEEEEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 30899999898999036899973789985179975554778888871199981
Q 000657 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 18 ~~~i~f~lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
.-+++|.-+|+.+. ++++++||+.+++.|+. +..+|..|.||.|.|-+-
T Consensus 14 ~~~V~l~~~g~~~~---v~~~~slL~aa~~~Gi~-ip~~C~~G~CgtC~~~v~ 62 (98)
T d2piaa3 14 PFTVRLSRSGTSFE---IPANRSILEVLRDANVR-VPSSCESGTCGSCKTALC 62 (98)
T ss_dssp CEEEEETTTCCEEE---ECTTSCHHHHHHHTTCC-CCCSCSSSSSCTTEEEEE
T ss_pred CEEEEEECCCEEEE---ECCCCCHHHHHHHCCCC-CCCCCCCCEECCCEEEEE
T ss_conf 98999927997999---89297299999863983-531388617189878999
|
| >d1wria_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Equisetum arvense [TaxId: 3258]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Equisetum arvense [TaxId: 3258]
Probab=96.17 E-value=0.0067 Score=32.97 Aligned_cols=49 Identities=14% Similarity=0.216 Sum_probs=39.4
Q ss_pred EEEEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 8999998989990368999737899851799755547788888711999813
Q 000657 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 20 ~i~f~lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1370)
+|+|...+..+.++ ++++++||+.+|+.+ ....+|..|.||.|.+.+..
T Consensus 3 ~Vt~~~~~~~~~~~-~~~~~~lLdaa~~~~--~lp~~Cr~G~CgtC~~~v~~ 51 (93)
T d1wria_ 3 KVTLKTPDGDITFD-VEPGERLIDIGSEKA--DLPLSCQAGACSTCLGKIVS 51 (93)
T ss_dssp EEEEEETTEEEEEE-ECTTSCHHHHHHHHS--CCCCSSSSSSSSTTEEEEEE
T ss_pred EEEEECCCCCEEEE-ECCCCCHHHHHHHCC--CEEEEECCCCCCCCEEEEEC
T ss_conf 99998389819999-598973999997489--87878288356758827240
|
| >d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: FAD-linked oxidases, N-terminal domain domain: D-lactate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.12 E-value=0.012 Score=31.28 Aligned_cols=107 Identities=22% Similarity=0.111 Sum_probs=69.6
Q ss_pred CCEEEECCCHHHHHHHHHHC---CC-CEEEECCCCCEEEE-EEC--CCCCCEEEECCCCCCCCCEEECCCCEEECCCCCH
Q ss_conf 94588038988999999649---99-67994567421454-431--5654249846996444422551991999314549
Q 000657 270 GLKWYRPLKLQHLLELKSKY---PD-SKLLVGNTEVGIEM-RLK--RMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRL 342 (1370)
Q Consensus 270 ~~~~~~P~sl~ell~ll~~~---~~-a~lvaGgTdl~v~~-k~~--~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vtl 342 (1370)
-....+|+|.+|..++++.. .- ...-+|||++.-.. -.+ ....-+++|+++......+ .+++.+.+.+++++
T Consensus 38 p~aVV~P~s~~eV~~iv~~a~~~~~pv~~rGgGTsl~Gg~~p~~g~~~~~~vv~~~~~m~~i~~~-~~~~~v~v~pGv~~ 116 (265)
T d1f0xa2 38 ALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVL-GKGEQVLAYPGTTL 116 (265)
T ss_dssp CSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEE-TTTTEEEECTTCBH
T ss_pred CCEEEECCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEC-CCCCCEEEEEEEEH
T ss_conf 77899589899999999999850466540226633104535664345654135654565652203-55453699851418
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 999999998631289876422899999999842522234422233202259
Q 000657 343 TELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 393 (1370)
Q Consensus 343 ~~l~~~l~~~i~~~~~~~~~~~~aL~~~l~~iAs~qVRN~aTiGGNl~~as 393 (1370)
.+|.+.|+++-..++ +..+.-.+.+||||+|++.+
T Consensus 117 ~~L~~~l~~~g~~~~----------------~~~~~s~~~atiGG~ia~na 151 (265)
T d1f0xa2 117 YSLEKALKPLGREPH----------------SVIGSSCIGASVIGGICNNS 151 (265)
T ss_dssp HHHHHHHGGGTEECS----------------CCCGGGGGTCBHHHHHHTTC
T ss_pred HHHHHHHHHCCCCCC----------------CCCCCCCCCCEEEEEHHHCC
T ss_conf 999998886699334----------------68885110623113454389
|
| >d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: FAD-linked oxidases, N-terminal domain domain: Cytokinin dehydrogenase 1 species: Maize (Zea mays) [TaxId: 4577]
Probab=95.90 E-value=0.031 Score=28.43 Aligned_cols=104 Identities=12% Similarity=0.021 Sum_probs=68.5
Q ss_pred CCEEEECCCHHHHHHHHH---HCC--C--CEEEECCCCCEEEEEECCCCCCEEEECCCCCCCC-----CEEECCCCEEEC
Q ss_conf 945880389889999996---499--9--6799456742145443156542498469964444-----225519919993
Q 000657 270 GLKWYRPLKLQHLLELKS---KYP--D--SKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELN-----VLNVKDDGLEIG 337 (1370)
Q Consensus 270 ~~~~~~P~sl~ell~ll~---~~~--~--a~lvaGgTdl~v~~k~~~~~~~~lIdl~~I~EL~-----~I~~~~~~l~IG 337 (1370)
-...++|+|.+|+.++++ ++. . .+..+||++..-. ......++||+++..... .+..+...+++|
T Consensus 30 P~~Vv~P~s~~ev~~iv~~a~~~~~~~~~v~~rggGhs~~g~---s~~~~~ividl~~l~~i~~~~~~~id~~~~~v~v~ 106 (206)
T d1w1oa2 30 PAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQ---AFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAG 106 (206)
T ss_dssp CSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSST---TCCTTSEEEEGGGGGCSSSSCSEEECTTSSEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC---CCCCCCEEEECCCCCEEEECEEEEEECCCCEEEEE
T ss_conf 999997698999999999998578998479998999784657---40479773310234323202147883489789997
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 145499999999986312898764228999999998425222344222332022599
Q 000657 338 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP 394 (1370)
Q Consensus 338 A~vtl~~l~~~l~~~i~~~~~~~~~~~~aL~~~l~~iAs~qVRN~aTiGGNl~~asp 394 (1370)
+++++.++.+.+++.-- ......--+.+|+||++++...
T Consensus 107 aG~~~~~l~~~l~~~Gl------------------~~~~~~~~~~~tvGG~i~~~g~ 145 (206)
T d1w1oa2 107 GEQVWIDVLRASLARGV------------------APRSWTDYLYLTVGGTLSNAGI 145 (206)
T ss_dssp TTCBHHHHHHHHHTTTE------------------EESCCCSSCCSBHHHHHTTCCC
T ss_pred CCEEHHHHHHHHHCCCC------------------CCCCCCCCCCEEEEEEECCCCC
T ss_conf 13462443323321332------------------2445785683477643102341
|
| >d1jq4a_ d.15.4.2 (A:) Methane monooxygenase reductase N-terminal domain {Methylococcus capsulatus [TaxId: 414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Methane monooxygenase reductase N-terminal domain species: Methylococcus capsulatus [TaxId: 414]
Probab=95.88 E-value=0.0023 Score=36.10 Aligned_cols=46 Identities=17% Similarity=0.332 Sum_probs=40.6
Q ss_pred EEECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 999898999036899973789985179975554778888871199981
Q 000657 23 LYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1370)
Q Consensus 23 f~lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1370)
++.+|+.++++ ++++++||+.+++.|+. ...+|+.|.||.|.+.+-
T Consensus 10 i~~dG~~~~~~-~~~g~slLdaa~~~Gi~-i~~~C~~G~Cg~C~~~v~ 55 (98)
T d1jq4a_ 10 VTEDGESLRFE-CRSDEDVITAALRQNIF-LMSSCREGGCATCKALCS 55 (98)
T ss_dssp EETTTEEEEEE-EESCCTHHHHHHHHTCC-CCCSCCSSCCCCCCBCEE
T ss_pred EECCCCEEEEE-ECCCCHHHHHHHHCCCC-EEECCCCCEECCCEEEEE
T ss_conf 97499999999-69796499999886998-178578860089639999
|
| >d1krha3 d.15.4.2 (A:2-105) Benzoate dioxygenase reductase, N-terminal domain {Acinetobacter sp. [TaxId: 472]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin domains from multidomain proteins domain: Benzoate dioxygenase reductase, N-terminal domain species: Acinetobacter sp. [TaxId: 472]
Probab=95.76 E-value=0.0059 Score=33.36 Aligned_cols=50 Identities=20% Similarity=0.411 Sum_probs=40.1
Q ss_pred EEEEEE-CCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 899999-8989990368999737899851799755547788888711999813
Q 000657 20 EAILYV-NGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 20 ~i~f~l-Ng~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1370)
+|+|.. +|+...++ ++++++||+.+++.|+. .-.+|+.|.||.|.|.|..
T Consensus 4 kVt~~f~dg~~~~~~-~~~getlL~aa~~~gi~-i~~~C~~G~CgtC~v~v~~ 54 (104)
T d1krha3 4 QVALQFEDGVTRFIC-IAQGETLSDAAYRQQIN-IPMDCREGECGTCRAFCES 54 (104)
T ss_dssp EEEEECTTSCEEEEE-ECTTCCHHHHHHHTTCC-CSCSCSSSSSCTTEEEEEE
T ss_pred EEEEEECCCCEEEEE-ECCCCCHHHHHHHCCCC-CCCCCCCCCCCCCEEEEEE
T ss_conf 899993899999998-39899199999985999-7600388135789888450
|
| >d1e9ma_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Rhodobacter capsulatus, ferredoxin VI [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Rhodobacter capsulatus, ferredoxin VI [TaxId: 1061]
Probab=95.74 E-value=0.01 Score=31.70 Aligned_cols=80 Identities=29% Similarity=0.494 Sum_probs=55.4
Q ss_pred EEEEE-ECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCC-CCCCCCEEEEECC-C-CCCC--------------CCCCC
Q ss_conf 89999-9898999036899973789985179975554778-8888711999813-2-3567--------------71025
Q 000657 20 EAILY-VNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVSR-Y-DKKS--------------KKCVH 81 (1370)
Q Consensus 20 ~i~f~-lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~~-~-~~~~--------------~~~~~ 81 (1370)
+|+|. -||++++++ +.++++|++.|++.|+.+.-..|+ .|.||.|-|.+.. | +... +....
T Consensus 2 KIt~i~~dG~~~~i~-~~~G~tLl~a~~~~gi~~i~~~CgG~g~C~tC~V~i~~g~~~~l~~~~~~E~~~L~~~~~~~~~ 80 (106)
T d1e9ma_ 2 KIIFIEHNGTRHEVE-AKPGLTVMEAARDNGVPGIDADCGGACACSTCHAYVDPAWVDKLPKALPTETDMIDFAYEPNPA 80 (106)
T ss_dssp EEEEECTTSCEEEEE-CCTTSBHHHHHHTTTCTTCCCTTSSSSSSCTTEEEECHHHHTTSCCCCHHHHHHHTTSSSCCTT
T ss_pred EEEEECCCCCEEEEE-ECCCCHHHHHHHHCCCCCCCCCCCCCCEECCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf 899988999899999-7999859999987388786730144756333689962685344898977788777513244779
Q ss_pred EEECCCCCCHHC-CCCCEEE
Q ss_conf 031233300111-3895797
Q 000657 82 CAVNACLAPLYS-LEGMHVI 100 (1370)
Q Consensus 82 ~~v~sCl~p~~~-~~g~~i~ 100 (1370)
....||-+.+.. ++|..|.
T Consensus 81 ~sRLaCQ~~v~~d~~gl~V~ 100 (106)
T d1e9ma_ 81 TSRLTCQIKVTSLLDGLVVH 100 (106)
T ss_dssp TEEEGGGCBCCGGGTTEEEE
T ss_pred CEEEEEECEECCCCCCEEEE
T ss_conf 64865728934656987997
|
| >d1xlqa1 d.15.4.1 (A:1-106) 2Fe-2S ferredoxin {Pseudomonas putida, putidaredoxin [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Pseudomonas putida, putidaredoxin [TaxId: 303]
Probab=95.45 E-value=0.019 Score=29.92 Aligned_cols=51 Identities=22% Similarity=0.448 Sum_probs=43.5
Q ss_pred EEEEEE-CCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCC-CCCCCCEEEEECC
Q ss_conf 899999-898999036899973789985179975554778-8888711999813
Q 000657 20 EAILYV-NGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVSR 71 (1370)
Q Consensus 20 ~i~f~l-Ng~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~~ 71 (1370)
+|+|.- ||+.++++ ++++++|++.+++.|+.+.-.-|+ .|.||.|-|.+..
T Consensus 2 KIt~i~~dG~~~~i~-~~~G~tLl~aa~~~gi~~i~~~CgG~~~C~tC~V~v~~ 54 (106)
T d1xlqa1 2 KVVYVSHDGTRRELD-VADGVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNE 54 (106)
T ss_dssp EEEEECTTSCEEEEE-CCTTCBHHHHHHHTTCTTSCCTTCSSSSSCTTEEEECT
T ss_pred EEEEECCCCCEEEEE-ECCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEECC
T ss_conf 799988999889999-69997199999870867754356306502231678446
|
| >d1frda_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Cyanobacterium (Anabaena sp.), pcc 7119 and 7120 [TaxId: 1167]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Cyanobacterium (Anabaena sp.), pcc 7119 and 7120 [TaxId: 1167]
Probab=94.90 E-value=0.013 Score=30.99 Aligned_cols=50 Identities=18% Similarity=0.359 Sum_probs=39.5
Q ss_pred EEEEEE--CCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 899999--8989990368999737899851799755547788888711999813
Q 000657 20 EAILYV--NGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 20 ~i~f~l--Ng~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1370)
+++|.- +|..++++ ++++++||+.+++.|+. ...+|+.|.||.|.+.+-.
T Consensus 4 ~Vt~~~~~~~~~~ti~-v~~g~siLdaa~~~Gi~-i~~~C~~G~CgtC~~~v~~ 55 (98)
T d1frda_ 4 QVRLINKKQDIDTTIE-IDEETTILDGAEENGIE-LPFSCHSGSCSSCVGKVVE 55 (98)
T ss_dssp EEEEEETTTTEEEEEE-EETTSCHHHHHHHTTCC-CCCSSSSSSSSTTEEEEEE
T ss_pred EEEEEECCCCCEEEEE-ECCCCHHHHHHHHCCCC-EEEECCCCEECCCEEEECC
T ss_conf 9999847999639999-59797099999886998-7870699702778988136
|
| >d1b9ra_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Pseudomonas sp., terpredoxin [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Pseudomonas sp., terpredoxin [TaxId: 306]
Probab=94.83 E-value=0.0069 Score=32.86 Aligned_cols=51 Identities=16% Similarity=0.355 Sum_probs=42.2
Q ss_pred EEEEE-ECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCC-CCCCCCCEEEEECC
Q ss_conf 89999-989899903689997378998517997555477-88888711999813
Q 000657 20 EAILY-VNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGC-GEGGCGACTVMVSR 71 (1370)
Q Consensus 20 ~i~f~-lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC-~~G~CGaCtV~~~~ 71 (1370)
+|+|. -+|++++++ +.++++|++.+++.++.+.-.-| |.|.||.|-|.+..
T Consensus 2 kvt~i~~dG~~~~v~-~~~G~tLl~aa~~~gi~~i~~~CgG~g~C~tC~V~v~~ 54 (105)
T d1b9ra_ 2 RVVFIDEQSGEYAVD-AQDGQSLMEVATQNGVPGIVAECGGSCVCATCRIEIED 54 (105)
T ss_dssp EEEECCTTTSCEEEE-CCTTCCTTHHHHHHTCCCCCCSSTTSSCCCCCCCEECT
T ss_pred EEEEECCCCCEEEEE-ECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECC
T ss_conf 799995899889999-79999099999875987756546887451551788234
|
| >d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: FAD-linked oxidases, N-terminal domain domain: Flavoprotein subunit of p-cresol methylhydroxylase species: Pseudomonas putida [TaxId: 303]
Probab=94.72 E-value=0.048 Score=27.11 Aligned_cols=81 Identities=5% Similarity=0.012 Sum_probs=57.3
Q ss_pred CEEEECCCHHHHHHHHHH---CC-CCEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEEECCCCEEECCCCCHHHHH
Q ss_conf 458803898899999964---99-96799456742145443156542498469964444225519919993145499999
Q 000657 271 LKWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 346 (1370)
Q Consensus 271 ~~~~~P~sl~ell~ll~~---~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vtl~~l~ 346 (1370)
...++|+|.+|+.++++. +. ..++.+||+++...--.......++||+++......|..++..+++++++++.++.
T Consensus 53 ~~Vv~P~s~eeV~~iv~~a~~~~~~i~~~g~G~s~~~g~~~~~~~~~ividl~~mn~i~~id~~~~~v~v~aG~~~~~l~ 132 (236)
T d1wvfa2 53 SAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQMY 132 (236)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCEEHHHHHHHHHHH
T ss_conf 88995699999999999987179411002344443211123555148986011022101210333101011344433257
Q ss_pred HHHHH
Q ss_conf 99998
Q 000657 347 KMFRK 351 (1370)
Q Consensus 347 ~~l~~ 351 (1370)
+.|.+
T Consensus 133 ~~l~~ 137 (236)
T d1wvfa2 133 DYIQE 137 (236)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 88764
|
| >d1i7ha_ d.15.4.1 (A:) Adrenodoxin-like ferredoxin {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: Adrenodoxin-like ferredoxin species: Escherichia coli [TaxId: 562]
Probab=93.20 E-value=0.081 Score=25.56 Aligned_cols=44 Identities=18% Similarity=0.300 Sum_probs=34.7
Q ss_pred ECCEEEEECCCCCCCCHHHHHHHCCCCCCCCCC-CCCCCCCEEEEECCC
Q ss_conf 989899903689997378998517997555477-888887119998132
Q 000657 25 VNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGC-GEGGCGACTVMVSRY 72 (1370)
Q Consensus 25 lNg~~~~~~~~~~~~~l~~~LR~~~l~g~k~gC-~~G~CGaCtV~~~~~ 72 (1370)
-+|+.++ +.++++|++.+++.|+. .-..| +.|.||.|-|.+...
T Consensus 13 p~g~~v~---~~~G~tLl~aa~~~gi~-i~~~CgG~g~CgtC~v~v~~G 57 (109)
T d1i7ha_ 13 PDGAVLE---ANSGETILDAALRNGIE-IEHACEKSCACTTCHCIVREG 57 (109)
T ss_dssp TTCEEEE---CCTTCBHHHHHHHTTCC-CCCTTSSSSCCSTTEEEEEEC
T ss_pred CCCCEEE---ECCCCCHHHHHHHCCCC-CCCCCCCCCEECCEEEEEECC
T ss_conf 9985899---58998199999986999-876889966368708886357
|
| >d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: FAD-linked oxidases, N-terminal domain domain: Cholesterol oxidase species: Brevibacterium sterolicum [TaxId: 1702]
Probab=92.63 E-value=0.18 Score=23.19 Aligned_cols=107 Identities=13% Similarity=0.049 Sum_probs=63.2
Q ss_pred CEEEECCCHHHHHHHHHHC---C-CCEEEECCCCCEEEEEECC---CCCCEEEECCCCCCCC-CEEECCCCEEECCCCCH
Q ss_conf 4588038988999999649---9-9679945674214544315---6542498469964444-22551991999314549
Q 000657 271 LKWYRPLKLQHLLELKSKY---P-DSKLLVGNTEVGIEMRLKR---MQYQVLISVTHVPELN-VLNVKDDGLEIGAAVRL 342 (1370)
Q Consensus 271 ~~~~~P~sl~ell~ll~~~---~-~a~lvaGgTdl~v~~k~~~---~~~~~lIdl~~I~EL~-~I~~~~~~l~IGA~vtl 342 (1370)
...++|+|.+|+.++++.. . ..++.+||+++.-..--.. ...-.++++++..... .+..+...+++++++++
T Consensus 32 ~~v~~P~s~edV~~~V~~A~~~~~~v~~~G~Ghs~~g~~~~~~~~~~~~~~~~~l~~~~~i~~~~d~~~~~v~v~aG~~~ 111 (216)
T d2i0ka2 32 TWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGITVNTGGPVATVTAGAGASI 111 (216)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCEEEECCSSSCEEEEETTSBH
T ss_pred CEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECH
T ss_conf 98996798999999999998677159997175445698254135763379999555545664224666645789865212
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999863128987642289999999984252223442223320225999
Q 000657 343 TELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPI 395 (1370)
Q Consensus 343 ~~l~~~l~~~i~~~~~~~~~~~~aL~~~l~~iAs~qVRN~aTiGGNl~~asp~ 395 (1370)
.++.+.+.+.--. +....-..-.||||.+++....
T Consensus 112 ~~l~~~l~~~g~~------------------l~~~~~~~~~tigG~~~~~~~g 146 (216)
T d2i0ka2 112 EAIVTELQKHDLG------------------WANLPAPGVLSIGGALAVNAHG 146 (216)
T ss_dssp HHHHHHHHHTTEE------------------CSSCCSCTTCBHHHHHHTTCCC
T ss_pred HHHHHHHHHCCCC------------------CCCCCCHHHEEECCCCCCCCCC
T ss_conf 3544445414863------------------2367871223641566797157
|
| >d2bt6a1 d.15.4.1 (A:5-108) Adrenodoxin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: Adrenodoxin species: Cow (Bos taurus) [TaxId: 9913]
Probab=92.26 E-value=0.086 Score=25.37 Aligned_cols=80 Identities=18% Similarity=0.253 Sum_probs=49.6
Q ss_pred EEEEEE-ECCEEEEECCCCCCCCHHHHHHHCCCC-CCCCCC-CCCCCCCEEEEECC-C-CC---CC----------CCCC
Q ss_conf 089999-989899903689997378998517997-555477-88888711999813-2-35---67----------7102
Q 000657 19 KEAILY-VNGLRKVLPDGLAHLTLLEYLRDIGLT-GTKLGC-GEGGCGACTVMVSR-Y-DK---KS----------KKCV 80 (1370)
Q Consensus 19 ~~i~f~-lNg~~~~~~~~~~~~~l~~~LR~~~l~-g~k~gC-~~G~CGaCtV~~~~-~-~~---~~----------~~~~ 80 (1370)
..|+|. -+|+++.++ ++++++|++.+|+.++. ..-..| |.|.||.|-|.+.. | +. .+ ....
T Consensus 3 i~i~~i~~dG~~~~i~-~~~G~tLl~~~~~~gi~i~~~~~CgG~~~C~tC~V~v~~~~~~~l~~~~~~E~~~L~~~~~~~ 81 (104)
T d2bt6a1 3 ITVHFINRDGETLTTK-GKIGDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLT 81 (104)
T ss_dssp EEEEEECTTSCEEEEE-EETTCBHHHHHHHTTCCCTTTTTTSSSSSBSTTEEECCHHHHTTSCCCCHHHHHHHTTCTTCC
T ss_pred EEEEEECCCCCEEEEE-ECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCCCHHHHHHHHCCCCCC
T ss_conf 8999998999799999-599852999999859974525666871530168878625621005789878999754337899
Q ss_pred CEEECCCCCCHHC-CCCCEE
Q ss_conf 5031233300111-389579
Q 000657 81 HCAVNACLAPLYS-LEGMHV 99 (1370)
Q Consensus 81 ~~~v~sCl~p~~~-~~g~~i 99 (1370)
-..-.||.+.+.. ++|..|
T Consensus 82 ~~sRLaCQi~l~~~ldgl~V 101 (104)
T d2bt6a1 82 DRSRLGCQICLTKAMDNMTV 101 (104)
T ss_dssp TTEEEGGGCBCCGGGTTEEE
T ss_pred CCEEEEEECEEECCCCCEEE
T ss_conf 69588604886136898899
|
| >d1rm6a2 d.133.1.1 (A:134-769) 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain {Thauera aromatica [TaxId: 59405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain species: Thauera aromatica [TaxId: 59405]
Probab=92.24 E-value=0.21 Score=22.72 Aligned_cols=57 Identities=11% Similarity=0.195 Sum_probs=41.5
Q ss_pred CCEEEEEEECCCCEEEEEECCCCH-----HHHHHHHHHHHCCCCCCEEEEECC------CCCCCCCCCC
Q ss_conf 884799996589849999599882-----899999998819999728999365------5788999976
Q 000657 784 PHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTKR------IGGGFGGKET 841 (1370)
Q Consensus 784 p~~a~A~~~~~~g~l~V~sstQ~p-----~~vr~~vA~~Lgip~~kV~V~~~~------vGGgFGgK~~ 841 (1370)
+..+..... .||.++|+++.+.. ......+|+.||+|.++|+|...+ -+|.+|.+.+
T Consensus 326 ~a~a~v~l~-~dG~v~v~~g~~d~GqG~~T~~~QiaAe~LGi~~e~V~v~~~DT~~~p~~~gt~~Sr~t 393 (636)
T d1rm6a2 326 HATVNLKLD-FDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVT 393 (636)
T ss_dssp SEEEEEEEC-TTCCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCHH
T ss_pred CCCEEEEEE-CCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 631268990-69976885154465444431055646777396643232102466645477865566500
|
| >d1jrob2 d.133.1.1 (B:124-777) Xanthine dehydrogenase chain B, C-terminal domain {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Xanthine dehydrogenase chain B, C-terminal domain species: Rhodobacter capsulatus [TaxId: 1061]
Probab=92.22 E-value=0.21 Score=22.71 Aligned_cols=72 Identities=13% Similarity=0.046 Sum_probs=50.2
Q ss_pred CCCEEEEEEECCCCEEEEEECCCCH-----HHHHHHHHHHHCCCCCCEEEE------ECCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9884799996589849999599882-----899999998819999728999------36557889999761039999999
Q 000657 783 EPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCK------TKRIGGGFGGKETRSAFIAAAAA 851 (1370)
Q Consensus 783 Ep~~a~A~~~~~~g~l~V~sstQ~p-----~~vr~~vA~~Lgip~~kV~V~------~~~vGGgFGgK~~~~~~~a~~aA 851 (1370)
.+.++....+ .||.++|+++++.. ......+|+.||+|.++|+|. .+.-+|.+|.+.+.. ...++.
T Consensus 342 ~~~~a~v~l~-~DG~v~v~~g~~d~GQG~~T~~aQiaAe~LGi~~e~V~v~~~DT~~~p~~~gt~~Sr~t~~--~G~Av~ 418 (654)
T d1jrob2 342 NQAGALVQIY-TDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADM--NGMAVK 418 (654)
T ss_dssp CEEEEEEEEC-TTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHHHH--HHHHHH
T ss_pred CCCCEEEEEC-CCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCEE--CCHHHH
T ss_conf 7641599993-8998899838767898678889999999858962036999426888886654456544222--250233
Q ss_pred HHHHCC
Q ss_conf 999707
Q 000657 852 VPSFLL 857 (1370)
Q Consensus 852 laA~~~ 857 (1370)
.+|.++
T Consensus 419 ~Aa~~l 424 (654)
T d1jrob2 419 DACETL 424 (654)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 323222
|
| >d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: FAD-linked oxidases, N-terminal domain domain: Vanillyl-alcohol oxidase species: Fungus (Penicillium simplicissimum) [TaxId: 69488]
Probab=89.37 E-value=0.38 Score=20.96 Aligned_cols=82 Identities=10% Similarity=0.037 Sum_probs=52.1
Q ss_pred CEEEECCCHHHHHHHHHHC--CCC--EEEECCCCCEEEEEECCCCCCEEEECCC-CCCCCCEEECCCCEEECCCCCHHHH
Q ss_conf 4588038988999999649--996--7994567421454431565424984699-6444422551991999314549999
Q 000657 271 LKWYRPLKLQHLLELKSKY--PDS--KLLVGNTEVGIEMRLKRMQYQVLISVTH-VPELNVLNVKDDGLEIGAAVRLTEL 345 (1370)
Q Consensus 271 ~~~~~P~sl~ell~ll~~~--~~a--~lvaGgTdl~v~~k~~~~~~~~lIdl~~-I~EL~~I~~~~~~l~IGA~vtl~~l 345 (1370)
..-++|+|.+|..++++.. .+. ...++|+..+..-........++||+++ ......|..++..+++++++++.++
T Consensus 67 ~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~g~G~~~~~~~~~~~~~~~ividls~~mn~i~~id~~~~~~~v~aGv~~~~l 146 (268)
T d1e8ga2 67 SAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTYHDL 146 (268)
T ss_dssp SEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCBHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 88995798999999999999839987841564555653124446775043306653232111454301112033405888
Q ss_pred HHHHHHH
Q ss_conf 9999986
Q 000657 346 LKMFRKV 352 (1370)
Q Consensus 346 ~~~l~~~ 352 (1370)
.+.|.++
T Consensus 147 ~~~l~~~ 153 (268)
T d1e8ga2 147 HNYLEAN 153 (268)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
T ss_conf 8989877
|
| >d1vlba4 d.133.1.1 (A:311-907) Aldehyde oxidoreductase {Desulfovibrio gigas [TaxId: 879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Aldehyde oxidoreductase species: Desulfovibrio gigas [TaxId: 879]
Probab=89.34 E-value=0.38 Score=20.95 Aligned_cols=59 Identities=7% Similarity=0.024 Sum_probs=40.7
Q ss_pred CCCEEEEEEECCCCEEEEEECCCCH-----HHHHHHHHHH---HCCCCCCEEEEEC------CCCCCCCCCCCC
Q ss_conf 9884799996589849999599882-----8999999988---1999972899936------557889999761
Q 000657 783 EPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHV---LGLPMSKVVCKTK------RIGGGFGGKETR 842 (1370)
Q Consensus 783 Ep~~a~A~~~~~~g~l~V~sstQ~p-----~~vr~~vA~~---Lgip~~kV~V~~~------~vGGgFGgK~~~ 842 (1370)
....+.+..+ .||.++|+++++.. ......+|+. ||+|.++|+|... +-+|.+|.+.+.
T Consensus 320 ~~~~a~v~l~-~dG~v~v~~g~~~~GqG~~T~~~qi~ae~l~~lGi~~e~V~v~~~DT~~~p~~~gt~gSr~t~ 392 (597)
T d1vlba4 320 DASEAWAELN-ADGTITVHTAWEDHGQGADIGCVGTAHEALRPMGVAPEKIKFTWPNTATTPNSGPSGGSRQQV 392 (597)
T ss_dssp CEEEEEEEEC-TTSCEEEECCCCCSSSCHHHHHHHHHHHHHGGGTCCGGGEEECCCBTTTSCCCCCSCTTCHHH
T ss_pred CCCHHEEEEE-CCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCEECCCCCCCCCCCCCCCCCCCEE
T ss_conf 3210002320-123310014544555321001221202333303868788530257776789987655514000
|
| >d1doia_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: 2Fe-2S ferredoxin-like family: 2Fe-2S ferredoxin-related domain: 2Fe-2S ferredoxin species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=89.26 E-value=0.3 Score=21.68 Aligned_cols=41 Identities=22% Similarity=0.351 Sum_probs=32.6
Q ss_pred EEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 9990368999737899851799755547788888711999813
Q 000657 29 RKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1370)
Q Consensus 29 ~~~~~~~~~~~~l~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1370)
--.++ ++++.+||+.+++.|+. .-.+|+.|.||.|.+.+..
T Consensus 37 ~~t~~-v~~g~tlLdaa~~aGi~-ip~~Cr~G~CgsC~~~v~~ 77 (128)
T d1doia_ 37 YGSLE-VNEGEYILEAAEAQGYD-WPFSCRAGACANCAAIVLE 77 (128)
T ss_dssp EEEEE-CCTTSCHHHHHHHTTCC-CCCSSSSSSSSTTEEEEEE
T ss_pred CEEEE-ECCCCHHHHHHHHCCCC-CCCCCCCCCCCCCCEEEEE
T ss_conf 16999-79398199999985999-7657898959989358650
|
| >d1t3qb2 d.133.1.1 (B:166-786) Quinoline 2-oxidoreductase large subunit QorL {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Molybdenum cofactor-binding domain superfamily: Molybdenum cofactor-binding domain family: Molybdenum cofactor-binding domain domain: Quinoline 2-oxidoreductase large subunit QorL species: Pseudomonas putida [TaxId: 303]
Probab=86.98 E-value=0.53 Score=19.96 Aligned_cols=57 Identities=21% Similarity=0.263 Sum_probs=40.1
Q ss_pred CCEEEEEEECCCCEEEEEECCCCH-----HHHHHHHHHHHCCCCCCEEEEEC-----CCCCCCCCCCC
Q ss_conf 884799996589849999599882-----89999999881999972899936-----55788999976
Q 000657 784 PHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTK-----RIGGGFGGKET 841 (1370)
Q Consensus 784 p~~a~A~~~~~~g~l~V~sstQ~p-----~~vr~~vA~~Lgip~~kV~V~~~-----~vGGgFGgK~~ 841 (1370)
...+....+ .||.++|+++++.. ......+|+.||+|.++|+|... +-.|.+|++..
T Consensus 319 ~~~a~v~i~-~dG~v~v~~g~~e~GQG~~T~~aQiaAe~Lgip~d~V~v~~~dT~~~~~~gt~~Sr~t 385 (621)
T d1t3qb2 319 HDSATVRID-PTGKVTVTTSLASSGQGHETTLAQIAADVLGVPASDVVIQAGSTKNTYGFGAYASRGA 385 (621)
T ss_dssp CBEEEEEEC-TTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEEECSBTTSCCBCCSCTTCHH
T ss_pred CEEEEEEEC-CCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 216999987-6642664114443221110157788988615871106444158888888887576875
|