Citrus Sinensis ID: 001014

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190

MSYCLNHCKNLSPSSFLAQKPSFPLTRHIDFRSFLYSNKKTGSLSLRSWPPQLTRYSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETASGSSENLQSVSTSL

cccHHHHHcccccccccccccccccHHHHHHHHcccccHHHHHccccccHHHHHHHHcccccccccEECccccccccccccccccccccccccEEEEEcccccHccccccccccHHHHHHHHHHcccEEEEEcccccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccEEEcccHHHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHHHHcccccEEEccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHccccEEEEEEEEEcccccEEEEccccccccccccccccCEEcccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEcccccHHHHHHHcccccHHHHHHHHHHHccccccccccccccccccccccccCEEEEcccccccccccccccccccccHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccHHHHHHHHHHHHcccEEEEEcccccccccccccccccccccccHHHHHHHHHHccccEEEECcccccHHHcHHHHHHHccccccccccccccccECcccccHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHHHHccccEEEccccccccccCEEEccHHHHHHHHHHHHHccccccEEEccccccccEEEEEEEccccccEEEEcHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHcccCEEEEcEEEEEcccEEEEEEccccccccccHHHHcccccHHHHHHHHHccccccccccccccccccEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccEEEEECccccHHHHHHHHHHHHHcccEEEEEHHHHHHHHHccccEEEEEccccccccHHHHHHcccEEEEEEccccccccccccHHHHHHHHHccccEEEHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccccccccc

*SYCLNHCKNLSP**FLA**PSFPLTRHIDFRSFLYSNKKTGSLSLRSWPPQLTRYSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDV*****************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Carbamoyl-phosphate synthase large chain		probable	O28994
Carbamoyl-phosphate synthase large chain		probable	A0JX72
Carbamoyl-phosphate synthase large chain		probable	Q8UDE9

Prediction of Enzyme Commission Number

EC Number	Description	Confidence Level
6.-.-.-	Ligases.	probable
6.3.-.-	Forming carbon-nitrogen bonds.	probable
6.3.5.-	Carbon--nitrogen ligases with glutamine as amido-N-donor.	probable
6.3.5.5	Transferred entry: 6.3.5.5.	probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2QF7, chain A
Confidence level:very confident
Coverage over the Query: 294-517
View the alignment between query and template
View the model in PyMOL

Template: 2QF7, chain A
Confidence level:very confident
Coverage over the Query: 851-1035
View the alignment between query and template
View the model in PyMOL

Template: 1A9X, chain A
Confidence level:very confident
Coverage over the Query: 641-1037
View the alignment between query and template
View the model in PyMOL

Template: 2YVQ, chain A
Confidence level:very confident
Coverage over the Query: 1021-1154
View the alignment between query and template
View the model in PyMOL

Template: 3KEO, chain A
Confidence level:probable
Coverage over the Query: 582-605,619-739
View the alignment between query and template
View the model in PyMOL

Template: 3JZF, chain A
Confidence level:probable
Coverage over the Query: 103-201,212-222,238-253,293-447
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID	Alignment Graph	Confidence Level	View Alignment and Template
Query
1a9x, chain A		very confident	Alignment \| Template Structure