Citrus Sinensis ID: 001014

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190
MSYCLNHCKNLSPSSFLAQKPSFPLTRHIDFRSFLYSNKKTGSLSLRSWPPQLTRYSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETASGSSENLQSVSTSL
cccHHHHHcccccccccccccccccHHHHHHHHcccccHHHHHccccccHHHHHHHHcccccccccEEEccccccccccccccccccccccccEEEEEcccccHHcccccccccHHHHHHHHHHcccEEEEEcccccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccEEEcccHHHHHHHHcHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccEEEccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHccccEEEEEEEEEcccccEEEEccccccccccccccccEEEcccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEcccccHHHHHHHcccccHHHHHHHHHHHccccccccccccccccccccccccEEEEEcccccccccccccccccccccHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccHHHHHHHHHHHHcccEEEEEcccccccccccccccccccccccHHHHHHHHHHccccEEEEEcccccHHHcHHHHHHHccccccccccccccccEEcccccHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHHHHccccEEEccccccccccEEEEccHHHHHHHHHHHHHccccccEEEccccccccEEEEEEEccccccEEEEcHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEcEEEEEcccEEEEEEccccccccccHHHHcccccHHHHHHHHHccccccccccccccccccEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccEEEEEEccccHHHHHHHHHHHHHcccEEEEEHHHHHHHHHccccEEEEEccccccccHHHHHHcccEEEEEEccccccccccccHHHHHHHHHccccEEEHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccccccccc
cccHHHHHHHHHHHHHHcccHcccHHHHHHHHHccccHHHHHHHHcccHHHHHHccEEEEEcccHHHHcccccEEEcccccccccccccccccEEEEEcccccEccEccHHHHHHHHHHHHHHHcccEEEEEccccccHHHcHHHccEEEcccccHHHHHHHHHHHcccEEEccccHHHHHHHHHHHHHccHHHHcccEEccccHHHHHHHHcHHHHHHHHHHcccccccEEEEccHHHHHHHHHHcccccEEEEEcccccccccEEEccHHHHHHHHHHHHHHcccccEEEEEcccccEEEEEEEEEcccccEEEEEEEEEcccccccHHHccEEEccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEccccEEEEEEEEccccHHHHHHHHHHcccHHHHHHHHHccccHHHcEcHHHcccEcccccEcccEEEEEEEccHHHccccccEccccccccEEEEEEEccHHHHHHHHHHHccccccccccEEEEcccccHHHHHHHHHccEccHHHHHHHHHHHcEcHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcHHHccHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHccccEEEEcccEccccccccEEEEEEcccccccccccccEEEEEcccccEccEcHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccEEEEccccHHHHHHHHHHHcccEEEcccccHHHHHHHHHHHHHHHccccHHHHHHcccEEccccHHHHHHHHcHHHHHHHHHHcccccccEEEEccHHHHHHHHHHccccEEEEEcccccccccEEEccHHHHHHHHHHHHHHcccccEEEEEcccccEEEEEEEEEcccccEEEEEEEEEcccccccHHHccEEEccccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEcccEEEEEEEEccccccHHHHHHHHcccHHHHHHHHHHcccHHHHccccccccccEEEEEEEcHHHHcccccccccccccccEEEEEEEccHHHHHHHHHHHccccccccEEEEEEccHHHHccHHHHHHHHHHccEEEEEEHHHHHHHHccccccEEEcccccccccHHHHHHcccccEEEEcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcHHHHHHHHccccc
msyclnhcknlspssflaqkpsfpltrhidfrsflysnkktgslslrswppqltrysrsrvrassakidssaelsngaasskdqklgkrtdLRKILilgagpivigqacefdysgTQACKALKEEGYEVIlinsnpatimtdpgladrtyitpmtPELVEQVLEKerpdallptmggqTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTigvktppsgigntlDECISIANeigefpliirpaftlggtgggiaynKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSienvdpmgvhtgdsitvapaqtltdkeYQRLRDYSIAIIREIGvecggsnvqfavnpvdgevmviemnprvsrssalaskatgFPIAKMAAKLSVgysldqipnditkktpasfepsidyvvtkiprfafekfpgseplltTQMKSVGEAMALGRTFQESFQKALRSLEcgfsgwgcsnvkelDWDWEQLkyslrvpnpDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVsnmtkddfyevkrrgfsdkQIAFATKSTEKEVREKRlslgvipsykrvdtcaaefeantpymyssydfecesaptqKKKVLIlgggpnrigqgiefdyccchtsfslqsaGYETImmnsnpetvstdydtsdrlyfepltvedvlnvidlerpegiivqfggqtplklslpihqyldehrlpsasgdglvriwgtspdsidaAEDRERFNAIIKELSieqpkggiakSEADALAIAKEigypvvvrpsyvlggrameiVYTDETLVTYLENavevdperpvLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEqagvhsgdsacmiptktisssclDTISSWTIKLAKRLNVcglmncqyaittsgdvylleanprasrtvpfvskaigHPLAKYAALVMSGkslndlgftkevipkhvsvkeavlpfekfqgcdvllgpemrstgevmgidmSFPIAFAKAQIAagqklplsgtvflslndltkPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKmhegrphagdmvanGQIQMMVITssgdsldqidglklrrrglaykvpvITTVSGALANAEAIRSLKSNTVTMTALQDFFdvetasgssenlQSVSTSL
MSYCLNHCknlspssflaQKPSFPLTRHIDFRSFLYSnkktgslslrswppqltrysrsrvrassakidssaelsngaasskdqklgkrtDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILInsnpatimtdpGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMktigvktppsgignTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHtgdsitvapaqtltdkeyQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDitkktpasfepsIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKyslrvpnpdRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFyevkrrgfsdkqiafatkstekevrekrlslgvipsykrvdTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKelsieqpkggiAKSEADALAIakeigypvvVRPSYVLGGRAMEIVYTDETLVTYLEnavevdperpVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVetasgssenlqsvstsl
MSYCLNHCKNLSPSSFLAQKPSFPLTRHIDFRSFLYSNKKTGSLSLRSWPPQLTrysrsrvrassaKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETASGSSENLQSVSTSL
***CLNHC*******FLA**PSFPLTRHIDFRSFLYSN****************************************************DLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLE****DALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN************ATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFA**********KRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS***TVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTS***********RFNAIIKELSIE****GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDV*****************
*SYC*NHCKNLSP**************HIDFRSFLYSNKKTGSLSLRSWPPQLTRYSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECES*PTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGD*****DGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDF********************
MSYCLNHCKNLSPSSFLAQKPSFPLTRHIDFRSFLYSNKKTGSLSLRSWPPQL**********************************KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVET***************
*SYCLNHCKNLSPSSFLAQKPSFPLTRHIDFRSFLYSNKKTGSLSLRSWPPQLTRYSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETASG************
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
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MSYCLNHCKNLSPSSFLAQKPSFPLTRHIDFRSFLYSNKKTGSLSLRSWPPQLTRYSRSRVRASSAKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETASGSSENLQSVSTSL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1190 2.2.26 [Sep-21-2011]
Q8YQL21104 Carbamoyl-phosphate synth yes no 0.908 0.979 0.666 0.0
Q557561081 Carbamoyl-phosphate synth N/A no 0.903 0.994 0.673 0.0
O289941076 Carbamoyl-phosphate synth yes no 0.896 0.991 0.598 0.0
C1A4I51094 Carbamoyl-phosphate synth yes no 0.909 0.989 0.586 0.0
Q1D6Y81083 Carbamoyl-phosphate synth yes no 0.901 0.990 0.579 0.0
Q9CKV01068 Carbamoyl-phosphate synth yes no 0.890 0.992 0.589 0.0
P381001073 Carbamoyl-phosphate synth yes no 0.890 0.987 0.576 0.0
P589421080 Carbamoyl-phosphate synth yes no 0.884 0.974 0.584 0.0
P589431080 Carbamoyl-phosphate synth yes no 0.877 0.966 0.587 0.0
Q87WP41073 Carbamoyl-phosphate synth yes no 0.890 0.987 0.578 0.0
>sp|Q8YQL2|CARB_NOSS1 Carbamoyl-phosphate synthase large chain OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=carB PE=3 SV=1 Back     alignment and function desciption
 Score = 1529 bits (3959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 733/1100 (66%), Positives = 897/1100 (81%), Gaps = 19/1100 (1%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            +R D++KIL+LG+GPIVIGQACEFDYSGTQACKAL+EEGYEV+L+NSNPATIMTDP  AD
Sbjct: 3    RRQDIQKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
            RTYI P+TPELVE+V+ +ERPDALLPTMGGQTALN+AVALA++G L++Y VELIGAKL A
Sbjct: 63   RTYIEPLTPELVEKVIARERPDALLPTMGGQTALNIAVALAKNGVLDQYNVELIGAKLPA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I+KAEDR LF +AM  IGVK  PSG  ++LDE  +IA  IG +PLIIRPAFT+GGTGGGI
Sbjct: 123  IEKAEDRKLFNEAMDKIGVKVCPSGTASSLDESKAIARRIGTYPLIIRPAFTMGGTGGGI 182

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE + + G+ AS  SQ+L+++SLLGWKEYELEVMRDLADNVVIICSIEN+DPMG
Sbjct: 183  AYNQEEFEEMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENIDPMG 242

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQRLRD +I IIREIGVE GGSN+QFAVNPV+G+V+VIEMN
Sbjct: 243  IHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPVNGDVVVIEMN 302

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRF 447
            PRVSRSSAL+SKATGFPIAKMAAKL+VGY+LD+I NDITKKTPASFEP+IDYVVTK+PRF
Sbjct: 303  PRVSRSSALSSKATGFPIAKMAAKLAVGYTLDEIRNDITKKTPASFEPTIDYVVTKVPRF 362

Query: 448  AFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWE 507
            AFEKFPGSEP+LTTQMKSVGEAMA+GRTF ESFQKALRSLE G +GWGC   ++L    E
Sbjct: 363  AFEKFPGSEPVLTTQMKSVGEAMAIGRTFNESFQKALRSLETGRAGWGCDKAEKLP-SGE 421

Query: 508  QLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVS 567
            Q++  LR PNPDR+ A+  A++ GM  +EI+EL+ ID WFL + ++L++VE+FL    + 
Sbjct: 422  QIRAQLRTPNPDRIFAVRHALQLGMSPEEIYELTAIDPWFLDKMQQLLEVEKFLKRTPLK 481

Query: 568  NMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPY 627
             +T++  Y VKR G+SD+QIAFATK+TE EVR  R  LGV P YK VDTCAAEFEA TPY
Sbjct: 482  QLTREQMYAVKRDGYSDRQIAFATKTTEDEVRAYRKELGVTPVYKTVDTCAAEFEAFTPY 541

Query: 628  MYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNP 687
             YS+Y+ E E  P  K KV+ILGGGPNRIGQGIEFDYCCCH +++L+ AGYETIM+NSNP
Sbjct: 542  YYSTYEEETEVIPASKPKVMILGGGPNRIGQGIEFDYCCCHAAYALKGAGYETIMVNSNP 601

Query: 688  ETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRL 747
            ETVSTDYDTSDRLYFEPLT EDVLN+I+ E P GIIVQFGGQTPLKL+LP+  YL +   
Sbjct: 602  ETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIVQFGGQTPLKLALPLQDYLRQVGN 661

Query: 748  PS-ASGDG------------LVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKS 794
             S   G+G            + +IWGTSPDSID+AEDRERF  I+++L+I QP  GIA+S
Sbjct: 662  GSLVIGNGNEETAITDDQLPITKIWGTSPDSIDSAEDRERFEKILQKLNISQPPNGIARS 721

Query: 795  EADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLS 854
              DAL +AK IGYPVVVRPSYVLGGRAMEIVY+D  L  Y+  AV+V+PE P+LIDK+L 
Sbjct: 722  YEDALIVAKRIGYPVVVRPSYVLGGRAMEIVYSDTELERYMTFAVQVEPEHPILIDKFLE 781

Query: 855  DAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKL 914
            +AIE+DVDA+AD  G VVIGGIMEHIEQAG+HSGDSAC +P+ ++  + L+ I +WT++L
Sbjct: 782  NAIEVDVDAIADHTGRVVIGGIMEHIEQAGIHSGDSACSLPSISLPPAVLNQIRTWTVQL 841

Query: 915  AKRLNVCGLMNCQYAI----TTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSG 970
            A+ L+V GLMN Q+A+    + S  VY+LEANPRASRTVPFVSKA G PLAK A+L+MSG
Sbjct: 842  AQELSVVGLMNIQFAVIGASSYSPQVYILEANPRASRTVPFVSKATGVPLAKLASLIMSG 901

Query: 971  KSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKA 1030
            K+L +L FT+EVIP H++VKEAVLPF KF G D +LGPEMRSTGEVMGID  F  AFAKA
Sbjct: 902  KTLEELNFTQEVIPSHIAVKEAVLPFNKFPGTDTILGPEMRSTGEVMGIDSDFGRAFAKA 961

Query: 1031 QIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERV 1090
            ++ AG++LPL+GTVF+S++D  K     + + F+D+GFK+++T GT   L   G+ VE V
Sbjct: 962  ELGAGERLPLTGTVFVSMSDRDKSAAVPVVREFIDLGFKVMATFGTRRVLLENGLNVELV 1021

Query: 1091 LKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALAN 1150
            LK+HEGRPH  D + N +IQ+++ T SG+   Q D   +RR GLAYK+P+ITT++GA A 
Sbjct: 1022 LKLHEGRPHVIDAIKNQKIQLIINTPSGEEA-QTDARLIRRTGLAYKIPIITTIAGAKAT 1080

Query: 1151 AEAIRSLKSNTVTMTALQDF 1170
              AIRS+++ T+ +  +Q++
Sbjct: 1081 VAAIRSMQNTTLDVKTIQEY 1100

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)
EC: 6EC: .EC: 3EC: .EC: 5EC: .EC: 5
>sp|Q55756|CARB_SYNY3 Carbamoyl-phosphate synthase large chain OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=carB PE=3 SV=2 Back     alignment and function description
>sp|O28994|CARB_ARCFU Carbamoyl-phosphate synthase large chain OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=carB PE=3 SV=1 Back     alignment and function description
>sp|C1A4I5|CARB_GEMAT Carbamoyl-phosphate synthase large chain OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=carB PE=3 SV=1 Back     alignment and function description
>sp|Q1D6Y8|CARB_MYXXD Carbamoyl-phosphate synthase large chain OS=Myxococcus xanthus (strain DK 1622) GN=carB PE=3 SV=1 Back     alignment and function description
>sp|Q9CKV0|CARB_PASMU Carbamoyl-phosphate synthase large chain OS=Pasteurella multocida (strain Pm70) GN=carB PE=3 SV=1 Back     alignment and function description
>sp|P38100|CARB_PSEAE Carbamoyl-phosphate synthase large chain OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=carB PE=3 SV=3 Back     alignment and function description
>sp|P58942|CARB_XANAC Carbamoyl-phosphate synthase large chain OS=Xanthomonas axonopodis pv. citri (strain 306) GN=carB PE=3 SV=1 Back     alignment and function description
>sp|P58943|CARB_XANCP Carbamoyl-phosphate synthase large chain OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568) GN=carB PE=3 SV=1 Back     alignment and function description
>sp|Q87WP4|CARB_PSESM Carbamoyl-phosphate synthase large chain OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=carB PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1190
2555707731197 ATP binding protein, putative [Ricinus c 0.997 0.991 0.827 0.0
225435213 1349 PREDICTED: carbamoyl-phosphate synthase 0.987 0.871 0.836 0.0
4494440041192 PREDICTED: carbamoyl-phosphate synthase 0.996 0.994 0.833 0.0
1477817171204 hypothetical protein VITISV_017584 [Viti 0.989 0.977 0.821 0.0
215357911203 putative carbamoyl phosphate synthase la 0.994 0.983 0.812 0.0
183972831187 carbamoyl phosphate synthetase B [Arabid 0.980 0.983 0.820 0.0
2978459121183 hypothetical protein ARALYDRAFT_473200 [ 0.917 0.923 0.869 0.0
3565471981164 PREDICTED: carbamoyl-phosphate synthase 0.973 0.994 0.813 0.0
3565574831161 PREDICTED: carbamoyl-phosphate synthase 0.940 0.963 0.837 0.0
2241073611179 predicted protein [Populus trichocarpa] 0.925 0.933 0.862 0.0
>gi|255570773|ref|XP_002526339.1| ATP binding protein, putative [Ricinus communis] gi|223534298|gb|EEF36010.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 2063 bits (5344), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 991/1197 (82%), Positives = 1084/1197 (90%), Gaps = 10/1197 (0%)

Query: 1    MSYCLNHCKNLSPSSFLAQK-PSFP-LTRHIDFRSFLYSNKKTGSLSLRSWPPQ-----L 53
            M+ CLNHC+ LS +S    K P+ P L+R   F  F Y N    SL+L  WPP+     L
Sbjct: 1    MATCLNHCETLSSTSIFPNKSPTLPRLSRRRSFGLFSYKNYNFSSLNLHPWPPRRTTRHL 60

Query: 54   TRYSRSRVRASSAKIDSSAELSNGAASSKDQ--KLGKRTDLRKILILGAGPIVIGQACEF 111
             R S + VR SS  +  S+ +S+    +  +   +GKRTD++KI+ILGAGPIVIGQACEF
Sbjct: 61   KRCSSNSVRCSSNSVRCSS-ISDVTVKTLTEAPNVGKRTDIKKIMILGAGPIVIGQACEF 119

Query: 112  DYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDAL 171
            DYSGTQACKALKEEGY+VILINSNPATIMTDP LADRTYI PMTPELVEQV+EKERPDAL
Sbjct: 120  DYSGTQACKALKEEGYDVILINSNPATIMTDPDLADRTYIAPMTPELVEQVIEKERPDAL 179

Query: 172  LPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPS 231
            LPTMGGQTALNLAVALAE G L+KY VELIGAKLDAIKKAEDRDLFKQAMK IG+KTPPS
Sbjct: 180  LPTMGGQTALNLAVALAERGTLDKYNVELIGAKLDAIKKAEDRDLFKQAMKNIGLKTPPS 239

Query: 232  GIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVL 291
            GIG T+DEC  IAN+IGEFPLIIRPAFTLGGTGGGIAYN EEFE ICK GLA SLTSQVL
Sbjct: 240  GIGTTIDECFQIANDIGEFPLIIRPAFTLGGTGGGIAYNIEEFEGICKGGLAESLTSQVL 299

Query: 292  VEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLR 351
            VEKSLLGWKEYELEVMRDLADNVVIICSIEN DPMGVHTGDSITVAPAQTLTDKEYQRLR
Sbjct: 300  VEKSLLGWKEYELEVMRDLADNVVIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQRLR 359

Query: 352  DYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAK 411
            DYSI IIREIGVECGGSNVQFAVNPVDGEVM+IEMNPRVSRSSALASKATGFPIAKMAAK
Sbjct: 360  DYSIKIIREIGVECGGSNVQFAVNPVDGEVMIIEMNPRVSRSSALASKATGFPIAKMAAK 419

Query: 412  LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMA 471
            LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGS+P+LTT+M+SVGEAM+
Sbjct: 420  LSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSQPILTTRMQSVGEAMS 479

Query: 472  LGRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKG 531
            +GRTFQESFQK +RSLE G+SGWGC+ VKELDWDW+QLKY+LRVPNPDR+ A+YAAMKKG
Sbjct: 480  IGRTFQESFQKGVRSLESGYSGWGCAKVKELDWDWDQLKYNLRVPNPDRIYAVYAAMKKG 539

Query: 532  MKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFAT 591
            MKVDEIHELS IDKWFL Q KEL+DVEQ+L+T+S+++M KDDFYE+K+RGFSDKQIAFAT
Sbjct: 540  MKVDEIHELSLIDKWFLNQLKELVDVEQYLMTRSLADMIKDDFYEIKKRGFSDKQIAFAT 599

Query: 592  KSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGG 651
            KSTEKEVR KRLS GV P+YKRVDTCAAEFEANTPYMYSSYD ECESAPT KKKVLILGG
Sbjct: 600  KSTEKEVRSKRLSFGVTPAYKRVDTCAAEFEANTPYMYSSYDAECESAPTNKKKVLILGG 659

Query: 652  GPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVL 711
            GPNRIGQGIEFDYCCCHTSF+LQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDV+
Sbjct: 660  GPNRIGQGIEFDYCCCHTSFALQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVV 719

Query: 712  NVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAED 771
            NVIDLERP+GIIVQFGGQTPLKL+LPI QYLDEH+  SASG G VRIWGTSPDSIDAAED
Sbjct: 720  NVIDLERPDGIIVQFGGQTPLKLALPIQQYLDEHKPVSASGAGHVRIWGTSPDSIDAAED 779

Query: 772  RERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETL 831
            RERFNAI+KEL IEQPKGGIAK+EADAL IAK+IGYPVVVRPSYVLGGRAMEIVY+DE L
Sbjct: 780  RERFNAIVKELQIEQPKGGIAKTEADALTIAKDIGYPVVVRPSYVLGGRAMEIVYSDEKL 839

Query: 832  VTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSA 891
            VTYLENAV+VDP+RPVLIDKYLSDA+EIDVDALADS GNVVIGG+MEHIEQAGVHSGDSA
Sbjct: 840  VTYLENAVKVDPDRPVLIDKYLSDAVEIDVDALADSHGNVVIGGVMEHIEQAGVHSGDSA 899

Query: 892  CMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPF 951
            C++PT+TISSSCLDTI SWT+KLAK L VCGLMNCQYAIT +G+V+LLEANPRASRTVPF
Sbjct: 900  CILPTQTISSSCLDTIRSWTMKLAKSLKVCGLMNCQYAITLAGEVFLLEANPRASRTVPF 959

Query: 952  VSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMR 1011
            VSKAIGHPLAKYA+LVMSG SLN+LGFTKEVIP HV+VKE VLPF KF GCDV+LGPEMR
Sbjct: 960  VSKAIGHPLAKYASLVMSGISLNELGFTKEVIPAHVAVKEVVLPFNKFPGCDVMLGPEMR 1019

Query: 1012 STGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIV 1071
            STGE MGID + PIA+AK QIA GQKLPLSGT F+SLNDLTKPHLE++A AFL++GF+I+
Sbjct: 1020 STGEGMGIDFALPIAYAKGQIATGQKLPLSGTAFISLNDLTKPHLEKLANAFLELGFRII 1079

Query: 1072 STSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRR 1131
            STSGTAHFLELKGI VERVLKMHEGRPHAGDM+ANGQIQ+MV+TSSGDSLDQIDGL+LRR
Sbjct: 1080 STSGTAHFLELKGIPVERVLKMHEGRPHAGDMLANGQIQLMVMTSSGDSLDQIDGLQLRR 1139

Query: 1132 RGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETASGSSENLQSVST 1188
              LAYKVP+ITTV+GALA AEAI+SL+S  + M ALQDFFDVE    SS++LQS S+
Sbjct: 1140 MALAYKVPIITTVAGALATAEAIKSLRSCPIDMIALQDFFDVEIREESSKHLQSASS 1196

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225435213|ref|XP_002282042.1| PREDICTED: carbamoyl-phosphate synthase large chain-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449444004|ref|XP_004139765.1| PREDICTED: carbamoyl-phosphate synthase large chain-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147781717|emb|CAN69740.1| hypothetical protein VITISV_017584 [Vitis vinifera] Back     alignment and taxonomy information
>gi|21535791|emb|CAC85727.1| putative carbamoyl phosphate synthase large subunit [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|18397283|ref|NP_564338.1| carbamoyl phosphate synthetase B [Arabidopsis thaliana] gi|9972356|gb|AAG10606.1|AC008030_6 carbamoyl phosphate synthetase large chain (carB) [Arabidopsis thaliana] gi|14194125|gb|AAK56257.1|AF367268_1 At1g29900/F1N18_6 [Arabidopsis thaliana] gi|1477480|gb|AAB67843.1| carbamoyl phosphate synthetase large chain [Arabidopsis thaliana] gi|22137066|gb|AAM91378.1| At1g29900/F1N18_6 [Arabidopsis thaliana] gi|332193027|gb|AEE31148.1| carbamoyl phosphate synthetase B [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297845912|ref|XP_002890837.1| hypothetical protein ARALYDRAFT_473200 [Arabidopsis lyrata subsp. lyrata] gi|297336679|gb|EFH67096.1| hypothetical protein ARALYDRAFT_473200 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356547198|ref|XP_003542003.1| PREDICTED: carbamoyl-phosphate synthase large chain-like [Glycine max] Back     alignment and taxonomy information
>gi|356557483|ref|XP_003547045.1| PREDICTED: carbamoyl-phosphate synthase large chain-like [Glycine max] Back     alignment and taxonomy information
>gi|224107361|ref|XP_002314458.1| predicted protein [Populus trichocarpa] gi|222863498|gb|EEF00629.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1190
TAIR|locus:20193021187 CARB "carbamoyl phosphate synt 0.981 0.983 0.819 0.0
TIGR_CMR|GSU_12761081 GSU_1276 "carbamoyl-phosphate 0.894 0.985 0.611 0.0
TIGR_CMR|CBU_12811073 CBU_1281 "carbamoyl-phosphate 0.892 0.989 0.556 0.0
UNIPROTKB|P009681073 carB [Escherichia coli K-12 (t 0.881 0.977 0.581 0.0
TIGR_CMR|SO_11421074 SO_1142 "carbamoyl-phosphate s 0.881 0.976 0.572 0.0
UNIPROTKB|Q9KPH91076 carB "Carbamoyl-phosphate synt 0.876 0.969 0.570 2.60000020455e-317
TIGR_CMR|VC_23891076 VC_2389 "carbamoyl-phosphate s 0.876 0.969 0.570 2.60000020455e-317
TIGR_CMR|CPS_34581071 CPS_3458 "carbamoyl-phosphate 0.888 0.986 0.559 5.49999999906e-315
UNIPROTKB|P576891115 carB "Carbamoyl-phosphate synt 0.831 0.886 0.549 1.4e-311
TIGR_CMR|SPO_09231122 SPO_0923 "carbamoyl-phosphate 0.734 0.778 0.578 1.9e-309
TAIR|locus:2019302 CARB "carbamoyl phosphate synthetase B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 4972 (1755.3 bits), Expect = 0., P = 0.
 Identities = 971/1185 (81%), Positives = 1056/1185 (89%)

Query:     6 NHCKNLSP--SSFLAQKPSFP------LTRHIDF-RSFLYSNKK----TGSLSLRSWPPQ 52
             NHC  LS   SS  A   S P      L+    F RS +Y   K    + S S  ++PP 
Sbjct:     3 NHCLELSSNCSSIFASSKSNPRFSPSKLSYSTFFSRSAIYYRSKPKQASSSSSFSTFPPC 62

Query:    53 LTXXXXXXXXXXXXKIDSSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFD 112
             L              +   A+ +    S   + +GKRTDL+KI+ILGAGPIVIGQACEFD
Sbjct:    63 LNRKSSLTHVLK--PVSELADTTTKPFSP--EIVGKRTDLKKIMILGAGPIVIGQACEFD 118

Query:   113 YSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALL 172
             YSGTQACKAL+EEGYEVILINSNPATIMTDP  A+RTYI PMTPELVEQV+EKERPDALL
Sbjct:   119 YSGTQACKALREEGYEVILINSNPATIMTDPETANRTYIAPMTPELVEQVIEKERPDALL 178

Query:   173 PTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSG 232
             PTMGGQTALNLAVALAESGALEKYGVELIGAKL AIKKAEDR+LFK AMK IG+KTPPSG
Sbjct:   179 PTMGGQTALNLAVALAESGALEKYGVELIGAKLGAIKKAEDRELFKDAMKNIGLKTPPSG 238

Query:   233 IGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLV 292
             IG TLDEC  IA +IGEFPLIIRPAFTLGGTGGGIAYNKEEFE+ICK+GLAAS TSQVLV
Sbjct:   239 IGTTLDECFDIAEKIGEFPLIIRPAFTLGGTGGGIAYNKEEFESICKSGLAASATSQVLV 298

Query:   293 EKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRD 352
             EKSLLGWKEYELEVMRDLADNVVIICSIEN+DPMGVHTGDSITVAPAQTLTD+EYQRLRD
Sbjct:   299 EKSLLGWKEYELEVMRDLADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDREYQRLRD 358

Query:   353 YSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKL 412
             YSIAIIREIGVECGGSNVQFAVNPVDGEVM+IEMNPRVSRSSALASKATGFPIAKMAAKL
Sbjct:   359 YSIAIIREIGVECGGSNVQFAVNPVDGEVMIIEMNPRVSRSSALASKATGFPIAKMAAKL 418

Query:   413 SVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMAL 472
             SVGY+LDQIPNDIT+KTPASFEPSIDYVVTKIPRFAFEKFPGS+PLLTTQMKSVGE+MAL
Sbjct:   419 SVGYTLDQIPNDITRKTPASFEPSIDYVVTKIPRFAFEKFPGSQPLLTTQMKSVGESMAL 478

Query:   473 GRTFQESFQKALRSLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGM 532
             GRTFQESFQKALRSLECGFSGWGC+ +KELDWDW+QLKYSLRVPNPDR+ AIYAAMKKGM
Sbjct:   479 GRTFQESFQKALRSLECGFSGWGCAKIKELDWDWDQLKYSLRVPNPDRIHAIYAAMKKGM 538

Query:   533 KVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATK 592
             K+DEI+ELS +DKWFLTQ KEL+DVEQ+L++ ++S +TK+D YEVK+RGFSDKQIAFATK
Sbjct:   539 KIDEIYELSMVDKWFLTQLKELVDVEQYLMSGTLSEITKEDLYEVKKRGFSDKQIAFATK 598

Query:   593 STEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGG 652
             +TE+EVR KR+SLGV+PSYKRVDTCAAEFEA+TPYMYSSYD ECESAP  KKKVLILGGG
Sbjct:   599 TTEEEVRTKRISLGVVPSYKRVDTCAAEFEAHTPYMYSSYDVECESAPNNKKKVLILGGG 658

Query:   653 PNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLN 712
             PNRIGQGIEFDYCCCHTSF+LQ AGYETIM+NSNPETVSTDYDTSDRLYFEPLT+EDVLN
Sbjct:   659 PNRIGQGIEFDYCCCHTSFALQDAGYETIMLNSNPETVSTDYDTSDRLYFEPLTIEDVLN 718

Query:   713 VIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDR 772
             VIDLE+P+GIIVQFGGQTPLKL+LPI  YLD+H   S SG G VRIWGTSPDSIDAAEDR
Sbjct:   719 VIDLEKPDGIIVQFGGQTPLKLALPIKHYLDKHMPMSLSGAGPVRIWGTSPDSIDAAEDR 778

Query:   773 ERFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLV 832
             ERFNAI+ EL IEQPKGGIAKSEADALAIAKE+GYPVVVRPSYVLGGRAMEIVY D  L+
Sbjct:   779 ERFNAILDELKIEQPKGGIAKSEADALAIAKEVGYPVVVRPSYVLGGRAMEIVYDDSRLI 838

Query:   833 TYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSAC 892
             TYLENAV+VDPERPVL+DKYLSDAIEIDVD L DS GNVVIGGIMEHIEQAGVHSGDSAC
Sbjct:   839 TYLENAVQVDPERPVLVDKYLSDAIEIDVDTLTDSYGNVVIGGIMEHIEQAGVHSGDSAC 898

Query:   893 MIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFV 952
             M+PT+TI +SCL TI +WT KLAK+LNVCGLMNCQYAITTSGDV+LLEANPRASRTVPFV
Sbjct:   899 MLPTQTIPASCLQTIRTWTTKLAKKLNVCGLMNCQYAITTSGDVFLLEANPRASRTVPFV 958

Query:   953 SKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRS 1012
             SKAIGHPLAKYAALVMSGKSL DL F KEVIPKHVSVKEAV PFEKFQGCDV+LGPEMRS
Sbjct:   959 SKAIGHPLAKYAALVMSGKSLKDLNFEKEVIPKHVSVKEAVFPFEKFQGCDVILGPEMRS 1018

Query:  1013 TGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVS 1072
             TGEVM I   F  AFA AQIAAGQKLPLSGTVFLSLND+TKPHLE+IA +FL++GFKIV+
Sbjct:  1019 TGEVMSISSEFSSAFAMAQIAAGQKLPLSGTVFLSLNDMTKPHLEKIAVSFLELGFKIVA 1078

Query:  1073 TSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRR 1132
             TSGTAHFLELKGI VERVLK+HEGRPHA DMVANGQI +M+ITSSGD+LDQ DG +LR+ 
Sbjct:  1079 TSGTAHFLELKGIPVERVLKLHEGRPHAADMVANGQIHLMLITSSGDALDQKDGRQLRQM 1138

Query:  1133 GLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFDVETAS 1177
              LAYKVPVITTV+GALA AE I+SLKS+ + MTALQDFF+V+  S
Sbjct:  1139 ALAYKVPVITTVAGALATAEGIKSLKSSAIKMTALQDFFEVKNVS 1183
GO:0003824 "catalytic activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0006807 "nitrogen compound metabolic process" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0016874 "ligase activity" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0016036 "cellular response to phosphate starvation" evidence=IEP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0006526 "arginine biosynthetic process" evidence=NAS
GO:0016020 "membrane" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0004088 "carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity" evidence=IDA
GO:0005951 "carbamoyl-phosphate synthase complex" evidence=IDA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0006342 "chromatin silencing" evidence=RCA
GO:0007010 "cytoskeleton organization" evidence=RCA
GO:0010498 "proteasomal protein catabolic process" evidence=RCA
GO:0051567 "histone H3-K9 methylation" evidence=RCA
TIGR_CMR|GSU_1276 GSU_1276 "carbamoyl-phosphate synthase, large subunit" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_1281 CBU_1281 "carbamoyl-phosphate synthase, large subunit" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|P00968 carB [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|SO_1142 SO_1142 "carbamoyl-phosphate synthase, large subunit" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KPH9 carB "Carbamoyl-phosphate synthase large chain" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2389 VC_2389 "carbamoyl-phosphate synthase, large subunit" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_3458 CPS_3458 "carbamoyl-phosphate synthase, large subunit" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|P57689 carB "Carbamoyl-phosphate synthase large chain" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_0923 SPO_0923 "carbamoyl-phosphate synthase, large subunit" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9WZ27CARB_THEMA6, ., 3, ., 5, ., 50.53500.88060.9535yesno
O28994CARB_ARCFU6, ., 3, ., 5, ., 50.59810.89660.9916yesno
A0JX72CARB_ARTS26, ., 3, ., 5, ., 50.53920.89150.9654yesno
Q8K9Z7CARB_BUCAP6, ., 3, ., 5, ., 50.55640.88150.9740yesno
Q8Z9L7CARB_SALTI6, ., 3, ., 5, ., 50.57230.88990.9851N/Ano
Q8UDE9CARB_AGRT56, ., 3, ., 5, ., 50.53900.89660.9182yesno
Q8RSS3CARB_HALER6, ., 3, ., 5, ., 50.56660.89410.9888N/Ano
P63738CARB_SHIFL6, ., 3, ., 5, ., 50.57600.88400.9804yesno
C1F1S6CARB_ACIC56, ., 3, ., 5, ., 50.56710.86210.9387yesno
Q88DU6CARB_PSEPK6, ., 3, ., 5, ., 50.57750.88990.9869yesno
P00968CARB_ECOLI6, ., 3, ., 5, ., 50.57790.88400.9804N/Ano
P63737CARB_ECO576, ., 3, ., 5, ., 50.57600.88400.9804N/Ano
Q9PEC1CARB_XYLFA6, ., 3, ., 5, ., 50.57200.87980.9694yesno
Q8ZIL4CARB_YERPE6, ., 3, ., 5, ., 50.56820.88900.9823yesno
C1A4I5CARB_GEMAT6, ., 3, ., 5, ., 50.58640.90920.9890yesno
Q8FZJ3CARB_BRUSU6, ., 3, ., 5, ., 50.53180.89490.9165yesno
Q9KPH9CARB_VIBCH6, ., 3, ., 5, ., 50.56980.87470.9674yesno
Q9JW02CARB_NEIMA6, ., 3, ., 5, ., 50.58220.88060.9785yesno
P57244CARB_BUCAI6, ., 3, ., 5, ., 50.56390.88060.9712yesno
Q87SF3CARB_VIBPA6, ., 3, ., 5, ., 50.57550.87640.9684yesno
Q8DEM2CARB_VIBVU6, ., 3, ., 5, ., 50.57840.87640.9684yesno
Q9CKV0CARB_PASMU6, ., 3, ., 5, ., 50.58940.89070.9925yesno
Q8XZ83CARB_RALSO6, ., 3, ., 5, ., 50.57140.88480.9740yesno
Q7VP67CARB_HAEDU6, ., 3, ., 5, ., 50.56450.89070.9860yesno
A5IJL8CARB_THEP16, ., 3, ., 5, ., 50.53230.88060.9535yesno
Q87WP4CARB_PSESM6, ., 3, ., 5, ., 50.57810.89070.9878yesno
Q1IPK2CARB_KORVE6, ., 3, ., 5, ., 50.56650.88570.9564yesno
Q8YQL2CARB_NOSS16, ., 3, ., 5, ., 50.66630.90840.9791yesno
Q8YIC2CARB_BRUME6, ., 3, ., 5, ., 50.53270.89490.9165yesno
A1R6Z3CARB_ARTAT6, ., 3, ., 5, ., 50.53920.89150.9627yesno
Q8F832CARB_LEPIN6, ., 3, ., 5, ., 50.57010.89150.9593yesno
Q8FLB0CARB_ECOL66, ., 3, ., 5, ., 50.57740.88310.9794yesno
Q9JXW8CARB_NEIMB6, ., 3, ., 5, ., 50.58220.88060.9785yesno
Q59599CARB_NEIGO6, ., 3, ., 5, ., 50.56260.88060.9785yesno
P58942CARB_XANAC6, ., 3, ., 5, ., 50.58430.88400.9740yesno
P58943CARB_XANCP6, ., 3, ., 5, ., 50.58730.87730.9666yesno
P14846CARB_SALTY6, ., 3, ., 5, ., 50.57230.88990.9851yesno
Q7UJ58CARB_RHOBA6, ., 3, ., 5, ., 50.57690.89320.9815yesno
Q7MNU0CARB_VIBVY6, ., 3, ., 5, ., 50.57840.87640.9684yesno
Q9A4D6CARB_CAUCR6, ., 3, ., 5, ., 50.57050.87220.9444yesno
Q1D6Y8CARB_MYXXD6, ., 3, ., 5, ., 50.57920.90160.9907yesno
Q55756CARB_SYNY36, ., 3, ., 5, ., 50.67340.90330.9944N/Ano
P59448CARB_BUCBP6, ., 3, ., 5, ., 50.52790.88310.9767yesno
B8H8U5CARB_ARTCA6, ., 3, ., 5, ., 50.54200.89150.9567yesno
A0B8K9CARB_METTP6, ., 3, ., 5, ., 50.52490.89240.9888yesno
P38100CARB_PSEAE6, ., 3, ., 5, ., 50.57620.89070.9878yesno
B1L8T8CARB_THESQ6, ., 3, ., 5, ., 50.53590.88060.9535yesno
Q72NF1CARB_LEPIC6, ., 3, ., 5, ., 50.57010.89150.9593yesno
Q87EB8CARB_XYLFT6, ., 3, ., 5, ., 50.57390.87980.9694yesno
B9KB91CARB_THENN6, ., 3, ., 5, ., 50.53320.88060.9535yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.3.50.976
3rd Layer6.3.5.50.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
CARB
CARB (CARBAMOYL PHOSPHATE SYNTHETASE B); ATP binding / carbamoyl-phosphate synthase/ catalytic; carbamoyl phosphate synthetase large chain (CARB) mRNA, (1187 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
CARA
CARA (CARBAMOYL PHOSPHATE SYNTHETASE A); carbamoyl-phosphate synthase (glutamine-hydrolyzing)/ [...] (430 aa)
••••••• 0.999
PYRB
aspartate carabmoyltransferase, chloroplast / aspartate transcarbamylase / ATCase (PYRB); encod [...] (390 aa)
•• • •• 0.999
OTC
OTC (ORNITHINE CARBAMOYLTRANSFERASE); amino acid binding / carboxyl- or carbamoyltransferase/ o [...] (375 aa)
•• • •• 0.998
AT4G24830
arginosuccinate synthase family; arginosuccinate synthase family; FUNCTIONS IN- argininosuccina [...] (494 aa)
•• •  • 0.996
AT5G10920
argininosuccinate lyase, putative / arginosuccinase, putative; argininosuccinate lyase, putativ [...] (517 aa)
•  • •• 0.992
ATASE3
ATASE3 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 3); amidophosphoribosyltransferase; G [...] (532 aa)
•  • •• 0.977
ATASE2
ATASE2 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2); amidophosphoribosyltransferase; E [...] (561 aa)
•  • •• 0.976
ATASE1
ATASE1 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 1); amidophosphoribosyltransferase; A [...] (566 aa)
•  • •• 0.975
PYRD
PYRD (pyrimidine d); dihydroorotate dehydrogenase; dihydroorotate dehydrogenase, catalyses four [...] (460 aa)
•  • •• 0.971
AT1G63660
GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; GMP synt [...] (534 aa)
•  •  • 0.946

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1190
PLN027351102 PLN02735, PLN02735, carbamoyl-phosphate synthase 0.0
PRK052941066 PRK05294, carB, carbamoyl phosphate synthase large 0.0
TIGR013691050 TIGR01369, CPSaseII_lrg, carbamoyl-phosphate synth 0.0
PRK128151068 PRK12815, carB, carbamoyl phosphate synthase large 0.0
COG0458400 COG0458, CarB, Carbamoylphosphate synthase large s 0.0
pfam02786211 pfam02786, CPSase_L_D2, Carbamoyl-phosphate syntha 5e-85
COG0458400 COG0458, CarB, Carbamoylphosphate synthase large s 2e-72
smart01096124 smart01096, CPSase_L_D3, Carbamoyl-phosphate synth 4e-59
pfam02787122 pfam02787, CPSase_L_D3, Carbamoyl-phosphate synthe 7e-55
cd01424110 cd01424, MGS_CPS_II, Methylglyoxal synthase-like d 8e-39
pfam02786211 pfam02786, CPSase_L_D2, Carbamoyl-phosphate syntha 2e-36
pfam00289108 pfam00289, CPSase_L_chain, Carbamoyl-phosphate syn 2e-24
pfam0214292 pfam02142, MGS, MGS-like domain 6e-23
smart0085191 smart00851, MGS, MGS-like domain 2e-20
COG0439449 COG0439, AccC, Biotin carboxylase [Lipid metabolis 1e-19
pfam00289108 pfam00289, CPSase_L_chain, Carbamoyl-phosphate syn 4e-18
PRK12767326 PRK12767, PRK12767, carbamoyl phosphate synthase-l 3e-17
COG10381149 COG1038, PycA, Pyruvate carboxylase [Energy produc 4e-17
pfam13535183 pfam13535, ATP-grasp_4, ATP-grasp domain 2e-16
PRK08654499 PRK08654, PRK08654, pyruvate carboxylase subunit A 6e-15
COG0439449 COG0439, AccC, Biotin carboxylase [Lipid metabolis 9e-15
PRK07178472 PRK07178, PRK07178, pyruvate carboxylase subunit A 1e-14
TIGR00514449 TIGR00514, accC, acetyl-CoA carboxylase, biotin ca 2e-14
TIGR012351143 TIGR01235, pyruv_carbox, pyruvate carboxylase 4e-13
PRK129991146 PRK12999, PRK12999, pyruvate carboxylase; Reviewed 5e-13
pfam13535183 pfam13535, ATP-grasp_4, ATP-grasp domain 1e-12
COG4770645 COG4770, COG4770, Acetyl/propionyl-CoA carboxylase 2e-12
TIGR01205315 TIGR01205, D_ala_D_alaTIGR, D-alanine--D-alanine l 3e-12
PRK05586447 PRK05586, PRK05586, biotin carboxylase; Validated 1e-11
PRK08654499 PRK08654, PRK08654, pyruvate carboxylase subunit A 2e-11
cd00532112 cd00532, MGS-like, MGS-like domain 2e-11
PRK08591451 PRK08591, PRK08591, acetyl-CoA carboxylase biotin 7e-11
TIGR00514449 TIGR00514, accC, acetyl-CoA carboxylase, biotin ca 8e-11
PRK12767326 PRK12767, PRK12767, carbamoyl phosphate synthase-l 3e-10
TIGR01235 1143 TIGR01235, pyruv_carbox, pyruvate carboxylase 3e-10
PRK08462445 PRK08462, PRK08462, biotin carboxylase; Validated 5e-10
PRK08591451 PRK08591, PRK08591, acetyl-CoA carboxylase biotin 1e-09
PRK06111450 PRK06111, PRK06111, acetyl-CoA carboxylase biotin 1e-09
COG1038 1149 COG1038, PycA, Pyruvate carboxylase [Energy produc 2e-09
COG4770 645 COG4770, COG4770, Acetyl/propionyl-CoA carboxylase 5e-09
TIGR01142380 TIGR01142, purT, phosphoribosylglycinamide formylt 5e-09
PRK06111450 PRK06111, PRK06111, acetyl-CoA carboxylase biotin 2e-08
COG0027394 COG0027, PurT, Formate-dependent phosphoribosylgly 2e-08
PRK12999 1146 PRK12999, PRK12999, pyruvate carboxylase; Reviewed 8e-08
PRK12833467 PRK12833, PRK12833, acetyl-CoA carboxylase biotin 2e-07
PRK14016727 PRK14016, PRK14016, cyanophycin synthetase; Provis 2e-07
PRK01372304 PRK01372, ddl, D-alanine--D-alanine ligase; Review 3e-07
PRK09288395 PRK09288, purT, phosphoribosylglycinamide formyltr 1e-06
PRK08462445 PRK08462, PRK08462, biotin carboxylase; Validated 2e-06
TIGR02068 864 TIGR02068, cya_phycin_syn, cyanophycin synthetase 5e-06
PRK08463478 PRK08463, PRK08463, acetyl-CoA carboxylase subunit 7e-06
cd01423116 cd01423, MGS_CPS_I_III, Methylglyoxal synthase-lik 2e-05
pfam07478201 pfam07478, Dala_Dala_lig_C, D-ala D-ala ligase C-t 2e-05
PRK05586447 PRK05586, PRK05586, biotin carboxylase; Validated 4e-05
PRK01372304 PRK01372, ddl, D-alanine--D-alanine ligase; Review 5e-05
TIGR02144280 TIGR02144, LysX_arch, Lysine biosynthesis enzyme L 5e-05
TIGR00768277 TIGR00768, rimK_fam, alpha-L-glutamate ligases, Ri 1e-04
COG0026375 COG0026, PurK, Phosphoribosylaminoimidazole carbox 1e-04
TIGR02068864 TIGR02068, cya_phycin_syn, cyanophycin synthetase 2e-04
pfam08442202 pfam08442, ATP-grasp_2, ATP-grasp domain 3e-04
TIGR01016386 TIGR01016, sucCoAbeta, succinyl-CoA synthetase, be 4e-04
TIGR01161352 TIGR01161, purK, phosphoribosylaminoimidazole carb 6e-04
TIGR01205315 TIGR01205, D_ala_D_alaTIGR, D-alanine--D-alanine l 0.001
TIGR02712 1201 TIGR02712, urea_carbox, urea carboxylase 0.002
COG1181317 COG1181, DdlA, D-alanine-D-alanine ligase and rela 0.002
PRK14573809 PRK14573, PRK14573, bifunctional D-alanyl-alanine 0.002
PRK14016727 PRK14016, PRK14016, cyanophycin synthetase; Provis 0.004
PLN02891 547 PLN02891, PLN02891, IMP cyclohydrolase 0.004
pfam02222171 pfam02222, ATP-grasp, ATP-grasp domain 0.004
>gnl|CDD|215391 PLN02735, PLN02735, carbamoyl-phosphate synthase Back     alignment and domain information 
 Score = 2298 bits (5957), Expect = 0.0
 Identities = 960/1102 (87%), Positives = 1023/1102 (92%)

Query: 70   SSAELSNGAASSKDQKLGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEV 129
            SS   +   A S   K GKRTDL+KI+ILGAGPIVIGQACEFDYSGTQACKALKEEGYEV
Sbjct: 1    SSLADTVTRAWSAATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGYEV 60

Query: 130  ILINSNPATIMTDPGLADRTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAE 189
            +LINSNPATIMTDP  ADRTYI PMTPELVEQV+ KERPDALLPTMGGQTALNLAVALAE
Sbjct: 61   VLINSNPATIMTDPETADRTYIAPMTPELVEQVIAKERPDALLPTMGGQTALNLAVALAE 120

Query: 190  SGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGE 249
            SG LEKYGVELIGAKLDAIKKAEDR+LFKQAM+ IG+KTPPSGI  TLDEC  IA +IGE
Sbjct: 121  SGILEKYGVELIGAKLDAIKKAEDRELFKQAMEKIGLKTPPSGIATTLDECFEIAEDIGE 180

Query: 250  FPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRD 309
            FPLIIRPAFTLGGTGGGIAYNKEEFE ICKAGLAAS+TSQVLVEKSLLGWKEYELEVMRD
Sbjct: 181  FPLIIRPAFTLGGTGGGIAYNKEEFETICKAGLAASITSQVLVEKSLLGWKEYELEVMRD 240

Query: 310  LADNVVIICSIENVDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSN 369
            LADNVVIICSIEN+DPMGVHTGDSITVAPAQTLTDKEYQRLRDYS+AIIREIGVECGGSN
Sbjct: 241  LADNVVIICSIENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSVAIIREIGVECGGSN 300

Query: 370  VQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDITKKT 429
            VQFAVNPVDGEVM+IEMNPRVSRSSALASKATGFPIAKMAAKLSVGY+LDQIPNDIT KT
Sbjct: 301  VQFAVNPVDGEVMIIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYTLDQIPNDITLKT 360

Query: 430  PASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLEC 489
            PASFEPSIDYVVTKIPRFAFEKFPGS+P+LTTQMKSVGEAMALGRTFQESFQKALRSLE 
Sbjct: 361  PASFEPSIDYVVTKIPRFAFEKFPGSQPILTTQMKSVGEAMALGRTFQESFQKALRSLET 420

Query: 490  GFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLT 549
            GFSGWGC+ VKELDWDWEQLKY LRVPNPDR+ AIYAAMKKGM VDEIHEL+FID WFLT
Sbjct: 421  GFSGWGCAKVKELDWDWEQLKYKLRVPNPDRIHAIYAAMKKGMTVDEIHELTFIDPWFLT 480

Query: 550  QFKELIDVEQFLLTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIP 609
            Q KEL+DVEQFL ++S+S ++KDDFYEVKRRGFSDKQIAFATKSTEKEVR KRLSLGV P
Sbjct: 481  QLKELVDVEQFLKSRSLSELSKDDFYEVKRRGFSDKQIAFATKSTEKEVRSKRLSLGVTP 540

Query: 610  SYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKKVLILGGGPNRIGQGIEFDYCCCHT 669
            SYKRVDTCAAEFEANTPYMYSSYD ECESAPT KKKVLILGGGPNRIGQGIEFDYCCCH 
Sbjct: 541  SYKRVDTCAAEFEANTPYMYSSYDGECESAPTNKKKVLILGGGPNRIGQGIEFDYCCCHA 600

Query: 670  SFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQ 729
            SF+LQ AGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERP+GIIVQFGGQ
Sbjct: 601  SFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPDGIIVQFGGQ 660

Query: 730  TPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKG 789
            TPLKL+LPI +YLD++  PSASG+G V+IWGTSPDSIDAAEDRERFNAI+ EL IEQPKG
Sbjct: 661  TPLKLALPIQKYLDKNPPPSASGNGNVKIWGTSPDSIDAAEDRERFNAILNELKIEQPKG 720

Query: 790  GIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLI 849
            GIA+SEADALAIAK IGYPVVVRPSYVLGGRAMEIVY+D+ L TYLE AVEVDPERPVL+
Sbjct: 721  GIARSEADALAIAKRIGYPVVVRPSYVLGGRAMEIVYSDDKLKTYLETAVEVDPERPVLV 780

Query: 850  DKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISS 909
            DKYLSDA EIDVDALADS GNVVIGGIMEHIEQAGVHSGDSAC +PT+TI SSCL TI  
Sbjct: 781  DKYLSDATEIDVDALADSEGNVVIGGIMEHIEQAGVHSGDSACSLPTQTIPSSCLATIRD 840

Query: 910  WTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMS 969
            WT KLAKRLNVCGLMNCQYAIT SG+VY++EANPRASRTVPFVSKAIGHPLAKYA+LVMS
Sbjct: 841  WTTKLAKRLNVCGLMNCQYAITPSGEVYIIEANPRASRTVPFVSKAIGHPLAKYASLVMS 900

Query: 970  GKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAK 1029
            GKSL DLGFT+EVIP HVSVKEAVLPF+KFQGCDVLLGPEMRSTGEVMGID  F  AFAK
Sbjct: 901  GKSLKDLGFTEEVIPAHVSVKEAVLPFDKFQGCDVLLGPEMRSTGEVMGIDYEFSKAFAK 960

Query: 1030 AQIAAGQKLPLSGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVER 1089
            AQIAAGQ+LPLSGTVF+SLNDLTKPHL  IA+ FL++GF+IVSTSGTAHFLEL GI VER
Sbjct: 961  AQIAAGQRLPLSGTVFISLNDLTKPHLVPIARGFLELGFRIVSTSGTAHFLELAGIPVER 1020

Query: 1090 VLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALA 1149
            VLK+HEGRPHAGDM+ANGQIQ+MVITSSGD+LDQ DG +LRR  LAYKVP+ITTV+GALA
Sbjct: 1021 VLKLHEGRPHAGDMLANGQIQLMVITSSGDALDQKDGRQLRRMALAYKVPIITTVAGALA 1080

Query: 1150 NAEAIRSLKSNTVTMTALQDFF 1171
             A+A++SLK   + M ALQDFF
Sbjct: 1081 TAQAVKSLKECPIEMIALQDFF 1102

Length = 1102
>gnl|CDD|235393 PRK05294, carB, carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>gnl|CDD|233379 TIGR01369, CPSaseII_lrg, carbamoyl-phosphate synthase, large subunit Back     alignment and domain information
>gnl|CDD|237215 PRK12815, carB, carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>gnl|CDD|223534 COG0458, CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|190425 pfam02786, CPSase_L_D2, Carbamoyl-phosphate synthase L chain, ATP binding domain Back     alignment and domain information
>gnl|CDD|223534 COG0458, CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|198164 smart01096, CPSase_L_D3, Carbamoyl-phosphate synthetase large chain, oligomerisation domain Back     alignment and domain information
>gnl|CDD|217231 pfam02787, CPSase_L_D3, Carbamoyl-phosphate synthetase large chain, oligomerisation domain Back     alignment and domain information
>gnl|CDD|238712 cd01424, MGS_CPS_II, Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP) Back     alignment and domain information
>gnl|CDD|190425 pfam02786, CPSase_L_D2, Carbamoyl-phosphate synthase L chain, ATP binding domain Back     alignment and domain information
>gnl|CDD|201133 pfam00289, CPSase_L_chain, Carbamoyl-phosphate synthase L chain, N-terminal domain Back     alignment and domain information
>gnl|CDD|216899 pfam02142, MGS, MGS-like domain Back     alignment and domain information
>gnl|CDD|214855 smart00851, MGS, MGS-like domain Back     alignment and domain information
>gnl|CDD|223516 COG0439, AccC, Biotin carboxylase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|201133 pfam00289, CPSase_L_chain, Carbamoyl-phosphate synthase L chain, N-terminal domain Back     alignment and domain information
>gnl|CDD|237195 PRK12767, PRK12767, carbamoyl phosphate synthase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|223968 COG1038, PycA, Pyruvate carboxylase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|222206 pfam13535, ATP-grasp_4, ATP-grasp domain Back     alignment and domain information
>gnl|CDD|236325 PRK08654, PRK08654, pyruvate carboxylase subunit A; Validated Back     alignment and domain information
>gnl|CDD|223516 COG0439, AccC, Biotin carboxylase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|180865 PRK07178, PRK07178, pyruvate carboxylase subunit A; Validated Back     alignment and domain information
>gnl|CDD|129605 TIGR00514, accC, acetyl-CoA carboxylase, biotin carboxylase subunit Back     alignment and domain information
>gnl|CDD|130302 TIGR01235, pyruv_carbox, pyruvate carboxylase Back     alignment and domain information
>gnl|CDD|237263 PRK12999, PRK12999, pyruvate carboxylase; Reviewed Back     alignment and domain information
>gnl|CDD|222206 pfam13535, ATP-grasp_4, ATP-grasp domain Back     alignment and domain information
>gnl|CDD|227111 COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|233310 TIGR01205, D_ala_D_alaTIGR, D-alanine--D-alanine ligase Back     alignment and domain information
>gnl|CDD|180150 PRK05586, PRK05586, biotin carboxylase; Validated Back     alignment and domain information
>gnl|CDD|236325 PRK08654, PRK08654, pyruvate carboxylase subunit A; Validated Back     alignment and domain information
>gnl|CDD|238297 cd00532, MGS-like, MGS-like domain Back     alignment and domain information
>gnl|CDD|236307 PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated Back     alignment and domain information
>gnl|CDD|129605 TIGR00514, accC, acetyl-CoA carboxylase, biotin carboxylase subunit Back     alignment and domain information
>gnl|CDD|237195 PRK12767, PRK12767, carbamoyl phosphate synthase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|130302 TIGR01235, pyruv_carbox, pyruvate carboxylase Back     alignment and domain information
>gnl|CDD|236269 PRK08462, PRK08462, biotin carboxylase; Validated Back     alignment and domain information
>gnl|CDD|236307 PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated Back     alignment and domain information
>gnl|CDD|180406 PRK06111, PRK06111, acetyl-CoA carboxylase biotin carboxylase subunit; Validated Back     alignment and domain information
>gnl|CDD|223968 COG1038, PycA, Pyruvate carboxylase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|227111 COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|130212 TIGR01142, purT, phosphoribosylglycinamide formyltransferase 2 Back     alignment and domain information
>gnl|CDD|180406 PRK06111, PRK06111, acetyl-CoA carboxylase biotin carboxylase subunit; Validated Back     alignment and domain information
>gnl|CDD|223106 COG0027, PurT, Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|237263 PRK12999, PRK12999, pyruvate carboxylase; Reviewed Back     alignment and domain information
>gnl|CDD|183781 PRK12833, PRK12833, acetyl-CoA carboxylase biotin carboxylase subunit; Provisional Back     alignment and domain information
>gnl|CDD|237586 PRK14016, PRK14016, cyanophycin synthetase; Provisional Back     alignment and domain information
>gnl|CDD|234948 PRK01372, ddl, D-alanine--D-alanine ligase; Reviewed Back     alignment and domain information
>gnl|CDD|236454 PRK09288, purT, phosphoribosylglycinamide formyltransferase 2; Validated Back     alignment and domain information
>gnl|CDD|236269 PRK08462, PRK08462, biotin carboxylase; Validated Back     alignment and domain information
>gnl|CDD|233705 TIGR02068, cya_phycin_syn, cyanophycin synthetase Back     alignment and domain information
>gnl|CDD|169452 PRK08463, PRK08463, acetyl-CoA carboxylase subunit A; Validated Back     alignment and domain information
>gnl|CDD|238711 cd01423, MGS_CPS_I_III, Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III Back     alignment and domain information
>gnl|CDD|203643 pfam07478, Dala_Dala_lig_C, D-ala D-ala ligase C-terminus Back     alignment and domain information
>gnl|CDD|180150 PRK05586, PRK05586, biotin carboxylase; Validated Back     alignment and domain information
>gnl|CDD|234948 PRK01372, ddl, D-alanine--D-alanine ligase; Reviewed Back     alignment and domain information
>gnl|CDD|131199 TIGR02144, LysX_arch, Lysine biosynthesis enzyme LysX Back     alignment and domain information
>gnl|CDD|233121 TIGR00768, rimK_fam, alpha-L-glutamate ligases, RimK family Back     alignment and domain information
>gnl|CDD|223105 COG0026, PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|233705 TIGR02068, cya_phycin_syn, cyanophycin synthetase Back     alignment and domain information
>gnl|CDD|219843 pfam08442, ATP-grasp_2, ATP-grasp domain Back     alignment and domain information
>gnl|CDD|233234 TIGR01016, sucCoAbeta, succinyl-CoA synthetase, beta subunit Back     alignment and domain information
>gnl|CDD|233295 TIGR01161, purK, phosphoribosylaminoimidazole carboxylase, PurK protein Back     alignment and domain information
>gnl|CDD|233310 TIGR01205, D_ala_D_alaTIGR, D-alanine--D-alanine ligase Back     alignment and domain information
>gnl|CDD|233980 TIGR02712, urea_carbox, urea carboxylase Back     alignment and domain information
>gnl|CDD|224102 COG1181, DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|184752 PRK14573, PRK14573, bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase; Provisional Back     alignment and domain information
>gnl|CDD|237586 PRK14016, PRK14016, cyanophycin synthetase; Provisional Back     alignment and domain information
>gnl|CDD|178479 PLN02891, PLN02891, IMP cyclohydrolase Back     alignment and domain information
>gnl|CDD|216935 pfam02222, ATP-grasp, ATP-grasp domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1190
PLN027351102 carbamoyl-phosphate synthase 100.0
PRK128151068 carB carbamoyl phosphate synthase large subunit; R 100.0
TIGR013691050 CPSaseII_lrg carbamoyl-phosphate synthase, large s 100.0
PRK052941066 carB carbamoyl phosphate synthase large subunit; R 100.0
KOG03701435 consensus Multifunctional pyrimidine synthesis pro 100.0
COG0458400 CarB Carbamoylphosphate synthase large subunit (sp 100.0
PLN02735 1102 carbamoyl-phosphate synthase 100.0
COG0458400 CarB Carbamoylphosphate synthase large subunit (sp 100.0
PRK12815 1068 carB carbamoyl phosphate synthase large subunit; R 100.0
PRK052941066 carB carbamoyl phosphate synthase large subunit; R 100.0
TIGR013691050 CPSaseII_lrg carbamoyl-phosphate synthase, large s 100.0
KOG0370 1435 consensus Multifunctional pyrimidine synthesis pro 100.0
PRK08654499 pyruvate carboxylase subunit A; Validated 100.0
COG4770645 Acetyl/propionyl-CoA carboxylase, alpha subunit [L 100.0
TIGR00514449 accC acetyl-CoA carboxylase, biotin carboxylase su 100.0
PRK07178472 pyruvate carboxylase subunit A; Validated 100.0
PRK12833467 acetyl-CoA carboxylase biotin carboxylase subunit; 100.0
PRK05586447 biotin carboxylase; Validated 100.0
PRK08463478 acetyl-CoA carboxylase subunit A; Validated 100.0
PRK08462445 biotin carboxylase; Validated 100.0
PRK08591451 acetyl-CoA carboxylase biotin carboxylase subunit; 100.0
KOG0238670 consensus 3-Methylcrotonyl-CoA carboxylase, biotin 100.0
COG10381149 PycA Pyruvate carboxylase [Energy production and c 100.0
COG0439449 AccC Biotin carboxylase [Lipid metabolism] 100.0
PRK129991146 pyruvate carboxylase; Reviewed 100.0
TIGR012351143 pyruv_carbox pyruvate carboxylase. This enzyme pla 100.0
PRK06111450 acetyl-CoA carboxylase biotin carboxylase subunit; 100.0
PRK06019372 phosphoribosylaminoimidazole carboxylase ATPase su 100.0
COG4770 645 Acetyl/propionyl-CoA carboxylase, alpha subunit [L 100.0
COG0026375 PurK Phosphoribosylaminoimidazole carboxylase (NCA 100.0
PRK07178472 pyruvate carboxylase subunit A; Validated 100.0
PRK08654499 pyruvate carboxylase subunit A; Validated 100.0
TIGR00514449 accC acetyl-CoA carboxylase, biotin carboxylase su 100.0
PLN02948577 phosphoribosylaminoimidazole carboxylase 100.0
PRK06019372 phosphoribosylaminoimidazole carboxylase ATPase su 100.0
PRK05586447 biotin carboxylase; Validated 100.0
PRK08463478 acetyl-CoA carboxylase subunit A; Validated 100.0
TIGR027121201 urea_carbox urea carboxylase. Members of this fami 100.0
PRK12833467 acetyl-CoA carboxylase biotin carboxylase subunit; 100.0
KOG03691176 consensus Pyruvate carboxylase [Energy production 100.0
PRK08591451 acetyl-CoA carboxylase biotin carboxylase subunit; 100.0
TIGR01142380 purT phosphoribosylglycinamide formyltransferase 2 100.0
PF02787123 CPSase_L_D3: Carbamoyl-phosphate synthetase large 100.0
PLN02948577 phosphoribosylaminoimidazole carboxylase 100.0
KOG0238 670 consensus 3-Methylcrotonyl-CoA carboxylase, biotin 100.0
PRK08462445 biotin carboxylase; Validated 100.0
COG1038 1149 PycA Pyruvate carboxylase [Energy production and c 100.0
TIGR01161352 purK phosphoribosylaminoimidazole carboxylase, Pur 100.0
TIGR01142380 purT phosphoribosylglycinamide formyltransferase 2 100.0
PRK09288395 purT phosphoribosylglycinamide formyltransferase 2 100.0
PRK06111450 acetyl-CoA carboxylase biotin carboxylase subunit; 100.0
PRK09288395 purT phosphoribosylglycinamide formyltransferase 2 100.0
TIGR01161352 purK phosphoribosylaminoimidazole carboxylase, Pur 100.0
COG0027394 PurT Formate-dependent phosphoribosylglycinamide f 100.0
COG0439449 AccC Biotin carboxylase [Lipid metabolism] 100.0
KOG0369 1176 consensus Pyruvate carboxylase [Energy production 100.0
TIGR01235 1143 pyruv_carbox pyruvate carboxylase. This enzyme pla 100.0
COG0026375 PurK Phosphoribosylaminoimidazole carboxylase (NCA 100.0
PRK06395435 phosphoribosylamine--glycine ligase; Provisional 100.0
PRK12999 1146 pyruvate carboxylase; Reviewed 100.0
TIGR02712 1201 urea_carbox urea carboxylase. Members of this fami 100.0
PRK06395435 phosphoribosylamine--glycine ligase; Provisional 100.0
PRK13789426 phosphoribosylamine--glycine ligase; Provisional 100.0
PRK00885420 phosphoribosylamine--glycine ligase; Provisional 100.0
COG0027394 PurT Formate-dependent phosphoribosylglycinamide f 100.0
PF02786211 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, 100.0
TIGR00877423 purD phosphoribosylamine--glycine ligase. This enz 100.0
PRK07206416 hypothetical protein; Provisional 100.0
PRK13789426 phosphoribosylamine--glycine ligase; Provisional 100.0
PRK05784486 phosphoribosylamine--glycine ligase; Provisional 100.0
PF02786211 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, 100.0
PRK05784486 phosphoribosylamine--glycine ligase; Provisional 100.0
PLN02257434 phosphoribosylamine--glycine ligase 100.0
PRK00885420 phosphoribosylamine--glycine ligase; Provisional 100.0
TIGR00877423 purD phosphoribosylamine--glycine ligase. This enz 100.0
PRK02186887 argininosuccinate lyase; Provisional 100.0
PRK14569296 D-alanyl-alanine synthetase A; Provisional 100.0
PRK12767326 carbamoyl phosphate synthase-like protein; Provisi 100.0
COG0151428 PurD Phosphoribosylamine-glycine ligase [Nucleotid 100.0
PRK01966333 ddl D-alanyl-alanine synthetase A; Reviewed 100.0
COG0151428 PurD Phosphoribosylamine-glycine ligase [Nucleotid 100.0
PRK13790379 phosphoribosylamine--glycine ligase; Provisional 100.0
PLN02257434 phosphoribosylamine--glycine ligase 100.0
PRK12767326 carbamoyl phosphate synthase-like protein; Provisi 100.0
PRK14572347 D-alanyl-alanine synthetase A; Provisional 100.0
PRK01372304 ddl D-alanine--D-alanine ligase; Reviewed 100.0
TIGR01205315 D_ala_D_alaTIGR D-alanine--D-alanine ligase. but a 100.0
PRK14568343 vanB D-alanine--D-lactate ligase; Provisional 100.0
PRK07206416 hypothetical protein; Provisional 100.0
PRK14570364 D-alanyl-alanine synthetase A; Provisional 100.0
PRK13790379 phosphoribosylamine--glycine ligase; Provisional 100.0
PRK14571299 D-alanyl-alanine synthetase A; Provisional 99.98
PRK02186 887 argininosuccinate lyase; Provisional 99.97
PRK14569296 D-alanyl-alanine synthetase A; Provisional 99.97
PF15632329 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathwa 99.97
KOG0368 2196 consensus Acetyl-CoA carboxylase [Lipid transport 99.97
PRK14573809 bifunctional D-alanyl-alanine synthetase A/UDP-N-a 99.97
PF15632329 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathwa 99.97
TIGR01205315 D_ala_D_alaTIGR D-alanine--D-alanine ligase. but a 99.97
PRK01372304 ddl D-alanine--D-alanine ligase; Reviewed 99.96
PRK06849389 hypothetical protein; Provisional 99.96
PRK01966333 ddl D-alanyl-alanine synthetase A; Reviewed 99.96
PRK06849389 hypothetical protein; Provisional 99.96
PRK14568343 vanB D-alanine--D-lactate ligase; Provisional 99.96
PRK14572347 D-alanyl-alanine synthetase A; Provisional 99.96
PRK14570364 D-alanyl-alanine synthetase A; Provisional 99.95
PRK06524493 biotin carboxylase-like protein; Validated 99.95
PRK14571299 D-alanyl-alanine synthetase A; Provisional 99.95
KOG0368 2196 consensus Acetyl-CoA carboxylase [Lipid transport 99.95
PRK14573809 bifunctional D-alanyl-alanine synthetase A/UDP-N-a 99.95
PRK06524493 biotin carboxylase-like protein; Validated 99.95
KOG0237788 consensus Glycinamide ribonucleotide synthetase (G 99.94
PF02222172 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 T 99.93
COG1181317 DdlA D-alanine-D-alanine ligase and related ATP-gr 99.92
PRK10446300 ribosomal protein S6 modification protein; Provisi 99.92
PF13535184 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 99.92
PF13535184 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 99.91
PRK13278358 purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D 99.91
TIGR00768277 rimK_fam alpha-L-glutamate ligases, RimK family. T 99.91
COG2232389 Predicted ATP-dependent carboligase related to bio 99.9
COG2232389 Predicted ATP-dependent carboligase related to bio 99.9
PRK10446300 ribosomal protein S6 modification protein; Provisi 99.9
TIGR00768277 rimK_fam alpha-L-glutamate ligases, RimK family. T 99.9
PRK13278358 purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D 99.9
KOG0237 788 consensus Glycinamide ribonucleotide synthetase (G 99.89
TIGR02144280 LysX_arch Lysine biosynthesis enzyme LysX. The fam 99.89
PF02222172 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 T 99.89
PRK13277366 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribo 99.89
PRK13277366 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribo 99.89
TIGR02144280 LysX_arch Lysine biosynthesis enzyme LysX. The fam 99.88
PF07478203 Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; In 99.87
PF07478203 Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; In 99.87
), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF01071">PF01071194 GARS_A: Phosphoribosylglycinamide synthetase, ATP- 99.85
cd01424110 MGS_CPS_II Methylglyoxal synthase-like domain from 99.85
cd00532112 MGS-like MGS-like domain. This domain composes the 99.85
), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF01071">PF01071194 GARS_A: Phosphoribosylglycinamide synthetase, ATP- 99.84
COG1181317 DdlA D-alanine-D-alanine ligase and related ATP-gr 99.84
cd01423116 MGS_CPS_I_III Methylglyoxal synthase-like domain f 99.83
PRK05234142 mgsA methylglyoxal synthase; Validated 99.83
cd01422115 MGS Methylglyoxal synthase catalyzes the enolizati 99.81
COG3919415 Predicted ATP-grasp enzyme [General function predi 99.81
PF02655161 ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 99.8
COG3919415 Predicted ATP-grasp enzyme [General function predi 99.79
PF02655161 ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 99.79
COG0189318 RimK Glutathione synthase/Ribosomal protein S6 mod 99.77
COG0189318 RimK Glutathione synthase/Ribosomal protein S6 mod 99.76
PF08443190 RimK: RimK-like ATP-grasp domain; InterPro: IPR013 99.73
PF08443190 RimK: RimK-like ATP-grasp domain; InterPro: IPR013 99.72
TIGR03103547 trio_acet_GNAT GNAT-family acetyltransferase TIGR0 99.7
smart0085190 MGS MGS-like domain. This domain composes the whol 99.7
PRK12458338 glutathione synthetase; Provisional 99.69
PRK14016727 cyanophycin synthetase; Provisional 99.67
PF0214295 MGS: MGS-like domain This is a subfamily of this f 99.67
TIGR03103547 trio_acet_GNAT GNAT-family acetyltransferase TIGR0 99.66
PRK14016727 cyanophycin synthetase; Provisional 99.64
PLN02941328 inositol-tetrakisphosphate 1-kinase 99.61
COG1821307 Predicted ATP-utilizing enzyme (ATP-grasp superfam 99.61
PRK02471752 bifunctional glutamate--cysteine ligase/glutathion 99.61
COG1821307 Predicted ATP-utilizing enzyme (ATP-grasp superfam 99.61
PRK12458338 glutathione synthetase; Provisional 99.61
PRK02471752 bifunctional glutamate--cysteine ligase/glutathion 99.59
TIGR01380312 glut_syn glutathione synthetase, prokaryotic. This 99.59
TIGR01435737 glu_cys_lig_rel glutamate--cysteine ligase/gamma-g 99.58
TIGR01435737 glu_cys_lig_rel glutamate--cysteine ligase/gamma-g 99.56
PLN02941328 inositol-tetrakisphosphate 1-kinase 99.55
PRK05246316 glutathione synthetase; Provisional 99.55
TIGR02068864 cya_phycin_syn cyanophycin synthetase. Cyanophycin 99.52
TIGR01380312 glut_syn glutathione synthetase, prokaryotic. This 99.51
TIGR02068 864 cya_phycin_syn cyanophycin synthetase. Cyanophycin 99.49
PRK05246316 glutathione synthetase; Provisional 99.48
TIGR02291317 rimK_rel_E_lig alpha-L-glutamate ligase-related pr 99.43
COG1759361 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofu 99.43
COG1759361 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofu 99.41
PF00289110 CPSase_L_chain: Carbamoyl-phosphate synthase L cha 99.39
TIGR02291317 rimK_rel_E_lig alpha-L-glutamate ligase-related pr 99.37
PF00289110 CPSase_L_chain: Carbamoyl-phosphate synthase L cha 99.29
PF14398262 ATPgrasp_YheCD: YheC/D like ATP-grasp 99.04
TIGR01016386 sucCoAbeta succinyl-CoA synthetase, beta subunit. 99.01
TIGR01016386 sucCoAbeta succinyl-CoA synthetase, beta subunit. 98.96
PF14397285 ATPgrasp_ST: Sugar-transfer associated ATP-grasp 98.93
PF14397285 ATPgrasp_ST: Sugar-transfer associated ATP-grasp 98.93
PF14398262 ATPgrasp_YheCD: YheC/D like ATP-grasp 98.92
PRK00696388 sucC succinyl-CoA synthetase subunit beta; Provisi 98.89
PRK00696388 sucC succinyl-CoA synthetase subunit beta; Provisi 98.88
COG0045387 SucC Succinyl-CoA synthetase, beta subunit [Energy 98.55
PF08442202 ATP-grasp_2: ATP-grasp domain; InterPro: IPR013650 98.54
COG0045387 SucC Succinyl-CoA synthetase, beta subunit [Energy 98.52
PF08442202 ATP-grasp_2: ATP-grasp domain; InterPro: IPR013650 98.5
PF05770307 Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6- 98.47
PF13549222 ATP-grasp_5: ATP-grasp domain; PDB: 1WR2_A. 98.46
PRK14046392 malate--CoA ligase subunit beta; Provisional 98.43
PRK14046392 malate--CoA ligase subunit beta; Provisional 98.41
PF05770307 Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6- 98.39
), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF02844">PF02844100 GARS_N: Phosphoribosylglycinamide synthetase, N do 98.31
cd01421187 IMPCH Inosine monophosphate cyclohydrolase domain. 98.27
PLN00124422 succinyl-CoA ligase [GDP-forming] subunit beta; Pr 98.26
PLN00124422 succinyl-CoA ligase [GDP-forming] subunit beta; Pr 98.2
PF02955173 GSH-S_ATP: Prokaryotic glutathione synthetase, ATP 98.19
PF13549222 ATP-grasp_5: ATP-grasp domain; PDB: 1WR2_A. 98.16
PLN02235423 ATP citrate (pro-S)-lyase 98.15
PLN02235423 ATP citrate (pro-S)-lyase 98.13
PF02955173 GSH-S_ATP: Prokaryotic glutathione synthetase, ATP 98.09
), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF02844">PF02844100 GARS_N: Phosphoribosylglycinamide synthetase, N do 97.86
PF02750203 Synapsin_C: Synapsin, ATP binding domain; InterPro 97.68
PRK00881 513 purH bifunctional phosphoribosylaminoimidazolecarb 97.63
PF01820117 Dala_Dala_lig_N: D-ala D-ala ligase N-terminus; In 97.58
PF14305239 ATPgrasp_TupA: TupA-like ATPgrasp 97.57
PF14305239 ATPgrasp_TupA: TupA-like ATPgrasp 97.52
PLN02891 547 IMP cyclohydrolase 97.31
PF02785107 Biotin_carb_C: Biotin carboxylase C-terminal domai 97.28
PF02750203 Synapsin_C: Synapsin, ATP binding domain; InterPro 97.24
TIGR00355 511 purH phosphoribosylaminoimidazolecarboxamide formy 97.19
TIGR00160143 MGSA methylglyoxal synthase. Methylglyoxal synthas 97.17
COG1803142 MgsA Methylglyoxal synthase [Carbohydrate transpor 97.01
smart00878107 Biotin_carb_C Biotin carboxylase C-terminal domain 96.95
PF03133292 TTL: Tubulin-tyrosine ligase family; InterPro: IPR 96.88
PF06849124 DUF1246: Protein of unknown function (DUF1246); In 96.74
PF03133292 TTL: Tubulin-tyrosine ligase family; InterPro: IPR 96.73
PF06849124 DUF1246: Protein of unknown function (DUF1246); In 96.44
PF14403445 CP_ATPgrasp_2: Circularly permuted ATP-grasp type 96.37
PF06973188 DUF1297: Domain of unknown function (DUF1297); Int 96.15
COG0041162 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) m 96.13
TIGR00715256 precor6x_red precorrin-6x reductase. This enzyme w 96.12
PRK08057248 cobalt-precorrin-6x reductase; Reviewed 95.93
PF06973188 DUF1297: Domain of unknown function (DUF1297); Int 95.72
KOG3895488 consensus Synaptic vesicle protein Synapsin [Signa 95.69
KOG3895488 consensus Synaptic vesicle protein Synapsin [Signa 95.35
PF14403445 CP_ATPgrasp_2: Circularly permuted ATP-grasp type 94.99
COG0569225 TrkA K+ transport systems, NAD-binding component [ 94.97
COG1064339 AdhP Zn-dependent alcohol dehydrogenases [General 94.8
COG2099257 CobK Precorrin-6x reductase [Coenzyme metabolism] 94.52
PF14243130 DUF4343: Domain of unknown function (DUF4343) 94.42
PF14243130 DUF4343: Domain of unknown function (DUF4343) 94.28
PF02571249 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: 94.07
PF11379355 DUF3182: Protein of unknown function (DUF3182); In 94.02
KOG10571018 consensus Arp2/3 complex-interacting protein VIP1/ 93.6
PF11379355 DUF3182: Protein of unknown function (DUF3182); In 93.58
PRK03562621 glutathione-regulated potassium-efflux system prot 93.58
PRK03659601 glutathione-regulated potassium-efflux system prot 93.53
KOG2799434 consensus Succinyl-CoA synthetase, beta subunit [E 93.43
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 93.29
COG1064339 AdhP Zn-dependent alcohol dehydrogenases [General 93.2
COG0138 515 PurH AICAR transformylase/IMP cyclohydrolase PurH 93.18
COG1087329 GalE UDP-glucose 4-epimerase [Cell envelope biogen 92.91
PRK10669558 putative cation:proton antiport protein; Provision 92.61
COG0569225 TrkA K+ transport systems, NAD-binding component [ 92.36
PLN00016378 RNA-binding protein; Provisional 91.68
PF13478136 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2 91.66
TIGR00715256 precor6x_red precorrin-6x reductase. This enzyme w 91.5
PRK04148134 hypothetical protein; Provisional 91.14
PRK04148134 hypothetical protein; Provisional 91.12
PF13380116 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 90.91
COG1748389 LYS9 Saccharopine dehydrogenase and related protei 90.84
COG1748389 LYS9 Saccharopine dehydrogenase and related protei 90.74
TIGR02964246 xanthine_xdhC xanthine dehydrogenase accessory pro 90.18
PRK03659601 glutathione-regulated potassium-efflux system prot 90.05
KOG2799434 consensus Succinyl-CoA synthetase, beta subunit [E 89.91
PRK05849 783 hypothetical protein; Provisional 89.27
PRK10669558 putative cation:proton antiport protein; Provision 89.25
PF13380116 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 89.09
PLN02657390 3,8-divinyl protochlorophyllide a 8-vinyl reductas 88.7
KOG2156662 consensus Tubulin-tyrosine ligase-related protein 88.3
PLN02572442 UDP-sulfoquinovose synthase 88.16
PLN03209576 translocon at the inner envelope of chloroplast su 88.08
KOG2835373 consensus Phosphoribosylamidoimidazole-succinocarb 87.61
KOG1057 1018 consensus Arp2/3 complex-interacting protein VIP1/ 87.4
CHL00194317 ycf39 Ycf39; Provisional 87.35
PRK03562621 glutathione-regulated potassium-efflux system prot 87.34
COG2344211 AT-rich DNA-binding protein [General function pred 87.24
PRK05472213 redox-sensing transcriptional repressor Rex; Provi 86.79
KOG1447412 consensus GTP-specific succinyl-CoA synthetase, be 86.57
KOG2156662 consensus Tubulin-tyrosine ligase-related protein 86.53
PF04321286 RmlD_sub_bind: RmlD substrate binding domain; Inte 84.52
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 84.48
TIGR02964246 xanthine_xdhC xanthine dehydrogenase accessory pro 84.32
COG2910211 Putative NADH-flavin reductase [General function p 84.16
COG2099257 CobK Precorrin-6x reductase [Coenzyme metabolism] 83.99
COG1087329 GalE UDP-glucose 4-epimerase [Cell envelope biogen 83.73
PRK05849783 hypothetical protein; Provisional 83.59
PLN02695370 GDP-D-mannose-3',5'-epimerase 83.33
KOG2555 588 consensus AICAR transformylase/IMP cyclohydrolase/ 82.64
PLN028191042 lysine-ketoglutarate reductase/saccharopine dehydr 82.59
PRK08057248 cobalt-precorrin-6x reductase; Reviewed 82.51
PF0007080 Pyr_redox: Pyridine nucleotide-disulphide oxidored 82.5
PRK10537393 voltage-gated potassium channel; Provisional 82.37
PF13478136 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2 82.37
TIGR01162156 purE phosphoribosylaminoimidazole carboxylase, Pur 82.17
PLN028191042 lysine-ketoglutarate reductase/saccharopine dehydr 81.76
PRK09620229 hypothetical protein; Provisional 81.58
PRK12828239 short chain dehydrogenase; Provisional 81.54
PF00899135 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a 81.21
PF0007080 Pyr_redox: Pyridine nucleotide-disulphide oxidored 81.06
PRK12475338 thiamine/molybdopterin biosynthesis MoeB-like prot 80.99
CHL00194317 ycf39 Ycf39; Provisional 80.84
cd01483143 E1_enzyme_family Superfamily of activating enzymes 80.63
PRK08220252 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated 80.33
cd01483143 E1_enzyme_family Superfamily of activating enzymes 80.19
PLN00016378 RNA-binding protein; Provisional 80.18
>PLN02735 carbamoyl-phosphate synthase Back     alignment and domain information 
Probab=100.00  E-value=2e-205  Score=1956.35  Aligned_cols=1086  Identities=88%  Similarity=1.338  Sum_probs=1033.5

Q ss_pred             CCCCCCCCEEEEEcCCccccccccccchHHHHHHHHHHHCCCeEEEEccCCCCCCCCccCcceEEECCCCHHHHHHHHHH
Q 001014           86 LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEK  165 (1190)
Q Consensus        86 m~~~~~~~kVLIiG~G~~~ig~~~E~d~sg~~~~~al~~~G~~vi~v~~~~~~~~~~~~~ad~~~i~p~~~~~v~~i~~~  165 (1190)
                      -|++.+++||||||+|+++|||++||||||.+++++|+++||+|+++|+||++++++..++|+.|+.|.+.+.+.+++++
T Consensus        17 ~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~G~~Vi~vd~np~t~~~~~~~aD~~yi~p~~~e~v~~ii~~   96 (1102)
T PLN02735         17 AGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGYEVVLINSNPATIMTDPETADRTYIAPMTPELVEQVIAK   96 (1102)
T ss_pred             CCcccCCCEEEEECCCccccccceeecchHHHHHHHHHHcCCEEEEEeCCcccccCChhhCcEEEeCCCCHHHHHHHHHH
Confidence            46777889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCEEEecCCChhHHHHHHHHHHhhHHHHcCCcEeCCcHHHHHHHhcHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHH
Q 001014          166 ERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIAN  245 (1190)
Q Consensus       166 ~~~d~Vip~~~g~~~~~~~~~l~~~~~le~~gi~~~G~~~~~i~~~~DK~~~k~~l~~~Gipvp~~~~v~s~~e~~~~~~  245 (1190)
                      ++||+|+|++||+++++++..|.++++|+.+|++++|++++++++++||..||++|+++|+|+|++..+++.+++.++++
T Consensus        97 e~~D~Iip~~gg~~gl~la~~l~~~g~Le~~GI~~~G~~~~ai~~~~DK~~~k~~l~~~GIpvp~~~~v~s~eea~~~~~  176 (1102)
T PLN02735         97 ERPDALLPTMGGQTALNLAVALAESGILEKYGVELIGAKLDAIKKAEDRELFKQAMEKIGLKTPPSGIATTLDECFEIAE  176 (1102)
T ss_pred             hCCCEEEECCCchhhHHHHHHHhhhCHHHHCCCEEECCCHHHHHHhcCHHHHHHHHHHCCCCCCCeeEeCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998888


Q ss_pred             HcCCCcEEEecCCCCCCcceEEeCCHHHHHHHHHHHHhcCCCCcEEEeeecCCCeeeeEEEEEeCCCcEEEEEeeeeeCC
Q 001014          246 EIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP  325 (1190)
Q Consensus       246 ~ig~~PvVVKP~~g~gg~Gv~iv~~~~el~~~~~~~~~~~~~~~vlVEe~I~G~~E~sv~v~~d~~g~~~~~~~~e~~~~  325 (1190)
                      ++|.||+||||++++||.|+.+|+|.+||.+++..++..+..+++|||+||.||+|+++++++|.+|+++++|.++++++
T Consensus       177 ~iG~yPvVVKP~~~~GG~Gv~iv~n~eEL~~a~~~a~~~s~~~~VLVEe~I~G~kE~ev~Vl~D~~g~~i~v~~ie~~dp  256 (1102)
T PLN02735        177 DIGEFPLIIRPAFTLGGTGGGIAYNKEEFETICKAGLAASITSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENIDP  256 (1102)
T ss_pred             HhCCCCEEEEeCCCCCCCceEEECCHHHHHHHHHHHHhcCCCCeEEEEEecCCCeEEEEEEEEcCCCCEEEEeeEEEEcC
Confidence            88559999999999999999999999999999998887777889999999999999999999998889999999999999


Q ss_pred             CCcccccEEEEecCCCCCHHHHHHHHHHHHHHHHHhCCccceEEEEEEEecCCCcEEEEEeCCCCCCchHHHHHHhCCCH
Q 001014          326 MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPI  405 (1190)
Q Consensus       326 ~g~~~g~~~~~~Pa~~l~~~~~~~l~~~a~~i~~~lg~~~G~~~vef~~~~~~g~~~viEiNpR~~gs~~l~~~atG~~l  405 (1190)
                      .++|+|+++.++|++++++++++++++++.+++++||+++|++||||+++|++|++||||||||+++++.+++++||+|+
T Consensus       257 ~gvh~G~s~~vaPa~tL~~~~~q~l~~~A~ki~~aLgi~~G~~nVqf~l~~~~g~~~ViEVNPR~s~ss~l~s~atG~~~  336 (1102)
T PLN02735        257 MGVHTGDSITVAPAQTLTDKEYQRLRDYSVAIIREIGVECGGSNVQFAVNPVDGEVMIIEMNPRVSRSSALASKATGFPI  336 (1102)
T ss_pred             CccccCCEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCcCceEEEEEEECCCCcEEEEEecCCCCCcchhhhhhhCCCH
Confidence            99999999999999999999999999999999999999559999999999768899999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCccccCCCCccccCCcCeEEeeeceeeecccCCCCcccCCCCCcEEEEEEEeCCHHHHHHHHHH
Q 001014          406 AKMAAKLSVGYSLDQIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALR  485 (1190)
Q Consensus       406 ~~~~~~~alG~~l~~~~~~i~~~~~~~f~p~~~~v~~k~p~~~~~~~~~~~~~l~~~~~s~G~v~a~G~~~~ea~~ka~~  485 (1190)
                      +++++++++|++|++++++++..++++|+|.+||+++|+|+|+|.+|++++..|+|+|||+|+||++|||++||++||+|
T Consensus       337 a~~~~klalG~~l~~~~~~~~~~~~a~~ep~~d~~~~k~p~~~f~~f~~~~~~l~~~mks~ge~m~~gr~~~ea~~ka~~  416 (1102)
T PLN02735        337 AKMAAKLSVGYTLDQIPNDITLKTPASFEPSIDYVVTKIPRFAFEKFPGSQPILTTQMKSVGEAMALGRTFQESFQKALR  416 (1102)
T ss_pred             HHHHHHHHCCCChhhhccccccccchheeecCCcEEEEcccCCcccccCCCcccceeeeecceEEEecCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCccCCCCCCCCCCCCCHHHHHhHhcCCCchhHHHHHHHHHCCCChHHHHhhhCCCHHHHHHHHHHHHHHHHHHhCC
Q 001014          486 SLECGFSGWGCSNVKELDWDWEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQS  565 (1190)
Q Consensus       486 ~l~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~~~r~~~~~~a~~~g~~~~~~~~~t~i~~~~~~~~~~~~~~~~~~~~~~  565 (1190)
                      +++.+..||.......+..++++|.+.|+||+++|+|+++||||||||+++||++|+||+|||+||++|+++|++|+++.
T Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~~~~~a~~~g~~~~~~~~~t~id~~f~~~~~~~~~~~~~~~~~~  496 (1102)
T PLN02735        417 SLETGFSGWGCAKVKELDWDWEQLKYKLRVPNPDRIHAIYAAMKKGMTVDEIHELTFIDPWFLTQLKELVDVEQFLKSRS  496 (1102)
T ss_pred             HhcCCCCCCCccccccccCCHHHHHHhcCCCCCchHHHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            99999888864422211123468999999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCCHHHHHHHHhcCCCHHHHHHHhCCCHHHHHHHHHhcCCcceEEEccCCCCccCCCCCceEeeccccCCCCCCCCcE
Q 001014          566 VSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAPTQKKK  645 (1190)
Q Consensus       566 ~~~~~~~~l~~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~a~e~~~~~~~~y~~~~~~~~~~~~~~~k  645 (1190)
                      ..+++.+.|++||++||||.|||++|++++++||++|++++|.|+||+||||||||++.||||||||+.++|+.++++||
T Consensus       497 ~~~~~~~~~~~~k~~g~~d~~ia~~~~~~~~~v~~~r~~~~~~~~~k~vd~~a~ef~~~t~y~y~ty~~~~~~~~~~~kk  576 (1102)
T PLN02735        497 LSELSKDDFYEVKRRGFSDKQIAFATKSTEKEVRSKRLSLGVTPSYKRVDTCAAEFEANTPYMYSSYDGECESAPTNKKK  576 (1102)
T ss_pred             CCCCCHHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHHHCCCEeEEEeeCCCccccCCCCCcceeECCCCCCcccCCCce
Confidence            55578999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEECCCCcccCCCcccchhHHHHHHHHHhCCCeEEEecCCCCCcCccccCCcceeecCCcHHHHHHHhhhcCCCccccc
Q 001014          646 VLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQ  725 (1190)
Q Consensus       646 VlIlG~G~~rig~~~efd~~~~~~~~al~~~G~~vi~v~~~p~~~s~~~~~ad~~~~~p~~~e~v~~i~~~~~~d~Vi~~  725 (1190)
                      |||||+|++||||++||||||+|++++|+++|++++++|+||++++++++++|++|++|+++|+++++|+++++|+|+++
T Consensus       577 vlilG~G~~~igq~iefd~~~v~~~~alr~~G~~tI~v~~npetvstd~~~aD~~y~~pl~~e~vl~i~~~e~~d~Vi~~  656 (1102)
T PLN02735        577 VLILGGGPNRIGQGIEFDYCCCHASFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPDGIIVQ  656 (1102)
T ss_pred             EEEeCccccccCcccccceeHHHHHHHHHHcCCeEEEEeCCCccccCCcccCCeEEEEeCCHHHHHHHHHHhCCCEEEEC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCchhhhhhhhHHhhhccCCCcccCCCCceEEccCCHHHHhhccCHHHHHHHHHHcCCCCCCceeecCHHHHHHHHHHh
Q 001014          726 FGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI  805 (1190)
Q Consensus       726 ~g~~~~~~la~~l~~~l~~~~~l~~~G~~~i~~~g~~~~~i~~~~DK~~~~~~l~~~gIp~p~~~~~~s~~e~~~~~~~i  805 (1190)
                      +|++++++++..+.++|++++.+.+.+...+.++||+++++++++||.+++++|+++|||+|++..+.+.+++.++++++
T Consensus       657 ~Ggq~~l~la~~l~~~L~e~~~fa~~~~~gi~i~G~s~e~i~i~~DK~~~k~~l~~~GIp~p~~~~v~s~eea~~~a~~i  736 (1102)
T PLN02735        657 FGGQTPLKLALPIQKYLDKNPPPSASGNGNVKIWGTSPDSIDAAEDRERFNAILNELKIEQPKGGIARSEADALAIAKRI  736 (1102)
T ss_pred             CCchHHHHHHHHHHHHHHhccchhhhhcCCeEEECCCHHHHHHhcCHHHHHHHHHHcCCCCCCeeEeCCHHHHHHHHHhc
Confidence            99999999999999888887766543211299999999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEecCcCCCCcceEEeCCHHHHHHHHHHhHhhCCCCcEEEEEecCCcceEEEeEEecCCCcEEEEeeeeeeecccc
Q 001014          806 GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHIEQAGV  885 (1190)
Q Consensus       806 gyPvvvKP~~~~gg~Gv~iv~~~~el~~~~~~~~~~~~~~~vliEefI~~g~E~~v~v~~d~~G~v~~~~i~e~~~~~g~  885 (1190)
                      ||||||||++++||+||.+|+|.+||+++++.+...+++++++||+||++|+|++|++++|++|++++++++||+++.|+
T Consensus       737 GyPvvVKP~~g~gG~G~~iV~~~eeL~~al~~a~~~~~~~~vlVEefI~~g~Ei~V~vl~D~~G~vv~~~i~e~~~~~gv  816 (1102)
T PLN02735        737 GYPVVVRPSYVLGGRAMEIVYSDDKLKTYLETAVEVDPERPVLVDKYLSDATEIDVDALADSEGNVVIGGIMEHIEQAGV  816 (1102)
T ss_pred             CCCeEEEeCCCCCCCcEEEECCHHHHHHHHHHHHHhcCCCCEEEEEecCCcEEEEEEEEECCCCCEEEecceEeeeccCc
Confidence            99999999999999999999999999999999887777789999999977999999999998899999999999999999


Q ss_pred             cccccccccCCCCCCHHHHHHHHHHHHHHHHHcCCCcceeEEEEEecCCCEEEEEEccCCCCChhhhhcccCCCHHHHHH
Q 001014          886 HSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAA  965 (1190)
Q Consensus       886 ~~gd~~~~~p~~~l~~~~~~~i~~~a~~i~~~Lg~~G~~~ief~~d~~g~~~viEiNpR~~~s~~~~~~~~G~~l~~~~~  965 (1190)
                      |+|++.+.+|++.++++..+++++++.+++++||++|++++||+++++|++||||+|||+++++|++++++|+|++++++
T Consensus       817 hsGds~~~~P~~~L~~e~~~~i~~~a~ki~~~L~~~G~~~vqf~v~~dg~~yviEiNpR~s~t~p~~~katGidl~~~~~  896 (1102)
T PLN02735        817 HSGDSACSLPTQTIPSSCLATIRDWTTKLAKRLNVCGLMNCQYAITPSGEVYIIEANPRASRTVPFVSKAIGHPLAKYAS  896 (1102)
T ss_pred             cCCCccEEecCCCCCHHHHHHHHHHHHHHHHHcCCcceeeEEEEEcCCCcEEEEEEeCCCCccHHHHHHHHCCCHHHHHH
Confidence            99999999999899999999999999999999999999999999977889999999999999999999999999999999


Q ss_pred             HHHcCCCCCCCCCCccccCCeeEEeeccCCCcccCCCceeeCCcccccceeeeeeCCHHHHHHHHHHHcCCCCCCCCcee
Q 001014          966 LVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045 (1190)
Q Consensus       966 ~~~lG~~l~~~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~lg~~~rs~G~v~~~g~~~~eA~~ka~~~~~~~~p~~g~~~ 1045 (1190)
                      ++++|++|.++++.+++.+++++||+|+|||++|+++|+.||++|||||||||+|+|+++|+.||+.+.++++|..|++|
T Consensus       897 ~~~~G~~l~~~~~~~~~~~~~~~vk~~vf~~~~~~~~d~~lg~emkStGe~~g~~~~~~~a~~ka~~~~~~~~p~~g~vl  976 (1102)
T PLN02735        897 LVMSGKSLKDLGFTEEVIPAHVSVKEAVLPFDKFQGCDVLLGPEMRSTGEVMGIDYEFSKAFAKAQIAAGQRLPLSGTVF  976 (1102)
T ss_pred             HHHcCCChhhcCCCcccccCeEEEEeccCChhhCCCCCCCcceEEEeCCceeeecCCHHHHHHHHHhcCCCccCCCCeEE
Confidence            99999999998877677789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCChhHHHHHHHHHHHCCCeeeeccccHHHHHHcCCceEEEecccCCCCcHHhHHHcCcEEEEEEcCCCCCCCCcc
Q 001014         1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDSLDQID 1125 (1190)
Q Consensus      1046 ~~~~~~~~~~~~~~~~~~~~~g~~i~a~~gt~~~l~~~g~~~~~v~~~~e~~~~~~~~i~~~~i~lvint~~~~~~~~~d 1125 (1190)
                      +++.+.+|+.+.+.++.|.++||+|+||.||+++|+++||+++.|.|+++++||++|+|++|+||+|||||+++....+|
T Consensus       977 iSv~d~~K~~~~~~a~~L~~lG~~i~aT~GTa~~L~~~Gi~~~~v~~~~~~~~~~~~~i~~~~i~~vin~~~~~~~~~~d 1056 (1102)
T PLN02735        977 ISLNDLTKPHLVPIARGFLELGFRIVSTSGTAHFLELAGIPVERVLKLHEGRPHAGDMLANGQIQLMVITSSGDALDQKD 1056 (1102)
T ss_pred             EEEecCCchhHHHHHHHHHHCCCEEEEccHHHHHHHHCCCceEEEeeccCCCccHHHHHHcCCeEEEEECCCCccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999875433689


Q ss_pred             cHHHHHHHHHCCCcEEccHHHHHHHHHHHHhccCCCcccccchhhh
Q 001014         1126 GLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFF 1171 (1190)
Q Consensus      1126 ~~~iRr~A~~~~ip~~T~~~~a~a~~~al~~~~~~~~~~~~l~~~~ 1171 (1190)
                      ||+|||+|+++||||||++++|++++++|+....+.+++.+|||||
T Consensus      1057 ~~~iRr~a~~~~ip~~t~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 1102 (1102)
T PLN02735       1057 GRQLRRMALAYKVPIITTVAGALATAQAVKSLKECPIEMIALQDFF 1102 (1102)
T ss_pred             cHHHHHHHHHcCCCEEecHHHHHHHHHHHHhhcCCCceEeEhHHhC
Confidence            9999999999999999999999999999976544557899999997

>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit Back     alignment and domain information
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>KOG0370 consensus Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase) [General function prediction only] Back     alignment and domain information
>COG0458 CarB Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism] Back     alignment and domain information
>PLN02735 carbamoyl-phosphate synthase Back     alignment and domain information
>COG0458 CarB Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism] Back     alignment and domain information
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit Back     alignment and domain information
>KOG0370 consensus Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase) [General function prediction only] Back     alignment and domain information
>PRK08654 pyruvate carboxylase subunit A; Validated Back     alignment and domain information
>COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] Back     alignment and domain information
>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit Back     alignment and domain information
>PRK07178 pyruvate carboxylase subunit A; Validated Back     alignment and domain information
>PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional Back     alignment and domain information
>PRK05586 biotin carboxylase; Validated Back     alignment and domain information
>PRK08463 acetyl-CoA carboxylase subunit A; Validated Back     alignment and domain information
>PRK08462 biotin carboxylase; Validated Back     alignment and domain information
>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated Back     alignment and domain information
>KOG0238 consensus 3-Methylcrotonyl-CoA carboxylase, biotin-containing subunit/Propionyl-CoA carboxylase, alpha chain/Acetyl-CoA carboxylase, biotin carboxylase subunit [Lipid transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion] Back     alignment and domain information
>COG0439 AccC Biotin carboxylase [Lipid metabolism] Back     alignment and domain information
>PRK12999 pyruvate carboxylase; Reviewed Back     alignment and domain information
>TIGR01235 pyruv_carbox pyruvate carboxylase Back     alignment and domain information
>PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated Back     alignment and domain information
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed Back     alignment and domain information
>COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] Back     alignment and domain information
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK07178 pyruvate carboxylase subunit A; Validated Back     alignment and domain information
>PRK08654 pyruvate carboxylase subunit A; Validated Back     alignment and domain information
>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit Back     alignment and domain information
>PLN02948 phosphoribosylaminoimidazole carboxylase Back     alignment and domain information
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed Back     alignment and domain information
>PRK05586 biotin carboxylase; Validated Back     alignment and domain information
>PRK08463 acetyl-CoA carboxylase subunit A; Validated Back     alignment and domain information
>TIGR02712 urea_carbox urea carboxylase Back     alignment and domain information
>PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional Back     alignment and domain information
>KOG0369 consensus Pyruvate carboxylase [Energy production and conversion] Back     alignment and domain information
>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated Back     alignment and domain information
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 Back     alignment and domain information
>PF02787 CPSase_L_D3: Carbamoyl-phosphate synthetase large chain, oligomerisation domain; InterPro: IPR005480 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) Back     alignment and domain information
>PLN02948 phosphoribosylaminoimidazole carboxylase Back     alignment and domain information
>KOG0238 consensus 3-Methylcrotonyl-CoA carboxylase, biotin-containing subunit/Propionyl-CoA carboxylase, alpha chain/Acetyl-CoA carboxylase, biotin carboxylase subunit [Lipid transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>PRK08462 biotin carboxylase; Validated Back     alignment and domain information
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion] Back     alignment and domain information
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein Back     alignment and domain information
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 Back     alignment and domain information
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated Back     alignment and domain information
>PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated Back     alignment and domain information
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated Back     alignment and domain information
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein Back     alignment and domain information
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0439 AccC Biotin carboxylase [Lipid metabolism] Back     alignment and domain information
>KOG0369 consensus Pyruvate carboxylase [Energy production and conversion] Back     alignment and domain information
>TIGR01235 pyruv_carbox pyruvate carboxylase Back     alignment and domain information
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK06395 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>PRK12999 pyruvate carboxylase; Reviewed Back     alignment and domain information
>TIGR02712 urea_carbox urea carboxylase Back     alignment and domain information
>PRK06395 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>PRK13789 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>PRK00885 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism] Back     alignment and domain information
>PF02786 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, ATP binding domain; InterPro: IPR005479 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) Back     alignment and domain information
>TIGR00877 purD phosphoribosylamine--glycine ligase Back     alignment and domain information
>PRK07206 hypothetical protein; Provisional Back     alignment and domain information
>PRK13789 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>PRK05784 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>PF02786 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, ATP binding domain; InterPro: IPR005479 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) Back     alignment and domain information
>PRK05784 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>PLN02257 phosphoribosylamine--glycine ligase Back     alignment and domain information
>PRK00885 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>TIGR00877 purD phosphoribosylamine--glycine ligase Back     alignment and domain information
>PRK02186 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK14569 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional Back     alignment and domain information
>COG0151 PurD Phosphoribosylamine-glycine ligase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK01966 ddl D-alanyl-alanine synthetase A; Reviewed Back     alignment and domain information
>COG0151 PurD Phosphoribosylamine-glycine ligase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK13790 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>PLN02257 phosphoribosylamine--glycine ligase Back     alignment and domain information
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional Back     alignment and domain information
>PRK14572 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed Back     alignment and domain information
>TIGR01205 D_ala_D_alaTIGR D-alanine--D-alanine ligase Back     alignment and domain information
>PRK14568 vanB D-alanine--D-lactate ligase; Provisional Back     alignment and domain information
>PRK07206 hypothetical protein; Provisional Back     alignment and domain information
>PRK14570 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>PRK13790 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>PRK14571 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>PRK02186 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK14569 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>PF15632 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathway with Ter operon Back     alignment and domain information
>KOG0368 consensus Acetyl-CoA carboxylase [Lipid transport and metabolism] Back     alignment and domain information
>PRK14573 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase; Provisional Back     alignment and domain information
>PF15632 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathway with Ter operon Back     alignment and domain information
>TIGR01205 D_ala_D_alaTIGR D-alanine--D-alanine ligase Back     alignment and domain information
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed Back     alignment and domain information
>PRK06849 hypothetical protein; Provisional Back     alignment and domain information
>PRK01966 ddl D-alanyl-alanine synthetase A; Reviewed Back     alignment and domain information
>PRK06849 hypothetical protein; Provisional Back     alignment and domain information
>PRK14568 vanB D-alanine--D-lactate ligase; Provisional Back     alignment and domain information
>PRK14572 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>PRK14570 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>PRK06524 biotin carboxylase-like protein; Validated Back     alignment and domain information
>PRK14571 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>KOG0368 consensus Acetyl-CoA carboxylase [Lipid transport and metabolism] Back     alignment and domain information
>PRK14573 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase; Provisional Back     alignment and domain information
>PRK06524 biotin carboxylase-like protein; Validated Back     alignment and domain information
>KOG0237 consensus Glycinamide ribonucleotide synthetase (GARS)/Aminoimidazole ribonucleotide synthetase (AIRS) [Nucleotide transport and metabolism] Back     alignment and domain information
>PF02222 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 The ATP-grasp domain has an unusual nucleotide-binding fold, also referred to as palmate, and is found in a superfamily of enzymes including D-alanine-D-alanine ligase, glutathione synthetase, biotin carboxylase, and carbamoyl phosphate synthetase, the ribosomal protein S6 modification enzyme (RimK), urea amidolyase, tubulin-tyrosine ligase, and three enzymes of purine biosynthesis Back     alignment and domain information
>COG1181 DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK10446 ribosomal protein S6 modification protein; Provisional Back     alignment and domain information
>PF13535 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 3LN7_B 2PN1_A 4DIM_A Back     alignment and domain information
>PF13535 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 3LN7_B 2PN1_A 4DIM_A Back     alignment and domain information
>PRK13278 purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase; Provisional Back     alignment and domain information
>TIGR00768 rimK_fam alpha-L-glutamate ligases, RimK family Back     alignment and domain information
>COG2232 Predicted ATP-dependent carboligase related to biotin carboxylase [General function prediction only] Back     alignment and domain information
>COG2232 Predicted ATP-dependent carboligase related to biotin carboxylase [General function prediction only] Back     alignment and domain information
>PRK10446 ribosomal protein S6 modification protein; Provisional Back     alignment and domain information
>TIGR00768 rimK_fam alpha-L-glutamate ligases, RimK family Back     alignment and domain information
>PRK13278 purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase; Provisional Back     alignment and domain information
>KOG0237 consensus Glycinamide ribonucleotide synthetase (GARS)/Aminoimidazole ribonucleotide synthetase (AIRS) [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR02144 LysX_arch Lysine biosynthesis enzyme LysX Back     alignment and domain information
>PF02222 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 The ATP-grasp domain has an unusual nucleotide-binding fold, also referred to as palmate, and is found in a superfamily of enzymes including D-alanine-D-alanine ligase, glutathione synthetase, biotin carboxylase, and carbamoyl phosphate synthetase, the ribosomal protein S6 modification enzyme (RimK), urea amidolyase, tubulin-tyrosine ligase, and three enzymes of purine biosynthesis Back     alignment and domain information
>PRK13277 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein; Provisional Back     alignment and domain information
>PRK13277 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein; Provisional Back     alignment and domain information
>TIGR02144 LysX_arch Lysine biosynthesis enzyme LysX Back     alignment and domain information
>PF07478 Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; InterPro: IPR011095 This entry represents the C-terminal, catalytic domain of the D-alanine--D-alanine ligase enzyme 6 Back     alignment and domain information
>PF07478 Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; InterPro: IPR011095 This entry represents the C-terminal, catalytic domain of the D-alanine--D-alanine ligase enzyme 6 Back     alignment and domain information
>PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6 Back     alignment and domain information
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP) Back     alignment and domain information
>cd00532 MGS-like MGS-like domain Back     alignment and domain information
>PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6 Back     alignment and domain information
>COG1181 DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III Back     alignment and domain information
>PRK05234 mgsA methylglyoxal synthase; Validated Back     alignment and domain information
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal Back     alignment and domain information
>COG3919 Predicted ATP-grasp enzyme [General function prediction only] Back     alignment and domain information
>PF02655 ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 The ATP-grasp fold is one of several distinct ATP-binding folds, and is found in enzymes that catalyze the formation of amide bonds, catalyzing the ATP-dependent ligation of a carboxylate-containing molecule to an amino or thiol group-containing molecule [] Back     alignment and domain information
>COG3919 Predicted ATP-grasp enzyme [General function prediction only] Back     alignment and domain information
>PF02655 ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 The ATP-grasp fold is one of several distinct ATP-binding folds, and is found in enzymes that catalyze the formation of amide bonds, catalyzing the ATP-dependent ligation of a carboxylate-containing molecule to an amino or thiol group-containing molecule [] Back     alignment and domain information
>COG0189 RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0189 RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF08443 RimK: RimK-like ATP-grasp domain; InterPro: IPR013651 This ATP-grasp domain is found in the ribosomal S6 modification enzyme RimK [] Back     alignment and domain information
>PF08443 RimK: RimK-like ATP-grasp domain; InterPro: IPR013651 This ATP-grasp domain is found in the ribosomal S6 modification enzyme RimK [] Back     alignment and domain information
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103 Back     alignment and domain information
>smart00851 MGS MGS-like domain Back     alignment and domain information
>PRK12458 glutathione synthetase; Provisional Back     alignment and domain information
>PRK14016 cyanophycin synthetase; Provisional Back     alignment and domain information
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine Back     alignment and domain information
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103 Back     alignment and domain information
>PRK14016 cyanophycin synthetase; Provisional Back     alignment and domain information
>PLN02941 inositol-tetrakisphosphate 1-kinase Back     alignment and domain information
>COG1821 Predicted ATP-utilizing enzyme (ATP-grasp superfamily) [General function prediction only] Back     alignment and domain information
>PRK02471 bifunctional glutamate--cysteine ligase/glutathione synthetase; Provisional Back     alignment and domain information
>COG1821 Predicted ATP-utilizing enzyme (ATP-grasp superfamily) [General function prediction only] Back     alignment and domain information
>PRK12458 glutathione synthetase; Provisional Back     alignment and domain information
>PRK02471 bifunctional glutamate--cysteine ligase/glutathione synthetase; Provisional Back     alignment and domain information
>TIGR01380 glut_syn glutathione synthetase, prokaryotic Back     alignment and domain information
>TIGR01435 glu_cys_lig_rel glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type Back     alignment and domain information
>TIGR01435 glu_cys_lig_rel glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type Back     alignment and domain information
>PLN02941 inositol-tetrakisphosphate 1-kinase Back     alignment and domain information
>PRK05246 glutathione synthetase; Provisional Back     alignment and domain information
>TIGR02068 cya_phycin_syn cyanophycin synthetase Back     alignment and domain information
>TIGR01380 glut_syn glutathione synthetase, prokaryotic Back     alignment and domain information
>TIGR02068 cya_phycin_syn cyanophycin synthetase Back     alignment and domain information
>PRK05246 glutathione synthetase; Provisional Back     alignment and domain information
>TIGR02291 rimK_rel_E_lig alpha-L-glutamate ligase-related protein Back     alignment and domain information
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and metabolism] Back     alignment and domain information
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and metabolism] Back     alignment and domain information
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) Back     alignment and domain information
>TIGR02291 rimK_rel_E_lig alpha-L-glutamate ligase-related protein Back     alignment and domain information
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) Back     alignment and domain information
>PF14398 ATPgrasp_YheCD: YheC/D like ATP-grasp Back     alignment and domain information
>TIGR01016 sucCoAbeta succinyl-CoA synthetase, beta subunit Back     alignment and domain information
>TIGR01016 sucCoAbeta succinyl-CoA synthetase, beta subunit Back     alignment and domain information
>PF14397 ATPgrasp_ST: Sugar-transfer associated ATP-grasp Back     alignment and domain information
>PF14397 ATPgrasp_ST: Sugar-transfer associated ATP-grasp Back     alignment and domain information
>PF14398 ATPgrasp_YheCD: YheC/D like ATP-grasp Back     alignment and domain information
>PRK00696 sucC succinyl-CoA synthetase subunit beta; Provisional Back     alignment and domain information
>PRK00696 sucC succinyl-CoA synthetase subunit beta; Provisional Back     alignment and domain information
>COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion] Back     alignment and domain information
>PF08442 ATP-grasp_2: ATP-grasp domain; InterPro: IPR013650 The ATP-grasp superfamily currently includes 17 groups of enzymes, catalyzing ATP-dependent ligation of a carboxylate containing molecule to an amino or thiol group-containing molecule [] Back     alignment and domain information
>COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion] Back     alignment and domain information
>PF08442 ATP-grasp_2: ATP-grasp domain; InterPro: IPR013650 The ATP-grasp superfamily currently includes 17 groups of enzymes, catalyzing ATP-dependent ligation of a carboxylate containing molecule to an amino or thiol group-containing molecule [] Back     alignment and domain information
>PF05770 Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6-kinase; InterPro: IPR008656 This entry represents inositol-tetrakisphosphate 1-kinase which is also called inositol 1,3,4-trisphosphate 5/6-kinase Back     alignment and domain information
>PF13549 ATP-grasp_5: ATP-grasp domain; PDB: 1WR2_A Back     alignment and domain information
>PRK14046 malate--CoA ligase subunit beta; Provisional Back     alignment and domain information
>PRK14046 malate--CoA ligase subunit beta; Provisional Back     alignment and domain information
>PF05770 Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6-kinase; InterPro: IPR008656 This entry represents inositol-tetrakisphosphate 1-kinase which is also called inositol 1,3,4-trisphosphate 5/6-kinase Back     alignment and domain information
>PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6 Back     alignment and domain information
>cd01421 IMPCH Inosine monophosphate cyclohydrolase domain Back     alignment and domain information
>PLN00124 succinyl-CoA ligase [GDP-forming] subunit beta; Provisional Back     alignment and domain information
>PLN00124 succinyl-CoA ligase [GDP-forming] subunit beta; Provisional Back     alignment and domain information
>PF02955 GSH-S_ATP: Prokaryotic glutathione synthetase, ATP-grasp domain; InterPro: IPR004218 Prokaryotic glutathione synthetase 6 Back     alignment and domain information
>PF13549 ATP-grasp_5: ATP-grasp domain; PDB: 1WR2_A Back     alignment and domain information
>PLN02235 ATP citrate (pro-S)-lyase Back     alignment and domain information
>PLN02235 ATP citrate (pro-S)-lyase Back     alignment and domain information
>PF02955 GSH-S_ATP: Prokaryotic glutathione synthetase, ATP-grasp domain; InterPro: IPR004218 Prokaryotic glutathione synthetase 6 Back     alignment and domain information
>PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6 Back     alignment and domain information
>PF02750 Synapsin_C: Synapsin, ATP binding domain; InterPro: IPR020898 The synapsins are a family of neuron-specific phosphoproteins that coat synaptic vesicles and are involved in the binding between these vesicles and the cytoskeleton (including actin filaments) Back     alignment and domain information
>PRK00881 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional Back     alignment and domain information
>PF01820 Dala_Dala_lig_N: D-ala D-ala ligase N-terminus; InterPro: IPR011127 This entry represents the N-terminal region of the D-alanine--D-alanine ligase enzyme (6 Back     alignment and domain information
>PF14305 ATPgrasp_TupA: TupA-like ATPgrasp Back     alignment and domain information
>PF14305 ATPgrasp_TupA: TupA-like ATPgrasp Back     alignment and domain information
>PLN02891 IMP cyclohydrolase Back     alignment and domain information
>PF02785 Biotin_carb_C: Biotin carboxylase C-terminal domain; InterPro: IPR005482 Acetyl-CoA carboxylase is found in all animals, plants, and bacteria and catalyzes the first committed step in fatty acid synthesis Back     alignment and domain information
>PF02750 Synapsin_C: Synapsin, ATP binding domain; InterPro: IPR020898 The synapsins are a family of neuron-specific phosphoproteins that coat synaptic vesicles and are involved in the binding between these vesicles and the cytoskeleton (including actin filaments) Back     alignment and domain information
>TIGR00355 purH phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Back     alignment and domain information
>TIGR00160 MGSA methylglyoxal synthase Back     alignment and domain information
>COG1803 MgsA Methylglyoxal synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00878 Biotin_carb_C Biotin carboxylase C-terminal domain Back     alignment and domain information
>PF03133 TTL: Tubulin-tyrosine ligase family; InterPro: IPR004344 Tubulins and microtubules are subjected to several post-translational modifications of which the reversible detyrosination/tyrosination of the carboxy-terminal end of most alpha-tubulins has been extensively analysed Back     alignment and domain information
>PF06849 DUF1246: Protein of unknown function (DUF1246); InterPro: IPR010672 The last two steps of de novo purine biosynthesis are: i) conversion of 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate (FAICAR) ii) conversion of FAICAR to inosine5'-monophopsphate (IMP) In bacteria and eukaryotes, these steps are catalysed by the well-characterised bifunctional enzyme PurH [] Back     alignment and domain information
>PF03133 TTL: Tubulin-tyrosine ligase family; InterPro: IPR004344 Tubulins and microtubules are subjected to several post-translational modifications of which the reversible detyrosination/tyrosination of the carboxy-terminal end of most alpha-tubulins has been extensively analysed Back     alignment and domain information
>PF06849 DUF1246: Protein of unknown function (DUF1246); InterPro: IPR010672 The last two steps of de novo purine biosynthesis are: i) conversion of 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate (FAICAR) ii) conversion of FAICAR to inosine5'-monophopsphate (IMP) In bacteria and eukaryotes, these steps are catalysed by the well-characterised bifunctional enzyme PurH [] Back     alignment and domain information
>PF14403 CP_ATPgrasp_2: Circularly permuted ATP-grasp type 2 Back     alignment and domain information
>PF06973 DUF1297: Domain of unknown function (DUF1297); InterPro: IPR009720 The last two steps of de novo purine biosynthesis are: i) conversion of 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate (FAICAR) ii) conversion of FAICAR to inosine5'-monophopsphate (IMP) In bacteria and eukaryotes, these steps are catalysed by the well-characterised bifunctional enzyme PurH [] Back     alignment and domain information
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR00715 precor6x_red precorrin-6x reductase Back     alignment and domain information
>PRK08057 cobalt-precorrin-6x reductase; Reviewed Back     alignment and domain information
>PF06973 DUF1297: Domain of unknown function (DUF1297); InterPro: IPR009720 The last two steps of de novo purine biosynthesis are: i) conversion of 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate (FAICAR) ii) conversion of FAICAR to inosine5'-monophopsphate (IMP) In bacteria and eukaryotes, these steps are catalysed by the well-characterised bifunctional enzyme PurH [] Back     alignment and domain information
>KOG3895 consensus Synaptic vesicle protein Synapsin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG3895 consensus Synaptic vesicle protein Synapsin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF14403 CP_ATPgrasp_2: Circularly permuted ATP-grasp type 2 Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] Back     alignment and domain information
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] Back     alignment and domain information
>PF14243 DUF4343: Domain of unknown function (DUF4343) Back     alignment and domain information
>PF14243 DUF4343: Domain of unknown function (DUF4343) Back     alignment and domain information
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt Back     alignment and domain information
>PF11379 DUF3182: Protein of unknown function (DUF3182); InterPro: IPR021519 This family of proteins with unknown function appears to be restricted to Proteobacteria Back     alignment and domain information
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton] Back     alignment and domain information
>PF11379 DUF3182: Protein of unknown function (DUF3182); InterPro: IPR021519 This family of proteins with unknown function appears to be restricted to Proteobacteria Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>KOG2799 consensus Succinyl-CoA synthetase, beta subunit [Energy production and conversion] Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] Back     alignment and domain information
>COG0138 PurH AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) [Nucleotide transport and metabolism] Back     alignment and domain information
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN00016 RNA-binding protein; Provisional Back     alignment and domain information
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A Back     alignment and domain information
>TIGR00715 precor6x_red precorrin-6x reductase Back     alignment and domain information
>PRK04148 hypothetical protein; Provisional Back     alignment and domain information
>PRK04148 hypothetical protein; Provisional Back     alignment and domain information
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A Back     alignment and domain information
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>KOG2799 consensus Succinyl-CoA synthetase, beta subunit [Energy production and conversion] Back     alignment and domain information
>PRK05849 hypothetical protein; Provisional Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A Back     alignment and domain information
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase Back     alignment and domain information
>KOG2156 consensus Tubulin-tyrosine ligase-related protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN02572 UDP-sulfoquinovose synthase Back     alignment and domain information
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional Back     alignment and domain information
>KOG2835 consensus Phosphoribosylamidoimidazole-succinocarboxamide synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton] Back     alignment and domain information
>CHL00194 ycf39 Ycf39; Provisional Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>COG2344 AT-rich DNA-binding protein [General function prediction only] Back     alignment and domain information
>PRK05472 redox-sensing transcriptional repressor Rex; Provisional Back     alignment and domain information
>KOG1447 consensus GTP-specific succinyl-CoA synthetase, beta subunit [Energy production and conversion] Back     alignment and domain information
>KOG2156 consensus Tubulin-tyrosine ligase-related protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC Back     alignment and domain information
>COG2910 Putative NADH-flavin reductase [General function prediction only] Back     alignment and domain information
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] Back     alignment and domain information
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK05849 hypothetical protein; Provisional Back     alignment and domain information
>PLN02695 GDP-D-mannose-3',5'-epimerase Back     alignment and domain information
>KOG2555 consensus AICAR transformylase/IMP cyclohydrolase/methylglyoxal synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase Back     alignment and domain information
>PRK08057 cobalt-precorrin-6x reductase; Reviewed Back     alignment and domain information
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>PRK10537 voltage-gated potassium channel; Provisional Back     alignment and domain information
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A Back     alignment and domain information
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein Back     alignment and domain information
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase Back     alignment and domain information
>PRK09620 hypothetical protein; Provisional Back     alignment and domain information
>PRK12828 short chain dehydrogenase; Provisional Back     alignment and domain information
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP Back     alignment and domain information
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional Back     alignment and domain information
>CHL00194 ycf39 Ycf39; Provisional Back     alignment and domain information
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins Back     alignment and domain information
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated Back     alignment and domain information
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins Back     alignment and domain information
>PLN00016 RNA-binding protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1190
1jdb_B1073 Carbamoyl Phosphate Synthetase From Escherichia Col 0.0
1ce8_A1073 Carbamoyl Phosphate Synthetase From Escherichis Col 0.0
1a9x_A1073 Carbamoyl Phosphate Synthetase: Caught In The Act O 0.0
2dzd_A461 Crystal Structure Of The Biotin Carboxylase Domain 3e-11
2dzd_A461 Crystal Structure Of The Biotin Carboxylase Domain 4e-04
1ulz_A451 Crystal Structure Of The Biotin Carboxylase Subunit 7e-11
1ulz_A451 Crystal Structure Of The Biotin Carboxylase Subunit 2e-06
2vqd_A464 Crystal Structure Of Biotin Carboxylase From Pseudo 4e-08
2vqd_A464 Crystal Structure Of Biotin Carboxylase From Pseudo 7e-06
2qf7_A1165 Crystal Structure Of A Complete Multifunctional Pyr 7e-08
2qf7_A 1165 Crystal Structure Of A Complete Multifunctional Pyr 4e-06
3tw7_A1165 Structure Of Rhizobium Etli Pyruvate Carboxylase T8 7e-08
3tw7_A 1165 Structure Of Rhizobium Etli Pyruvate Carboxylase T8 4e-06
2yl2_A540 Crystal Structure Of Human Acetyl-Coa Carboxylase 1 2e-07
4hnu_A1173 Crystal Structure Of K442e Mutant Of S. Aureus Pyru 9e-07
4hnu_A 1173 Crystal Structure Of K442e Mutant Of S. Aureus Pyru 3e-05
3bg5_A1173 Crystal Structure Of Staphylococcus Aureus Pyruvate 9e-07
3bg5_A 1173 Crystal Structure Of Staphylococcus Aureus Pyruvate 3e-05
4hnt_A1173 Crystal Structure Of F403a Mutant Of S. Aureus Pyru 9e-07
4hnt_A 1173 Crystal Structure Of F403a Mutant Of S. Aureus Pyru 3e-05
4hnv_A1173 Crystal Structure Of R54e Mutant Of S. Aureus Pyruv 9e-07
4hnv_A 1173 Crystal Structure Of R54e Mutant Of S. Aureus Pyruv 3e-05
3ho8_A1150 Crystal Structure Of S. Aureus Pyruvate Carboxylase 1e-06
3ho8_A 1150 Crystal Structure Of S. Aureus Pyruvate Carboxylase 3e-05
3hb9_A1150 Crystal Structure Of S. Aureus Pyruvate Carboxylase 1e-06
3hb9_A 1150 Crystal Structure Of S. Aureus Pyruvate Carboxylase 3e-05
3hbl_A1150 Crystal Structure Of S. Aureus Pyruvate Carboxylase 1e-06
3hbl_A 1150 Crystal Structure Of S. Aureus Pyruvate Carboxylase 3e-05
3n6r_A681 Crystal Structure Of The Holoenzyme Of Propionyl-co 1e-06
3n6r_A 681 Crystal Structure Of The Holoenzyme Of Propionyl-co 6e-06
1w93_A553 Crystal Structure Of Biotin Carboxylase Domain Of A 6e-06
1w96_A554 Crystal Structure Of Biotin Carboxylase Domain Of A 6e-06
2vpq_A451 Crystal Structure Of Biotin Carboxylase From S. Aur 6e-05
3g8d_A444 Crystal Structure Of The Biotin Carboxylase Subunit 7e-05
2gpw_A469 Crystal Structure Of The Biotin Carboxylase Subunit 9e-05
3rup_B452 Crystal Structure Of E.Coli Biotin Carboxylase In C 9e-05
3rv4_A452 Crystal Structure Of E.Coli Biotin Carboxylase R16e 9e-05
3jzf_A486 Crystal Structure Of Biotin Carboxylase From E. Col 1e-04
1bnc_A449 Three-Dimensional Structure Of The Biotin Carboxyla 1e-04
2gps_A469 Crystal Structure Of The Biotin Carboxylase Subunit 1e-04
3g8c_A444 Crystal Stucture Of Biotin Carboxylase In Complex W 1e-04
2hjw_A573 Crystal Structure Of The Bc Domain Of Acc2 Length = 1e-04
3jrw_A587 Phosphorylated Bc Domain Of Acc2 Length = 587 1e-04
3gid_A540 The Biotin Carboxylase (Bc) Domain Of Human Acetyl- 1e-04
3jrx_A587 Crystal Structure Of The Bc Domain Of Acc2 In Compl 1e-04
1dv2_A452 The Structure Of Biotin Carboxylase, Mutant E288k, 3e-04
3ouz_A446 Crystal Structure Of Biotin Carboxylase-Adp Complex 5e-04
>pdb|1JDB|B Chain B, Carbamoyl Phosphate Synthetase From Escherichia Coli Length = 1073 Back     alignment and structure 
Iteration: 1

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1071 (57%), Positives = 782/1071 (73%), Gaps = 19/1071 (1%)
Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VIL+NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMAD 62
Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122
Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181
Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241
Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301
Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361
Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421
Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481
Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541
Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601
Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+          
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLA---------- 651
Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
            R   A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 652  RALEAAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708
Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVRPSYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768
Query: 866  DSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMN 925
            D    V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLMN
Sbjct: 769  DG-EMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMN 827
Query: 926  CQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPK 985
             Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP 
Sbjct: 828  VQFAVKNN-EVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPP 886
Query: 986  HVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTVF 1045
            + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G   
Sbjct: 887  YYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRAL 946
Query: 1046 LSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVA 1105
            LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D + 
Sbjct: 947  LSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIK 1006
Query: 1106 NGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRS 1156
            NG+   ++ T+SG    + D   +RR  L YKV   TT++G  A A A+ +
Sbjct: 1007 NGEYTYIINTTSGRRAIE-DSRVIRRSALQYKVHYDTTLNGGFATAMALNA 1056
>pdb|1CE8|A Chain A, Carbamoyl Phosphate Synthetase From Escherichis Coli With Complexed With The Allosteric Ligand Imp Length = 1073 Back     alignment and structure
>pdb|1A9X|A Chain A, Carbamoyl Phosphate Synthetase: Caught In The Act Of Glutamine Hydrolysis Length = 1073 Back     alignment and structure
>pdb|2DZD|A Chain A, Crystal Structure Of The Biotin Carboxylase Domain Of Pyruvate Carboxylase Length = 461 Back     alignment and structure
>pdb|2DZD|A Chain A, Crystal Structure Of The Biotin Carboxylase Domain Of Pyruvate Carboxylase Length = 461 Back     alignment and structure
>pdb|1ULZ|A Chain A, Crystal Structure Of The Biotin Carboxylase Subunit Of Pyruvate Carboxylase Length = 451 Back     alignment and structure
>pdb|1ULZ|A Chain A, Crystal Structure Of The Biotin Carboxylase Subunit Of Pyruvate Carboxylase Length = 451 Back     alignment and structure
>pdb|2VQD|A Chain A, Crystal Structure Of Biotin Carboxylase From Pseudomonas Aeruginosa Complexed With Ampcp Length = 464 Back     alignment and structure
>pdb|2VQD|A Chain A, Crystal Structure Of Biotin Carboxylase From Pseudomonas Aeruginosa Complexed With Ampcp Length = 464 Back     alignment and structure
>pdb|2QF7|A Chain A, Crystal Structure Of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli Length = 1165 Back     alignment and structure
>pdb|2QF7|A Chain A, Crystal Structure Of A Complete Multifunctional Pyruvate Carboxylase From Rhizobium Etli Length = 1165 Back     alignment and structure
>pdb|3TW7|A Chain A, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a Crystallized Without Acetyl Coenzyme-A Length = 1165 Back     alignment and structure
>pdb|3TW7|A Chain A, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a Crystallized Without Acetyl Coenzyme-A Length = 1165 Back     alignment and structure
>pdb|2YL2|A Chain A, Crystal Structure Of Human Acetyl-Coa Carboxylase 1, Biotin Carboxylase (Bc) Domain Length = 540 Back     alignment and structure
>pdb|4HNU|A Chain A, Crystal Structure Of K442e Mutant Of S. Aureus Pyruvate Carboxylase Length = 1173 Back     alignment and structure
>pdb|4HNU|A Chain A, Crystal Structure Of K442e Mutant Of S. Aureus Pyruvate Carboxylase Length = 1173 Back     alignment and structure
>pdb|3BG5|A Chain A, Crystal Structure Of Staphylococcus Aureus Pyruvate Carboxylase Length = 1173 Back     alignment and structure
>pdb|3BG5|A Chain A, Crystal Structure Of Staphylococcus Aureus Pyruvate Carboxylase Length = 1173 Back     alignment and structure
>pdb|4HNT|A Chain A, Crystal Structure Of F403a Mutant Of S. Aureus Pyruvate Carboxylase Length = 1173 Back     alignment and structure
>pdb|4HNT|A Chain A, Crystal Structure Of F403a Mutant Of S. Aureus Pyruvate Carboxylase Length = 1173 Back     alignment and structure
>pdb|4HNV|A Chain A, Crystal Structure Of R54e Mutant Of S. Aureus Pyruvate Carboxylase Length = 1173 Back     alignment and structure
>pdb|4HNV|A Chain A, Crystal Structure Of R54e Mutant Of S. Aureus Pyruvate Carboxylase Length = 1173 Back     alignment and structure
>pdb|3HO8|A Chain A, Crystal Structure Of S. Aureus Pyruvate Carboxylase In Complex With Coenzyme A Length = 1150 Back     alignment and structure
>pdb|3HO8|A Chain A, Crystal Structure Of S. Aureus Pyruvate Carboxylase In Complex With Coenzyme A Length = 1150 Back     alignment and structure
>pdb|3HB9|A Chain A, Crystal Structure Of S. Aureus Pyruvate Carboxylase A610t Mutant Length = 1150 Back     alignment and structure
>pdb|3HB9|A Chain A, Crystal Structure Of S. Aureus Pyruvate Carboxylase A610t Mutant Length = 1150 Back     alignment and structure
>pdb|3HBL|A Chain A, Crystal Structure Of S. Aureus Pyruvate Carboxylase T908a Mutant Length = 1150 Back     alignment and structure
>pdb|3HBL|A Chain A, Crystal Structure Of S. Aureus Pyruvate Carboxylase T908a Mutant Length = 1150 Back     alignment and structure
>pdb|3N6R|A Chain A, Crystal Structure Of The Holoenzyme Of Propionyl-coa Carboxylase (pcc) Length = 681 Back     alignment and structure
>pdb|3N6R|A Chain A, Crystal Structure Of The Holoenzyme Of Propionyl-coa Carboxylase (pcc) Length = 681 Back     alignment and structure
>pdb|1W93|A Chain A, Crystal Structure Of Biotin Carboxylase Domain Of Acetyl- Coenzyme A Carboxylase From Saccharomyces Cerevisiae Length = 553 Back     alignment and structure
>pdb|1W96|A Chain A, Crystal Structure Of Biotin Carboxylase Domain Of Acetyl- Coenzyme A Carboxylase From Saccharomyces Cerevisiae In Complex With Soraphen A Length = 554 Back     alignment and structure
>pdb|2VPQ|A Chain A, Crystal Structure Of Biotin Carboxylase From S. Aureus Complexed With Amppnp Length = 451 Back     alignment and structure
>pdb|3G8D|A Chain A, Crystal Structure Of The Biotin Carboxylase Subunit, E296a Mutant, Of Acetyl-Coa Carboxylase From Escherichia Coli Length = 444 Back     alignment and structure
>pdb|2GPW|A Chain A, Crystal Structure Of The Biotin Carboxylase Subunit, F363a Mutant, Of Acetyl-Coa Carboxylase From Escherichia Coli. Length = 469 Back     alignment and structure
>pdb|3JZF|A Chain A, Crystal Structure Of Biotin Carboxylase From E. Coli In Complex With Benzimidazoles Series Length = 486 Back     alignment and structure
>pdb|1BNC|A Chain A, Three-Dimensional Structure Of The Biotin Carboxylase Subunit Of Acetyl-Coa Carboxylase Length = 449 Back     alignment and structure
>pdb|2GPS|A Chain A, Crystal Structure Of The Biotin Carboxylase Subunit, E23r Mutant, Of Acetyl-Coa Carboxylase From Escherichia Coli. Length = 469 Back     alignment and structure
>pdb|3G8C|A Chain A, Crystal Stucture Of Biotin Carboxylase In Complex With Biotin, Bicarbonate, Adp And Mg Ion Length = 444 Back     alignment and structure
>pdb|2HJW|A Chain A, Crystal Structure Of The Bc Domain Of Acc2 Length = 573 Back     alignment and structure
>pdb|3JRW|A Chain A, Phosphorylated Bc Domain Of Acc2 Length = 587 Back     alignment and structure
>pdb|3GID|A Chain A, The Biotin Carboxylase (Bc) Domain Of Human Acetyl-Coa Carboxylase 2 (Acc2) In Complex With Soraphen A Length = 540 Back     alignment and structure
>pdb|3JRX|A Chain A, Crystal Structure Of The Bc Domain Of Acc2 In Complex With Soraphen A Length = 587 Back     alignment and structure
>pdb|1DV2|A Chain A, The Structure Of Biotin Carboxylase, Mutant E288k, Complexed With Atp Length = 452 Back     alignment and structure
>pdb|3OUZ|A Chain A, Crystal Structure Of Biotin Carboxylase-Adp Complex From Campylobacter Jejuni Length = 446 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1190
1a9x_A1073 Carbamoyl phosphate synthetase (large chain); amid 0.0
4dim_A403 Phosphoribosylglycinamide synthetase; structural g 2e-78
4dim_A403 Phosphoribosylglycinamide synthetase; structural g 1e-64
3vmm_A474 Alanine-anticapsin ligase BACD; ATP-grAsp domain, 4e-73
3vmm_A474 Alanine-anticapsin ligase BACD; ATP-grAsp domain, 3e-46
2pn1_A331 Carbamoylphosphate synthase large subunit; ZP_0053 3e-52
2pn1_A331 Carbamoylphosphate synthase large subunit; ZP_0053 3e-45
2yvq_A143 Carbamoyl-phosphate synthase; conserved hypothetic 1e-44
2r85_A334 PURP protein PF1517; ATP-grAsp superfamily, unknow 3e-22
2r85_A334 PURP protein PF1517; ATP-grAsp superfamily, unknow 2e-20
2qf7_A1165 Pyruvate carboxylase protein; multi-domain, multi- 5e-15
2qf7_A 1165 Pyruvate carboxylase protein; multi-domain, multi- 2e-10
3hbl_A1150 Pyruvate carboxylase; TIM barrel, ligase; HET: BTI 1e-14
3hbl_A 1150 Pyruvate carboxylase; TIM barrel, ligase; HET: BTI 7e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-10
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
3df7_A305 Putative ATP-grAsp superfamily protein; putative p 5e-14
3df7_A305 Putative ATP-grAsp superfamily protein; putative p 1e-08
2dzd_A461 Pyruvate carboxylase; biotin carboxylase, ligase; 1e-13
2dzd_A461 Pyruvate carboxylase; biotin carboxylase, ligase; 6e-10
2vpq_A451 Acetyl-COA carboxylase; bacteria, ATP-grAsp domain 8e-12
2vpq_A451 Acetyl-COA carboxylase; bacteria, ATP-grAsp domain 2e-10
3jrx_A587 Acetyl-COA carboxylase 2; BC domain, soraphen A, a 8e-12
3jrx_A587 Acetyl-COA carboxylase 2; BC domain, soraphen A, a 4e-08
3glk_A540 Acetyl-COA carboxylase 2; ATP binding, alternative 2e-11
3glk_A540 Acetyl-COA carboxylase 2; ATP binding, alternative 1e-07
1w96_A554 ACC, acetyl-coenzyme A carboxylase; ligase, obesit 3e-11
1w96_A554 ACC, acetyl-coenzyme A carboxylase; ligase, obesit 4e-09
2w70_A449 Biotin carboxylase; ligase, ATP-binding, fatty aci 4e-11
2w70_A449 Biotin carboxylase; ligase, ATP-binding, fatty aci 5e-11
3ouz_A446 Biotin carboxylase; structural genomics, center fo 5e-11
3ouz_A446 Biotin carboxylase; structural genomics, center fo 1e-10
1ulz_A451 Pyruvate carboxylase N-terminal domain; biotin car 6e-11
1ulz_A451 Pyruvate carboxylase N-terminal domain; biotin car 2e-10
2r7k_A361 5-formaminoimidazole-4-carboxamide-1-(beta)-D- rib 1e-10
2dwc_A433 PH0318, 433AA long hypothetical phosphoribosylglyc 3e-10
3n6r_A 681 Propionyl-COA carboxylase, alpha subunit; protein 2e-09
3n6r_A681 Propionyl-COA carboxylase, alpha subunit; protein 2e-07
3va7_A 1236 KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A 2e-09
3va7_A 1236 KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A 2e-08
2cqy_A108 Propionyl-COA carboxylase alpha chain, mitochondri 6e-09
2cqy_A108 Propionyl-COA carboxylase alpha chain, mitochondri 3e-06
4eg0_A317 D-alanine--D-alanine ligase; structural genomics, 8e-09
3u9t_A 675 MCC alpha, methylcrotonyl-COA carboxylase, alpha-s 1e-08
3u9t_A675 MCC alpha, methylcrotonyl-COA carboxylase, alpha-s 2e-06
2pvp_A367 D-alanine-D-alanine ligase; 2.40A {Helicobacter py 1e-07
2pvp_A367 D-alanine-D-alanine ligase; 2.40A {Helicobacter py 4e-05
2i87_A364 D-alanine-D-alanine ligase; APO; 2.00A {Staphyloco 4e-07
1ehi_A377 LMDDL2, D-alanine:D-lactate ligase; ATP-binding. g 1e-06
3ln6_A750 Glutathione biosynthesis bifunctional protein GSH; 2e-06
3ln6_A750 Glutathione biosynthesis bifunctional protein GSH; 2e-05
2fb9_A322 D-alanine:D-alanine ligase; 1.90A {Thermus caldoph 5e-06
3tqt_A372 D-alanine--D-alanine ligase; cell envelope; 1.88A 7e-06
3ln7_A757 Glutathione biosynthesis bifunctional protein GSH; 9e-06
3r5x_A307 D-alanine--D-alanine ligase; alpha-beta structure, 3e-05
1uc8_A280 LYSX, lysine biosynthesis enzyme; alpha-aminoadipa 4e-05
1uc8_A280 LYSX, lysine biosynthesis enzyme; alpha-aminoadipa 3e-04
1b93_A152 Protein (methylglyoxal synthase); glycolytic bypas 5e-05
2pbz_A320 Hypothetical protein; NYSGXRC, PSI-II, IMP biosynt 8e-05
3aw8_A369 PURK, phosphoribosylaminoimidazole carboxylase, AT 2e-04
1wr2_A238 Hypothetical protein PH1789; structural genomics, 7e-04
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A* Length = 1073 Back     alignment and structure
 Score = 2039 bits (5285), Expect = 0.0
 Identities = 619/1086 (56%), Positives = 786/1086 (72%), Gaps = 23/1086 (2%)

Query: 88   KRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLAD 147
            KRTD++ ILILGAGPIVIGQACEFDYSG QACKAL+EEGY VI +NSNPATIMTDP +AD
Sbjct: 3    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMAD 62

Query: 148  RTYITPMTPELVEQVLEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDA 207
             TYI P+  E+V +++EKERPDA+LPTMGGQTALN A+ L   G LE++GV +IGA  DA
Sbjct: 63   ATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADA 122

Query: 208  IKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGI 267
            I KAEDR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGI
Sbjct: 123  IDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGI 181

Query: 268  AYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMG 327
            AYN+EEFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG
Sbjct: 182  AYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMG 241

Query: 328  VHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMN 387
            +HTGDSITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMN
Sbjct: 242  IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN 301

Query: 388  PRVSRSSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPR 446
            PRVSRSSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPR
Sbjct: 302  PRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPR 361

Query: 447  FAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSLECGFSGWGCSNVKELDWDW 506
            F FEKF G+   LTTQMKSVGE MA+GRT QES QKALR LE G +G+      +     
Sbjct: 362  FNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEAL 421

Query: 507  EQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFLLTQSV 566
             +++  L+    DR+  I  A + G+ VD +  L+ ID+WFL Q +EL+ +E+ +    +
Sbjct: 422  TKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGI 481

Query: 567  SNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTP 626
            + +  D   ++KR+GF+D ++A      E E+R+ R    + P YKRVDTCAAEF  +T 
Sbjct: 482  TGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTA 541

Query: 627  YMYSSYDFECESAP-TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNS 685
            YMYS+Y+ ECE+ P T ++K+++LGGGPNRIGQGIEFDYCC H S +L+  GYETIM+N 
Sbjct: 542  YMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC 601

Query: 686  NPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPEGIIVQFGGQTPLKLSLPIHQYLDEH 745
            NPETVSTDYDTSDRLYFEP+T+EDVL ++ +E+P+G+IVQ+GGQTPLKL+  +       
Sbjct: 602  NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALE------ 655

Query: 746  RLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALAIAKEI 805
                A+G   V + GTSPD+ID AEDRERF   ++ L ++QP      +   A+  AKEI
Sbjct: 656  ----AAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEI 708

Query: 806  GYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALA 865
            GYP+VVR SYVLGGRAMEIVY +  L  Y + AV V  + PVL+D +L DA+E+DVDA+ 
Sbjct: 709  GYPLVVRASYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAIC 768

Query: 866  DSCG-NVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLM 924
            D  G  V+IGGIMEHIEQAGVHSGDSAC +P  T+S    D +     KLA  L V GLM
Sbjct: 769  D--GEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLM 826

Query: 925  NCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIP 984
            N Q+A+  + +VYL+E NPRA+RTVPFVSKA G PLAK AA VM+GKSL + G TKEVIP
Sbjct: 827  NVQFAV-KNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIP 885

Query: 985  KHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPLSGTV 1044
             + SVKE VLPF KF G D LLGPEMRSTGEVMG+  +F  AFAKAQ+ +   +   G  
Sbjct: 886  PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRA 945

Query: 1045 FLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMV 1104
             LS+ +  K  +  +A   L  GF++ +T GTA  L   GI    V K+HEGRPH  D +
Sbjct: 946  LLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRI 1005

Query: 1105 ANGQIQMMVITSSGDSLDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTM 1164
             NG+   ++ T+SG      D   +RR  L YKV   TT++G  A A A+ +  +  V  
Sbjct: 1006 KNGEYTYIINTTSGRR-AIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKV-- 1062

Query: 1165 TALQDF 1170
             ++Q+ 
Sbjct: 1063 ISVQEM 1068
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} Length = 403 Back     alignment and structure
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} Length = 403 Back     alignment and structure
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis} Length = 474 Back     alignment and structure
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis} Length = 474 Back     alignment and structure
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum} Length = 331 Back     alignment and structure
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum} Length = 331 Back     alignment and structure
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens} Length = 143 Back     alignment and structure
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A* Length = 334 Back     alignment and structure
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A* Length = 334 Back     alignment and structure
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A* Length = 1165 Back     alignment and structure
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A* Length = 1165 Back     alignment and structure
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 3hb9_A* Length = 1150 Back     alignment and structure
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 3hb9_A* Length = 1150 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus} Length = 305 Back     alignment and structure
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus} Length = 305 Back     alignment and structure
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans} Length = 461 Back     alignment and structure
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans} Length = 461 Back     alignment and structure
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus} Length = 451 Back     alignment and structure
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus} Length = 451 Back     alignment and structure
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A* Length = 587 Back     alignment and structure
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A* Length = 587 Back     alignment and structure
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A Length = 540 Back     alignment and structure
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A Length = 540 Back     alignment and structure
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A Length = 554 Back     alignment and structure
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A Length = 554 Back     alignment and structure
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ... Length = 449 Back     alignment and structure
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ... Length = 449 Back     alignment and structure
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A* Length = 446 Back     alignment and structure
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A* Length = 446 Back     alignment and structure
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 Length = 451 Back     alignment and structure
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 Length = 451 Back     alignment and structure
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A* Length = 361 Back     alignment and structure
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* Length = 433 Back     alignment and structure
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi} Length = 681 Back     alignment and structure
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi} Length = 681 Back     alignment and structure
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis} Length = 1236 Back     alignment and structure
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis} Length = 1236 Back     alignment and structure
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 108 Back     alignment and structure
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 108 Back     alignment and structure
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A Length = 317 Back     alignment and structure
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori} Length = 367 Back     alignment and structure
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori} Length = 367 Back     alignment and structure
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A* Length = 364 Back     alignment and structure
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1 Length = 377 Back     alignment and structure
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V} Length = 750 Back     alignment and structure
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V} Length = 750 Back     alignment and structure
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A* Length = 322 Back     alignment and structure
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii} Length = 372 Back     alignment and structure
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida} Length = 757 Back     alignment and structure
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A* Length = 307 Back     alignment and structure
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A* Length = 280 Back     alignment and structure
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A* Length = 280 Back     alignment and structure
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A Length = 152 Back     alignment and structure
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9 Length = 320 Back     alignment and structure
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus} Length = 369 Back     alignment and structure
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii} Length = 238 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1190
1a9x_A1073 Carbamoyl phosphate synthetase (large chain); amid 100.0
1a9x_A 1073 Carbamoyl phosphate synthetase (large chain); amid 100.0
3ouz_A446 Biotin carboxylase; structural genomics, center fo 100.0
3q2o_A389 Phosphoribosylaminoimidazole carboxylase, ATPase; 100.0
3jrx_A587 Acetyl-COA carboxylase 2; BC domain, soraphen A, a 100.0
3glk_A540 Acetyl-COA carboxylase 2; ATP binding, alternative 100.0
3u9t_A675 MCC alpha, methylcrotonyl-COA carboxylase, alpha-s 100.0
4e4t_A419 Phosphoribosylaminoimidazole carboxylase, ATPase; 100.0
3q2o_A389 Phosphoribosylaminoimidazole carboxylase, ATPase; 100.0
1ulz_A451 Pyruvate carboxylase N-terminal domain; biotin car 100.0
2vpq_A451 Acetyl-COA carboxylase; bacteria, ATP-grAsp domain 100.0
3n6r_A681 Propionyl-COA carboxylase, alpha subunit; protein 100.0
2dzd_A461 Pyruvate carboxylase; biotin carboxylase, ligase; 100.0
4e4t_A419 Phosphoribosylaminoimidazole carboxylase, ATPase; 100.0
2w70_A449 Biotin carboxylase; ligase, ATP-binding, fatty aci 100.0
3va7_A 1236 KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A 100.0
3k5i_A403 Phosphoribosyl-aminoimidazole carboxylase; purine 100.0
3k5i_A403 Phosphoribosyl-aminoimidazole carboxylase; purine 100.0
3hbl_A1150 Pyruvate carboxylase; TIM barrel, ligase; HET: BTI 100.0
3orq_A377 N5-carboxyaminoimidazole ribonucleotide synthetas; 100.0
3ouz_A446 Biotin carboxylase; structural genomics, center fo 100.0
3eth_A355 Phosphoribosylaminoimidazole carboxylase ATPase su 100.0
4dim_A403 Phosphoribosylglycinamide synthetase; structural g 100.0
3orq_A377 N5-carboxyaminoimidazole ribonucleotide synthetas; 100.0
1w96_A554 ACC, acetyl-coenzyme A carboxylase; ligase, obesit 100.0
3jrx_A587 Acetyl-COA carboxylase 2; BC domain, soraphen A, a 100.0
3glk_A540 Acetyl-COA carboxylase 2; ATP binding, alternative 100.0
4ffl_A363 PYLC; amino acid, biosynthesis of pyrrolysine, iso 100.0
3vot_A425 L-amino acid ligase, BL00235; ATP-grAsp motif, ATP 100.0
3eth_A355 Phosphoribosylaminoimidazole carboxylase ATPase su 100.0
3ax6_A380 Phosphoribosylaminoimidazole carboxylase, ATPase; 100.0
2qf7_A1165 Pyruvate carboxylase protein; multi-domain, multi- 100.0
3aw8_A369 PURK, phosphoribosylaminoimidazole carboxylase, AT 100.0
3aw8_A369 PURK, phosphoribosylaminoimidazole carboxylase, AT 100.0
1kjq_A391 GART 2, phosphoribosylglycinamide formyltransferas 100.0
1ulz_A451 Pyruvate carboxylase N-terminal domain; biotin car 100.0
2dzd_A461 Pyruvate carboxylase; biotin carboxylase, ligase; 100.0
1kjq_A391 GART 2, phosphoribosylglycinamide formyltransferas 100.0
2vpq_A451 Acetyl-COA carboxylase; bacteria, ATP-grAsp domain 100.0
3u9t_A675 MCC alpha, methylcrotonyl-COA carboxylase, alpha-s 100.0
3ax6_A380 Phosphoribosylaminoimidazole carboxylase, ATPase; 100.0
2w70_A449 Biotin carboxylase; ligase, ATP-binding, fatty aci 100.0
2dwc_A433 PH0318, 433AA long hypothetical phosphoribosylglyc 100.0
2dwc_A433 PH0318, 433AA long hypothetical phosphoribosylglyc 100.0
4dim_A403 Phosphoribosylglycinamide synthetase; structural g 100.0
3n6r_A 681 Propionyl-COA carboxylase, alpha subunit; protein 100.0
3lp8_A442 Phosphoribosylamine-glycine ligase; ssgcid, NIH, n 100.0
3mjf_A431 Phosphoribosylamine--glycine ligase; structural ge 100.0
4ffl_A363 PYLC; amino acid, biosynthesis of pyrrolysine, iso 100.0
3vot_A425 L-amino acid ligase, BL00235; ATP-grAsp motif, ATP 100.0
1vkz_A412 Phosphoribosylamine--glycine ligase; TM1250, struc 100.0
3hbl_A 1150 Pyruvate carboxylase; TIM barrel, ligase; HET: BTI 100.0
3va7_A 1236 KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A 100.0
1vkz_A412 Phosphoribosylamine--glycine ligase; TM1250, struc 100.0
2ip4_A417 PURD, phosphoribosylamine--glycine ligase; GAR syn 100.0
2ip4_A417 PURD, phosphoribosylamine--glycine ligase; GAR syn 100.0
2yrx_A451 Phosphoribosylglycinamide synthetase; glycinamide 100.0
2z04_A365 Phosphoribosylaminoimidazole carboxylase ATPase su 100.0
2yrx_A451 Phosphoribosylglycinamide synthetase; glycinamide 100.0
3mjf_A431 Phosphoribosylamine--glycine ligase; structural ge 100.0
2yw2_A424 Phosphoribosylamine--glycine ligase; glycinamide r 100.0
1w96_A554 ACC, acetyl-coenzyme A carboxylase; ligase, obesit 100.0
4fu0_A357 D-alanine--D-alanine ligase 7; vancomycin resistan 100.0
3lp8_A442 Phosphoribosylamine-glycine ligase; ssgcid, NIH, n 100.0
2qk4_A452 Trifunctional purine biosynthetic protein adenosi; 100.0
2qk4_A452 Trifunctional purine biosynthetic protein adenosi; 100.0
2z04_A365 Phosphoribosylaminoimidazole carboxylase ATPase su 100.0
2yw2_A424 Phosphoribosylamine--glycine ligase; glycinamide r 100.0
2qf7_A 1165 Pyruvate carboxylase protein; multi-domain, multi- 100.0
2xcl_A422 Phosphoribosylamine--glycine ligase; GAR-SYN, ATP- 100.0
4eg0_A317 D-alanine--D-alanine ligase; structural genomics, 100.0
2xcl_A422 Phosphoribosylamine--glycine ligase; GAR-SYN, ATP- 100.0
1ehi_A377 LMDDL2, D-alanine:D-lactate ligase; ATP-binding. g 100.0
1e4e_A343 Vancomycin/teicoplanin A-type resistance protein; 100.0
4fu0_A357 D-alanine--D-alanine ligase 7; vancomycin resistan 100.0
2i87_A364 D-alanine-D-alanine ligase; APO; 2.00A {Staphyloco 100.0
3tqt_A372 D-alanine--D-alanine ligase; cell envelope; 1.88A 100.0
3k3p_A383 D-alanine--D-alanine ligase; D-alanyl-alanine synt 100.0
3e5n_A386 D-alanine-D-alanine ligase A; bacterial blight; 2. 100.0
3i12_A364 D-alanine-D-alanine ligase A; D-alanyl-alanine syn 100.0
3vmm_A474 Alanine-anticapsin ligase BACD; ATP-grAsp domain, 100.0
2fb9_A322 D-alanine:D-alanine ligase; 1.90A {Thermus caldoph 100.0
3lwb_A373 D-alanine--D-alanine ligase; DDL, D-alanyl--D-alan 100.0
3se7_A346 VANA; alpha-beta structure, D-alanine-D-lactate li 100.0
2pn1_A331 Carbamoylphosphate synthase large subunit; ZP_0053 100.0
1ehi_A377 LMDDL2, D-alanine:D-lactate ligase; ATP-binding. g 100.0
2pn1_A331 Carbamoylphosphate synthase large subunit; ZP_0053 100.0
1e4e_A343 Vancomycin/teicoplanin A-type resistance protein; 100.0
1iow_A306 DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen pho 100.0
2i87_A364 D-alanine-D-alanine ligase; APO; 2.00A {Staphyloco 100.0
2pvp_A367 D-alanine-D-alanine ligase; 2.40A {Helicobacter py 100.0
3r5x_A307 D-alanine--D-alanine ligase; alpha-beta structure, 100.0
4eg0_A317 D-alanine--D-alanine ligase; structural genomics, 99.98
3vmm_A474 Alanine-anticapsin ligase BACD; ATP-grAsp domain, 99.97
3tqt_A372 D-alanine--D-alanine ligase; cell envelope; 1.88A 99.97
3se7_A346 VANA; alpha-beta structure, D-alanine-D-lactate li 99.97
3k3p_A383 D-alanine--D-alanine ligase; D-alanyl-alanine synt 99.97
1iow_A306 DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen pho 99.97
2pvp_A367 D-alanine-D-alanine ligase; 2.40A {Helicobacter py 99.97
3lwb_A373 D-alanine--D-alanine ligase; DDL, D-alanyl--D-alan 99.97
3e5n_A386 D-alanine-D-alanine ligase A; bacterial blight; 2. 99.97
3i12_A364 D-alanine-D-alanine ligase A; D-alanyl-alanine syn 99.97
2fb9_A322 D-alanine:D-alanine ligase; 1.90A {Thermus caldoph 99.96
3r5x_A307 D-alanine--D-alanine ligase; alpha-beta structure, 99.96
2yvq_A143 Carbamoyl-phosphate synthase; conserved hypothetic 99.96
1uc8_A280 LYSX, lysine biosynthesis enzyme; alpha-aminoadipa 99.95
1uc8_A280 LYSX, lysine biosynthesis enzyme; alpha-aminoadipa 99.95
2r85_A334 PURP protein PF1517; ATP-grAsp superfamily, unknow 99.94
2r7k_A361 5-formaminoimidazole-4-carboxamide-1-(beta)-D- rib 99.94
2r85_A334 PURP protein PF1517; ATP-grAsp superfamily, unknow 99.93
2r7k_A361 5-formaminoimidazole-4-carboxamide-1-(beta)-D- rib 99.93
2pbz_A320 Hypothetical protein; NYSGXRC, PSI-II, IMP biosynt 99.92
2pbz_A320 Hypothetical protein; NYSGXRC, PSI-II, IMP biosynt 99.9
3df7_A305 Putative ATP-grAsp superfamily protein; putative p 99.89
1b93_A152 Protein (methylglyoxal synthase); glycolytic bypas 99.88
1vmd_A178 MGS, methylglyoxal synthase; TM1185, structural ge 99.88
3df7_A305 Putative ATP-grAsp superfamily protein; putative p 99.88
1gsa_A316 Glutathione synthetase; ligase; HET: ADP GSH; 2.00 99.87
2xw6_A134 MGS, methylglyoxal synthase; lyase; 1.08A {Thermus 99.87
1gsa_A316 Glutathione synthetase; ligase; HET: ADP GSH; 2.00 99.84
1z2n_X324 Inositol 1,3,4-trisphosphate 5/6-kinase; inositol 99.81
1z2n_X324 Inositol 1,3,4-trisphosphate 5/6-kinase; inositol 99.8
3ln7_A757 Glutathione biosynthesis bifunctional protein GSH; 99.76
3ln7_A757 Glutathione biosynthesis bifunctional protein GSH; 99.75
3ln6_A750 Glutathione biosynthesis bifunctional protein GSH; 99.74
3ln6_A750 Glutathione biosynthesis bifunctional protein GSH; 99.72
2q7d_A346 Inositol-tetrakisphosphate 1-kinase; inositol kina 99.71
1wr2_A238 Hypothetical protein PH1789; structural genomics, 99.69
2q7d_A346 Inositol-tetrakisphosphate 1-kinase; inositol kina 99.67
2p0a_A344 Synapsin-3, synapsin III; neurotransmitter release 99.63
1wr2_A238 Hypothetical protein PH1789; structural genomics, 99.63
1i7n_A309 Synapsin II; synapse, phosphorylation, neuropeptid 99.63
1pk8_A422 RAT synapsin I; ATP binding, ATP grAsp, calcium (I 99.62
1i7n_A309 Synapsin II; synapse, phosphorylation, neuropeptid 99.59
1pk8_A422 RAT synapsin I; ATP binding, ATP grAsp, calcium (I 99.58
2p0a_A344 Synapsin-3, synapsin III; neurotransmitter release 99.56
2cqy_A108 Propionyl-COA carboxylase alpha chain, mitochondri 99.5
2cqy_A108 Propionyl-COA carboxylase alpha chain, mitochondri 99.48
2nu8_B388 SCS-beta, succinyl-COA synthetase beta chain; citr 99.47
2fp4_B395 Succinyl-COA ligase [GDP-forming] beta-chain, mito 99.41
2nu8_B388 SCS-beta, succinyl-COA synthetase beta chain; citr 99.32
3t7a_A330 Inositol pyrophosphate kinase; ATP-grAsp fold, tra 99.27
2fp4_B395 Succinyl-COA ligase [GDP-forming] beta-chain, mito 99.25
3t7a_A330 Inositol pyrophosphate kinase; ATP-grAsp fold, tra 99.23
3ufx_B397 Succinyl-COA synthetase beta subunit; ATP-grAsp fo 98.9
3ufx_B397 Succinyl-COA synthetase beta subunit; ATP-grAsp fo 98.88
1zcz_A 464 Bifunctional purine biosynthesis protein PURH; TM1 98.27
3mwd_A425 ATP-citrate synthase; ATP-grAsp, phosphohistidine, 97.6
1g8m_A 593 Aicar transformylase-IMP cyclohydrolase; homodimer 97.52
3pff_A 829 ATP-citrate synthase; phosphohistidine, organic ac 97.47
3tig_A380 TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Si 97.45
4ehi_A 534 Bifunctional purine biosynthesis protein PURH; str 97.21
3tig_A380 TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Si 97.13
3mwd_A425 ATP-citrate synthase; ATP-grAsp, phosphohistidine, 97.02
3zzm_A 523 Bifunctional purine biosynthesis protein PURH; tra 97.0
3pff_A829 ATP-citrate synthase; phosphohistidine, organic ac 96.69
2g1u_A155 Hypothetical protein TM1088A; structural genomics, 95.69
3fwz_A140 Inner membrane protein YBAL; TRKA-N domain, E.coli 95.4
3llv_A141 Exopolyphosphatase-related protein; NAD(P)-binding 94.91
3l9w_A413 Glutathione-regulated potassium-efflux system Pro 94.81
3ic5_A118 Putative saccharopine dehydrogenase; structural ge 94.52
3fwz_A140 Inner membrane protein YBAL; TRKA-N domain, E.coli 94.04
2g1u_A155 Hypothetical protein TM1088A; structural genomics, 93.75
2r6j_A318 Eugenol synthase 1; phenylpropene, PIP reductase, 93.64
3keo_A212 Redox-sensing transcriptional repressor REX; DNA b 93.57
2hmt_A144 YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane 93.49
3qvo_A236 NMRA family protein; structural genomics, PSI-biol 93.41
3llv_A141 Exopolyphosphatase-related protein; NAD(P)-binding 93.4
2hmt_A144 YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane 93.35
1hdo_A206 Biliverdin IX beta reductase; foetal metabolism, H 93.13
3i6i_A346 Putative leucoanthocyanidin reductase 1; rossmann 93.07
3ic5_A118 Putative saccharopine dehydrogenase; structural ge 92.93
2dt5_A211 AT-rich DNA-binding protein; REX, NADH, NAD, rossm 92.74
1lss_A140 TRK system potassium uptake protein TRKA homolog; 91.86
3r6d_A221 NAD-dependent epimerase/dehydratase; structural ge 91.82
1id1_A153 Putative potassium channel protein; RCK domain, E. 91.73
3l9w_A413 Glutathione-regulated potassium-efflux system Pro 91.46
3nkl_A141 UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fo 91.24
3c85_A183 Putative glutathione-regulated potassium-efflux S 91.08
1id1_A153 Putative potassium channel protein; RCK domain, E. 90.55
2pzm_A330 Putative nucleotide sugar epimerase/ dehydratase; 90.26
3dhn_A227 NAD-dependent epimerase/dehydratase; reductase, PF 90.21
2vt3_A215 REX, redox-sensing transcriptional repressor REX; 90.2
2duw_A145 Putative COA-binding protein; ligand binding prote 90.09
2duw_A145 Putative COA-binding protein; ligand binding prote 90.08
3abi_A365 Putative uncharacterized protein PH1688; L-lysine 89.72
4b4k_A181 N5-carboxyaminoimidazole ribonucleotide mutase; is 89.7
3nkl_A141 UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fo 89.65
1hdo_A206 Biliverdin IX beta reductase; foetal metabolism, H 89.59
3qvo_A236 NMRA family protein; structural genomics, PSI-biol 89.2
2aef_A234 Calcium-gated potassium channel MTHK; rossmann fol 88.68
3c85_A183 Putative glutathione-regulated potassium-efflux S 87.67
3l4b_C218 TRKA K+ channel protien TM1088B; potassium channel 87.52
1lnq_A336 MTHK channels, potassium channel related protein; 87.28
3r6d_A221 NAD-dependent epimerase/dehydratase; structural ge 87.17
3orf_A251 Dihydropteridine reductase; alpha-beta-alpha sandw 87.1
4id9_A347 Short-chain dehydrogenase/reductase; putative dehy 87.04
3orf_A251 Dihydropteridine reductase; alpha-beta-alpha sandw 86.88
2gas_A307 Isoflavone reductase; NADPH-dependent reductase, o 86.88
1qyc_A308 Phenylcoumaran benzylic ether reductase PT1; NADPH 86.87
4gx0_A565 TRKA domain protein; membrane protein, ION channel 86.81
1lss_A140 TRK system potassium uptake protein TRKA homolog; 86.27
3gpi_A286 NAD-dependent epimerase/dehydratase; structural ge 86.18
3vtz_A269 Glucose 1-dehydrogenase; rossmann fold, oxidoreduc 85.83
2we8_A386 Xanthine dehydrogenase; oxidoreductase; 2.30A {Myc 85.74
3l4b_C218 TRKA K+ channel protien TM1088B; potassium channel 85.71
3dfu_A232 Uncharacterized protein from 6-phosphogluconate de 85.6
1y81_A138 Conserved hypothetical protein; hyperthermophIle, 85.45
3c1o_A321 Eugenol synthase; phenylpropene, PIP reductase, sh 85.33
3n6x_A474 Putative glutathionylspermidine synthase; domain o 85.32
3dqp_A219 Oxidoreductase YLBE; alpha-beta protein., structur 85.24
2pzm_A330 Putative nucleotide sugar epimerase/ dehydratase; 85.11
1n7h_A381 GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, 84.86
4g6h_A502 Rotenone-insensitive NADH-ubiquinone oxidoreducta 84.67
3tpc_A257 Short chain alcohol dehydrogenase-related dehydro; 84.64
3s2u_A365 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape 84.61
3p19_A266 BFPVVD8, putative blue fluorescent protein; rossma 84.58
4egb_A346 DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce 84.56
2c20_A330 UDP-glucose 4-epimerase; carbohydrate metabolism, 84.51
2c5a_A379 GDP-mannose-3', 5'-epimerase; short chain dehydrat 84.43
2wm3_A299 NMRA-like family domain containing protein 1; unkn 84.39
4id9_A347 Short-chain dehydrogenase/reductase; putative dehy 84.35
3dhn_A227 NAD-dependent epimerase/dehydratase; reductase, PF 84.31
3i6i_A346 Putative leucoanthocyanidin reductase 1; rossmann 84.16
3m2p_A311 UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J 84.14
4grd_A173 N5-CAIR mutase, phosphoribosylaminoimidazole carbo 84.11
1rpn_A335 GDP-mannose 4,6-dehydratase; short-chain dehydroge 83.97
2q1w_A333 Putative nucleotide sugar epimerase/ dehydratase; 83.95
3sxp_A362 ADP-L-glycero-D-mannoheptose-6-epimerase; rossman 83.93
2yy7_A312 L-threonine dehydrogenase; thermolabIle, flavobact 83.82
3enk_A341 UDP-glucose 4-epimerase; seattle structural genomi 83.69
2io8_A619 Bifunctional glutathionylspermidine synthetase/ami 83.51
1qyd_A313 Pinoresinol-lariciresinol reductase; NADPH-depende 83.5
2z1m_A345 GDP-D-mannose dehydratase; short-chain dehydrogena 83.5
3vtz_A269 Glucose 1-dehydrogenase; rossmann fold, oxidoreduc 83.44
2jl1_A287 Triphenylmethane reductase; oxidoreductase, biorem 83.19
1y81_A138 Conserved hypothetical protein; hyperthermophIle, 83.1
2pk3_A321 GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor 83.05
2fwm_X250 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e 82.89
3un1_A260 Probable oxidoreductase; structural genomics, PSI- 82.79
4ina_A405 Saccharopine dehydrogenase; structural genomics, P 82.78
2ydy_A315 Methionine adenosyltransferase 2 subunit beta; oxi 82.61
1uay_A242 Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid 82.51
2dtx_A264 Glucose 1-dehydrogenase related protein; rossmann 82.51
4b79_A242 PA4098, probable short-chain dehydrogenase; oxidor 82.44
2d59_A144 Hypothetical protein PH1109; COA binding, structur 82.41
3ff4_A122 Uncharacterized protein; structural genomics, PSI- 82.24
3e8x_A236 Putative NAD-dependent epimerase/dehydratase; stru 82.15
3dqp_A219 Oxidoreductase YLBE; alpha-beta protein., structur 81.96
2d59_A144 Hypothetical protein PH1109; COA binding, structur 81.92
3slg_A372 PBGP3 protein; structural genomics, seattle struct 81.88
3abi_A365 Putative uncharacterized protein PH1688; L-lysine 81.8
1rkx_A357 CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 81.37
3d7l_A202 LIN1944 protein; APC89317, structural genomics, PS 81.33
2nm0_A253 Probable 3-oxacyl-(acyl-carrier-protein) reductas; 81.24
4eez_A348 Alcohol dehydrogenase 1; site-saturation mutagenes 81.23
3ff4_A122 Uncharacterized protein; structural genomics, PSI- 81.19
3rft_A267 Uronate dehydrogenase; apoenzyme, rossmann fold, N 80.83
2io8_A619 Bifunctional glutathionylspermidine synthetase/ami 80.73
1t2a_A375 GDP-mannose 4,6 dehydratase; structural genomics c 80.66
4g65_A461 TRK system potassium uptake protein TRKA; structur 80.51
1dhr_A241 Dihydropteridine reductase; oxidoreductase(acting 80.19
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-181  Score=1769.40  Aligned_cols=1065  Identities=58%  Similarity=0.929  Sum_probs=1000.6

Q ss_pred             CCCCCCCCEEEEEcCCccccccccccchHHHHHHHHHHHCCCeEEEEccCCCCCCCCccCcceEEECCCCHHHHHHHHHH
Q 001014           86 LGKRTDLRKILILGAGPIVIGQACEFDYSGTQACKALKEEGYEVILINSNPATIMTDPGLADRTYITPMTPELVEQVLEK  165 (1190)
Q Consensus        86 m~~~~~~~kVLIiG~G~~~ig~~~E~d~sg~~~~~al~~~G~~vi~v~~~~~~~~~~~~~ad~~~i~p~~~~~v~~i~~~  165 (1190)
                      ||++.+++||||+|+|+++|||++||||||++++++|+++|++|+++++++++.+++..++|..|+.|.+.+.+.+++++
T Consensus         1 m~~~~~~~kIlIig~G~i~ig~a~E~d~sg~~~~~al~~~G~~vv~v~~~~~~~~~~~~~ad~~~i~p~~~e~i~~i~~~   80 (1073)
T 1a9x_A            1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEK   80 (1073)
T ss_dssp             CCCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEECSCCCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCcccccccccccchHHHHHHHHHHcCCEEEEEeCCcccccCChhhCcEEEECCCCHHHHHHHHHH
Confidence            78888899999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             cCCCEEEecCCChhHHHHHHHHHHhhHHHHcCCcEeCCcHHHHHHHhcHHHHHHHHHHcCCCCCCeeecCCHHHHHHHHH
Q 001014          166 ERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKTIGVKTPPSGIGNTLDECISIAN  245 (1190)
Q Consensus       166 ~~~d~Vip~~~g~~~~~~~~~l~~~~~le~~gi~~~G~~~~~i~~~~DK~~~k~~l~~~Gipvp~~~~v~s~~e~~~~~~  245 (1190)
                      +++|+|+|+++++++++.+..++++++|+++|++++|+++++++.+.||..++++|+++|+|+|++..+++.+++.++++
T Consensus        81 ~~~D~V~p~~g~~~~l~~~~~l~~~~~le~~gv~~~G~~~~ai~~~~DK~~~k~~l~~~Gipvp~~~~v~~~~ea~~~~~  160 (1073)
T 1a9x_A           81 ERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAA  160 (1073)
T ss_dssp             HCCSEEECSSSHHHHHHHHHHHHHTTHHHHHTCEECSSCHHHHHHHHSHHHHHHHHHHTTCCCCSEEEESSHHHHHHHHH
T ss_pred             hCCCEEEeccCCchHHHHHHHHHHhhHHHHcCCeeeCCCHHHHHHhhCHHHHHHHHHHCCcCCCCEEEECCHHHHHHHHH
Confidence            99999999999999999999999889999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCcEEEecCCCCCCcceEEeCCHHHHHHHHHHHHhcCCCCcEEEeeecCCCeeeeEEEEEeCCCcEEEEEeeeeeCC
Q 001014          246 EIGEFPLIIRPAFTLGGTGGGIAYNKEEFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDP  325 (1190)
Q Consensus       246 ~ig~~PvVVKP~~g~gg~Gv~iv~~~~el~~~~~~~~~~~~~~~vlVEe~I~G~~E~sv~v~~d~~g~~~~~~~~e~~~~  325 (1190)
                      ++| ||+||||.++.||+|+.+++|.+||.+++..++..++.++++||+||+||+|+++++++|.+|+++.+|.++++++
T Consensus       161 ~ig-~PvVvKp~~~~Gg~Gv~iv~~~eel~~~~~~~~~~~~~~~vlvEe~I~G~~E~~v~v~~d~~g~~v~~~~~e~~dp  239 (1073)
T 1a9x_A          161 DVG-FPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDA  239 (1073)
T ss_dssp             HHC-SSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHHCTTSCEEEEECCTTSEEEEEEEEECTTCCEEEEEEEEESSC
T ss_pred             HcC-CCEEEEECCCCCCCceEEeCCHHHHHHHHHHHHhhCCCCcEEEEEccCCCeEEEEEEEEeCCCCEEEEEEEecccC
Confidence            999 9999999999999999999999999999998887776779999999999999999999999999999999999999


Q ss_pred             CCcccccEEEEecCCCCCHHHHHHHHHHHHHHHHHhCCccceEEEEEEEecCCCcEEEEEeCCCCCCchHHHHHHhCCCH
Q 001014          326 MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPI  405 (1190)
Q Consensus       326 ~g~~~g~~~~~~Pa~~l~~~~~~~l~~~a~~i~~~lg~~~G~~~vef~~~~~~g~~~viEiNpR~~gs~~l~~~atG~~l  405 (1190)
                      .++|+|+++..+|+++++++.++++++.+.++++++|+++|++|+||++++++|++||||||||+++++.+++++||+|+
T Consensus       240 ~~v~~g~s~~~~Pa~~l~~~~~~~l~~~a~~i~~~lg~~~G~~~vdf~~~~~~g~~~viEiNpR~~~ss~l~~~atG~~l  319 (1073)
T 1a9x_A          240 MGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPI  319 (1073)
T ss_dssp             TTSCGGGSCEEESCCSCCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEECTTTCCEEEEEEESSCCHHHHHHHHHHSCCH
T ss_pred             CccccCcEEEEecCCCCCHHHHHHHHHHHHHHHHHcCcccCceEEEEEEECCCCCEEEEEecCCCCccHHHHHHHhCCCH
Confidence            99999999999999889999999999999999999999669999999999867899999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCccccCC-CCccccCCcCeEEeeeceeeecccCCCCcccCCCCCcEEEEEEEeCCHHHHHHHHH
Q 001014          406 AKMAAKLSVGYSLDQIPNDITKK-TPASFEPSIDYVVTKIPRFAFEKFPGSEPLLTTQMKSVGEAMALGRTFQESFQKAL  484 (1190)
Q Consensus       406 ~~~~~~~alG~~l~~~~~~i~~~-~~~~f~p~~~~v~~k~p~~~~~~~~~~~~~l~~~~~s~G~v~a~G~~~~ea~~ka~  484 (1190)
                      ++.++++++|++++++.+++++. +++.|+|..+++++++|+|+|++|++.+.+++++|+++|+||++|+|++||++||.
T Consensus       320 ~~~~~~~a~G~~l~~~~~~i~~~~~~a~f~p~~~~v~~~ip~~~~~~~~~~~~~~~~~~~~~G~v~~~g~~~~ea~~ka~  399 (1073)
T 1a9x_A          320 AKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKAL  399 (1073)
T ss_dssp             HHHHHHHHTTCCGGGSBCTTTTTCSBSCSCCBCSSEEEEEEECCGGGCTTSCCBCCSSCCCCEEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHcCCChHHhhccccCccCHHHcccCCCcEEEEcccccccccCCCCcccCCCccCcEEEEEEcCCHHHHHHHHH
Confidence            99999999999999999999887 88999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhcCccCCCCCCCCCCCCC---HHHHHhHhcCCCchhHHHHHHHHHCCCChHHHHhhhCCCHHHHHHHHHHHHHHHHH
Q 001014          485 RSLECGFSGWGCSNVKELDWD---WEQLKYSLRVPNPDRMQAIYAAMKKGMKVDEIHELSFIDKWFLTQFKELIDVEQFL  561 (1190)
Q Consensus       485 ~~l~~~~~g~~~~~~~~~~~~---~~~l~~~l~~~~~~r~~~~~~a~~~g~~~~~~~~~t~i~~~~~~~~~~~~~~~~~~  561 (1190)
                      ++++.++.|+..+ +.  ..+   .++|.+.|++|+++|+|++++|||+|+|+|+|+++|+||+|||+||++|+++|++|
T Consensus       400 ~~l~~~~~g~~~~-~~--~~~~~~~~~~~~~l~~~~~~r~~~~~~a~~~g~~~~~~~~~~~i~~~f~~~~~~~~~~~~~~  476 (1073)
T 1a9x_A          400 RGLEVGATGFDPK-VS--LDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKV  476 (1073)
T ss_dssp             HHSSSSCSSSCCS-SC--TTCTTHHHHHHHHHHTCBTTHHHHHHHHHHTTBCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred             HhhcccccCcCcc-cc--ccccccHHHHHHHHhCCCccHHHHHHHHHHcCCCHHHHHHhhccCHHHHHHHHHHHHHHHHH
Confidence            9999888898632 11  222   57899999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCCCCCCHHHHHHHHhcCCCHHHHHHHhCCCHHHHHHHHHhcCCcceEEEccCCCCccCCCCCceEeeccccCCCCC-
Q 001014          562 LTQSVSNMTKDDFYEVKRRGFSDKQIAFATKSTEKEVREKRLSLGVIPSYKRVDTCAAEFEANTPYMYSSYDFECESAP-  640 (1190)
Q Consensus       562 ~~~~~~~~~~~~l~~~k~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~a~e~~~~~~~~y~~~~~~~~~~~-  640 (1190)
                      +...+..++.+.|++||++||||.|||++|+.++.+||++|+++||.|+||+||||||||+|.||||||||+.++|..+ 
T Consensus       477 ~~~~~~~~~~~~~~~~k~~gf~d~~ia~~~~~~~~~~~~~r~~~~~~~~~k~vd~~a~e~~~~t~y~y~~y~~~~~~~~~  556 (1073)
T 1a9x_A          477 AEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPS  556 (1073)
T ss_dssp             HHHTGGGCCHHHHHHHHHTTCCHHHHHHHTTSCHHHHHHHHHHTTCCCEEEECCSBTTSSCCCCEEEEEESCSCCCCCCC
T ss_pred             HhcCCCCCCHHHHHHHHHcCCCHHHHHHHhCCCHHHHHHHHHHcCCCceEEEeCCccccCcCCCceEEEEECCCcccccc
Confidence            8654445789999999999999999999999999999999999999999999999999999999999999999999888 


Q ss_pred             CCCcEEEEECCCCcccCCCcccchhHHHHHHHHHhCCCeEEEecCCCCCcCccccCCcceeecCCcHHHHHHHhhhcCCC
Q 001014          641 TQKKKVLILGGGPNRIGQGIEFDYCCCHTSFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPE  720 (1190)
Q Consensus       641 ~~~~kVlIlG~G~~rig~~~efd~~~~~~~~al~~~G~~vi~v~~~p~~~s~~~~~ad~~~~~p~~~e~v~~i~~~~~~d  720 (1190)
                      ++++||||||+|++|||||+|||||+++++++|+++|++++++++||++++++++.+|++|++|.+.++++++++.+++|
T Consensus       557 ~~~~kVlVlG~G~~riG~~~Efd~~~~~~~~al~~~G~~vi~v~~np~~~s~~~~~ad~~~~~p~~~e~v~~i~~~e~~d  636 (1073)
T 1a9x_A          557 TDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPK  636 (1073)
T ss_dssp             SSSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEECCCCSHHHHHHHHHHHCCS
T ss_pred             ccCcEEEEecCCccccccccccchhHHHHHHHHHhcCCEEEEEecCCcccccccccccEEEeccchhhhhhhhhhhcCcc
Confidence            78899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCchhhhhhhhHHhhhccCCCcccCCCCceEEccCCHHHHhhccCHHHHHHHHHHcCCCCCCceeecCHHHHHH
Q 001014          721 GIIVQFGGQTPLKLSLPIHQYLDEHRLPSASGDGLVRIWGTSPDSIDAAEDRERFNAIIKELSIEQPKGGIAKSEADALA  800 (1190)
Q Consensus       721 ~Vi~~~g~~~~~~la~~l~~~l~~~~~l~~~G~~~i~~~g~~~~~i~~~~DK~~~~~~l~~~gIp~p~~~~~~s~~e~~~  800 (1190)
                      +|++.++++.++.++..|+          +.|   ++++|++++++++++||..++++|+++|||+|++..+.+.+++.+
T Consensus       637 ~Vi~~~g~~~~~~la~~Le----------~~G---i~i~G~~~~ai~~~~DK~~~~~ll~~~GIp~P~~~~~~s~eea~~  703 (1073)
T 1a9x_A          637 GVIVQYGGQTPLKLARALE----------AAG---VPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVE  703 (1073)
T ss_dssp             EEECSSSTHHHHTTHHHHH----------HTT---CCBCSSCHHHHHHHHSHHHHHHHHHHHTCCCCCEEECCSHHHHHH
T ss_pred             eEEeecCCchHHHHHHHHH----------HCC---CCeeCCCHHHHHHhhCHHHHHHHHHHcCcCCCCceEECCHHHHHH
Confidence            9999999998889999998          899   999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCcEEEecCcCCCCcceEEeCCHHHHHHHHHHhHhhCCCCcEEEEEecCCcceEEEeEEecCCCcEEEEeeeeee
Q 001014          801 IAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYLSDAIEIDVDALADSCGNVVIGGIMEHI  880 (1190)
Q Consensus       801 ~~~~igyPvvvKP~~~~gg~Gv~iv~~~~el~~~~~~~~~~~~~~~vliEefI~~g~E~~v~v~~d~~G~v~~~~i~e~~  880 (1190)
                      +++++|||+||||++++||+||.+|+|.+||.++++.+...++..+++||+||++.+|++|++++|+. .+++.++++|+
T Consensus       704 ~~~~ig~PvvVKP~~~~gG~Gv~iv~~~~el~~~~~~a~~~~~~~~vlvEefI~g~~E~~V~~l~d~~-~v~~~~i~e~~  782 (1073)
T 1a9x_A          704 KAKEIGYPLVVRASYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGE-MVLIGGIMEHI  782 (1073)
T ss_dssp             HHHHHCSSEEEEC-------CEEEECSHHHHHHHHHHCC--------EEEBCCTTCEEEEEEEEECSS-CEEEEEEEEES
T ss_pred             HHHHcCCCEEEEECCCCCCCCeEEECCHHHHHHHHHHHHhhCCCCcEEEEEccCCCcEEEEEEEEECC-eEEEEeeEEEE
Confidence            99999999999999999999999999999999999987665566799999999444499999999864 68889999999


Q ss_pred             ecccccccccccccCCCCCCHHHHHHHHHHHHHHHHHcCCCcceeEEEEEecCCCEEEEEEccCCCCChhhhhcccCCCH
Q 001014          881 EQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTSGDVYLLEANPRASRTVPFVSKAIGHPL  960 (1190)
Q Consensus       881 ~~~g~~~gd~~~~~p~~~l~~~~~~~i~~~a~~i~~~Lg~~G~~~ief~~d~~g~~~viEiNpR~~~s~~~~~~~~G~~l  960 (1190)
                      ++.|+|+|++.+.+|++.++++..+++++++++++++||++|++++||++ ++|++||||||||++++++++++++|+|+
T Consensus       783 ~~~g~~~gd~~~~~P~~~l~~~~~~~i~~~a~~i~~aLg~~G~~~vdf~v-~~~~~~viEvNpR~~~~~~~~~~~tGi~l  861 (1073)
T 1a9x_A          783 EQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAV-KNNEVYLIEVNPRAARTVPFVSKATGVPL  861 (1073)
T ss_dssp             SCTTSCGGGCCEEESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEE-CSSCEEEEEEECSCCTTHHHHHHHHSCCH
T ss_pred             eccCCccCCceEEecCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEE-ECCeEEEEEEECCCccHHHHHHHHHCcCH
Confidence            99999999999999998999999999999999999999999999999999 68899999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCccccCCeeEEeeccCCCcccCCCceeeCCcccccceeeeeeCCHHHHHHHHHHHcCCCCCC
Q 001014          961 AKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRSTGEVMGIDMSFPIAFAKAQIAAGQKLPL 1040 (1190)
Q Consensus       961 ~~~~~~~~lG~~l~~~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~lg~~~rs~G~v~~~g~~~~eA~~ka~~~~~~~~p~ 1040 (1190)
                      +++++++++|.+++++++.+...+++++||+++|||.+++++|+.+||+|+|||+|||+|+|+++|+.||+.++++.+|.
T Consensus       862 ~~~~~~~~~G~~l~~~~~~~~~~~~~~~vk~~~~~f~~~~~~d~~lg~~~~stGev~g~~~~~~~a~~ka~~~~~~~~p~  941 (1073)
T 1a9x_A          862 AKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKK  941 (1073)
T ss_dssp             HHHHHHHHTTCCHHHHTCCSCCCCSSEEEEEEECGGGGCTTSCCCCCSSCCCCEEEEEEESSHHHHHHHHHHHTTCCCCS
T ss_pred             HHHHHHHHcCCCchhcccCcCcCCCeEEEEeccCCcccCCCCcCCCCCcccccCceEEecCCHHHHHHhhHHhccCCCCC
Confidence            99999999999998776655555589999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceeeecCCCChhHHHHHHHHHHHCCCeeeeccccHHHHHHcCCceEEEecccCCCCcHHhHHHcCcEEEEEEcCCCCC
Q 001014         1041 SGTVFLSLNDLTKPHLERIAKAFLDIGFKIVSTSGTAHFLELKGIAVERVLKMHEGRPHAGDMVANGQIQMMVITSSGDS 1120 (1190)
Q Consensus      1041 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~~i~a~~gt~~~l~~~g~~~~~v~~~~e~~~~~~~~i~~~~i~lvint~~~~~ 1120 (1190)
                      .|++|+++.+.+|+.+.+++++|.++||+|+||.||+++|+++||+++.|.|++||+|+++|+|++|+|||||||++++.
T Consensus       942 ~g~vlisv~d~~K~~~~~~a~~l~~~G~~i~aT~gTa~~l~~~gi~~~~v~~~~~g~p~i~d~~~~~~~~~~~~~~~~~~ 1021 (1073)
T 1a9x_A          942 HGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRR 1021 (1073)
T ss_dssp             SSEEEEECCGGGGTTHHHHHHHHHHTTCEEEECHHHHHHHHTTTCCCEECBCTTTCSSBHHHHHHHTCCSEEEECCCSHH
T ss_pred             cceEEEEecCcCHHHHHHHHHHHHHCCCEEEEcCchHHHHHhCCceEEEEeecCCCCccHHHHHHcCCeEEEEECCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998855


Q ss_pred             CCCcccHHHHHHHHHCCCcEEccHHHHHHHHHHHHhccCCCcccccchhhhh
Q 001014         1121 LDQIDGLKLRRRGLAYKVPVITTVSGALANAEAIRSLKSNTVTMTALQDFFD 1172 (1190)
Q Consensus      1121 ~~~~d~~~iRr~A~~~~ip~~T~~~~a~a~~~al~~~~~~~~~~~~l~~~~~ 1172 (1190)
                      + ..|||.|||.|++++|||+||+++|+|++++|+..+.  +++.++|+||.
T Consensus      1022 ~-~~~~~~~r~~a~~~~~~~~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 1070 (1073)
T 1a9x_A         1022 A-IEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADAT--EKVISVQEMHA 1070 (1073)
T ss_dssp             H-HHHTHHHHHHHHHTTCEEESSHHHHHHHHHHHTCCTT--TCCCCHHHHHH
T ss_pred             c-ccchHHHHHHHHHhCCCEEccHHHHHHHHHHHHhhcc--CCeeEHHHHHh
Confidence            5 7899999999999999999999999999999976432  78999999986
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A* Back     alignment and structure
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A* Back     alignment and structure
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* Back     alignment and structure
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A* Back     alignment and structure
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A Back     alignment and structure
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A Back     alignment and structure
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* Back     alignment and structure
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 Back     alignment and structure
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus} Back     alignment and structure
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi} Back     alignment and structure
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans} Back     alignment and structure
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A Back     alignment and structure
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ... Back     alignment and structure
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis} Back     alignment and structure
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* Back     alignment and structure
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* Back     alignment and structure
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A* Back     alignment and structure
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A Back     alignment and structure
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A* Back     alignment and structure
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A* Back     alignment and structure
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} Back     alignment and structure
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A Back     alignment and structure
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A Back     alignment and structure
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A* Back     alignment and structure
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A Back     alignment and structure
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* Back     alignment and structure
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis} Back     alignment and structure
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A* Back     alignment and structure
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} Back     alignment and structure
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A* Back     alignment and structure
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus} Back     alignment and structure
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus} Back     alignment and structure
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* Back     alignment and structure
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 Back     alignment and structure
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans} Back     alignment and structure
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* Back     alignment and structure
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus} Back     alignment and structure
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} Back     alignment and structure
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ... Back     alignment and structure
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* Back     alignment and structure
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* Back     alignment and structure
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} Back     alignment and structure
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi} Back     alignment and structure
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis} Back     alignment and structure
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A Back     alignment and structure
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* Back     alignment and structure
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis} Back     alignment and structure
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 Back     alignment and structure
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A* Back     alignment and structure
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis} Back     alignment and structure
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 Back     alignment and structure
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus} Back     alignment and structure
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus} Back     alignment and structure
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A Back     alignment and structure
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A Back     alignment and structure
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A Back     alignment and structure
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A Back     alignment and structure
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A Back     alignment and structure
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis} Back     alignment and structure
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis} Back     alignment and structure
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens} Back     alignment and structure
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens} Back     alignment and structure
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A Back     alignment and structure
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A* Back     alignment and structure
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A* Back     alignment and structure
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A Back     alignment and structure
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A* Back     alignment and structure
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1 Back     alignment and structure
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B* Back     alignment and structure
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis} Back     alignment and structure
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A* Back     alignment and structure
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii} Back     alignment and structure
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans} Back     alignment and structure
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A* Back     alignment and structure
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A* Back     alignment and structure
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis} Back     alignment and structure
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A* Back     alignment and structure
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis} Back     alignment and structure
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {} Back     alignment and structure
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum} Back     alignment and structure
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1 Back     alignment and structure
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum} Back     alignment and structure
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B* Back     alignment and structure
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A* Back     alignment and structure
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A* Back     alignment and structure
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori} Back     alignment and structure
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A* Back     alignment and structure
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A Back     alignment and structure
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis} Back     alignment and structure
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii} Back     alignment and structure
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {} Back     alignment and structure
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans} Back     alignment and structure
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A* Back     alignment and structure
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori} Back     alignment and structure
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis} Back     alignment and structure
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A* Back     alignment and structure
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A* Back     alignment and structure
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A* Back     alignment and structure
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A* Back     alignment and structure
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens} Back     alignment and structure
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A* Back     alignment and structure
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A* Back     alignment and structure
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A* Back     alignment and structure
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A* Back     alignment and structure
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A* Back     alignment and structure
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A* Back     alignment and structure
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9 Back     alignment and structure
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9 Back     alignment and structure
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus} Back     alignment and structure
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A Back     alignment and structure
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2 Back     alignment and structure
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus} Back     alignment and structure
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A Back     alignment and structure
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A Back     alignment and structure
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A Back     alignment and structure
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X* Back     alignment and structure
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X* Back     alignment and structure
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida} Back     alignment and structure
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida} Back     alignment and structure
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V} Back     alignment and structure
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V} Back     alignment and structure
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X Back     alignment and structure
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii} Back     alignment and structure
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X Back     alignment and structure
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens} Back     alignment and structure
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii} Back     alignment and structure
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A* Back     alignment and structure
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A* Back     alignment and structure
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A* Back     alignment and structure
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A* Back     alignment and structure
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens} Back     alignment and structure
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B* Back     alignment and structure
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B* Back     alignment and structure
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B* Back     alignment and structure
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A* Back     alignment and structure
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B* Back     alignment and structure
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A* Back     alignment and structure
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus} Back     alignment and structure
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus} Back     alignment and structure
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4 Back     alignment and structure
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A* Back     alignment and structure
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A* Back     alignment and structure
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens} Back     alignment and structure
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A* Back     alignment and structure
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp} Back     alignment and structure
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A* Back     alignment and structure
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A* Back     alignment and structure
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A* Back     alignment and structure
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens} Back     alignment and structure
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* Back     alignment and structure
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} Back     alignment and structure
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Back     alignment and structure
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* Back     alignment and structure
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Back     alignment and structure
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} Back     alignment and structure
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* Back     alignment and structure
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Back     alignment and structure
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A* Back     alignment and structure
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Back     alignment and structure
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Back     alignment and structure
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Back     alignment and structure
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Back     alignment and structure
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Back     alignment and structure
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Back     alignment and structure
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Back     alignment and structure
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A* Back     alignment and structure
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 Back     alignment and structure
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* Back     alignment and structure
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Back     alignment and structure
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* Back     alignment and structure
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri} Back     alignment and structure
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Back     alignment and structure
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Back     alignment and structure
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A* Back     alignment and structure
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} Back     alignment and structure
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} Back     alignment and structure
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} Back     alignment and structure
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis} Back     alignment and structure
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri} Back     alignment and structure
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Back     alignment and structure
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Back     alignment and structure
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A Back     alignment and structure
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} Back     alignment and structure
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A Back     alignment and structure
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* Back     alignment and structure
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Back     alignment and structure
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* Back     alignment and structure
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Back     alignment and structure
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Back     alignment and structure
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Back     alignment and structure
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* Back     alignment and structure
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 Back     alignment and structure
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Back     alignment and structure
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Back     alignment and structure
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A Back     alignment and structure
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} Back     alignment and structure
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum} Back     alignment and structure
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 Back     alignment and structure
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Back     alignment and structure
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus} Back     alignment and structure
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Back     alignment and structure
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Back     alignment and structure
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* Back     alignment and structure
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A* Back     alignment and structure
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Back     alignment and structure
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Back     alignment and structure
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Back     alignment and structure
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Back     alignment and structure
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Back     alignment and structure
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Back     alignment and structure
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* Back     alignment and structure
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Back     alignment and structure
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Back     alignment and structure
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia} Back     alignment and structure
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Back     alignment and structure
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Back     alignment and structure
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Back     alignment and structure
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Back     alignment and structure
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 Back     alignment and structure
>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A* Back     alignment and structure
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Back     alignment and structure
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* Back     alignment and structure
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Back     alignment and structure
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Back     alignment and structure
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 Back     alignment and structure
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Back     alignment and structure
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Back     alignment and structure
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Back     alignment and structure
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} Back     alignment and structure
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Back     alignment and structure
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Back     alignment and structure
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Back     alignment and structure
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} Back     alignment and structure
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* Back     alignment and structure
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Back     alignment and structure
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Back     alignment and structure
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* Back     alignment and structure
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Back     alignment and structure
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} Back     alignment and structure
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Back     alignment and structure
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Back     alignment and structure
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Back     alignment and structure
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* Back     alignment and structure
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Back     alignment and structure
>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A* Back     alignment and structure
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 Back     alignment and structure
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} Back     alignment and structure
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1190
d1a9xa5275 d.142.1.2 (A:128-402) Carbamoyl phosphate syntheta 1e-102
d1a9xa5275 d.142.1.2 (A:128-402) Carbamoyl phosphate syntheta 8e-77
d1a9xa6259 d.142.1.2 (A:677-935) Carbamoyl phosphate syntheta 3e-87
d1a9xa6259 d.142.1.2 (A:677-935) Carbamoyl phosphate syntheta 1e-75
d1a9xa3127 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase 9e-53
d1a9xa3127 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase 8e-43
d2r7ka2238 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carbo 2e-45
d2r7ka2238 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carbo 6e-39
d1a9xa1153 a.92.1.1 (A:403-555) Carbamoyl phosphate synthetas 3e-45
d1a9xa4121 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetas 3e-44
d1a9xa4121 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetas 1e-42
d2r85a2235 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carbo 3e-41
d2r85a2235 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carbo 9e-32
d1ulza3214 d.142.1.2 (A:115-328) Biotin carboxylase (BC), dom 2e-38
d1ulza3214 d.142.1.2 (A:115-328) Biotin carboxylase (BC), dom 3e-31
d2j9ga3216 d.142.1.2 (A:115-330) Biotin carboxylase (BC), dom 4e-34
d2j9ga3216 d.142.1.2 (A:115-330) Biotin carboxylase (BC), dom 5e-31
d1a9xa2138 c.24.1.1 (A:936-1073) Carbamoyl phosphate syntheta 2e-31
d1w96a3267 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M 2e-23
d1w96a3267 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M 1e-22
d1b93a_148 c.24.1.2 (A:) Methylglyoxal synthase, MgsA {Escher 6e-22
d1vmda_156 c.24.1.2 (A:) Methylglyoxal synthase, MgsA {Thermo 9e-21
d1kjqa3206 d.142.1.2 (A:113-318) Glycinamide ribonucleotide t 4e-20
d1kjqa3206 d.142.1.2 (A:113-318) Glycinamide ribonucleotide t 1e-19
d1wo8a1126 c.24.1.2 (A:1-126) Methylglyoxal synthase, MgsA {T 3e-18
d1uc8a2192 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme Ly 1e-14
d1uc8a2192 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme Ly 2e-11
d3etja3198 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribo 1e-13
d3etja3198 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribo 3e-12
d1iowa2210 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain 1e-13
d1iowa2210 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain 3e-10
d1e4ea2211 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase V 9e-12
d1e4ea2211 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase V 4e-09
d1vkza3220 d.142.1.2 (A:94-313) Glycinamide ribonucleotide sy 3e-10
d1vkza3220 d.142.1.2 (A:94-313) Glycinamide ribonucleotide sy 1e-07
d1gsoa3224 d.142.1.2 (A:104-327) Glycinamide ribonucleotide s 4e-10
d1gsoa3224 d.142.1.2 (A:104-327) Glycinamide ribonucleotide s 6e-07
d1ehia2228 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase V 8e-09
d1i7na2206 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus nor 2e-07
d1zcza1157 c.24.1.3 (A:1-157) IMP cyclohydrolase domain of bi 9e-06
d1g8ma1197 c.24.1.3 (A:4-200) IMP cyclohydrolase domain of bi 1e-04
d1eucb2246 d.142.1.4 (B:0-245) Succinyl-CoA synthetase, beta- 0.002
d2nu7b2238 d.142.1.4 (B:1-238) Succinyl-CoA synthetase, beta- 0.003
>d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} Length = 275 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: ATP-grasp
superfamily: Glutathione synthetase ATP-binding domain-like
family: BC ATP-binding domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains
species: Escherichia coli [TaxId: 562]

 Score =  322 bits (827), Expect = e-102
 Identities = 194/276 (70%), Positives = 235/276 (85%), Gaps = 2/276 (0%)

Query: 213 DRDLFKQAMKTIGVKTPPSGIGNTLDECISIANEIGEFPLIIRPAFTLGGTGGGIAYNKE 272
           DR  F  AMK IG++T  SGI +T++E +++A ++G FP IIRP+FT+GG+GGGIAYN+E
Sbjct: 1   DRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVG-FPCIIRPSFTMGGSGGGIAYNRE 59

Query: 273 EFEAICKAGLAASLTSQVLVEKSLLGWKEYELEVMRDLADNVVIICSIENVDPMGVHTGD 332
           EFE IC  GL  S T ++L+++SL+GWKEYE+EV+RD  DN +I+CSIEN D MG+HTGD
Sbjct: 60  EFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGD 119

Query: 333 SITVAPAQTLTDKEYQRLRDYSIAIIREIGVECGGSNVQFAVNPVDGEVMVIEMNPRVSR 392
           SITVAPAQTLTDKEYQ +R+ S+A++REIGVE GGSNVQFAVNP +G ++VIEMNPRVSR
Sbjct: 120 SITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSR 179

Query: 393 SSALASKATGFPIAKMAAKLSVGYSLDQIPNDIT-KKTPASFEPSIDYVVTKIPRFAFEK 451
           SSALASKATGFPIAK+AAKL+VGY+LD++ NDIT  +TPASFEPSIDYVVTKIPRF FEK
Sbjct: 180 SSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEK 239

Query: 452 FPGSEPLLTTQMKSVGEAMALGRTFQESFQKALRSL 487
           F G+   LTTQMKSVGE MA+GRT QES QKALR L
Sbjct: 240 FAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGL 275
>d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} Length = 275 Back     information, alignment and structure
>d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} Length = 259 Back     information, alignment and structure
>d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} Length = 259 Back     information, alignment and structure
>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Length = 127 Back     information, alignment and structure
>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Length = 127 Back     information, alignment and structure
>d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]} Length = 238 Back     information, alignment and structure
>d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]} Length = 238 Back     information, alignment and structure
>d1a9xa1 a.92.1.1 (A:403-555) Carbamoyl phosphate synthetase, large subunit connection domain {Escherichia coli [TaxId: 562]} Length = 153 Back     information, alignment and structure
>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Length = 121 Back     information, alignment and structure
>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Length = 121 Back     information, alignment and structure
>d2r85a2 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]} Length = 235 Back     information, alignment and structure
>d2r85a2 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]} Length = 235 Back     information, alignment and structure
>d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]} Length = 214 Back     information, alignment and structure
>d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]} Length = 214 Back     information, alignment and structure
>d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]} Length = 216 Back     information, alignment and structure
>d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]} Length = 216 Back     information, alignment and structure
>d1a9xa2 c.24.1.1 (A:936-1073) Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 138 Back     information, alignment and structure
>d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 267 Back     information, alignment and structure
>d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 267 Back     information, alignment and structure
>d1b93a_ c.24.1.2 (A:) Methylglyoxal synthase, MgsA {Escherichia coli [TaxId: 562]} Length = 148 Back     information, alignment and structure
>d1vmda_ c.24.1.2 (A:) Methylglyoxal synthase, MgsA {Thermotoga maritima [TaxId: 2336]} Length = 156 Back     information, alignment and structure
>d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]} Length = 206 Back     information, alignment and structure
>d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]} Length = 206 Back     information, alignment and structure
>d1wo8a1 c.24.1.2 (A:1-126) Methylglyoxal synthase, MgsA {Thermus thermophilus [TaxId: 274]} Length = 126 Back     information, alignment and structure
>d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]} Length = 192 Back     information, alignment and structure
>d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]} Length = 192 Back     information, alignment and structure
>d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]} Length = 198 Back     information, alignment and structure
>d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]} Length = 198 Back     information, alignment and structure
>d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]} Length = 210 Back     information, alignment and structure
>d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]} Length = 210 Back     information, alignment and structure
>d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]} Length = 211 Back     information, alignment and structure
>d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]} Length = 211 Back     information, alignment and structure
>d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]} Length = 220 Back     information, alignment and structure
>d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]} Length = 220 Back     information, alignment and structure
>d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]} Length = 224 Back     information, alignment and structure
>d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]} Length = 224 Back     information, alignment and structure
>d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]} Length = 228 Back     information, alignment and structure
>d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 206 Back     information, alignment and structure
>d1zcza1 c.24.1.3 (A:1-157) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Thermotoga maritima [TaxId: 2336]} Length = 157 Back     information, alignment and structure
>d1g8ma1 c.24.1.3 (A:4-200) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]} Length = 197 Back     information, alignment and structure
>d1eucb2 d.142.1.4 (B:0-245) Succinyl-CoA synthetase, beta-chain, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 246 Back     information, alignment and structure
>d2nu7b2 d.142.1.4 (B:1-238) Succinyl-CoA synthetase, beta-chain, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 238 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1190
d1a9xa6259 Carbamoyl phosphate synthetase (CPS), large subuni 100.0
d1a9xa6259 Carbamoyl phosphate synthetase (CPS), large subuni 100.0
d1a9xa5275 Carbamoyl phosphate synthetase (CPS), large subuni 100.0
d1a9xa1153 Carbamoyl phosphate synthetase, large subunit conn 100.0
d1a9xa5275 Carbamoyl phosphate synthetase (CPS), large subuni 100.0
d2j9ga3216 Biotin carboxylase (BC), domain 2 {Escherichia col 99.97
d2j9ga3216 Biotin carboxylase (BC), domain 2 {Escherichia col 99.97
d1ulza3214 Biotin carboxylase (BC), domain 2 {Aquifex aeolicu 99.97
d1a9xa2138 Carbamoyl phosphate synthetase, large subunit allo 99.97
d1w96a3267 Acetyl-CoA carboxylase, BC-M subdomain {Baker's ye 99.96
d1ulza3214 Biotin carboxylase (BC), domain 2 {Aquifex aeolicu 99.96
d1a9xa4121 Carbamoyl phosphate synthetase (CPS), large subuni 99.96
d1w96a3267 Acetyl-CoA carboxylase, BC-M subdomain {Baker's ye 99.96
d1a9xa3127 Carbamoyl phosphate synthetase (CPS), large subuni 99.95
d1a9xa3127 Carbamoyl phosphate synthetase (CPS), large subuni 99.94
d1kjqa3206 Glycinamide ribonucleotide transformylase PurT, do 99.94
d1kjqa3206 Glycinamide ribonucleotide transformylase PurT, do 99.94
d3etja3198 N5-carboxyaminoimidazole ribonucleotide synthetase 99.94
d3etja3198 N5-carboxyaminoimidazole ribonucleotide synthetase 99.93
d1a9xa4121 Carbamoyl phosphate synthetase (CPS), large subuni 99.92
d1gsoa3224 Glycinamide ribonucleotide synthetase (GAR-syn), d 99.91
d1vkza3220 Glycinamide ribonucleotide synthetase (GAR-syn), d 99.91
d1vkza3220 Glycinamide ribonucleotide synthetase (GAR-syn), d 99.91
d2r7ka2238 5-formaminoimidazole-4-carboxamide ribonucleotide 99.91
d2r7ka2238 5-formaminoimidazole-4-carboxamide ribonucleotide 99.91
d1gsoa3224 Glycinamide ribonucleotide synthetase (GAR-syn), d 99.91
d1iowa2210 D-ala-D-ala ligase, C-domain {Escherichia coli, ge 99.9
d1vmda_156 Methylglyoxal synthase, MgsA {Thermotoga maritima 99.9
d1ehia2228 D-alanine:D-lactate ligase VanA, C-domain {Leucono 99.89
d1iowa2210 D-ala-D-ala ligase, C-domain {Escherichia coli, ge 99.88
d1e4ea2211 D-alanine:D-lactate ligase VanA, C-domain {Enteroc 99.88
d1e4ea2211 D-alanine:D-lactate ligase VanA, C-domain {Enteroc 99.88
d1ehia2228 D-alanine:D-lactate ligase VanA, C-domain {Leucono 99.88
d1b93a_148 Methylglyoxal synthase, MgsA {Escherichia coli [Ta 99.88
d2r85a2235 5-formaminoimidazole-4-carboxamide ribonucleotide 99.86
d2r85a2235 5-formaminoimidazole-4-carboxamide ribonucleotide 99.86
d1uc8a2192 Lysine biosynthesis enzyme LysX ATP-binding domain 99.86
d1uc8a2192 Lysine biosynthesis enzyme LysX ATP-binding domain 99.84
d1wo8a1126 Methylglyoxal synthase, MgsA {Thermus thermophilus 99.82
d1i7na2206 Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116 99.65
d1i7na2206 Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116 99.62
d1ulza2114 Biotin carboxylase (BC), N-terminal domain {Aquife 98.98
d1gsaa2192 Prokaryotic glutathione synthetase, C-domain {Esch 98.96
d1gsaa2192 Prokaryotic glutathione synthetase, C-domain {Esch 98.95
d2j9ga2114 Biotin carboxylase (BC), N-terminal domain {Escher 98.92
d1kjqa2111 Glycinamide ribonucleotide transformylase PurT, N- 98.86
d1kjqa2111 Glycinamide ribonucleotide transformylase PurT, N- 98.79
d1ulza2114 Biotin carboxylase (BC), N-terminal domain {Aquife 98.78
d2j9ga2114 Biotin carboxylase (BC), N-terminal domain {Escher 98.71
d1zcza1157 IMP cyclohydrolase domain of bifunctional purine b 98.63
d1iowa196 D-Ala-D-Ala ligase, N-domain {Escherichia coli, ge 98.6
d1w96a2170 Acetyl-CoA carboxylase, BC-N subdomain {Baker's ye 98.46
d2nu7b2238 Succinyl-CoA synthetase, beta-chain, N-terminal do 98.35
d1w96a2170 Acetyl-CoA carboxylase, BC-N subdomain {Baker's ye 98.26
d1gsoa2105 Glycinamide ribonucleotide synthetase (GAR-syn), N 98.23
d2nu7b2238 Succinyl-CoA synthetase, beta-chain, N-terminal do 98.21
d1ehia1132 D-alanine:D-lactate ligase VanA, N-domain {Leucono 98.09
d2pbza2213 5-formaminoimidazole-4-carboxamide ribonucleotide 98.08
d1eucb2246 Succinyl-CoA synthetase, beta-chain, N-terminal do 98.05
d2pbza2213 5-formaminoimidazole-4-carboxamide ribonucleotide 97.99
d1eucb2246 Succinyl-CoA synthetase, beta-chain, N-terminal do 97.99
d1e4ea1130 D-alanine:D-lactate ligase VanA, N-domain {Enteroc 97.87
d1gsoa2105 Glycinamide ribonucleotide synthetase (GAR-syn), N 97.85
d1g8ma1197 IMP cyclohydrolase domain of bifunctional purine b 97.68
d2j9ga1116 Biotin carboxylase (BC), C-domain {Escherichia col 97.4
d3etja278 N5-carboxyaminoimidazole ribonucleotide synthetase 97.29
d1w96a1116 Acetyl-CoA carboxylase, BC-C subdomain {Baker's ye 97.09
d1ulza1123 Biotin carboxylase (BC), C-domain {Aquifex aeolicu 97.08
d3etja278 N5-carboxyaminoimidazole ribonucleotide synthetase 97.05
d1vkza290 Glycinamide ribonucleotide synthetase (GAR-syn), N 97.04
d1vkza290 Glycinamide ribonucleotide synthetase (GAR-syn), N 96.72
d1iowa196 D-Ala-D-Ala ligase, N-domain {Escherichia coli, ge 96.32
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 95.93
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 95.78
d2jfga193 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 95.68
d2jfga193 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 95.19
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 95.11
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 95.0
d1hdoa_205 Biliverdin IX beta reductase {Human (Homo sapiens) 94.19
d1kjqa174 Glycinamide ribonucleotide transformylase PurT, C- 93.83
d1hdoa_205 Biliverdin IX beta reductase {Human (Homo sapiens) 93.63
d1kjqa174 Glycinamide ribonucleotide transformylase PurT, C- 92.01
d1id1a_153 Rck domain from putative potassium channel Kch {Es 91.75
d1vl0a_281 DTDP-4-dehydrorhamnose reductase RfbD {Clostridium 91.53
d1h6va2122 Mammalian thioredoxin reductase {Rat (Rattus norve 91.17
d1uc8a188 Lysine biosynthesis enzyme LysX, N-terminal domain 90.9
d1vj0a2182 Hypothetical protein TM0436 {Thermotoga maritima [ 90.72
d1ps9a3179 2,4-dienoyl-CoA reductase, middle domain {Escheric 90.51
d2d59a1139 Hypothetical protein PH1109 {Pyrococcus horikoshii 90.07
d1pl8a2171 Ketose reductase (sorbitol dehydrogenase) {Human ( 89.97
d1ehia1132 D-alanine:D-lactate ligase VanA, N-domain {Leucono 89.95
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 89.81
d1xhca2122 NADH oxidase /nitrite reductase {Pyrococcus furios 89.79
d2csua1129 Acetate-CoA ligase alpha chain, AcdA, N-terminal d 89.43
d1ps9a3179 2,4-dienoyl-CoA reductase, middle domain {Escheric 89.09
d1jqba2174 Bacterial secondary alcohol dehydrogenase {Clostri 89.01
d1y81a1116 Hypothetical protein PF0725 {Pyrococcus furiosus [ 88.96
d1y81a1116 Hypothetical protein PF0725 {Pyrococcus furiosus [ 88.79
d1e3ia2174 Alcohol dehydrogenase {Mouse (Mus musculus), class 88.63
d1e3ja2170 Ketose reductase (sorbitol dehydrogenase) {Silverl 88.55
d1udca_338 Uridine diphosphogalactose-4-epimerase (UDP-galact 88.41
d2c5aa1363 GDP-mannose-3', 5'-epimerase {Thale cress (Arabido 88.37
d1d1ta2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 88.37
d1e3ja2170 Ketose reductase (sorbitol dehydrogenase) {Silverl 87.73
d1vj0a2182 Hypothetical protein TM0436 {Thermotoga maritima [ 87.57
d1pl8a2171 Ketose reductase (sorbitol dehydrogenase) {Human ( 87.53
d2d59a1139 Hypothetical protein PH1109 {Pyrococcus horikoshii 87.24
d1gesa2116 Glutathione reductase {Escherichia coli [TaxId: 56 87.23
d1f0ya2192 Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum 87.03
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 86.83
d1e5qa1182 Saccharopine reductase {Rice blast fungus (Magnapo 86.69
d3etja179 N5-carboxyaminoimidazole ribonucleotide synthetase 86.64
d1c0pa1268 D-aminoacid oxidase, N-terminal domain {Rhodotorul 86.63
d1e4ea1130 D-alanine:D-lactate ligase VanA, N-domain {Enteroc 86.32
d1seza1373 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 86.28
d2r7ka1123 5-formaminoimidazole-4-carboxamide ribonucleotide 86.09
d1e5qa1182 Saccharopine reductase {Rice blast fungus (Magnapo 86.08
d1seza1373 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 86.05
d2voua1265 Dihydroxypyridine hydroxylase DhpH {Arthrobacter n 86.04
d1lvla2115 Dihydrolipoamide dehydrogenase {Pseudomonas putida 85.92
d2r85a199 5-formaminoimidazole-4-carboxamide ribonucleotide 85.82
d1uufa2168 Hypothetical protein YahK {Escherichia coli [TaxId 85.73
d1gtea4196 Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su 85.64
d2pv7a2152 Prephenate dehydrogenase TyrA {Haemophilus influen 85.59
d1e6ua_315 GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( 85.49
d1v59a2122 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 85.19
d1p0fa2174 Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 85.07
d1llua2166 Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax 85.03
d1djqa3233 Trimethylamine dehydrogenase, middle domain {Methy 84.78
d1vl0a_281 DTDP-4-dehydrorhamnose reductase RfbD {Clostridium 84.71
d1rkxa_356 CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc 84.5
d1rkxa_356 CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc 84.49
d1gesa2116 Glutathione reductase {Escherichia coli [TaxId: 56 84.4
d1jqba2174 Bacterial secondary alcohol dehydrogenase {Clostri 84.39
d1ebda2117 Dihydrolipoamide dehydrogenase {Bacillus stearothe 84.31
d1e3ia2174 Alcohol dehydrogenase {Mouse (Mus musculus), class 84.24
d1v59a2122 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 84.22
d1nhpa2123 NADH peroxidase {Enterococcus faecalis [TaxId: 135 84.12
d1gtea4196 Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su 83.97
d2iida1370 L-aminoacid oxidase {Malayan pit viper (Calloselas 83.96
d1ks9a2167 Ketopantoate reductase PanE {Escherichia coli [Tax 83.86
d1uufa2168 Hypothetical protein YahK {Escherichia coli [TaxId 83.76
d2pv7a2152 Prephenate dehydrogenase TyrA {Haemophilus influen 83.67
d1llua2166 Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax 83.62
d1q1ra2133 Putidaredoxin reductase {Pseudomonas putida [TaxId 83.61
d2iida1370 L-aminoacid oxidase {Malayan pit viper (Calloselas 83.31
d1piwa2168 Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas 83.24
d1t2aa_347 GDP-mannose 4,6-dehydratase {Human (Homo sapiens) 83.22
d1djqa3233 Trimethylamine dehydrogenase, middle domain {Methy 83.04
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 82.95
d1onfa2117 Glutathione reductase {Plasmodium falciparum [TaxI 82.93
d1yb5a2174 Quinone oxidoreductase {Human (Homo sapiens) [TaxI 82.91
d3lada2119 Dihydrolipoamide dehydrogenase {Azotobacter vinela 82.82
d1d7ya2121 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 82.79
d2bi7a1314 UDP-galactopyranose mutase, N-terminal domain {Kle 82.69
d1onfa2117 Glutathione reductase {Plasmodium falciparum [TaxI 82.59
d3lada2119 Dihydrolipoamide dehydrogenase {Azotobacter vinela 82.55
d1e6ua_315 GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( 82.34
d1n7ha_339 GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop 82.26
d2bi7a1314 UDP-galactopyranose mutase, N-terminal domain {Kle 82.25
d1lvla2115 Dihydrolipoamide dehydrogenase {Pseudomonas putida 81.91
d1h6va2122 Mammalian thioredoxin reductase {Rat (Rattus norve 81.74
d2voua1265 Dihydroxypyridine hydroxylase DhpH {Arthrobacter n 81.64
d2c5aa1363 GDP-mannose-3', 5'-epimerase {Thale cress (Arabido 81.59
d1d7ya2121 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 81.5
d1ek6a_346 Uridine diphosphogalactose-4-epimerase (UDP-galact 81.37
d2a9pa1117 DNA-binding response regulator MicA, N-terminal do 81.31
d1q1ra2133 Putidaredoxin reductase {Pseudomonas putida [TaxId 81.27
d1f8fa2174 Benzyl alcohol dehydrogenase {Acinetobacter calcoa 81.27
d1nhpa2123 NADH peroxidase {Enterococcus faecalis [TaxId: 135 81.2
d2q46a1252 Hypothetical protein At5g02240 (T7H20_290) {Thale 81.13
d1db3a_357 GDP-mannose 4,6-dehydratase {Escherichia coli [Tax 81.08
d1id1a_153 Rck domain from putative potassium channel Kch {Es 80.94
d2bkaa1232 TAT-interacting protein TIP30 {Human (Homo sapiens 80.89
d1ebda2117 Dihydrolipoamide dehydrogenase {Bacillus stearothe 80.6
d1i24a_393 Sulfolipid biosynthesis protein SQD1 {Thale cress 80.51
d1kewa_361 dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus 80.44
d2jhfa2176 Alcohol dehydrogenase {Horse (Equus caballus) [Tax 80.26
d1c0pa1268 D-aminoacid oxidase, N-terminal domain {Rhodotorul 80.25
>d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: ATP-grasp
superfamily: Glutathione synthetase ATP-binding domain-like
family: BC ATP-binding domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-52  Score=455.40  Aligned_cols=259  Identities=59%  Similarity=0.905  Sum_probs=235.5

Q ss_pred             HHHHHHHHcCCCCCCceeecCHHHHHHHHHHhCCcEEEecCcCCCCcceEEeCCHHHHHHHHHHhHhhCCCCcEEEEEec
Q 001014          774 RFNAIIKELSIEQPKGGIAKSEADALAIAKEIGYPVVVRPSYVLGGRAMEIVYTDETLVTYLENAVEVDPERPVLIDKYL  853 (1190)
Q Consensus       774 ~~~~~l~~~gIp~p~~~~~~s~~e~~~~~~~igyPvvvKP~~~~gg~Gv~iv~~~~el~~~~~~~~~~~~~~~vliEefI  853 (1190)
                      +|+++|+++|||+|++..++|.+++.++++++||||||||++++||+||.+++|.+||+++++++...+++.++++|+|+
T Consensus         1 rF~~~l~~lgi~~p~~~~v~s~~ea~~~a~~iGfPvivKps~~~gG~G~~iv~~~~el~~~~~~a~~~~~~~~vlie~~i   80 (259)
T d1a9xa6           1 RFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRASYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFL   80 (259)
T ss_dssp             HHHHHHHHHTCCCCCEEECCSHHHHHHHHHHHCSSEEEEC-------CEEEECSHHHHHHHHHHCC--------EEEBCC
T ss_pred             ChHHHHHHCCCCCCCceEECCHHHHHHHHHHhCCCEEEEECCCCCCCccEeecCHHHHHHHhhhhhcccccchhhhhhhc
Confidence            58999999999999999999999999999999999999999999999999999999999999998888888899999999


Q ss_pred             CCcceEEEeEEecCCCcEEEEeeeeeeecccccccccccccCCCCCCHHHHHHHHHHHHHHHHHcCCCcceeEEEEEecC
Q 001014          854 SDAIEIDVDALADSCGNVVIGGIMEHIEQAGVHSGDSACMIPTKTISSSCLDTISSWTIKLAKRLNVCGLMNCQYAITTS  933 (1190)
Q Consensus       854 ~~g~E~~v~v~~d~~G~v~~~~i~e~~~~~g~~~gd~~~~~p~~~l~~~~~~~i~~~a~~i~~~Lg~~G~~~ief~~d~~  933 (1190)
                      ++++|++|++++|++ .+.+++++||+++.|+|+||+.+++|++.++++.++++++++.++++.||+.|++++||++ ++
T Consensus        81 ~~~~Eiev~~i~Dg~-~~~i~~i~e~i~~~gvhsgds~~~~p~~~l~~~~~~~l~~~a~kia~~l~~~G~~~vef~v-~~  158 (259)
T d1a9xa6          81 DDAVEVDVDAICDGE-MVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAV-KN  158 (259)
T ss_dssp             TTCEEEEEEEEECSS-CEEEEEEEEESSCTTSCGGGCCEEESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEE-CS
T ss_pred             CCCeEEEEEEEEeCC-cEEEEeeeeccccCcceeEeccccccCccCCHHHHHHHHHHHHHHHHHhhhccceeEEEEE-EC
Confidence            888999999999975 7888899999999999999999999999999999999999999999999999999999999 78


Q ss_pred             CCEEEEEEccCCCCChhhhhcccCCCHHHHHHHHHcCCCCCCCCCCccccCCeeEEeeccCCCcccCCCceeeCCccccc
Q 001014          934 GDVYLLEANPRASRTVPFVSKAIGHPLAKYAALVMSGKSLNDLGFTKEVIPKHVSVKEAVLPFEKFQGCDVLLGPEMRST 1013 (1190)
Q Consensus       934 g~~~viEiNpR~~~s~~~~~~~~G~~l~~~~~~~~lG~~l~~~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~lg~~~rs~ 1013 (1190)
                      +++||||+|||+++++++++++||+|++++++++++|.++.++.+.....+++++||+|+|||++|+++|+.||++||||
T Consensus       159 ~~~y~iEvNpR~~~~~~~~~k~tg~~lv~~~~~i~~G~~l~~~~~~~~~~~~~~~vk~~v~~f~k~~~~d~~lg~emkst  238 (259)
T d1a9xa6         159 NEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRST  238 (259)
T ss_dssp             SCEEEEEEECSCCTTHHHHHHHHSCCHHHHHHHHHTTCCHHHHTCCSCCCCSSEEEEEEECGGGGCTTSCCCCCSSCCCC
T ss_pred             CEEEEEEcccccCCceeeeeHhhCCCHHHHHHHHhcCCCccccccccccCCCcEEEEEEcCCccccCCCCCCCCCCeeee
Confidence            89999999999999999999999999999999999999999877766777899999999999999999999999999999


Q ss_pred             ceeeeeeCCHHHHHHHHHHHc
Q 001014         1014 GEVMGIDMSFPIAFAKAQIAA 1034 (1190)
Q Consensus      1014 G~v~~~g~~~~eA~~ka~~~~ 1034 (1190)
                      |||||+|+|++||++||++++
T Consensus       239 Gevm~~g~~~~eA~~Ka~~~a  259 (259)
T d1a9xa6         239 GEVMGVGRTFAEAFAKAQLGS  259 (259)
T ss_dssp             EEEEEEESSHHHHHHHHHHHT
T ss_pred             eeEEEEcCCHHHHHHHHHhcC
Confidence            999999999999999999874
>d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a9xa1 a.92.1.1 (A:403-555) Carbamoyl phosphate synthetase, large subunit connection domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1a9xa2 c.24.1.1 (A:936-1073) Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]} Back     information, alignment and structure
>d1vmda_ c.24.1.2 (A:) Methylglyoxal synthase, MgsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]} Back     information, alignment and structure
>d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]} Back     information, alignment and structure
>d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]} Back     information, alignment and structure
>d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]} Back     information, alignment and structure
>d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]} Back     information, alignment and structure
>d1b93a_ c.24.1.2 (A:) Methylglyoxal synthase, MgsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2r85a2 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2r85a2 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1wo8a1 c.24.1.2 (A:1-126) Methylglyoxal synthase, MgsA {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ulza2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1gsaa2 d.142.1.1 (A:123-314) Prokaryotic glutathione synthetase, C-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gsaa2 d.142.1.1 (A:123-314) Prokaryotic glutathione synthetase, C-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2j9ga2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ulza2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2j9ga2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zcza1 c.24.1.3 (A:1-157) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]} Back     information, alignment and structure
>d1w96a2 c.30.1.1 (A:14-183) Acetyl-CoA carboxylase, BC-N subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2nu7b2 d.142.1.4 (B:1-238) Succinyl-CoA synthetase, beta-chain, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w96a2 c.30.1.1 (A:14-183) Acetyl-CoA carboxylase, BC-N subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2nu7b2 d.142.1.4 (B:1-238) Succinyl-CoA synthetase, beta-chain, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ehia1 c.30.1.2 (A:3-134) D-alanine:D-lactate ligase VanA, N-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]} Back     information, alignment and structure
>d2pbza2 d.142.1.9 (A:100-312) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]} Back     information, alignment and structure
>d1eucb2 d.142.1.4 (B:0-245) Succinyl-CoA synthetase, beta-chain, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2pbza2 d.142.1.9 (A:100-312) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]} Back     information, alignment and structure
>d1eucb2 d.142.1.4 (B:0-245) Succinyl-CoA synthetase, beta-chain, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1e4ea1 c.30.1.2 (A:2-131) D-alanine:D-lactate ligase VanA, N-domain {Enterococcus faecium [TaxId: 1352]} Back     information, alignment and structure
>d1g8ma1 c.24.1.3 (A:4-200) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d2j9ga1 b.84.2.1 (A:331-446) Biotin carboxylase (BC), C-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w96a1 b.84.2.1 (A:451-566) Acetyl-CoA carboxylase, BC-C subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ulza1 b.84.2.1 (A:329-451) Biotin carboxylase (BC), C-domain {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kjqa1 b.84.2.1 (A:319-392) Glycinamide ribonucleotide transformylase PurT, C-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kjqa1 b.84.2.1 (A:319-392) Glycinamide ribonucleotide transformylase PurT, C-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure
>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1uc8a1 c.30.1.6 (A:1-88) Lysine biosynthesis enzyme LysX, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ehia1 c.30.1.2 (A:3-134) D-alanine:D-lactate ligase VanA, N-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Back     information, alignment and structure
>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Back     information, alignment and structure
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Back     information, alignment and structure
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Back     information, alignment and structure
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d3etja1 b.84.2.1 (A:277-355) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), C-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Back     information, alignment and structure
>d1e4ea1 c.30.1.2 (A:2-131) D-alanine:D-lactate ligase VanA, N-domain {Enterococcus faecium [TaxId: 1352]} Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d2r7ka1 c.30.1.8 (A:1-123) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Back     information, alignment and structure
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Back     information, alignment and structure
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Back     information, alignment and structure
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Back     information, alignment and structure
>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Back     information, alignment and structure
>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Back     information, alignment and structure
>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Back     information, alignment and structure
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Back     information, alignment and structure
>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Back     information, alignment and structure
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Back     information, alignment and structure