Citrus Sinensis ID: 000929
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1221 | ||||||
| 255569583 | 1223 | myosin vIII, putative [Ricinus communis] | 0.984 | 0.982 | 0.703 | 0.0 | |
| 356546900 | 1196 | PREDICTED: myosin-J heavy chain-like [Gl | 0.966 | 0.986 | 0.685 | 0.0 | |
| 225461317 | 1229 | PREDICTED: myosin-J heavy chain-like [Vi | 0.976 | 0.969 | 0.685 | 0.0 | |
| 302143081 | 1197 | unnamed protein product [Vitis vinifera] | 0.966 | 0.985 | 0.690 | 0.0 | |
| 356542250 | 1196 | PREDICTED: myosin-J heavy chain-like [Gl | 0.964 | 0.984 | 0.677 | 0.0 | |
| 145334819 | 1220 | myosin 2 [Arabidopsis thaliana] gi|33200 | 0.983 | 0.984 | 0.668 | 0.0 | |
| 110738812 | 1220 | myosin heavy chain [Arabidopsis thaliana | 0.983 | 0.984 | 0.668 | 0.0 | |
| 297796303 | 1219 | predicted protein [Arabidopsis lyrata su | 0.982 | 0.984 | 0.666 | 0.0 | |
| 224115074 | 1055 | predicted protein [Populus trichocarpa] | 0.862 | 0.998 | 0.698 | 0.0 | |
| 357452423 | 1292 | Myosin-like protein [Medicago truncatula | 0.968 | 0.914 | 0.617 | 0.0 |
| >gi|255569583|ref|XP_002525757.1| myosin vIII, putative [Ricinus communis] gi|223534907|gb|EEF36593.1| myosin vIII, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1719 bits (4453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 867/1233 (70%), Positives = 998/1233 (80%), Gaps = 31/1233 (2%)
Query: 1 MMLSASP-SMVARSSLEEMLESLRRRDEC-ERPKDLPPALPARPTSRARLPSARKSLPTD 58
MMLS SP S V RSSLEEML+S+RRRDE E+ KDLPPALPARPTSRARLPSARKSLPTD
Sbjct: 1 MMLSESPASTVTRSSLEEMLDSIRRRDEAMEKSKDLPPALPARPTSRARLPSARKSLPTD 60
Query: 59 FKVGEENGVKASMESA---EKRSSLNGKEDGKRKEKEWGAKRNNSFGSKKLRKEQTVVDL 115
FKVG +++ +E+ +KR K+D KRKEKE G K SFGSKK+RK+Q VD
Sbjct: 61 FKVGANGQLESKVETVVEVDKR-----KDDTKRKEKELGHK-TGSFGSKKMRKDQNCVDS 114
Query: 116 -PYDGGVMLDEEKVNEVLEVNEMKS-AKSGEVEWEDNLGYFIKKKLRVWCRLEDGKWESG 173
PY E+ NE + + S +K+ E +W+DN+GYFIKKKLR+WC+L +G+W SG
Sbjct: 115 NPY-------AEEKNEAVRGPVIASMSKAEEPDWDDNIGYFIKKKLRIWCQLANGQWGSG 167
Query: 174 MIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRY 233
IQSTSGDEA V LS GN VKVST +LLPANPDILEGVDDLI+LSYLNEPSVL N+++RY
Sbjct: 168 KIQSTSGDEAVVSLSAGNFVKVSTADLLPANPDILEGVDDLIKLSYLNEPSVLYNLKHRY 227
Query: 234 SRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVN 293
S+DMIYSKAGPVLIA NPFK VP+YGN+ I AY+QK++DSPHVYAIADTAYNEMM DG N
Sbjct: 228 SQDMIYSKAGPVLIAFNPFKVVPLYGNEIIGAYKQKLVDSPHVYAIADTAYNEMMRDGKN 287
Query: 294 QSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSS 353
QS+IISGESGAGKTETAK+AMQYLAALGGGS GIE EILQTN +LEAFGNAKT RN NSS
Sbjct: 288 QSLIISGESGAGKTETAKYAMQYLAALGGGSGGIETEILQTNCVLEAFGNAKTYRNGNSS 347
Query: 354 RFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLN 413
RFGKLIEIHFS+ GKICGAKIQTFLLEKSRVVQLA GERSYHIFYQLCAGAPS L+ERLN
Sbjct: 348 RFGKLIEIHFSSLGKICGAKIQTFLLEKSRVVQLANGERSYHIFYQLCAGAPSILRERLN 407
Query: 414 LKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNI 473
LK+A++YNYLNQSE L IDGVDDA F LMEAL+IV I K D+EQ F+MLAA+LWLGNI
Sbjct: 408 LKMASEYNYLNQSEGLVIDGVDDALKFEKLMEALEIVQISKADQEQAFSMLAAILWLGNI 467
Query: 474 SFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAID 533
SFQVIDNENHVEV+ADEA+T AA LMGCS ELMLALSTH+I+ GKD I KKLT +QAID
Sbjct: 468 SFQVIDNENHVEVLADEALTNAARLMGCSFHELMLALSTHRIRFGKDDIVKKLTFRQAID 527
Query: 534 SRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYA 593
RDALAKFIY SLFDW+VEQINKSLEVGK TGRSINILDIYGFESFK NSFEQFCINYA
Sbjct: 528 RRDALAKFIYASLFDWLVEQINKSLEVGKLRTGRSINILDIYGFESFKNNSFEQFCINYA 587
Query: 594 NERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFP 653
NERLQQHFNRHLFKLEQEEY+ DG+DWT+V+F+DN++CLNL EKKPLG+LSLLDEESNFP
Sbjct: 588 NERLQQHFNRHLFKLEQEEYDEDGIDWTKVDFDDNQDCLNLFEKKPLGLLSLLDEESNFP 647
Query: 654 KATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQL 713
ATDLTFANKLKQHLG N CFK ERGRAF +RHYAGEV YDTNGFLEKNRDPL +D+ QL
Sbjct: 648 NATDLTFANKLKQHLGGNPCFKAERGRAFVVRHYAGEVVYDTNGFLEKNRDPLHSDLFQL 707
Query: 714 LSSCTCQVLQLFASKMLKPSPKPAASS--QPGALDTQKQSVGTKFKGQLFKLMHQLENTR 771
LSSC+C++ QLF SKM S + +SS Q L++ KQSVGTKFKGQLFKLMHQLENT
Sbjct: 708 LSSCSCRLAQLFVSKM---SNQFVSSSFNQSYGLESSKQSVGTKFKGQLFKLMHQLENTT 764
Query: 772 PHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLL 831
PHFIRC+KPNSKQLPG +E+DLVLQQ RCCGVLE+VRISRSGYPTR+ HQ+FA RYG LL
Sbjct: 765 PHFIRCLKPNSKQLPGEHEDDLVLQQLRCCGVLEVVRISRSGYPTRITHQDFAQRYGFLL 824
Query: 832 SEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQK 891
S +SQDPLSISVAVLQQFN+LPEMYQVGYTK+YLR+G +A LE+ RKQVLQ I+ +QK
Sbjct: 825 SNTSVSQDPLSISVAVLQQFNILPEMYQVGYTKVYLRTGSIAKLEESRKQVLQGILGVQK 884
Query: 892 CFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCS---AVVPEIRDEQLREII 948
FRG Q R EL GV +QSF RGEN RR + S+ C+ P + D++L +I
Sbjct: 885 YFRGSQVRRDLNELKRGVTIIQSFVRGENARRNYNSIANRCAFRNEGPPTMVDKKLMAVI 944
Query: 949 CLQSAIRGWLVRKQLK-MHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTALAEL 1007
LQSAIRGWL RKQ KLK+ + N +R+ +K S++K +PQEQV L EL
Sbjct: 945 FLQSAIRGWLARKQFSDKRKLKELHE-NINSRRKHVKKISEVKVLPQEQVDIQAMILTEL 1003
Query: 1008 QRRVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQMSLAAA 1067
RRV KAE L QKE+ENA+LREQLQQ++ +W EYE KMK+ME+ WQ QM SLQ SLAAA
Sbjct: 1004 HRRVAKAEVALLQKEDENASLREQLQQFERRWSEYETKMKTMEQTWQMQMESLQASLAAA 1063
Query: 1068 RKSLASDNTPGEPGRLDASTSPHLYDSEDTMSMGSRTPGGSTPMKFLNIVPDAGSGRESN 1127
RKSLA+D+T G+ G+L++ +SPH YDSED MS G +TPG +TP K +PD GRE+N
Sbjct: 1064 RKSLAADSTAGQHGKLESFSSPHYYDSEDNMSTGVQTPGSNTPNKSSIAIPDVKLGRETN 1123
Query: 1128 GSLTAVNHLTKEFEQRRQNFDDDAKALIEIKT-TQPASTVHPDVELRKLKMRFETWKKDY 1186
GS+ AV+ L KEFEQ+RQNFDD AKAL E+K Q AS +PD ELRKLK+RFE WKKDY
Sbjct: 1124 GSINAVSILAKEFEQQRQNFDDHAKALAEVKLGQQSASDKNPDEELRKLKIRFEDWKKDY 1183
Query: 1187 KTRLREAKVRLNKLGQSEVEKTRRKWWEKISSR 1219
K RLRE KVRL+K+G+ E ++ R+WW KI R
Sbjct: 1184 KVRLRETKVRLHKVGRGEGDRRTRRWWGKIGPR 1216
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356546900|ref|XP_003541859.1| PREDICTED: myosin-J heavy chain-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|225461317|ref|XP_002281748.1| PREDICTED: myosin-J heavy chain-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|302143081|emb|CBI20376.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356542250|ref|XP_003539582.1| PREDICTED: myosin-J heavy chain-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|145334819|ref|NP_001078755.1| myosin 2 [Arabidopsis thaliana] gi|332009096|gb|AED96479.1| myosin 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|110738812|dbj|BAF01329.1| myosin heavy chain [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297796303|ref|XP_002866036.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297311871|gb|EFH42295.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|224115074|ref|XP_002316933.1| predicted protein [Populus trichocarpa] gi|222859998|gb|EEE97545.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|357452423|ref|XP_003596488.1| Myosin-like protein [Medicago truncatula] gi|355485536|gb|AES66739.1| Myosin-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1221 | ||||||
| TAIR|locus:2162550 | 1220 | ATM2 "myosin 2" [Arabidopsis t | 0.981 | 0.982 | 0.661 | 0.0 | |
| TAIR|locus:2011922 | 1153 | VIIIA [Arabidopsis thaliana (t | 0.800 | 0.847 | 0.603 | 1.2e-312 | |
| UNIPROTKB|F1M3R4 | 1844 | Myo5b "Unconventional myosin-V | 0.551 | 0.364 | 0.426 | 5.8e-176 | |
| UNIPROTKB|F1LUM1 | 1818 | Myo5b "Unconventional myosin-V | 0.551 | 0.370 | 0.426 | 5.8e-176 | |
| RGD|621347 | 1846 | Myo5b "myosin Vb" [Rattus norv | 0.551 | 0.364 | 0.426 | 2.5e-175 | |
| UNIPROTKB|P70569 | 1846 | Myo5b "Unconventional myosin-V | 0.551 | 0.364 | 0.426 | 2.5e-175 | |
| MGI|MGI:106598 | 1818 | Myo5b "myosin VB" [Mus musculu | 0.551 | 0.370 | 0.426 | 2.5e-175 | |
| UNIPROTKB|F1PX71 | 1823 | MYO5B "Uncharacterized protein | 0.558 | 0.374 | 0.423 | 2.2e-174 | |
| TAIR|locus:2199449 | 1529 | XIE [Arabidopsis thaliana (tax | 0.733 | 0.585 | 0.393 | 4.5e-165 | |
| TAIR|locus:2020270 | 1500 | XIB "myosin XI B" [Arabidopsis | 0.720 | 0.586 | 0.393 | 9.3e-165 |
| TAIR|locus:2162550 ATM2 "myosin 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4081 (1441.6 bits), Expect = 0., P = 0.
Identities = 816/1234 (66%), Positives = 968/1234 (78%)
Query: 1 MMLSASPSMVARSSLEEMLESLRRRDECERPKDLPPALPARPTSRARLPSARKSLPTDFK 60
MMLSASP+ +A+SSLEEMLESLR++DEC+RPKD+PPALP+RP SRARLPSAR+SLP +F
Sbjct: 1 MMLSASPNTLAKSSLEEMLESLRQKDECDRPKDMPPALPSRPNSRARLPSARRSLPANFN 60
Query: 61 VG----EENGVKASMESAEKRSSLNGKEDG-KRKEKEWGAKRNNSFGSKK----LRKEQT 111
V ++NG S+ A + S KE+G KRKEK+ G KRN SFGSKK LR E
Sbjct: 61 VSSVMEDQNGSVVSVTPAVEAES-ERKEEGVKRKEKDLGVKRN-SFGSKKMRTGLRSESP 118
Query: 112 VVDLPYDGGVMLDXXXXXXXXXXXXMKSAKSGEVEWEDNLGYFIKKKLRVWCRLEDGKWE 171
+ GV + +S EW +N+ YFIKKKLRVWCR+ +G+W+
Sbjct: 119 YAAEKEEEGVKISIAKVSLVENTEEHNKPES---EWNNNVEYFIKKKLRVWCRVSNGQWQ 175
Query: 172 SGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQY 231
G IQSTS D + V+LS NVVKVST EL PANPDILEGV+DLIQLSYLNEPSVL N++
Sbjct: 176 LGKIQSTSADTSLVMLSTANVVKVSTEELFPANPDILEGVEDLIQLSYLNEPSVLYNLRV 235
Query: 232 RYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDG 291
RY +D+IYSKAGPVLIAVNPFK V IYGN I+AY++KVMD+PHVYA+AD AY+EMM +
Sbjct: 236 RYLQDVIYSKAGPVLIAVNPFKNVEIYGNDVISAYQKKVMDAPHVYAVADAAYDEMMREE 295
Query: 292 VNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDN 351
NQS+IISGESGAGKTETAKFAMQYLAALGGGS G+EYEIL+T ILEAFGNAKTSRN N
Sbjct: 296 KNQSLIISGESGAGKTETAKFAMQYLAALGGGSCGVEYEILKTTCILEAFGNAKTSRNAN 355
Query: 352 SSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKER 411
SSRFGKLIEIHFSA GKICGAK++TFLLEKSRVVQL GERSYHIFY+LCAGA LKER
Sbjct: 356 SSRFGKLIEIHFSAMGKICGAKLETFLLEKSRVVQLFNGERSYHIFYELCAGASPILKER 415
Query: 412 LNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLG 471
L LK A++Y YL+QS+CLTI GVDDAQ FH L+EA DIV I KE +E+ FA+LAAVLWLG
Sbjct: 416 LKLKTASEYTYLSQSDCLTIAGVDDAQKFHKLLEAFDIVQIPKEHQERAFALLAAVLWLG 475
Query: 472 NISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQA 531
N+SF+V DNENHVEV+ADEAV AAMLMGC+++ELM+ LST K+QAG D IAKKLTL+QA
Sbjct: 476 NVSFRVTDNENHVEVVADEAVANAAMLMGCNTEELMVVLSTRKLQAGTDCIAKKLTLRQA 535
Query: 532 IDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCIN 591
D RD +AKFIY +LFDW+VEQIN +LEVGK TGRSI+ILDIYGFESFK NSFEQFCIN
Sbjct: 536 TDMRDGIAKFIYANLFDWLVEQINIALEVGKSRTGRSISILDIYGFESFKNNSFEQFCIN 595
Query: 592 YANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESN 651
YANERLQQHFNRHLFKLEQEEYE DG+DWT+VEF DN+ECL+LIEKKP+G+LSLLDEESN
Sbjct: 596 YANERLQQHFNRHLFKLEQEEYEEDGIDWTKVEFVDNQECLDLIEKKPIGLLSLLDEESN 655
Query: 652 FPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDII 711
FPKATDLTFANKLKQHL +NSCFKGERGRAF + HYAGEV YDTNGFLEKNRDPL D+I
Sbjct: 656 FPKATDLTFANKLKQHLKTNSCFKGERGRAFRVNHYAGEVLYDTNGFLEKNRDPLPADLI 715
Query: 712 QLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQLENTR 771
LLSSC CQ+L+LF D+ Q+VGTKFKGQLFKLM++LENT
Sbjct: 716 NLLSSCDCQLLKLFSTKMRGKSQKPLMLS-----DSTNQTVGTKFKGQLFKLMNKLENTS 770
Query: 772 PHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLL 831
PHFIRCIKPNSKQLP +YEEDLVLQQ RCCGVLE+VRISRSGYPTR+ HQEFAGRYG LL
Sbjct: 771 PHFIRCIKPNSKQLPRVYEEDLVLQQLRCCGVLEVVRISRSGYPTRLTHQEFAGRYGFLL 830
Query: 832 SEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQK 891
S+K+++QDPLS+S+AVL+Q++V PEMYQVGYTKLYLR+GQ+ EDRRK+VLQ I+ LQK
Sbjct: 831 SDKKVAQDPLSVSIAVLKQYDVHPEMYQVGYTKLYLRTGQIGIFEDRRKKVLQGIVGLQK 890
Query: 892 CFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQ 951
FRG+ +R+ F+ + + LQS+ RGEN RR + K + V E ++L +I LQ
Sbjct: 891 HFRGHLSRAYFQNMRKVTLVLQSYIRGENARRLFDTEAKFHADSVSEASTDELSAVIHLQ 950
Query: 952 SAIRGWLVRKQLK-MHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTALAELQRR 1010
SA+RGWL RK M + K+ V K KR++GR+ S+ KD+P EQ Q PT++++LQ+R
Sbjct: 951 SAVRGWLARKHFNSMQRQKELRNVATKSKRKAGRRISEDKDIPLEQPQVQPTSMSDLQKR 1010
Query: 1011 VLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQMSLAAARKS 1070
+LK+EA L QKEEEN ALREQL+Q++ +W EY+ KMKSMEE WQKQM+SLQMSLAAARKS
Sbjct: 1011 ILKSEAALSQKEEENTALREQLRQFEERWSEYDIKMKSMEETWQKQMSSLQMSLAAARKS 1070
Query: 1071 LASDNTPGEPG-RLDASTSPHLYDSEDTMSMGSRTPGGSTPM-KFLN-IVPDAGSGRESN 1127
LA+++ G+ G R D S SP YDSEDTMS G TPG TP KF N P+ RE N
Sbjct: 1071 LAAESITGQAGGRQDTSISPFGYDSEDTMSTG--TPGVRTPTNKFTNGNTPELRI-RELN 1127
Query: 1128 GSLTAVNHLTKEFEQRRQNFDDDAKALIEIK-----TTQPASTVHPDVELRKLKMRFETW 1182
GSL AVNHL +EF+QRR NFD+DA+A++E+K T HP+ E R+LK+RFETW
Sbjct: 1128 GSLNAVNHLAREFDQRRLNFDEDARAIVEVKLGPQATPNGQQQQHPEDEFRRLKLRFETW 1187
Query: 1183 KKDYKTRLREAKVRLNKLGQSEVEKTR-RKWWEK 1215
KKDYK RLR+ K RL+++ + +K R RKWW K
Sbjct: 1188 KKDYKARLRDTKARLHRV---DGDKGRHRKWWGK 1218
|
|
| TAIR|locus:2011922 VIIIA [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1M3R4 Myo5b "Unconventional myosin-Vb" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1LUM1 Myo5b "Unconventional myosin-Vb" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| RGD|621347 Myo5b "myosin Vb" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P70569 Myo5b "Unconventional myosin-Vb" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:106598 Myo5b "myosin VB" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PX71 MYO5B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2199449 XIE [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020270 XIB "myosin XI B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00027592001 | SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (1185 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1221 | |||
| cd01383 | 677 | cd01383, MYSc_type_VIII, Myosin motor domain, plan | 0.0 | |
| smart00242 | 677 | smart00242, MYSc, Myosin | 0.0 | |
| cd00124 | 679 | cd00124, MYSc, Myosin motor domain | 0.0 | |
| cd01377 | 693 | cd01377, MYSc_type_II, Myosin motor domain, type I | 0.0 | |
| pfam00063 | 679 | pfam00063, Myosin_head, Myosin head (motor domain) | 0.0 | |
| cd01384 | 674 | cd01384, MYSc_type_XI, Myosin motor domain, plant- | 0.0 | |
| cd01380 | 691 | cd01380, MYSc_type_V, Myosin motor domain, type V | 0.0 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 0.0 | |
| cd01378 | 674 | cd01378, MYSc_type_I, Myosin motor domain, type I | 0.0 | |
| cd01381 | 671 | cd01381, MYSc_type_VII, Myosin motor domain, type | 0.0 | |
| cd01387 | 677 | cd01387, MYSc_type_XV, Myosin motor domain, type X | 0.0 | |
| cd01385 | 692 | cd01385, MYSc_type_IX, Myosin motor domain, type I | 0.0 | |
| cd01382 | 717 | cd01382, MYSc_type_VI, Myosin motor domain, type V | 1e-173 | |
| cd01379 | 653 | cd01379, MYSc_type_III, Myosin motor domain, type | 1e-162 | |
| PTZ00014 | 821 | PTZ00014, PTZ00014, myosin-A; Provisional | 1e-145 | |
| cd01386 | 767 | cd01386, MYSc_type_XVIII, Myosin motor domain, typ | 2e-74 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 5e-14 | |
| smart00015 | 23 | smart00015, IQ, Calmodulin-binding motif | 0.002 |
| >gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
Score = 1299 bits (3363), Expect = 0.0
Identities = 540/678 (79%), Positives = 594/678 (87%), Gaps = 1/678 (0%)
Query: 202 PANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNK 261
PANPDIL+GVDDL+QLSYLNEPSVL N+QYRYS+D+IY+KAGPVL+AVNPFK VP+YGN
Sbjct: 1 PANPDILDGVDDLMQLSYLNEPSVLYNLQYRYSQDLIYTKAGPVLVAVNPFKEVPLYGND 60
Query: 262 FITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALG 321
+I AYR+K DSPHVYAIADTAYNEMM D VNQSIIISGESGAGKTETAK AMQYLA+LG
Sbjct: 61 YIEAYRKKSNDSPHVYAIADTAYNEMMRDEVNQSIIISGESGAGKTETAKIAMQYLASLG 120
Query: 322 GGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEK 381
GGS GIEYEILQTN ILEAFGNAKTSRNDNSSRFGKLIEIHFS GKI GAKIQTFLLEK
Sbjct: 121 GGS-GIEYEILQTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGAKIQTFLLEK 179
Query: 382 SRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 441
SRVVQ A GERSYHIFYQLCAGAP LKE+LNLK A++Y YL QS C +I+GVDDAQ FH
Sbjct: 180 SRVVQCARGERSYHIFYQLCAGAPPALKEKLNLKSASEYKYLKQSCCYSINGVDDAQRFH 239
Query: 442 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGC 501
L+EALDIV I KED+E FAMLAAVLWLGN+SF VIDNENHVE +ADEA++TAA L+GC
Sbjct: 240 TLVEALDIVHISKEDQENVFAMLAAVLWLGNVSFTVIDNENHVEPVADEALSTAAKLIGC 299
Query: 502 SSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVG 561
+ ++LMLALST K+ D+I +KLTLQQAID+RDALAK IY SLFDW+VEQINKSLEVG
Sbjct: 300 NIEDLMLALSTRKMHVNNDNIVQKLTLQQAIDARDALAKSIYASLFDWLVEQINKSLEVG 359
Query: 562 KQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWT 621
K+ TGRSI+ILDIYGFESF KNSFEQFCINYANERLQQHFNRHLFKLEQEEYE DG+DWT
Sbjct: 360 KRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYEEDGIDWT 419
Query: 622 RVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRA 681
+VEFEDN+ECL+L EKKPLG+LSLLDEES FP ATDLTFANKLKQHL +NSCF+GERG A
Sbjct: 420 KVEFEDNQECLDLFEKKPLGLLSLLDEESTFPNATDLTFANKLKQHLKTNSCFRGERGGA 479
Query: 682 FSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFASKMLKPSPKPAASSQ 741
F++RHYAGEV YDT GFLEKNRD L +D IQLLSSC CQ+ QLFAS ML SP
Sbjct: 480 FTVRHYAGEVTYDTTGFLEKNRDLLHSDSIQLLSSCKCQLPQLFASSMLIQSPVVGPLYV 539
Query: 742 PGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCC 801
A D+QK SVGTKFKGQLFKLM QLENT PHFIRCIKPN+KQLPGIYE+ LVLQQ RCC
Sbjct: 540 ASAADSQKLSVGTKFKGQLFKLMQQLENTTPHFIRCIKPNNKQLPGIYEQGLVLQQLRCC 599
Query: 802 GVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVG 861
GVLE+VRISRSGYPTRM HQEFA RYG LL E SQDPLS+SVA+LQQFN+LPEMYQVG
Sbjct: 600 GVLEVVRISRSGYPTRMTHQEFARRYGFLLLENIASQDPLSVSVAILQQFNILPEMYQVG 659
Query: 862 YTKLYLRSGQLAALEDRR 879
YTKL+ R+GQ+ ALED R
Sbjct: 660 YTKLFFRTGQIGALEDTR 677
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 677 |
| >gnl|CDD|214580 smart00242, MYSc, Myosin | Back alignment and domain information |
|---|
| >gnl|CDD|238071 cd00124, MYSc, Myosin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) | Back alignment and domain information |
|---|
| >gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
| >gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|197470 smart00015, IQ, Calmodulin-binding motif | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1221 | |||
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 100.0 | |
| PTZ00014 | 821 | myosin-A; Provisional | 100.0 | |
| cd01383 | 677 | MYSc_type_VIII Myosin motor domain, plant-specific | 100.0 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 100.0 | |
| cd01381 | 671 | MYSc_type_VII Myosin motor domain, type VII myosin | 100.0 | |
| cd01377 | 693 | MYSc_type_II Myosin motor domain, type II myosins. | 100.0 | |
| cd01380 | 691 | MYSc_type_V Myosin motor domain, type V myosins. M | 100.0 | |
| cd01384 | 674 | MYSc_type_XI Myosin motor domain, plant-specific t | 100.0 | |
| cd01378 | 674 | MYSc_type_I Myosin motor domain, type I myosins. M | 100.0 | |
| cd01387 | 677 | MYSc_type_XV Myosin motor domain, type XV myosins. | 100.0 | |
| cd01385 | 692 | MYSc_type_IX Myosin motor domain, type IX myosins. | 100.0 | |
| cd01382 | 717 | MYSc_type_VI Myosin motor domain, type VI myosins. | 100.0 | |
| smart00242 | 677 | MYSc Myosin. Large ATPases. ATPase; molecular moto | 100.0 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| cd01379 | 653 | MYSc_type_III Myosin motor domain, type III myosin | 100.0 | |
| cd00124 | 679 | MYSc Myosin motor domain. This catalytic (head) do | 100.0 | |
| cd01386 | 767 | MYSc_type_XVIII Myosin motor domain, type XVIII my | 100.0 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 100.0 | |
| KOG0162 | 1106 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 100.0 | |
| PF00063 | 689 | Myosin_head: Myosin head (motor domain); InterPro: | 100.0 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 98.69 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 98.37 | |
| PF02736 | 42 | Myosin_N: Myosin N-terminal SH3-like domain; Inter | 98.11 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 97.9 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 97.39 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 96.88 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.8 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.56 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 96.33 | |
| KOG0925 | 699 | consensus mRNA splicing factor ATP-dependent RNA h | 95.83 | |
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 95.4 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 94.7 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 94.63 | |
| PF13207 | 121 | AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 | 94.58 | |
| PTZ00014 | 821 | myosin-A; Provisional | 94.58 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 94.34 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 93.5 | |
| PF13238 | 129 | AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB | 93.34 | |
| PF13191 | 185 | AAA_16: AAA ATPase domain; PDB: 2V1U_A. | 93.31 | |
| PF13401 | 131 | AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S | 93.2 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 93.04 | |
| TIGR02322 | 179 | phosphon_PhnN phosphonate metabolism protein/1,5-b | 92.91 | |
| TIGR03015 | 269 | pepcterm_ATPase putative secretion ATPase, PEP-CTE | 92.77 | |
| cd02019 | 69 | NK Nucleoside/nucleotide kinase (NK) is a protein | 92.38 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 91.87 | |
| PF00004 | 132 | AAA: ATPase family associated with various cellula | 91.83 | |
| PRK05480 | 209 | uridine/cytidine kinase; Provisional | 91.64 | |
| cd01131 | 198 | PilT Pilus retraction ATPase PilT. PilT is a nucle | 91.57 | |
| smart00382 | 148 | AAA ATPases associated with a variety of cellular | 91.42 | |
| PRK13833 | 323 | conjugal transfer protein TrbB; Provisional | 91.39 | |
| PRK06696 | 223 | uridine kinase; Validated | 91.38 | |
| PF01583 | 156 | APS_kinase: Adenylylsulphate kinase; InterPro: IPR | 91.37 | |
| PRK00300 | 205 | gmk guanylate kinase; Provisional | 91.27 | |
| PF00485 | 194 | PRK: Phosphoribulokinase / Uridine kinase family; | 91.19 | |
| cd01918 | 149 | HprK_C HprK/P, the bifunctional histidine-containi | 91.08 | |
| TIGR00150 | 133 | HI0065_YjeE ATPase, YjeE family. Members of this f | 91.03 | |
| cd02023 | 198 | UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. | 91.01 | |
| cd01129 | 264 | PulE-GspE PulE/GspE The type II secretory pathway | 90.99 | |
| cd00820 | 107 | PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC | 90.98 | |
| COG0444 | 316 | DppD ABC-type dipeptide/oligopeptide/nickel transp | 90.85 | |
| PRK08233 | 182 | hypothetical protein; Provisional | 90.82 | |
| PRK05541 | 176 | adenylylsulfate kinase; Provisional | 90.82 | |
| TIGR00235 | 207 | udk uridine kinase. Model contains a number of lon | 90.78 | |
| COG0194 | 191 | Gmk Guanylate kinase [Nucleotide transport and met | 90.62 | |
| TIGR02173 | 171 | cyt_kin_arch cytidylate kinase, putative. Proteins | 90.59 | |
| PRK06762 | 166 | hypothetical protein; Provisional | 90.59 | |
| PRK09270 | 229 | nucleoside triphosphate hydrolase domain-containin | 90.55 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 90.42 | |
| cd02020 | 147 | CMPK Cytidine monophosphate kinase (CMPK) catalyze | 90.4 | |
| PRK07196 | 434 | fliI flagellum-specific ATP synthase; Validated | 90.24 | |
| PRK00131 | 175 | aroK shikimate kinase; Reviewed | 90.16 | |
| PRK06547 | 172 | hypothetical protein; Provisional | 90.12 | |
| PRK07261 | 171 | topology modulation protein; Provisional | 90.04 | |
| PTZ00301 | 210 | uridine kinase; Provisional | 89.99 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 89.88 | |
| cd02025 | 220 | PanK Pantothenate kinase (PanK) catalyzes the phos | 89.84 | |
| cd02028 | 179 | UMPK_like Uridine monophosphate kinase_like (UMPK_ | 89.81 | |
| cd00227 | 175 | CPT Chloramphenicol (Cm) phosphotransferase (CPT). | 89.8 | |
| PRK08118 | 167 | topology modulation protein; Reviewed | 89.69 | |
| PF12846 | 304 | AAA_10: AAA-like domain | 89.66 | |
| cd01130 | 186 | VirB11-like_ATPase Type IV secretory pathway compo | 89.58 | |
| PF13245 | 76 | AAA_19: Part of AAA domain | 89.51 | |
| PF05729 | 166 | NACHT: NACHT domain | 89.46 | |
| PF07724 | 171 | AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR | 89.4 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 88.97 | |
| PRK00889 | 175 | adenylylsulfate kinase; Provisional | 88.95 | |
| TIGR01313 | 163 | therm_gnt_kin carbohydrate kinase, thermoresistant | 88.92 | |
| PRK10078 | 186 | ribose 1,5-bisphosphokinase; Provisional | 88.9 | |
| TIGR01420 | 343 | pilT_fam pilus retraction protein PilT. This model | 88.88 | |
| PRK14737 | 186 | gmk guanylate kinase; Provisional | 88.62 | |
| PF03668 | 284 | ATP_bind_2: P-loop ATPase protein family; InterPro | 88.6 | |
| PRK08472 | 434 | fliI flagellum-specific ATP synthase; Validated | 88.6 | |
| PF00910 | 107 | RNA_helicase: RNA helicase; InterPro: IPR000605 He | 88.6 | |
| COG0572 | 218 | Udk Uridine kinase [Nucleotide transport and metab | 88.59 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 88.58 | |
| TIGR02782 | 299 | TrbB_P P-type conjugative transfer ATPase TrbB. Th | 88.57 | |
| PRK14738 | 206 | gmk guanylate kinase; Provisional | 88.47 | |
| cd00071 | 137 | GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. | 88.44 | |
| PRK13851 | 344 | type IV secretion system protein VirB11; Provision | 88.42 | |
| PRK03846 | 198 | adenylylsulfate kinase; Provisional | 88.34 | |
| cd02024 | 187 | NRK1 Nicotinamide riboside kinase (NRK) is an enzy | 88.33 | |
| cd02027 | 149 | APSK Adenosine 5'-phosphosulfate kinase (APSK) cat | 88.18 | |
| TIGR02524 | 358 | dot_icm_DotB Dot/Icm secretion system ATPase DotB. | 88.17 | |
| PRK06217 | 183 | hypothetical protein; Validated | 88.07 | |
| PRK13900 | 332 | type IV secretion system ATPase VirB11; Provisiona | 88.01 | |
| cd01120 | 165 | RecA-like_NTPases RecA-like NTPases. This family i | 87.91 | |
| TIGR00554 | 290 | panK_bact pantothenate kinase, bacterial type. Sho | 87.91 | |
| PF00437 | 270 | T2SE: Type II/IV secretion system protein; InterPr | 87.87 | |
| TIGR03263 | 180 | guanyl_kin guanylate kinase. Members of this famil | 87.83 | |
| PRK12377 | 248 | putative replication protein; Provisional | 87.81 | |
| PF03266 | 168 | NTPase_1: NTPase; InterPro: IPR004948 This entry r | 87.77 | |
| PRK14961 | 363 | DNA polymerase III subunits gamma and tau; Provisi | 87.54 | |
| TIGR02525 | 372 | plasmid_TraJ plasmid transfer ATPase TraJ. Members | 87.52 | |
| PF13671 | 143 | AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 | 87.42 | |
| cd00464 | 154 | SK Shikimate kinase (SK) is the fifth enzyme in th | 87.41 | |
| PRK10751 | 173 | molybdopterin-guanine dinucleotide biosynthesis pr | 87.18 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 87.02 | |
| COG1660 | 286 | Predicted P-loop-containing kinase [General functi | 86.81 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 86.79 | |
| TIGR01360 | 188 | aden_kin_iso1 adenylate kinase, isozyme 1 subfamil | 86.75 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 86.73 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 86.65 | |
| PF03205 | 140 | MobB: Molybdopterin guanine dinucleotide synthesis | 86.53 | |
| COG1125 | 309 | OpuBA ABC-type proline/glycine betaine transport s | 86.52 | |
| PRK04182 | 180 | cytidylate kinase; Provisional | 86.39 | |
| cd02021 | 150 | GntK Gluconate kinase (GntK) catalyzes the phospho | 86.39 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 86.24 | |
| PRK12402 | 337 | replication factor C small subunit 2; Reviewed | 86.19 | |
| PRK07667 | 193 | uridine kinase; Provisional | 86.15 | |
| PRK14087 | 450 | dnaA chromosomal replication initiation protein; P | 86.13 | |
| PRK08727 | 233 | hypothetical protein; Validated | 86.11 | |
| PRK12608 | 380 | transcription termination factor Rho; Provisional | 86.0 | |
| PRK13764 | 602 | ATPase; Provisional | 85.9 | |
| PRK14527 | 191 | adenylate kinase; Provisional | 85.75 | |
| PRK05057 | 172 | aroK shikimate kinase I; Reviewed | 85.73 | |
| COG1102 | 179 | Cmk Cytidylate kinase [Nucleotide transport and me | 85.5 | |
| TIGR02533 | 486 | type_II_gspE general secretory pathway protein E. | 85.43 | |
| PRK00440 | 319 | rfc replication factor C small subunit; Reviewed | 85.43 | |
| PRK04040 | 188 | adenylate kinase; Provisional | 85.37 | |
| PHA00729 | 226 | NTP-binding motif containing protein | 85.29 | |
| COG0563 | 178 | Adk Adenylate kinase and related kinases [Nucleoti | 85.27 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 85.23 | |
| PRK07003 | 830 | DNA polymerase III subunits gamma and tau; Validat | 85.23 | |
| PRK09825 | 176 | idnK D-gluconate kinase; Provisional | 85.09 | |
| COG4608 | 268 | AppF ABC-type oligopeptide transport system, ATPas | 84.91 | |
| cd03115 | 173 | SRP The signal recognition particle (SRP) mediates | 84.68 | |
| PRK14730 | 195 | coaE dephospho-CoA kinase; Provisional | 84.56 | |
| PHA02544 | 316 | 44 clamp loader, small subunit; Provisional | 84.48 | |
| PRK00698 | 205 | tmk thymidylate kinase; Validated | 84.41 | |
| cd02029 | 277 | PRK_like Phosphoribulokinase-like (PRK-like) is a | 84.36 | |
| TIGR01359 | 183 | UMP_CMP_kin_fam UMP-CMP kinase family. This subfam | 84.26 | |
| PRK14964 | 491 | DNA polymerase III subunits gamma and tau; Provisi | 84.26 | |
| PF03193 | 161 | DUF258: Protein of unknown function, DUF258; Inter | 84.25 | |
| PRK13894 | 319 | conjugal transfer ATPase TrbB; Provisional | 84.23 | |
| PF13555 | 62 | AAA_29: P-loop containing region of AAA domain | 84.01 | |
| TIGR00176 | 155 | mobB molybdopterin-guanine dinucleotide biosynthes | 83.8 | |
| TIGR03499 | 282 | FlhF flagellar biosynthetic protein FlhF. | 83.71 | |
| COG1618 | 179 | Predicted nucleotide kinase [Nucleotide transport | 83.7 | |
| PRK08116 | 268 | hypothetical protein; Validated | 83.55 | |
| PRK06761 | 282 | hypothetical protein; Provisional | 83.55 | |
| PF06005 | 72 | DUF904: Protein of unknown function (DUF904); Inte | 83.46 | |
| PRK14956 | 484 | DNA polymerase III subunits gamma and tau; Provisi | 83.4 | |
| PF07475 | 171 | Hpr_kinase_C: HPr Serine kinase C-terminal domain; | 83.38 | |
| cd01983 | 99 | Fer4_NifH The Fer4_NifH superfamily contains a var | 83.37 | |
| PRK08972 | 444 | fliI flagellum-specific ATP synthase; Validated | 83.35 | |
| PRK05416 | 288 | glmZ(sRNA)-inactivating NTPase; Provisional | 83.34 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 83.33 | |
| COG0802 | 149 | Predicted ATPase or kinase [General function predi | 83.32 | |
| PF02367 | 123 | UPF0079: Uncharacterised P-loop hydrolase UPF0079; | 83.31 | |
| COG4026 | 290 | Uncharacterized protein containing TOPRIM domain, | 83.27 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 83.26 | |
| PRK03839 | 180 | putative kinase; Provisional | 83.21 | |
| PF07728 | 139 | AAA_5: AAA domain (dynein-related subfamily); Inte | 83.05 | |
| PRK14531 | 183 | adenylate kinase; Provisional | 83.0 | |
| PRK08356 | 195 | hypothetical protein; Provisional | 82.98 | |
| cd03293 | 220 | ABC_NrtD_SsuB_transporters NrtD and SsuB are the A | 82.92 | |
| COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transp | 82.9 | |
| PRK14974 | 336 | cell division protein FtsY; Provisional | 82.9 | |
| PTZ00112 | 1164 | origin recognition complex 1 protein; Provisional | 82.89 | |
| TIGR02881 | 261 | spore_V_K stage V sporulation protein K. Members o | 82.87 | |
| KOG0924 | 1042 | consensus mRNA splicing factor ATP-dependent RNA h | 82.81 | |
| PF00625 | 183 | Guanylate_kin: Guanylate kinase; InterPro: IPR0081 | 82.75 | |
| PRK15453 | 290 | phosphoribulokinase; Provisional | 82.75 | |
| PRK14528 | 186 | adenylate kinase; Provisional | 82.71 | |
| PRK15093 | 330 | antimicrobial peptide ABC transporter ATP-binding | 82.71 | |
| TIGR03574 | 249 | selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Mem | 82.69 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 82.67 | |
| PRK13342 | 413 | recombination factor protein RarA; Reviewed | 82.64 | |
| TIGR02673 | 214 | FtsE cell division ATP-binding protein FtsE. This | 82.64 | |
| TIGR00455 | 184 | apsK adenylylsulfate kinase (apsK). Important resi | 82.64 | |
| TIGR01166 | 190 | cbiO cobalt transport protein ATP-binding subunit. | 82.64 | |
| TIGR00960 | 216 | 3a0501s02 Type II (General) Secretory Pathway (IIS | 82.55 | |
| cd01672 | 200 | TMPK Thymidine monophosphate kinase (TMPK), also k | 82.47 | |
| PRK14732 | 196 | coaE dephospho-CoA kinase; Provisional | 82.47 | |
| KOG0744 | 423 | consensus AAA+-type ATPase [Posttranslational modi | 82.41 | |
| TIGR02788 | 308 | VirB11 P-type DNA transfer ATPase VirB11. The VirB | 82.35 | |
| PRK11637 | 428 | AmiB activator; Provisional | 82.23 | |
| TIGR02868 | 529 | CydC thiol reductant ABC exporter, CydC subunit. T | 82.23 | |
| PRK11308 | 327 | dppF dipeptide transporter ATP-binding subunit; Pr | 82.22 | |
| cd03260 | 227 | ABC_PstB_phosphate_transporter Phosphate uptake is | 82.17 | |
| PRK14733 | 204 | coaE dephospho-CoA kinase; Provisional | 82.08 | |
| PF04665 | 241 | Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 | 82.05 | |
| PF00005 | 137 | ABC_tran: ABC transporter This structure is on hol | 82.03 | |
| cd03225 | 211 | ABC_cobalt_CbiO_domain1 Domain I of the ABC compon | 82.02 | |
| cd03259 | 213 | ABC_Carb_Solutes_like ABC Carbohydrate and Solute | 81.96 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 81.95 | |
| PRK15177 | 213 | Vi polysaccharide export ATP-binding protein VexC; | 81.94 | |
| cd03116 | 159 | MobB Molybdenum is an essential trace element in t | 81.94 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 81.88 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 81.88 | |
| TIGR00064 | 272 | ftsY signal recognition particle-docking protein F | 81.87 | |
| PRK10416 | 318 | signal recognition particle-docking protein FtsY; | 81.84 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 81.84 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 81.8 | |
| PRK10436 | 462 | hypothetical protein; Provisional | 81.71 | |
| PRK09473 | 330 | oppD oligopeptide transporter ATP-binding componen | 81.69 | |
| PRK09039 | 343 | hypothetical protein; Validated | 81.67 | |
| cd03255 | 218 | ABC_MJ0796_Lo1CDE_FtsE This family is comprised of | 81.65 | |
| PRK14957 | 546 | DNA polymerase III subunits gamma and tau; Provisi | 81.61 | |
| PRK13768 | 253 | GTPase; Provisional | 81.6 | |
| cd02034 | 116 | CooC The accessory protein CooC, which contains a | 81.59 | |
| TIGR03608 | 206 | L_ocin_972_ABC putative bacteriocin export ABC tra | 81.47 | |
| PRK15079 | 331 | oligopeptide ABC transporter ATP-binding protein O | 81.45 | |
| TIGR02902 | 531 | spore_lonB ATP-dependent protease LonB. Members of | 81.4 | |
| PRK06645 | 507 | DNA polymerase III subunits gamma and tau; Validat | 81.4 | |
| cd03292 | 214 | ABC_FtsE_transporter FtsE is a hydrophilic nucleot | 81.33 | |
| PRK09099 | 441 | type III secretion system ATPase; Provisional | 81.29 | |
| cd03258 | 233 | ABC_MetN_methionine_transporter MetN (also known a | 81.29 | |
| PRK09112 | 351 | DNA polymerase III subunit delta'; Validated | 81.29 | |
| cd03296 | 239 | ABC_CysA_sulfate_importer Part of the ABC transpor | 81.27 | |
| TIGR02880 | 284 | cbbX_cfxQ probable Rubsico expression protein CbbX | 81.26 | |
| PRK09111 | 598 | DNA polymerase III subunits gamma and tau; Validat | 81.19 | |
| PLN03025 | 319 | replication factor C subunit; Provisional | 81.16 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 81.11 | |
| PRK06620 | 214 | hypothetical protein; Validated | 81.09 | |
| cd03229 | 178 | ABC_Class3 This class is comprised of all BPD (Bin | 81.09 | |
| TIGR00152 | 188 | dephospho-CoA kinase. This model produces scores i | 81.04 | |
| COG2884 | 223 | FtsE Predicted ATPase involved in cell division [C | 81.03 | |
| cd01124 | 187 | KaiC KaiC is a circadian clock protein primarily f | 80.91 | |
| PRK11022 | 326 | dppD dipeptide transporter ATP-binding subunit; Pr | 80.86 | |
| PF01695 | 178 | IstB_IS21: IstB-like ATP binding protein; InterPro | 80.81 | |
| PRK03731 | 171 | aroL shikimate kinase II; Reviewed | 80.79 | |
| cd03224 | 222 | ABC_TM1139_LivF_branched LivF (TM1139) is part of | 80.68 | |
| cd03235 | 213 | ABC_Metallic_Cations ABC component of the metal-ty | 80.6 | |
| PRK04220 | 301 | 2-phosphoglycerate kinase; Provisional | 80.57 | |
| smart00072 | 184 | GuKc Guanylate kinase homologues. Active enzymes c | 80.52 | |
| PRK09087 | 226 | hypothetical protein; Validated | 80.48 | |
| PRK11176 | 582 | lipid transporter ATP-binding/permease protein; Pr | 80.48 | |
| PRK00023 | 225 | cmk cytidylate kinase; Provisional | 80.44 | |
| PRK02496 | 184 | adk adenylate kinase; Provisional | 80.42 | |
| TIGR00678 | 188 | holB DNA polymerase III, delta' subunit. At positi | 80.34 | |
| COG4619 | 223 | ABC-type uncharacterized transport system, ATPase | 80.34 | |
| cd02026 | 273 | PRK Phosphoribulokinase (PRK) is an enzyme involve | 80.32 | |
| cd03256 | 241 | ABC_PhnC_transporter ABC-type phosphate/phosphonat | 80.21 | |
| TIGR03864 | 236 | PQQ_ABC_ATP ABC transporter, ATP-binding subunit, | 80.21 | |
| COG1493 | 308 | HprK Serine kinase of the HPr protein, regulates c | 80.09 | |
| PRK14962 | 472 | DNA polymerase III subunits gamma and tau; Provisi | 80.09 |
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-205 Score=1880.94 Aligned_cols=770 Identities=45% Similarity=0.734 Sum_probs=702.3
Q ss_pred CCcEEEEEcCCCCEEEEEEEEeeC--CeEEEEe--cCCeEEEEeCCCcc--CCCCCccCCcCCccccccCCchhHHHHHH
Q 000929 157 KKLRVWCRLEDGKWESGMIQSTSG--DEAFVLL--SNGNVVKVSTGELL--PANPDILEGVDDLIQLSYLNEPSVLNNIQ 230 (1221)
Q Consensus 157 ~~~~vW~~~~~~~~~~~~i~~~~~--~~~~v~~--~~g~~~~v~~~~~~--~~np~~~~~~~Dl~~L~~LnE~svL~~L~ 230 (1221)
.+..||.|+.+.+|..|.|.+..- +.++-.. .+|....|....+. ..+||.++++|||+.|+|||||+|||||+
T Consensus 8 ~g~~~w~p~~e~~Wi~~~~~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~P~~~~vdDLt~LSyLNEpsVl~nL~ 87 (1463)
T COG5022 8 VGSGCWIPDEEKGWIWAEIIKEAFNKGKVTEEGKKEDGESVSVKKKVLGNDRIKLPKFDGVDDLTELSYLNEPAVLHNLE 87 (1463)
T ss_pred cCceeeeeccccceeeeeechhhhhccccccchhhccCcccceeehhcccccccCccccCchhhhhhhccCcHHHHHHHH
Confidence 488999999999999999988643 3332222 35655566655443 34577999999999999999999999999
Q ss_pred HHhhcCccccccCCceEeeCCCCCCCCCChHHHHHHhccCCC--CCchhhHHHHHHHhhhhCCCceEEEEcCCCCCChhH
Q 000929 231 YRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTE 308 (1221)
Q Consensus 231 ~Ry~~~~iYT~~G~iLiaVNP~k~l~iY~~~~~~~y~~~~~~--~PHiyavA~~Ay~~m~~~~~nQsIiisGESGAGKTe 308 (1221)
+||.+++||||.|.||||||||+++|||++++|+.|.++... +|||||||+.||+.|...++||||||||||||||||
T Consensus 88 kRY~n~~IYTYSGlvLIAvNPy~~L~iYt~d~i~~Y~~K~r~el~PHvfAIAe~aY~~lls~~eNQtIiISGESGAGKTe 167 (1463)
T COG5022 88 KRYNNGQIYTYSGLVLIAVNPYRDLGIYTDDIIQSYSGKNRLELEPHVFAIAEEAYRNLLSEKENQTIIISGESGAGKTE 167 (1463)
T ss_pred HHhhcCceeEEeeeEEEEecCcccCCCccHHHHHHhccCccccCCchHHHHHHHHHHHHHhcCCCceEEEecCCCCCchH
Confidence 999999999999999999999999999999999999998866 799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCc----cHHHHHHhhhHHHHHhhcCccCCCCCCCccccEEEEEecCCCceeeeeeeeeeccCcee
Q 000929 309 TAKFAMQYLAALGGGSE----GIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRV 384 (1221)
Q Consensus 309 t~K~il~yLa~~~~~~~----~ie~~il~snpiLEAFGNAkT~rN~NSSRFGK~i~l~f~~~g~i~Ga~i~tyLLEksRV 384 (1221)
+||.||+|||+++++++ .||.+||++||||||||||||+||||||||||||+|.||.+|.|+||+|++||||||||
T Consensus 168 ~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEAFGNAkTvRNdNSSRFGKyikI~Fd~~g~I~GA~I~~YLLEKSRV 247 (1463)
T COG5022 168 NAKRIMQYLASVTSSSTVEISSIEKQILATNPILEAFGNAKTVRNDNSSRFGKYIKIEFDENGEICGAKIETYLLEKSRV 247 (1463)
T ss_pred HHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHHhccccccccCCcccccceEEEEECCCCceechhhhhhhhhhhhh
Confidence 99999999999988765 89999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCcchHHHHHhcCCChhhHhhcCCCCCCCCCcccCCCccccCCcchHHHHHHHHHHHhhcCCChhhHHHHHHHH
Q 000929 385 VQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAML 464 (1221)
Q Consensus 385 v~q~~gERnfHIFYqLl~G~~~~~r~~l~L~~~~~y~yL~~~~~~~~~~~dD~~~f~~l~~Al~~lG~~~~e~~~i~~iL 464 (1221)
|+|+.+|||||||||||+|+++..++.+++..+.+|+||++++|..++|+||+++|+.|+.||++|||+.++|.+||+||
T Consensus 248 V~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~~~~dY~Yl~~~~~~~I~gIdD~kefk~t~~AlktiGi~~eeq~~IF~iL 327 (1463)
T COG5022 248 VHQNKNERNYHIFYQLLAGDPEELKKLLLLQNPKDYIYLSQGGCDKIDGIDDAKEFKITLDALKTIGIDEEEQDQIFKIL 327 (1463)
T ss_pred ccCCCCccchhhhhhHhcCChHHHHHHhhccChHhhHhHhhcCCCcCCCcccHHHHHHHHHHHHHhCCChHHHHHHHHHH
Confidence 99999999999999999998888888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCceeeecCCCCcceecChHHHHHHHHhcCCCHHHHHHhhhhcEeecCCCeeeecCCHHHHHHHHHHHHHHHHH
Q 000929 465 AAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYG 544 (1221)
Q Consensus 465 aAILhLGNi~F~~~~~~~~~~~~~~~~l~~aA~LLGv~~~~L~~~L~~r~i~~~~e~i~~~l~~~qA~~~RDaLak~LY~ 544 (1221)
|||||||||+|..+ .++.+.+.+.+.++.||.|||||+..|.++|+.|.|++|+|.|.+++|..||..+||||||+||+
T Consensus 328 AaILhiGNIef~~~-r~g~a~~~~~~~~~~~c~LLgId~~~f~k~lvk~~ikt~~E~i~~~~n~~QA~~irdslAK~lY~ 406 (1463)
T COG5022 328 AAILHIGNIEFKED-RNGAAIFSDNSVLDKACYLLGIDPSLFVKWLVKRQIKTGGEWIVVPLNLEQALAIRDSLAKALYS 406 (1463)
T ss_pred HHHHhhcceeeeec-ccchhhcCCchHHHHHHHHhCCCHHHHHHHHHHhHhhcCceEEEecCCHHHHHHHHHHHHHHHHH
Confidence 99999999999964 34567778889999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhccccccCCCCCcceEEEecccCcccCCCCChHHHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCceeecc
Q 000929 545 SLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVE 624 (1221)
Q Consensus 545 ~LF~wlV~~IN~~L~~~~~~~~~~IgILDI~GFE~f~~NsfEQLcINyaNErLQ~~f~~~iF~~eq~eY~~EgI~~~~i~ 624 (1221)
+||+|||++||.+|..+.. ..+|||||||||||+|+.|||||||||||||||||+||+|||++||++|.+|||+|++|+
T Consensus 407 ~lFdwiV~rIN~sL~~~~~-~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~~Id 485 (1463)
T COG5022 407 NLFDWIVDRINKSLDHSAA-ASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWSFID 485 (1463)
T ss_pred HHHHHHHHHHHhhccCccc-cccceeEEeecchhhhccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCcccccc
Confidence 9999999999999987544 568999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChHHHHHHHhc-CCCCcccccccccCCCCCchHHHHHHHHHHhC--CCCCccCCC--CCceEEeecCcceeeeccccc
Q 000929 625 FEDNEECLNLIEK-KPLGVLSLLDEESNFPKATDLTFANKLKQHLG--SNSCFKGER--GRAFSIRHYAGEVPYDTNGFL 699 (1221)
Q Consensus 625 f~dn~~~ldLie~-~p~Gil~lLDeE~~~p~~tD~~f~~kL~~~~~--~~~~f~~~~--~~~F~I~HyaG~V~Y~~~gfl 699 (1221)
|.|||+||||||+ .|.|||++|||||.+|.|||++|..||.+.+. +++.|.++| ...|+|.||||+|+|+++|||
T Consensus 486 y~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~rf~~~~FvvkHYAgDVeY~veg~l 565 (1463)
T COG5022 486 YFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDESFTSKLAQRLNKNSNPKFKKSRFRDNKFVVKHYAGDVEYDVEGFL 565 (1463)
T ss_pred cccCcchhHHHhccCCCchHhhhcHHhcCCCCCchHHHHHHHHHhccccCccccccccCCCceEEEeecccceeeccchh
Confidence 9999999999997 47999999999999999999999999999876 567788765 568999999999999999999
Q ss_pred hhccCcchHHHHHHHhhchHHH-HHHhhcccCCCCCCCCCCCCCCCCCcCccchHHHHHHHHHHHHHHHcccCCeeEEec
Q 000929 700 EKNRDPLQTDIIQLLSSCTCQV-LQLFASKMLKPSPKPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCI 778 (1221)
Q Consensus 700 eKNrD~l~~d~~~ll~~S~~~l-~~lf~~~~~~~~~~~~~~~~~g~~~~~~~tV~~~Fk~qL~~Lm~~L~~t~~hfIrCI 778 (1221)
+||+|+++.++++||..|++++ ..+|.......+ ..+++||++.||.||.+||.+|++|+|||||||
T Consensus 566 dKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~~~~------------K~~~pT~gs~~K~sl~~Lm~tl~sTqphyIRCI 633 (1463)
T COG5022 566 DKNKDPLNDDLLELLKASTNEFVSTLFDDEENIES------------KGRFPTLGSRFKESLNSLMSTLNSTQPHYIRCI 633 (1463)
T ss_pred hhCcchhhHHHHHHHhhccchHHHHhhhhhhhccc------------cCCCCcHHHHHHHHHHHHHHHHHhcCCceeEee
Confidence 9999999999999999999986 568863322111 235689999999999999999999999999999
Q ss_pred CCCCCCCCCccchhhhhhhhhccchhHHHHHhhcCCceecchhhhHHhhhccccccccC------CChHHHHHHHHHhhc
Q 000929 779 KPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLS------QDPLSISVAVLQQFN 852 (1221)
Q Consensus 779 kPN~~~~p~~fd~~~V~~QLr~~gvle~vri~r~Gyp~R~~~~eF~~RY~~L~~~~~~~------~d~~~~~~~IL~~l~ 852 (1221)
|||..|.|+.||..+|++|||||||||+|||+|+|||.|++|+||+.||++|.|..... .|.+.+|..||..+.
T Consensus 634 kPN~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~~~~~~~~~~~~~~~~~IL~~~~ 713 (1463)
T COG5022 634 KPNEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSWTGEYTWKEDTKNAVKSILEELV 713 (1463)
T ss_pred CCCcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999976543 345889999999999
Q ss_pred CCCcceeecceeeeeccchhhHhhhhhhhhHH-HHHHHHHHHhHHHHhHhhhhhhhchhhhhhhhhhHHHHHHHHHhhh-
Q 000929 853 VLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQ-AIIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGK- 930 (1221)
Q Consensus 853 i~~~~yqvGkTKVFLR~g~l~~LE~~R~~~l~-Aai~IQa~~Rg~laRk~y~~lr~aai~IQs~~Rg~~aRr~y~~lr~- 930 (1221)
++...||+|.|||||++|+++.||.+|...++ .++.||++|||+..|++|.+..+.+..+|...+|...|+.+..-..
T Consensus 714 id~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~~ 793 (1463)
T COG5022 714 IDSSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKW 793 (1463)
T ss_pred CChhheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchHH
Confidence 99999999999999999999999999999886 6789999999999999999888777777777666666654432111
Q ss_pred hhhccchhhH
Q 000929 931 SCSAVVPEIR 940 (1221)
Q Consensus 931 ~AAi~IQ~~~ 940 (1221)
++++.+|..|
T Consensus 794 ~~~~~l~~~~ 803 (1463)
T COG5022 794 RLFIKLQPLL 803 (1463)
T ss_pred HhHHHhhHHh
Confidence 1444555444
|
|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01381 MYSc_type_VII Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >cd01377 MYSc_type_II Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >cd01380 MYSc_type_V Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
| >cd01378 MYSc_type_I Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >cd01387 MYSc_type_XV Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >cd01385 MYSc_type_IX Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >cd01382 MYSc_type_VI Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >smart00242 MYSc Myosin | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01379 MYSc_type_III Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >cd00124 MYSc Myosin motor domain | Back alignment and domain information |
|---|
| >cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0162 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0925 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] | Back alignment and domain information |
|---|
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A | Back alignment and domain information |
|---|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C | Back alignment and domain information |
|---|
| >PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A | Back alignment and domain information |
|---|
| >PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | Back alignment and domain information |
|---|
| >TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport | Back alignment and domain information |
|---|
| >PRK05480 uridine/cytidine kinase; Provisional | Back alignment and domain information |
|---|
| >cd01131 PilT Pilus retraction ATPase PilT | Back alignment and domain information |
|---|
| >smart00382 AAA ATPases associated with a variety of cellular activities | Back alignment and domain information |
|---|
| >PRK13833 conjugal transfer protein TrbB; Provisional | Back alignment and domain information |
|---|
| >PRK06696 uridine kinase; Validated | Back alignment and domain information |
|---|
| >PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >PRK00300 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 | Back alignment and domain information |
|---|
| >cd01918 HprK_C HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria | Back alignment and domain information |
|---|
| >TIGR00150 HI0065_YjeE ATPase, YjeE family | Back alignment and domain information |
|---|
| >cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) | Back alignment and domain information |
|---|
| >cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis | Back alignment and domain information |
|---|
| >COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK08233 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK05541 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR00235 udk uridine kinase | Back alignment and domain information |
|---|
| >COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02173 cyt_kin_arch cytidylate kinase, putative | Back alignment and domain information |
|---|
| >PRK06762 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor | Back alignment and domain information |
|---|
| >PRK07196 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PRK00131 aroK shikimate kinase; Reviewed | Back alignment and domain information |
|---|
| >PRK06547 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK07261 topology modulation protein; Provisional | Back alignment and domain information |
|---|
| >PTZ00301 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway | Back alignment and domain information |
|---|
| >cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT) | Back alignment and domain information |
|---|
| >PRK08118 topology modulation protein; Reviewed | Back alignment and domain information |
|---|
| >PF12846 AAA_10: AAA-like domain | Back alignment and domain information |
|---|
| >cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases | Back alignment and domain information |
|---|
| >PF13245 AAA_19: Part of AAA domain | Back alignment and domain information |
|---|
| >PF05729 NACHT: NACHT domain | Back alignment and domain information |
|---|
| >PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >PRK00889 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family | Back alignment and domain information |
|---|
| >PRK10078 ribose 1,5-bisphosphokinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01420 pilT_fam pilus retraction protein PilT | Back alignment and domain information |
|---|
| >PRK14737 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins | Back alignment and domain information |
|---|
| >PRK08472 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) | Back alignment and domain information |
|---|
| >COG0572 Udk Uridine kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB | Back alignment and domain information |
|---|
| >PRK14738 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 | Back alignment and domain information |
|---|
| >PRK13851 type IV secretion system protein VirB11; Provisional | Back alignment and domain information |
|---|
| >PRK03846 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+) | Back alignment and domain information |
|---|
| >cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS) | Back alignment and domain information |
|---|
| >TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB | Back alignment and domain information |
|---|
| >PRK06217 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK13900 type IV secretion system ATPase VirB11; Provisional | Back alignment and domain information |
|---|
| >cd01120 RecA-like_NTPases RecA-like NTPases | Back alignment and domain information |
|---|
| >TIGR00554 panK_bact pantothenate kinase, bacterial type | Back alignment and domain information |
|---|
| >PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] | Back alignment and domain information |
|---|
| >TIGR03263 guanyl_kin guanylate kinase | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency [] | Back alignment and domain information |
|---|
| >PRK14961 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ | Back alignment and domain information |
|---|
| >PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B | Back alignment and domain information |
|---|
| >cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants | Back alignment and domain information |
|---|
| >PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >COG1660 Predicted P-loop-containing kinase [General function prediction only] | Back alignment and domain information |
|---|
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A | Back alignment and domain information |
|---|
| >COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK04182 cytidylate kinase; Provisional | Back alignment and domain information |
|---|
| >cd02021 GntK Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PRK12402 replication factor C small subunit 2; Reviewed | Back alignment and domain information |
|---|
| >PRK07667 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK14087 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK12608 transcription termination factor Rho; Provisional | Back alignment and domain information |
|---|
| >PRK13764 ATPase; Provisional | Back alignment and domain information |
|---|
| >PRK14527 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK05057 aroK shikimate kinase I; Reviewed | Back alignment and domain information |
|---|
| >COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02533 type_II_gspE general secretory pathway protein E | Back alignment and domain information |
|---|
| >PRK00440 rfc replication factor C small subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK04040 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PHA00729 NTP-binding motif containing protein | Back alignment and domain information |
|---|
| >COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PRK07003 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK09825 idnK D-gluconate kinase; Provisional | Back alignment and domain information |
|---|
| >COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes | Back alignment and domain information |
|---|
| >PRK14730 coaE dephospho-CoA kinase; Provisional | Back alignment and domain information |
|---|
| >PHA02544 44 clamp loader, small subunit; Provisional | Back alignment and domain information |
|---|
| >PRK00698 tmk thymidylate kinase; Validated | Back alignment and domain information |
|---|
| >cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes | Back alignment and domain information |
|---|
| >TIGR01359 UMP_CMP_kin_fam UMP-CMP kinase family | Back alignment and domain information |
|---|
| >PRK14964 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis | Back alignment and domain information |
|---|
| >PRK13894 conjugal transfer ATPase TrbB; Provisional | Back alignment and domain information |
|---|
| >PF13555 AAA_29: P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB | Back alignment and domain information |
|---|
| >TIGR03499 FlhF flagellar biosynthetic protein FlhF | Back alignment and domain information |
|---|
| >COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK06761 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF06005 DUF904: Protein of unknown function (DUF904); InterPro: IPR009252 Cell division protein ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation | Back alignment and domain information |
|---|
| >PRK14956 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF07475 Hpr_kinase_C: HPr Serine kinase C-terminal domain; InterPro: IPR011104 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] | Back alignment and domain information |
|---|
| >cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain | Back alignment and domain information |
|---|
| >PRK08972 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >COG0802 Predicted ATPase or kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop | Back alignment and domain information |
|---|
| >COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK03839 putative kinase; Provisional | Back alignment and domain information |
|---|
| >PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >PRK14531 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK08356 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively | Back alignment and domain information |
|---|
| >COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK14974 cell division protein FtsY; Provisional | Back alignment and domain information |
|---|
| >PTZ00112 origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02881 spore_V_K stage V sporulation protein K | Back alignment and domain information |
|---|
| >KOG0924 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF00625 Guanylate_kin: Guanylate kinase; InterPro: IPR008144 Guanylate kinase (2 | Back alignment and domain information |
|---|
| >PRK15453 phosphoribulokinase; Provisional | Back alignment and domain information |
|---|
| >PRK14528 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PRK13342 recombination factor protein RarA; Reviewed | Back alignment and domain information |
|---|
| >TIGR02673 FtsE cell division ATP-binding protein FtsE | Back alignment and domain information |
|---|
| >TIGR00455 apsK adenylylsulfate kinase (apsK) | Back alignment and domain information |
|---|
| >TIGR01166 cbiO cobalt transport protein ATP-binding subunit | Back alignment and domain information |
|---|
| >TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein | Back alignment and domain information |
|---|
| >cd01672 TMPK Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor | Back alignment and domain information |
|---|
| >PRK14732 coaE dephospho-CoA kinase; Provisional | Back alignment and domain information |
|---|
| >KOG0744 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR02788 VirB11 P-type DNA transfer ATPase VirB11 | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >TIGR02868 CydC thiol reductant ABC exporter, CydC subunit | Back alignment and domain information |
|---|
| >PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient | Back alignment and domain information |
|---|
| >PRK14733 coaE dephospho-CoA kinase; Provisional | Back alignment and domain information |
|---|
| >PF04665 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 This entry contains uncharacterised proteins belonging to the B354L family which include the pox virus A32 protein | Back alignment and domain information |
|---|
| >PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems | Back alignment and domain information |
|---|
| >cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota | Back alignment and domain information |
|---|
| >cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional | Back alignment and domain information |
|---|
| >cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR00064 ftsY signal recognition particle-docking protein FtsY | Back alignment and domain information |
|---|
| >PRK10416 signal recognition particle-docking protein FtsY; Provisional | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
| >PRK10436 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) | Back alignment and domain information |
|---|
| >PRK14957 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK13768 GTPase; Provisional | Back alignment and domain information |
|---|
| >cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) | Back alignment and domain information |
|---|
| >TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group | Back alignment and domain information |
|---|
| >PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional | Back alignment and domain information |
|---|
| >TIGR02902 spore_lonB ATP-dependent protease LonB | Back alignment and domain information |
|---|
| >PRK06645 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane | Back alignment and domain information |
|---|
| >PRK09099 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport | Back alignment and domain information |
|---|
| >PRK09112 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import | Back alignment and domain information |
|---|
| >TIGR02880 cbbX_cfxQ probable Rubsico expression protein CbbX | Back alignment and domain information |
|---|
| >PRK09111 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PLN03025 replication factor C subunit; Provisional | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment | Back alignment and domain information |
|---|
| >TIGR00152 dephospho-CoA kinase | Back alignment and domain information |
|---|
| >COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs | Back alignment and domain information |
|---|
| >PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif | Back alignment and domain information |
|---|
| >PRK03731 aroL shikimate kinase II; Reviewed | Back alignment and domain information |
|---|
| >cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids | Back alignment and domain information |
|---|
| >cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters | Back alignment and domain information |
|---|
| >PRK04220 2-phosphoglycerate kinase; Provisional | Back alignment and domain information |
|---|
| >smart00072 GuKc Guanylate kinase homologues | Back alignment and domain information |
|---|
| >PRK09087 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK11176 lipid transporter ATP-binding/permease protein; Provisional | Back alignment and domain information |
|---|
| >PRK00023 cmk cytidylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK02496 adk adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR00678 holB DNA polymerase III, delta' subunit | Back alignment and domain information |
|---|
| >COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >cd02026 PRK Phosphoribulokinase (PRK) is an enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes | Back alignment and domain information |
|---|
| >cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system | Back alignment and domain information |
|---|
| >TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system | Back alignment and domain information |
|---|
| >COG1493 HprK Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK14962 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1221 | ||||
| 2dfs_A | 1080 | 3-D Structure Of Myosin-V Inhibited State Length = | 1e-171 | ||
| 2xel_A | 776 | Molecular Mechanism Of Pentachloropseudilin Mediate | 1e-165 | ||
| 1w9j_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-165 | ||
| 2jhr_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-165 | ||
| 3mnq_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-165 | ||
| 1jwy_A | 776 | Crystal Structure Of The Dynamin A Gtpase Domain Co | 1e-165 | ||
| 2aka_A | 776 | Structure Of The Nucleotide-Free Myosin Ii Motor Do | 1e-165 | ||
| 2xo8_A | 776 | Crystal Structure Of Myosin-2 In Complex With Tribr | 1e-165 | ||
| 1w9i_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-165 | ||
| 1g8x_A | 1010 | Structure Of A Genetically Engineered Molecular Mot | 1e-164 | ||
| 1yv3_A | 762 | The Structural Basis Of Blebbistatin Inhibition And | 1e-164 | ||
| 1w9l_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-164 | ||
| 1mma_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-164 | ||
| 3myh_X | 762 | Insights Into The Importance Of Hydrogen Bonding In | 1e-164 | ||
| 1d0x_A | 761 | Dictyostelium Myosin S1dc (Motor Domain Fragment) C | 1e-164 | ||
| 1mmg_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-163 | ||
| 1w9k_A | 770 | Dictyostelium Discoideum Myosin Ii Motor Domain S45 | 1e-163 | ||
| 2y0r_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-163 | ||
| 1oe9_A | 795 | Crystal Structure Of Myosin V Motor With Essential | 1e-163 | ||
| 1mmn_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-163 | ||
| 1fmv_A | 761 | Crystal Structure Of The Apo Motor Domain Of Dictyo | 1e-163 | ||
| 2y9e_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-163 | ||
| 1mmd_A | 762 | Truncated Head Of Myosin From Dictyostelium Discoid | 1e-163 | ||
| 1lvk_A | 762 | X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N | 1e-163 | ||
| 1w8j_A | 766 | Crystal Structure Of Myosin V Motor Domain - Nucleo | 1e-159 | ||
| 1b7t_A | 835 | Myosin Digested By Papain Length = 835 | 1e-156 | ||
| 1dfl_A | 831 | Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra | 1e-156 | ||
| 1dfk_A | 830 | Nucleotide-Free Scallop Myosin S1-Near Rigor State | 1e-156 | ||
| 1kk7_A | 837 | Scallop Myosin In The Near Rigor Conformation Lengt | 1e-156 | ||
| 1qvi_A | 840 | Crystal Structure Of Scallop Myosin S1 In The Pre-P | 1e-156 | ||
| 2ec6_A | 838 | Placopecten Striated Muscle Myosin Ii Length = 838 | 1e-154 | ||
| 2w4g_M | 840 | Isometrically Contracting Insect Asynchronous Fligh | 1e-153 | ||
| 2os8_A | 840 | Rigor-Like Structures Of Muscle Myosins Reveal Key | 1e-153 | ||
| 3mkd_A | 692 | Crystal Structure Of Myosin-2 Dictyostelium Discoid | 1e-153 | ||
| 2x9h_A | 695 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-152 | ||
| 1i84_S | 1184 | Cryo-Em Structure Of The Heavy Meromyosin Subfragme | 1e-152 | ||
| 3dtp_B | 973 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-150 | ||
| 3dtp_A | 971 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-150 | ||
| 3j04_A | 909 | Em Structure Of The Heavy Meromyosin Subfragment Of | 1e-150 | ||
| 1br1_A | 820 | Smooth Muscle Myosin Motor Domain-Essential Light C | 1e-149 | ||
| 1br2_A | 791 | Smooth Muscle Myosin Motor Domain Complexed With Mg | 1e-146 | ||
| 4db1_A | 783 | Cardiac Human Myosin S1dc, Beta Isoform Complexed W | 1e-145 | ||
| 3i5g_A | 839 | Crystal Structure Of Rigor-Like Squid Myosin S1 Len | 1e-141 | ||
| 2mys_A | 843 | Myosin Subfragment-1, Alpha Carbon Coordinates Only | 1e-140 | ||
| 1m8q_A | 840 | Molecular Models Of Averaged Rigor Crossbridges Fro | 1e-140 | ||
| 2ycu_A | 995 | Crystal Structure Of Human Non Muscle Myosin 2c In | 1e-133 | ||
| 2vas_A | 788 | Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo | 1e-127 | ||
| 2x51_A | 789 | M6 Delta Insert1 Length = 789 | 1e-127 | ||
| 4dbq_A | 788 | Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos | 1e-127 | ||
| 3l9i_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant | 1e-124 | ||
| 2bki_A | 858 | Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St | 1e-123 | ||
| 2bkh_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 1e-123 | ||
| 4e7z_A | 798 | Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F | 1e-123 | ||
| 2v26_A | 784 | Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L | 1e-123 | ||
| 4e7s_A | 798 | Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat | 1e-123 | ||
| 4anj_A | 1052 | Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St | 1e-123 | ||
| 4dbp_A | 814 | Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal | 1e-123 | ||
| 4dbr_A | 786 | Myosin Vi D179y (md) Pre-powerstroke State Length = | 1e-123 | ||
| 4a7f_C | 697 | Structure Of The Actin-Tropomyosin-Myosin Complex ( | 1e-121 | ||
| 1lkx_A | 697 | Motor Domain Of Myoe, A Class-I Myosin Length = 697 | 1e-121 |
| >pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 | Back alignment and structure |
|
| >pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 | Back alignment and structure |
| >pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 | Back alignment and structure |
| >pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 | Back alignment and structure |
| >pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 | Back alignment and structure |
| >pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 | Back alignment and structure |
| >pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 | Back alignment and structure |
| >pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 | Back alignment and structure |
| >pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 | Back alignment and structure |
| >pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 | Back alignment and structure |
| >pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 | Back alignment and structure |
| >pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 | Back alignment and structure |
| >pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 | Back alignment and structure |
| >pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 | Back alignment and structure |
| >pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 | Back alignment and structure |
| >pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 | Back alignment and structure |
| >pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 | Back alignment and structure |
| >pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 | Back alignment and structure |
| >pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 | Back alignment and structure |
| >pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 | Back alignment and structure |
| >pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 | Back alignment and structure |
| >pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 | Back alignment and structure |
| >pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 | Back alignment and structure |
| >pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 | Back alignment and structure |
| >pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 | Back alignment and structure |
| >pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 | Back alignment and structure |
| >pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 | Back alignment and structure |
| >pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 | Back alignment and structure |
| >pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 | Back alignment and structure |
| >pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 | Back alignment and structure |
| >pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 | Back alignment and structure |
| >pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 | Back alignment and structure |
| >pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 | Back alignment and structure |
| >pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 | Back alignment and structure |
| >pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 | Back alignment and structure |
| >pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 | Back alignment and structure |
| >pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 | Back alignment and structure |
| >pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 | Back alignment and structure |
| >pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 | Back alignment and structure |
| >pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 | Back alignment and structure |
| >pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 | Back alignment and structure |
| >pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 | Back alignment and structure |
| >pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 | Back alignment and structure |
| >pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 | Back alignment and structure |
| >pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 | Back alignment and structure |
| >pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1221 | |||
| 2ycu_A | 995 | Non muscle myosin 2C, alpha-actinin; motor protein | 0.0 | |
| 1g8x_A | 1010 | Myosin II heavy chain fused to alpha-actinin 3; mo | 0.0 | |
| 1w7j_A | 795 | Myosin VA; motor protein, unconventional myosin, m | 0.0 | |
| 2v26_A | 784 | Myosin VI; calmodulin-binding, nucleotide-binding, | 0.0 | |
| 1w9i_A | 770 | Myosin II heavy chain; molecular motor, ATPase, mo | 0.0 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 0.0 | |
| 1kk8_A | 837 | Myosin heavy chain, striated muscle; actin-detache | 0.0 | |
| 4db1_A | 783 | Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb | 0.0 | |
| 1lkx_A | 697 | Myosin IE heavy chain; myosin motor domain, lever | 0.0 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 0.0 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-23 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-08 | |
| 2ix7_C | 58 | Myosin-5A; contractIle protein/metal binding, acti | 6e-10 |
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
Score = 1127 bits (2916), Expect = 0.0
Identities = 307/983 (31%), Positives = 483/983 (49%), Gaps = 66/983 (6%)
Query: 154 FIKKKLRVWCRLEDGKWESGMIQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVD 212
+ ++ VW E +E+ ++ +EA V L +G +++ ++ NP +
Sbjct: 5 WTARR-LVWVPSELHGFEAAALRDEGEEEAEVELAESGRRLRLPRDQIQRMNPPKFSKAE 63
Query: 213 DLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD 272
D+ +L+ LNE SVL+N++ RY +IY+ +G + +NP+K +PIY + YR K
Sbjct: 64 DMAELTCLNEASVLHNLRERYYSGLIYTYSGLFCVVINPYKQLPIYTEAIVEMYRGKKRH 123
Query: 273 --SPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEG---- 326
PHVYA+ + AY M+ D +QSI+ +GESGAGKTE K +QYLA + +G
Sbjct: 124 EVPPHVYAVTEGAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSPKGRKEP 183
Query: 327 -----IEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEK 381
+E ++LQ N ILEAFGNAKT +NDNSSRFGK I I+F G I GA I+T+LLEK
Sbjct: 184 GVPGELERQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVAGYIVGANIETYLLEK 243
Query: 382 SRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 441
SR ++ A E S+HIFYQL GA LK L L+ + Y +L + + F
Sbjct: 244 SRAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPCSHYRFLTNGPS--SSPGQERELFQ 301
Query: 442 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGC 501
+E+L ++ E+ M++AVL GNI+ + N + + + A L+G
Sbjct: 302 ETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKRERNTDQATMPDNTAAQKLCRLLGL 361
Query: 502 SSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVG 561
+ AL T +I+ G+D + K T +QA + +ALAK Y LF W+V ++N++L+
Sbjct: 362 GVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALDRS 421
Query: 562 KQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWT 621
+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQEEY+ +G+ WT
Sbjct: 422 PRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWT 481
Query: 622 RVEFE-DNEECLNLIEK--KPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGER 678
++F D + C++LIE+ P G+L+LLDEE FPKATD +F K+ Q G + F+ R
Sbjct: 482 FLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKATDKSFVEKVAQEQGGHPKFQRPR 541
Query: 679 GR----AFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVL-QLFASKMLKPS 733
FS+ HYAG+V Y N +L KN DPL ++ LL T ++ +++
Sbjct: 542 HLRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDRLTAEIWKDVEGIVG 601
Query: 734 PKPAASSQPGALDTQ-----KQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGI 788
+ +S G + ++VG +K L +LM L NT P F+RCI PN ++ G
Sbjct: 602 LEQVSSLGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNPSFVRCIVPNHEKRAGK 661
Query: 789 YEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEK--QLSQDPLSISVA 846
E LVL Q RC GVLE +RI R G+P R+ QEF RY +L + D
Sbjct: 662 LEPRLVLDQLRCNGVLEGIRICRQGFPNRILFQEFRQRYEILTPNAIPKGFMDGKQACEK 721
Query: 847 VLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQA---IIRLQKCFRGYQARS--- 900
++Q + P +Y+VG +K++ R+G LA LE+ R + R + + +
Sbjct: 722 MIQALELDPNLYRVGQSKIFFRAGVLAQLEEERASEQTKSDYLKRANELVQWINDKQASL 781
Query: 901 RFRELCNGVITLQSFARGENTRRRHASLGKSCSAVV--PEIRDEQLR------------- 945
R+ + + ++QSF ++ K Q +
Sbjct: 782 ESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPA 841
Query: 946 ---------EIICLQSAIRGWLVRKQLKMHKLKQSNPVNAKVKR-RSGRKSSDMKDVPQE 995
L+ A + ++++ + K+ + K R ++
Sbjct: 842 GLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYL 901
Query: 996 QVQALPTALAELQRRVLKAEATLGQKEEENAALREQL-----QQYDAKWLEYEAKMKSME 1050
++ +Q ++ EA G+ + L Q + + + +
Sbjct: 902 GSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKD 961
Query: 1051 EMWQKQMASLQMSLAAARKSLAS 1073
+ +Q ++ S + +L +
Sbjct: 962 TFFAQQWTGVKSSAETYKNTLLA 984
|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
| >1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 | Back alignment and structure |
|---|
| >2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 | Back alignment and structure |
|---|
| >1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 | Back alignment and structure |
|---|
| >1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1221 | ||||
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 0.0 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 0.0 | |
| d1w7ja2 | 730 | c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick | 0.0 | |
| d1br2a2 | 710 | c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick | 0.0 | |
| d1d0xa2 | 712 | c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain | 0.0 | |
| d1lkxa_ | 684 | c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli | 0.0 |
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 746 bits (1928), Expect = 0.0
Identities = 288/775 (37%), Positives = 433/775 (55%), Gaps = 35/775 (4%)
Query: 180 GDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIY 239
D F L+ + NP E ++D+ ++YLNE SVL N++ RY+ +IY
Sbjct: 6 SDPDFQYLAVDRKKLMKEQTAAFMNPPKFEKLEDMANMTYLNEASVLYNLRSRYTSGLIY 65
Query: 240 SKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDS--PHVYAIADTAYNEMMGDGVNQSII 297
+ +G IAVNP++ +PIY + I YR K PH++++AD AY M+ D NQS +
Sbjct: 66 TYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCL 125
Query: 298 ISGESGAGKTETAKFAMQYLAALGGGSEG------------IEYEILQTNHILEAFGNAK 345
I+GESGAGKTE K + YLA + + +E +I+Q N +LEA+GNAK
Sbjct: 126 ITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAK 185
Query: 346 TSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAP 405
T+RN+NSSRFGK I IHF GKI GA I+T+LLEKSRV + ER+YHIFYQ+C+ A
Sbjct: 186 TTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAI 245
Query: 406 SFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLA 465
L + + + + CLT+D +DD + F EA DI+ KE+++ F A
Sbjct: 246 PELNDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTA 305
Query: 466 AVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKK 525
++L +G + F+ E E A L G ++ +L+ AL K++ G + + K
Sbjct: 306 SILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKG 365
Query: 526 LTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSF 585
+ Q ++S ALAK +Y +F+W+V ++NK+L+ + I +LDI GFE F NSF
Sbjct: 366 QNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRN-YYIGVLDIAGFEIFDFNSF 424
Query: 586 EQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSL 645
EQ CINY NERLQQ FN H+F LEQEEY+ +G+ W ++F + + + +KP+G+LS+
Sbjct: 425 EQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEKPMGILSI 484
Query: 646 LDEESNFPKATDLTFANKL-KQHLGSNSCF--------KGERGRAFSIRHYAGEVPYDTN 696
L+EE FPKA D +F +KL + H+G N F + F + HYAG VPY
Sbjct: 485 LEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSIT 544
Query: 697 GFLEKNRDPLQTDIIQLLSSCTCQVL-QLFASKMLKPSPKPAASSQPGALDTQKQSVGTK 755
G+LEKN+DP+ +++ LL + ++ +LF + P + + Q++
Sbjct: 545 GWLEKNKDPINENVVALLGASKEPLVAELFKA----PEEPAGGGKKKKGKSSAFQTISAV 600
Query: 756 FKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYP 815
+ L KLM L +T PHF+RCI PN + PG+ + +LVL Q +C GVLE +RI R G+P
Sbjct: 601 HRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFP 660
Query: 816 TRMRHQEFAGRYGVLLSE--KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLA 873
+R+ + EF RY +L Q D ++S +L + P Y++G TK++ ++G L
Sbjct: 661 SRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLG 720
Query: 874 ALEDRRKQVL-QAIIRLQKCFRGYQARSRFRELCN---GVITLQSFARGENTRRR 924
LE+ R + L + I Q RGY R +++L + G+ +Q R R
Sbjct: 721 NLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 775
|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1221 | |||
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 100.0 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1d0xa2 | 712 | Myosin S1, motor domain {Dictyostelium discoideum | 100.0 | |
| d1br2a2 | 710 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1lkxa_ | 684 | Myosin S1, motor domain {Dictyostelium discoideum, | 100.0 | |
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 98.08 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 98.01 | |
| d1br2a1 | 46 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 97.48 | |
| d2mysa1 | 46 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 97.24 | |
| d1kk8a1 | 48 | Myosin S1 fragment, N-terminal domain {Bay scallop | 97.1 | |
| d1w7ja1 | 58 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 95.69 | |
| d1m7ga_ | 208 | Adenosine-5'phosphosulfate kinase (APS kinase) {Fu | 93.75 | |
| d1iqpa2 | 231 | Replication factor C {Archaeon Pyrococcus furiosus | 93.07 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 91.2 | |
| d1sxjd2 | 237 | Replication factor C2 {Baker's yeast (Saccharomyce | 91.16 | |
| d1m8pa3 | 183 | ATP sulfurylase C-terminal domain {Fungus (Penicil | 90.97 | |
| d1njfa_ | 239 | delta prime subunit of DNA polymerase III, N-domai | 90.78 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 89.71 | |
| d1g6oa_ | 323 | Hexameric traffic ATPase, HP0525 {Helicobacter pyl | 88.91 | |
| d1qhxa_ | 178 | Chloramphenicol phosphotransferase {Streptomyces v | 88.15 | |
| d1khta_ | 190 | Adenylate kinase {Archaeon Methanococcus voltae [T | 87.91 | |
| d1sxjc2 | 227 | Replication factor C3 {Baker's yeast (Saccharomyce | 87.56 | |
| d2i3ba1 | 189 | Cancer-related NTPase, C1orf57 {Human (Homo sapien | 87.53 | |
| d1knqa_ | 171 | Gluconate kinase {Escherichia coli [TaxId: 562]} | 87.35 | |
| d1x6va3 | 195 | Adenosine-5'phosphosulfate kinase (APS kinase) {Hu | 87.05 | |
| d1ye8a1 | 178 | Hypothetical kinase-like protein Aq_1292 {Aquifex | 86.98 | |
| d1qf9a_ | 194 | UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 | 86.8 | |
| d1rkba_ | 173 | Adenylate kinase {Human (Homo sapiens), isoenzyme | 86.79 | |
| d1ly1a_ | 152 | Polynucleotide kinase, kinase domain {Bacteriophag | 86.04 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 86.03 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 85.9 | |
| d1a5ta2 | 207 | delta prime subunit of DNA polymerase III, N-domai | 85.56 | |
| d1rz3a_ | 198 | Hypothetical protein rbstp0775 {Bacillus stearothe | 85.28 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 85.27 | |
| d1kaga_ | 169 | Shikimate kinase (AroK) {Escherichia coli [TaxId: | 84.77 | |
| d1nksa_ | 194 | Adenylate kinase {Archaeon Sulfolobus acidocaldari | 84.64 | |
| d1xjca_ | 165 | Molybdopterin-guanine dinucleotide biosynthesis pr | 84.64 | |
| d1lvga_ | 190 | Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 | 83.9 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 83.59 | |
| d1sxjb2 | 224 | Replication factor C4 {Baker's yeast (Saccharomyce | 83.56 | |
| d1e6ca_ | 170 | Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax | 83.51 | |
| d1um8a_ | 364 | ClpX {Helicobacter pylori [TaxId: 210]} | 82.7 | |
| d1bifa1 | 213 | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata | 82.39 | |
| d1viaa_ | 161 | Shikimate kinase (AroK) {Campylobacter jejuni [Tax | 82.19 | |
| d1kkma_ | 176 | HPr kinase HprK C-terminal domain {Lactobacillus c | 82.03 | |
| d1gkya_ | 186 | Guanylate kinase {Baker's yeast (Saccharomyces cer | 81.78 | |
| d1y63a_ | 174 | Probable kinase LmjF30.1890 {Leishmania major [Tax | 81.66 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 81.47 | |
| d2bdta1 | 176 | Hypothetical protein BH3686 {Bacillus halodurans [ | 81.3 | |
| d2gnoa2 | 198 | gamma subunit of DNA polymerase III, N-domain {The | 81.07 | |
| d1lw7a2 | 192 | Transcriptional regulator NadR, ribosylnicotinamid | 81.0 | |
| d1uj2a_ | 213 | Uridine-cytidine kinase 2 {Human (Homo sapiens) [T | 80.79 | |
| d1ko7a2 | 169 | HPr kinase HprK C-terminal domain {Staphylococcus | 80.65 | |
| d1knxa2 | 177 | HPr kinase HprK C-terminal domain {Mycoplasma pneu | 80.55 | |
| d2pmka1 | 241 | Haemolysin B ATP-binding protein {Escherichia coli | 80.31 | |
| d1znwa1 | 182 | Guanylate kinase {Mycobacterium tuberculosis [TaxI | 80.13 |
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]
Probab=100.00 E-value=0 Score=1629.74 Aligned_cols=727 Identities=39% Similarity=0.632 Sum_probs=662.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCC--CCC
Q ss_conf 986579988447847701224678335799999975129510026992686079977988895789997103789--994
Q 000929 198 GELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPH 275 (1221)
Q Consensus 198 ~~~~~~np~~~~~~~Dl~~L~~LnE~svL~~L~~Ry~~~~iYT~~G~iLIaVNP~k~l~lY~~~~~~~Y~~~~~~--~PH 275 (1221)
...+++||+.+++||||+.|++|||++|||||+.||.+|+||||+|++|||||||+++|+|+++++..|+++... |||
T Consensus 26 ~~~~~~np~~~d~veDl~~L~~lnE~~vL~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~ly~~~~~~~y~~~~~~~~pPH 105 (794)
T d2mysa2 26 NKPFDMNPPKYDKIEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYNPKVVLAYRGKKRQEAPPH 105 (794)
T ss_dssp SSCCCCCCTTSSSCSBGGGCSCCCHHHHHHHHHHTTTTTCCEEECSSCEEEECCSSCCGGGCTTHHHHTTTCCTTSSCSC
T ss_pred CCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 58878998633476310078879889999999999768996245788899978998899999999999708988999980
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC------------CCHHHHHHHHHHHHHHHHC
Q ss_conf 4568999999655179753999719989973579999999998806999------------5078999851589998412
Q 000929 276 VYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGS------------EGIEYEILQTNHILEAFGN 343 (1221)
Q Consensus 276 iyaiA~~Ay~~m~~~~~nQsIiisGESGAGKTet~K~il~yLa~~~~~~------------~~ie~~il~snpILEAFGN 343 (1221)
||+||+.||+.|..+++||||||||||||||||++|++|+||+++++++ ..++++|+++|||||||||
T Consensus 106 ifaiA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il~yL~~~~~~~~~~~~~~~~~~~~~i~~~i~~~npiLEAFGN 185 (794)
T d2mysa2 106 IFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGN 185 (794)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEECTTSCHHHHHHHHHHHHHHHTCCCC-----------CCHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 89999999999987499807999717988789999999999998707787753111355567499999976269998548
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCCHHHHHHHCCCCHHHHHHCCC-CCCCCCCC
Q ss_conf 74678899886553799996699940004663211267223211788886247889960999544865399-98787774
Q 000929 344 AKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNL-KVANDYNY 422 (1221)
Q Consensus 344 AkT~~N~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEksRVv~~~~gERnfHIFYqLl~G~~~~~r~~l~L-~~~~~y~y 422 (1221)
|||++|+||||||||++|+|+.+|+|+||+|++||||||||+.|++||||||||||||+|+++++++.+.| .++.+|+|
T Consensus 186 AkT~~N~NSSRFgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g~~~~~~~~~~l~~~~~~y~y 265 (794)
T d2mysa2 186 AKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYHY 265 (794)
T ss_dssp ECCSSCSSEECSEEEEEEEECSSSSEEECCEEEECCCGGGGTCCCTTCCCBHHHHHHTTCSSHHHHHHHTCCSCGGGCGG
T ss_pred CCCCCCCCHHHHHEEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCHHHHHH
T ss_conf 75566687201110136677799978668999985378537734765441999999983999999998626898777233
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECCHHHHHHHHHHCCCC
Q ss_conf 66998543489015999999999985318895669999999999998329303540798830005848999999831999
Q 000929 423 LNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCS 502 (1221)
Q Consensus 423 L~~~~~~~~~~~dD~~~f~~l~~Al~~lG~s~~e~~~if~iLaAILhLGNi~F~~~~~~~~~~~~~~~~l~~aA~LLgv~ 502 (1221)
|+++. ..++++||+++|..++.||++|||+++++..||+|||||||||||+|...++++.+.+.+.+.++.||.||||+
T Consensus 266 l~~~~-~~~~~~~d~~~f~~~~~al~~lg~s~~e~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~~~~~~~a~LLgi~ 344 (794)
T d2mysa2 266 VSEGE-ITVPSIDDQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLMGLN 344 (794)
T ss_dssp GCSSC-CCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSCCEEESCSSHHHHHHHHHTCC
T ss_pred CCCCC-CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 17998-04699776999999999999809999999999998888751011167524774212236637999999881979
Q ss_pred HHHHHHHHHHCEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 99899856021762178705522898889998999999999767899998410111258777750378830467666787
Q 000929 503 SDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKK 582 (1221)
Q Consensus 503 ~~~L~~~Lt~r~~~~~~e~i~~~l~~~qA~~~RDaLak~LY~~LF~wiV~~IN~~L~~~~~~~~~~IgILDi~GFE~f~~ 582 (1221)
.++|..+|+++++.++++.+++++++++|.++||+|||+||++||+|||.+||..+.+.. ....+||||||||||+|+.
T Consensus 345 ~~~L~~~L~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~-~~~~~IgILDifGFE~f~~ 423 (794)
T d2mysa2 345 SAELLKALCYPRVGVGNEAVTKGETVSEVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQ-PRQYFIGVLDIAGFEIFDF 423 (794)
T ss_dssp HHHHHHHHHSCBCCCSSSCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSS-CCCEEEEEEEEECCCCCSS
T ss_pred HHHHHCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCEEEEEEECCCCCCCCC
T ss_conf 889530410568983366504638899998899989999999999999987663206677-7651789853255554456
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 98678897654579999999955345586532129711222546829899987219997542431111799986289999
Q 000929 583 NSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFAN 662 (1221)
Q Consensus 583 NsfEQLcINyaNErLQ~~f~~~iF~~eqeeY~~EgI~~~~i~f~dn~~~ldLie~kp~Gll~lLDeE~~~p~~td~tfl~ 662 (1221)
|||||||||||||+||++|++++|+.||++|.+|||+|..|+|.||..+++++..+|.|||++|||||.+|++||.+|++
T Consensus 424 NsfEQLcINyaNEkLQq~f~~~~F~~Eq~~Y~~EgI~~~~i~~~~n~~~~~~l~~kp~Gil~lLdee~~~~~~td~~f~~ 503 (794)
T d2mysa2 424 NSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILEEECMFPKATDTSFKN 503 (794)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCSTHHHHHHHHHHHSTTSHHHHHHHHTTCTTCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHH
T ss_conf 63889999999999999999999998999997548776567777987999999848532799998861476651889999
Q ss_pred HHHHHH-CCCCCCCCC------CCCCEEEEECCCCEEEECCCCCHHCCCCCHHHHHHHHHHCHHHH-HHHHHCCCCCCCC
Q ss_conf 999772-799876578------89961896027410151532101216855199999994321889-9995214479999
Q 000929 663 KLKQHL-GSNSCFKGE------RGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQV-LQLFASKMLKPSP 734 (1221)
Q Consensus 663 kl~~~~-~~~~~f~~~------~~~~F~I~HyaG~V~Y~~~gfleKNrD~l~~d~~~ll~~S~~~l-~~lF~~~~~~~~~ 734 (1221)
|+.+++ ++++.|..+ .+..|+|+||||+|+|+++||++||+|.+++++++||.+|++++ ..+|+........
T Consensus 504 kl~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~ 583 (794)
T d2mysa2 504 KLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYGGEAEG 583 (794)
T ss_dssp HHHHHHBTTBSSEECCCCC---CCCSEEEECSSCEEEECCSSHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSCC------
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEHHCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCC
T ss_conf 99987357885636887567878871689830763604412657755584437999999867988999866402443335
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCC
Q ss_conf 99888999987757652699999999999998702698247720799988988653115656320106448989763188
Q 000929 735 KPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGY 814 (1221)
Q Consensus 735 ~~~~~~~~~~~~~~~~tV~~~Fk~qL~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~iri~r~Gy 814 (1221)
.... ...........||+++|+.||+.||++|++|+||||||||||..+.|+.||..+|++||||+||||+|||++.||
T Consensus 584 ~~~~-~~~~~~~~~~~Tv~~~fr~sL~~L~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvLE~vri~r~Gy 662 (794)
T d2mysa2 584 GGGK-KGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGF 662 (794)
T ss_dssp ---------------CCSHHHHHHHHHHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHSHHHHHHHHTTSC
T ss_pred CCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCC
T ss_conf 6677-687777875240899999999999998756898688864688655876435699999998627899999996689
Q ss_pred CEECCHHHHHHHHHCCCCCCCC---CCCHHHHHHHHHHHHCCCCCCEEECCEEEEECCCHHHHHHHHHHHHH-HHHHHHH
Q ss_conf 5003456558853011232234---89948999999885057975526250322320302467665545568-8888887
Q 000929 815 PTRMRHQEFAGRYGVLLSEKQL---SQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVL-QAIIRLQ 890 (1221)
Q Consensus 815 p~R~~~~eF~~RY~~L~~~~~~---~~d~~~~~~~iL~~l~l~~~~~qiGkTKVFLr~g~la~LE~~R~~~l-~aai~IQ 890 (1221)
|+|++|.+|+.||++|++.... ..|.+..|+.||..+++++.+|++|+||||||.+.+..||..|...+ .+++.||
T Consensus 663 p~R~~~~eF~~RY~~L~~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~iGkTKVFlr~~~~~~LE~~r~~~l~~~~~~IQ 742 (794)
T d2mysa2 663 PSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTKVFFKAGLLGLLEEMRDDKLAEIITATQ 742 (794)
T ss_dssp CCEEEHHHHHHHHGGGTTTC------CCTTHHHHHHTTSSSCCSSSEEEETTEEEECTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86364999999999858342445566899999999999669781358717975986743999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH---HHCHHHHHHHHHHHHHHHHHHH
Q ss_conf 887678896855633---0003455555654999999997
Q 000929 891 KCFRGYQARSRFREL---CNGVITLQSFARGENTRRRHAS 927 (1221)
Q Consensus 891 k~~Rg~laRk~y~~l---r~aai~IQs~~Rg~~aRr~y~~ 927 (1221)
++||||++|++|+++ +.+++.||+.|||+++||.|..
T Consensus 743 ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~~~ 782 (794)
T d2mysa2 743 ARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPW 782 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 9999999999999999999999999999999999823699
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1br2a1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d2mysa1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a1 b.34.3.1 (A:29-76) Myosin S1 fragment, N-terminal domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja1 b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
| >d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} | Back information, alignment and structure |
|---|
| >d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
| >d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
| >d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
| >d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
| >d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
| >d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]} | Back information, alignment and structure |
|---|
| >d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
| >d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|