Citrus Sinensis ID: 001007

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190-

MAENKNRWNWEVSGFEPRNSSSSSLQFEREDRRPDAPVVRRYAISAASALPHSSEISKQALSTKVQRLKDEIKFVKEDYLELRQEATDLQEYSNAKIDRVTRYLGVLADKTRKLDQVALEAEARISPLINEKKRLFNDLLTAKGNIKVFCRTRPLFEDEGPSVVEFTDDCTIRVNTGDDTISNPKKDFEFDRVYGPHVGQAELFSDVQPFVQSALDGYNVSIFAYGQTHSGKTHTMEGSSHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQSLESSIELVQEKVDNPLEFSKVLKSAFQSRGNDVSKFNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDSGERITDVLHVMKSLSALGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSLGNRDTIKKWRDIANDARKELYEREKEIQDLKQEILGLRQALKEANDQCVLLYNEVQKAWKVSFTLQSDLKSENYMLADKHKIEKEQNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEALHSSEVRSTIRSEPMPAVSSVLRTTGDGMDSSAVSKKLEEELKKRDALIERLHEENEKLFDRLTEKASSVSSPQLSSPLSKGSVNVQPRDMARNDNNNKGLPVDVAPLPLSADKTEGTVALVKSSSEKIKTTPAGEYLTAALNDFNPEQYDNLAVISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFAFIRKMEPTRVMDTMLVSRVRILYIRSLLARSPELQSIMVSPVECFLEKSNTGRSRSSSRGSSPARSPVHYVDEKIQGFKINLKPEKKSKLSSVVLRMRGIDQDTWRHQVTGGKLREIQEEAKSFATGNKALAALFVHTPAGELQRQIRSWLAENFEFLSVTGDDASGGTTGQLELLSTAIMDGWMAGLGGAVPPSTDALGQLLSEYAKRVYNSQLQHLKDIAGTLATEDAEDASQVSKLRSALESVDHRRRKVLQQMRSDVALLTLEEGGSPIRNPSTAAEDARLASLISLDGILNQVKDAVRQSSVNTLSRSKKKAMLTSLDELAERMPSLLDIDHPCAQRQIADARRMVEVLQQMRSDVALLTLEEGGSPIQNPSTAAEDARLASLISLDGILNQVKVFTSL

ccccccccccccccccccccccccHHHHHccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccEEEEEEccccccccccEEEEccccEEEECccccccccccccEEccccccccccHHHHHHHHHHHHHHHHccccccEEEcccccccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEEEEEEEEcccccccccccccccccEEcccccccEEEEEEEEccHHHHHHHHHHHHHccccccccccccEEEEEEEEEEEEcccccEEEEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHcccccccEEEEEEcccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHEEccccccccccccHHHHHHHHccccccccccHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHcccHHHHHHHHHHcccccccccccccHHHHHHcccccccccccccccccccccHHHHHccccccccccccccccccHHHHHHccccccccccccccccHHHHHHHHHHHHcccHHHHHHHccccHHHHHHHHHHHHHHccccEEEcccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHcHHHHHHHHHHHHcc

*****NR************************************************************LKDEIKFVKEDYLELRQEATDLQEYSNAKIDRVTRYLGVLADKTRKLDQVALEAEARISPLINEKKRLFNDLLTAKGNIKVFCRTRPLFEDEGPSVVEFTDDCTIRVNTGDDTISNPKKDFEFDRVYGPHVGQAELFSDVQPFVQSALDGYNVSIFAYGQTHSGKTHTMEGSSHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQSLESSIELVQEKVDNPLEFSKVLKSAFQSRGNDVSKFNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGL*******ERITDVLHVMKSLSALGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSLGNRDTIKKWRDIANDARKELYEREKEIQDLKQEILGLRQALKEANDQCVLLYNEVQKAWKVSFTLQSDLK***YM***********************************************************************************************************************************************************************************************GEYLTAALNDFNPEQYDNLAVISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFAFIRKMEPTRVMDTMLVSRVRILYIRSLLARSPELQSIMVSPVECFL************************VDEKIQGFKIN**********SVVLRMRGIDQDTWRHQVTGGKLREIQEEAKSFATGNKALAALFVHTPAGELQRQIRSWLAENFEFLSVTGDDASGGTTGQLELLSTAIMDGWMAGLGGAVPPSTDALGQLLSEYAKRVYNSQLQHLKDIAGTLATEDAEDASQVSK**SA**S**HRRRKVLQQMRSDVALLT******************RLASLISLDGILNQVKD******************LTSLDELAERMPSLLDIDHPCAQRQIADARRMVEVLQ*****************************LASLISLDGILNQVKVFTSL

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

MAENKNRWNWEVSGFEPRNSSSSSLQFEREDRRPDAPVVRRYAISAASALPHSSEISxxxxxxxxxxxxxxxxxxxxxxxxxxxxATDLQEYSNAKIDRVTRYLGVLADKTRKLDQVALEAEARISPLINEKKRLFNDLLTAKGNIKVFCRTRPLFEDEGPSVVEFTDDCTIRVNTGDDTISNPKKDFEFDRVYGPHVGQAELFSDVQPFVQSALDGYNVSIFAYGQTHSGKTHTMEGSSHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQSLESSIELVQEKVDNPLEFSKVLKSAFQSRGNDVSKFNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDSGERITDVLHVMKSLSALGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSLGNRDTIKKWRDIxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCVLLYNEVQKAWKVSFTLQSDLKSENYMLADKxxxxxxxxxxxxxxxxxxxxxxxxxxxxIQQRDSTxxxxxxxxxxxxxxxxxxxxxSEVRSTIRSEPMPAVSSVLRTTGDGMDSSAVxxxxxxxxxxxxxxxxxxxxxxxxLFDRLTEKASSVSSPQLSSPLSKGSVNVQPRDMARNDNNNKGLPVDVAPLPLSADKTEGTVALVKSSSEKIKTTPAGEYLTAALNDFNPEQYDNLAVISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFAFIRKMEPTRVMDTMLVSRVRILYIRSLLARSPELQSIMVSPVECFLEKSNTGRSRSSSRGSSPARSPVHYVDEKIQGFKINLKPEKKSKLSSVVLRMRGIDQDTWRHQVTGGKLREIQEEAKSFATGNKALAALFVHTPAGELQRQIRSWLAENFEFLSVTGDDASGGTTGQLELLSTAIMDGWMAGLGGAVPPSTDALGQLLSEYAKRVYNSQLQHLKDIAGTLATEDAEDASQVSKLRSALESVDHRRRKVLQQMRSDVALLTLEEGGSPIRNPSTAAEDARLASLISLDGILNQVKDAVRQSSVNTLSRSKKKAMLTSLDELAERMPSLLDIDHPCAQRQIADARRMVEVLQQMRSDVALLTLEEGGSPIQNPSTAAEDARLASLISLDGILNQVKVFTSL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Geminivirus Rep-interacting motor protein	Acts as a mitotic kinesin, but its function is not restricted to mitosis.	confident	Q9LX99

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4ETP, chain A
Confidence level:very confident
Coverage over the Query: 118-459
View the alignment between query and template
View the model in PyMOL

Template: 3COB, chain A
Confidence level:very confident
Coverage over the Query: 143-469,488-501
View the alignment between query and template
View the model in PyMOL

Template: 2FXO, chain A
Confidence level:probable
Coverage over the Query: 488-594
View the alignment between query and template
View the model in PyMOL

Template: 3NA7, chain A
Confidence level:probable
Coverage over the Query: 541-594,625-660
View the alignment between query and template
View the model in PyMOL

Template: 1SJJ, chain A
Confidence level:probable
Coverage over the Query: 489-660
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID	Alignment Graph	Confidence Level	View Alignment and Template
Query
3vkg, chain A		probable	Alignment \| Template Structure