Citrus Sinensis ID: 001017
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1189 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SX33 | 1200 | Putative phospholipid-tra | yes | no | 0.981 | 0.972 | 0.719 | 0.0 | |
| Q9LI83 | 1202 | Phospholipid-transporting | no | no | 0.991 | 0.980 | 0.714 | 0.0 | |
| Q9SAF5 | 1203 | Putative phospholipid-tra | no | no | 0.991 | 0.980 | 0.706 | 0.0 | |
| P57792 | 1184 | Putative phospholipid-tra | no | no | 0.981 | 0.985 | 0.701 | 0.0 | |
| Q9LK90 | 1189 | Putative phospholipid-tra | no | no | 0.956 | 0.956 | 0.671 | 0.0 | |
| Q9LVK9 | 1243 | Putative phospholipid-tra | no | no | 0.976 | 0.934 | 0.572 | 0.0 | |
| Q9LNQ4 | 1216 | Putative phospholipid-tra | no | no | 0.983 | 0.961 | 0.572 | 0.0 | |
| Q9SGG3 | 1228 | Putative phospholipid-tra | no | no | 0.985 | 0.954 | 0.572 | 0.0 | |
| Q9SLK6 | 1240 | Phospholipid-transporting | no | no | 0.979 | 0.939 | 0.558 | 0.0 | |
| Q9XIE6 | 1213 | Phospholipid-transporting | no | no | 0.910 | 0.892 | 0.479 | 0.0 |
| >sp|Q9SX33|ALA9_ARATH Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 1830 bits (4740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 854/1187 (71%), Positives = 1005/1187 (84%), Gaps = 20/1187 (1%)
Query: 10 HFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVRTTKYTLAT 69
S+++ +C + FK DHS IGGPGFSRVV+CN+P+S EA NYS NYVRTTKYTLAT
Sbjct: 14 QLSKLYTLTCAQACFKQDHSQIGGPGFSRVVYCNEPDSPEADSRNYSDNYVRTTKYTLAT 73
Query: 70 FFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRRK 129
F PK+LFEQFRRVAN YFL+ +L+FTPL+PY+A S ++PL+ VIGATM KE +EDWRR+
Sbjct: 74 FLPKSLFEQFRRVANFYFLVTGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGVEDWRRQ 133
Query: 130 KQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYV 189
KQD EVNNRKVKVH G+G+FD +W+ L +GD+VKVEK+EFFPADL+LLSSSYE+AICYV
Sbjct: 134 KQDNEVNNRKVKVHRGDGSFDAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYEDAICYV 193
Query: 190 ETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYP 249
ET NLDGETNLK+KQ L+ TS++ ++ NF+ F+A ++CEDPNANLY+FVG++EL+ +YP
Sbjct: 194 ETMNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYP 253
Query: 250 LTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGI 309
L+PQQLLLRDSKLRNTD I+GAVIFTG DTKV QNST PPSKRS +E++MDKIIY +F +
Sbjct: 254 LSPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFM 313
Query: 310 LVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYG 369
++ M+FIGS+ FG+ TR+DL+DG MKRWYLRPD ++ ++DPKRA VAA+ HFLTA+MLY
Sbjct: 314 VITMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYS 373
Query: 370 YLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTG 429
Y IPISLYVSIEIVK+LQSIFINQD+HMYYEE DKPARARTSNLNEELGQVDTILSDKTG
Sbjct: 374 YFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTG 433
Query: 430 TLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL--------------EEEVTEEQ 475
TLTCNSMEFIKCS+AGT+YGRGVTEVE AM RRKG PL +E +TEE
Sbjct: 434 TLTCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITEE- 492
Query: 476 EDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAES 535
+++KGFNF DERIMNG+WV E HADVIQKF RLLA+CHT +PEVDE+ KISYEAES
Sbjct: 493 ---STVKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAES 549
Query: 536 PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVI 595
PDEAAFVIAARELGFEF+ RTQT+ISV ELD V+G +VER Y +LNVLEF+S+RKRMSVI
Sbjct: 550 PDEAAFVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMSVI 609
Query: 596 VRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKE 655
V+ E+G LLLL KGAD+VMFERL++NGREFEE+T++H+NEYADAGLRTLILAYRELDEKE
Sbjct: 610 VQEEDGKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEKE 669
Query: 656 YKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQA 715
YK FNE +EAK+SVSADRE L EE+ EKIEK+LILLGATAVEDKLQNGVP+CIDKLAQA
Sbjct: 670 YKVFNERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQA 729
Query: 716 GIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKAS 775
GIK+WVLTGDKMETAINIGFACSLLRQ M+Q+II+ ETPE ++LEK+ +K A A K +
Sbjct: 730 GIKIWVLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKEN 789
Query: 776 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 835
VL Q+I GK L S + ALIIDGKSL YAL+DD+K +FLELA+ CASVICCRSSP
Sbjct: 790 VLSQIINGKTQLKYSGGN--AFALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSSP 847
Query: 836 KQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895
KQKALVTRLVK+ TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR
Sbjct: 848 KQKALVTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 907
Query: 896 FLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNV 955
+LERLLLVHGHWCYRRIS+MICYFFYKNI FGFTLF +E Y +FS P YNDWFLSLYNV
Sbjct: 908 YLERLLLVHGHWCYRRISTMICYFFYKNITFGFTLFLYETYTTFSSTPAYNDWFLSLYNV 967
Query: 956 FFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFF 1015
FF+SLPVIALGVFDQDVSAR+CLKFPLLYQEGVQN+LFSW RILGW NG +A IIFF
Sbjct: 968 FFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILGWMFNGFYSAVIIFFL 1027
Query: 1016 CIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFW 1075
C +++ QAF G+ G EILG TMYTC+VWVVN QMAL+++YFT IQH+ IW I W
Sbjct: 1028 CKSSLQSQAFNHDGKTPGREILGGTMYTCIVWVVNLQMALAISYFTLIQHIVIWSSIVVW 1087
Query: 1076 YIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPL 1135
Y F+ YG + IST AYKVF+EA AP+ S+WLITL V++++L+PYF YSA+QM FFP+
Sbjct: 1088 YFFITVYGELPSRISTGAYKVFVEALAPSLSYWLITLFVVVATLMPYFIYSALQMSFFPM 1147
Query: 1136 HHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEASSRDLK 1182
+H MIQW R +GQ +DPE+C +VRQRS+RPTTVG+TAR EA R ++
Sbjct: 1148 YHGMIQWLRYEGQCNDPEYCDIVRQRSIRPTTVGFTARLEAKKRSVR 1194
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|Q9LI83|ALA10_ARATH Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1805 bits (4674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 847/1185 (71%), Positives = 1002/1185 (84%), Gaps = 6/1185 (0%)
Query: 10 HFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVRTTKYTLAT 69
H S+I++++CGK+SF+ DHS IGGPGFSRVV+CN+P S A NY+GNYVR+TKYT+A+
Sbjct: 12 HLSKIYSYTCGKSSFQEDHSNIGGPGFSRVVYCNEPGSPAAERRNYAGNYVRSTKYTVAS 71
Query: 70 FFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRRK 129
FFPK+LFEQFRRVAN YFL+ ILS T LSPY AVS +LPL +VI ATM KE +EDWRRK
Sbjct: 72 FFPKSLFEQFRRVANFYFLVTGILSLTDLSPYGAVSALLPLALVISATMVKEGIEDWRRK 131
Query: 130 KQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYV 189
+QDIEVNNRKVKVH G G F +WR+L+VGD+V+VEKDEFFPADL+LLSSSYE+++CYV
Sbjct: 132 QQDIEVNNRKVKVHDGNGIFRQEEWRNLRVGDIVRVEKDEFFPADLLLLSSSYEDSVCYV 191
Query: 190 ETTNLDGETNLKLKQALDATSNM-HEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQY 248
ET NLDGETNLK+KQ L+ATS++ ++DS+F++F+ ++RCEDPN NLY FVG+L LEE+++
Sbjct: 192 ETMNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEERF 251
Query: 249 PLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFG 308
PL+ QQ+LLRDSKLRNT+ +YGAV+FTG DTKV QNST PPSKRS++ER MDKIIY +FG
Sbjct: 252 PLSIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMFG 311
Query: 309 ILVLMSFIGSIFFGIATRED-LQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALML 367
++ LMSF+GSI FG+ TRED +++G+ +RWYL+PDD ++DP+RA +AA+ HF TA ML
Sbjct: 312 LVFLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIYHFFTATML 371
Query: 368 YGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDK 427
Y Y IPISLYVSIEIVK+LQSIFIN+D+HMYYEETDKPA+ARTSNLNEELG VDTILSDK
Sbjct: 372 YSYFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEELGMVDTILSDK 431
Query: 428 TGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMA-RRKGSPLEEEVTEEQEDKAS--IKGF 484
TGTLTCNSMEFIKCSIAG +YGRG+TEVERAMA R GSPL E + D++ +KGF
Sbjct: 432 TGTLTCNSMEFIKCSIAGKAYGRGITEVERAMAVRSGGSPLVNEDLDVVVDQSGPKVKGF 491
Query: 485 NFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIA 544
NFEDER+MNG+WV +P A V+QKF RLLA+CHTA+PE DEE+G +SYEAESPDEAAFV+A
Sbjct: 492 NFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIPETDEESGNVSYEAESPDEAAFVVA 551
Query: 545 ARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLL 604
ARE GFEF+ RTQ IS ELD V+G KVER Y LLNVLEF+S+RKRMSVIVR ++G LL
Sbjct: 552 AREFGFEFFNRTQNGISFRELDLVSGEKVERVYRLLNVLEFNSTRKRMSVIVRDDDGKLL 611
Query: 605 LLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFT 664
LLSKGAD+VMFERLA+NGR+FE +T+EH+N+YADAGLRTL+LAYRE+DE EY +FN+ F
Sbjct: 612 LLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAGLRTLVLAYREVDENEYIEFNKSFN 671
Query: 665 EAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTG 724
EAK SVS DRE L +EI +K+E++LILLGATAVEDKLQNGVPECIDKLAQAGIK+WVLTG
Sbjct: 672 EAKASVSEDREALIDEITDKMERDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTG 731
Query: 725 DKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGK 784
DKMETAINIGFA SLLRQ M+Q+II+ ETP+ K+LEKS K A + SV+ QL GK
Sbjct: 732 DKMETAINIGFASSLLRQEMKQIIINLETPQIKSLEKSGGKDEIELASRESVVMQLQEGK 791
Query: 785 ELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRL 844
LL +S S ALIIDGKSLTYALED++K +FL+LA CASVICCRSSPKQKALVTRL
Sbjct: 792 ALLAASGASSEAFALIIDGKSLTYALEDEIKKMFLDLATSCASVICCRSSPKQKALVTRL 851
Query: 845 VKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVH 904
VK+ T TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR+LERLLLVH
Sbjct: 852 VKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVH 911
Query: 905 GHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIA 964
GHWCY RI+SMICYFFYKNI FG T+F +EAY SFSGQP YNDWFLSL+NVFF+SLPVIA
Sbjct: 912 GHWCYSRIASMICYFFYKNITFGVTVFLYEAYTSFSGQPAYNDWFLSLFNVFFSSLPVIA 971
Query: 965 LGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQA 1024
LGVFDQDVSARFC KFPLLYQEGVQNILFSW RI+GW NG +A IFF C ++K Q
Sbjct: 972 LGVFDQDVSARFCYKFPLLYQEGVQNILFSWKRIIGWMFNGFISALAIFFLCKESLKHQL 1031
Query: 1025 FRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGA 1084
F G+ G EILG TMYTCVVWVVN QMALS++YFT++QH+ IWG I FWYIFL+ YGA
Sbjct: 1032 FDPDGKTAGREILGGTMYTCVVWVVNLQMALSISYFTWVQHIVIWGSIAFWYIFLMIYGA 1091
Query: 1085 MDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFR 1144
M P ST AY VF+EA APAPS+WL TL V++ +L+PYF Y ++QMRFFP +HQMIQW R
Sbjct: 1092 MTPSFSTDAYMVFLEALAPAPSYWLTTLFVMIFALIPYFVYKSVQMRFFPKYHQMIQWIR 1151
Query: 1145 SDGQTDDPEFCQMVRQRSLRPTTVGYTARFEASSRDLKAKLEDSL 1189
+G ++DPEF +MVRQRS+RPTTVGYTAR AS R A+ D +
Sbjct: 1152 YEGHSNDPEFVEMVRQRSIRPTTVGYTARRAASVRR-SARFHDQI 1195
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SAF5|ALA11_ARATH Putative phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1759 bits (4557), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 839/1187 (70%), Positives = 982/1187 (82%), Gaps = 8/1187 (0%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
M RR++ H S I+AF K++F+ DHS IGGPGFSRVV+CN+P S A NY GNYV
Sbjct: 1 MTKCRRRRLHLSNIYAFKGRKSNFQEDHSHIGGPGFSRVVYCNEPNSPAAERRNYVGNYV 60
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
R+TKYTLA+F PK+LFEQFRRVAN YFL+ +LS T LSPYS +S +LPL VI A+M K
Sbjct: 61 RSTKYTLASFIPKSLFEQFRRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMVK 120
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
E +EDW RKKQDIE+NNRKVKVH G G F WRDLKVG++V+VEKDEFFPADL+LLSS
Sbjct: 121 EAIEDWGRKKQDIEMNNRKVKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLSS 180
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSN-MHEDSNFQNFKAIIRCEDPNANLYTFVG 239
SYE++ICYVET NLDGETNLK+KQ L+ATS+ +HEDS+F+ KA+++CEDPNA+LYTFVG
Sbjct: 181 SYEDSICYVETMNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVG 240
Query: 240 SLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRM 299
+L EEQ+ PL+ QLLLRDSKLRNT+ IYG V+FTG DTKV QNST PPSKRS++ER+M
Sbjct: 241 TLHFEEQRLPLSITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKM 300
Query: 300 DKIIYFLFGILVLMSFIGSIFFGIATREDL--QDGKMKRWYLRPDDTTAYYDPKRAAVAA 357
DKIIY +FG++ LMSFIGSI FGI TRED G+ +RWYLRPD+ ++DP RA +AA
Sbjct: 301 DKIIYLMFGVVFLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMAA 360
Query: 358 VLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEEL 417
V HF TA+MLY Y IPISLYVSIEIVK+LQS+FIN D+ MYYEE DKPA ARTSNLNEEL
Sbjct: 361 VYHFFTAVMLYSYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEEL 420
Query: 418 GQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMA-RRKGSPLEEEVTEEQE 476
G VDTILSDKTGTLTCNSMEFIKCSIAGT+YGRG+TEVER+MA R GS L + +
Sbjct: 421 GMVDTILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVERSMAMRSNGSSLVGDDLDVVV 480
Query: 477 DKAS--IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
D++ IKGFNF DER+M G+WV + A V+QKF RLLA+CHTA+PE DE G +SYEAE
Sbjct: 481 DQSGPKIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSYEAE 540
Query: 535 SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV 594
SPDEAAFV+AARE GFEF+ RTQ IS ELD +G VER Y LLNVLEF+S+RKRMSV
Sbjct: 541 SPDEAAFVVAAREFGFEFFSRTQNGISFRELDLASGKTVERVYRLLNVLEFNSARKRMSV 600
Query: 595 IVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEK 654
IVR E+G LLLLSKGAD+VMFERLA+NGR+FEE+T+EH+NEYADAGLRTLILAYRE+DE
Sbjct: 601 IVRDEDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREVDEN 660
Query: 655 EYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 714
EY +F++ F EAKNSV+ADRE L +EI E++E++LILLGATAVEDKLQNGVP+CIDKLAQ
Sbjct: 661 EYIEFSKNFNEAKNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDKLAQ 720
Query: 715 AGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKA 774
AGIK+WVLTGDKMETAINIGFACSLLRQ M+Q+II+ ETP K LEK+ +K A A +
Sbjct: 721 AGIKIWVLTGDKMETAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHASRE 780
Query: 775 SVLHQLIRGKELLDSSNESLG--PLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR 832
SV++Q+ GK LL +S+ + ALIIDGKSLTYALEDD K FL+LA GCASVICCR
Sbjct: 781 SVVNQMEEGKALLTASSSASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVICCR 840
Query: 833 SSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA 892
SSPKQKALVTRLVK+ T TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA
Sbjct: 841 SSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA 900
Query: 893 QFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSL 952
QFR+LERLLLVHGHWCY RISSMICYFFYKNI FG T+F +EAY SFS QP YNDWFLSL
Sbjct: 901 QFRYLERLLLVHGHWCYSRISSMICYFFYKNITFGVTVFLYEAYTSFSAQPAYNDWFLSL 960
Query: 953 YNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAII 1012
+NVFF+SLPVIALGVFDQDVSAR+C KFPLLYQEGVQN+LFSW RI+GW NGV A I
Sbjct: 961 FNVFFSSLPVIALGVFDQDVSARYCYKFPLLYQEGVQNLLFSWKRIIGWMFNGVFTALAI 1020
Query: 1013 FFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGI 1072
FF C ++K Q + G+ G EILG TMYTCVVWVVN QMAL+++YFT++QH+ IWG +
Sbjct: 1021 FFLCKESLKHQLYNPNGKTAGREILGGTMYTCVVWVVNLQMALAISYFTWLQHIVIWGSV 1080
Query: 1073 TFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 1132
FWYIFL+ YGA+ P ST AYKVFIEA APAPS+WL TL V+ +L+P+F + ++QMRF
Sbjct: 1081 AFWYIFLMIYGAITPSFSTDAYKVFIEALAPAPSYWLTTLFVMFFALIPFFVFKSVQMRF 1140
Query: 1133 FPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEASSR 1179
FP +HQMIQW R +G ++DPEF +MVRQRS+RPTTVG+TAR AS R
Sbjct: 1141 FPGYHQMIQWIRYEGHSNDPEFVEMVRQRSIRPTTVGFTARRAASVR 1187
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P57792|ALA12_ARATH Putative phospholipid-transporting ATPase 12 OS=Arabidopsis thaliana GN=ALA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1740 bits (4506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 824/1174 (70%), Positives = 977/1174 (83%), Gaps = 7/1174 (0%)
Query: 1 MAGNRRKKH-HFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNY 59
++G RRK+ S++ + K FK DHS IG GFSRVV CN P+S EA NY NY
Sbjct: 4 VSGRRRKRKIQLSKLFTLTGAKACFKPDHSKIGRSGFSRVVFCNQPDSPEAESRNYCDNY 63
Query: 60 VRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMG 119
VRTTKYTLATF PK+LFEQFRRVAN YFL+ ILSFTPL+PY+AVS ++PL VI ATM
Sbjct: 64 VRTTKYTLATFLPKSLFEQFRRVANFYFLVVGILSFTPLAPYTAVSAIVPLTFVILATMF 123
Query: 120 KEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLS 179
KE +EDWRRK+QDIEVNNRKV+VH G G FD +W+ L+VGD++KVEK+EFFPADL+LLS
Sbjct: 124 KEGVEDWRRKQQDIEVNNRKVRVHRGNGNFDLREWKTLRVGDILKVEKNEFFPADLVLLS 183
Query: 180 SSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVG 239
SSYE+A+CYVET NLDGETNLKLKQ L+ T ++ E+ NF++F+A I+CEDPNANLY+FVG
Sbjct: 184 SSYEDAVCYVETMNLDGETNLKLKQGLEVTLSLREELNFRDFEAFIKCEDPNANLYSFVG 243
Query: 240 SLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRM 299
+++L+ ++YPL+PQQLLLR SKLRNTD IYG VIFTG DTKV QNST PPSKRS +ER+M
Sbjct: 244 TMDLKGEKYPLSPQQLLLRGSKLRNTDYIYGVVIFTGPDTKVVQNSTDPPSKRSMIERKM 303
Query: 300 DKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVL 359
DKIIY +F ++ ++F GS+ FGI TR+D Q+G M+RWYL+PDD++ ++DPKRA +AA+
Sbjct: 304 DKIIYLMFLMVFSLAFFGSVLFGIWTRDDFQNGVMERWYLKPDDSSIFFDPKRAPMAAIY 363
Query: 360 HFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQ 419
HFLTALML Y IPISLYVSIEIVK+LQSIFINQD+HMYYEE DKPA ARTSNLNEELGQ
Sbjct: 364 HFLTALMLNSYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQ 423
Query: 420 VDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 479
V TILSDKTGTLTCNSMEFIKCSIAGT+YGRGVTEVE AM +RKGS L + + A
Sbjct: 424 VGTILSDKTGTLTCNSMEFIKCSIAGTAYGRGVTEVEMAMDKRKGSALVNQSNGNSTEDA 483
Query: 480 -----SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
++KGFNF DERIM+G+WV E HADVIQKF +LLA+CHT +PEVDE+ GKISYEAE
Sbjct: 484 VAAEPAVKGFNFRDERIMDGNWVTETHADVIQKFFQLLAVCHTVIPEVDEDTGKISYEAE 543
Query: 535 SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV 594
SPDEAAFVIAARELGFEF+ RTQT+ISV ELD VTG +VER YS+LNVLEFSSS+KRMSV
Sbjct: 544 SPDEAAFVIAARELGFEFFTRTQTTISVRELDLVTGERVERLYSVLNVLEFSSSKKRMSV 603
Query: 595 IVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEK 654
IV+ ++G LLLL KGADSVMFERL+E+GR++E++T++H+NEYADAGLRTLILAYRELDE
Sbjct: 604 IVQDQDGKLLLLCKGADSVMFERLSESGRKYEKETRDHVNEYADAGLRTLILAYRELDEN 663
Query: 655 EYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 714
EY+ F E +EAKNSVSADRE L +E+ EKIEKNL+LLGATAVEDKLQNGVP+CI+KLAQ
Sbjct: 664 EYEVFTERISEAKNSVSADREALIDEVTEKIEKNLVLLGATAVEDKLQNGVPDCINKLAQ 723
Query: 715 AGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKA 774
AGIK+WVLTGDKMETAINIGFACSLLR+ M+Q+II+ ETPE + LEKS +K A AALK
Sbjct: 724 AGIKIWVLTGDKMETAINIGFACSLLRRDMKQIIINLETPEIQQLEKSGEKD-AIAALKE 782
Query: 775 SVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS 834
+VLHQ+ GK L +S + ALIIDGKSL YALE+D+K +FLELAIGCASVICCRSS
Sbjct: 783 NVLHQITSGKAQLKASGGNAKAFALIIDGKSLAYALEEDMKGIFLELAIGCASVICCRSS 842
Query: 835 PKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894
PKQKALVTRLVKT + TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF
Sbjct: 843 PKQKALVTRLVKTGSGQTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 902
Query: 895 RFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYN 954
R+LERLLLVHGHWCYRRIS MICYFFYKNI FGFTLF +EAY SFS P YNDW+LSLY+
Sbjct: 903 RYLERLLLVHGHWCYRRISKMICYFFYKNITFGFTLFLYEAYTSFSATPAYNDWYLSLYS 962
Query: 955 VFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFF 1014
VFFTSLPVI LG+FDQDVSA FCLKFP+LYQEGVQN+LFSW RIL W +G +A IIFF
Sbjct: 963 VFFTSLPVICLGIFDQDVSAPFCLKFPVLYQEGVQNLLFSWRRILSWMFHGFCSAIIIFF 1022
Query: 1015 FCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITF 1074
C +++ QAF G+ G +ILG TMYTCVVWVV+ QM L+++YFT IQH+ +WG +
Sbjct: 1023 LCKTSLESQAFNHEGKTAGRDILGGTMYTCVVWVVSLQMVLTISYFTLIQHVVVWGSVVI 1082
Query: 1075 WYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFP 1134
WY+FL+ YG++ +ST AY VF+EA APAPS+W+ TL V++S+++PYF +SAIQMRFFP
Sbjct: 1083 WYLFLMVYGSLPIRMSTDAYMVFLEALAPAPSYWITTLFVVLSTMMPYFIFSAIQMRFFP 1142
Query: 1135 LHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTV 1168
+ H +Q R + Q + +M RQ S+RPT V
Sbjct: 1143 MSHGTVQLLRYEDQCSNSGNFEMGRQGSVRPTLV 1176
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1647 bits (4266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 772/1150 (67%), Positives = 952/1150 (82%), Gaps = 13/1150 (1%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
MAG RRK FS++++F C K + DHS IG G+SRVV CNDP++ EA LNY GNYV
Sbjct: 1 MAGERRKGMKFSKLYSFKCFKPFSREDHSQIGSRGYSRVVFCNDPDNPEALQLNYRGNYV 60
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
TTKYT A F PK+LFEQFRRVAN+YFL+ A +SF+PL+PY+A S + PL++VIGATM K
Sbjct: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYTAPSVLAPLLIVIGATMVK 120
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
E +ED RR+KQD+E NNRKV+V G F TKW++L+VGD+VKV KDE+FPADL+LLSS
Sbjct: 121 EGVEDLRRRKQDVEANNRKVEVLGKTGTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
SYE+ ICYVET NLDGETNLKLK AL+ TS ++ + +NF+ +I+CEDPN +LY+FVG+
Sbjct: 181 SYEDGICYVETMNLDGETNLKLKHALEITS---DEESIKNFRGMIKCEDPNEHLYSFVGT 237
Query: 241 LELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
L E +QYPL+PQQ+LLRDSKL+NTD +YG V+FTG DTKV QN+T PPSKRSK+E++MD
Sbjct: 238 LYFEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIEKKMD 297
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQD-GKMKRWYLRPDDTTAYYDPKRAAVAAVL 359
+IIY LF IL++++F GS+FFGIATR D+ D GK++RWYLRPD TT +YDP+RA AA
Sbjct: 298 QIIYILFSILIVIAFTGSVFFGIATRRDMSDNGKLRRWYLRPDHTTVFYDPRRAVAAAFF 357
Query: 360 HFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQ 419
HFLTALMLYGYLIPISLYVSIE+VK+LQSIFINQD MY+EETD+PARARTSNLNEELGQ
Sbjct: 358 HFLTALMLYGYLIPISLYVSIEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQ 417
Query: 420 VDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQ---- 475
VDTILSDKTGTLTCNSMEF+KCSIAGT+YGRG+TEVE A+ ++KG +EEV + +
Sbjct: 418 VDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVEVALRKQKGLMTQEEVGDNESLSI 477
Query: 476 EDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAES 535
+++ ++KGFNF DERI++G W+N+P+A++IQKF R+LAICHTA+P+V+ + G+I+YEAES
Sbjct: 478 KEQKAVKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICHTAIPDVNSDTGEITYEAES 537
Query: 536 PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVI 595
PDEAAFVIA+RELGFEF+ R+QTSIS+HE+D +TG KV+R Y LL+VLEFSSSRKRMSVI
Sbjct: 538 PDEAAFVIASRELGFEFFSRSQTSISLHEIDHMTGEKVDRVYELLHVLEFSSSRKRMSVI 597
Query: 596 VRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKE 655
VR+ E LLLLSKGADSVMF+RLA++GR+ E +TKEHI +YA+AGLRTL++ YRE+DE E
Sbjct: 598 VRNPENRLLLLSKGADSVMFKRLAKHGRQNERETKEHIKKYAEAGLRTLVITYREIDEDE 657
Query: 656 YKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQA 715
Y + EEF AK V+ DR+ L + A+KIEK+LILLG+TAVEDKLQ GVP+CI+KL+QA
Sbjct: 658 YIVWEEEFLNAKTLVTEDRDALIDAAADKIEKDLILLGSTAVEDKLQKGVPDCIEKLSQA 717
Query: 716 GIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKAS 775
G+K+WVLTGDK ETAINIG+ACSLLR+GM+Q++++ ++ + + LEK DK A A A S
Sbjct: 718 GVKIWVLTGDKTETAINIGYACSLLREGMKQILVTLDSSDIEALEKQGDKEAVAKASFQS 777
Query: 776 VLHQLIRGKELL-----DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVIC 830
+ QL G +S+ E+ L+IDGKSLTYAL+ ++ FLELAI C SVIC
Sbjct: 778 IKKQLREGMSQTAAVTDNSAKENSEMFGLVIDGKSLTYALDSKLEKEFLELAIRCNSVIC 837
Query: 831 CRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIA 890
CRSSPKQKALVTRLVK T TTLAIGDGANDVGMLQEADIGVGISG EGMQAVM+SD A
Sbjct: 838 CRSSPKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFA 897
Query: 891 IAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFL 950
IAQFRFLERLLLVHGHWCYRRI+ MICYFFYKN+AFGFTLF++EAYASFSG+P YNDW++
Sbjct: 898 IAQFRFLERLLLVHGHWCYRRITLMICYFFYKNLAFGFTLFWYEAYASFSGKPAYNDWYM 957
Query: 951 SLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAA 1010
S YNVFFTSLPVIALGVFDQDVSAR CLK+PLLYQEGVQN+LFSW RILGW LNGV ++
Sbjct: 958 SCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNVLFSWERILGWMLNGVISSM 1017
Query: 1011 IIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWG 1070
IIFF I+ M QAFRK G+V+ +LG TMY+ VVW VNCQMA+S+ YFT+IQH FIWG
Sbjct: 1018 IIFFLTINTMATQAFRKDGQVVDYSVLGVTMYSSVVWTVNCQMAISINYFTWIQHCFIWG 1077
Query: 1071 GITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQM 1130
I WY+FL+ YG++ P STTA++VF+E AP+P +WL+ LV+ S+LLPYFTY A Q+
Sbjct: 1078 SIGVWYLFLVIYGSLPPTFSTTAFQVFVETSAPSPIYWLVLFLVVFSALLPYFTYRAFQI 1137
Query: 1131 RFFPLHHQMI 1140
+F P++H +I
Sbjct: 1138 KFRPMYHDII 1147
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 1438 bits (3722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 700/1222 (57%), Positives = 877/1222 (71%), Gaps = 61/1222 (4%)
Query: 8 KHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVRTTKYTL 67
K HF +G H +I GPG++R+VHCN P A VL Y+ NYV TT+Y L
Sbjct: 12 KSHFYTFKCLRPKTLEDQGPH-IINGPGYTRIVHCNQPHLHLAKVLRYTSNYVSTTRYNL 70
Query: 68 ATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWR 127
TF PK L+EQF RVAN YFL+ AILS PLSP++ S + PL+ V+G +MGKE LEDWR
Sbjct: 71 ITFLPKCLYEQFHRVANFYFLVAAILSVFPLSPFNKWSMIAPLIFVVGLSMGKEALEDWR 130
Query: 128 RKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAIC 187
R QD++VN+RK VH G+G F KW+ L+VGDVVKVEKD+FFPADL+LLSSSYE+ IC
Sbjct: 131 RFMQDVKVNSRKATVHRGDGDFGRRKWKKLRVGDVVKVEKDQFFPADLLLLSSSYEDGIC 190
Query: 188 YVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQ 247
YVET NLDGETNLK+K+ LD T + D FQ+F I+CEDPN NLYTFVG+LE + Q
Sbjct: 191 YVETMNLDGETNLKVKRCLDVTLPLERDDTFQSFSGTIKCEDPNPNLYTFVGNLEYDGQV 250
Query: 248 YPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLF 307
YPL P Q+LLRDSKLRNT +YG V+FTG DTKV QNST PSKRS++E+RMD IIY LF
Sbjct: 251 YPLDPSQILLRDSKLRNTSYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLF 310
Query: 308 GILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALML 367
+LVL+SFI S+ F + T+ + D WYLRPD +P+ A V+H +TA++L
Sbjct: 311 ALLVLVSFISSLGFAVMTKMHMGDW----WYLRPDKPERLTNPRNPFHAWVVHLITAVLL 366
Query: 368 YGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDK 427
YGYLIPISLYVSIE+VK+LQ+ FINQDL MY E+ PA+ARTSNLNEELGQVDTILSDK
Sbjct: 367 YGYLIPISLYVSIELVKVLQATFINQDLQMYDSESGTPAQARTSNLNEELGQVDTILSDK 426
Query: 428 TGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE------------- 474
TGTLTCN M+F+KCSIAGTSYG +EVE A A++ L+EE EE
Sbjct: 427 TGTLTCNQMDFLKCSIAGTSYGVRASEVELAAAKQMAIDLDEEQGEEVTHLPRTRGRMHG 486
Query: 475 -------------------------QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFL 509
Q IKGF+FED+R+M G+W+NEP++D I FL
Sbjct: 487 YAKMPSKTSSDIELETVITATDEGDQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDILMFL 546
Query: 510 RLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVT 569
R+LA+CHTA+PEVDE+ GK +YEAESPDE AF++AA E GFEF +RTQ+S+ + E +
Sbjct: 547 RILAVCHTAIPEVDEDTGKCTYEAESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH--S 604
Query: 570 GTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQT 629
G VER Y +LNVL+F+S RKRMSVIVR E+G +LLL KGADS++FERL++NG+ + E T
Sbjct: 605 GQPVEREYKVLNVLDFTSKRKRMSVIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEAT 664
Query: 630 KEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNL 689
+H+N Y +AGLRTL L+YR+LDE EY +N EF +AK SV ADR+E+ E++++ +EK L
Sbjct: 665 SKHLNGYGEAGLRTLALSYRKLDETEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKEL 724
Query: 690 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVII 749
IL+GATAVEDKLQ GVP+CIDKLAQAG+K+WVLTGDKMETAINIG+ACSLLRQGM+Q+ I
Sbjct: 725 ILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIYI 784
Query: 750 SSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYA 809
+ E S+D AAA + ++L Q+I +++ + ALIIDGK+LTYA
Sbjct: 785 ALRNEEGS----SQDPEAAA---RENILMQIINASQMIKLEKDPHAAFALIIDGKTLTYA 837
Query: 810 LEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEA 869
LEDD+K FL LA+ CASVICCR SPKQKALVTRL K T TTLAIGDGANDVGM+QEA
Sbjct: 838 LEDDIKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEA 897
Query: 870 DIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFT 929
DIGVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKNI FG T
Sbjct: 898 DIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLT 957
Query: 930 LFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQ 989
LF+FEA+ FSGQ +YND +L L+NV TSLPVIALGVF+QDVS+ CL+FP LYQ+G +
Sbjct: 958 LFYFEAFTGFSGQAIYNDSYLLLFNVILTSLPVIALGVFEQDVSSEVCLQFPALYQQGPK 1017
Query: 990 NILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVV 1049
N+ F W RI+GW NGV + +IF I Q+F GG+ ++ +GT M+TC++W V
Sbjct: 1018 NLFFDWYRIIGWMANGVYASVVIFSLNIGIFHVQSFCSGGQTADMDAMGTAMFTCIIWAV 1077
Query: 1050 NCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWL 1109
N Q+AL++++FT+IQH+ IWG I WYIFL +G + P +S + + E APAP FWL
Sbjct: 1078 NVQIALTMSHFTWIQHVLIWGSIVTWYIFLALFGMLPPKVSGNIFHMLSETLAPAPIFWL 1137
Query: 1110 ITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQ---WFRSDGQTDDPEFCQMVRQRS--LR 1164
+LLV+ ++ LPY Y + Q PL H +IQ FR D Q + C R+RS
Sbjct: 1138 TSLLVIAATTLPYLAYISFQRSLNPLDHHIIQEIKHFRIDVQDE----CMWTRERSKARE 1193
Query: 1165 PTTVGYTARFEASSRDLKAKLE 1186
T +G TAR +A R L+ +L+
Sbjct: 1194 KTKIGVTARVDAKIRQLRGRLQ 1215
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1424 bits (3685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 690/1206 (57%), Positives = 878/1206 (72%), Gaps = 37/1206 (3%)
Query: 3 GNRRKKHHFSRIHAFSCGKTSFK--GDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
G R K S I+ F C + S D I GPGFSR V+CN P + L Y NYV
Sbjct: 4 GRIRSKLRLSHIYTFGCLRPSADEGQDPHPIQGPGFSRTVYCNQPHMHKKKPLKYRSNYV 63
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
TT+Y L TFFPK L+EQF R AN YFL+ AILS PLSP++ S + PLV V+G +M K
Sbjct: 64 STTRYNLITFFPKCLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLK 123
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
E LEDW R QD+++N KV VH +G F KW+ + VGD+VKVEKD FFPADL+LLSS
Sbjct: 124 EALEDWSRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLLLSS 183
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
SYE+ ICYVET NLDGETNLK+K++L+ T ++ + +F++F IIRCEDPN +LYTFVG+
Sbjct: 184 SYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTFVGN 243
Query: 241 LELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
LE E Q +PL P Q+LLRDSKLRNT +YG V+FTG DTKV QNST PSKRS++E+ MD
Sbjct: 244 LEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKTMD 303
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
IIY L +L+L+S I S F T+ + K WYLRP++ +P A +H
Sbjct: 304 YIIYTLLVLLILISCISSSGFAWETKFHMP----KWWYLRPEEPENLTNPSNPVYAGFVH 359
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
+TAL+LYGYLIPISLYVSIE+VK+LQ+ FIN+DLHMY E+ PA ARTSNLNEELGQV
Sbjct: 360 LITALLLYGYLIPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQV 419
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEE----------- 469
DTILSDKTGTLTCN M+F+KCSIAGTSYG +EVE A A++ L+E
Sbjct: 420 DTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTP 479
Query: 470 -------EVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEV 522
EV + IKGF FED R+M+G+W+ EPH D I F R+LAICHTA+PE+
Sbjct: 480 RAQARDIEVESSITPRIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIPEL 539
Query: 523 DEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNV 582
+EE GK +YEAESPDEA+F+ AA E GF F++RTQ+S+ VHE +G +ER Y +LN+
Sbjct: 540 NEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREYKVLNL 599
Query: 583 LEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLR 642
L+F+S RKRMSV+VR EEG +LLL KGADS++FERLA+NG+ + T +H+NEY +AGLR
Sbjct: 600 LDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYGEAGLR 659
Query: 643 TLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQ 702
TL L+YR+LDE+EY +N EF +AK S+ +DR+EL E I++ IEK+LIL+GATAVEDKLQ
Sbjct: 660 TLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDKLQ 719
Query: 703 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKS 762
GVP+CIDKLAQAG+KLWVLTGDKMETAINIG++CSLLRQGM+Q+ I T+ S
Sbjct: 720 KGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICI--------TVVNS 771
Query: 763 EDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA 822
E S A A+K ++L+Q+ + +++ + ALIIDGK+LTYALED++K FL LA
Sbjct: 772 EGASQDAKAVKDNILNQITKAVQMVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALA 831
Query: 823 IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 882
+ CASVICCR SPKQKALVTRLVK T TLAIGDGANDVGM+QEADIGVGISGVEGMQ
Sbjct: 832 VDCASVICCRVSPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQ 891
Query: 883 AVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQ 942
AVM+SD +IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKNIAFG TLF+FEA+ FSGQ
Sbjct: 892 AVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQ 951
Query: 943 PVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWA 1002
VYND++L L+NV TSLPVIALGVF+QDVS+ CL+FP LYQ+G +N+ F W RILGW
Sbjct: 952 SVYNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICLQFPALYQQGKKNLFFDWYRILGWM 1011
Query: 1003 LNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTY 1062
NGV ++ +IFF I + +QAFR G+ ++ +GTTM+TC++W VN Q+AL+V++FT+
Sbjct: 1012 GNGVYSSLVIFFLNIGIIYEQAFRVSGQTADMDAVGTTMFTCIIWAVNVQIALTVSHFTW 1071
Query: 1063 IQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPY 1122
IQH+ IWG I WY+F+ YG M P +S Y++ +E APAP +W+ T LV ++++LPY
Sbjct: 1072 IQHVLIWGSIGLWYLFVALYGMMPPSLSGNIYRILVEILAPAPIYWIATFLVTVTTVLPY 1131
Query: 1123 FTYSAIQMRFFPLHHQMIQ---WFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEASSR 1179
F + + Q PL H +IQ +++ D +D R ++ T +G+TAR +A R
Sbjct: 1132 FAHISFQRFLHPLDHHIIQEIKYYKRD--VEDRRMWTRERTKAREKTKIGFTARVDAKIR 1189
Query: 1180 DLKAKL 1185
L++KL
Sbjct: 1190 HLRSKL 1195
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1419 bits (3674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/1215 (57%), Positives = 875/1215 (72%), Gaps = 43/1215 (3%)
Query: 3 GNRRKKHHFSRIHAFSCGK-TSFKG-DHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
G R K S ++ F C + + +G D I GPGFSR V CN P + L Y NYV
Sbjct: 4 GRIRSKLRLSLLYTFGCLRPATLEGQDSQPIQGPGFSRTVFCNQPHMHKKKPLRYRSNYV 63
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
TT+Y L TFFPK+L+EQF R AN+YFL+ AILS PLSP++ S + PLV V+G +M K
Sbjct: 64 STTRYNLITFFPKSLYEQFHRAANLYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLK 123
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
E LEDWRR QD+++N RK VH +G F KW+ + VGD+VKVEKDEFFPADL+LLSS
Sbjct: 124 EALEDWRRFMQDVKINARKTCVHKSDGVFRQRKWKKVSVGDIVKVEKDEFFPADLLLLSS 183
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
SYE+ ICYVET NLDGETNLK+K++L+ + + +D +F+NF A IRCEDPN NLYTFVG+
Sbjct: 184 SYEDGICYVETMNLDGETNLKVKRSLEVSLPLDDDESFKNFMATIRCEDPNPNLYTFVGN 243
Query: 241 LELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
LE E Q +PL P Q+LLRDSKLRNT +YG V+FTG DTKV QNST PSKRS++ER MD
Sbjct: 244 LEFERQTFPLDPSQILLRDSKLRNTTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIERTMD 303
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
IIY L +L+L+S I S F T + K WYLRP + + +P A V+H
Sbjct: 304 YIIYTLLVLLILISCISSSGFAWETEFHMP----KMWYLRPGEPIDFTNPINPIYAGVVH 359
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
+TAL+LYGYLIPISLYVSIE+VK+ Q+ FINQDLHMY +E+ PA ARTSNLNEELGQV
Sbjct: 360 LITALLLYGYLIPISLYVSIEVVKVWQASFINQDLHMYDDESGVPANARTSNLNEELGQV 419
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEE----------- 469
TILSDKTGTLTCN M+F+KCSIAGTSYG +EVE A A++ LEE
Sbjct: 420 HTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQ 479
Query: 470 -------------EVTEEQED-----KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRL 511
E+ E ++ +A IKGF FED R+MNG+W+ E + I +F R+
Sbjct: 480 TKVYGTWDSSRTQEIEVEGDNNYNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRI 539
Query: 512 LAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGT 571
LAICHTA+PE++EE GK +YEAESPDEA+F+ AARE GFEF++RTQ+S+ + E +G
Sbjct: 540 LAICHTAIPELNEETGKYTYEAESPDEASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQ 599
Query: 572 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKE 631
+ER Y +LN+LEF+S RKRM+VIVR EEG +LLL KGADS++FERLA+NG+ + T
Sbjct: 600 IIEREYKVLNLLEFTSKRKRMTVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPTTR 659
Query: 632 HINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLIL 691
H+ EY +AGLRTL LAYR+LDE EY +N EF +AK S+ +DR+EL E A+ IEK LIL
Sbjct: 660 HLTEYGEAGLRTLALAYRKLDEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKELIL 719
Query: 692 LGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISS 751
+GATAVEDKLQ GVP+CIDKLAQAG+KLWVLTGDKMETAINIGFACSLLRQGMRQ+ I+S
Sbjct: 720 IGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICITS 779
Query: 752 ETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALE 811
E S+D + +K ++L+QL + +++ + ALIIDGK+LTYALE
Sbjct: 780 MNSEGG----SQD---SKRVVKENILNQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALE 832
Query: 812 DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADI 871
DD+K FL LA+ CASVICCR SPKQKALV RLVK T TTLAIGDGANDVGM+QEADI
Sbjct: 833 DDMKYQFLALAVDCASVICCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADI 892
Query: 872 GVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 931
GVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKNIAFG TLF
Sbjct: 893 GVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLF 952
Query: 932 FFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNI 991
+FEA+ FSGQ VYND++L L+NV TSLPVIALGVF+QDVS+ CL+FP LYQ+G +N+
Sbjct: 953 YFEAFTGFSGQSVYNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICLQFPALYQQGTKNL 1012
Query: 992 LFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNC 1051
F W+RILGW NGV + +IFF I + QAFR G+ ++ +GTTM+TC++W N
Sbjct: 1013 FFDWSRILGWMCNGVYASLVIFFLNIGIIYSQAFRDNGQTADMDAVGTTMFTCIIWAANV 1072
Query: 1052 QMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLIT 1111
Q+AL++++FT+IQH+ IWG I WY+F+ Y M P S Y++ E APAP +W+ T
Sbjct: 1073 QIALTMSHFTWIQHVLIWGSIGMWYLFVAIYSMMPPSYSGNIYRILDEILAPAPIYWMAT 1132
Query: 1112 LLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQ-TDDPEFCQMVRQRSLRPTTVGY 1170
LLV ++++LPY + A Q PL H +IQ + G+ +D R ++ T +G+
Sbjct: 1133 LLVTVAAVLPYVAHIAFQRFLNPLDHHIIQEIKYYGRDIEDARLWTRERTKAREKTKIGF 1192
Query: 1171 TARFEASSRDLKAKL 1185
TAR +A R L++KL
Sbjct: 1193 TARVDAKIRHLRSKL 1207
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SLK6|ALA6_ARATH Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1406 bits (3640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/1220 (55%), Positives = 870/1220 (71%), Gaps = 55/1220 (4%)
Query: 8 KHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEAS-VLNYSGNYVRTTKYT 66
K HF +G H +I GPG++R+VHCN P A+ ++ Y NYV TT+Y
Sbjct: 12 KSHFYTFRCLRPKTLDDQGPH-VINGPGYTRIVHCNQPHLHLATKLIRYRSNYVSTTRYN 70
Query: 67 LATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDW 126
L TF PK L+EQF RVAN YFL+ AILS PLSP++ S + PLV V+G +MGKE LEDW
Sbjct: 71 LLTFLPKCLYEQFHRVANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMGKEALEDW 130
Query: 127 RRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAI 186
RR QD+EVN+RK VH G G F W+ ++VGD+V+VEKDEFFPADL+LLSSSYE+ I
Sbjct: 131 RRFMQDVEVNSRKASVHKGSGDFGRRTWKRIRVGDIVRVEKDEFFPADLLLLSSSYEDGI 190
Query: 187 CYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQ 246
CYVET NLDGETNLK+K+ LDAT + +D +FQNF I+CEDPN NLYTFVG+LE + Q
Sbjct: 191 CYVETMNLDGETNLKVKRCLDATLALEKDESFQNFSGTIKCEDPNPNLYTFVGNLECDGQ 250
Query: 247 QYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFL 306
YPL P Q+LLRDSKLRNT +YG V+FTG DTKV QNST PSKRS++E+RMD IIY L
Sbjct: 251 VYPLDPNQILLRDSKLRNTAYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTL 310
Query: 307 FGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALM 366
F +L+ +SFI S+ F + T+ + + WYLRPD + +P A V+H +TAL+
Sbjct: 311 FALLLTVSFISSLGFAVMTKLLMAEW----WYLRPDKPESLTNPTNPLYAWVVHLITALL 366
Query: 367 LYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSD 426
LYGYLIPISLYVSIE+VK+LQ+ FINQDL +Y E+ PA+ARTSNLNEELGQVDTILSD
Sbjct: 367 LYGYLIPISLYVSIEVVKVLQAHFINQDLQLYDSESGTPAQARTSNLNEELGQVDTILSD 426
Query: 427 KTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTE------------- 473
KTGTLTCN M+F+KCSIAGTSYG +EVE A A++ LEE+ E
Sbjct: 427 KTGTLTCNQMDFLKCSIAGTSYGVRASEVELAAAKQMAMDLEEKGEEVANLSMNKGRTQR 486
Query: 474 ------------------------EQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFL 509
+Q+ +KGF+FED R+MN +W+NEP++D I F
Sbjct: 487 YAKLASKTSSDFELETVVTASDEKDQKQNTGVKGFSFEDNRLMNENWLNEPNSDDILMFF 546
Query: 510 RLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVT 569
R+LA+CHTA+PEVDE+ G +YEAESPDE AF++A+RE GFEF +RTQ+S+ + E +
Sbjct: 547 RILAVCHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEFTKRTQSSVFIAERFSSS 606
Query: 570 GTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQT 629
G V+R Y +LN+L+F+S RKRMS IVR EEG +LLL KGADS++FERL+++G+E+ T
Sbjct: 607 GQPVDREYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADSIIFERLSKSGKEYLGAT 666
Query: 630 KEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNL 689
+H+N Y +AGLRTL L YR+LDE EY +N EF +AK SV ADR+E+ E++++ +EK L
Sbjct: 667 SKHLNVYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGADRDEMLEKVSDMMEKEL 726
Query: 690 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVII 749
IL+GATAVEDKLQ GVP+CID LAQAG+K+WVLTGDKMETAINIG+ACSLLRQGM+Q+ I
Sbjct: 727 ILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQISI 786
Query: 750 SSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYA 809
S E E S++ AAA K S+L Q+ +++ + ALIIDGK+LTYA
Sbjct: 787 SLTNVE----ESSQNSEAAA---KESILMQITNASQMIKIEKDPHAAFALIIDGKTLTYA 839
Query: 810 LEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEA 869
L+DDVK FL LA+ CASVICCR SPKQKALVTRL K T TTLAIGDGANDVGM+QEA
Sbjct: 840 LKDDVKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEA 899
Query: 870 DIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFT 929
DIGVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKNI FG T
Sbjct: 900 DIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLT 959
Query: 930 LFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQ 989
LF+FE + FSGQ +YND +L L+NV TSLPVI+LGVF+QDV + CL+FP LYQ+G +
Sbjct: 960 LFYFECFTGFSGQSIYNDSYLLLFNVVLTSLPVISLGVFEQDVPSDVCLQFPALYQQGPK 1019
Query: 990 NILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVV 1049
N+ F W RILGW NGV + +IF + Q+FR G+ + +GT M+TC++W V
Sbjct: 1020 NLFFDWYRILGWMGNGVYASIVIFTLNLGIFHVQSFRSDGQTADMNAMGTAMFTCIIWAV 1079
Query: 1050 NCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWL 1109
N Q+AL++++FT+IQH+ IWG I WY+FL YG + +S + + +E APAP FWL
Sbjct: 1080 NVQIALTMSHFTWIQHVMIWGSIGAWYVFLALYGMLPVKLSGNIFHMLVEILAPAPIFWL 1139
Query: 1110 ITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQ---WFRSDGQTDDPEFCQMVRQRSLRPT 1166
+LLV+ ++ LPY + + Q PL H +IQ FR D +D + + ++ T
Sbjct: 1140 TSLLVIAATTLPYLFHISYQRSVNPLDHHIIQEIKHFRID--VEDERMWKREKSKAREKT 1197
Query: 1167 TVGYTARFEASSRDLKAKLE 1186
+G+TAR +A R L+ +L+
Sbjct: 1198 KIGFTARVDAKIRQLRGRLQ 1217
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1023 bits (2644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/1115 (47%), Positives = 731/1115 (65%), Gaps = 33/1115 (2%)
Query: 38 RVVHCNDPESFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP 97
R V+CND ES + + + GN + TTKY + TF PK LFEQFRR+AN+YFL + LS TP
Sbjct: 36 RTVYCNDRESNQP--VRFKGNSISTTKYNVFTFLPKGLFEQFRRIANIYFLGISCLSMTP 93
Query: 98 LSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDL 157
+SP S ++NV PL +V+ ++ KE EDW+R + D+ +NN V++ + + WR L
Sbjct: 94 ISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSINNSTVEI-LQDQQWVSIPWRKL 152
Query: 158 KVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSN 217
+VGD+VK++KD FFPAD++ +SS+ + ICYVET NLDGETNLK+++AL+ T +
Sbjct: 153 QVGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDGETNLKIRKALERTWDYLVPEK 212
Query: 218 FQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGR 277
FK I+CE PN +LYTF G+L +++Q PL+P QLLLR LRNT+ I GAV+FTG
Sbjct: 213 AYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLLLRGCSLRNTEYIVGAVVFTGH 272
Query: 278 DTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIAT-REDLQDGKMKR 336
+TKV N+ PSKRS +E+++DK+I +F +LV M IG+I I T RED G
Sbjct: 273 ETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIGCSIVTDREDKYLG---- 328
Query: 337 WYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSI-FINQDL 395
L D ++ + + F T + L+ +IPISLYVSIE++K +QS FIN+DL
Sbjct: 329 --LHNSD----WEYRNGLMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQFINRDL 382
Query: 396 HMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEV 455
+MY+ ET+ PA ARTSNLNEELGQV+ I SDKTGTLT N MEF KCSI G SYG GVTE+
Sbjct: 383 NMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEI 442
Query: 456 ERAMARRKGSPLEEEVTEEQEDKASI--KGFNFEDERIMNGSWVNEPHADVIQKFLRLLA 513
E+ +A+R G +V EEQ +I KGFNF+D R+M G+W NEP+ D+ ++ R LA
Sbjct: 443 EKGIAQRHGL----KVQEEQRSTGAIREKGFNFDDPRLMRGAWRNEPNPDLCKELFRCLA 498
Query: 514 ICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKV 573
ICHT LPE DE KI Y+A SPDEAA V AA+ GF FY RT T + V E K+
Sbjct: 499 ICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTMVYVRESHVEKMGKI 558
Query: 574 ER-SYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEH 632
+ +Y +LNVLEF+S+RKR SV+ R +G L+L KGAD+V+FERLA + + T+EH
Sbjct: 559 QDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERLANGMDDVRKVTREH 618
Query: 633 INEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILL 692
+ + +GLRTL LAY++L+ + Y +NE+F +AK+++ DRE+ +E+AE IEK+LIL+
Sbjct: 619 LEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALR-DREKKLDEVAELIEKDLILI 677
Query: 693 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE 752
G+TA+EDKLQ GVP CI+ L++AGIK+WVLTGDKMETAINI +AC+L+ M+Q +ISSE
Sbjct: 678 GSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFVISSE 737
Query: 753 TPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESL----GP-LALIIDGKSLT 807
T + E+ D+ A +K V +L K+ L+ + SL GP L+L+IDGK L
Sbjct: 738 TDAIREAEERGDQVEIARVIKEEVKREL---KKSLEEAQHSLHTVAGPKLSLVIDGKCLM 794
Query: 808 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 867
YAL+ ++ + L L++ C SV+CCR SP QKA VT LV+ TL+IGDGANDV M+Q
Sbjct: 795 YALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDGANDVSMIQ 854
Query: 868 EADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFG 927
A +G+GISG+EGMQAVM+SD AIAQFRFL LLLVHG W Y RI ++ YFFYKN+ F
Sbjct: 855 AAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVMYFFYKNLTFT 914
Query: 928 FTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEG 987
T F+F FSGQ Y+DWF SL+NV FT+LPVI LG+F++DVSA ++P LY+EG
Sbjct: 915 LTQFWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLSKRYPELYREG 974
Query: 988 VQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVW 1047
++N F W + WA + V + + + F + A G+V GL + T ++TC+V
Sbjct: 975 IRNSFFKWRVVAVWATSAVYQSLVCYLF-VTTSSFGAVNSSGKVFGLWDVSTMVFTCLVI 1033
Query: 1048 VVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAY-GAMDPYISTTAYKVFIEACAPAPS 1106
VN ++ L T ++ + G I W +F Y G M P+ I
Sbjct: 1034 AVNVRILLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPHDRNENVYFVIYVLMSTFY 1093
Query: 1107 FWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQ 1141
F+ LLV + SLL F + ++ FFP +Q++Q
Sbjct: 1094 FYFTLLLVPIVSLLGDFIFQGVERWFFPYDYQIVQ 1128
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1189 | ||||||
| 224121336 | 1183 | aminophospholipid ATPase [Populus tricho | 0.988 | 0.993 | 0.835 | 0.0 | |
| 255541872 | 1187 | Phospholipid-transporting ATPase, putati | 0.991 | 0.993 | 0.825 | 0.0 | |
| 356567694 | 1189 | PREDICTED: putative phospholipid-transpo | 0.989 | 0.989 | 0.823 | 0.0 | |
| 225455798 | 1192 | PREDICTED: putative phospholipid-transpo | 0.996 | 0.994 | 0.811 | 0.0 | |
| 356513878 | 1205 | PREDICTED: putative phospholipid-transpo | 0.991 | 0.978 | 0.798 | 0.0 | |
| 356516900 | 1190 | PREDICTED: putative phospholipid-transpo | 0.989 | 0.989 | 0.821 | 0.0 | |
| 449439369 | 1196 | PREDICTED: putative phospholipid-transpo | 0.989 | 0.983 | 0.781 | 0.0 | |
| 449486875 | 1196 | PREDICTED: LOW QUALITY PROTEIN: putative | 0.989 | 0.983 | 0.781 | 0.0 | |
| 449439677 | 1196 | PREDICTED: putative phospholipid-transpo | 0.989 | 0.983 | 0.778 | 0.0 | |
| 356563129 | 1217 | PREDICTED: putative phospholipid-transpo | 0.978 | 0.956 | 0.792 | 0.0 |
| >gi|224121336|ref|XP_002318557.1| aminophospholipid ATPase [Populus trichocarpa] gi|222859230|gb|EEE96777.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 2102 bits (5447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 987/1182 (83%), Positives = 1086/1182 (91%), Gaps = 7/1182 (0%)
Query: 5 RRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVRTTK 64
RRKK FSRIHAF CG+ SF+ +HSLIGGPGFSR+V+CN+PE FEA + NY+ NYVRTTK
Sbjct: 1 RRKKQRFSRIHAFPCGRASFRSEHSLIGGPGFSRIVYCNEPECFEAGLQNYASNYVRTTK 60
Query: 65 YTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLE 124
YTLATF PK+LFEQFRRVAN YFL+CAILSFTPLSPYSA+SNV+PLVVVIGATMGKEV+E
Sbjct: 61 YTLATFLPKSLFEQFRRVANFYFLLCAILSFTPLSPYSAISNVVPLVVVIGATMGKEVIE 120
Query: 125 DWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEE 184
DWRRKKQDIE+NNRKVKVH GEG FD+ KW DLKVGD+V+VEKDE+FPADLILLSSSY+E
Sbjct: 121 DWRRKKQDIEMNNRKVKVHYGEGVFDHAKWMDLKVGDIVRVEKDEYFPADLILLSSSYDE 180
Query: 185 AICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELE 244
AICYVETTNLDGETNLKLKQA D TSN+HEDS FQ+FKAIIRCEDPNANLY+F+GSL+L
Sbjct: 181 AICYVETTNLDGETNLKLKQAPDVTSNLHEDSGFQDFKAIIRCEDPNANLYSFIGSLDLG 240
Query: 245 EQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIY 304
E Q+ L PQQLLLRDSKLRNTD IYG VIFTG DTKV QNST PPSKRSK+E+RMDK+IY
Sbjct: 241 EDQHALMPQQLLLRDSKLRNTDYIYGVVIFTGHDTKVMQNSTAPPSKRSKIEKRMDKVIY 300
Query: 305 FLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTA 364
LF +LVL+SFIGSIFFGI+T+EDL+DG+MKRWYLRPD TT YYDP RA AA+LHF TA
Sbjct: 301 LLFFLLVLISFIGSIFFGISTKEDLEDGRMKRWYLRPDKTTIYYDPHRAPAAAILHFFTA 360
Query: 365 LMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTIL 424
LMLYGYLIPISLYVSIEIVK+LQSIFIN+DLHMY+EETDKPARARTSNLNEELGQVDTIL
Sbjct: 361 LMLYGYLIPISLYVSIEIVKVLQSIFINRDLHMYHEETDKPARARTSNLNEELGQVDTIL 420
Query: 425 SDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEE-------VTEEQED 477
SDKTGTLTCNSMEFIKCS+AGTSYGRGVTEVE+ MARRKGSPL +E V E
Sbjct: 421 SDKTGTLTCNSMEFIKCSVAGTSYGRGVTEVEKDMARRKGSPLPQEETEEEDIVEGVAEG 480
Query: 478 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537
K S+KGFNF DERI NG WVNEPHADV+QKFLRLLAICHTA+PE+DEE G+ISYEAESPD
Sbjct: 481 KPSVKGFNFVDERITNGHWVNEPHADVVQKFLRLLAICHTAIPEIDEETGRISYEAESPD 540
Query: 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 597
EAAFVIAARELGF+FYERTQTSI +HELD V+GTKVERSY LLN++EF+SSRKRMSVIVR
Sbjct: 541 EAAFVIAARELGFKFYERTQTSILLHELDLVSGTKVERSYQLLNIIEFNSSRKRMSVIVR 600
Query: 598 SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 657
+E+G LLLL KGADSVMFERLA +GREFEE T+EHI EYADAGLRTL+LAYRELDE+EY
Sbjct: 601 NEKGKLLLLCKGADSVMFERLARDGREFEEPTREHIGEYADAGLRTLVLAYRELDEEEYD 660
Query: 658 QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI 717
+FN EFTEAKNS+SADRE++ EE+AEKIE++LILLGATAVEDKLQNGVPECIDKLAQAGI
Sbjct: 661 EFNHEFTEAKNSLSADREDMIEEVAEKIERDLILLGATAVEDKLQNGVPECIDKLAQAGI 720
Query: 718 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777
K+WVLTGDKMETAINIGFACSLLRQGM+Q+IISS+TPE+K LEK EDK+A ALKASV+
Sbjct: 721 KIWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPENKALEKMEDKAAGVTALKASVV 780
Query: 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQ 837
HQ+ GK LL +S+E+ LALIIDGKSLTYA+EDDVK+LFLELAIGCASVICCRSSPKQ
Sbjct: 781 HQMNEGKALLTASSETSEALALIIDGKSLTYAIEDDVKNLFLELAIGCASVICCRSSPKQ 840
Query: 838 KALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL 897
KALVTRLVK+KT TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL
Sbjct: 841 KALVTRLVKSKTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL 900
Query: 898 ERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFF 957
ERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF+EAYASFSGQP YNDWFLSLYNVFF
Sbjct: 901 ERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEAYASFSGQPAYNDWFLSLYNVFF 960
Query: 958 TSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCI 1017
TSLPVIALGVFDQDVSARFCLKFPLLYQEGVQN+LFSW RI GWA NGV++A +IFFFCI
Sbjct: 961 TSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWIRIFGWAFNGVSSAVLIFFFCI 1020
Query: 1018 HAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYI 1077
AM+ QAFRKGGEV+GLEILG TMYTCVVWVVNCQMALS+ YFTYIQHLFIWGGI FWYI
Sbjct: 1021 RAMEHQAFRKGGEVVGLEILGATMYTCVVWVVNCQMALSINYFTYIQHLFIWGGIVFWYI 1080
Query: 1078 FLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHH 1137
FL+ YGAMDPY+STTAYKVF+EACAPAPS+WLITLLVL+SSL+PYF YSAIQMRFFPL+H
Sbjct: 1081 FLMVYGAMDPYLSTTAYKVFVEACAPAPSYWLITLLVLLSSLIPYFIYSAIQMRFFPLYH 1140
Query: 1138 QMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEASSR 1179
QMI W R+DGQT+DPE+C MVRQRSLRPTTVGYTAR+ A S+
Sbjct: 1141 QMIHWLRNDGQTEDPEYCNMVRQRSLRPTTVGYTARYVAKSK 1182
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541872|ref|XP_002512000.1| Phospholipid-transporting ATPase, putative [Ricinus communis] gi|223549180|gb|EEF50669.1| Phospholipid-transporting ATPase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 2056 bits (5328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 979/1186 (82%), Positives = 1066/1186 (89%), Gaps = 7/1186 (0%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
MAG RRKK HFSRIHAFSCGK SFKGDHSLIGGPGFSRVV+CNDPE FEA + +Y NY+
Sbjct: 1 MAGGRRKKQHFSRIHAFSCGKASFKGDHSLIGGPGFSRVVYCNDPECFEAGLHSYDSNYI 60
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
RTTKYTLATFFPK+LFEQFRRVAN YFLICAILSFTPLSPYSAVSNV+PL+VVIGATMGK
Sbjct: 61 RTTKYTLATFFPKSLFEQFRRVANFYFLICAILSFTPLSPYSAVSNVVPLLVVIGATMGK 120
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
EVLEDW+RK+QDIEVNNRKVKVH G+G F TKW DLKVGD+VKVEKDEFFPADLILLSS
Sbjct: 121 EVLEDWKRKRQDIEVNNRKVKVHSGDGDFLPTKWMDLKVGDIVKVEKDEFFPADLILLSS 180
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
SY+E ICYVET NLDGETNLKLKQALDATSN+ EDS+F +FK++IRCEDPNANLY+F+GS
Sbjct: 181 SYDEGICYVETMNLDGETNLKLKQALDATSNLQEDSSFHDFKSLIRCEDPNANLYSFIGS 240
Query: 241 LELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
EL EQQYPL+PQQLLLRDSKLRNT IYG VIFTG DTKV QNST PPSKRSK+ERR D
Sbjct: 241 FELGEQQYPLSPQQLLLRDSKLRNTYFIYGVVIFTGHDTKVMQNSTAPPSKRSKIERRTD 300
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
K+IY LF ILVLMSFIGSIFFGIATRED+++GKMKRWYLRPD TT YYDPKRA AA+LH
Sbjct: 301 KVIYLLFFILVLMSFIGSIFFGIATREDIENGKMKRWYLRPDHTTVYYDPKRAPAAAILH 360
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
FLTALMLY YLIPISLYVSIEIVK+LQSIFINQDLHMY+EE DKPARARTSNLNEELGQV
Sbjct: 361 FLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDLHMYFEEGDKPARARTSNLNEELGQV 420
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEE-------VTE 473
DTILSDKTGTLTCNSME IK S+AGTSYGRG+TEVE+AMARRKGSPL +E V E
Sbjct: 421 DTILSDKTGTLTCNSMELIKFSVAGTSYGRGITEVEKAMARRKGSPLPQEEIEGDTDVEE 480
Query: 474 EQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEA 533
+ E S KG+NF DERI +G WVNEP ADVIQKFLRLLAICHTA+PE DEE G+ISYEA
Sbjct: 481 QTEQTISTKGYNFVDERISDGHWVNEPCADVIQKFLRLLAICHTAIPESDEETGRISYEA 540
Query: 534 ESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMS 593
ESPDEAAFVIAARELGFEF+ERTQ SIS+ ELDPVTG KV R Y LLNV+EF+SSRKRMS
Sbjct: 541 ESPDEAAFVIAARELGFEFFERTQASISLLELDPVTGQKVTRYYQLLNVIEFTSSRKRMS 600
Query: 594 VIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDE 653
VIVR E G LLLL KGADS+MFERLA+NGREFE +TKEHI+EYADAGLRTL+LAYRELDE
Sbjct: 601 VIVRDEGGKLLLLCKGADSIMFERLAKNGREFEGKTKEHISEYADAGLRTLVLAYRELDE 660
Query: 654 KEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLA 713
+EY +F++EF EAK+ +SADREE EE+A +IE++LILLGATAVEDKLQ GVPECIDKLA
Sbjct: 661 EEYNEFSQEFNEAKSLLSADREETIEEVAARIERDLILLGATAVEDKLQQGVPECIDKLA 720
Query: 714 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALK 773
QAGIK+WVLTGDKMETAINIGFACSLLRQGM+QVIISSET E+KTL+K EDK AA A K
Sbjct: 721 QAGIKIWVLTGDKMETAINIGFACSLLRQGMKQVIISSETSENKTLQKMEDKDAADVASK 780
Query: 774 ASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS 833
ASVL Q+ GK LL +S+ESL LALIIDG SL YAL+DDVKD FLELAIGCASVICCRS
Sbjct: 781 ASVLRQINEGKALLGASSESLEALALIIDGNSLAYALQDDVKDEFLELAIGCASVICCRS 840
Query: 834 SPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893
SPKQKALVTRLVKTKT STTLAIGDGANDVGMLQEADIGVGISGVEGMQA+MSSD AIAQ
Sbjct: 841 SPKQKALVTRLVKTKTGSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAIMSSDFAIAQ 900
Query: 894 FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLY 953
FR+LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF+EAYASFSGQ YNDWFLSLY
Sbjct: 901 FRYLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEAYASFSGQAAYNDWFLSLY 960
Query: 954 NVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIF 1013
NVFFTSLPVIALGVFDQDVSAR+CLKFPLLYQEGVQN+LFSW +I+GW NG+ +A +IF
Sbjct: 961 NVFFTSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWQQIIGWVFNGILSATLIF 1020
Query: 1014 FFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGIT 1073
FFCI AM+ QAF KGG+V LEILG TMYTC+V VVNCQMALS+ YFTYIQHLFIWGGI
Sbjct: 1021 FFCISAMENQAFYKGGKVADLEILGATMYTCIVCVVNCQMALSINYFTYIQHLFIWGGII 1080
Query: 1074 FWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFF 1133
FWY+FLLAYGAMDPYISTTAYKVFIEACAPAPS+WLIT VL+SSLLPYF YSAIQMRFF
Sbjct: 1081 FWYLFLLAYGAMDPYISTTAYKVFIEACAPAPSYWLITFFVLISSLLPYFAYSAIQMRFF 1140
Query: 1134 PLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEASSR 1179
PL+HQMI W R+DGQT+DPE+C ++RQRSLR TTVGYTARF R
Sbjct: 1141 PLYHQMILWIRNDGQTEDPEYCNVIRQRSLRHTTVGYTARFSKRER 1186
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567694|ref|XP_003552052.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2045 bits (5298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 970/1178 (82%), Positives = 1077/1178 (91%), Gaps = 1/1178 (0%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
M GNRR++HHFSRIHAFSCGK SFKG+HSLIGGPGFSR+V+CN+ E E S+++Y NYV
Sbjct: 1 MGGNRRRRHHFSRIHAFSCGKASFKGEHSLIGGPGFSRIVYCNEAERGEGSLVSYGDNYV 60
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
TTKYT+ATF PK+LFEQFRRVAN YFLICAILSF P+SPYSAVSNV+PLVVV+ ATMGK
Sbjct: 61 STTKYTVATFLPKSLFEQFRRVANFYFLICAILSFFPVSPYSAVSNVVPLVVVVAATMGK 120
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
E +EDW+RKKQDI++NNRKVKVH GEG F Y+KW+DLKVGD+VKVEKDEFFPADLILLSS
Sbjct: 121 EAVEDWKRKKQDIDMNNRKVKVHRGEGIFGYSKWKDLKVGDIVKVEKDEFFPADLILLSS 180
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
S ++AICYVET NLDGETNLK+KQ+L+ TS + EDS+FQNFKAII+CEDPNANLY+FVGS
Sbjct: 181 SNDDAICYVETMNLDGETNLKVKQSLEETSKLQEDSSFQNFKAIIKCEDPNANLYSFVGS 240
Query: 241 LELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
LELE+Q YPL+PQ LLLRDSKLRNT+ IYG VIFTG DTKV QNST PPSKRS VE+RMD
Sbjct: 241 LELEDQLYPLSPQHLLLRDSKLRNTEFIYGVVIFTGHDTKVMQNSTEPPSKRSTVEKRMD 300
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
KIIYFLF +L+L+SFIGS+FFGIATREDL++G MKRWYLRPDDTT Y+DPK+A VAA+LH
Sbjct: 301 KIIYFLFLVLLLISFIGSVFFGIATREDLENGVMKRWYLRPDDTTIYFDPKKAPVAAMLH 360
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
FLTALMLY YLIPISLYVSIE+VK+LQSIFINQDLHMYYEETD+PA ARTSNLNEELGQV
Sbjct: 361 FLTALMLYSYLIPISLYVSIEVVKVLQSIFINQDLHMYYEETDRPAHARTSNLNEELGQV 420
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE-DKA 479
DTILSDKTGTLTCNSMEFIKCSIAG +YG+GVTEVERA+ARRKG P ++E+TE+ K+
Sbjct: 421 DTILSDKTGTLTCNSMEFIKCSIAGIAYGQGVTEVERALARRKGVPTDQELTEDGNVPKS 480
Query: 480 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEA 539
SIKGFNF DERIMNG+W+NEPHA+VIQ FLRLLA+CHTA+PEVD+E GK+SYEAESPDEA
Sbjct: 481 SIKGFNFMDERIMNGNWINEPHANVIQNFLRLLAVCHTAIPEVDDEIGKVSYEAESPDEA 540
Query: 540 AFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE 599
AFV+AARELGFEFYERTQT+IS+HE +P +G ERSY LLN+LEFSS+RKRMSVIVR E
Sbjct: 541 AFVVAARELGFEFYERTQTNISLHEFNPRSGKTTERSYKLLNILEFSSTRKRMSVIVRDE 600
Query: 600 EGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQF 659
EG LLL SKGADSVMFERLA NGREFEE+TK+HI EYADAGLRTLILAYRELDE+EY F
Sbjct: 601 EGKLLLFSKGADSVMFERLARNGREFEEKTKQHIEEYADAGLRTLILAYRELDEEEYNLF 660
Query: 660 NEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKL 719
NEEF EAKN VSADRE++ EEI+EKIEK+LILLG TAVEDKLQNGVPECIDKLAQAGIKL
Sbjct: 661 NEEFMEAKNLVSADREQIVEEISEKIEKDLILLGVTAVEDKLQNGVPECIDKLAQAGIKL 720
Query: 720 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779
WVLTGDKMETAINIGFACSLLRQGM+Q+IISS+T E+K+LEK EDKSAAA A+KASV+HQ
Sbjct: 721 WVLTGDKMETAINIGFACSLLRQGMKQIIISSDTTETKSLEKMEDKSAAAVAIKASVIHQ 780
Query: 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKA 839
L +GKELL S+E+ LALIIDGKSLTYALEDDVKDLFLELA+GCASVICCRSSPKQKA
Sbjct: 781 LAKGKELLAESDENSEALALIIDGKSLTYALEDDVKDLFLELAVGCASVICCRSSPKQKA 840
Query: 840 LVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLER 899
LVTRLVK KT STTLAIGDGANDVGMLQEADIG+GISGVEGMQAVMSSDIAIAQFRFLER
Sbjct: 841 LVTRLVKIKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLER 900
Query: 900 LLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTS 959
LLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF+E YASFSGQ YNDW+LSLYNVFFTS
Sbjct: 901 LLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEIYASFSGQAAYNDWYLSLYNVFFTS 960
Query: 960 LPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHA 1019
LPVIALGVFDQDVSAR CLKFPLLYQEGVQN+LFSW RILGWA NGV +A IIFFFCI+A
Sbjct: 961 LPVIALGVFDQDVSARLCLKFPLLYQEGVQNVLFSWKRILGWAFNGVLSATIIFFFCINA 1020
Query: 1020 MKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFL 1079
M+ QAFRK GEV LE+LG TMYTCVVWVVN QMALS++YFTYIQHLFIWGGI FWYIFL
Sbjct: 1021 MENQAFRKAGEVADLEVLGATMYTCVVWVVNSQMALSISYFTYIQHLFIWGGILFWYIFL 1080
Query: 1080 LAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQM 1139
L YG MDP +STTAYKV IEACAPAPS+WLITLLVL++SLLPYF Y++IQMRFFP HQM
Sbjct: 1081 LVYGTMDPSLSTTAYKVLIEACAPAPSYWLITLLVLVASLLPYFAYASIQMRFFPTFHQM 1140
Query: 1140 IQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEAS 1177
IQW R+DGQT DPE+ +VRQRS+R TTVG+TARFEAS
Sbjct: 1141 IQWIRNDGQTTDPEYVNIVRQRSIRHTTVGFTARFEAS 1178
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225455798|ref|XP_002271424.1| PREDICTED: putative phospholipid-transporting ATPase 9-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2031 bits (5262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 967/1192 (81%), Positives = 1072/1192 (89%), Gaps = 7/1192 (0%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
MAG RRK+ HF RIHAFSCG+ SF G+HSLIGGPGFSR+V CNDPE FEA L Y GNYV
Sbjct: 1 MAGGRRKRQHFGRIHAFSCGRASFNGEHSLIGGPGFSRIVFCNDPECFEAGQLKYGGNYV 60
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
RTTKYTLAT+FPKALFEQFRRVAN+YFLICAILSFT LSPYSA S V PLVVV+G TMGK
Sbjct: 61 RTTKYTLATYFPKALFEQFRRVANIYFLICAILSFTALSPYSAFSTVFPLVVVVGVTMGK 120
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
E +EDWRRK+QDIE+NNRKVK H G+G FDY KW DLKVGDVVKVEKDEFFPADLILLSS
Sbjct: 121 EAVEDWRRKRQDIEMNNRKVKYHRGDGVFDYAKWMDLKVGDVVKVEKDEFFPADLILLSS 180
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
SY++AICYVETTNLDGETNLKLKQALD T+N+ +DS F+NF+AII+CEDPNANLY+FVG+
Sbjct: 181 SYDDAICYVETTNLDGETNLKLKQALDVTANLLDDSRFENFRAIIKCEDPNANLYSFVGN 240
Query: 241 LELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
L+LEEQQ+PLTPQQLLLRDSKLRNTD IYG VIFTG DTKV QNST PPSKRSK+ERRMD
Sbjct: 241 LQLEEQQFPLTPQQLLLRDSKLRNTDYIYGVVIFTGHDTKVIQNSTAPPSKRSKIERRMD 300
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
K++Y LF LV +SFIGS+FFGI T EDL++G M RWYLRPDDTT YYDPKRA VAA+LH
Sbjct: 301 KLVYLLFSALVFLSFIGSVFFGITTSEDLENGVMTRWYLRPDDTTIYYDPKRAPVAAILH 360
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
FLTALMLYGYLIPISLYVSIEIVK+LQS+FINQD HMYYEE DKPARARTSNLNEELGQV
Sbjct: 361 FLTALMLYGYLIPISLYVSIEIVKVLQSVFINQDPHMYYEEGDKPARARTSNLNEELGQV 420
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQ----- 475
DTILSDKTGTLTCNSMEFIKCSIAGT+YGRG+TEVERA AR K +PL +EV E++
Sbjct: 421 DTILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVERAQARGKETPLAQEVVEDKDNVEE 480
Query: 476 --EDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEA 533
E K SIKG+NF DERI NG+WVNEP ADVIQ FLRLLA+CHTA+PEVD+E GKISYEA
Sbjct: 481 ITETKPSIKGYNFIDERITNGNWVNEPRADVIQNFLRLLAVCHTAIPEVDDETGKISYEA 540
Query: 534 ESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMS 593
ESPDEAAFVI ARELGFEFYERTQTSIS+HELDP++G KV R+Y L+N++EFSS+RKRMS
Sbjct: 541 ESPDEAAFVIGARELGFEFYERTQTSISLHELDPMSGRKVARTYKLMNIIEFSSARKRMS 600
Query: 594 VIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDE 653
VIVR+EEG LLLLSKGADSVMFERLA++GREFE QT+ HINEYADAGLRTL+LAYRELD+
Sbjct: 601 VIVRNEEGRLLLLSKGADSVMFERLAQDGREFEVQTRLHINEYADAGLRTLVLAYRELDD 660
Query: 654 KEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLA 713
+EY +FNEEF++AKN VSADREE+ EE+AE+IEK+LILLGATAVEDKLQNGVPECIDKLA
Sbjct: 661 EEYNEFNEEFSQAKNLVSADREEIIEEVAERIEKDLILLGATAVEDKLQNGVPECIDKLA 720
Query: 714 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALK 773
QAGIKLWVLTGDKMETAINIGFACSLLRQGM+Q+II+SETP K LEK+ DKSA A K
Sbjct: 721 QAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIINSETPGIKALEKAGDKSAVDEAAK 780
Query: 774 ASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS 833
A+V+ Q+ GK LL+ ++E LALIIDGKSL YALEDDVKD+FLELAIGCASVICCRS
Sbjct: 781 ANVIQQISEGKALLNIASEDSEALALIIDGKSLIYALEDDVKDMFLELAIGCASVICCRS 840
Query: 834 SPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893
SPKQKALVTRLVK KT STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ
Sbjct: 841 SPKQKALVTRLVKVKTGSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 900
Query: 894 FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLY 953
FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQ YNDW+LSLY
Sbjct: 901 FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQAAYNDWYLSLY 960
Query: 954 NVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIF 1013
NVFFTSLPVIA+GVFDQDV+ARFCLKFPLLYQEGVQN+LFSWTRILGWA NGV ++ +IF
Sbjct: 961 NVFFTSLPVIAMGVFDQDVAARFCLKFPLLYQEGVQNVLFSWTRILGWAFNGVLSSTLIF 1020
Query: 1014 FFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGIT 1073
FFC AM+ QAFRKGGEV+G+EI G MYTCVVWVVNCQMALS+ YFT IQH+FIWG I
Sbjct: 1021 FFCACAMEHQAFRKGGEVVGMEIFGAVMYTCVVWVVNCQMALSINYFTLIQHVFIWGSIV 1080
Query: 1074 FWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFF 1133
FWYIFLL YGAMDP ISTTAY+VFIEACAPA SFWL+TL V +++LLPYF+Y+AIQMRFF
Sbjct: 1081 FWYIFLLVYGAMDPNISTTAYQVFIEACAPALSFWLVTLFVTVATLLPYFSYAAIQMRFF 1140
Query: 1134 PLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEASSRDLKAKL 1185
P++HQMIQW R+DG ++DPE+CQMVRQRSLR TTVGYTARF S +L ++
Sbjct: 1141 PMYHQMIQWIRNDGHSEDPEYCQMVRQRSLRSTTVGYTARFSRSKLELPEQI 1192
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513878|ref|XP_003525635.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2010 bits (5208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 941/1179 (79%), Positives = 1070/1179 (90%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
MAG RR++HHFSRIHAF+CG+ S K +HSLIGGPGFSR V+CNDPE AS+LNY NYV
Sbjct: 1 MAGGRRRRHHFSRIHAFTCGRASMKEEHSLIGGPGFSRKVYCNDPEHATASLLNYGDNYV 60
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
RTTKYTLATF PK+LFEQFRRVAN YFL+CA+LSF P+SPYS +SNV+PL+VV+ ATM K
Sbjct: 61 RTTKYTLATFLPKSLFEQFRRVANFYFLVCAVLSFFPVSPYSGISNVVPLLVVVAATMVK 120
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
E +ED+ RKKQDIE+NNRKVK+H G G FDY+KWRDLKVGDVV+VEKDEFFPADLILL+S
Sbjct: 121 EFIEDFSRKKQDIEMNNRKVKLHRGGGVFDYSKWRDLKVGDVVRVEKDEFFPADLILLAS 180
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
+Y++AICYVET NLDGETNLKLKQAL+ATS +HEDSNFQNF+A+I+CEDPNANLYTFVGS
Sbjct: 181 NYDDAICYVETMNLDGETNLKLKQALEATSKLHEDSNFQNFRAVIKCEDPNANLYTFVGS 240
Query: 241 LELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
+ELE+QQYPL PQQLLLRDSKLRNTD +YG VIFTG DTKV QN+T PPSKRSK+E+RMD
Sbjct: 241 MELEDQQYPLAPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVMQNATDPPSKRSKIEKRMD 300
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
KIIY LF +L+L+SFIGSIFFGIAT +DL++G+MKRWYLRPDDT YYDP AA+LH
Sbjct: 301 KIIYCLFFVLILISFIGSIFFGIATNDDLENGRMKRWYLRPDDTEIYYDPNEPVAAAILH 360
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
F TALMLYGYLIPISLYVSIEIVK+LQS+FINQD+HMYYEETDKPA ARTSNLNEELGQV
Sbjct: 361 FFTALMLYGYLIPISLYVSIEIVKVLQSVFINQDVHMYYEETDKPAHARTSNLNEELGQV 420
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 480
DTILSDKTGTLTCNSMEFIKCSIAG +YG+ VTEVERA++ R S + + + E K+S
Sbjct: 421 DTILSDKTGTLTCNSMEFIKCSIAGVAYGQRVTEVERALSGRHESHPGQVLEKISESKSS 480
Query: 481 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAA 540
IKGFNF DER+MNG+W+ EP+A+VIQ FL+LLA+CHTA+PEVDEE GK+SYEAESPDEAA
Sbjct: 481 IKGFNFMDERVMNGNWIKEPNANVIQNFLQLLAVCHTAIPEVDEETGKVSYEAESPDEAA 540
Query: 541 FVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE 600
FVIAARELGFEFYERT T+IS+HELDP++G K+ RSY LLN+LEF+S+RKRMSVIVR E
Sbjct: 541 FVIAARELGFEFYERTHTTISLHELDPISGQKINRSYKLLNILEFTSARKRMSVIVRDAE 600
Query: 601 GTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFN 660
G LLLLSKGADSVMFER+A+NGR+FEE+TK+HI+EYAD+GLRTLILAYREL+E+EY +F+
Sbjct: 601 GKLLLLSKGADSVMFERIAKNGRDFEEKTKQHISEYADSGLRTLILAYRELNEEEYNKFS 660
Query: 661 EEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 720
+EFTEAKN VS D+E++ E I + IEK+LILLGATAVEDKLQ+GVPECIDKLAQAGIKLW
Sbjct: 661 KEFTEAKNLVSEDQEQIVEGIVQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLW 720
Query: 721 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 780
VLTGDKMETAINIGFACSLLRQGM+Q+IISS+TPE+K+LEK EDKSAA AA+K+SVL QL
Sbjct: 721 VLTGDKMETAINIGFACSLLRQGMKQIIISSDTPETKSLEKMEDKSAAEAAIKSSVLRQL 780
Query: 781 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKAL 840
K LL +S+E+ LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKAL
Sbjct: 781 REAKALLSTSDENYEALALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKAL 840
Query: 841 VTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERL 900
VTRLVK +T STTLAIGDGANDVGMLQEADIG+GISGVEGMQAVMSSDIAIAQFRFLERL
Sbjct: 841 VTRLVKMRTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERL 900
Query: 901 LLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSL 960
LLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFE YASFSGQ YNDWF+SLYNVFFTSL
Sbjct: 901 LLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEIYASFSGQAAYNDWFMSLYNVFFTSL 960
Query: 961 PVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAM 1020
PVIALGVFDQDVS++ CLKFPLLYQEGVQNILFSW RI+GWALNGV +AI+FFFCI +M
Sbjct: 961 PVIALGVFDQDVSSKLCLKFPLLYQEGVQNILFSWKRIIGWALNGVVTSAIVFFFCIRSM 1020
Query: 1021 KQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLL 1080
+ QAFRKGGEV+GLE+LG TMYTCVVWVVNCQMALS++YFTYIQH+FIWG I FWYIFLL
Sbjct: 1021 EYQAFRKGGEVMGLEVLGATMYTCVVWVVNCQMALSISYFTYIQHIFIWGSILFWYIFLL 1080
Query: 1081 AYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMI 1140
AYGA+DP STTAYKVFIEA APAP FW+ITLL+L++SLLPYF Y++IQMRFFP++HQMI
Sbjct: 1081 AYGAIDPSFSTTAYKVFIEALAPAPFFWIITLLILIASLLPYFIYASIQMRFFPMYHQMI 1140
Query: 1141 QWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEASSR 1179
QW R+D QT DPE+C +VRQRS+R TTVG+TAR EAS R
Sbjct: 1141 QWMRNDRQTSDPEYCNVVRQRSIRHTTVGFTARLEASKR 1179
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516900|ref|XP_003527130.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2003 bits (5188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 968/1179 (82%), Positives = 1072/1179 (90%), Gaps = 2/1179 (0%)
Query: 1 MAGN-RRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNY 59
M GN RR++ HFSRIHAFSCGK SFKG+HSLIGGPGFSR+V+CN+ E E S+++Y NY
Sbjct: 1 MEGNGRRRRRHFSRIHAFSCGKASFKGEHSLIGGPGFSRIVYCNEAERGEGSLVSYGDNY 60
Query: 60 VRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMG 119
V TTKYT+ATF PK+LFEQFRRVAN YFLICAILSF P+SPYSAVSNV+PLVVV+ ATMG
Sbjct: 61 VSTTKYTVATFLPKSLFEQFRRVANFYFLICAILSFFPVSPYSAVSNVVPLVVVVAATMG 120
Query: 120 KEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLS 179
KE +EDW+RKKQDI++NNRKVKVH G+G FDY+KW+DLKVGD+VKVEKDEFFPADLILLS
Sbjct: 121 KEAVEDWKRKKQDIDMNNRKVKVHRGDGVFDYSKWKDLKVGDIVKVEKDEFFPADLILLS 180
Query: 180 SSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVG 239
SSY++AICYVET NLDGETNLK+KQ+L+ TS + EDS+FQNFKAII+CEDPNANLY+FVG
Sbjct: 181 SSYDDAICYVETMNLDGETNLKVKQSLEETSKLQEDSSFQNFKAIIKCEDPNANLYSFVG 240
Query: 240 SLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRM 299
SLELE+Q YPL+P LLLRDSKLRNT+ IYG VIFTG DTKV QNST PPSKRS VE+RM
Sbjct: 241 SLELEDQLYPLSPLHLLLRDSKLRNTEFIYGVVIFTGHDTKVMQNSTEPPSKRSTVEKRM 300
Query: 300 DKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVL 359
DKIIYFLF +L L+SFIGSIFFGIATR+DL++G MKRWYLRPDDTT Y+DPK+A VAA+L
Sbjct: 301 DKIIYFLFLVLFLISFIGSIFFGIATRKDLENGVMKRWYLRPDDTTIYFDPKKAPVAAML 360
Query: 360 HFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQ 419
HFLTALMLY YLIPISLYVSIE+VK+LQSIFINQDLHMYYEE D+PA ARTSNLNEELGQ
Sbjct: 361 HFLTALMLYSYLIPISLYVSIEVVKVLQSIFINQDLHMYYEEADRPAHARTSNLNEELGQ 420
Query: 420 VDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE-DK 478
VDTILSDKTGTLTCNSMEFIKCSIAG +YG+GVTEVERA+ARR+G PL +E+TE+ K
Sbjct: 421 VDTILSDKTGTLTCNSMEFIKCSIAGIAYGQGVTEVERALARREGVPLSQELTEDGNVPK 480
Query: 479 ASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDE 538
+SIKGFNF DERIM G+W+NEPHADVIQ FLRLLA+CHTA+PEVDEE GK+SYEAESPDE
Sbjct: 481 SSIKGFNFMDERIMKGNWINEPHADVIQNFLRLLAVCHTAIPEVDEEIGKVSYEAESPDE 540
Query: 539 AAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRS 598
AAFV+AARELGFEFYERTQT+IS+HE +P +G ERSY LLN+LEFSS+RKRMSVIVR
Sbjct: 541 AAFVVAARELGFEFYERTQTNISLHEFNPRSGQTTERSYKLLNILEFSSTRKRMSVIVRD 600
Query: 599 EEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQ 658
EEG LLL SKGADSVMFERLA NGREFEE+TK+HI+EYADAGLRTLILAYRELDE+EY
Sbjct: 601 EEGKLLLFSKGADSVMFERLARNGREFEEKTKQHIDEYADAGLRTLILAYRELDEEEYNL 660
Query: 659 FNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIK 718
FNEEF EAKN VSADRE++ EEI+EKIEK+LILLGATAVEDKLQNGVPECIDKLAQAGIK
Sbjct: 661 FNEEFMEAKNLVSADREQIVEEISEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIK 720
Query: 719 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778
LWVLTGDKMETAINIGFACSLLRQGM+Q+IISS+TPE+K+LEK EDKSAAAAA+K SV+H
Sbjct: 721 LWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPETKSLEKVEDKSAAAAAVKVSVIH 780
Query: 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK 838
QL GKELL S+E+ LALIIDGKSLTYALEDDVKDLFL LA GCASVICCRSSPKQK
Sbjct: 781 QLTNGKELLAESDENSEALALIIDGKSLTYALEDDVKDLFLTLAAGCASVICCRSSPKQK 840
Query: 839 ALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLE 898
ALVTRLVK KT STTLAIGDGANDVGMLQEADIG+GISGVEGMQAVMSSDIAIAQFRFLE
Sbjct: 841 ALVTRLVKVKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLE 900
Query: 899 RLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFT 958
RLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF+E YASFSGQ YNDW+LSLYNVFFT
Sbjct: 901 RLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEIYASFSGQAAYNDWYLSLYNVFFT 960
Query: 959 SLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIH 1018
SLPVIALGVFDQDVSAR C KFPLLYQEGVQN+LFSW RILGWA NGV +A IIFFFCI+
Sbjct: 961 SLPVIALGVFDQDVSARLCHKFPLLYQEGVQNVLFSWKRILGWAFNGVLSATIIFFFCIN 1020
Query: 1019 AMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIF 1078
M+ QAFRK GEV LE+LG TMYTCVVWVVN QMALS++YFTYIQHLFIWGGI FWYIF
Sbjct: 1021 GMENQAFRKAGEVADLEVLGATMYTCVVWVVNSQMALSISYFTYIQHLFIWGGILFWYIF 1080
Query: 1079 LLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQ 1138
LL YG MDP +STTAYKV IEACAPAPS+WLITLLVL++SLLPYF Y++IQMRFFP HQ
Sbjct: 1081 LLVYGTMDPSLSTTAYKVLIEACAPAPSYWLITLLVLVASLLPYFAYASIQMRFFPTFHQ 1140
Query: 1139 MIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEAS 1177
MIQW R+DGQT DPE+ +VRQRS+R TTVG+TARFEAS
Sbjct: 1141 MIQWIRNDGQTTDPEYVNIVRQRSIRHTTVGFTARFEAS 1179
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449439369|ref|XP_004137458.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1987 bits (5148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 924/1182 (78%), Positives = 1054/1182 (89%), Gaps = 6/1182 (0%)
Query: 2 AGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVR 61
+G +R+K HF RIHAF CG+ SFK +HSLIGGPGFSR+V+CNDP+SFEA++LNY GNYV+
Sbjct: 3 SGRKRRKQHFRRIHAFPCGRASFKDEHSLIGGPGFSRIVYCNDPDSFEANLLNYGGNYVK 62
Query: 62 TTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKE 121
T+KYT+A+FFPK+LFEQFRRVAN+YFL+CA+LSF+PLSPYS VSNVLPLVVVIG TMGKE
Sbjct: 63 TSKYTVASFFPKSLFEQFRRVANLYFLLCALLSFSPLSPYSPVSNVLPLVVVIGVTMGKE 122
Query: 122 VLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSS 181
LEDWRR KQD+E+NNRKVKVH +G F TKW DL+VG VV+VEKDEFFPADLILLSSS
Sbjct: 123 ALEDWRRTKQDMEMNNRKVKVHIEDGEFVETKWMDLRVGHVVRVEKDEFFPADLILLSSS 182
Query: 182 YEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSL 241
YEEAICYVET NLDGETNLKLK AL+A+SN+H+DS+FQNFKA I+CEDPNANLY+FVGS+
Sbjct: 183 YEEAICYVETMNLDGETNLKLKNALEASSNLHDDSSFQNFKATIKCEDPNANLYSFVGSM 242
Query: 242 ELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDK 301
LEEQQ+PL+PQQLLLRDSKLRNTD +YG VIFTG DTKV QNST PPSKRSK+E+RMDK
Sbjct: 243 LLEEQQHPLSPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVIQNSTDPPSKRSKIEKRMDK 302
Query: 302 IIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHF 361
I++FLFG+LVL+S +GSIFFG+ TR+DL++G+ RWYLRPDDTT YYDPK A AAVL F
Sbjct: 303 IVFFLFGVLVLLSVVGSIFFGVKTRDDLENGRATRWYLRPDDTTIYYDPKNAPAAAVLQF 362
Query: 362 LTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVD 421
LTALML+ YLIPISLYVSIEIVK+LQS+FINQDLHMY+EETDKPA ARTSNLNEELGQVD
Sbjct: 363 LTALMLFSYLIPISLYVSIEIVKVLQSVFINQDLHMYHEETDKPAHARTSNLNEELGQVD 422
Query: 422 TILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE----D 477
TILSDKTGTLTCNSMEFIKCS+ GT+YGRG+TEVERA+ARRK S L + + +
Sbjct: 423 TILSDKTGTLTCNSMEFIKCSVGGTAYGRGITEVERALARRKESTLPQNFGADNARLSGE 482
Query: 478 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537
K +KGFNF+DER+M+G+WV EP A+VIQKFL+LLAICHTALPE+DEE GKISYEAESPD
Sbjct: 483 KTFVKGFNFKDERMMDGNWVKEPRANVIQKFLQLLAICHTALPEIDEETGKISYEAESPD 542
Query: 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 597
EAAFVIAARE GFEFYER+QTSIS+ E DP + KVERSY LL+VLEF+S+RKRMSVI+R
Sbjct: 543 EAAFVIAAREFGFEFYERSQTSISLREFDPTSAKKVERSYQLLDVLEFNSTRKRMSVIIR 602
Query: 598 SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 657
+G LLLL KGADSVMFERLA+NG EFEEQTK HINEYADAGLRTL+LAYREL E+E+
Sbjct: 603 DSKGKLLLLCKGADSVMFERLAKNGNEFEEQTKVHINEYADAGLRTLVLAYRELKEEEFN 662
Query: 658 QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI 717
F++EF +AKN+VS R+++ +++ E IEK+LILLGATAVEDKLQNGVPECIDKLAQAGI
Sbjct: 663 AFHQEFIKAKNTVSTGRDDIIDQLTESIEKDLILLGATAVEDKLQNGVPECIDKLAQAGI 722
Query: 718 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSED--KSAAAAALKAS 775
K+WVLTGDKMETAINIGFACSLLRQGM+Q+IISSETPE K L+K ED KSAA A K S
Sbjct: 723 KIWVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEGKALDKVEDVHKSAAIKAFKTS 782
Query: 776 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 835
V+ Q+ K LL SS E+ LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP
Sbjct: 783 VIQQITDAKALLTSSTETPETLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 842
Query: 836 KQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895
KQKA VT++VK KT STTLA+GDGANDVGM+QEADIG+GISGVEGMQAVMSSDIAIAQFR
Sbjct: 843 KQKAQVTQMVKVKTGSTTLAVGDGANDVGMIQEADIGIGISGVEGMQAVMSSDIAIAQFR 902
Query: 896 FLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNV 955
+LERLLLVHGHWCYRRISSMICYFFYKNI FGFTLFFFE YASFSGQ VYNDWFLSLYNV
Sbjct: 903 YLERLLLVHGHWCYRRISSMICYFFYKNIVFGFTLFFFEMYASFSGQTVYNDWFLSLYNV 962
Query: 956 FFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFF 1015
FFTSLPVIALGVFDQDVS+R+CLKF LLYQEGVQN+LFSW RI GW NG+ ++ IIFFF
Sbjct: 963 FFTSLPVIALGVFDQDVSSRYCLKFSLLYQEGVQNVLFSWVRIFGWVFNGLLSSVIIFFF 1022
Query: 1016 CIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFW 1075
C+ AM QAFR GEV+GLEILG TMYTCVVWVVNCQMALS++YFTYIQHLFIWG I W
Sbjct: 1023 CVGAMDYQAFRNSGEVVGLEILGVTMYTCVVWVVNCQMALSISYFTYIQHLFIWGSIVLW 1082
Query: 1076 YIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPL 1135
Y+FL+AYGA++P ISTTA++VFIEACAPAPSFW++TLL L +SLLPYF + +IQMRFFP+
Sbjct: 1083 YLFLMAYGAINPTISTTAFQVFIEACAPAPSFWILTLLALGASLLPYFVFGSIQMRFFPM 1142
Query: 1136 HHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEAS 1177
+HQMIQW ++DGQ +DPE+CQ+VRQRSLR TTVGYTARFEAS
Sbjct: 1143 YHQMIQWIKADGQLNDPEYCQVVRQRSLRHTTVGYTARFEAS 1184
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449486875|ref|XP_004157428.1| PREDICTED: LOW QUALITY PROTEIN: putative phospholipid-transporting ATPase 9-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1985 bits (5142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 924/1182 (78%), Positives = 1054/1182 (89%), Gaps = 6/1182 (0%)
Query: 2 AGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVR 61
+G +R+K HF RIHAF CG+ SFK +HSLIGGPGFSR+V+CNDP+SFEA++LNY GNYV+
Sbjct: 3 SGRKRRKQHFRRIHAFPCGRASFKDEHSLIGGPGFSRIVYCNDPDSFEANLLNYGGNYVK 62
Query: 62 TTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKE 121
T+KYT+A+FFPK+LFEQFRRVAN+YFL CA+LSFTPLSPYS VSNVLPLVVVIG TMGKE
Sbjct: 63 TSKYTVASFFPKSLFEQFRRVANLYFLFCALLSFTPLSPYSPVSNVLPLVVVIGVTMGKE 122
Query: 122 VLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSS 181
LEDWRR KQD+E+NNRKVKVH G+G F TKW DL+VG VV+VEKDEFFPADLILLSSS
Sbjct: 123 ALEDWRRTKQDMEMNNRKVKVHIGDGEFVETKWMDLRVGHVVRVEKDEFFPADLILLSSS 182
Query: 182 YEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSL 241
YEEAICYVET NLDGETNLKLK AL+A+SN+H+DS+FQNFKA I+CEDPNANLY+FVGS+
Sbjct: 183 YEEAICYVETMNLDGETNLKLKNALEASSNLHDDSSFQNFKATIKCEDPNANLYSFVGSM 242
Query: 242 ELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDK 301
LEEQQ+PL+PQQLLLRDSKLRNTD +YG VIFTG DTKV QNST PPSKRSK+E+RMDK
Sbjct: 243 LLEEQQHPLSPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVIQNSTDPPSKRSKIEKRMDK 302
Query: 302 IIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHF 361
I++FLFG+LVL+S +GSIFFG+ TR+DL++G+ RWYLRPDDTT YYDPK A AAVL F
Sbjct: 303 IVFFLFGVLVLLSVVGSIFFGVKTRDDLENGRATRWYLRPDDTTIYYDPKNAPAAAVLQF 362
Query: 362 LTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVD 421
LTALML+ YLIPISLYVSIEIVK+LQS+FINQDLHMY+EETDKPA ARTSNLNEELGQVD
Sbjct: 363 LTALMLFSYLIPISLYVSIEIVKVLQSVFINQDLHMYHEETDKPAHARTSNLNEELGQVD 422
Query: 422 TILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE----D 477
TILSDKTGTLTCNSMEFIKCS+ GT+YGRG+TEVERA+ARRK S L + + +
Sbjct: 423 TILSDKTGTLTCNSMEFIKCSVGGTAYGRGITEVERALARRKESTLPQNFGADNARLSGE 482
Query: 478 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537
K +KGFNF+DER+M+G+WV EP A+VIQKFL+LLAICHTALPE+DEE GKISYEAESPD
Sbjct: 483 KXFVKGFNFKDERMMDGNWVKEPRANVIQKFLQLLAICHTALPEIDEETGKISYEAESPD 542
Query: 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 597
EAAFVIAARE GFEFYER+QTSIS+ E DP + KVERSY LL+VLEF+S+RKRMSVI+R
Sbjct: 543 EAAFVIAAREFGFEFYERSQTSISLREFDPTSAKKVERSYQLLDVLEFNSTRKRMSVIIR 602
Query: 598 SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 657
+ G LLLL KGADSVMFERLA+N EFEEQTK H+NEYADAGLRTL+LAYREL E+E+
Sbjct: 603 DQRGKLLLLCKGADSVMFERLAKNRCEFEEQTKVHVNEYADAGLRTLVLAYRELKEEEFN 662
Query: 658 QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI 717
F++EF +AKN+VS DR+++ +++ E +EK+LILLGATAVEDKLQNGVPECIDKLAQAGI
Sbjct: 663 SFHQEFIKAKNTVSTDRDDIIDQLTESVEKDLILLGATAVEDKLQNGVPECIDKLAQAGI 722
Query: 718 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSED--KSAAAAALKAS 775
K+WVLTGDKMETAINIGFACSLLRQGM+Q+IISSETPE K L+K ED KSAA A K S
Sbjct: 723 KIWVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEGKALDKVEDDHKSAAIKAFKTS 782
Query: 776 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 835
V Q+ K LL SS+E+ LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP
Sbjct: 783 VTQQITDAKALLTSSSETPETLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 842
Query: 836 KQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895
KQKA VT++VK KT STTLA+GDGANDVGM+QEADIG+GISGVEGMQAVMSSDIAIAQFR
Sbjct: 843 KQKAQVTQMVKVKTGSTTLAVGDGANDVGMIQEADIGIGISGVEGMQAVMSSDIAIAQFR 902
Query: 896 FLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNV 955
+LERLLLVHGHWCYRRISSMICYFFYKNI FGFTLFFFE YASFSGQ VYNDWFLSLYNV
Sbjct: 903 YLERLLLVHGHWCYRRISSMICYFFYKNIVFGFTLFFFEMYASFSGQTVYNDWFLSLYNV 962
Query: 956 FFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFF 1015
FFTSLPVIALGVFDQDVS+R+CLKF LLYQEGVQN+LFSW RI GW NG+ ++ IIFFF
Sbjct: 963 FFTSLPVIALGVFDQDVSSRYCLKFSLLYQEGVQNVLFSWVRIXGWVFNGLLSSVIIFFF 1022
Query: 1016 CIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFW 1075
C+ AM QAFR GEV+GLEILG TMYTCVVWVVNCQMALS++YFTYIQHLFIWG I W
Sbjct: 1023 CVGAMDYQAFRNSGEVVGLEILGVTMYTCVVWVVNCQMALSISYFTYIQHLFIWGSIVLW 1082
Query: 1076 YIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPL 1135
Y+FL+AYGA++P ISTTA++VFIEACAPAPSFW++TLL L +SLLPYF + +IQMRFFP+
Sbjct: 1083 YLFLMAYGAINPTISTTAFQVFIEACAPAPSFWILTLLALGASLLPYFVFGSIQMRFFPM 1142
Query: 1136 HHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEAS 1177
+HQMIQW ++DGQ +DPE+CQ+VRQRSLR TTVGYTARFEAS
Sbjct: 1143 YHQMIQWIKADGQLNDPEYCQVVRQRSLRHTTVGYTARFEAS 1184
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449439677|ref|XP_004137612.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1984 bits (5141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 920/1182 (77%), Positives = 1055/1182 (89%), Gaps = 6/1182 (0%)
Query: 2 AGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVR 61
+G +R+K HF RIHAF CG+ SFK +HSLIGGPGFSR+V+CNDP+SFEA++LNY GNYV+
Sbjct: 3 SGRKRRKQHFRRIHAFPCGRASFKDEHSLIGGPGFSRIVYCNDPDSFEANLLNYGGNYVK 62
Query: 62 TTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKE 121
T+KYT+A+FFPK+LFEQFRRVAN+YFL+CA+LSF+PLSPYS VSNVLPLVVVIG TMGKE
Sbjct: 63 TSKYTVASFFPKSLFEQFRRVANLYFLLCALLSFSPLSPYSPVSNVLPLVVVIGVTMGKE 122
Query: 122 VLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSS 181
LEDWRR KQD+E+NNRKVKVH G+G F TKW DL+VG VV+VEKDEFFPADLILLSSS
Sbjct: 123 ALEDWRRTKQDMEMNNRKVKVHIGDGEFVETKWMDLRVGHVVRVEKDEFFPADLILLSSS 182
Query: 182 YEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSL 241
YEEAICYVET NLDGETNLKLK AL+A+SN+H+DS+FQNFKA I+CEDPNANLY+FVGS+
Sbjct: 183 YEEAICYVETMNLDGETNLKLKNALEASSNLHDDSSFQNFKATIKCEDPNANLYSFVGSM 242
Query: 242 ELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDK 301
LEEQQ+PL+PQQLLLRDSKLRNTD +YG VIFTG DTKV QNST PPSKRSK+E+RMDK
Sbjct: 243 LLEEQQHPLSPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVIQNSTDPPSKRSKIEKRMDK 302
Query: 302 IIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHF 361
I++FLF +LVL+S +GSIFFG+ TR+DL++G+ RWYLRPDDTT YY+PK A AAVL F
Sbjct: 303 IVFFLFAVLVLLSVVGSIFFGVKTRDDLENGRATRWYLRPDDTTTYYNPKNAPAAAVLQF 362
Query: 362 LTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVD 421
LTALML+ YLIPISLYVSIEIVK+LQS+FINQDLHMY+EETDKPA ARTSNLNEELGQVD
Sbjct: 363 LTALMLFSYLIPISLYVSIEIVKVLQSVFINQDLHMYHEETDKPAHARTSNLNEELGQVD 422
Query: 422 TILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE----D 477
TILSDKTGTLTCNSMEFIKCS+ GT+YGRG+TEVERA+ARRK S L + + +
Sbjct: 423 TILSDKTGTLTCNSMEFIKCSVGGTAYGRGITEVERALARRKESTLPQNFGADNARLSGE 482
Query: 478 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537
K +KGFNF+DER+M+G+WV EP A+VIQKFL+LLAICHTALPE+DE+ GKISYEAESPD
Sbjct: 483 KTFVKGFNFKDERMMDGNWVKEPRANVIQKFLQLLAICHTALPEIDEKTGKISYEAESPD 542
Query: 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 597
EAAFVIAARE GFEFYER+QTSIS+ E DP + KVERSY LL+VLEF+S+RKRMSVI+R
Sbjct: 543 EAAFVIAAREFGFEFYERSQTSISLREFDPTSAKKVERSYQLLDVLEFNSTRKRMSVIIR 602
Query: 598 SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 657
+G LLLL KGADSVMFERLA+N EFEEQTK H+NEYADAGLRTL+LAYREL E+E+
Sbjct: 603 DSKGKLLLLCKGADSVMFERLAKNRCEFEEQTKVHVNEYADAGLRTLVLAYRELKEEEFN 662
Query: 658 QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI 717
F++EF +AKN+VS DR+++ +++ E +EK+LILLGATAVEDKLQNGVPECIDKLAQAGI
Sbjct: 663 SFHQEFIKAKNTVSTDRDDIIDQLTESVEKDLILLGATAVEDKLQNGVPECIDKLAQAGI 722
Query: 718 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSED--KSAAAAALKAS 775
K+WVLTGDKMETAINIGFACSLLRQGM+Q+IISSETPE K L+K ED KSAA A K S
Sbjct: 723 KIWVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEGKALDKVEDVHKSAAIKAFKTS 782
Query: 776 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 835
V+ Q+ K LL SS+E+ LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP
Sbjct: 783 VIQQITDAKALLTSSSETPETLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 842
Query: 836 KQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895
KQKA VT++VK KT STTLA+GDGANDVGM+QEADIG+GISGVEGMQAVMSSDIAIAQFR
Sbjct: 843 KQKAQVTQMVKVKTGSTTLAVGDGANDVGMIQEADIGIGISGVEGMQAVMSSDIAIAQFR 902
Query: 896 FLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNV 955
+LERLLLVHGHWCYRRISSMICYFFYKNI FGFTLFFFE YASFSGQ VYNDWFLSLYNV
Sbjct: 903 YLERLLLVHGHWCYRRISSMICYFFYKNIVFGFTLFFFEMYASFSGQTVYNDWFLSLYNV 962
Query: 956 FFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFF 1015
FFTSLPVIALGVFDQDVS+R+CLKF LLYQEGVQN+LFSW RI GW NG+ ++ IIFFF
Sbjct: 963 FFTSLPVIALGVFDQDVSSRYCLKFSLLYQEGVQNVLFSWVRIFGWVFNGLLSSVIIFFF 1022
Query: 1016 CIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFW 1075
C+ AM QAFR GEV+GLEILG TMYTCVVWVVNCQMALS++YFTYIQHLFIWG I W
Sbjct: 1023 CVGAMDYQAFRNSGEVVGLEILGVTMYTCVVWVVNCQMALSISYFTYIQHLFIWGSIVLW 1082
Query: 1076 YIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPL 1135
Y+FL+AYGA++P ISTTA++VFIEACAPAPSFW++TLL L +SLLPYF + +IQMRFFP+
Sbjct: 1083 YLFLMAYGAINPTISTTAFQVFIEACAPAPSFWILTLLALGASLLPYFVFGSIQMRFFPM 1142
Query: 1136 HHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEAS 1177
+HQMIQW ++DGQ +DPE+CQ+VRQRSLR TTVGYTARFEAS
Sbjct: 1143 YHQMIQWIKADGQLNDPEYCQVVRQRSLRHTTVGYTARFEAS 1184
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563129|ref|XP_003549818.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1970 bits (5103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 923/1164 (79%), Positives = 1052/1164 (90%)
Query: 16 AFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVRTTKYTLATFFPKAL 75
AF+CG+ S K +HSLIGGPGFSR V+CNDPE AS+LNY NYVRTTKYTLATF PK+L
Sbjct: 16 AFTCGRASMKEEHSLIGGPGFSRKVYCNDPERATASLLNYGDNYVRTTKYTLATFLPKSL 75
Query: 76 FEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEV 135
FEQFRRVAN YFL+CA+LSF P+SPYS +SNV+PL+VV+ ATM KE +ED+RRKKQDIE+
Sbjct: 76 FEQFRRVANFYFLVCAVLSFFPVSPYSGISNVVPLLVVVAATMVKEFIEDFRRKKQDIEM 135
Query: 136 NNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLD 195
NNRKVK+H G G FDY+KWRDLKVGDVV+VEKDEFFPADLILL+S+Y++AICYVET NLD
Sbjct: 136 NNRKVKLHRGGGVFDYSKWRDLKVGDVVRVEKDEFFPADLILLASNYDDAICYVETMNLD 195
Query: 196 GETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQL 255
GETNLKLKQA +ATS + EDSN QNF+A+I+CEDPNANLYTFVGS+EL +QQYPL PQQL
Sbjct: 196 GETNLKLKQAPEATSKLQEDSNVQNFRAVIKCEDPNANLYTFVGSMELGDQQYPLAPQQL 255
Query: 256 LLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSF 315
LLRDSKLRNTD +YG VIFTG DTKV QN+T PPSKRSK+E+RMDKIIY LF +L+L+SF
Sbjct: 256 LLRDSKLRNTDFVYGVVIFTGHDTKVMQNATDPPSKRSKIEKRMDKIIYCLFFVLILISF 315
Query: 316 IGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPIS 375
IGSIFFGIAT +DL++G+MKRWYLRPDDT YYDP AA+LHF TALMLY YLIPIS
Sbjct: 316 IGSIFFGIATNDDLENGRMKRWYLRPDDTEIYYDPNEPVAAAILHFFTALMLYSYLIPIS 375
Query: 376 LYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNS 435
LYVSIEIVK+LQS+FINQD+HMYYEETDKPA ARTSNLNEELGQVDTILSDKTGTLTCNS
Sbjct: 376 LYVSIEIVKVLQSVFINQDVHMYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNS 435
Query: 436 MEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGS 495
MEFIKCSIAG +YGRGVTEVERA++RR S +E+ + E K+SIKGFNF DER+MNG+
Sbjct: 436 MEFIKCSIAGVAYGRGVTEVERALSRRHESHPGQELKKISESKSSIKGFNFMDERVMNGN 495
Query: 496 WVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYER 555
W+ EP+A+VIQ FLRLLA+CHTA+PEVDEE GK+SYEAESPDEAAFVIAARELGFEFYER
Sbjct: 496 WIKEPNANVIQNFLRLLAVCHTAIPEVDEETGKVSYEAESPDEAAFVIAARELGFEFYER 555
Query: 556 TQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMF 615
T T+IS+ ELD ++G K+ RSY LLN+LEF+S+RKRMSVIV+ EEG LLLLSKGADSVMF
Sbjct: 556 THTTISLRELDTISGQKINRSYKLLNILEFTSARKRMSVIVKDEEGKLLLLSKGADSVMF 615
Query: 616 ERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRE 675
E++A+NGR+FEE+TK+HI EYAD+GLRTLILAYREL+++EY +FN+EFTEAKN VS D+E
Sbjct: 616 EQIAKNGRDFEEKTKQHIAEYADSGLRTLILAYRELNDEEYNKFNKEFTEAKNLVSEDQE 675
Query: 676 ELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGF 735
++ E I + IEK+LILLGATAVEDKLQ+GVPECIDKLAQAGIKLWVLTGDKMETAINIGF
Sbjct: 676 QIVEGIIQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGF 735
Query: 736 ACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLG 795
ACSLLRQGM+Q+IISS+TPE+K+LEK EDKSAA AA+K+SVL QL K LL +++E+
Sbjct: 736 ACSLLRQGMKQIIISSDTPETKSLEKMEDKSAAEAAIKSSVLRQLRESKALLSTADENYE 795
Query: 796 PLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLA 855
LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVK +T STTLA
Sbjct: 796 ALALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKMRTGSTTLA 855
Query: 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSM 915
IGDGANDVGMLQEADIG+GISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSM
Sbjct: 856 IGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSM 915
Query: 916 ICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSAR 975
ICYFFYKNIAFGFTLFFFE YASFSGQ YNDWF+SLYNVFFTSLPVIALGVFDQDVS++
Sbjct: 916 ICYFFYKNIAFGFTLFFFEMYASFSGQAAYNDWFMSLYNVFFTSLPVIALGVFDQDVSSK 975
Query: 976 FCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLE 1035
CLKFPLLYQEG QNILFSW RI+GWALNGV +AI+FFFCI +M+ QAFRKGGEV+GLE
Sbjct: 976 LCLKFPLLYQEGTQNILFSWKRIIGWALNGVVTSAIVFFFCIRSMEYQAFRKGGEVMGLE 1035
Query: 1036 ILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYK 1095
+LG TMYTCVVWVVNCQMALS++YFTYIQH+FIWG I FWYIFLLAYGA+DP STTAYK
Sbjct: 1036 VLGATMYTCVVWVVNCQMALSISYFTYIQHIFIWGSILFWYIFLLAYGAIDPSFSTTAYK 1095
Query: 1096 VFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFC 1155
VFIEA APAPSFW++T L+L++SLLPYF Y++IQ+RFFP++HQMIQW R+D QT DPE+C
Sbjct: 1096 VFIEALAPAPSFWIVTFLILIASLLPYFVYASIQLRFFPMYHQMIQWMRNDRQTSDPEYC 1155
Query: 1156 QMVRQRSLRPTTVGYTARFEASSR 1179
+VRQRS+R TTVG+TAR EAS R
Sbjct: 1156 NVVRQRSIRHTTVGFTARLEASKR 1179
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1189 | ||||||
| TAIR|locus:2026900 | 1200 | AT1G68710 [Arabidopsis thalian | 0.989 | 0.98 | 0.681 | 0.0 | |
| TAIR|locus:2102345 | 1202 | AT3G25610 [Arabidopsis thalian | 0.999 | 0.988 | 0.678 | 0.0 | |
| TAIR|locus:2031860 | 1203 | ACA.l "autoinhibited Ca2+/ATPa | 0.995 | 0.984 | 0.671 | 0.0 | |
| TAIR|locus:2007858 | 1216 | AT1G17500 [Arabidopsis thalian | 0.983 | 0.961 | 0.542 | 0.0 | |
| TAIR|locus:2030180 | 1228 | AT1G72700 [Arabidopsis thalian | 0.589 | 0.570 | 0.562 | 0.0 | |
| TAIR|locus:2088217 | 1243 | AT3G13900 [Arabidopsis thalian | 0.588 | 0.563 | 0.555 | 0.0 | |
| TAIR|locus:2020038 | 1240 | AT1G54280 [Arabidopsis thalian | 0.618 | 0.592 | 0.521 | 0.0 | |
| TAIR|locus:2025961 | 1213 | ALA3 "aminophospholipid ATPase | 0.931 | 0.913 | 0.441 | 9.9e-245 | |
| DICTYBASE|DDB_G0269380 | 1313 | DDB_G0269380 "P-type ATPase" [ | 0.582 | 0.527 | 0.402 | 2e-221 | |
| UNIPROTKB|E1BPC3 | 1251 | ATP8B1 "Uncharacterized protei | 0.410 | 0.390 | 0.398 | 6.3e-205 |
| TAIR|locus:2026900 AT1G68710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4264 (1506.1 bits), Expect = 0., P = 0.
Identities = 810/1188 (68%), Positives = 946/1188 (79%)
Query: 5 RRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVRTTK 64
RR++ S+++ +C + FK DHS IGGPGFSRVV+CN+P+S EA NYS NYVRTTK
Sbjct: 9 RRRRLQLSKLYTLTCAQACFKQDHSQIGGPGFSRVVYCNEPDSPEADSRNYSDNYVRTTK 68
Query: 65 YTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLE 124
YTLATF PK+LFEQFRRVAN YFL+ +L+FTPL+PY+A S ++PL+ VIGATM KE +E
Sbjct: 69 YTLATFLPKSLFEQFRRVANFYFLVTGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGVE 128
Query: 125 DWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLXXXXXXXXXXXXFFPADLILLSSSYEE 184
DWRR+KQD EVNNRKVKVH G+G+FD +W+ L FFPADL+LLSSSYE+
Sbjct: 129 DWRRQKQDNEVNNRKVKVHRGDGSFDAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYED 188
Query: 185 AICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSXXXX 244
AICYVET NLDGETNLK+KQ L+ TS++ ++ NF+ F+A ++CEDPNANLY+FVG+
Sbjct: 189 AICYVETMNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELK 248
Query: 245 XXXXXXXXXXXXXRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIY 304
RDSKLRNTD I+GAVIFTG DTKV QNST PPSKRS +E++MDKIIY
Sbjct: 249 GAKYPLSPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIY 308
Query: 305 FLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTA 364
+F +++ M+FIGS+ FG+ TR+DL+DG MKRWYLRPD ++ ++DPKRA VAA+ HFLTA
Sbjct: 309 LMFFMVITMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTA 368
Query: 365 LMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTIL 424
+MLY Y IPISLYVSIEIVK+LQSIFINQD+HMYYEE DKPARARTSNLNEELGQVDTIL
Sbjct: 369 VMLYSYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTIL 428
Query: 425 SDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL-----EEEVTEEQEDKA 479
SDKTGTLTCNSMEFIKCS+AGT+YGRGVTEVE AM RRKG PL E ++ E +A
Sbjct: 429 SDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEA 488
Query: 480 -----SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
++KGFNF DERIMNG+WV E HADVIQKF RLLA+CHT +PEVDE+ KISYEAE
Sbjct: 489 ITEESTVKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAE 548
Query: 535 SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV 594
SPDEAAFVIAARELGFEF+ RTQT+ISV ELD V+G +VER Y +LNVLEF+S+RKRMSV
Sbjct: 549 SPDEAAFVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMSV 608
Query: 595 IVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEK 654
IV+ E+G LLLL KGAD+VMFERL++NGREFEE+T++H+NEYADAGLRTLILAYRELDEK
Sbjct: 609 IVQEEDGKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEK 668
Query: 655 EYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQ 714
EYK FNE +EAK+SVSADR GATAVEDKLQNGVP+CIDKLAQ
Sbjct: 669 EYKVFNERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQ 728
Query: 715 AGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXXX 774
AGIK+WVLTGDKMETAINIGFACSLLRQ M+Q+II+ ETPE ++
Sbjct: 729 AGIKIWVLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKE 788
Query: 775 XVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS 834
VL Q+I GK L S + ALIIDGKSL YAL+DD+K +FLELA+ CASVICCRSS
Sbjct: 789 NVLSQIINGKTQLKYSGGNA--FALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSS 846
Query: 835 PKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894
PKQKALVTRLVK+ TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF
Sbjct: 847 PKQKALVTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 906
Query: 895 RFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYN 954
R+LERLLLVHGHWCYRRIS+MICYFFYKNI FGFTLF +E Y +FS P YNDWFLSLYN
Sbjct: 907 RYLERLLLVHGHWCYRRISTMICYFFYKNITFGFTLFLYETYTTFSSTPAYNDWFLSLYN 966
Query: 955 VFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFF 1014
VFF+SLPVIALGVFDQDVSAR+CLKFPLLYQEGVQN+LFSW RILGW NG +A IIFF
Sbjct: 967 VFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILGWMFNGFYSAVIIFF 1026
Query: 1015 FCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITF 1074
C +++ QAF G+ G EILG TMYTC+VWVVN QMAL+++YFT IQH+ IW I
Sbjct: 1027 LCKSSLQSQAFNHDGKTPGREILGGTMYTCIVWVVNLQMALAISYFTLIQHIVIWSSIVV 1086
Query: 1075 WYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWXXXXXXXXXXXXPYFTYSAIQMRFFP 1134
WY F+ YG + IST AYKVF+EA AP+ S+W PYF YSA+QM FFP
Sbjct: 1087 WYFFITVYGELPSRISTGAYKVFVEALAPSLSYWLITLFVVVATLMPYFIYSALQMSFFP 1146
Query: 1135 LHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEASSRDLK 1182
++H MIQW R +GQ +DPE+C +VRQRS+RPTTVG+TAR EA R ++
Sbjct: 1147 MYHGMIQWLRYEGQCNDPEYCDIVRQRSIRPTTVGFTARLEAKKRSVR 1194
|
|
| TAIR|locus:2102345 AT3G25610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4244 (1499.0 bits), Expect = 0., P = 0.
Identities = 811/1196 (67%), Positives = 950/1196 (79%)
Query: 1 MAG--NRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGN 58
MAG RR++ H S+I++++CGK+SF+ DHS IGGPGFSRVV+CN+P S A NY+GN
Sbjct: 1 MAGPSRRRRRLHLSKIYSYTCGKSSFQEDHSNIGGPGFSRVVYCNEPGSPAAERRNYAGN 60
Query: 59 YVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATM 118
YVR+TKYT+A+FFPK+LFEQFRRVAN YFL+ ILS T LSPY AVS +LPL +VI ATM
Sbjct: 61 YVRSTKYTVASFFPKSLFEQFRRVANFYFLVTGILSLTDLSPYGAVSALLPLALVISATM 120
Query: 119 GKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLXXXXXXXXXXXXFFPADLILL 178
KE +EDWRRK+QDIEVNNRKVKVH G G F +WR+L FFPADL+LL
Sbjct: 121 VKEGIEDWRRKQQDIEVNNRKVKVHDGNGIFRQEEWRNLRVGDIVRVEKDEFFPADLLLL 180
Query: 179 SSSYEEAICYVETTNLDGETNLKLKQALDATSNM-HEDSNFQNFKAIIRCEDPNANLYTF 237
SSSYE+++CYVET NLDGETNLK+KQ L+ATS++ ++DS+F++F+ ++RCEDPN NLY F
Sbjct: 181 SSSYEDSVCYVETMNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVF 240
Query: 238 VGSXXXXXXXXXXXXXXXXXRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVER 297
VG+ RDSKLRNT+ +YGAV+FTG DTKV QNST PPSKRS++ER
Sbjct: 241 VGTLALEEERFPLSIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIER 300
Query: 298 RMDKIIYFLFGILVLMSFIGSIFFGIATRED-LQDGKMKRWYLRPDDTTAYYDPKRAAVA 356
MDKIIY +FG++ LMSF+GSI FG+ TRED +++G+ +RWYL+PDD ++DP+RA +A
Sbjct: 301 TMDKIIYLMFGLVFLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMA 360
Query: 357 AVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEE 416
A+ HF TA MLY Y IPISLYVSIEIVK+LQSIFIN+D+HMYYEETDKPA+ARTSNLNEE
Sbjct: 361 AIYHFFTATMLYSYFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEE 420
Query: 417 LGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKG-SPLEEEVTEEQ 475
LG VDTILSDKTGTLTCNSMEFIKCSIAG +YGRG+TEVERAMA R G SPL E +
Sbjct: 421 LGMVDTILSDKTGTLTCNSMEFIKCSIAGKAYGRGITEVERAMAVRSGGSPLVNEDLDVV 480
Query: 476 EDKAS--IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEA 533
D++ +KGFNFEDER+MNG+WV +P A V+QKF RLLA+CHTA+PE DEE+G +SYEA
Sbjct: 481 VDQSGPKVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIPETDEESGNVSYEA 540
Query: 534 ESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMS 593
ESPDEAAFV+AARE GFEF+ RTQ IS ELD V+G KVER Y LLNVLEF+S+RKRMS
Sbjct: 541 ESPDEAAFVVAAREFGFEFFNRTQNGISFRELDLVSGEKVERVYRLLNVLEFNSTRKRMS 600
Query: 594 VIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDE 653
VIVR ++G LLLLSKGAD+VMFERLA+NGR+FE +T+EH+N+YADAGLRTL+LAYRE+DE
Sbjct: 601 VIVRDDDGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAGLRTLVLAYREVDE 660
Query: 654 KEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLA 713
EY +FN+ F EAK SVS DR GATAVEDKLQNGVPECIDKLA
Sbjct: 661 NEYIEFNKSFNEAKASVSEDREALIDEITDKMERDLILLGATAVEDKLQNGVPECIDKLA 720
Query: 714 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXX 773
QAGIK+WVLTGDKMETAINIGFA SLLRQ M+Q+II+ ETP+ K+
Sbjct: 721 QAGIKIWVLTGDKMETAINIGFASSLLRQEMKQIIINLETPQIKSLEKSGGKDEIELASR 780
Query: 774 XXVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS 833
V+ QL GK LL +S S ALIIDGKSLTYALED++K +FL+LA CASVICCRS
Sbjct: 781 ESVVMQLQEGKALLAASGASSEAFALIIDGKSLTYALEDEIKKMFLDLATSCASVICCRS 840
Query: 834 SPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893
SPKQKALVTRLVK+ T TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ
Sbjct: 841 SPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 900
Query: 894 FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLY 953
FR+LERLLLVHGHWCY RI+SMICYFFYKNI FG T+F +EAY SFSGQP YNDWFLSL+
Sbjct: 901 FRYLERLLLVHGHWCYSRIASMICYFFYKNITFGVTVFLYEAYTSFSGQPAYNDWFLSLF 960
Query: 954 NVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIF 1013
NVFF+SLPVIALGVFDQDVSARFC KFPLLYQEGVQNILFSW RI+GW NG +A IF
Sbjct: 961 NVFFSSLPVIALGVFDQDVSARFCYKFPLLYQEGVQNILFSWKRIIGWMFNGFISALAIF 1020
Query: 1014 FFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGIT 1073
F C ++K Q F G+ G EILG TMYTCVVWVVN QMALS++YFT++QH+ IWG I
Sbjct: 1021 FLCKESLKHQLFDPDGKTAGREILGGTMYTCVVWVVNLQMALSISYFTWVQHIVIWGSIA 1080
Query: 1074 FWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWXXXXXXXXXXXXPYFTYSAIQMRFF 1133
FWYIFL+ YGAM P ST AY VF+EA APAPS+W PYF Y ++QMRFF
Sbjct: 1081 FWYIFLMIYGAMTPSFSTDAYMVFLEALAPAPSYWLTTLFVMIFALIPYFVYKSVQMRFF 1140
Query: 1134 PLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEASSRDLKAKLEDSL 1189
P +HQMIQW R +G ++DPEF +MVRQRS+RPTTVGYTAR AS R A+ D +
Sbjct: 1141 PKYHQMIQWIRYEGHSNDPEFVEMVRQRSIRPTTVGYTARRAASVRR-SARFHDQI 1195
|
|
| TAIR|locus:2031860 ACA.l "autoinhibited Ca2+/ATPase II" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4138 (1461.7 bits), Expect = 0., P = 0.
Identities = 801/1193 (67%), Positives = 926/1193 (77%)
Query: 5 RRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVRTTK 64
RR++ H S I+AF K++F+ DHS IGGPGFSRVV+CN+P S A NY GNYVR+TK
Sbjct: 5 RRRRLHLSNIYAFKGRKSNFQEDHSHIGGPGFSRVVYCNEPNSPAAERRNYVGNYVRSTK 64
Query: 65 YTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLE 124
YTLA+F PK+LFEQFRRVAN YFL+ +LS T LSPYS +S +LPL VI A+M KE +E
Sbjct: 65 YTLASFIPKSLFEQFRRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMVKEAIE 124
Query: 125 DWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLXXXXXXXXXXXXFFPADLILLSSSYEE 184
DW RKKQDIE+NNRKVKVH G G F WRDL FFPADL+LLSSSYE+
Sbjct: 125 DWGRKKQDIEMNNRKVKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLSSSYED 184
Query: 185 AICYVETTNLDGETNLKLKQALDATSN-MHEDSNFQNFKAIIRCEDPNANLYTFVGSXXX 243
+ICYVET NLDGETNLK+KQ L+ATS+ +HEDS+F+ KA+++CEDPNA+LYTFVG+
Sbjct: 185 SICYVETMNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVGTLHF 244
Query: 244 XXXXXXXXXXXXXXRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKII 303
RDSKLRNT+ IYG V+FTG DTKV QNST PPSKRS++ER+MDKII
Sbjct: 245 EEQRLPLSITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKMDKII 304
Query: 304 YFLFGILVLMSFIGSIFFGIATREDL--QDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHF 361
Y +FG++ LMSFIGSI FGI TRED G+ +RWYLRPD+ ++DP RA +AAV HF
Sbjct: 305 YLMFGVVFLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMAAVYHF 364
Query: 362 LTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVD 421
TA+MLY Y IPISLYVSIEIVK+LQS+FIN D+ MYYEE DKPA ARTSNLNEELG VD
Sbjct: 365 FTAVMLYSYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEELGMVD 424
Query: 422 TILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRK-GSPLEEEVTEEQEDKAS 480
TILSDKTGTLTCNSMEFIKCSIAGT+YGRG+TEVER+MA R GS L + + D++
Sbjct: 425 TILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVERSMAMRSNGSSLVGDDLDVVVDQSG 484
Query: 481 --IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDE 538
IKGFNF DER+M G+WV + A V+QKF RLLA+CHTA+PE DE G +SYEAESPDE
Sbjct: 485 PKIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSYEAESPDE 544
Query: 539 AAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRS 598
AAFV+AARE GFEF+ RTQ IS ELD +G VER Y LLNVLEF+S+RKRMSVIVR
Sbjct: 545 AAFVVAAREFGFEFFSRTQNGISFRELDLASGKTVERVYRLLNVLEFNSARKRMSVIVRD 604
Query: 599 EEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQ 658
E+G LLLLSKGAD+VMFERLA+NGR+FEE+T+EH+NEYADAGLRTLILAYRE+DE EY +
Sbjct: 605 EDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREVDENEYIE 664
Query: 659 FNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQAGIK 718
F++ F EAKNSV+ADR GATAVEDKLQNGVP+CIDKLAQAGIK
Sbjct: 665 FSKNFNEAKNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDKLAQAGIK 724
Query: 719 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXXXXVLH 778
+WVLTGDKMETAINIGFACSLLRQ M+Q+II+ ETP K V++
Sbjct: 725 IWVLTGDKMETAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHASRESVVN 784
Query: 779 QLIRGKELL--DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPK 836
Q+ GK LL SS S ALIIDGKSLTYALEDD K FL+LA GCASVICCRSSPK
Sbjct: 785 QMEEGKALLTASSSASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVICCRSSPK 844
Query: 837 QKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 896
QKALVTRLVK+ T TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR+
Sbjct: 845 QKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRY 904
Query: 897 LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVF 956
LERLLLVHGHWCY RISSMICYFFYKNI FG T+F +EAY SFS QP YNDWFLSL+NVF
Sbjct: 905 LERLLLVHGHWCYSRISSMICYFFYKNITFGVTVFLYEAYTSFSAQPAYNDWFLSLFNVF 964
Query: 957 FTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFC 1016
F+SLPVIALGVFDQDVSAR+C KFPLLYQEGVQN+LFSW RI+GW NGV A IFF C
Sbjct: 965 FSSLPVIALGVFDQDVSARYCYKFPLLYQEGVQNLLFSWKRIIGWMFNGVFTALAIFFLC 1024
Query: 1017 IHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWY 1076
++K Q + G+ G EILG TMYTCVVWVVN QMAL+++YFT++QH+ IWG + FWY
Sbjct: 1025 KESLKHQLYNPNGKTAGREILGGTMYTCVVWVVNLQMALAISYFTWLQHIVIWGSVAFWY 1084
Query: 1077 IFLLAYGAMDPYISTTAYKVFIEACAPAPSFWXXXXXXXXXXXXPYFTYSAIQMRFFPLH 1136
IFL+ YGA+ P ST AYKVFIEA APAPS+W P+F + ++QMRFFP +
Sbjct: 1085 IFLMIYGAITPSFSTDAYKVFIEALAPAPSYWLTTLFVMFFALIPFFVFKSVQMRFFPGY 1144
Query: 1137 HQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEASSRDLKAKLEDSL 1189
HQMIQW R +G ++DPEF +MVRQRS+RPTTVG+TAR AS R + D L
Sbjct: 1145 HQMIQWIRYEGHSNDPEFVEMVRQRSIRPTTVGFTARRAASVRR-SGRFHDQL 1196
|
|
| TAIR|locus:2007858 AT1G17500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3295 (1165.0 bits), Expect = 0., P = 0.
Identities = 654/1206 (54%), Positives = 830/1206 (68%)
Query: 3 GNRRKKHHFSRIHAFSCGKTSF-KG-DHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
G R K S I+ F C + S +G D I GPGFSR V+CN P + L Y NYV
Sbjct: 4 GRIRSKLRLSHIYTFGCLRPSADEGQDPHPIQGPGFSRTVYCNQPHMHKKKPLKYRSNYV 63
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
TT+Y L TFFPK L+EQF R AN YFL+ AILS PLSP++ S + PLV V+G +M K
Sbjct: 64 STTRYNLITFFPKCLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLK 123
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLXXXXXXXXXXXXFFPADLILLSS 180
E LEDW R QD+++N KV VH +G F KW+ + FFPADL+LLSS
Sbjct: 124 EALEDWSRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLLLSS 183
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
SYE+ ICYVET NLDGETNLK+K++L+ T ++ + +F++F IIRCEDPN +LYTFVG+
Sbjct: 184 SYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTFVGN 243
Query: 241 XXXXXXXXXXXXXXXXXRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
RDSKLRNT +YG V+FTG DTKV QNST PSKRS++E+ MD
Sbjct: 244 LEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKTMD 303
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
IIY L +L+L+S I S F T+ + K WYLRP++ +P A +H
Sbjct: 304 YIIYTLLVLLILISCISSSGFAWETKFHMP----KWWYLRPEEPENLTNPSNPVYAGFVH 359
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
+TAL+LYGYLIPISLYVSIE+VK+LQ+ FIN+DLHMY E+ PA ARTSNLNEELGQV
Sbjct: 360 LITALLLYGYLIPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQV 419
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEE--EVTE----- 473
DTILSDKTGTLTCN M+F+KCSIAGTSYG +EVE A A++ L+E EV+
Sbjct: 420 DTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTP 479
Query: 474 -------EQEDKAS----IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEV 522
E E + IKGF FED R+M+G+W+ EPH D I F R+LAICHTA+PE+
Sbjct: 480 RAQARDIEVESSITPRIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIPEL 539
Query: 523 DEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNV 582
+EE GK +YEAESPDEA+F+ AA E GF F++RTQ+S+ VHE +G +ER Y +LN+
Sbjct: 540 NEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREYKVLNL 599
Query: 583 LEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLR 642
L+F+S RKRMSV+VR EEG +LLL KGADS++FERLA+NG+ + T +H+NEY +AGLR
Sbjct: 600 LDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYGEAGLR 659
Query: 643 TLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQ 702
TL L+YR+LDE+EY +N EF +AK S+ +DR GATAVEDKLQ
Sbjct: 660 TLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDKLQ 719
Query: 703 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXX 762
GVP+CIDKLAQAG+KLWVLTGDKMETAINIG++CSLLRQGM+Q+ I+ E +
Sbjct: 720 KGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSEGASQDAK 779
Query: 763 XXXXXXXXXXXXXVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA 822
+L+Q+ + +++ + ALIIDGK+LTYALED++K FL LA
Sbjct: 780 AVKDN--------ILNQITKAVQMVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALA 831
Query: 823 IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 882
+ CASVICCR SPKQKALVTRLVK T TLAIGDGANDVGM+QEADIGVGISGVEGMQ
Sbjct: 832 VDCASVICCRVSPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQ 891
Query: 883 AVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQ 942
AVM+SD +IAQFRFLERLL+VHGHWCY+RI+ MICYFFYKNIAFG TLF+FEA+ FSGQ
Sbjct: 892 AVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQ 951
Query: 943 PVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWA 1002
VYND++L L+NV TSLPVIALGVF+QDVS+ CL+FP LYQ+G +N+ F W RILGW
Sbjct: 952 SVYNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICLQFPALYQQGKKNLFFDWYRILGWM 1011
Query: 1003 LNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTY 1062
NGV ++ +IFF I + +QAFR G+ ++ +GTTM+TC++W VN Q+AL+V++FT+
Sbjct: 1012 GNGVYSSLVIFFLNIGIIYEQAFRVSGQTADMDAVGTTMFTCIIWAVNVQIALTVSHFTW 1071
Query: 1063 IQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWXXXXXXXXXXXXPY 1122
IQH+ IWG I WY+F+ YG M P +S Y++ +E APAP +W PY
Sbjct: 1072 IQHVLIWGSIGLWYLFVALYGMMPPSLSGNIYRILVEILAPAPIYWIATFLVTVTTVLPY 1131
Query: 1123 FTYSAIQMRFFPLHHQMIQ---WFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEASSR 1179
F + + Q PL H +IQ +++ D +D R ++ T +G+TAR +A R
Sbjct: 1132 FAHISFQRFLHPLDHHIIQEIKYYKRD--VEDRRMWTRERTKAREKTKIGFTARVDAKIR 1189
Query: 1180 DLKAKL 1185
L++KL
Sbjct: 1190 HLRSKL 1195
|
|
| TAIR|locus:2030180 AT1G72700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2081 (737.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 399/709 (56%), Positives = 503/709 (70%)
Query: 478 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537
+A IKGF FED R+MNG+W+ E + I +F R+LAICHTA+PE++EE GK +YEAESPD
Sbjct: 506 RAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRILAICHTAIPELNEETGKYTYEAESPD 565
Query: 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 597
EA+F+ AARE GFEF++RTQ+S+ + E +G +ER Y +LN+LEF+S RKRM+VIVR
Sbjct: 566 EASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQIIEREYKVLNLLEFTSKRKRMTVIVR 625
Query: 598 SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 657
EEG +LLL KGADS++FERLA+NG+ + T H+ EY +AGLRTL LAYR+LDE EY
Sbjct: 626 DEEGQILLLCKGADSIIFERLAKNGKTYLGPTTRHLTEYGEAGLRTLALAYRKLDEDEYA 685
Query: 658 QFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQAGI 717
+N EF +AK S+ +DR GATAVEDKLQ GVP+CIDKLAQAG+
Sbjct: 686 AWNSEFLKAKTSIGSDRDELLETGADMIEKELILIGATAVEDKLQKGVPQCIDKLAQAGL 745
Query: 718 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXXXXVL 777
KLWVLTGDKMETAINIGFACSLLRQGMRQ+ I+S E + +L
Sbjct: 746 KLWVLTGDKMETAINIGFACSLLRQGMRQICITSMNSEGGSQDSKRVVKEN-------IL 798
Query: 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQ 837
+QL + +++ + ALIIDGK+LTYALEDD+K FL LA+ CASVICCR SPKQ
Sbjct: 799 NQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALEDDMKYQFLALAVDCASVICCRVSPKQ 858
Query: 838 KALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL 897
KALV RLVK T TTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFL
Sbjct: 859 KALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFL 918
Query: 898 ERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFF 957
ERLL+VHGHWCY+RI+ MICYFFYKNIAFG TLF+FEA+ FSGQ VYND++L L+NV
Sbjct: 919 ERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLFNVVL 978
Query: 958 TSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCI 1017
TSLPVIALGVF+QDVS+ CL+FP LYQ+G +N+ F W+RILGW NGV + +IFF I
Sbjct: 979 TSLPVIALGVFEQDVSSEICLQFPALYQQGTKNLFFDWSRILGWMCNGVYASLVIFFLNI 1038
Query: 1018 HAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYI 1077
+ QAFR G+ ++ +GTTM+TC++W N Q+AL++++FT+IQH+ IWG I WY+
Sbjct: 1039 GIIYSQAFRDNGQTADMDAVGTTMFTCIIWAANVQIALTMSHFTWIQHVLIWGSIGMWYL 1098
Query: 1078 FLLAYGAMDPYISTTAYKVFIEACAPAPSFWXXXXXXXXXXXXPYFTYSAIQMRFFPLHH 1137
F+ Y M P S Y++ E APAP +W PY + A Q PL H
Sbjct: 1099 FVAIYSMMPPSYSGNIYRILDEILAPAPIYWMATLLVTVAAVLPYVAHIAFQRFLNPLDH 1158
Query: 1138 QMIQWFRSDGQT-DDPEFCQMVRQRSLRPTTVGYTARFEASSRDLKAKL 1185
+IQ + G+ +D R ++ T +G+TAR +A R L++KL
Sbjct: 1159 HIIQEIKYYGRDIEDARLWTRERTKAREKTKIGFTARVDAKIRHLRSKL 1207
|
|
| TAIR|locus:2088217 AT3G13900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2070 (733.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 399/718 (55%), Positives = 503/718 (70%)
Query: 474 EQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEA 533
+Q IKGF+FED+R+M G+W+NEP++D I FLR+LA+CHTA+PEVDE+ GK +YEA
Sbjct: 511 DQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDILMFLRILAVCHTAIPEVDEDTGKCTYEA 570
Query: 534 ESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMS 593
ESPDE AF++AA E GFEF +RTQ+S+ + E +G VER Y +LNVL+F+S RKRMS
Sbjct: 571 ESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH--SGQPVEREYKVLNVLDFTSKRKRMS 628
Query: 594 VIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDE 653
VIVR E+G +LLL KGADS++FERL++NG+ + E T +H+N Y +AGLRTL L+YR+LDE
Sbjct: 629 VIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEATSKHLNGYGEAGLRTLALSYRKLDE 688
Query: 654 KEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLA 713
EY +N EF +AK SV ADR GATAVEDKLQ GVP+CIDKLA
Sbjct: 689 TEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDKLA 748
Query: 714 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXX 773
QAG+K+WVLTGDKMETAINIG+ACSLLRQGM+Q+ I+ E +
Sbjct: 749 QAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIYIALRNEEGSSQDPEAAAREN----- 803
Query: 774 XXVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS 833
+L Q+I +++ + ALIIDGK+LTYALEDD+K FL LA+ CASVICCR
Sbjct: 804 --ILMQIINASQMIKLEKDPHAAFALIIDGKTLTYALEDDIKYQFLALAVDCASVICCRV 861
Query: 834 SPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893
SPKQKALVTRL K T TTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQ
Sbjct: 862 SPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQ 921
Query: 894 FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLY 953
FRFLERLL+VHGHWCY+RI+ MICYFFYKNI FG TLF+FEA+ FSGQ +YND +L L+
Sbjct: 922 FRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFEAFTGFSGQAIYNDSYLLLF 981
Query: 954 NVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIF 1013
NV TSLPVIALGVF+QDVS+ CL+FP LYQ+G +N+ F W RI+GW NGV + +IF
Sbjct: 982 NVILTSLPVIALGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRIIGWMANGVYASVVIF 1041
Query: 1014 FFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGIT 1073
I Q+F GG+ ++ +GT M+TC++W VN Q+AL++++FT+IQH+ IWG I
Sbjct: 1042 SLNIGIFHVQSFCSGGQTADMDAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVLIWGSIV 1101
Query: 1074 FWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWXXXXXXXXXXXXPYFTYSAIQMRFF 1133
WYIFL +G + P +S + + E APAP FW PY Y + Q
Sbjct: 1102 TWYIFLALFGMLPPKVSGNIFHMLSETLAPAPIFWLTSLLVIAATTLPYLAYISFQRSLN 1161
Query: 1134 PLHHQMIQ---WFRSDGQTDDPEFCQMVRQRSL--RPTTVGYTARFEASSRDLKAKLE 1186
PL H +IQ FR D Q + C R+RS T +G TAR +A R L+ +L+
Sbjct: 1162 PLDHHIIQEIKHFRIDVQDE----CMWTRERSKAREKTKIGVTARVDAKIRQLRGRLQ 1215
|
|
| TAIR|locus:2020038 AT1G54280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2024 (717.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 393/753 (52%), Positives = 511/753 (67%)
Query: 443 IAGTSYGRGVTEVERAMARRKGSPLEEE--VT----EEQEDKASIKGFNFEDERIMNGSW 496
+A S +G T+ +A + S E E VT ++Q+ +KGF+FED R+MN +W
Sbjct: 474 VANLSMNKGRTQRYAKLASKTSSDFELETVVTASDEKDQKQNTGVKGFSFEDNRLMNENW 533
Query: 497 VNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT 556
+NEP++D I F R+LA+CHTA+PEVDE+ G +YEAESPDE AF++A+RE GFEF +RT
Sbjct: 534 LNEPNSDDILMFFRILAVCHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEFTKRT 593
Query: 557 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFE 616
Q+S+ + E +G V+R Y +LN+L+F+S RKRMS IVR EEG +LLL KGADS++FE
Sbjct: 594 QSSVFIAERFSSSGQPVDREYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADSIIFE 653
Query: 617 RLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXX 676
RL+++G+E+ T +H+N Y +AGLRTL L YR+LDE EY +N EF +AK SV ADR
Sbjct: 654 RLSKSGKEYLGATSKHLNVYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGADRDE 713
Query: 677 XXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 736
GATAVEDKLQ GVP+CID LAQAG+K+WVLTGDKMETAINIG+A
Sbjct: 714 MLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGYA 773
Query: 737 CSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESLGP 796
CSLLRQGM+Q+ IS E + +L Q+ +++ +
Sbjct: 774 CSLLRQGMKQISISLTNVEESSQNSEAAAKES-------ILMQITNASQMIKIEKDPHAA 826
Query: 797 LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 856
ALIIDGK+LTYAL+DDVK FL LA+ CASVICCR SPKQKALVTRL K T TTLAI
Sbjct: 827 FALIIDGKTLTYALKDDVKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAI 886
Query: 857 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMI 916
GDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHWCY+RI+ MI
Sbjct: 887 GDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 946
Query: 917 CYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARF 976
CYFFYKNI FG TLF+FE + FSGQ +YND +L L+NV TSLPVI+LGVF+QDV +
Sbjct: 947 CYFFYKNITFGLTLFYFECFTGFSGQSIYNDSYLLLFNVVLTSLPVISLGVFEQDVPSDV 1006
Query: 977 CLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEI 1036
CL+FP LYQ+G +N+ F W RILGW NGV + +IF + Q+FR G+ +
Sbjct: 1007 CLQFPALYQQGPKNLFFDWYRILGWMGNGVYASIVIFTLNLGIFHVQSFRSDGQTADMNA 1066
Query: 1037 LGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKV 1096
+GT M+TC++W VN Q+AL++++FT+IQH+ IWG I WY+FL YG + +S + +
Sbjct: 1067 MGTAMFTCIIWAVNVQIALTMSHFTWIQHVMIWGSIGAWYVFLALYGMLPVKLSGNIFHM 1126
Query: 1097 FIEACAPAPSFWXXXXXXXXXXXXPYFTYSAIQMRFFPLHHQMIQ---WFRSDGQTDDPE 1153
+E APAP FW PY + + Q PL H +IQ FR D +D
Sbjct: 1127 LVEILAPAPIFWLTSLLVIAATTLPYLFHISYQRSVNPLDHHIIQEIKHFRID--VEDER 1184
Query: 1154 FCQMVRQRSLRPTTVGYTARFEASSRDLKAKLE 1186
+ + ++ T +G+TAR +A R L+ +L+
Sbjct: 1185 MWKREKSKAREKTKIGFTARVDAKIRQLRGRLQ 1217
|
|
| TAIR|locus:2025961 ALA3 "aminophospholipid ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2358 (835.1 bits), Expect = 9.9e-245, P = 9.9e-245
Identities = 501/1136 (44%), Positives = 685/1136 (60%)
Query: 38 RVVHCNDPESFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP 97
R V+CND ES + + + GN + TTKY + TF PK LFEQFRR+AN+YFL + LS TP
Sbjct: 36 RTVYCNDRESNQP--VRFKGNSISTTKYNVFTFLPKGLFEQFRRIANIYFLGISCLSMTP 93
Query: 98 LSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDL 157
+SP S ++NV PL +V+ ++ KE EDW+R + D+ +NN V++ + + WR L
Sbjct: 94 ISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSINNSTVEI-LQDQQWVSIPWRKL 152
Query: 158 XXXXXXXXXXXXFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSN 217
FFPAD++ +SS+ + ICYVET NLDGETNLK+++AL+ T +
Sbjct: 153 QVGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDGETNLKIRKALERTWDYLVPEK 212
Query: 218 FQNFKAIIRCEDPNANLYTFVGSXXXXXXXXXXXXXXXXXRDSKLRNTDCIYGAVIFTGR 277
FK I+CE PN +LYTF G+ R LRNT+ I GAV+FTG
Sbjct: 213 AYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLLLRGCSLRNTEYIVGAVVFTGH 272
Query: 278 DTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIAT-REDLQDGKMKR 336
+TKV N+ PSKRS +E+++DK+I +F +LV M IG+I I T RED G
Sbjct: 273 ETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIGCSIVTDREDKYLG---- 328
Query: 337 WYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSI-FINQDL 395
L D ++ + + F T + L+ +IPISLYVSIE++K +QS FIN+DL
Sbjct: 329 --LHNSD----WEYRNGLMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQFINRDL 382
Query: 396 HMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEV 455
+MY+ ET+ PA ARTSNLNEELGQV+ I SDKTGTLT N MEF KCSI G SYG GVTE+
Sbjct: 383 NMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEI 442
Query: 456 ERAMARRKGSPLEEEVTEEQEDKASI--KGFNFEDERIMNGSWVNEPHADVIQKFLRLLA 513
E+ +A+R G +V EEQ +I KGFNF+D R+M G+W NEP+ D+ ++ R LA
Sbjct: 443 EKGIAQRHGL----KVQEEQRSTGAIREKGFNFDDPRLMRGAWRNEPNPDLCKELFRCLA 498
Query: 514 ICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKV 573
ICHT LPE DE KI Y+A SPDEAA V AA+ GF FY RT T + V E K+
Sbjct: 499 ICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTMVYVRESHVEKMGKI 558
Query: 574 ER-SYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEH 632
+ +Y +LNVLEF+S+RKR SV+ R +G L+L KGAD+V+FERLA + + T+EH
Sbjct: 559 QDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERLANGMDDVRKVTREH 618
Query: 633 INEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXX 692
+ + +GLRTL LAY++L+ + Y +NE+F +AK+++ DR
Sbjct: 619 LEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALR-DREKKLDEVAELIEKDLILI 677
Query: 693 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE 752
G+TA+EDKLQ GVP CI+ L++AGIK+WVLTGDKMETAINI +AC+L+ M+Q +ISSE
Sbjct: 678 GSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFVISSE 737
Query: 753 TPESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESL-GP-LALIIDGKSLTYAL 810
T + V +L + E S ++ GP L+L+IDGK L YAL
Sbjct: 738 TDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGPKLSLVIDGKCLMYAL 797
Query: 811 EDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 870
+ ++ + L L++ C SV+CCR SP QKA VT LV+ TL+IGDGANDV M+Q A
Sbjct: 798 DPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDGANDVSMIQAAH 857
Query: 871 IGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 930
+G+GISG+EGMQAVM+SD AIAQFRFL LLLVHG W Y RI ++ YFFYKN+ F T
Sbjct: 858 VGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVMYFFYKNLTFTLTQ 917
Query: 931 FFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQN 990
F+F FSGQ Y+DWF SL+NV FT+LPVI LG+F++DVSA ++P LY+EG++N
Sbjct: 918 FWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLSKRYPELYREGIRN 977
Query: 991 ILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVN 1050
F W + WA + V + + + F + A G+V GL + T ++TC+V VN
Sbjct: 978 SFFKWRVVAVWATSAVYQSLVCYLF-VTTSSFGAVNSSGKVFGLWDVSTMVFTCLVIAVN 1036
Query: 1051 CQMALSVTYFTYIQHLFIWGGITFWYIFLLAY-GAMDPYISTTAYKVFIEACAPAPSFWX 1109
++ L T ++ + G I W +F Y G M P+ I F+
Sbjct: 1037 VRILLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPHDRNENVYFVIYVLMSTFYFYF 1096
Query: 1110 XXXXXXXXXXXPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRP 1165
F + ++ FFP +Q++Q ++D + Q+ + L P
Sbjct: 1097 TLLLVPIVSLLGDFIFQGVERWFFPYDYQIVQEIHRH-ESDASKADQLEVENELTP 1151
|
|
| DICTYBASE|DDB_G0269380 DDB_G0269380 "P-type ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1296 (461.3 bits), Expect = 2.0e-221, Sum P(2) = 2.0e-221
Identities = 293/728 (40%), Positives = 426/728 (58%)
Query: 35 GFSRVVHCNDPESFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILS 94
G SR + N PE + N + TTKYT +F PK L+EQFRR AN YFL+ A++
Sbjct: 160 GSSRNIFINQPE--RNIPFKFIHNKISTTKYTPWSFIPKNLYEQFRRAANFYFLVIAVIQ 217
Query: 95 FTP-LSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTK 153
P +SP +A + +PL+ V+ T KE +ED +R D VNN ++ G F+
Sbjct: 218 LIPGISPVNAYTTWIPLIFVLAVTAVKEGIEDIKRNLSDKTVNNLDCRI-LRNGKFEIVP 276
Query: 154 WRDLXXXXXXXXXXXXFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSN-M 212
W+ + FPADL++L+SS + +CY+ET+NLDGETNLK +QA+ T +
Sbjct: 277 WKQVKVGDICQVNKGERFPADLVVLNSSEQHGVCYIETSNLDGETNLKQRQAIPQTFEIL 336
Query: 213 HEDSNFQNFKAIIRCEDPNANLYTFVGSXXXXXXXXXX--XXXXXXXRDSKLRNTDCIYG 270
+ + +F+ I CE PN +Y + G+ R LRNT+ IYG
Sbjct: 337 RSEEDLAHFRGNIECEHPNNVIYVYNGAIQMTDDSQKHPLNNTQTLLRGCVLRNTEWIYG 396
Query: 271 AVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQ 330
AV++TG DTK+ QNST PSKRS +E+ +++ + LF I+ ++ +G I I T ++
Sbjct: 397 AVVYTGEDTKLMQNSTDAPSKRSTLEKLVNRALINLFIIMFVVCVVGMIVSVILTSTNID 456
Query: 331 DGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIF 390
K+WYL D ++ K AVL+ + ++ + +IPISLYVS+E+VK+ Q+++
Sbjct: 457 ----KQWYL---D----FEQKDVR-KAVLNLFSFMIAFAVMIPISLYVSLELVKVAQAVY 504
Query: 391 INQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGR 450
+ D+ MY ET+ PAR RTSNL+EELGQ++ I SDKTGTLT N M+F+KCS+ YG
Sbjct: 505 VGWDVKMYDPETNTPARTRTSNLSEELGQIEYIFSDKTGTLTRNQMDFLKCSVGKMVYGN 564
Query: 451 GVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMN--GSWVNEPHADVIQKF 508
E + + + G +E V + + F F+D RI+ N + +I +F
Sbjct: 565 VEREDDASSNKPYGIAMEGIVGADPK-------FGFKDRRIITHLDEDKNSEQSFLINEF 617
Query: 509 LRLLAICHTALPE-VDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 567
L LLA+CH+ +P+ ++++ +I YEA SPDEAA V AA+ LG+ FY R T V+
Sbjct: 618 LTLLAVCHSVVPDRPNKDDSEIIYEASSPDEAALVSAAKNLGYAFYNRDPTGCLVN---- 673
Query: 568 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 627
+ G K+ER + +LNVLEF+S RKRMSVI R+ +G ++L KGAD+ + L ++ E
Sbjct: 674 IRG-KIER-FEVLNVLEFNSDRKRMSVICRNPQGRIILYCKGADTTVLPLLRKDQEELYS 731
Query: 628 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXX 687
T E + ++A GLRTL LAY L+E++Y+Q+NE + EA S+ DR
Sbjct: 732 ITLEFLQDFAADGLRTLCLAYTYLEEEDYQQWNELYKEAAISIQ-DRDMKVDKVSELIER 790
Query: 688 XXXXXGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 747
G+TA+EDKLQ GVP+ I L +A IK+WVLTGDK ETAINIGF+C LL MR +
Sbjct: 791 NLSLIGSTAIEDKLQEGVPQAIANLIKANIKIWVLTGDKQETAINIGFSCHLLTSDMRII 850
Query: 748 IISSETPE 755
I++ E
Sbjct: 851 ILNGSNQE 858
|
|
| UNIPROTKB|E1BPC3 ATP8B1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 877 (313.8 bits), Expect = 6.3e-205, Sum P(3) = 6.3e-205
Identities = 205/514 (39%), Positives = 290/514 (56%)
Query: 55 YSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-LSPYSAVSNVLPLVVV 113
Y+ N ++T KY TF P LFEQF+R AN YFL+ IL P +S + + ++PL+VV
Sbjct: 92 YANNAIKTYKYNALTFLPMNLFEQFKRAANFYFLVLLILQAIPQISTLAWYTTLVPLLVV 151
Query: 114 IGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLXXXXXXXXXXXXFFPA 173
+G T K++++D R K D EVNNR +V +G F KW+D+ F PA
Sbjct: 152 LGVTAVKDLVDDVARHKMDKEVNNRTCEV-IKDGRFKVAKWKDIQVGDVIRLKKNDFIPA 210
Query: 174 DLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSN-MHEDSNFQNFKAIIRCEDPNA 232
D++LLSSS ++CYVET LDGETNLK K AL+ T + E+++ F I CE+PN
Sbjct: 211 DILLLSSSEPNSLCYVETAELDGETNLKFKMALEITHQYLQEENSLATFDGFIECEEPNN 270
Query: 233 NLYTFVGSXXXXXXXXXXXXXXXXXRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKR 292
L F G+ R +RNTD +G VIF G D+K+ +NS KR
Sbjct: 271 RLDKFTGTLFWKNTSFPLDADKILLRGCVIRNTDFCHGLVIFAGADSKIMKNSGKTRFKR 330
Query: 293 SKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRP-DDTTAYYDPK 351
+K++ M+ ++Y +F +L+L+S + G A E Q G WYL +D+T Y
Sbjct: 331 TKIDYLMNYMVYTIFVVLILLS--AGLAIGHAYWE-AQVGNFS-WYLYDGEDSTPSY--- 383
Query: 352 RAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTS 411
L+F +++ L+PISLYVS+E++++ QS FIN DL MYY E D PA+ART+
Sbjct: 384 ----RGFLNFWGYIIVLNTLVPISLYVSVEVIRLGQSYFINWDLQMYYPEKDTPAKARTT 439
Query: 412 NLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEV 471
LNE+LGQ+ I SDKTGTLT N M F KC I G YG + + + K P++
Sbjct: 440 TLNEQLGQIHYIFSDKTGTLTQNVMTFKKCCINGQIYGDHRDASQNSHS--KIEPVDFSW 497
Query: 472 TEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISY 531
+ K ++ E+I +G +P +Q+F LLA+CHT + D NG+++Y
Sbjct: 498 NAFADGKLEFYD-HYLIEQIQSGK---QPE---VQQFFFLLAMCHTVM--ADRLNGQLNY 548
Query: 532 EAESPDEAAFVIAARELGFEFYERTQTSISVHEL 565
+A SPDE A V AAR GF F RTQ +I++ EL
Sbjct: 549 QAASPDEGALVSAARNFGFVFLGRTQNTITISEL 582
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SX33 | ALA9_ARATH | 3, ., 6, ., 3, ., 1 | 0.7194 | 0.9814 | 0.9725 | yes | no |
| Q9LI83 | ALA10_ARATH | 3, ., 6, ., 3, ., 1 | 0.7147 | 0.9915 | 0.9808 | no | no |
| Q8TF62 | AT8B4_HUMAN | 3, ., 6, ., 3, ., 1 | 0.4131 | 0.9024 | 0.9001 | yes | no |
| P57792 | ALA12_ARATH | 3, ., 6, ., 3, ., 1 | 0.7018 | 0.9814 | 0.9856 | no | no |
| P70704 | AT8A1_MOUSE | 3, ., 6, ., 3, ., 1 | 0.4168 | 0.8687 | 0.8990 | yes | no |
| O94296 | YOOC_SCHPO | 3, ., 6, ., 3, ., 1 | 0.4014 | 0.8839 | 0.8354 | yes | no |
| Q9SAF5 | ALA11_ARATH | 3, ., 6, ., 3, ., 1 | 0.7068 | 0.9915 | 0.9800 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.XII.101.1 | aminophospholipid ATPase (1183 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1189 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-140 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-48 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 3e-29 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 9e-28 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 8e-18 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 2e-16 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 5e-13 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 7e-11 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-10 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 4e-07 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 5e-07 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 6e-07 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 5e-04 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 0.002 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 1426 bits (3692), Expect = 0.0
Identities = 546/1090 (50%), Positives = 732/1090 (67%), Gaps = 37/1090 (3%)
Query: 55 YSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-LSPYSAVSNVLPLVVV 113
+ N + TTKYT+ TF PK LFEQF+R AN+YFL+ A+L P LSP ++++PL V
Sbjct: 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60
Query: 114 IGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPA 173
+ T KE +ED RR+++D EVNNR +V G G F W+DL+VGD+VKV+KDE PA
Sbjct: 61 LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120
Query: 174 DLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNAN 233
DL+LLSSS + +CYVET NLDGETNLKL+QAL+ T M ++ + +NF I CE PNA+
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNAS 180
Query: 234 LYTFVGSLELEE-QQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKR 292
LY+F G++ + +QYPL+P +LLR LRNTD + G V++TG DTK+ +N+T PSKR
Sbjct: 181 LYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240
Query: 293 SKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKR 352
S++E+ ++ +I LF +L ++ I S+ GI +D WY+R D + +
Sbjct: 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKD----LWYIRLDVS-----ERN 291
Query: 353 AAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSN 412
AA FLT L+L+ LIPISLYVS+E+VK +Q+ FIN DL MY+E+TD PA RTSN
Sbjct: 292 AAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSN 351
Query: 413 LNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVT 472
LNEELGQV+ I SDKTGTLT N MEF KCSIAG SYG G TE++ + R GS +E E +
Sbjct: 352 LNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENS 411
Query: 473 EEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEV-DEENGKISY 531
E KGF F D R+++ N+P+A I +F LA+CHT +PE D+ +I+Y
Sbjct: 412 MLVE----SKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITY 467
Query: 532 EAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKR 591
+A SPDEAA V AAR++GF F+ERT SIS+ + G + Y +LNVLEF+S RKR
Sbjct: 468 QAASPDEAALVKAARDVGFVFFERTPKSISLLI--EMHG--ETKEYEILNVLEFNSDRKR 523
Query: 592 MSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYREL 651
MSVIVR+ +G + LL KGAD+V+F+RL+ G + E+TKEH+ YA GLRTL +AYREL
Sbjct: 524 MSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYREL 583
Query: 652 DEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDK 711
E+EY+++NEE+ EA ++ DREE + +AE IEK+LILLGATA+EDKLQ GVPE I+
Sbjct: 584 SEEEYEEWNEEYNEASTAL-TDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIEL 642
Query: 712 LAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAA 771
L QAGIK+WVLTGDK+ETAINIG++C LL + M Q++I+S++ ++ ++ K
Sbjct: 643 LRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRSVEAAIKFG---- 698
Query: 772 LKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC 831
L+ + L DS N +AL+IDGKSL YAL+++++ FL+LA+ C +VICC
Sbjct: 699 LEGTSEEFN----NLGDSGN-----VALVIDGKSLGYALDEELEKEFLQLALKCKAVICC 749
Query: 832 RSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAI 891
R SP QKA V RLVK T TTLAIGDGANDV M+QEAD+GVGISG EGMQAVM+SD AI
Sbjct: 750 RVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAI 809
Query: 892 AQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLS 951
QFRFL +LLLVHG W Y+RIS MI YFFYKN+ F F++ Y FSGQ +Y W++
Sbjct: 810 GQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMV 869
Query: 952 LYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAI 1011
LYNVFFT+LPVI+LGVFDQDVSA L++P LY+EG + FS GW L+G+ + +
Sbjct: 870 LYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLV 929
Query: 1012 IFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGG 1071
IFFF + A F G V +G ++T +V +VN ++AL + + +I + IWG
Sbjct: 930 IFFFPMFAYILGDFVSSGSVDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGS 989
Query: 1072 ITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMR 1131
I W IF++ Y + A+ FWL+ L++++ SLLP FTY AIQ
Sbjct: 990 ILVWLIFVIVYS---SIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRL 1046
Query: 1132 FFPLHHQMIQ 1141
F P + ++Q
Sbjct: 1047 FRPPDYDIVQ 1056
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 754 bits (1947), Expect = 0.0
Identities = 416/1123 (37%), Positives = 629/1123 (56%), Gaps = 73/1123 (6%)
Query: 37 SRVVHCNDP----ESFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAI 92
+R+V+ NDP E FE ++GN +RT KY++ +F P+ LFEQF RVA +YFL+ A+
Sbjct: 70 ARLVYLNDPEKSNERFE-----FAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAV 124
Query: 93 LSFTP-LSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDY 151
L+ P L+ + +++LPL V+ T K+ EDWRR + D NNR V + F
Sbjct: 125 LNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWV-LVDDQFQE 183
Query: 152 TKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDAT-S 210
KW+D++VG+++K++ ++ P D++LLS+S + YV+T NLDGE+NLK + A T S
Sbjct: 184 KKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLS 243
Query: 211 NMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYG 270
+ E + +I+CE PN N+Y F ++E++ ++ L P ++LR +L+NT G
Sbjct: 244 KIPEK---EKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIG 300
Query: 271 AVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQ 330
++ GR+TK N++G PSKRS++E RM+ I L L+ + I S+ + R
Sbjct: 301 VAVYCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRD 360
Query: 331 DGKMKRWYLRPD------DTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVK 384
+ +Y R D YY FL +++++ +IPISLY+S+E+V+
Sbjct: 361 ELDTIPFYRRKDFSEGGPKNYNYYG---WGWEIFFTFLMSVIVFQIMIPISLYISMELVR 417
Query: 385 ILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIA 444
+ Q+ F+ +D MY E ++ + R N+NE+LGQ+ + SDKTGTLT N MEF SI
Sbjct: 418 VGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477
Query: 445 GTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADV 504
G Y G T + A ++ ++ K +K + + + E A
Sbjct: 478 GVDYSDGRTPTQNDHAGYSVE-VDGKILRP---KMKVK-VDPQLLELSKSGKDTE-EAKH 531
Query: 505 IQKFLRLLAICHTALPEVDEENGK-----ISYEAESPDEAAFVIAARELGFEFYERTQTS 559
+ F LA C+T +P V ++ + Y+ ESPDE A V AA GF ERT
Sbjct: 532 VHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERT--- 588
Query: 560 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLA 619
S H + + G + + +++L + EF S RKRMSVI+ + T+ + KGAD+ MF +
Sbjct: 589 -SGHIVIDIHGER--QRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVID 645
Query: 620 EN-GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELA 678
+ T+ H++ Y+ GLRTL++ REL++ E++Q++ F EA ++ R L
Sbjct: 646 RSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSF-EAASTALIGRAALL 704
Query: 679 EEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACS 738
++A +E NL +LGA+A+EDKLQ GVPE I+ L AGIK+WVLTGDK ETAI+IG++
Sbjct: 705 RKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSK 764
Query: 739 LLRQGMRQVIISSETPES--KTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGP 796
LL M Q+II+S + ES K+LE A + K + + + + SS + P
Sbjct: 765 LLTNKMTQIIINSNSKESCRKSLE-----DALVMSKKLTTVSGISQNTGG--SSAAASDP 817
Query: 797 LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 856
+ALIIDG SL Y L+ ++++ +LA C+ V+CCR +P QKA + LVK +TS TLAI
Sbjct: 818 VALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877
Query: 857 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMI 916
GDGANDV M+Q AD+GVGISG EG QAVM+SD A+ QFRFL LLLVHGHW Y+R+ MI
Sbjct: 878 GDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMI 937
Query: 917 CYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARF 976
Y FY+N F LF++ + F+ N+W LY+V +T+LP I +G+ D+D+S R
Sbjct: 938 LYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRT 997
Query: 977 CLKFPLLY-----QEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEV 1031
LK+P LY QE + LF T I + + +A++FF + F
Sbjct: 998 LLKYPQLYGAGQRQEAYNSKLFWLTMI-----DTLWQSAVVFFVPL-------FAYWAST 1045
Query: 1032 IGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYIST 1091
I +G VV +VN +A+ + + +I H IWG I +I ++ +D +
Sbjct: 1046 IDGSSIGDLWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVI---VIDAIPTL 1102
Query: 1092 TAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFP 1134
Y A SFWL L +++++LLP F + F P
Sbjct: 1103 PGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTP 1144
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 446 bits (1149), Expect = e-140
Identities = 250/1107 (22%), Positives = 387/1107 (34%), Gaps = 263/1107 (23%)
Query: 49 EASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSF---TPLSPYSAVS 105
E + + K L + + L+ A+LS +
Sbjct: 49 EVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIIL-LLVAALLSAFVGDWVDAGVDAI 107
Query: 106 NVLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKV 165
+L +VV+ + + + ++++ K KV +G F +L GD+V +
Sbjct: 108 VILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVL-RDGKFVEIPASELVPGDIVLL 166
Query: 166 EKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAII 225
E + PADL LL SS V+ + L GE+ KQAL
Sbjct: 167 EAGDVVPADLRLLESSDL----EVDESALTGESLPVEKQALP------------------ 204
Query: 226 RCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNS 285
L + L +L + + + G V+ TG +T+ + +
Sbjct: 205 ---------------LTKSDAPLGLDRDNMLFSGTTVVSGRAK-GIVVATGFETEFGKIA 248
Query: 286 TGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTT 345
P+K+ K+ +LVL +G++ F + +
Sbjct: 249 RLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGL-----------FRGGNGLLE 297
Query: 346 AYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKP 405
+ FLTAL L +P L + I L + + +D +
Sbjct: 298 S--------------FLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIV------- 336
Query: 406 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGS 465
R+ N E LG VD I SDKTGTLT N M K I G
Sbjct: 337 ---RSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGG------------------ 375
Query: 466 PLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEE 525
+ D +K FL A+C++ PE +
Sbjct: 376 --------KDIDDKDLKDSPALLR------------------FLLAAALCNSVTPEKNGW 409
Query: 526 NGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEF 585
Y+A P E A V A +LGF +E Y +L + F
Sbjct: 410 -----YQAGDPTEGALVEFAEKLGFSLDLS----------------GLEVEYPILAEIPF 448
Query: 586 SSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFE------EQTKEHINEYADA 639
S RKRMSVIV+++EG +L KGA V+ ER G +E + E A
Sbjct: 449 DSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASE 508
Query: 640 GLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVED 699
GLR L +AY++LD E ++ ++IE +L+ LG T +ED
Sbjct: 509 GLRVLAVAYKKLDRAE----------------------KDDEVDEIESDLVFLGLTGIED 546
Query: 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTL 759
+ V E I++L +AGIK+W++TGD +ETAI I C + +
Sbjct: 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE--------------- 591
Query: 760 EKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFL 819
AL+IDG L ++++ +L
Sbjct: 592 -------------------------------------SALVIDGAELDALSDEELAELVE 614
Query: 820 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 879
EL++ R SP+QKA + ++ K+ GDG ND L+ AD+G+ + G E
Sbjct: 615 ELSV------FARVSPEQKARIVEALQ-KSGHVVAMTGDGVNDAPALKAADVGIAMGG-E 666
Query: 880 GMQAVMSSD--IAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYA 937
G A + + + L +V G Y I I Y KN+ TL
Sbjct: 667 GTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLI--YSL 724
Query: 938 SFSGQPVYNDWFLSLYNVFFTSLPVIALGVFD--QDVSARFCLKFPLLYQEGVQNILFSW 995
L N+ SLP +ALGV D DV +K P G + LF+
Sbjct: 725 FNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDV-----MKRP---PRGPEEGLFNR 776
Query: 996 TRILGWALNGVANAAIIFF--FCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVW--VVNC 1051
+ L +AI+F F ++ + A G + +L TT +T +V ++
Sbjct: 777 KIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGL-DLFQALLQTTAFTVLVLIQLLLT 835
Query: 1052 QMALSVTYFTYIQHLF----IWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSF 1107
S LF +W + I L ++ K+F P F
Sbjct: 836 LAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLI----IFLPPLNLKIFQ--PTPLSLF 889
Query: 1108 -WLITLLVLMSSLLPYFTYSAIQMRFF 1133
WLI + V + LL Y S +
Sbjct: 890 EWLIAIAV--ALLLLYIVVSELYKLKS 914
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 182 bits (463), Expect = 1e-48
Identities = 91/388 (23%), Positives = 139/388 (35%), Gaps = 77/388 (19%)
Query: 104 VSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVV 163
L LV V+ K ED R D VN R V + +DL GDVV
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVL--RNGWKEIPAKDLVPGDVV 58
Query: 164 KVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKA 223
V+ E PAD +LLS S C+V+ +NL GE+N LK AL T +
Sbjct: 59 LVKSGETVPADGVLLSGS-----CFVDESNLTGESNPVLKTALKETQS-----------G 102
Query: 224 IIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ 283
I + A Y F G+L + + + + T V+ TG +T+
Sbjct: 103 TITGDLVFAGTYVFGGTLIVV------------VTPTGILTTVGRIAVVVKTGFETR--- 147
Query: 284 NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDD 343
+ R++ I+ LF +L+ ++ +F + +
Sbjct: 148 ------TPLQSKRDRLENFIFILFLLLLALAVFLYLFIRGWD-----PNSIFKA------ 190
Query: 344 TTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETD 403
L AL++ ++P +L ++ + D +
Sbjct: 191 -----------------LLRALIVLVIVVPPALPAAVTVAL------AVGDARLA----K 223
Query: 404 KPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRK 463
K R N EELG+VD + SDKTGTLT N M I G + V
Sbjct: 224 KGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSSLVACDNNYLS 283
Query: 464 GSPLEEEVTEEQEDKASIKGFNFEDERI 491
G P+E+ + + E N E + +
Sbjct: 284 GDPMEKALLKSAELVGKADKGNKEYKIL 311
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 3e-29
Identities = 108/470 (22%), Positives = 176/470 (37%), Gaps = 91/470 (19%)
Query: 418 GQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQED 477
G++D DKTGTLT + ++ RGV + K + E +
Sbjct: 446 GKIDVCCFDKTGTLTEDGLDL-----------RGVQGLSGNQEFLK---IVTEDSSL--- 488
Query: 478 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537
+ LA CH +L ++ GK+ +
Sbjct: 489 --------------------------KPSITHKALATCH-SLTKL---EGKLVGDPLDKK 518
Query: 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 597
E E E T V DP + S++ +FSS+ +RMSVIV
Sbjct: 519 MFEATGWTLEEDDESAEPTSILAVVRTDDP------PQELSIIRRFQFSSALQRMSVIVS 572
Query: 598 -SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEY 656
++E + KGA + + +E + Y G R L LAY+EL +
Sbjct: 573 TNDERSPDAFVKGAPETIQSLC--SPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTL 630
Query: 657 KQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG 716
++ + R+ + E NL LG E+ L+ E I +L +A
Sbjct: 631 QKAQD----------LSRDAV--------ESNLTFLGFIVFENPLKPDTKEVIKELKRAS 672
Query: 717 IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES------KTLEKSEDKSAAAA 770
I+ ++TGD TA+++ C ++ ++ +E PES K A+
Sbjct: 673 IRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFAST- 731
Query: 771 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVIC 830
V G++ ++ S LA + GK+ L+ +L L L +
Sbjct: 732 ----QVEIPYPLGQDSVEDLLASRYHLA--MSGKAF-AVLQAHSPELLLRLLSHTT--VF 782
Query: 831 CRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 880
R +P QK + L++ K T GDGAND G L++AD+G+ +S E
Sbjct: 783 ARMAPDQKETLVELLQ-KLDYTVGMCGDGANDCGALKQADVGISLSEAEA 831
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 9e-28
Identities = 56/216 (25%), Positives = 81/216 (37%), Gaps = 61/216 (28%)
Query: 524 EENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVL 583
+Y + P E A + +A +G + Y +L+V
Sbjct: 274 LVACDNNYLSGDPMEKALLKSAELVGKADKGNKE-------------------YKILDVF 314
Query: 584 EFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRT 643
FSS KRMSVIV + +G+ LL KGA + ER +E E A GLR
Sbjct: 315 PFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERC--------NNYEEKYLELARQGLRV 366
Query: 644 LILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQN 703
L A +EL++ +L LG ED L+
Sbjct: 367 LAFASKELED----------------------------------DLEFLGLITFEDPLRP 392
Query: 704 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739
E I++L AGIK+ ++TGD + TA I +
Sbjct: 393 DAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGI 428
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 89.1 bits (221), Expect = 8e-18
Identities = 125/527 (23%), Positives = 189/527 (35%), Gaps = 123/527 (23%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 474
E LG I SDKTGTLT N M K S + E
Sbjct: 284 ETLGCTTVICSDKTGTLTTNQMSVCKVVALDPS--------------------SSSLNEF 323
Query: 475 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
+ + E I + V +++ + A+C+ + +D K YE
Sbjct: 324 CVTGTT---YAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDS--SLDFNERKGVYEKV 378
Query: 535 S-PDEAAFVIAARELGFEFYERTQTSISVHELD--PVTGTKVERSYSLLNVLEFSSSRKR 591
EAA + ++G + +S L V K ++ L LEFS RK
Sbjct: 379 GEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKK----LATLEFSRDRKS 434
Query: 592 MSVIVRSEEGTLLLLSKGADSVMFER----LAENGR------EFEEQTKEHINEYADA-G 640
MSV+ + G L KGA + ER L +GR + + I E
Sbjct: 435 MSVLCKPSTGNKLF-VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKA 493
Query: 641 LRTLILAYRE-LDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVED 699
LR L LA+++ D +E + A A IE +L +G + D
Sbjct: 494 LRCLALAFKDIPDPREED---------------LLSDPANFEA--IESDLTFIGVVGMLD 536
Query: 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTL 759
+ V + I+K AGI++ ++TGD ETA I C R++ I S
Sbjct: 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAI---C-------RRIGIFSPD------ 580
Query: 760 EKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFL 819
E KS G+E + +GP
Sbjct: 581 EDVTFKS--------------FTGREF-----DEMGPAK--------------------- 600
Query: 820 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI-SGV 878
+ A ++V+ R P K+ + L++ + + GDG ND L++ADIG+ + SG
Sbjct: 601 QRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMT-GDGVNDAPALKKADIGIAMGSGT 659
Query: 879 EGMQAVMSSDIAIAQFRFLERLLLVH-GHWCYRRISSMICYFFYKNI 924
E A +SD+ +A F + V G Y + I Y NI
Sbjct: 660 E--VAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNI 704
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 84.1 bits (208), Expect = 2e-16
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 37/201 (18%)
Query: 573 VERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVM----FERLAENG--REFE 626
V ++ + F+S RK MSV+V+ G KGA ++ +RL NG
Sbjct: 468 VRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPIS 527
Query: 627 EQ----TKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIA 682
+ + I A LRT+ LAYR+ +E R++
Sbjct: 528 DDDKDRCADVIEPLASDALRTICLAYRDFAPEE----------------FPRKDYPN--- 568
Query: 683 EKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 742
K L L+G ++D L+ GV E + + +AGI + ++TGD ++TA I C +L
Sbjct: 569 ----KGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF 624
Query: 743 GMRQVIISSETPESKTLEKSE 763
G ++ E E ++L E
Sbjct: 625 G----GLAMEGKEFRSLVYEE 641
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 5e-13
Identities = 164/835 (19%), Positives = 285/835 (34%), Gaps = 276/835 (33%)
Query: 73 KALFEQFRRVANVYFLI-CAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQ 131
K QF + + LI A++S + AVS L +++V+ +E R ++
Sbjct: 52 KKFLSQFVKNPLILLLIASAVISVFMGNIDDAVSITLAILIVVTVGFVQEY-----RSEK 106
Query: 132 DIEVNNRKVKVHCG---EGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAI-C 187
+E N+ V C EG ++ L GD+V + + PADL ++ EA+
Sbjct: 107 SLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIV-----EAVDL 161
Query: 188 YVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQ 247
++ +NL GE T+ + + + + + F+G+L
Sbjct: 162 SIDESNLTGE-----------TTPVSKVTAPIPAATNGDLAERSN--IAFMGTL------ 202
Query: 248 YPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKI-- 302
+R + G V+ TG +T VF+ ++ +++ MD +
Sbjct: 203 ---------VRCGHGK------GIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGK 247
Query: 303 --IYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
FG++ ++ +G F G E AVAA+
Sbjct: 248 QLSLVSFGVIGVICLVG-WFQGKDWLEMFTISV------------------SLAVAAIPE 288
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
L PI IV + ++ + L M + K A R E LG V
Sbjct: 289 GL----------PI-------IVTVTLALGV---LRM----SKKRAIVRKLPSVETLGSV 324
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 480
+ I SDKTGTLT N M K + +
Sbjct: 325 NVICSDKTGTLTKNHMTVTKIWTSDG----------------------------LHTMLN 356
Query: 481 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAES----P 536
N E I++G ++ + + + L +C+ N K EA++ P
Sbjct: 357 AVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCN---------NAKFRNEADTLLGNP 407
Query: 537 DEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV-I 595
+ A + + G + + +T I V E+ FSS RK M+V
Sbjct: 408 TDVALIELLMKFGLD--DLRETYIRVAEV------------------PFSSERKWMAVKC 447
Query: 596 VRSEEGTLLLLSKGADSVMFERLAE--------NGR--EFEEQTKEHINE----YADAGL 641
V ++ + + KGA +E++ + +G+ +Q ++ I E A AGL
Sbjct: 448 VHRQDRSEMCFMKGA----YEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGL 503
Query: 642 RTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKN-LILLGATAVEDK 700
R + A EK L LG + D
Sbjct: 504 RVIAFAS-----------------------------------GPEKGQLTFLGLVGINDP 528
Query: 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLE 760
+ GV E + L G+++ ++TGD ETA++I R++ + S+T +S +
Sbjct: 529 PRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA----------RRLGMPSKTSQSVS-- 576
Query: 761 KSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLE 820
G++L ++ L +
Sbjct: 577 ----------------------GEKLDAMDDQQL-----------------SQIVP---- 593
Query: 821 LAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI 875
+ R+SP+ K + + ++ K GDG ND L+ ADIGV +
Sbjct: 594 -----KVAVFARASPEHKMKIVKALQ-KRGDVVAMTGDGVNDAPALKLADIGVAM 642
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 7e-11
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 22/107 (20%)
Query: 513 AICHTALPEVDEENGKISYEAE-SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGT 571
A+C+ A + E K E P E+A ++ A +LG I V EL
Sbjct: 1 ALCNDA--KFGENEEKNGGEIIGDPTESALLVFAEKLG----------IDVEEL------ 42
Query: 572 KVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGADSVMFER 617
Y + + F+S RKRMS + + E + L KGA + ER
Sbjct: 43 --RARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 65.8 bits (160), Expect = 1e-10
Identities = 131/596 (21%), Positives = 210/596 (35%), Gaps = 127/596 (21%)
Query: 415 EELGQVDTILSDKTGTLTCNSM--------EFIKCSIAGTSYGRGVTEVERAMARRKGSP 466
E LG V+ I SDKTGT+T M F SI + E + R SP
Sbjct: 354 EALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRF-SP 412
Query: 467 LEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEEN 526
E E D+ +K F + + + D+ K L A+ + A D+
Sbjct: 413 YEYSHNEAA-DQDILKEFK---DELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDAT 468
Query: 527 GKISYEAESPDEAAFVIAARELGFEFY------------ERTQTSISVHELDPVTGTKVE 574
+ P E A + A++ E Q+S+S H P +
Sbjct: 469 DCWKAHGD-PTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSA---- 523
Query: 575 RSYSLLNVLEFSSSRKRMSVIVRSEEG-TLLLLSKGADSVMFERLAE-NGREFEEQT--- 629
+ + F S KRM+ I G T + +KGA + E + NG++ + +
Sbjct: 524 -QFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLE 582
Query: 630 -------KEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIA 682
++ A GLR L A + D+ + N E L A
Sbjct: 583 DCDRELIIANMESLAAEGLRVLAFASKSFDKAD-----------NNDDQLKNETLNRATA 631
Query: 683 EKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 742
E +L LG + D +N ++K QAGI + +LTGD ETA I ++
Sbjct: 632 ES---DLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPP 688
Query: 743 GM---RQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 799
R I+ S ++ G + S+E +
Sbjct: 689 NFIHDRDEIMDS---------------------------MVMTGSQFDALSDEEV----- 716
Query: 800 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859
DD+K L L +A R +P+ K + + + + + GDG
Sbjct: 717 ------------DDLKALCLVIA---------RCAPQTKVKMIEALHRRKAFCAMT-GDG 754
Query: 860 ANDVGMLQEADIGVGISGVEGMQ-AVMSSDIAIAQFRFLERLLLV-HGHWCYRRISSMIC 917
ND L+ A++G+ + G+ G A +SDI ++ F L + G + I +
Sbjct: 755 VNDSPSLKMANVGIAM-GINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVL 813
Query: 918 YFFYKNIAFGFTL-----FFFEAYAS-FSGQPVYNDWFLSLYNVFFTSLPVIALGV 967
+ +N+A L F E S F PV W + + P + LG+
Sbjct: 814 HLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWC----IMITSCFPAMGLGL 865
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 4e-07
Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 25/147 (17%)
Query: 820 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 879
+A + R SP+QK + ++ K GDG ND L++AD+G+ +
Sbjct: 421 AIAKELGIDVFARVSPEQKLQIVEALQ-KKGHIVAMTGDGVNDAPALKKADVGIAMG--- 476
Query: 880 GMQAVMSSDIAIAQFRFLERLLLV-HGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYAS 938
A ++DI + + V G + I S I + IA+ L
Sbjct: 477 ---AKAAADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFW----AIAYNLILIPLAL--- 526
Query: 939 FSGQPVYNDWFLSLYNVFFTSLPVIAL 965
L + + L +AL
Sbjct: 527 ----------LLIVIILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 5e-07
Identities = 74/294 (25%), Positives = 122/294 (41%), Gaps = 79/294 (26%)
Query: 604 LLLSKGADSVMFERLAE---NGRE--FEEQTKEHIN----EYADAGLRTLILAYRELDEK 654
LL+ KGA + ER + +G+E +E+ KE E G R L + L ++
Sbjct: 478 LLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDE 537
Query: 655 EYK---QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDK 711
++ QF+ T+ N + NL +G ++ D + VP+ + K
Sbjct: 538 QFPEGFQFD---TDDVNFPT---------------DNLCFVGLISMIDPPRAAVPDAVGK 579
Query: 712 LAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT------LEKSEDK 765
AGIK+ ++TGD TA I ++ +G +ET E + + +
Sbjct: 580 CRSAGIKVIMVTGDHPITAKAIAKGVGIISEG-------NETVEDIAARLNIPVSQVNPR 632
Query: 766 SAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGC 825
A KA V+H G +L D ++E L + L Y E
Sbjct: 633 DA-----KACVVH----GSDLKDMTSEQLD--------EILKYHTE-------------- 661
Query: 826 ASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGV--GISG 877
++ R+SP+QK ++ + + + GDG ND L++ADIGV GI+G
Sbjct: 662 --IVFARTSPQQKLIIVEGCQ-RQGAIVAVTGDGVNDSPALKKADIGVAMGIAG 712
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 6e-07
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 30/160 (18%)
Query: 575 RSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFE---RLAENG--REFEEQT 629
Y ++ L F R+R+SV+V +G LL+ KGA M + + R +E
Sbjct: 437 AGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEAR 496
Query: 630 KEHI----NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKI 685
+E + Y G R L++A RE+ E++ S
Sbjct: 497 RERLLALAEAYNADGFRVLLVATREIPG----------GESRAQYSTAD----------- 535
Query: 686 EKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD 725
E++L++ G D + I L + G+ + VLTGD
Sbjct: 536 ERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 5e-04
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 637 ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIE-KNLILLGAT 695
A G+ +I A L ++ ++ + EEL A + +L++LG
Sbjct: 30 AALGVAIVIAAGENLTKEGREELVRRLLLRALAGEELLEELLRAGATVVAVLDLVVLGLI 89
Query: 696 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE 755
A+ D L G E + +L +AGIKL +LTGD TA I G+ ++S++
Sbjct: 90 ALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAI-----ARLLGLFDALVSADLYG 144
Query: 756 SKTLEKSEDKSAAAAA 771
+ K + K A
Sbjct: 145 LVGVGKPDPKIFELAL 160
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 0.002
Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 36/152 (23%)
Query: 585 FSSSRKRMSVIVRSEEGTLLLLSKGADSVMFE---RLAENGR------EFEEQTKEHINE 635
F R+RMSV+V L+ KGA + ++ NG + K +
Sbjct: 449 FDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDT 508
Query: 636 YADAGLRTLILAYREL--DEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLG 693
GLR + +A + L E +Y++ AD E +LIL G
Sbjct: 509 LNRQGLRVVAVATKYLPAREGDYQR-------------AD------------ESDLILEG 543
Query: 694 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD 725
A D + + L +G+ + +LTGD
Sbjct: 544 YIAFLDPPKETTAPALKALKASGVTVKILTGD 575
|
Length = 902 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1189 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.96 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.86 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.46 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.45 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.27 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.12 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.82 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.77 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.77 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.73 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.65 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.65 | |
| PLN02887 | 580 | hydrolase family protein | 98.64 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.63 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.61 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.59 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.56 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.53 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.5 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.45 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.41 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.38 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.38 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.25 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.2 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.18 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.17 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.14 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.12 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.12 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.06 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.05 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.05 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.01 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.99 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.95 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.95 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.93 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.87 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.86 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.85 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.84 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.83 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.79 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.67 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.65 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.61 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.56 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.49 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.49 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.37 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.29 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.25 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.22 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.94 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.92 | |
| PLN02423 | 245 | phosphomannomutase | 96.89 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.85 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 96.82 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.8 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.77 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.7 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 96.65 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.52 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.52 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.52 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.45 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 96.38 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.34 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 96.26 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.25 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.09 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.07 | |
| PLN03017 | 366 | trehalose-phosphatase | 95.98 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 95.96 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 95.93 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 95.88 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.79 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.69 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 95.66 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 95.6 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.46 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 95.32 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 95.32 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.25 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.04 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.0 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 94.91 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 94.88 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 94.62 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.5 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 94.46 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 94.46 | |
| PLN02811 | 220 | hydrolase | 94.3 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.19 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 94.05 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 94.03 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 93.86 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 93.79 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 93.6 | |
| PLN02151 | 354 | trehalose-phosphatase | 93.6 | |
| PLN02940 | 382 | riboflavin kinase | 93.56 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 93.42 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 93.31 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 92.64 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.4 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 92.27 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 92.22 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 92.22 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.17 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 92.0 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 91.54 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 91.09 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 90.94 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 89.18 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 89.15 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 88.81 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 88.73 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 87.81 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 87.48 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 87.46 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 86.54 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 86.33 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 85.63 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 84.53 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 84.15 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 82.62 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 82.26 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 81.82 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 81.73 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 81.12 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-200 Score=1819.38 Aligned_cols=1083 Identities=61% Similarity=0.999 Sum_probs=985.8
Q ss_pred CCCcceEEEeCCCcchhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccchhhhhh
Q 001017 33 GPGFSRVVHCNDPESFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVV 112 (1189)
Q Consensus 33 ~~~~~r~~~~n~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~~~~~~~~~~~~l~~ 112 (1189)
.++.+|++++|++..++.+..+|+.|+|+|+||++++|+|++||+||+|++|+|||+++||+++|++|++++++++||++
T Consensus 10 ~~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~ 89 (1151)
T KOG0206|consen 10 RPGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLF 89 (1151)
T ss_pred cCCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceee
Confidence 44668999999996555556689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHhhhhHHHhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEec
Q 001017 113 VIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETT 192 (1189)
Q Consensus 113 vl~~s~i~~~~~d~~~~~~~~~~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s 192 (1189)
|+.++++||++||++|+++|+++|+++++|+++++.+++..|++|+|||+|++..+|.+|||++||++++++|+|||+|+
T Consensus 90 vl~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~ 169 (1151)
T KOG0206|consen 90 VLGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETA 169 (1151)
T ss_pred eehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEe
Confidence 99999999999999999999999999999993334499999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEE
Q 001017 193 NLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAV 272 (1189)
Q Consensus 193 ~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvV 272 (1189)
|||||||+|.|++...+......+....+++.|+||.||+++|.|.|++..+++..|++++|+++|||+|+||+|++|+|
T Consensus 170 nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~v 249 (1151)
T KOG0206|consen 170 NLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVV 249 (1151)
T ss_pred ecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEE
Confidence 99999999999998888664456667889999999999999999999999888777999999999999999999999999
Q ss_pred EEeccccceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchh
Q 001017 273 IFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKR 352 (1189)
Q Consensus 273 v~tG~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (1189)
++||+|||+|+|+..++.|++++++.+|+.+..++++++++|+++++..++|......... ..||+..+.
T Consensus 250 v~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~--------- 319 (1151)
T KOG0206|consen 250 VFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNG-EWWYLSPSE--------- 319 (1151)
T ss_pred EEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccC-chhhhcCch---------
Confidence 9999999999999999999999999999999999999999999999999998874322110 356665431
Q ss_pred hHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCcccc
Q 001017 353 AAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (1189)
Q Consensus 353 ~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT 432 (1189)
.....+..|+++++++..++|+|||+++|+++++|+.++++|.+||+++.+.++.+|+++++|+||||+||++|||||||
T Consensus 320 ~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT 399 (1151)
T KOG0206|consen 320 AAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLT 399 (1151)
T ss_pred HHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccc
Confidence 44567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHH
Q 001017 433 CNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 512 (1189)
Q Consensus 433 ~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 512 (1189)
+|.|+|++|+++|..|+...++.+....++++.. . .....+++.|.|+++.++.+.+.+++..+++|++++
T Consensus 400 ~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~l 470 (1151)
T KOG0206|consen 400 QNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGD-------V--NEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRAL 470 (1151)
T ss_pred cceeeeecccccCcccccCCChhhcccCcccccc-------c--cccccccceeccchhhccccccccCcchHHHHhhHH
Confidence 9999999999999999987765433332221111 0 113356788999999999888888899999999999
Q ss_pred hhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceE
Q 001017 513 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRM 592 (1189)
Q Consensus 513 alC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 592 (1189)
|+||++.++.+++.+.+.|+++||||.|+|++|+++|+.+..|+++.+.+...+ ..++|++|+++||+|+||||
T Consensus 471 a~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g------~~~~y~lL~iLeF~S~RKRM 544 (1151)
T KOG0206|consen 471 ALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELG------VEETYELLNVLEFNSTRKRM 544 (1151)
T ss_pred hccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccc------cceeEEEEEEecccccccee
Confidence 999999999976666899999999999999999999999999999999998554 34899999999999999999
Q ss_pred EEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhh
Q 001017 593 SVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSA 672 (1189)
Q Consensus 593 sviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~ 672 (1189)
|||||+|+|+++|||||||++|++++..++....+.+.+|+++||.+||||||+|||+++++||.+|+++|.+|++++ .
T Consensus 545 SVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~-~ 623 (1151)
T KOG0206|consen 545 SVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSL-T 623 (1151)
T ss_pred EEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhc-c
Confidence 999999999999999999999999999888899999999999999999999999999999999999999999999999 6
Q ss_pred cHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCC
Q 001017 673 DREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE 752 (1189)
Q Consensus 673 ~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~ 752 (1189)
||+++++++++.+|+||+++|+|||||+||+|||++|+.|++||||+|||||||+|||++||.+|+++++++..+.++..
T Consensus 624 ~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~ 703 (1151)
T KOG0206|consen 624 DREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTE 703 (1151)
T ss_pred CHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEe
Q 001017 753 TPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR 832 (1189)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r 832 (1189)
+.+.....+. .. ...+.+..+.............. ...+++|||+++.++++++.+..|..++..|++|+|||
T Consensus 704 ~~~~~~~~~~-----~~-~~~~~l~~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR 776 (1151)
T KOG0206|consen 704 TSEELSSLDA-----TA-ALKETLLRKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCR 776 (1151)
T ss_pred Chhhhcchhh-----HH-HHHHHHHHhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEcc
Confidence 6541111111 11 22233333332222221111111 47899999999999999988899999999999999999
Q ss_pred CCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchhhHHHHHHhhhhhhhhh
Q 001017 833 SSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRI 912 (1189)
Q Consensus 833 ~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~l~~lll~~GR~~~~~i 912 (1189)
+||.||+.+|+++++..+.+|+|||||+||++|||+|||||||+|.||+||+++|||+|.+|++|.+|||+||||+|.|+
T Consensus 777 ~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~ 856 (1151)
T KOG0206|consen 777 VSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRL 856 (1151)
T ss_pred CCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHH
Confidence 99999999999999778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhccccccc
Q 001017 913 SSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNIL 992 (1189)
Q Consensus 913 ~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~ 992 (1189)
+++++|+||||+.+++++|||.+++|||||++|++|++.+||++||++|++++|++|+|++++.++++|+||+.++++..
T Consensus 857 a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~ 936 (1151)
T KOG0206|consen 857 AKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLL 936 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHhhccccccCCCceeehhhhhhHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHH
Q 001017 993 FSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGI 1072 (1189)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~n~~~~l~~~~~t~~~~~~i~~si 1072 (1189)
|+++.|+.|++.|++|++++||+++..+....+..+|++.+.+.+|+.+||++|+++|+++++++++|||++|+.+|+|+
T Consensus 937 f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~i~gSi 1016 (1151)
T KOG0206|consen 937 FNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWTWINHIVIWGSI 1016 (1151)
T ss_pred cchHHHHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehheeHHHHHHHHHHH
Confidence 99999999999999999999999999887667778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCccccc-hhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCC
Q 001017 1073 TFWYIFLLAYGAMDPYIST-TAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQ 1148 (1189)
Q Consensus 1073 ~~~~i~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~~~P~~~~i~~e~~~~~~ 1148 (1189)
++||++.+++...++.+.. ..+.+++..+..+|.||++++++++++++|+++++++++.++|++++++||+++..+
T Consensus 1017 ~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~~~~ 1093 (1151)
T KOG0206|consen 1017 LLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEKYRR 1093 (1151)
T ss_pred HHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHhccc
Confidence 9999999999863333333 555568888899999999999999999999999999999999999999999997544
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-181 Score=1723.63 Aligned_cols=1078 Identities=37% Similarity=0.624 Sum_probs=918.6
Q ss_pred CcceEEEeCCCcchhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcccc-CCCCCCccchhhhhhH
Q 001017 35 GFSRVVHCNDPESFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-LSPYSAVSNVLPLVVV 113 (1189)
Q Consensus 35 ~~~r~~~~n~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~-~~~~~~~~~~~~l~~v 113 (1189)
...|.|++|++... +...+|++|.|+|+||++|+|+|++||+||+|++|+|||+++|+|++| +++.+++++++||+++
T Consensus 68 ~~~r~i~~~~~~~~-~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~v 146 (1178)
T PLN03190 68 EDARLVYLNDPEKS-NERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFV 146 (1178)
T ss_pred CCceEEEcCCCCcc-cccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHH
Confidence 45799999988432 223479999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHhhHHHHHHHHHhhhhHHHhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecC
Q 001017 114 IGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTN 193 (1189)
Q Consensus 114 l~~s~i~~~~~d~~~~~~~~~~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~ 193 (1189)
++++++++++||++|+++|+++|++.++|+ ++|.+++++|++|+|||||+|++||.+|||+++|++++++|.|+|||++
T Consensus 147 l~v~~ike~~Ed~~r~k~d~~~N~~~~~v~-~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~ 225 (1178)
T PLN03190 147 LLVTAVKDAYEDWRRHRSDRIENNRLAWVL-VDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTIN 225 (1178)
T ss_pred HHHHHHHHHHHHHHHHHhHHhhcCcEEEEE-ECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccc
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEE
Q 001017 194 LDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVI 273 (1189)
Q Consensus 194 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv 273 (1189)
|||||+||.|.+++.+... ..+..+++|.|+||.||+++|.|.|++.++|+..|++.+|+++|||.|+||+|++|+|+
T Consensus 226 LdGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVV 303 (1178)
T PLN03190 226 LDGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAV 303 (1178)
T ss_pred cCCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEE
Confidence 9999999999988765321 12335678999999999999999999999999999999999999999999999999999
Q ss_pred EeccccceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCC---CccCc
Q 001017 274 FTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTT---AYYDP 350 (1189)
Q Consensus 274 ~tG~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 350 (1189)
|||+|||+++|...++.|+|++|+.+|+++.+++++++++|++++++..+|......+..+-.||+..+... ..++.
T Consensus 304 YTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 383 (1178)
T PLN03190 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNY 383 (1178)
T ss_pred EechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999888777643222211123443221100 00111
Q ss_pred hhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCcc
Q 001017 351 KRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGT 430 (1189)
Q Consensus 351 ~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGT 430 (1189)
.......+..|+++++++..+||+||++++++++++|+++|++|.+||+++.+.++.||+++++|+||+|+|||+|||||
T Consensus 384 ~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGT 463 (1178)
T PLN03190 384 YGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGT 463 (1178)
T ss_pred chhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCc
Confidence 11113446678889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCC-cCChhhhcCCC--CCCCchHHHHH
Q 001017 431 LTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFN-FEDERIMNGSW--VNEPHADVIQK 507 (1189)
Q Consensus 431 LT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~--~~~~~~~~~~~ 507 (1189)
||+|+|+|++|+++|..|+.+....+.... ......+ +....+..+ +.|+.+.+... ...+..+.+++
T Consensus 464 LT~N~M~fk~~~i~g~~y~~~~~~~~~~~~-~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 534 (1178)
T PLN03190 464 LTENKMEFQCASIWGVDYSDGRTPTQNDHA-GYSVEVD--------GKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHD 534 (1178)
T ss_pred cccceEEEEEEEECCEEcccccccchhhhh-ccccccc--------cccccccccccCCHHHHhhhhccccchhhHHHHH
Confidence 999999999999999999753221111000 0000000 000000011 12333332211 11223356789
Q ss_pred HHHHHhhhcceeccccCC--C---CcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeee
Q 001017 508 FLRLLAICHTALPEVDEE--N---GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNV 582 (1189)
Q Consensus 508 ~~~~lalC~~~~~~~~~~--~---~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~ 582 (1189)
|+.++|+||++.++..++ . +.++|+++||||.||+++|+++|+.+..|+++.+.+...+. ..+|+++++
T Consensus 535 fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~------~~~~~il~~ 608 (1178)
T PLN03190 535 FFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGE------RQRFNVLGL 608 (1178)
T ss_pred HHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccc------eecceeEEE
Confidence 999999999999853221 1 24789999999999999999999999999999998887665 378999999
Q ss_pred ecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhc-chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHH
Q 001017 583 LEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN-GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNE 661 (1189)
Q Consensus 583 ~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~ 661 (1189)
+||+|+|||||||++++++++++||||||++|+++|... +...++.+.+++++|+.+|+||||+|||+++++|+.+|..
T Consensus 609 ~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~ 688 (1178)
T PLN03190 609 HEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHF 688 (1178)
T ss_pred ecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHH
Confidence 999999999999999999999999999999999999754 3456788899999999999999999999999999999999
Q ss_pred HHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 662 EFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 662 ~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
+|.+|+.++ .+|+++++++.+.+|+||+++|+++++|++|+|++++|+.|++|||++||+|||+.+||++||++|||++
T Consensus 689 ~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~ 767 (1178)
T PLN03190 689 SFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLT 767 (1178)
T ss_pred HHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCC
Confidence 999999998 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHH-HHHhhhhhcc-ccCCCCCCCeEEEEcCchhhhhhhHHHHHHHH
Q 001017 742 QGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL-HQLIRGKELL-DSSNESLGPLALIIDGKSLTYALEDDVKDLFL 819 (1189)
Q Consensus 742 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~ 819 (1189)
+++..+.++....+. ....++........ .+.....+.. ........+.+++|+|.+|+.++++++.+.|.
T Consensus 768 ~~~~~i~i~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~ 840 (1178)
T PLN03190 768 NKMTQIIINSNSKES-------CRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLF 840 (1178)
T ss_pred CCCeeEEecCCchhh-------HHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHH
Confidence 998888876653211 11111111100000 0000000000 00111245678999999999999888889999
Q ss_pred HHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchhhHH
Q 001017 820 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLER 899 (1189)
Q Consensus 820 ~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~l~~ 899 (1189)
+++..|++|||||++|.||+++|+.+|+..+++|+|||||+||++|||+||||||++|+||.||+++|||+|.+|++|.+
T Consensus 841 ~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~r 920 (1178)
T PLN03190 841 QLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVP 920 (1178)
T ss_pred HHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHH
Confidence 99999999999999999999999999985568999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhh
Q 001017 900 LLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLK 979 (1189)
Q Consensus 900 lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~ 979 (1189)
||++||||+|+|++++++|+||||+++++++|||+++++|||+++|++|.+++||++||++|++++|++|+|++++.+++
T Consensus 921 LLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~ 1000 (1178)
T PLN03190 921 LLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLK 1000 (1178)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhccccccccchhhhhhhhhhhHHHHHHHHHHHHHhhccccccCCCceeehhhhhhHHHHHHHHHHHHHHHHhccc
Q 001017 980 FPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTY 1059 (1189)
Q Consensus 980 ~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~n~~~~l~~~~ 1059 (1189)
+|+||+.+++++.++.+.|+.|++.|+|||+++||+.++.+.... .+.+.++.++++++++++|+++++.+++
T Consensus 1001 ~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~~-------~~~~~~~~~~~~~~v~~vnl~i~~~~~~ 1073 (1178)
T PLN03190 1001 YPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWAST-------IDGSSIGDLWTLAVVILVNLHLAMDIIR 1073 (1178)
T ss_pred CcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------cCceeEhHhhhhHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999887765321 2223457888889999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Q 001017 1060 FTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQM 1139 (1189)
Q Consensus 1060 ~t~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~~~P~~~~i 1139 (1189)
|+|+++.++|+|+++|+++.+++..++.. . .|+.++ .+..+|.||+.++++++++++|+++++++++.|+|+++++
T Consensus 1074 wt~~~~~~i~~Si~~~~i~~~~~~~~~~~-~--~~~~~~-~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~ 1149 (1178)
T PLN03190 1074 WNWITHAAIWGSIVATFICVIVIDAIPTL-P--GYWAIF-HIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQI 1149 (1178)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcccc-h--hHHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 99999999999999999999888877632 2 244343 5667899999999999999999999999999999999999
Q ss_pred HHHHHHcCCCC
Q 001017 1140 IQWFRSDGQTD 1150 (1189)
Q Consensus 1140 ~~e~~~~~~~~ 1150 (1189)
+||.++....+
T Consensus 1150 ~~~~~~~~~~~ 1160 (1178)
T PLN03190 1150 AREAEKFGTFR 1160 (1178)
T ss_pred HHHHHHhcccc
Confidence 99977665533
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-169 Score=1631.06 Aligned_cols=1051 Identities=52% Similarity=0.864 Sum_probs=916.6
Q ss_pred CCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcccc-CCCCCCccchhhhhhHHHHHhhHHHHHHHHHhhhhH
Q 001017 55 YSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-LSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDI 133 (1189)
Q Consensus 55 ~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~-~~~~~~~~~~~~l~~vl~~s~i~~~~~d~~~~~~~~ 133 (1189)
|++|.|+|+||++|+|+|++||+||++++|+|||+++++|++| +++.+++++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7889999999999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred HHhcceEEEEecC-CeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceecccccccccC
Q 001017 134 EVNNRKVKVHCGE-GAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNM 212 (1189)
Q Consensus 134 ~~n~~~~~v~~r~-g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~ 212 (1189)
++|++.++|+ |+ |++++++|+||+|||||+|++||.+|||++||++++++|.|+||||+|||||+||.|++...+...
T Consensus 81 ~~n~~~~~v~-~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~ 159 (1057)
T TIGR01652 81 EVNNRLTEVL-EGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM 159 (1057)
T ss_pred HHhCcEEEEE-CCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhcc
Confidence 9999999999 86 899999999999999999999999999999999999999999999999999999999987666544
Q ss_pred CCccccccceEEEEeecCCCCceeeEEEEEEcC-ccccCCCCcccccCceeecCCeEEEEEEEeccccceeccCCCCCCC
Q 001017 213 HEDSNFQNFKAIIRCEDPNANLYTFVGSLELEE-QQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSK 291 (1189)
Q Consensus 213 ~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g-~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~~~~~~~~~k 291 (1189)
........++|.|+||.||++++.|+|++.+++ ...|++.+|+++|||.|+||+|++|+|+|||++||+++|...++.|
T Consensus 160 ~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k 239 (1057)
T TIGR01652 160 LDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSK 239 (1057)
T ss_pred CChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCccc
Confidence 444556778999999999999999999999988 7789999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHHHHHHHHHHHhcc
Q 001017 292 RSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYL 371 (1189)
Q Consensus 292 ~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~ 371 (1189)
+|++|+.+|+++.+++.+++++|++++++..+|...... ..||+..+.. ..+.....+..+++++++++.+
T Consensus 240 ~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~----~~~yl~~~~~-----~~~~~~~~~~~~~~~~~L~~~~ 310 (1057)
T TIGR01652 240 RSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK----DLWYIRLDVS-----ERNAAANGFFSFLTFLILFSSL 310 (1057)
T ss_pred ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCC----CccceecCcc-----cccchhHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999998887776643222 2688754321 1122234566888999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEEEEEEcCeecCCC
Q 001017 372 IPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 451 (1189)
Q Consensus 372 iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~~~~~ 451 (1189)
||++|+++++++++++++++++|.+|++++.++++.+|+++++|+||+|++||+|||||||+|+|+|++|+++|..|+..
T Consensus 311 IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~ 390 (1057)
T TIGR01652 311 IPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDG 390 (1057)
T ss_pred cceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCC
Confidence 99999999999999999999999999988778899999999999999999999999999999999999999999999865
Q ss_pred chHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcceeccc-cCCCCcEE
Q 001017 452 VTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEV-DEENGKIS 530 (1189)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~-~~~~~~~~ 530 (1189)
..+......+..+...+... ......+..+|.|+++.+....+++..+.+.+|+.++++||++.++. +++.+.+.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~ 466 (1057)
T TIGR01652 391 FTEIKDAIRERLGSYVENEN----SMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEIT 466 (1057)
T ss_pred cchHHHHhhhcccccccccc----cccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceE
Confidence 44322221111110000000 00001122456666665543323344566889999999999999875 23234588
Q ss_pred EEcCChhHHHHHHHHHHCCcEEEEecCceeE--EEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEe
Q 001017 531 YEAESPDEAAFVIAARELGFEFYERTQTSIS--VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSK 608 (1189)
Q Consensus 531 ~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~--v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~K 608 (1189)
|+++||+|.||+++|+.+|+.+.+|+.+.+. +...+. ...|++++++||+|+|||||||++++++++++|+|
T Consensus 467 y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~------~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~K 540 (1057)
T TIGR01652 467 YQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGE------TKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCK 540 (1057)
T ss_pred EEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCC------EEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEe
Confidence 9999999999999999999999999887443 333332 47899999999999999999999999999999999
Q ss_pred cCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcC
Q 001017 609 GADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKN 688 (1189)
Q Consensus 609 Ga~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~ 688 (1189)
|||++|+++|...+++.++.+.+++++|+.+|+|||++|||+++++|+.+|.++|.+|+.++ .+|++.+++..+.+|+|
T Consensus 541 GA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~~~~~~~~iE~~ 619 (1057)
T TIGR01652 541 GADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKLDVVAESIEKD 619 (1057)
T ss_pred CcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHhc
Confidence 99999999998655567788999999999999999999999999999999999999999998 79999999999999999
Q ss_pred ceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHH
Q 001017 689 LILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAA 768 (1189)
Q Consensus 689 l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 768 (1189)
|+|+|++|+|||||+||+++|+.|++||||+||+|||+.+||++||++|||++++...+.+++.+.+.... ....+
T Consensus 620 L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~----~~~~i 695 (1057)
T TIGR01652 620 LILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRS----VEAAI 695 (1057)
T ss_pred CEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHH----HHHHH
Confidence 99999999999999999999999999999999999999999999999999999888887777654221100 00011
Q ss_pred HHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc
Q 001017 769 AAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK 848 (1189)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~ 848 (1189)
. .+......... ......+.+++++|++++.+++++++++|.+++..|+++||||++|+||+++|+.+|+.
T Consensus 696 ~--------~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~ 766 (1057)
T TIGR01652 696 K--------FGLEGTSEEFN-NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKS 766 (1057)
T ss_pred H--------HHHHHHHHhhh-hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhc
Confidence 1 11100000000 01124567899999999999988888899999999999999999999999999999984
Q ss_pred CCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchhhHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHH
Q 001017 849 TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGF 928 (1189)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~ 928 (1189)
.|++|+|||||+||++||++||||||++|+|+.||+++|||++.+|++|.+++++|||++|+|+++++.|.||||+++++
T Consensus 767 ~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~ 846 (1057)
T TIGR01652 767 TGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAI 846 (1057)
T ss_pred CCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 49999999999999999999999999999999999999999999999999998899999999999999999999999999
Q ss_pred HHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhccccccccchhhhhhhhhhhHHH
Q 001017 929 TLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVAN 1008 (1189)
Q Consensus 929 ~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1189)
++++|.++++|+|+++|++++++|||+++|++|++++|++|+|++++.+.++|++|+.+++++.++.+.|+.|++.|++|
T Consensus 847 ~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~ 926 (1057)
T TIGR01652 847 IQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQ 926 (1057)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccccCCCceeehhhhhhHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHhccCcc
Q 001017 1009 AAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPY 1088 (1189)
Q Consensus 1009 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~n~~~~l~~~~~t~~~~~~i~~si~~~~i~~~i~~~~~~~ 1088 (1189)
++++|++.++.+.......+|.+.+.+.+|+++|+++++++|+++++.+++|+|+++.++|+|+++++++.+++..++.
T Consensus 927 ~~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~- 1005 (1057)
T TIGR01652 927 SLVIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFP- 1005 (1057)
T ss_pred HHHHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Confidence 9999999888876544446899999999999999999999999999999999999999999999999999988875542
Q ss_pred ccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Q 001017 1089 ISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQW 1142 (1189)
Q Consensus 1089 ~~~~~~~~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~~~P~~~~i~~e 1142 (1189)
+...|+ .+..+..+|.||+.++++++++++|+++++++++.|+|+.++++||
T Consensus 1006 -~~~~~~-~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 1006 -SPAFYK-AAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred -cccHHH-HHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhC
Confidence 334455 4446778999999999999999999999999999999999999875
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-149 Score=1240.38 Aligned_cols=982 Identities=32% Similarity=0.515 Sum_probs=855.7
Q ss_pred ceEEEeCCCcchhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcccc-CCCCCCccchhhhhhHHH
Q 001017 37 SRVVHCNDPESFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-LSPYSAVSNVLPLVVVIG 115 (1189)
Q Consensus 37 ~r~~~~n~~~~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~-~~~~~~~~~~~~l~~vl~ 115 (1189)
.|.+.+.... ..+..+|++|.++..||++++|+|..|++||+-+.|+|||+.+..|++| +......+++.|++|+++
T Consensus 63 ~rt~~~~~~~--~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~ 140 (1051)
T KOG0210|consen 63 GRTVNISFGP--HYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLT 140 (1051)
T ss_pred CceeecccCC--CcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHH
Confidence 3555544421 2345689999999999999999999999999999999999999999999 433446778999999999
Q ss_pred HHhhHHHHHHHHHhhhhHHHhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCC
Q 001017 116 ATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLD 195 (1189)
Q Consensus 116 ~s~i~~~~~d~~~~~~~~~~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~Lt 195 (1189)
+++++|+++|++|++.|++.|+...+++.|+|.... ++++|+|||+|.+++||+||||+++|.+++.+|.|+|.|..||
T Consensus 141 itl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLD 219 (1051)
T KOG0210|consen 141 ITLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLD 219 (1051)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccC
Confidence 999999999999999999999999999978876554 9999999999999999999999999999999999999999999
Q ss_pred CCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCc--cccCCCCcccccCceeecCCeEEEEEE
Q 001017 196 GETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQ--QYPLTPQQLLLRDSKLRNTDCIYGAVI 273 (1189)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~--~~~l~~~n~l~rgs~l~nt~~~~gvVv 273 (1189)
|||++|.|-|.+.++++.+..++.+++ |..|.|+++++.|-|++.+... ..+|+.+|.++.++.+... .++|+|+
T Consensus 220 GETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~-t~~gvVv 296 (1051)
T KOG0210|consen 220 GETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASG-TAIGVVV 296 (1051)
T ss_pred CcccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecC-cEEEEEE
Confidence 999999999999999888887777776 8899999999999999999644 4689999999999999864 4999999
Q ss_pred EeccccceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhh
Q 001017 274 FTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRA 353 (1189)
Q Consensus 274 ~tG~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (1189)
|||.||+-++|...+++|-..++..+|.+.++++.+.++++++....-++ . ..||+
T Consensus 297 YTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~----~------~~wyi-------------- 352 (1051)
T KOG0210|consen 297 YTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF----G------SDWYI-------------- 352 (1051)
T ss_pred EecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC----C------CchHH--------------
Confidence 99999999999999999999999999999999998888877665443322 2 26875
Q ss_pred HHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccc
Q 001017 354 AVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (1189)
Q Consensus 354 ~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~ 433 (1189)
.+++++.+++.+||++|-+.+++++.+.++.+..|.++ .+..+|++++.|+||+|+|+.+|||||||+
T Consensus 353 ------~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTq 420 (1051)
T KOG0210|consen 353 ------YIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQ 420 (1051)
T ss_pred ------HHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCcccc
Confidence 78999999999999999999999999999999888755 678999999999999999999999999999
Q ss_pred cceEEEEEEEcCeecCCCch-HHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHH
Q 001017 434 NSMEFIKCSIAGTSYGRGVT-EVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 512 (1189)
Q Consensus 434 n~m~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 512 (1189)
|.|+|++++.+...|+.+.. +++....+..+... ...+.. ......+.....++..+++
T Consensus 421 NEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~-----------~~~~~~---------~~~~k~~~s~rv~~~V~al 480 (1051)
T KOG0210|consen 421 NEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGR-----------NKGKGA---------LSRVKKDMSARVRNAVLAL 480 (1051)
T ss_pred chheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCc-----------cccccc---------chhhcCcccHHHHHHHHHH
Confidence 99999999999999875432 23333322211100 000000 0111233455678899999
Q ss_pred hhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceE
Q 001017 513 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRM 592 (1189)
Q Consensus 513 alC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 592 (1189)
|+||++.|..++ +|...||+.||||.|+|+.....|..+..|+.+.+.++..... ...|+||.++||+|+.|||
T Consensus 481 alCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~-----~~~yqIL~vFPFtsEtKRM 554 (1051)
T KOG0210|consen 481 ALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDD-----ELNYQILQVFPFTSETKRM 554 (1051)
T ss_pred HHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCc-----ceeEEEEEEecccccccee
Confidence 999999998765 4689999999999999999999999999999999998877543 5899999999999999999
Q ss_pred EEEEEeC-CCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhh
Q 001017 593 SVIVRSE-EGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVS 671 (1189)
Q Consensus 593 sviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~ 671 (1189)
++|||++ .+++..|.||||.+|...... .+..++....+|++|+|||++|+|.++++||+.+.+.|+.|+.++
T Consensus 555 GIIVr~e~~~evtfylKGAD~VMs~iVq~-----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi- 628 (1051)
T KOG0210|consen 555 GIIVRDETTEEVTFYLKGADVVMSGIVQY-----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSI- 628 (1051)
T ss_pred eEEEecCCCceEEEEEecchHHHhccccc-----chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCcc-
Confidence 9999997 789999999999999877644 346778888999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHH-HHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEe
Q 001017 672 ADREELAEEIAE-KIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIIS 750 (1189)
Q Consensus 672 ~~~~~~~~~~~~-~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~ 750 (1189)
.||++++..+-+ .+|+||+++|++|+||+||++|+.+++.||+|||||||||||+.|||+.||++.+|+..+..+..+.
T Consensus 629 ~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~ 708 (1051)
T KOG0210|consen 629 SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIR 708 (1051)
T ss_pred chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEE
Confidence 899999988777 9999999999999999999999999999999999999999999999999999999999998887776
Q ss_pred CCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEE
Q 001017 751 SETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVIC 830 (1189)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~ 830 (1189)
.-.... +.+..++.. . ...+.+|+|+|++++..++ .+.++|.++.+.|.+|||
T Consensus 709 ~v~sr~------dah~eL~~l----------------R----~k~~~aLvi~G~Sl~~cl~-yye~Ef~el~~~~~aVv~ 761 (1051)
T KOG0210|consen 709 SVTSRG------DAHNELNNL----------------R----RKTDCALVIDGESLEFCLK-YYEDEFIELVCELPAVVC 761 (1051)
T ss_pred ecCCch------HHHHHHHHh----------------h----cCCCcEEEEcCchHHHHHH-HHHHHHHHHHHhcCcEEE
Confidence 553221 111111111 0 3567899999999998776 788899999999999999
Q ss_pred EeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchhhHHHHHHhhhhhhh
Q 001017 831 CRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYR 910 (1189)
Q Consensus 831 ~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~l~~lll~~GR~~~~ 910 (1189)
||++|.||+++++.+|++.++.|++||||.||++|||+||+|||+-|+||.||..||||+|.+|.++.+||++|||.+|+
T Consensus 762 CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYk 841 (1051)
T KOG0210|consen 762 CRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYK 841 (1051)
T ss_pred EecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHhhccccchHH
Confidence 99999999999999999899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhccccc
Q 001017 911 RISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQN 990 (1189)
Q Consensus 911 ~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~~~~~ 990 (1189)
|.+++-+|.+.+++++..++..|.....|...++|..+.|..|..++|.+|++.+ +.|+|+++...+.+|+||+.-..+
T Consensus 842 rsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSl-v~d~Dv~~~~a~~yPELYKeL~kg 920 (1051)
T KOG0210|consen 842 RSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSL-VLDRDVSESLAVLYPELYKELTKG 920 (1051)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhhee-eecccccHHHHhhhHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999 679999999999999999999999
Q ss_pred cccchhhhhhhhhhhHHHHHHHHHHHHHhhccccccCCCceeehhhhhhHHHHHHHHHHHHHHHHhcccchhhHHHHHHH
Q 001017 991 ILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWG 1070 (1189)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~n~~~~l~~~~~t~~~~~~i~~ 1070 (1189)
+.++.++|+.|++.++||+.++.++.+..+..+.+ .+.++.|+++++...+.+++..++|+|.....-..
T Consensus 921 r~lSYKtF~iwvLISiYQG~vim~g~~~l~~~ef~----------~ivaisFtaLi~tELiMVaLtv~tw~~~m~vae~l 990 (1051)
T KOG0210|consen 921 RSLSYKTFFIWVLISIYQGSVIMYGALLLFDTEFI----------HIVAISFTALILTELIMVALTVRTWHWLMVVAELL 990 (1051)
T ss_pred CccchhhhhhhhhHHHHcccHHHHHHHHHhhhhhe----------EeeeeeeHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 99999999999999999999999887766543322 34678899999999999999999999988887777
Q ss_pred HHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Q 001017 1071 GITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQ 1141 (1189)
Q Consensus 1071 si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~~~P~~~~i~~ 1141 (1189)
|++++++.+.+...+ +-.....++.|+.-+.++.+++++|.++.|+++|.+.|+.|..++
T Consensus 991 sL~~Yivsl~~l~~y-----------fd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl~ 1050 (1051)
T KOG0210|consen 991 SLALYIVSLAFLHEY-----------FDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAKLQ 1050 (1051)
T ss_pred HHHHHHHHHHHHHhH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhcc
Confidence 777777665443210 111223457777777888999999999999999999999998775
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-113 Score=1087.51 Aligned_cols=827 Identities=29% Similarity=0.400 Sum_probs=659.0
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcccc--CCCCCCccchhhhhhHHHHHhhHHHHHH
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP--LSPYSAVSNVLPLVVVIGATMGKEVLED 125 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~--~~~~~~~~~~~~l~~vl~~s~i~~~~~d 125 (1189)
..+|+++||.|++...+...+. +.++.||.+++++.++++++++++. +.+.. .....++++++++++..++++
T Consensus 50 ~~~r~~~~G~N~~~~~~~~~~~---~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~--~~~~~I~~~i~~n~~~g~~qe 124 (917)
T COG0474 50 VKRRLKKYGPNELPEEKKRSLL---KKFLRQFKDPFIILLLVAALLSAFVGDWVDAG--VDAIVILLVVVINALLGFVQE 124 (917)
T ss_pred HHHHHhhcCCccccccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--cceeeehHHHHHHHHHHHHHH
Confidence 4667889999999977764432 7788999999999999999999873 22211 344455566666777777888
Q ss_pred HHHhhh---hHHHhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCccee
Q 001017 126 WRRKKQ---DIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKL 202 (1189)
Q Consensus 126 ~~~~~~---~~~~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~ 202 (1189)
+++.++ ++++.+.+++|+ |||++++|+|++|+|||||+|++||.||||++||++++ .+||||+|||||.|+.
T Consensus 125 ~~a~~~l~~lk~~~~~~~~V~-R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~ 199 (917)
T COG0474 125 YRAEKALEALKKMSSPKAKVL-RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVE 199 (917)
T ss_pred HHHHHHHHHHHhhccCceEEE-eCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchh
Confidence 877555 556668999999 99999999999999999999999999999999999995 5999999999999999
Q ss_pred cccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEecccccee
Q 001017 203 KQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF 282 (1189)
Q Consensus 203 K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~ 282 (1189)
|.+..... .|.|.. ++..|++++||.++++ .+.|+|++||.+|+++
T Consensus 200 K~~~~~~~----------------~~~~~~-----------------~d~~n~l~sGt~V~~G-~~~giVvaTG~~T~~G 245 (917)
T COG0474 200 KQALPLTK----------------SDAPLG-----------------LDRDNMLFSGTTVVSG-RAKGIVVATGFETEFG 245 (917)
T ss_pred cccccccc----------------cccccc-----------------CCccceEEeCCEEEcc-eEEEEEEEEcCccHHH
Confidence 99875441 111110 4556777777777763 3999999999999887
Q ss_pred ccCCC---CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHH
Q 001017 283 QNSTG---PPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVL 359 (1189)
Q Consensus 283 ~~~~~---~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (1189)
+++.. ...+.+++++.++++..+++.+.++++++.+++..+ .... .| ..
T Consensus 246 ~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~-~~~~-------~~--------------------~~ 297 (917)
T COG0474 246 KIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF-RGGN-------GL--------------------LE 297 (917)
T ss_pred HHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCc-------cH--------------------HH
Confidence 77653 225679999999999999999999998888777632 2111 12 34
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEE
Q 001017 360 HFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFI 439 (1189)
Q Consensus 360 ~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (1189)
.+++++++++.+||++||+++++++++++.+| +++++++|+++++|+||++++||||||||||+|+|+|+
T Consensus 298 ~~~~~v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~ 367 (917)
T COG0474 298 SFLTALALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVK 367 (917)
T ss_pred HHHHHHHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEE
Confidence 89999999999999999999999999999999 88999999999999999999999999999999999999
Q ss_pred EEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhccee
Q 001017 440 KCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTAL 519 (1189)
Q Consensus 440 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~ 519 (1189)
++++.+. +.+.. + ..........+++.++++||++.
T Consensus 368 ~~~~~~~--~~~~~----------------------------------~--------~~~~~~~~~~~~l~~~~lc~~~~ 403 (917)
T COG0474 368 KIYINGG--GKDID----------------------------------D--------KDLKDSPALLRFLLAAALCNSVT 403 (917)
T ss_pred EEEeCCC--ccccc----------------------------------c--------cccccchHHHHHHHHHHhcCccc
Confidence 9998851 00000 0 00011223447899999999998
Q ss_pred ccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeC
Q 001017 520 PEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE 599 (1189)
Q Consensus 520 ~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~ 599 (1189)
+..+ + .+..+||+|.||++++.+.|+.+ .+ ......+++++.+||||+|||||+|++.+
T Consensus 404 ~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~~---------------~~~~~~~~~~~~~PFdS~rKrMsviv~~~ 462 (917)
T COG0474 404 PEKN-G----WYQAGDPTEGALVEFAEKLGFSL-DL---------------SGLEVEYPILAEIPFDSERKRMSVIVKTD 462 (917)
T ss_pred cccc-C----ceecCCccHHHHHHHHHhcCCcC-CH---------------HHHhhhcceeEEecCCCCceEEEEEEEcC
Confidence 8754 2 66789999999999999998743 10 11235678899999999999999999987
Q ss_pred CCeEEEEEecCchHHHHHhhh------cchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhc
Q 001017 600 EGTLLLLSKGADSVMFERLAE------NGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSAD 673 (1189)
Q Consensus 600 ~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~ 673 (1189)
+++++++||||||+|+++|+. ..++.++.+.+..++|+++|||+|++|||.+++++..
T Consensus 463 ~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~---------------- 526 (917)
T COG0474 463 EGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKD---------------- 526 (917)
T ss_pred CCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccc----------------
Confidence 888999999999999999974 2456788899999999999999999999977654311
Q ss_pred HHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCC
Q 001017 674 REELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET 753 (1189)
Q Consensus 674 ~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~ 753 (1189)
. .. +.+|+||+|+|+++|+||+|++|+++|+.|++|||++||+||||++||++||++||+..+..
T Consensus 527 ~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~--------- 591 (917)
T COG0474 527 D-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE--------- 591 (917)
T ss_pred c-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCC---------
Confidence 1 11 67899999999999999999999999999999999999999999999999999999854221
Q ss_pred CcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeC
Q 001017 754 PESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS 833 (1189)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~ 833 (1189)
. .++++|.+|+.+.++++.+.+. .++ ||||+
T Consensus 592 ------------------------------------------~-~~vi~G~el~~l~~~el~~~~~----~~~--VfARv 622 (917)
T COG0474 592 ------------------------------------------S-ALVIDGAELDALSDEELAELVE----ELS--VFARV 622 (917)
T ss_pred ------------------------------------------c-eeEeehHHhhhcCHHHHHHHhh----hCc--EEEEc
Confidence 1 5699999999888875555554 444 99999
Q ss_pred CcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh-hHHHHHHhhhhhhhhh
Q 001017 834 SPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF-LERLLLVHGHWCYRRI 912 (1189)
Q Consensus 834 sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~-l~~lll~~GR~~~~~i 912 (1189)
+|+||.++|+.+|+ .|++|+|+|||+||+||||+|||||||++...+.|+++||+++.++++ .....+.|||++|.|+
T Consensus 623 sP~qK~~IV~~lq~-~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni 701 (917)
T COG0474 623 SPEQKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNI 701 (917)
T ss_pred CHHHHHHHHHHHHh-CCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHH
Confidence 99999999999999 799999999999999999999999999764444488999999998666 3334499999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhccccccc
Q 001017 913 SSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNIL 992 (1189)
Q Consensus 913 ~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~ 992 (1189)
++++.|.+++|+..+++++++.++..+ ..+|+++|++|+|++++++|++++|+++ ++...+++|+ .+++..+
T Consensus 702 ~k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~~~qll~inll~d~~pa~~L~~~~---~~~~~m~~~~---~~p~~~i 773 (917)
T COG0474 702 KKFILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDSLPALALGVED---PESDVMKRPP---RGPEEGL 773 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHhhhhhheeecCC---CcccccccCC---CCccccc
Confidence 999999999999999999999988766 5679999999999999999999999975 4445555552 3788899
Q ss_pred cchhhhhhhhhhhHHHHHHHHHHHHHhhcccccc-CCCceeehhhhhhHHHHHHHHHHHHHHHHhccc----ch--hhHH
Q 001017 993 FSWTRILGWALNGVANAAIIFFFCIHAMKQQAFR-KGGEVIGLEILGTTMYTCVVWVVNCQMALSVTY----FT--YIQH 1065 (1189)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~f~~~v~~~n~~~~l~~~~----~t--~~~~ 1065 (1189)
|+++.++.|++...++..+++++.+..+...... ..+.........+++|+.+++...+..+..... |. ++.+
T Consensus 774 ~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 853 (917)
T COG0474 774 FNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSN 853 (917)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccC
Confidence 9999999999998888888887777665532211 112111244567888888887777766533222 12 2367
Q ss_pred HHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHH
Q 001017 1066 LFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVL 1115 (1189)
Q Consensus 1066 ~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~~ 1115 (1189)
..+|+++++..++.++..+.|..... .|...+.+...|+..+++.
T Consensus 854 ~~~~~~~~~~~~l~l~~~~~~~~~~~-----~f~~~~~~~~~~~~~~~~~ 898 (917)
T COG0474 854 KYLWLALLVIIILQLLIIFLPPLNLK-----IFQPTPLSLFEWLIAIAVA 898 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhHhh-----hccCCCCcHHHHHHHHHHH
Confidence 78888888888888877777643211 4445556666677765554
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-112 Score=975.32 Aligned_cols=891 Identities=20% Similarity=0.256 Sum_probs=689.2
Q ss_pred chhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccchhhhhhHHHHHhhHHHHHHH
Q 001017 47 SFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDW 126 (1189)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~s~i~~~~~d~ 126 (1189)
+.++|++.||.|+++...-..++ +.+++||.++...++|+++++|++ ..+|...+.+.++++++++..++++|
T Consensus 28 ev~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfv----l~~~~e~~vI~liiv~nvtVG~~QEy 100 (972)
T KOG0202|consen 28 EVTRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFV----LADFDEPFVITLIIVINVTVGFVQEY 100 (972)
T ss_pred HHHHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHH----HHhcccceeeeeeeeeeeeeeeeeeh
Confidence 34778899999999988765554 899999999999999999999998 45566666677777778888899999
Q ss_pred HHhhhhHHHh---cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceec
Q 001017 127 RRKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLK 203 (1189)
Q Consensus 127 ~~~~~~~~~n---~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K 203 (1189)
+..|+.+.++ +..++|+ |+|+.+.+++++|||||||.|+-||+||||++|++..+ ..||||+|||||.|+.|
T Consensus 101 ~aEkalEaLk~l~p~~~~V~-R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K 175 (972)
T KOG0202|consen 101 NAEKALEALKELVPPMAHVL-RSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSK 175 (972)
T ss_pred hhHHHHHHHHhcCCccceEE-ecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCcccccc
Confidence 9999977665 7899999 99999999999999999999999999999999999987 89999999999999999
Q ss_pred ccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccceec
Q 001017 204 QALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ 283 (1189)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~~ 283 (1189)
.......+. . ++.-++....|+||.+..|+ +.|+|+.||.+|.+++
T Consensus 176 ~t~~v~~~~--~-----------~~~~dk~NiaFsGT~V~~G~---------------------a~GIVi~TG~nTeiG~ 221 (972)
T KOG0202|consen 176 DTDAVPKDE--N-----------ADVQDKKNIAFSGTLVVAGR---------------------AKGIVIGTGLNTEIGK 221 (972)
T ss_pred cCccccCCC--C-----------CccccceeeEeecceeecCc---------------------eeEEEEeccccchHHH
Confidence 765433100 0 01112233668888888888 9999999999996633
Q ss_pred ---cCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhccccccCcccccccccCCCCCCccCchhhHHHHHH
Q 001017 284 ---NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIF-FGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVL 359 (1189)
Q Consensus 284 ---~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (1189)
.....+..++|||+++|.+...+.-+..++|+..+++ .+++....+. .+|+- ....
T Consensus 222 I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~----g~~fk----------------~~~~ 281 (972)
T KOG0202|consen 222 IFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHG----GSWFK----------------GALY 281 (972)
T ss_pred HHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhcccccc----ccchh----------------chhh
Confidence 2334566689999999999999986666666655555 2322211100 13432 2244
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEE
Q 001017 360 HFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFI 439 (1189)
Q Consensus 360 ~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (1189)
.|..++++.+++||.|||+.++...+++.++| +++++++|.+..+|.||.+++||||||||||+|+|.+.
T Consensus 282 ~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~ 351 (972)
T KOG0202|consen 282 YFKIAVSLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVS 351 (972)
T ss_pred hhhHHHHHHHHhccCCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEE
Confidence 77888999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred EEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCC--CCCchHHHHHHHHHHhhhcc
Q 001017 440 KCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWV--NEPHADVIQKFLRLLAICHT 517 (1189)
Q Consensus 440 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~lalC~~ 517 (1189)
++++.+..+... .+ ..+ .+.. -...+..+.+ .... .....+.+.++..+.++||.
T Consensus 352 ~i~~~~~~~~~~-~~--f~~---tg~t------------y~~~g~v~~~-----~~~~~~~~~~~~~l~~l~~i~~lCNd 408 (972)
T KOG0202|consen 352 KIFIPDGGTATV-DE--FNP---TGTT------------YSPEGEVFKD-----GLYEKDKAGDNDLLQELAEICALCND 408 (972)
T ss_pred EEEecccccccc-cc--ccc---CCce------------eCCCCceEec-----CccccccccccHHHHHHHHHHHhhhh
Confidence 999877654322 00 000 0000 0000001111 1001 12244567889999999999
Q ss_pred eeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEec-CceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEE
Q 001017 518 ALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT-QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIV 596 (1189)
Q Consensus 518 ~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~-~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv 596 (1189)
+....++. +.++. .+.|.|.||...|.+.|+.-.... .+... +..+.+...+.++....+||+|+||+|||.+
T Consensus 409 a~v~~~~~-~~~~~-~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~----~~~c~~~~~~~~~~~~elpFssdrK~Msv~c 482 (972)
T KOG0202|consen 409 ATVEYNDA-DCYEK-VGEPTEGALIVLAEKMGLPGTRSTNLSNEE----ASACNRVYSRLFKKIAELPFSSDRKSMSVKC 482 (972)
T ss_pred hhhhcCch-hhHHh-cCCchHHHHHHHHHHcCCCcchhhcccccc----cccchhHHHHhhhheeEeecccccceEEEEE
Confidence 88876653 33332 479999999999999998543311 11111 1122223345677789999999999999999
Q ss_pred EeCCCe--EEEEEecCchHHHHHhhhc-----------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHH
Q 001017 597 RSEEGT--LLLLSKGADSVMFERLAEN-----------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEF 663 (1189)
Q Consensus 597 ~~~~~~--~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~ 663 (1189)
.++.++ ..+|+|||+|.|+++|+.. .+..++.+.+...+++++|||+|++|+++.+..-
T Consensus 483 ~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~-------- 554 (972)
T KOG0202|consen 483 SPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQV-------- 554 (972)
T ss_pred ecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccC--------
Confidence 987665 8999999999999999532 3456888999999999999999999999876410
Q ss_pred HHHhhhhhhcHHHHHH--HHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 664 TEAKNSVSADREELAE--EIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 664 ~~a~~~~~~~~~~~~~--~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
..++.+. .-+...|.||+|+|++|+.||+|++|+++|+.|++|||+|.|+|||+++||.+||+++|+..
T Consensus 555 ---------~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~ 625 (972)
T KOG0202|consen 555 ---------PDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFS 625 (972)
T ss_pred ---------hhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCc
Confidence 0001111 12357789999999999999999999999999999999999999999999999999999876
Q ss_pred CCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHH
Q 001017 742 QGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLEL 821 (1189)
Q Consensus 742 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~ 821 (1189)
++.. -....++|.+++.+.+.++.+...
T Consensus 626 ~~ed--------------------------------------------------~~~~~~TG~efD~ls~~~~~~~~~-- 653 (972)
T KOG0202|consen 626 EDED--------------------------------------------------VSSMALTGSEFDDLSDEELDDAVR-- 653 (972)
T ss_pred CCcc--------------------------------------------------ccccccchhhhhcCCHHHHHHHhh--
Confidence 4321 112267888888777666654444
Q ss_pred HhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHH
Q 001017 822 AIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LER 899 (1189)
Q Consensus 822 ~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~ 899 (1189)
+..+|+|++|++|.+||+.||+ .|++|+|.|||.||+|+||.|||||||+-+..+.||+|||+++.|++| +..
T Consensus 654 ----~~~vFaR~~P~HK~kIVeaLq~-~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIva 728 (972)
T KOG0202|consen 654 ----RVLVFARAEPQHKLKIVEALQS-RGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVA 728 (972)
T ss_pred ----cceEEEecCchhHHHHHHHHHh-cCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHH
Confidence 4569999999999999999999 899999999999999999999999999634444499999999999777 555
Q ss_pred HHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhh
Q 001017 900 LLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLK 979 (1189)
Q Consensus 900 lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~ 979 (1189)
+ +.+||.+|.|+++++.|.+.-|+..+...|+...+. ...+++++|++|.|++++.+|+.++|++. ++.+.+.+
T Consensus 729 A-VEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~---~p~pL~pvQiLWiNlvtDG~PA~aLG~ep--~D~DiM~k 802 (972)
T KOG0202|consen 729 A-VEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFG---IPEPLIPVQILWINLVTDGPPATALGFEP--VDPDIMKK 802 (972)
T ss_pred H-HHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC---CCCcccchhhheeeeeccCCchhhcCCCC--CChhHHhC
Confidence 6 899999999999999999999999998888887764 33568999999999999999999999864 45566666
Q ss_pred CccchhccccccccchhhhhhhhhhhHHHHHHHHHHHHHhhcc--ccccC----------------CCceeehhhhhhHH
Q 001017 980 FPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQ--QAFRK----------------GGEVIGLEILGTTM 1041 (1189)
Q Consensus 980 ~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----------------~g~~~~~~~~~~~~ 1041 (1189)
.|+ ..+..++++..|+..+..|+|.++.+.+.+...+.. +..+. +...+......|+.
T Consensus 803 pPR----~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa 878 (972)
T KOG0202|consen 803 PPR----DSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMA 878 (972)
T ss_pred CCC----CCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccceEE
Confidence 666 778899999999999999999888877666554442 11100 00011111223777
Q ss_pred HHHHHHHHHHHHHHhcccch-------hhHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHH
Q 001017 1042 YTCVVWVVNCQMALSVTYFT-------YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLV 1114 (1189)
Q Consensus 1042 f~~~v~~~n~~~~l~~~~~t-------~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~ 1114 (1189)
|+++++.-.+..+ ...+++ ++.+.++.+++++.++.++++.|+|+. +. +|...++++.-|+.++.+
T Consensus 879 ~tv~V~~emfNaL-~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l-~~-----iFq~~~l~~~ew~~vl~~ 951 (972)
T KOG0202|consen 879 LTVLVFIEMFNAL-NCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPL-QR-----IFQTEPLSLAEWLLVLAI 951 (972)
T ss_pred EeehhHHHHHHHh-hcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechh-hh-----hheecCCcHHHHHHHHHH
Confidence 7877776555433 344443 567888889999999999999999964 44 667888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 001017 1115 LMSSLLPYFTYSAIQMRFF 1133 (1189)
Q Consensus 1115 ~~~~l~~~~~~k~~~~~~~ 1133 (1189)
....++.++++|++.|.+.
T Consensus 952 s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 952 SSPVIIVDEILKFIARNYF 970 (972)
T ss_pred hhhhhhHHHHHHHHHHhcc
Confidence 9999999999999999764
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-109 Score=1053.38 Aligned_cols=910 Identities=17% Similarity=0.192 Sum_probs=666.6
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccchhhhhhHHHHHhhHHHHHHHH
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWR 127 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~s~i~~~~~d~~ 127 (1189)
.++|+++||+|+++.++...+. +.+++||..++.++++++++++++ .+.|...+.++++++++++..++++++
T Consensus 32 a~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~----~~~~~~~~iIl~vv~in~~i~~~QE~~ 104 (1053)
T TIGR01523 32 AQHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFA----MHDWIEGGVISAIIALNILIGFIQEYK 104 (1053)
T ss_pred HHHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHH----HhhHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4778899999999998765443 889999999999999999999998 567777888889999999999999999
Q ss_pred HhhhhHHHh---cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceecc
Q 001017 128 RKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQ 204 (1189)
Q Consensus 128 ~~~~~~~~n---~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~ 204 (1189)
..++.+.+. +.+++|+ |||++++|+++||||||||.|++||.||||++|+++++ +.||||+|||||.|+.|.
T Consensus 105 aekal~aL~~l~~~~~~Vi-Rdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K~ 179 (1053)
T TIGR01523 105 AEKTMDSLKNLASPMAHVI-RNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIKD 179 (1053)
T ss_pred HHHHHHHHhccCCCceEEE-eCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceecc
Confidence 999976665 6789999 99999999999999999999999999999999999876 999999999999999998
Q ss_pred cccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccceecc
Q 001017 205 ALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQN 284 (1189)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~~~ 284 (1189)
+...... . ++ ....+.....|+||.+.+|+ +.|+|++||.+|.+++.
T Consensus 180 ~~~~~~~-~--~~---------~~~~d~~n~lf~GT~V~~G~---------------------g~~vVvatG~~T~~GkI 226 (1053)
T TIGR01523 180 AHATFGK-E--ED---------TPIGDRINLAFSSSAVTKGR---------------------AKGICIATALNSEIGAI 226 (1053)
T ss_pred ccccccc-c--cc---------CCcccCCCccccCceEEeee---------------------EEEEEEEecCccHHHHH
Confidence 7432100 0 00 00001122456666666666 99999999999966433
Q ss_pred CC---CC-----C------------------------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001017 285 ST---GP-----P------------------------------SKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATR 326 (1189)
Q Consensus 285 ~~---~~-----~------------------------------~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 326 (1189)
.. .. + ..+||+|+++++++.+++.+.++++++.+++..+
T Consensus 227 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~--- 303 (1053)
T TIGR01523 227 AAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF--- 303 (1053)
T ss_pred HHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 22 11 0 0149999999999999888888877766553211
Q ss_pred ccccCcccccccccCCCCCCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcc
Q 001017 327 EDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPA 406 (1189)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i 406 (1189)
. .| ...+..++++.+.++|++||++++++.++++.+| +++++
T Consensus 304 -~-------~~--------------------~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM----------ak~~~ 345 (1053)
T TIGR01523 304 -D-------VD--------------------KEVAIYAICLAISIIPESLIAVLSITMAMGAANM----------SKRNV 345 (1053)
T ss_pred -h-------hh--------------------HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----------HhcCC
Confidence 0 00 1245667889999999999999999999999999 88999
Q ss_pred cccCcchhhhccCeeEEEeCCCccccccceEEEEEEEcCe-ecCCCchHHHHHHHHhcCCCCccchhhhhccccccC-CC
Q 001017 407 RARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGT-SYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIK-GF 484 (1189)
Q Consensus 407 ~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 484 (1189)
++|+++++|+||.+++||+|||||||+|+|+++++++++. .|....... .. .+............+... ..
T Consensus 346 lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~------~~-~~~~g~~~~~~~~~~~~~~~~ 418 (1053)
T TIGR01523 346 IVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDD------AF-NPNEGNVSGIPRFSPYEYSHN 418 (1053)
T ss_pred EeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCC------CC-CCccccccccccccccccccc
Confidence 9999999999999999999999999999999999988652 221000000 00 000000000000000000 00
Q ss_pred CcCChhhhcC-----CCCC---CCchHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEe-
Q 001017 485 NFEDERIMNG-----SWVN---EPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYER- 555 (1189)
Q Consensus 485 ~~~~~~l~~~-----~~~~---~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r- 555 (1189)
...++++... .... ....+..++++.++++||++....++..+..+ ..++|+|.||+++|.+.|+.....
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~-~~GdptE~ALl~~a~~~g~~~~~~~ 497 (1053)
T TIGR01523 419 EAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK-AHGDPTEIAIHVFAKKFDLPHNALT 497 (1053)
T ss_pred ccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee-eCcCccHHHHHHHHHHcCCCccccc
Confidence 0000000000 0000 00123456788999999988765432222222 258999999999999998742100
Q ss_pred c--------Cc-eeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeCCC-eEEEEEecCchHHHHHhhhc----
Q 001017 556 T--------QT-SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEG-TLLLLSKGADSVMFERLAEN---- 621 (1189)
Q Consensus 556 ~--------~~-~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~l~~KGa~~~i~~~~~~~---- 621 (1189)
+ +. ...++.... ++....|++++.+||||+|||||++++++++ ++++|+|||||.|+++|...
T Consensus 498 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~ 574 (1053)
T TIGR01523 498 GEEDLLKSNENDQSSLSQHNE---KPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKD 574 (1053)
T ss_pred chhhhhhhccccccccccccc---cccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCC
Confidence 0 00 000100000 0113568899999999999999999998654 58899999999999999642
Q ss_pred -------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEe
Q 001017 622 -------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGA 694 (1189)
Q Consensus 622 -------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~ 694 (1189)
+++.++.+.+++++|+++|+|||++|||+++++++..+ .+.+ .. .+ .+.+|+||+|+|+
T Consensus 575 ~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~-~~--------~~~~e~~L~~~G~ 640 (1053)
T TIGR01523 575 GVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ET-LN--------RATAESDLEFLGL 640 (1053)
T ss_pred CCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cc-cc--------hhhhccCCEEEEE
Confidence 23456778889999999999999999999987654211 1100 00 01 2457899999999
Q ss_pred eeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHH
Q 001017 695 TAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKA 774 (1189)
Q Consensus 695 ~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 774 (1189)
++++||+|++++++|+.|+++||+|||+|||+++||.+||++|||++.+.. ....
T Consensus 641 ~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~---~~~~---------------------- 695 (1053)
T TIGR01523 641 IGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI---HDRD---------------------- 695 (1053)
T ss_pred EeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc---cccc----------------------
Confidence 999999999999999999999999999999999999999999999864310 0000
Q ss_pred hHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEE
Q 001017 775 SVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTL 854 (1189)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl 854 (1189)
......+++|.+++.+.++++.+... ...||||++|+||.++|+.+|+ .|++|+
T Consensus 696 -------------------~~~~~~vitG~~l~~l~~~~l~~~~~------~~~V~ar~sP~~K~~iV~~lq~-~g~~Va 749 (1053)
T TIGR01523 696 -------------------EIMDSMVMTGSQFDALSDEEVDDLKA------LCLVIARCAPQTKVKMIEALHR-RKAFCA 749 (1053)
T ss_pred -------------------ccccceeeehHHhhhcCHHHHHHHhh------cCeEEEecCHHHHHHHHHHHHh-cCCeeE
Confidence 00113689999998877665554332 3459999999999999999998 799999
Q ss_pred EEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhhHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHH
Q 001017 855 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF 932 (1189)
Q Consensus 855 ~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~ 932 (1189)
|+|||+||+|||++|||||||+.+....|+++||+++.+ |+.+.++ +.|||++|+|+++++.|.+++|+..+++.++
T Consensus 750 m~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~ 828 (1053)
T TIGR01523 750 MTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNA-IEEGRRMFDNIMKFVLHLLAENVAEAILLII 828 (1053)
T ss_pred EeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 999999999999999999999523333399999999998 6668888 8999999999999999999999999999999
Q ss_pred HHhhccccccc--chhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhccccccccchhhhhhhhhhhHHHHH
Q 001017 933 FEAYASFSGQP--VYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAA 1010 (1189)
Q Consensus 933 ~~~~~~~sg~~--~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1189)
+.++..++|.+ +++++|++|+|++++.+|+++++++ +++++.+.+.|. .+...++++..++.+++.|++.++
T Consensus 829 ~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e--~~~~~~m~~~Pr----~~~~~l~~~~~~~~~~~~g~~~~~ 902 (1053)
T TIGR01523 829 GLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLE--KAAPDLMDRLPH----DNEVGIFQKELIIDMFAYGFFLGG 902 (1053)
T ss_pred HHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccC--CCChhHHhcCCC----CCCccccCHHHHHHHHHHHHHHHH
Confidence 99988777764 5789999999999999999999984 255555556665 566789999888889999999888
Q ss_pred HHHHHHHHhhcc---cccc-----CCCce-eehhhhhhHHHHHHHHHHHHHHHH-hccc---ch----------------
Q 001017 1011 IIFFFCIHAMKQ---QAFR-----KGGEV-IGLEILGTTMYTCVVWVVNCQMAL-SVTY---FT---------------- 1061 (1189)
Q Consensus 1011 ~~~~~~~~~~~~---~~~~-----~~g~~-~~~~~~~~~~f~~~v~~~n~~~~l-~~~~---~t---------------- 1061 (1189)
+.+..+++.++. +... ..+.. .+.....++.|+++++...++.+. ++.. |.
T Consensus 903 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1053)
T TIGR01523 903 SCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFH 982 (1053)
T ss_pred HHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCcccccccccccccc
Confidence 877665433211 0000 00000 122344677777777666555432 1111 11
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001017 1062 -YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 1132 (1189)
Q Consensus 1062 -~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~~ 1132 (1189)
.+.+.++++++++.++++++..++|.. +.. +|++.+.++ .|+.++.++++.++.+++.|+++|.+
T Consensus 983 ~~~~N~~l~~~~~~~~~l~~~~~~~p~~-~~~----~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 983 SIVENKFLAWAIAFAAVSAFPTIYIPVI-NDD----VFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHhhhhh-hhh----hhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 246778888999999999888888853 311 556667775 78888888888889999999998765
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-107 Score=1040.04 Aligned_cols=877 Identities=19% Similarity=0.203 Sum_probs=668.1
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcccc--CC-------CCCCccchhhhhhHHHHHh
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP--LS-------PYSAVSNVLPLVVVIGATM 118 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~--~~-------~~~~~~~~~~l~~vl~~s~ 118 (1189)
.++|+++||+|+++.++.+.+. +.+++||.++++++++++++++++. +. ..+.+...+++++++++++
T Consensus 42 ~~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 118 (997)
T TIGR01106 42 AAEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITG 118 (997)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHH
Confidence 4778899999999887766443 8899999999999999999997763 11 1134566778889999999
Q ss_pred hHHHHHHHHHhhhhHHHh---cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCC
Q 001017 119 GKEVLEDWRRKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLD 195 (1189)
Q Consensus 119 i~~~~~d~~~~~~~~~~n---~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~Lt 195 (1189)
+.++++++|++++++.++ +.+++|+ |||++++|++++|+|||+|.|++||.|||||++++|++ +.||||+||
T Consensus 119 ~i~~~qe~ka~~~l~~l~~~~~~~~~Vi-Rdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LT 193 (997)
T TIGR01106 119 CFSYYQEAKSSKIMESFKNMVPQQALVI-RDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLT 193 (997)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEE-ECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccC
Confidence 999999999999988776 4689999 99999999999999999999999999999999999975 899999999
Q ss_pred CCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEe
Q 001017 196 GETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFT 275 (1189)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~t 275 (1189)
|||.|+.|.+++.. ..|++.+|++++||.+.. |++.|+|++|
T Consensus 194 GES~pv~K~~~~~~-------------------------------------~~~~~~~n~l~~Gt~v~~-G~~~~~V~~t 235 (997)
T TIGR01106 194 GESEPQTRSPEFTH-------------------------------------ENPLETRNIAFFSTNCVE-GTARGIVVNT 235 (997)
T ss_pred CCCCceeccCCCcc-------------------------------------cCccccCCeEEeccEeee-eeEEEEEEEc
Confidence 99999999875321 012233444444444442 3499999999
Q ss_pred ccccceeccCC---CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchh
Q 001017 276 GRDTKVFQNST---GPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKR 352 (1189)
Q Consensus 276 G~~Tk~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (1189)
|.+|++++... ..+.+++++++.++++...+..+.++++++.++++.+... .|
T Consensus 236 G~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~--------------- 291 (997)
T TIGR01106 236 GDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY---------TW--------------- 291 (997)
T ss_pred cccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CH---------------
Confidence 99998876554 5566789999999999999888888777766655432210 12
Q ss_pred hHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCcccc
Q 001017 353 AAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (1189)
Q Consensus 353 ~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT 432 (1189)
...+..++.+++.+||++|+++++++.+.++.++ +++++++|+++.+|+||++++||||||||||
T Consensus 292 -----~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT 356 (997)
T TIGR01106 292 -----LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLT 356 (997)
T ss_pred -----HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCcee
Confidence 1245566778888999999999999999999998 7889999999999999999999999999999
Q ss_pred ccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHH
Q 001017 433 CNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 512 (1189)
Q Consensus 433 ~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 512 (1189)
+|+|+|.++++++..|..+... . ..+.. .+......+.++.++
T Consensus 357 ~n~m~v~~~~~~~~~~~~~~~~-----------~--------------~~~~~------------~~~~~~~~~~ll~~~ 399 (997)
T TIGR01106 357 QNRMTVAHMWFDNQIHEADTTE-----------D--------------QSGVS------------FDKSSATWLALSRIA 399 (997)
T ss_pred cCceEEEEEEECCeEEecCCcc-----------C--------------CCCcc------------CCcccHHHHHHHHHH
Confidence 9999999999888766421100 0 00000 001123345788899
Q ss_pred hhhcceeccccCCC--CcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCc
Q 001017 513 AICHTALPEVDEEN--GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 590 (1189)
Q Consensus 513 alC~~~~~~~~~~~--~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rk 590 (1189)
++||++.+..+... -.-.+..++|+|.||++++...+.... ..+..+++++.+||+|+||
T Consensus 400 alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~------------------~~~~~~~~v~~~pF~s~rK 461 (997)
T TIGR01106 400 GLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVM------------------EMRERNPKVVEIPFNSTNK 461 (997)
T ss_pred HHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHH------------------HHHhhCceeEEeccCCCCc
Confidence 99998876433211 001244689999999999986543210 0135678889999999999
Q ss_pred eEEEEEEeC---CCeEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHH
Q 001017 591 RMSVIVRSE---EGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQ 658 (1189)
Q Consensus 591 rmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~ 658 (1189)
||+++++.. ++++++|+|||||.|+++|+.. +++.++.+.+++++++++|+|||++|||+++++++.+
T Consensus 462 ~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~ 541 (997)
T TIGR01106 462 YQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPE 541 (997)
T ss_pred eEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccc
Confidence 999998743 3568999999999999999631 2345677888899999999999999999998765432
Q ss_pred -HHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001017 659 -FNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (1189)
Q Consensus 659 -~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 737 (1189)
|.. +++ ..+.+|+||+|+|+++++||+|++|+++|++|+++||+++|+|||+..||.++|+++
T Consensus 542 ~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~ 605 (997)
T TIGR01106 542 GFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV 605 (997)
T ss_pred cccc-----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 111 111 013458999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHH
Q 001017 738 SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDL 817 (1189)
Q Consensus 738 gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~ 817 (1189)
|+++++.... + ++ . .+......... ......++++|.+++.+.++++.+
T Consensus 606 gi~~~~~~~~----~-----~i---------~--------~~~~~~~~~~~----~~~~~~~vi~G~~l~~l~~~el~~- 654 (997)
T TIGR01106 606 GIISEGNETV----E-----DI---------A--------ARLNIPVSQVN----PRDAKACVVHGSDLKDMTSEQLDE- 654 (997)
T ss_pred CCCCCCccch----h-----hh---------h--------hhccccccccc----cccccceEEEhHHhhhCCHHHHHH-
Confidence 9987543210 0 00 0 00000000000 112234799999999887765444
Q ss_pred HHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEec--CCcchhhhhcccccccc--
Q 001017 818 FLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQ-- 893 (1189)
Q Consensus 818 ~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~--g~~~~~a~~~sD~~i~~-- 893 (1189)
+...++.+||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+|+ |++. |+++||+++.+
T Consensus 655 ---~~~~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v--ak~aADivL~dd~ 728 (997)
T TIGR01106 655 ---ILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDN 728 (997)
T ss_pred ---HHHhcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHhhCCcceecCCcccHH--HHHhhceEEecCC
Confidence 444556679999999999999999998 8999999999999999999999999985 4555 89999999999
Q ss_pred chhhHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCC
Q 001017 894 FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVS 973 (1189)
Q Consensus 894 f~~l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~ 973 (1189)
|+.+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++.. ..+++++|++|+|++++++|+++++.+ +++
T Consensus 729 f~~Iv~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~---~~pl~~~qlL~inli~d~lp~~al~~e--~~~ 802 (997)
T TIGR01106 729 FASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI---PLPLGTITILCIDLGTDMVPAISLAYE--KAE 802 (997)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC---cchhHHHHHHHHHHHHHHHHHHHHhcC--CCC
Confidence 6668888 8999999999999999999999999999999988753 346889999999999999999999984 366
Q ss_pred hHHHhhCccchhccccccccchhhhhhhh-hhhHHHHHHHHHHHHHhhcc-c-----cccC---------CCc--eee--
Q 001017 974 ARFCLKFPLLYQEGVQNILFSWTRILGWA-LNGVANAAIIFFFCIHAMKQ-Q-----AFRK---------GGE--VIG-- 1033 (1189)
Q Consensus 974 ~~~~~~~P~ly~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~-----~~~~---------~g~--~~~-- 1033 (1189)
++.+.++|+ ..+...++++++++.|+ ..|++++++.|+++++.+.. + .+.. ++. ..+
T Consensus 803 ~~~m~~~P~---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (997)
T TIGR01106 803 SDIMKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQE 879 (997)
T ss_pred cccccCCCc---CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccc
Confidence 666777776 22467888888887765 45889998887766654321 1 0100 000 000
Q ss_pred ---------hhhhhhHHHHHHHHHHHHHHHH-hcccch----hhHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHH
Q 001017 1034 ---------LEILGTTMYTCVVWVVNCQMAL-SVTYFT----YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIE 1099 (1189)
Q Consensus 1034 ---------~~~~~~~~f~~~v~~~n~~~~l-~~~~~t----~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~ 1099 (1189)
.....|++|+.+++++.+..+. ++..-+ .+.+..++.++++.++++++..++|.. +. +|+
T Consensus 880 ~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~-~~-----~f~ 953 (997)
T TIGR01106 880 WTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGM-GV-----ALR 953 (997)
T ss_pred cchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhh-HH-----Hhc
Confidence 0135788888888877666652 222212 145677777777777777777777743 33 677
Q ss_pred HhccChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001017 1100 ACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 1132 (1189)
Q Consensus 1100 ~~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~~ 1132 (1189)
..++++..|+.++.++++.++..++.|+++|.+
T Consensus 954 ~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 954 MYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 788899999999999988888999999988754
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-108 Score=943.06 Aligned_cols=844 Identities=21% Similarity=0.273 Sum_probs=672.0
Q ss_pred hhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcccc-C----CCCCCccchhh---hhhHHHHHhhH
Q 001017 49 EASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-L----SPYSAVSNVLP---LVVVIGATMGK 120 (1189)
Q Consensus 49 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~-~----~~~~~~~~~~~---l~~vl~~s~i~ 120 (1189)
++|++-||+|.++..+...+. .++||.|++..-++++++|++++.. + .+.+|+....+ +++|++++++.
T Consensus 126 ~~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~n 202 (1034)
T KOG0204|consen 126 ERRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVN 202 (1034)
T ss_pred HHHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecc
Confidence 677888999999999987554 8899999999999999999999864 2 22345554433 34555677777
Q ss_pred HHHHHHHHhhhhHHHhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcc
Q 001017 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNL 200 (1189)
Q Consensus 121 ~~~~d~~~~~~~~~~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~ 200 (1189)
++.++.|-++.+++..+.++.|+ |||+.++|+..||+||||+.|+-||++||||++++|.+ +.||||++||||++
T Consensus 203 Dy~qe~QF~~L~~~k~~~k~~Vi-R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd~ 277 (1034)
T KOG0204|consen 203 DYRQELQFRKLQKEKRNIKFQVI-RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESDH 277 (1034)
T ss_pred hhHHhhhhhhhhhhhhceEEEEE-ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCcc
Confidence 77776666666766778999999 99999999999999999999999999999999999987 99999999999999
Q ss_pred eecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccc
Q 001017 201 KLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTK 280 (1189)
Q Consensus 201 ~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk 280 (1189)
+.|.+.. +.+.++||.+.+|. +.++|+.+|.+|.
T Consensus 278 v~k~~~~-------------------------dPfLlSGTkv~eGs---------------------gkMlVTaVGmnt~ 311 (1034)
T KOG0204|consen 278 VQKSLDK-------------------------DPFLLSGTKVMEGS---------------------GKMLVTAVGMNTQ 311 (1034)
T ss_pred eeccCCC-------------------------CCeEeecceeecCc---------------------ceEEEEEeeecch
Confidence 9997743 34889999999998 9999999999995
Q ss_pred e---eccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--cccccCcccccccccCCCCCCccCchhhHH
Q 001017 281 V---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIAT--REDLQDGKMKRWYLRPDDTTAYYDPKRAAV 355 (1189)
Q Consensus 281 ~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (1189)
. |.........++|||-++++++..+..+.++++++.+++..... +....+++ ..| -.......
T Consensus 312 wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~-~~~----------~~~~~~~~ 380 (1034)
T KOG0204|consen 312 WGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGG-TGT----------TWSDEYIQ 380 (1034)
T ss_pred HhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCC-CCc----------cccHHHHH
Confidence 4 55555666678999999999999998888887777766654322 11111100 001 01122234
Q ss_pred HHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccc
Q 001017 356 AAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNS 435 (1189)
Q Consensus 356 ~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~ 435 (1189)
.++..|..++.+++.++|.+||+++++..++..++| .+.+.++|.++++|++|..+.||+|||||||.|+
T Consensus 381 ~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkM----------mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~ 450 (1034)
T KOG0204|consen 381 EFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKM----------MKDNNLVRHLDACETMGSATAICSDKTGTLTTNR 450 (1034)
T ss_pred HHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHH----------hcchhHHHHhHHHhhcCCceEEEecCcCceEeee
Confidence 556677788889999999999999999999999998 4566789999999999999999999999999999
Q ss_pred eEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhh
Q 001017 436 MEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAIC 515 (1189)
Q Consensus 436 m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC 515 (1189)
|++.+.++++..|...... . ..-.+.....++.+++..
T Consensus 451 MtVV~~~~~~~~~k~~~~~-~-----------------------------------------~~l~~~~~~ll~~gI~~N 488 (1034)
T KOG0204|consen 451 MTVVQSYIGSEHYKVNSPK-S-----------------------------------------SNLPPSLLDLLLQGIAQN 488 (1034)
T ss_pred EEEEeeeeccccccccCcc-c-----------------------------------------ccCCHHHHHHHHHHHhhc
Confidence 9999999998877532110 0 000122334455666665
Q ss_pred cceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEE
Q 001017 516 HTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVI 595 (1189)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 595 (1189)
.+-....++..+.-..+.+||.|.||+.++..+|..+.. .+.+.++.+++||+|+||||+++
T Consensus 489 t~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~------------------~R~e~~v~kv~~FNS~kK~~gvv 550 (1034)
T KOG0204|consen 489 TTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD------------------VRPEEKVVKVYPFNSVKKRMGVV 550 (1034)
T ss_pred CCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh------------------hcchhheeEEeccCcccceeeEE
Confidence 554444444444344567999999999999999987754 23567788999999999999999
Q ss_pred EEeCCCeEEEEEecCchHHHHHhhhc----------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHH--HHHHHHHHH
Q 001017 596 VRSEEGTLLLLSKGADSVMFERLAEN----------GREFEEQTKEHINEYADAGLRTLILAYRELDEK--EYKQFNEEF 663 (1189)
Q Consensus 596 v~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~--e~~~~~~~~ 663 (1189)
++.+++..++|+|||.|.|+..|... +++....+++.++.||++||||+|+|||+.... +-.+|..
T Consensus 551 i~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~-- 628 (1034)
T KOG0204|consen 551 IKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN-- 628 (1034)
T ss_pred EEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc--
Confidence 99887773499999999999999753 345566889999999999999999999995443 1111110
Q ss_pred HHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCC
Q 001017 664 TEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG 743 (1189)
Q Consensus 664 ~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~ 743 (1189)
.+..+.+|+++|++||+||+||||+++|+.|++|||+|.|+|||+..||.+||.+|||++++
T Consensus 629 ------------------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~ 690 (1034)
T KOG0204|consen 629 ------------------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPG 690 (1034)
T ss_pred ------------------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCC
Confidence 13567899999999999999999999999999999999999999999999999999999866
Q ss_pred ceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHh
Q 001017 744 MRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAI 823 (1189)
Q Consensus 744 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~ 823 (1189)
.. .++++|+++..+.+.+..+...++.
T Consensus 691 ~d----------------------------------------------------~~~lEG~eFr~~s~ee~~~i~pkl~- 717 (1034)
T KOG0204|consen 691 GD----------------------------------------------------FLALEGKEFRELSQEERDKIWPKLR- 717 (1034)
T ss_pred Cc----------------------------------------------------cceecchhhhhcCHHHHHhhhhhhe-
Confidence 43 2477888888777777777777654
Q ss_pred ccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEe--cCCcchhhhhccccccccchh--hHH
Q 001017 824 GCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDIAIAQFRF--LER 899 (1189)
Q Consensus 824 ~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i--~g~~~~~a~~~sD~~i~~f~~--l~~ 899 (1189)
|.+|.+|.+|..+|+.+++ .|++|++.|||.||+|||++||||.|| +|+|. ||++||++|+|++| +++
T Consensus 718 -----VlARSSP~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDIIi~DDNFssIVk 789 (1034)
T KOG0204|consen 718 -----VLARSSPNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDIIILDDNFSSIVK 789 (1034)
T ss_pred -----eeecCCCchHHHHHHHHHh-cCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeEEEcCchHHHHH
Confidence 9999999999999999998 899999999999999999999999977 46676 99999999999766 778
Q ss_pred HHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhh
Q 001017 900 LLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLK 979 (1189)
Q Consensus 900 lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~ 979 (1189)
. +.|||..|.+++++++|.+.-|++..++.|..++.. +.++++..|++|.|++++.+.+++||.+ +|.+..+.|
T Consensus 790 ~-v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~---~dsPLtAVQlLWVNLIMDTLgALALATe--pPt~~Lm~R 863 (1034)
T KOG0204|consen 790 A-VKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACAT---GDSPLTAVQLLWVNLIMDTLGALALATE--PPTDELMKR 863 (1034)
T ss_pred H-HHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhc---CCccHHHHHHHHHHHHHHHHHHHHhccC--CCChHHhcC
Confidence 7 899999999999999999999999988888887765 5678999999999999999999999975 366777777
Q ss_pred CccchhccccccccchhhhhhhhhhhHHHHHHHHHHHHHhhccccccCCCcee-ehhhhhhHHHHHHHHHHHHHHHHh--
Q 001017 980 FPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVI-GLEILGTTMYTCVVWVVNCQMALS-- 1056 (1189)
Q Consensus 980 ~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~f~~~v~~~n~~~~l~-- 1056 (1189)
.|. |++.+++++.+|..++.+++||-+++|.+.+... ..|..++... ......|++|.++|+.+-+.-+..
T Consensus 864 kP~----GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~--~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRk 937 (1034)
T KOG0204|consen 864 KPV----GRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK--SIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARK 937 (1034)
T ss_pred CCC----CCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch--hhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcc
Confidence 787 9999999999999999999999999998877643 2343444432 233556888888887665544321
Q ss_pred ---cccch-hhHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHH
Q 001017 1057 ---VTYFT-YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAI 1128 (1189)
Q Consensus 1057 ---~~~~t-~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~~ 1128 (1189)
.+.|. .+++..+.+.+...+++++++..+... ++.+.++++..|+.++++.++.++.-.+.|.+
T Consensus 938 i~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~--------~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 938 IDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGA--------FFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred hhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCc--------ceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 11122 223444555566777888877766543 45577899999999999999888888777655
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-105 Score=1019.77 Aligned_cols=867 Identities=21% Similarity=0.229 Sum_probs=653.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcccc-CCC-----CCCccchhhhhhHHHHHhhHHHHHHHHHhhhhHHHh---cceEEEEec
Q 001017 75 LFEQFRRVANVYFLICAILSFTP-LSP-----YSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVN---NRKVKVHCG 145 (1189)
Q Consensus 75 l~~qf~~~~~~~fl~~~il~~~~-~~~-----~~~~~~~~~l~~vl~~s~i~~~~~d~~~~~~~~~~n---~~~~~v~~r 145 (1189)
+++||++|++++++++++++++. +.+ .+.|...+.++++++++++...+++++.+++.+.+. +.+++|+ |
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~Vi-R 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVL-R 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE-E
Confidence 36899999999999999999985 221 134556667778888888889999999998877665 5789999 9
Q ss_pred CCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceecccccccccCCCccccccceEEE
Q 001017 146 EGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAII 225 (1189)
Q Consensus 146 ~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i 225 (1189)
||++++|+++||+|||||.|++||.|||||+|++|++ |.||||+|||||.|+.|.++.....
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~~-------------- 141 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPDE-------------- 141 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCcc--------------
Confidence 9999999999999999999999999999999999976 9999999999999999987532110
Q ss_pred EeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccceec---cCCCCCCCCcHHHHHHHHH
Q 001017 226 RCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ---NSTGPPSKRSKVERRMDKI 302 (1189)
Q Consensus 226 ~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~ 302 (1189)
...+.+.+|++++||.+.+ |++.|+|++||.+|++++ +...++.+++++|++++++
T Consensus 142 --------------------~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~ 200 (917)
T TIGR01116 142 --------------------RAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEF 200 (917)
T ss_pred --------------------ccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHH
Confidence 0112334566666666665 569999999999997754 5566777899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHH
Q 001017 303 IYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEI 382 (1189)
Q Consensus 303 ~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~ 382 (1189)
...++.+.++++++.++++..+....... ..| ....+..+..++++++++||++||+++++
T Consensus 201 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~---~~~----------------~~~~~~~~~~~i~l~v~~iP~~Lp~~vti 261 (917)
T TIGR01116 201 GELLSKVIGLICILVWVINIGHFNDPALG---GGW----------------IQGAIYYFKIAVALAVAAIPEGLPAVITT 261 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccc---chh----------------HHHHHHHHHHHHhhhhhccccccHHHHHH
Confidence 99988887777776655442211000000 011 11223355567889999999999999999
Q ss_pred HHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHh
Q 001017 383 VKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARR 462 (1189)
Q Consensus 383 ~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~ 462 (1189)
+.+.++.+| +++++++|+++.+|+||++++||||||||||+|+|++.+++..+..+.... .
T Consensus 262 ~l~~~~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-~-------- 322 (917)
T TIGR01116 262 CLALGTRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN-E-------- 322 (917)
T ss_pred HHHHHHHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc-e--------
Confidence 999999999 788999999999999999999999999999999999999987653321000 0
Q ss_pred cCCCCccchhhhhccccccCCCCcC--ChhhhcCCCCCCCchHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHH
Q 001017 463 KGSPLEEEVTEEQEDKASIKGFNFE--DERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAA 540 (1189)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~a 540 (1189)
. ...+..+. +..+.+.......+....+.++.++++||++....++..+.++ ..++|+|.|
T Consensus 323 ----~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~-~~gdp~E~A 385 (917)
T TIGR01116 323 ----F------------CVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYE-KVGEATEAA 385 (917)
T ss_pred ----E------------EecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCcee-eccChhHHH
Confidence 0 00000000 0000000000011234466788999999998765433333222 247999999
Q ss_pred HHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhh
Q 001017 541 FVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAE 620 (1189)
Q Consensus 541 lv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~ 620 (1189)
|++++.+.|+....+..+.+.....+.. ...+..|++++.+||||+||||||+++. ++++++|+|||||.|+++|+.
T Consensus 386 Ll~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~ 462 (917)
T TIGR01116 386 LKVLVEKMGLPATKNGVSSKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTH 462 (917)
T ss_pred HHHHHHHcCCCchhcccccccccccchh--HHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccc
Confidence 9999999998766544333322211110 0123568899999999999999999997 467899999999999999964
Q ss_pred c----------chhhHHHHHHHHHHHHh-ccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCc
Q 001017 621 N----------GREFEEQTKEHINEYAD-AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNL 689 (1189)
Q Consensus 621 ~----------~~~~~~~~~~~l~~~a~-~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l 689 (1189)
. +++.++.+.+++++|++ +|+|||++|||.+++++.. +. . .+. ...+.+|+||
T Consensus 463 ~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~---------~-~~~-----~~~~~~e~~l 526 (917)
T TIGR01116 463 ILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-DL---------L-SDP-----ANFEAIESDL 526 (917)
T ss_pred eecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc-cc---------c-ccc-----hhhhhhcCCc
Confidence 1 23456778889999999 9999999999999764321 00 0 010 1225689999
Q ss_pred eEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHH
Q 001017 690 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAA 769 (1189)
Q Consensus 690 ~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 769 (1189)
+|+|+++++||+|++++++|+.|+++||++||+|||+.+||.++|+++|+..++...
T Consensus 527 ~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v----------------------- 583 (917)
T TIGR01116 527 TFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDV----------------------- 583 (917)
T ss_pred EEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccc-----------------------
Confidence 999999999999999999999999999999999999999999999999997643221
Q ss_pred HHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcC
Q 001017 770 AALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT 849 (1189)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~ 849 (1189)
....++|..++.+.+++..+ ..++.+||||++|+||.++|+.+|+ .
T Consensus 584 ---------------------------~~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~K~~iV~~lq~-~ 629 (917)
T TIGR01116 584 ---------------------------TFKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSHKSELVELLQE-Q 629 (917)
T ss_pred ---------------------------cceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHHHHHHHHHHHh-c
Confidence 01245666665544333222 1235679999999999999999998 8
Q ss_pred CCeEEEEcCCCCChhhhhhcCeeEEec-CCcchhhhhcccccccc--chhhHHHHHHhhhhhhhhhhHhHHHHHHHHHHH
Q 001017 850 SSTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAF 926 (1189)
Q Consensus 850 ~~~vl~iGDG~ND~~ml~~A~vGI~i~-g~~~~~a~~~sD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~kni~~ 926 (1189)
|++|+|+|||.||++||++|||||+|+ |++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|.+++|+..
T Consensus 630 g~~va~iGDG~ND~~alk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i~~~l~~ni~~ 706 (917)
T TIGR01116 630 GEIVAMTGDGVNDAPALKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFIRYMISSNIGE 706 (917)
T ss_pred CCeEEEecCCcchHHHHHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHhccHHH
Confidence 999999999999999999999999995 3333 88999999999 7779988 7999999999999999999999999
Q ss_pred HHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhccccccccchhhhhhhhhhhH
Q 001017 927 GFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGV 1006 (1189)
Q Consensus 927 ~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~ 1006 (1189)
+++.+++.++. ...+|++++++|+|++++.+|++++++++ ++++.+.++|. .+.++++++++++.|++.|+
T Consensus 707 ~~~~~~~~~~~---~~~pl~~~qll~inli~d~lp~~~l~~~~--~~~~~m~~pP~----~~~~~l~~~~~~~~~~~~g~ 777 (917)
T TIGR01116 707 VVCIFLTAALG---IPEGLIPVQLLWVNLVTDGLPATALGFNP--PDKDIMWKPPR----RPDEPLITGWLFFRYLVVGV 777 (917)
T ss_pred HHHHHHHHHHc---CCchHHHHHHHHHHHHHHHHHHHHHhcCC--cchhHhcCCCC----CCCCCcccHHHHHHHHHHHH
Confidence 99999987763 22579999999999999999999999865 44555556665 56788999999999999999
Q ss_pred HHHHHHHHHHHHhhcc-ccccC-----------CCce----eehhhhhhHHHHHHHHHHHHHHHH-hccc---c--hhhH
Q 001017 1007 ANAAIIFFFCIHAMKQ-QAFRK-----------GGEV----IGLEILGTTMYTCVVWVVNCQMAL-SVTY---F--TYIQ 1064 (1189)
Q Consensus 1007 ~~~~~~~~~~~~~~~~-~~~~~-----------~g~~----~~~~~~~~~~f~~~v~~~n~~~~l-~~~~---~--t~~~ 1064 (1189)
++++++++.+.+.+.. ..... ++.. .+.....|++|+++++.+.++.+. ++.. | ..+.
T Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~ 857 (917)
T TIGR01116 778 YVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWV 857 (917)
T ss_pred HHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCcc
Confidence 9998866555443321 11100 1100 012334688888888877666553 2221 2 1245
Q ss_pred HHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001017 1065 HLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQM 1130 (1189)
Q Consensus 1065 ~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~ 1130 (1189)
+.++|+++++.+++++++.++|.. +. +|+..+.++..|+.++.++++.++.+++.|+++|
T Consensus 858 n~~~~~~~~~~~~l~~~~~~v~~~-~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 858 NKWLIGAICLSMALHFLILYVPFL-SR-----IFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred CHHHHHHHHHHHHHHHHHHHhHHH-HH-----HhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 677888888888888888888842 33 6778889999999999999999999999998763
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-105 Score=1023.38 Aligned_cols=835 Identities=20% Similarity=0.256 Sum_probs=637.4
Q ss_pred chhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccccC------C---CCCCccc----hhhhhhH
Q 001017 47 SFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPL------S---PYSAVSN----VLPLVVV 113 (1189)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~------~---~~~~~~~----~~~l~~v 113 (1189)
+.++|+++||+|+++.++.+.+. +.+++||+++++++|+++++++++.. + +...|.. +++++++
T Consensus 65 ev~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~ 141 (941)
T TIGR01517 65 TLERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILV 141 (941)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHH
Confidence 35778899999999999886543 78999999999999999999998731 1 1112222 2334444
Q ss_pred HHHHhhHHHHHHHHHhhhhHHHhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecC
Q 001017 114 IGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTN 193 (1189)
Q Consensus 114 l~~s~i~~~~~d~~~~~~~~~~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~ 193 (1189)
++++++.++.++++.++.++..++.+++|+ |||++++|++++|+|||||.|++||.|||||+|++|++ +.||||+
T Consensus 142 ~~i~~~~e~~~~~~~~~l~~~~~~~~~~Vi-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~----l~VdES~ 216 (941)
T TIGR01517 142 VLVTAVNDYKKELQFRQLNREKSAQKIAVI-RGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLS----LEIDESS 216 (941)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCCCceEEE-ECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCc----EEEEecc
Confidence 556666666666666665544567899999 99999999999999999999999999999999999954 9999999
Q ss_pred CCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEE
Q 001017 194 LDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVI 273 (1189)
Q Consensus 194 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv 273 (1189)
|||||.|+.|.+++.. ..|+||.+.+|+ +.|+|+
T Consensus 217 LTGES~pv~K~~~~~n-------------------------~v~~GT~v~~G~---------------------~~~iV~ 250 (941)
T TIGR01517 217 ITGESDPIKKGAPKDS-------------------------FLLSGTVVNEGS---------------------GRMLVT 250 (941)
T ss_pred cCCCCCcccccCCCCc-------------------------eEEeCCeEEeeE---------------------EEEEEE
Confidence 9999999999875421 458888888887 999999
Q ss_pred Eeccccce---eccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCc
Q 001017 274 FTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDP 350 (1189)
Q Consensus 274 ~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (1189)
+||.+|.+ ..+...++ +++++++.++++...+..+.++++++.++++.+...... .|. +. .++
T Consensus 251 ~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~------~~~---~~----~~~ 316 (941)
T TIGR01517 251 AVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRI------IRG---DG----RDT 316 (941)
T ss_pred EeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------ccc---cc----ccc
Confidence 99999954 44444444 457999999999999888877777766655432110000 000 00 000
Q ss_pred hhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCcc
Q 001017 351 KRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGT 430 (1189)
Q Consensus 351 ~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGT 430 (1189)
......+...+..++++++.+||++|++++++....++.++ +++++++|+++.+|+||++++||||||||
T Consensus 317 ~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTGT 386 (941)
T TIGR01517 317 EEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDKTGT 386 (941)
T ss_pred chhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcCcCc
Confidence 00112344578889999999999999999999999999888 88999999999999999999999999999
Q ss_pred ccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHH
Q 001017 431 LTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLR 510 (1189)
Q Consensus 431 LT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 510 (1189)
||+|+|++++++..+..+.... +.. .. .....+++.
T Consensus 387 LT~n~m~v~~~~~~~~~~~~~~--------------------------------------~~~-----~~-~~~~~~~l~ 422 (941)
T TIGR01517 387 LTQNVMSVVQGYIGEQRFNVRD--------------------------------------VLR-----NV-PKHVRNILV 422 (941)
T ss_pred eeeceEEEEEEEEecceEecCc--------------------------------------ccc-----cC-CHHHHHHHH
Confidence 9999999999987654432110 000 00 112344555
Q ss_pred HHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCc
Q 001017 511 LLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 590 (1189)
Q Consensus 511 ~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rk 590 (1189)
..+.||+..+...++.+ ..+..+||+|.|+++++++.|..... .+..+++++.+||+|+||
T Consensus 423 ~~~~~~s~~~~~~~~~~-~~~~~g~p~e~All~~~~~~~~~~~~------------------~~~~~~~~~~~pF~s~~k 483 (941)
T TIGR01517 423 EGISLNSSSEEVVDRGG-KRAFIGSKTECALLGFLLLLGRDYQE------------------VRAEEKVVKIYPFNSERK 483 (941)
T ss_pred HHHHhCCCCccccCCCC-ccccCCCccHHHHHHHHHHcCCCHHH------------------HHhhchhccccccCCCCC
Confidence 55556555443211111 12456899999999999887643210 113567788999999999
Q ss_pred eEEEEEEeCCCeEEEEEecCchHHHHHhhhc----ch-----hhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHH
Q 001017 591 RMSVIVRSEEGTLLLLSKGADSVMFERLAEN----GR-----EFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNE 661 (1189)
Q Consensus 591 rmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----~~-----~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~ 661 (1189)
||+++++.+++++++|+|||||.|+++|... +. +.++++.+.+++++++|+|++++|||+++.+++..|
T Consensus 484 ~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~-- 561 (941)
T TIGR01517 484 FMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK-- 561 (941)
T ss_pred eEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc--
Confidence 9999999888889999999999999999641 11 135678888999999999999999999976543211
Q ss_pred HHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 662 EFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 662 ~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
+..|+||+|+|+++++|++|++++++|+.|+++||++||+|||++.||.++|++|||.+
T Consensus 562 ---------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~ 620 (941)
T TIGR01517 562 ---------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILT 620 (941)
T ss_pred ---------------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCC
Confidence 23468999999999999999999999999999999999999999999999999999975
Q ss_pred CCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHH
Q 001017 742 QGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLEL 821 (1189)
Q Consensus 742 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~ 821 (1189)
++. .+++|+++..+.++++.+.+.
T Consensus 621 ~~~------------------------------------------------------~vi~G~~~~~l~~~el~~~i~-- 644 (941)
T TIGR01517 621 FGG------------------------------------------------------LAMEGKEFRRLVYEEMDPILP-- 644 (941)
T ss_pred CCc------------------------------------------------------eEeeHHHhhhCCHHHHHHHhc--
Confidence 431 267777777666655555433
Q ss_pred HhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEec--CCcchhhhhcccccccc--chhh
Q 001017 822 AIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQ--FRFL 897 (1189)
Q Consensus 822 ~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~--g~~~~~a~~~sD~~i~~--f~~l 897 (1189)
+..||||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ |++. |+++||+++++ |+.+
T Consensus 645 ----~~~Vfar~sPe~K~~iV~~lq~-~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aADivL~dd~f~~I 717 (941)
T TIGR01517 645 ----KLRVLARSSPLDKQLLVLMLKD-MGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV--AKEASDIILLDDNFASI 717 (941)
T ss_pred ----cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCCchHHHHHhCCcceecCCCccHH--HHHhCCEEEecCCHHHH
Confidence 3459999999999999999998 8999999999999999999999999995 4444 99999999996 6668
Q ss_pred HHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHH
Q 001017 898 ERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFC 977 (1189)
Q Consensus 898 ~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~ 977 (1189)
.++ +.|||++|+|+++++.|.+++|+..+++.+++.++.+ ..++++++++|+|++++++|+++++.. ++++.+
T Consensus 718 ~~~-i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~---~~pl~~~qil~inl~~d~~~al~l~~e---~~~~~l 790 (941)
T TIGR01517 718 VRA-VKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS---TSPLTAVQLLWVNLIMDTLAALALATE---PPTEAL 790 (941)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHhhHHHHccC---CccHHH
Confidence 888 7999999999999999999999999999988877753 457999999999999999999999853 455556
Q ss_pred hhCccchhccccccccchhhhhhhhhhhHHHHHHHHHHHHHhhccccccCCC----ceeehhhhhhHHHHHHHHHHHHHH
Q 001017 978 LKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGG----EVIGLEILGTTMYTCVVWVVNCQM 1053 (1189)
Q Consensus 978 ~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~f~~~v~~~n~~~ 1053 (1189)
+++|+. .+..+++++.++..|+++|++++++.+++++.... .+...+ .........|++|.++++...++.
T Consensus 791 m~~~P~---~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~ 865 (941)
T TIGR01517 791 LDRKPI---GRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNE 865 (941)
T ss_pred HhCCCC---CCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcccCcccccccccchhhHHHHHHHHHHHHHHH
Confidence 655552 56678899999999999999999988877654321 111111 000122456788888887776665
Q ss_pred HHh-cc----cc-hhhHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHH
Q 001017 1054 ALS-VT----YF-TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSA 1127 (1189)
Q Consensus 1054 ~l~-~~----~~-t~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~ 1127 (1189)
+.. +. .| .++++..+|.++++.+++++++..+. +. +|+..++++..|+.+++++++.++..++.|+
T Consensus 866 ~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~---~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~ 937 (941)
T TIGR01517 866 INARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFG---GS-----FFSTVSLSIEQWIGCVLLGMLSLIFGVLLRL 937 (941)
T ss_pred HHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHH---HH-----HhcccCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 432 11 12 23466777777777777776655321 22 6677788999999999998888888888877
Q ss_pred H
Q 001017 1128 I 1128 (1189)
Q Consensus 1128 ~ 1128 (1189)
+
T Consensus 938 ~ 938 (941)
T TIGR01517 938 I 938 (941)
T ss_pred c
Confidence 5
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-101 Score=979.98 Aligned_cols=828 Identities=19% Similarity=0.212 Sum_probs=643.5
Q ss_pred chhhcccCCCCceEecCCCcchhhhHHHHHHHH-HHHHHHHHHHHHHhccccCCCCCCccchhhhhhHHHHHhhHHHHHH
Q 001017 47 SFEASVLNYSGNYVRTTKYTLATFFPKALFEQF-RRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLED 125 (1189)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf-~~~~~~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~s~i~~~~~d 125 (1189)
+.++|+++||+|+++.++.+.+. +.+++|| .+|++++++++++++++ .+.|...+.+++++++..+..++++
T Consensus 29 ev~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~----~g~~~~~~~i~~~i~~~~~i~~~qe 101 (884)
T TIGR01522 29 EASHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVF----MGNIDDAVSITLAILIVVTVGFVQE 101 (884)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHH----HcchhhHHHHHhHHHHHHHHHHHHH
Confidence 34678899999999988765443 8899999 99999999999999988 4555666666666777778899999
Q ss_pred HHHhhhhHHHh---cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCccee
Q 001017 126 WRRKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKL 202 (1189)
Q Consensus 126 ~~~~~~~~~~n---~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~ 202 (1189)
++.+++.+.+. +.+++|+ |||++++|+++||+|||||.|++||.|||||+|++|++ +.||||+|||||.|+.
T Consensus 102 ~~a~~~l~~L~~l~~~~~~Vi-Rdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~ 176 (884)
T TIGR01522 102 YRSEKSLEALNKLVPPECHLI-REGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVS 176 (884)
T ss_pred HHHHHHHHHHhccCCCeeEEE-ECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCccee
Confidence 99988877665 6789999 99999999999999999999999999999999999976 8999999999999999
Q ss_pred cccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEecccccee
Q 001017 203 KQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF 282 (1189)
Q Consensus 203 K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~ 282 (1189)
|.+++..... ..+..+.+...|+||.+.+|. +.++|++||.+|.++
T Consensus 177 K~~~~~~~~~-------------~~~~~~~~n~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~g 222 (884)
T TIGR01522 177 KVTAPIPAAT-------------NGDLAERSNIAFMGTLVRCGH---------------------GKGIVVGTGSNTEFG 222 (884)
T ss_pred cccccccccc-------------cccccccCceEEeCCEEEeee---------------------EEEEEEEecCccHHH
Confidence 9987532110 001112333567787777777 999999999999654
Q ss_pred c---cCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHH
Q 001017 283 Q---NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVL 359 (1189)
Q Consensus 283 ~---~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (1189)
+ ....+...++++++.++++..++.++.++++++.+++.. +... .| ..
T Consensus 223 ki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~--------~~--------------------~~ 273 (884)
T TIGR01522 223 AVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGK--------DW--------------------LE 273 (884)
T ss_pred HHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcC--------CH--------------------HH
Confidence 3 344556668999999999999887766655544433321 1110 12 22
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEE
Q 001017 360 HFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFI 439 (1189)
Q Consensus 360 ~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (1189)
.+..++++++.+||++||++++++...+..++ +++++++|+++.+|.||++++||||||||||+|+|++.
T Consensus 274 ~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~ 343 (884)
T TIGR01522 274 MFTISVSLAVAAIPEGLPIIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVT 343 (884)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEE
Confidence 66778889999999999999999999999988 88999999999999999999999999999999999999
Q ss_pred EEEEcCeecCC-CchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcce
Q 001017 440 KCSIAGTSYGR-GVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTA 518 (1189)
Q Consensus 440 ~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~ 518 (1189)
+++..+..+.. .... .+ + ......++. ...........+++.+.++||+.
T Consensus 344 ~i~~~~~~~~~~~~~~------------~~----------~-~~~~~~~~~------~~~~~~~~~~~~~l~~~~l~~~~ 394 (884)
T TIGR01522 344 KIWTSDGLHTMLNAVS------------LN----------Q-FGEVIVDGD------VLHGFYTVAVSRILEAGNLCNNA 394 (884)
T ss_pred EEEecCceEeeccCCc------------cC----------C-CCccccccc------ccccccCHHHHHHHHHHhhhCCC
Confidence 99875543210 0000 00 0 000000000 00011123456788889999988
Q ss_pred eccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEe
Q 001017 519 LPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRS 598 (1189)
Q Consensus 519 ~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~ 598 (1189)
..+..+ +. ..+||.|.|+++++++.|+... ...++.++.+||+|+||||+++++.
T Consensus 395 ~~~~~~--~~---~~g~p~e~All~~~~~~~~~~~--------------------~~~~~~~~~~pF~s~~k~m~v~~~~ 449 (884)
T TIGR01522 395 KFRNEA--DT---LLGNPTDVALIELLMKFGLDDL--------------------RETYIRVAEVPFSSERKWMAVKCVH 449 (884)
T ss_pred eecCCC--CC---cCCChHHHHHHHHHHHcCcHhH--------------------HhhCcEEeEeCCCCCCCeEEEEEEE
Confidence 654321 11 2378999999999998775311 1356778899999999999999987
Q ss_pred C-CCeEEEEEecCchHHHHHhhhc----------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHh
Q 001017 599 E-EGTLLLLSKGADSVMFERLAEN----------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAK 667 (1189)
Q Consensus 599 ~-~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~ 667 (1189)
+ ++++++|+|||||.|+++|... +++.++.+.+++++++.+|+|++++|||+++
T Consensus 450 ~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~--------------- 514 (884)
T TIGR01522 450 RQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEK--------------- 514 (884)
T ss_pred cCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCC---------------
Confidence 4 5678999999999999999642 1334567788889999999999999998752
Q ss_pred hhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEE
Q 001017 668 NSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 747 (1189)
Q Consensus 668 ~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~ 747 (1189)
.+|+|+|+++++|++|+|++++|+.|+++||+++|+|||+.+||.++|+++||...+..
T Consensus 515 -------------------~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~-- 573 (884)
T TIGR01522 515 -------------------GQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ-- 573 (884)
T ss_pred -------------------CCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc--
Confidence 58999999999999999999999999999999999999999999999999999753311
Q ss_pred EEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccce
Q 001017 748 IISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCAS 827 (1189)
Q Consensus 748 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~ 827 (1189)
+++|++++...++++.+.+. +.
T Consensus 574 ----------------------------------------------------~v~g~~l~~~~~~~l~~~~~------~~ 595 (884)
T TIGR01522 574 ----------------------------------------------------SVSGEKLDAMDDQQLSQIVP------KV 595 (884)
T ss_pred ----------------------------------------------------eeEhHHhHhCCHHHHHHHhh------cC
Confidence 45666666554444444332 44
Q ss_pred eEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhhHHHHHHhh
Q 001017 828 VICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHG 905 (1189)
Q Consensus 828 vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l~~lll~~G 905 (1189)
.||||++|+||..+|+.+|+ .|+.|+|+|||.||+|||++|||||+|+....+.|+++||+++.+ |..+..+ +.+|
T Consensus 596 ~Vfar~~P~~K~~iv~~lq~-~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~-i~~g 673 (884)
T TIGR01522 596 AVFARASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSA-IEEG 673 (884)
T ss_pred eEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHH-HHHH
Confidence 59999999999999999998 799999999999999999999999999523333378999999988 5557777 8999
Q ss_pred hhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchh
Q 001017 906 HWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQ 985 (1189)
Q Consensus 906 R~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~ 985 (1189)
|.+|+|+++++.|.++.|+...++.+++.++. ...++++++++|+|++++.+|+++++.+ +++++.+.+.|+
T Consensus 674 R~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~~a~~l~~e--~~~~~~m~~~P~--- 745 (884)
T TIGR01522 674 KGIFNNIKNFITFQLSTSVAALSLIALATLMG---FPNPLNAMQILWINILMDGPPAQSLGVE--PVDKDVMRKPPR--- 745 (884)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc---CCCchhHHHHHHHHHHHHhhHHHHhccC--CCChhHhhCCCC---
Confidence 99999999999999999999887777666553 3457999999999999999999999874 255555555565
Q ss_pred ccccccccchhhhhhhhhhhHHHHHHHHHHHHHhhccccccCCCceeehhhhhhHHHHHHHHHHHHHHHH-hccc---c-
Q 001017 986 EGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMAL-SVTY---F- 1060 (1189)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~n~~~~l-~~~~---~- 1060 (1189)
+++.+++++.++..++++|++++++.++++...+.. |.. .....|++|.++++.+.++.+. ++.. |
T Consensus 746 -~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~--~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~ 816 (884)
T TIGR01522 746 -PRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD------GVI--TARDTTMTFTCFVFFDMFNALACRSQTKSVFE 816 (884)
T ss_pred -CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC------Ccc--hhhHHHHHHHHHHHHHHHHHHHHccCCccccc
Confidence 677899999999999999999888776654432211 111 1234578888877776666542 2222 2
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001017 1061 -TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 1132 (1189)
Q Consensus 1061 -t~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~~ 1132 (1189)
.++++..+|+++++.+++++++.++|.. +. +|+..++++..|+.+++++++.++..++.|+++|.+
T Consensus 817 ~~~~~n~~~~~~~~~~~~~~~~~~~~p~~-~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 817 IGFFSNRMFNYAVGGSIIGQLLVIYFPPL-QS-----VFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred cCcccCHHHHHHHHHHHHHHHHHHHHHHH-HH-----HHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 2346788899999988889888888742 33 677888999999999999999999999999988754
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-98 Score=969.26 Aligned_cols=849 Identities=19% Similarity=0.204 Sum_probs=604.7
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccchhhhhhHHHHHhhHHHHHHHH
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWR 127 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~s~i~~~~~d~~ 127 (1189)
.++|+++||+|.+..++.+++ +.+++||..|++++++++++++++ .++|.+.+.++++++++.+...+++++
T Consensus 145 ~~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~----~~~~~~~~~i~~i~~~~~~~~~~~~~k 216 (1054)
T TIGR01657 145 IAQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLL----DEYYYYSLCIVFMSSTSISLSVYQIRK 216 (1054)
T ss_pred HHHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356788999999999876655 889999999999988888777776 456667777777888888888888888
Q ss_pred HhhhhHHHh--cceEEEEecCCeEEEeecccCccccEEEec--cCCcCCccEEEeecccCCceEEEEecCCCCCCcceec
Q 001017 128 RKKQDIEVN--NRKVKVHCGEGAFDYTKWRDLKVGDVVKVE--KDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLK 203 (1189)
Q Consensus 128 ~~~~~~~~n--~~~~~v~~r~g~~~~i~~~~l~vGDII~l~--~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K 203 (1189)
..++.+++. ++.++|+ |||++++|+++||+|||||.|+ +|+.+|||++|++|+ |.||||+|||||.|+.|
T Consensus 217 ~~~~L~~~~~~~~~v~V~-Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-----~~VdES~LTGES~Pv~K 290 (1054)
T TIGR01657 217 QMQRLRDMVHKPQSVIVI-RNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-----CIVNESMLTGESVPVLK 290 (1054)
T ss_pred HHHHHHHhhcCCeeEEEE-ECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-----EEEecccccCCccceec
Confidence 888877765 5689999 9999999999999999999999 999999999999997 99999999999999999
Q ss_pred ccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEecccccee-
Q 001017 204 QALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF- 282 (1189)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~- 282 (1189)
.+.+.... . .+. +.+...+++...|+||.+++.+.. ..+|.+.|+|++||.+|..+
T Consensus 291 ~~~~~~~~-~-~~~-------~~~~~~~~~~~lf~GT~v~~~~~~--------------~g~g~~~~vV~~TG~~T~~G~ 347 (1054)
T TIGR01657 291 FPIPDNGD-D-DED-------LFLYETSKKHVLFGGTKILQIRPY--------------PGDTGCLAIVVRTGFSTSKGQ 347 (1054)
T ss_pred ccCCcccc-c-ccc-------ccccccccceEEEcCCEEEEEecC--------------CCCCcEEEEEEeCCccccchH
Confidence 88643100 0 000 000011222334555544431100 01356999999999999544
Q ss_pred --ccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHHH
Q 001017 283 --QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360 (1189)
Q Consensus 283 --~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (1189)
+....++...+++++.+.+++.++..+.++.+++.++. ++..+ ......
T Consensus 348 i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~-~~~~~----------------------------~~~~~~ 398 (1054)
T TIGR01657 348 LVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIE-LIKDG----------------------------RPLGKI 398 (1054)
T ss_pred HHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcC----------------------------CcHHHH
Confidence 33445556678889988888776655444333222211 11111 012337
Q ss_pred HHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEEE
Q 001017 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIK 440 (1189)
Q Consensus 361 ~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (1189)
+++++.+++.++|++||++++++...+..++ ++++++|++++.+|.||+++++|||||||||+|+|+|.+
T Consensus 399 ~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~ 468 (1054)
T TIGR01657 399 ILRSLDIITIVVPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRG 468 (1054)
T ss_pred HHHHHHHHHhhcCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEe
Confidence 8889999999999999999999999999998 889999999999999999999999999999999999999
Q ss_pred EEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcceec
Q 001017 441 CSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALP 520 (1189)
Q Consensus 441 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~ 520 (1189)
++..+....... . . . .........+..++++||++..
T Consensus 469 v~~~~~~~~~~~-------------~------------------------~-~-----~~~~~~~~~~~~~~a~C~~~~~ 505 (1054)
T TIGR01657 469 VQGLSGNQEFLK-------------I------------------------V-T-----EDSSLKPSITHKALATCHSLTK 505 (1054)
T ss_pred EecccCcccccc-------------c------------------------c-c-----cccccCchHHHHHHHhCCeeEE
Confidence 875432100000 0 0 0 0000112346778999999865
Q ss_pred cccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEE-ecCc---e--eEEEecCCCCCcceeEEEEEeeeecCCCCCceEEE
Q 001017 521 EVDEENGKISYEAESPDEAAFVIAARELGFEFYE-RTQT---S--ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV 594 (1189)
Q Consensus 521 ~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~-r~~~---~--~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv 594 (1189)
.. + ...+||.|.|+++++ |+.+.. .+.. . ..+.... ....+++++.+||+|+||||||
T Consensus 506 ~~----~---~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~~------~~~~~~il~~~pF~S~~krMsv 569 (1054)
T TIGR01657 506 LE----G---KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTDD------PPQELSIIRRFQFSSALQRMSV 569 (1054)
T ss_pred EC----C---EEecCHHHHHHHHhC---CCEEECCCCcccccccccceeccC------CCceEEEEEEEeecCCCCEEEE
Confidence 32 1 235899999999975 555433 1100 0 0011000 1257999999999999999999
Q ss_pred EEEeCC-CeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhc
Q 001017 595 IVRSEE-GTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSAD 673 (1189)
Q Consensus 595 iv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~ 673 (1189)
|++.++ +++++|+|||||.|+++|.+. ..++++.+.+++|+.+|+|||++|||++++.+++++.+ .
T Consensus 570 vv~~~~~~~~~~~~KGApE~Il~~c~~~--~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~----------~- 636 (1054)
T TIGR01657 570 IVSTNDERSPDAFVKGAPETIQSLCSPE--TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD----------L- 636 (1054)
T ss_pred EEEEcCCCeEEEEEECCHHHHHHHcCCc--CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhh----------c-
Confidence 999864 578899999999999999854 45778889999999999999999999998543222111 1
Q ss_pred HHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCC
Q 001017 674 REELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET 753 (1189)
Q Consensus 674 ~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~ 753 (1189)
.++.+|+||+|+|+++++|++|++++++|+.|++|||++||+|||++.||.+||++|||++++...+..+...
T Consensus 637 -------~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~ 709 (1054)
T TIGR01657 637 -------SRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEP 709 (1054)
T ss_pred -------cHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeeccc
Confidence 1256889999999999999999999999999999999999999999999999999999998765555443221
Q ss_pred Ccc-----cccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhcccee
Q 001017 754 PES-----KTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV 828 (1189)
Q Consensus 754 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~v 828 (1189)
.+. ..+...+....... . ...+.....-.........+.++++|++++.+.+. ..+.+.++...++
T Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~~~~~~~~-- 780 (1054)
T TIGR01657 710 PESGKPNQIKFEVIDSIPFAST----Q--VEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAH-SPELLLRLLSHTT-- 780 (1054)
T ss_pred ccCCCCceEEEEecCccccccc----c--ccccCcccccchhhhcccceEEEEEcHHHHHHHHh-hHHHHHHHHhcCe--
Confidence 100 00000000000000 0 00000000000000123456799999999876432 2234555555555
Q ss_pred EEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhhHHHHHHhhh
Q 001017 829 ICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGH 906 (1189)
Q Consensus 829 v~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l~~lll~~GR 906 (1189)
||||++|+||.++|+.+|+ .|++|+|+|||+||++|||+|||||||+++| |+.+|||++.+ |+.+..+ +.+||
T Consensus 781 VfAR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ALK~AdVGIam~~~d---as~AA~f~l~~~~~~~I~~~-I~eGR 855 (1054)
T TIGR01657 781 VFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCGALKQADVGISLSEAE---ASVAAPFTSKLASISCVPNV-IREGR 855 (1054)
T ss_pred EEEecCHHHHHHHHHHHHh-CCCeEEEEeCChHHHHHHHhcCcceeecccc---ceeecccccCCCcHHHHHHH-HHHHH
Confidence 9999999999999999998 8999999999999999999999999998765 66899999987 5558887 89999
Q ss_pred hhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhc
Q 001017 907 WCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQE 986 (1189)
Q Consensus 907 ~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~ 986 (1189)
.++.++.+++.|.+..+++..+..+...+. + .+++++|++|.|++++.+|+++++.. ++.+.+++.|+
T Consensus 856 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-~~l~~~Q~l~i~li~~~~~~l~l~~~---~p~~~l~~~~P---- 923 (1054)
T TIGR01657 856 CALVTSFQMFKYMALYSLIQFYSVSILYLI----G-SNLGDGQFLTIDLLLIFPVALLMSRN---KPLKKLSKERP---- 923 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----c-CcCccHHHHHHHHHHHHHHHHHHHcC---CchhhcCCCCC----
Confidence 999999999999998888765554433222 3 45789999999999999999999874 44455555554
Q ss_pred cccccccchhhhhhhhhhhHHHHHHHHHHHHHhhccccccCCCc-----eeehhhhhhHHHHHHHHHHHHHHHH-hccc-
Q 001017 987 GVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGE-----VIGLEILGTTMYTCVVWVVNCQMAL-SVTY- 1059 (1189)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~f~~~v~~~n~~~~l-~~~~- 1059 (1189)
...++++.++.+++++++++.++.++.+++....+++..... ........|++|....+ ..+..+. .+..
T Consensus 924 --~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~~~-~~~~~~~~~~~g~ 1000 (1054)
T TIGR01657 924 --PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSF-QYLITAIVNSKGP 1000 (1054)
T ss_pred --CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHHHHHHH-HHHHheEEEcCCc
Confidence 368999999999999999999998888776654433311110 11112335777743332 3333222 1111
Q ss_pred ---chhhHHHHHHHHHHHHHHHHH
Q 001017 1060 ---FTYIQHLFIWGGITFWYIFLL 1080 (1189)
Q Consensus 1060 ---~t~~~~~~i~~si~~~~i~~~ 1080 (1189)
..++.+..++.++++.+++++
T Consensus 1001 pf~~~~~~N~~~~~~~~~~~~~~~ 1024 (1054)
T TIGR01657 1001 PFREPIYKNKPFVYLLITGLGLLL 1024 (1054)
T ss_pred chhhhHHHhHHHHHHHHHHHHHHH
Confidence 134577777777666555554
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-97 Score=941.50 Aligned_cols=807 Identities=17% Similarity=0.183 Sum_probs=601.2
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcccc--CCC-----CCCccchhhhhhHHHHHhhH
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP--LSP-----YSAVSNVLPLVVVIGATMGK 120 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~--~~~-----~~~~~~~~~l~~vl~~s~i~ 120 (1189)
.++|+++||+|+++..+.+.+. +.+++||.+|+.++++++++++++. +.+ .+.|...+.++++++++.+.
T Consensus 51 a~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i 127 (903)
T PRK15122 51 AAERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLL 127 (903)
T ss_pred HHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHH
Confidence 4778999999999988866443 7889999999999999999999874 111 12456677778888889999
Q ss_pred HHHHHHHHhhhhHHHh---cceEEEEecC------CeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEe
Q 001017 121 EVLEDWRRKKQDIEVN---NRKVKVHCGE------GAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVET 191 (1189)
Q Consensus 121 ~~~~d~~~~~~~~~~n---~~~~~v~~r~------g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~ 191 (1189)
+++++++..++.+.+. +.+++|+ || |++++|+.++|+|||||.|++||.|||||+|++|++ +.|||
T Consensus 128 ~~~qe~~a~~a~~~L~~l~~~~~~V~-Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VDE 202 (903)
T PRK15122 128 RFWQEFRSNKAAEALKAMVRTTATVL-RRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFISQ 202 (903)
T ss_pred HHHHHHHHHHHHHHHHhccCCceEEE-ECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEc
Confidence 9999999987766554 6789999 88 489999999999999999999999999999999976 89999
Q ss_pred cCCCCCCcceeccccccc-c----cCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCC
Q 001017 192 TNLDGETNLKLKQALDAT-S----NMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTD 266 (1189)
Q Consensus 192 s~LtGEs~~~~K~~~~~~-~----~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~ 266 (1189)
|+|||||.|+.|.+.... . .....+. .+..+.....|+||.+.+|+
T Consensus 203 S~LTGES~PV~K~~~~~~~~~~~~~~~~~~~---------~~~~~~~n~vfaGT~V~~G~-------------------- 253 (903)
T PRK15122 203 AVLTGEALPVEKYDTLGAVAGKSADALADDE---------GSLLDLPNICFMGTNVVSGT-------------------- 253 (903)
T ss_pred cccCCCCcceeeecccccccccccccccccc---------CCcccccceEEeCCEEEeee--------------------
Confidence 999999999999862110 0 0000000 00001122557777777776
Q ss_pred eEEEEEEEeccccceecc---CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCC
Q 001017 267 CIYGAVIFTGRDTKVFQN---STGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDD 343 (1189)
Q Consensus 267 ~~~gvVv~tG~~Tk~~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1189)
+.++|+.||.+|.+++. ... +...+++++.++++...+..+.++++.+..++..+... .|
T Consensus 254 -~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~---------~~------ 316 (903)
T PRK15122 254 -ATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKG---------DW------ 316 (903)
T ss_pred -EEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC---------CH------
Confidence 99999999999976433 333 44568999999999888777666665554443322110 12
Q ss_pred CCCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEE
Q 001017 344 TTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTI 423 (1189)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i 423 (1189)
...+..++++++.+||++||++++++...++.++ +++++++|+.+.+|.||++|+|
T Consensus 317 --------------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~vI 372 (903)
T PRK15122 317 --------------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMDVL 372 (903)
T ss_pred --------------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCcEE
Confidence 2266778899999999999999999999999888 8899999999999999999999
Q ss_pred EeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchH
Q 001017 424 LSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHAD 503 (1189)
Q Consensus 424 ~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 503 (1189)
|||||||||+|+|++.+++..+.. . .
T Consensus 373 c~DKTGTLT~~~m~V~~~~~~~~~-----~------------------------------------------------~- 398 (903)
T PRK15122 373 CTDKTGTLTQDRIILEHHLDVSGR-----K------------------------------------------------D- 398 (903)
T ss_pred EecCCcccccCeEEEEEEEcCCCC-----C------------------------------------------------h-
Confidence 999999999999999987521100 0 0
Q ss_pred HHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeee
Q 001017 504 VIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVL 583 (1189)
Q Consensus 504 ~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~ 583 (1189)
++++...++|. .... ..+||.|.|+++++.+.|.... ...++.+..+
T Consensus 399 --~~~l~~a~l~s-~~~~----------~~~~p~e~All~~a~~~~~~~~--------------------~~~~~~~~~~ 445 (903)
T PRK15122 399 --ERVLQLAWLNS-FHQS----------GMKNLMDQAVVAFAEGNPEIVK--------------------PAGYRKVDEL 445 (903)
T ss_pred --HHHHHHHHHhC-CCCC----------CCCChHHHHHHHHHHHcCchhh--------------------hhcCceEEEe
Confidence 12233333331 1100 1479999999999987664210 1346677889
Q ss_pred cCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHH
Q 001017 584 EFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEK 654 (1189)
Q Consensus 584 ~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~ 654 (1189)
||+|.||||++++++.+|++++++|||++.|+++|... +++.++.+.+.+++++.+|+|++++|||+++.+
T Consensus 446 pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~ 525 (903)
T PRK15122 446 PFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGG 525 (903)
T ss_pred eeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcc
Confidence 99999999999999878889999999999999999642 223456677888999999999999999998754
Q ss_pred HHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHH
Q 001017 655 EYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 734 (1189)
Q Consensus 655 e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia 734 (1189)
+...+ ..+..|.|++|+|+++++||+|++++++|++|+++||+++|+|||+..||.+||
T Consensus 526 ~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA 584 (903)
T PRK15122 526 ESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKIC 584 (903)
T ss_pred ccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH
Confidence 32100 012346899999999999999999999999999999999999999999999999
Q ss_pred HHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHH
Q 001017 735 FACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDV 814 (1189)
Q Consensus 735 ~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~ 814 (1189)
+++||..+ -+++|.+++.+.++++
T Consensus 585 ~~lGI~~~--------------------------------------------------------~vi~G~el~~~~~~el 608 (903)
T PRK15122 585 REVGLEPG--------------------------------------------------------EPLLGTEIEAMDDAAL 608 (903)
T ss_pred HHcCCCCC--------------------------------------------------------CccchHhhhhCCHHHH
Confidence 99999421 0567777776655555
Q ss_pred HHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 815 KDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 815 ~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
.+... .+ .||||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ +..+.|+++||++++++
T Consensus 609 ~~~v~----~~--~VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd 680 (903)
T PRK15122 609 AREVE----ER--TVFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEK 680 (903)
T ss_pred HHHhh----hC--CEEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecC
Confidence 44443 33 39999999999999999998 8999999999999999999999999996 33444999999999985
Q ss_pred hh--hHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCC
Q 001017 895 RF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDV 972 (1189)
Q Consensus 895 ~~--l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~ 972 (1189)
++ +..+ +.+||.+|+|+++++.|.+..|+..++..++..++. +..++.+.|++|.|++++. |+++++.+. +
T Consensus 681 ~f~~Iv~a-i~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~qil~~nli~D~-~~lal~~d~--~ 753 (903)
T PRK15122 681 SLMVLEEG-VIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFI---PFLPMLAIHLLLQNLMYDI-SQLSLPWDK--M 753 (903)
T ss_pred ChHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---ccchhHHHHHHHHHHHHHH-HHHhhcCCC--C
Confidence 55 7777 899999999999999999999998877776665553 2246889999999999995 999998743 4
Q ss_pred ChHHHhhCccchhccccccccchhhhhhhhhhhHHHHHHHHHHHHHhhccccccCCCceeehhhhhhHHHHHHHHHHHHH
Q 001017 973 SARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQ 1052 (1189)
Q Consensus 973 ~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~n~~ 1052 (1189)
.++.+ +.|+ .++.+++++.+++ ....+.+.+++.|++.++.+.. |.......+.+.+|+.+++.+.+.
T Consensus 754 ~~~~m-~~P~----~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~t~~f~~l~~~q~~~ 821 (903)
T PRK15122 754 DKEFL-RKPR----KWDAKNIGRFMLW-IGPTSSIFDITTFALMWFVFAA------NSVEMQALFQSGWFIEGLLSQTLV 821 (903)
T ss_pred CHhhc-CCCC----CCChhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhcc------CcHhhhhhhHHHHHHHHHHHHHHH
Confidence 44555 7776 5667777765443 2222233333333332222210 100000124566788888877777
Q ss_pred HHH-hcccchhhHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHH
Q 001017 1053 MAL-SVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSA 1127 (1189)
Q Consensus 1053 ~~l-~~~~~t~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~ 1127 (1189)
++. ++....++.+...+..+++.++++++..++|.. .+..+|+..+.++.+|+.++.++++.++...+.|.
T Consensus 822 ~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~ 893 (903)
T PRK15122 822 VHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFS----PLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKR 893 (903)
T ss_pred HHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHH----HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 652 333223334455566666677777777777731 11226677888899999988888877777777763
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-97 Score=936.96 Aligned_cols=787 Identities=17% Similarity=0.197 Sum_probs=593.4
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccchhhhhhHHHHHhhHHHHHHHH
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWR 127 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~s~i~~~~~d~~ 127 (1189)
.++|+++||+|+++.++.+.+. +.+++||.+|++++++++++++++ .+.|...+.++++++++.+.++++++|
T Consensus 73 a~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~----~~~~~~a~~I~~iv~i~~~i~~~qe~r 145 (902)
T PRK10517 73 VESAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYA----TEDLFAAGVIALMVAISTLLNFIQEAR 145 (902)
T ss_pred HHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH----HccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4778899999999999887543 889999999999999999999988 566777788888899999999999999
Q ss_pred HhhhhHHH---hcceEEEEecC------CeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCC
Q 001017 128 RKKQDIEV---NNRKVKVHCGE------GAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGET 198 (1189)
Q Consensus 128 ~~~~~~~~---n~~~~~v~~r~------g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs 198 (1189)
..++.+.+ .+.+++|+ || |++++|++++|+|||||.|++||.|||||+|++|++ +.||||+|||||
T Consensus 146 a~~~~~~L~~l~~~~a~Vi-R~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES 220 (902)
T PRK10517 146 STKAADALKAMVSNTATVL-RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGES 220 (902)
T ss_pred HHHHHHHHHhhCCCeEEEE-ECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCC
Confidence 98775554 46889999 88 789999999999999999999999999999999976 899999999999
Q ss_pred cceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccc
Q 001017 199 NLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRD 278 (1189)
Q Consensus 199 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~ 278 (1189)
.|+.|.+++...... +.-+.+...|+||.+.+|+ +.++|+.||.+
T Consensus 221 ~PV~K~~~~~~~~~~--------------~~~~~~n~vfaGT~V~~G~---------------------~~~vV~atG~~ 265 (902)
T PRK10517 221 LPVEKFATTRQPEHS--------------NPLECDTLCFMGTNVVSGT---------------------AQAVVIATGAN 265 (902)
T ss_pred Cceeccccccccccc--------------CccccccceeeCceEeeee---------------------EEEEEEEeccc
Confidence 999999875321000 0001122457777777776 99999999999
Q ss_pred ccee---ccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHH
Q 001017 279 TKVF---QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAV 355 (1189)
Q Consensus 279 Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (1189)
|.++ .....+..+++++++.++++..++..+.++++.+.++++.+... .|
T Consensus 266 T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~---------~~------------------ 318 (902)
T PRK10517 266 TWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG---------DW------------------ 318 (902)
T ss_pred cHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC---------CH------------------
Confidence 9654 34455667789999999999998888877777666555432210 12
Q ss_pred HHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccc
Q 001017 356 AAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNS 435 (1189)
Q Consensus 356 ~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~ 435 (1189)
...+..++++++.+||++||++++++...++.+| +++++++|+++.+|.||++|+||||||||||+|+
T Consensus 319 --~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~ 386 (902)
T PRK10517 319 --WEAALFALSVAVGLTPEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDK 386 (902)
T ss_pred --HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccce
Confidence 2367778999999999999999999999999988 8899999999999999999999999999999999
Q ss_pred eEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhh
Q 001017 436 MEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAIC 515 (1189)
Q Consensus 436 m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC 515 (1189)
|.+.++.... +. . .++++...++|
T Consensus 387 m~V~~~~~~~---~~--~---------------------------------------------------~~~ll~~a~l~ 410 (902)
T PRK10517 387 IVLENHTDIS---GK--T---------------------------------------------------SERVLHSAWLN 410 (902)
T ss_pred EEEEEEecCC---CC--C---------------------------------------------------HHHHHHHHHhc
Confidence 9998763100 00 0 01234444444
Q ss_pred cceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEE
Q 001017 516 HTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVI 595 (1189)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 595 (1189)
.... . ..+||.|.|+++++...+.. .....|+.+..+||||+||||+++
T Consensus 411 ~~~~----~-------~~~~p~d~All~~a~~~~~~--------------------~~~~~~~~~~~~pFds~~k~msvv 459 (902)
T PRK10517 411 SHYQ----T-------GLKNLLDTAVLEGVDEESAR--------------------SLASRWQKIDEIPFDFERRRMSVV 459 (902)
T ss_pred CCcC----C-------CCCCHHHHHHHHHHHhcchh--------------------hhhhcCceEEEeeeCCCcceEEEE
Confidence 3221 0 14799999999988653210 012456778889999999999999
Q ss_pred EEeCCCeEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHH
Q 001017 596 VRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEA 666 (1189)
Q Consensus 596 v~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a 666 (1189)
++.+++...+++|||+|.|+++|... +++..+.+.+..++++++|+|++++|||+++.++.. +
T Consensus 460 v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~-~------- 531 (902)
T PRK10517 460 VAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGD-Y------- 531 (902)
T ss_pred EEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccc-c-------
Confidence 99877888999999999999999642 223456677788899999999999999988653210 0
Q ss_pred hhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceE
Q 001017 667 KNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ 746 (1189)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~ 746 (1189)
....|.|++|+|+++++||+|++++++|++|+++||+|+|+|||++.||.+||+++||..+.
T Consensus 532 ---------------~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~--- 593 (902)
T PRK10517 532 ---------------QRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGE--- 593 (902)
T ss_pred ---------------ccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCccC---
Confidence 01136899999999999999999999999999999999999999999999999999994210
Q ss_pred EEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccc
Q 001017 747 VIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA 826 (1189)
Q Consensus 747 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~ 826 (1189)
+++|.+++.+.++++.+... .+
T Consensus 594 -----------------------------------------------------v~~G~el~~l~~~el~~~~~----~~- 615 (902)
T PRK10517 594 -----------------------------------------------------VLIGSDIETLSDDELANLAE----RT- 615 (902)
T ss_pred -----------------------------------------------------ceeHHHHHhCCHHHHHHHHh----hC-
Confidence 56677776655545444443 23
Q ss_pred eeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHHHHHh
Q 001017 827 SVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVH 904 (1189)
Q Consensus 827 ~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~lll~~ 904 (1189)
.||+|++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ +..+.|+++||+++++.++ +..+ +.+
T Consensus 616 -~VfAr~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~a-i~~ 691 (902)
T PRK10517 616 -TLFARLTPMHKERIVTLLKR-EGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEG-VIE 691 (902)
T ss_pred -cEEEEcCHHHHHHHHHHHHH-CCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHH-HHH
Confidence 39999999999999999998 8999999999999999999999999996 3445599999999998665 7777 899
Q ss_pred hhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccch
Q 001017 905 GHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLY 984 (1189)
Q Consensus 905 GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly 984 (1189)
||.+|+|+++++.|.+..|+..++..++..++.. ..++.+.|++|.|++++ +|.++++.+ +.++.+|+.|+-+
T Consensus 692 gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~---~~pl~~~qiL~inl~~D-~~~~al~~d---~~~~~~m~~p~r~ 764 (902)
T PRK10517 692 GRRTFANMLKYIKMTASSNFGNVFSVLVASAFLP---FLPMLPLHLLIQNLLYD-VSQVAIPFD---NVDDEQIQKPQRW 764 (902)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh---hhhhHHHHHHHHHHHHH-HhHHhhcCC---CCChhhhcCCCCC
Confidence 9999999999999999999998888877666532 24689999999999999 799999874 3444455667621
Q ss_pred hccccccccchhhhhhhhhhhHHHHHHHHHHHHHhhccccccCCCceeehhhhhhHHHHHHHHHHHHHHH-Hhcccchhh
Q 001017 985 QEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMA-LSVTYFTYI 1063 (1189)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~n~~~~-l~~~~~t~~ 1063 (1189)
+... .....+..|++.+++.+..+++.+.. ++.... .....+.+.+|+.+++...+.++ .++....++
T Consensus 765 ----~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~~~~ 833 (902)
T PRK10517 765 ----NPAD----LGRFMVFFGPISSIFDILTFCLMWWV--FHANTP-ETQTLFQSGWFVVGLLSQTLIVHMIRTRRIPFI 833 (902)
T ss_pred ----CHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH--ccccch-hhHhHHHHHHHHHHHHHHHHHHHhhccCCCCcc
Confidence 1111 12223455555554433333222111 110000 00012344557777777777665 233332344
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccC--hHHHHHHHHHHHH
Q 001017 1064 QHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPA--PSFWLITLLVLMS 1117 (1189)
Q Consensus 1064 ~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~wl~~ll~~~~ 1117 (1189)
.+...|..+++.++.+++..++|.. ....+|+..+.+ +..|+.+++++.+
T Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~ 885 (902)
T PRK10517 834 QSRAAWPLMIMTLIVMAVGIALPFS----PLASYLQLQALPLSYFPWLVAILAGYM 885 (902)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhHH----HHHHhhCCcCCChhHHHHHHHHHHHHH
Confidence 5666777777777777777777721 111255555666 5677776665555
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-96 Score=932.09 Aligned_cols=793 Identities=18% Similarity=0.185 Sum_probs=593.7
Q ss_pred chhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccchhhhhhHHHHHhhHHHHHHH
Q 001017 47 SFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDW 126 (1189)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~s~i~~~~~d~ 126 (1189)
+.++|+++||+|.++.++.+.+. +.+++||..|++++++++++++++ .+.+...+.++++++++.+...++++
T Consensus 38 ev~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~p~~~iL~~~a~ls~~----~~~~~~~~iI~~iv~~~~~i~~~~e~ 110 (867)
T TIGR01524 38 EVTERLAEFGPNQTVEEKKVPNL---RLLIRAFNNPFIYILAMLMGVSYL----TDDLEATVIIALMVLASGLLGFIQES 110 (867)
T ss_pred HHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhHHHHHHHHHHHHHHH----HhhHHHHHHhhhHHHHHHHHHHHHHH
Confidence 34778999999999998865432 889999999999999999999988 56677777788888889999999999
Q ss_pred HHhhhhHHH---hcceEEEEec------CCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCC
Q 001017 127 RRKKQDIEV---NNRKVKVHCG------EGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGE 197 (1189)
Q Consensus 127 ~~~~~~~~~---n~~~~~v~~r------~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGE 197 (1189)
+..++.+.+ .+.+++|+ | ||++++|+.++|+|||||.|++||.|||||+|++|++ +.||||+||||
T Consensus 111 ~a~ka~~~L~~l~~~~~~V~-R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGE 185 (867)
T TIGR01524 111 RAERAAYALKNMVKNTATVL-RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGE 185 (867)
T ss_pred HHHHHHHHHhhhccCeeEEE-EecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCC
Confidence 887775544 46889999 8 9999999999999999999999999999999999976 89999999999
Q ss_pred CcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEecc
Q 001017 198 TNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGR 277 (1189)
Q Consensus 198 s~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~ 277 (1189)
|.|+.|.+++..... . +..+.+...|+||.+.+|+ +.++|++||.
T Consensus 186 S~PV~K~~~~~~~~~---~-----------~~~~~~n~vfaGT~v~~G~---------------------~~~~V~~tG~ 230 (867)
T TIGR01524 186 SLPVEKFVEDKRARD---P-----------EILERENLCFMGTNVLSGH---------------------AQAVVLATGS 230 (867)
T ss_pred CCcccccCCcccccc---c-----------cccccccceecCCeEEEeE---------------------EEEEEEEEcC
Confidence 999999987532100 0 0001122567777777777 9999999999
Q ss_pred cccee---ccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhH
Q 001017 278 DTKVF---QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAA 354 (1189)
Q Consensus 278 ~Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (1189)
+|.++ ..... +.+++++++.++++..++..+.++++++.++++.+... .|
T Consensus 231 ~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~---------~~----------------- 283 (867)
T TIGR01524 231 STWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG---------DW----------------- 283 (867)
T ss_pred ccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC---------CH-----------------
Confidence 99664 33444 45568999999999999988888877766554432110 12
Q ss_pred HHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCcccccc
Q 001017 355 VAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCN 434 (1189)
Q Consensus 355 ~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n 434 (1189)
...+..++++++.+||++||++++++...++.++ +++++++|+++.+|.||++++||||||||||+|
T Consensus 284 ---~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~ 350 (867)
T TIGR01524 284 ---LEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQD 350 (867)
T ss_pred ---HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccC
Confidence 2267778899999999999999999999999988 889999999999999999999999999999999
Q ss_pred ceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhh
Q 001017 435 SMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAI 514 (1189)
Q Consensus 435 ~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lal 514 (1189)
+|++.+++.... .. .++++...++
T Consensus 351 ~m~v~~~~~~~~-----~~---------------------------------------------------~~~~l~~a~l 374 (867)
T TIGR01524 351 KIELEKHIDSSG-----ET---------------------------------------------------SERVLKMAWL 374 (867)
T ss_pred eEEEEEEecCCC-----CC---------------------------------------------------HHHHHHHHHH
Confidence 999988641100 00 0123333344
Q ss_pred hcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEE
Q 001017 515 CHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV 594 (1189)
Q Consensus 515 C~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv 594 (1189)
|+... ...+||.|.|+++++.+..... ....++.+..+||+|+||||++
T Consensus 375 ~~~~~-----------~~~~~p~~~Al~~~~~~~~~~~--------------------~~~~~~~~~~~pF~s~~k~ms~ 423 (867)
T TIGR01524 375 NSYFQ-----------TGWKNVLDHAVLAKLDESAARQ--------------------TASRWKKVDEIPFDFDRRRLSV 423 (867)
T ss_pred hCCCC-----------CCCCChHHHHHHHHHHhhchhh--------------------HhhcCceEEEeccCCCcCEEEE
Confidence 33211 0136999999999987532100 1245677788999999999999
Q ss_pred EEEeCCCeEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHH
Q 001017 595 IVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTE 665 (1189)
Q Consensus 595 iv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~ 665 (1189)
+++++++..++++|||++.|+++|... +++.++.+.+.+++++.+|+|++++|||+++.++.+ +
T Consensus 424 ~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~------ 496 (867)
T TIGR01524 424 VVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-F------ 496 (867)
T ss_pred EEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-c------
Confidence 999877778899999999999999642 233456778888999999999999999998754310 0
Q ss_pred HhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCce
Q 001017 666 AKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMR 745 (1189)
Q Consensus 666 a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~ 745 (1189)
.+..|.+|+|+|+++++||+|++++++|++|+++||+++|+|||+..||.+||+++||.+++
T Consensus 497 ----------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~-- 558 (867)
T TIGR01524 497 ----------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND-- 558 (867)
T ss_pred ----------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC--
Confidence 01236899999999999999999999999999999999999999999999999999995321
Q ss_pred EEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhcc
Q 001017 746 QVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGC 825 (1189)
Q Consensus 746 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~ 825 (1189)
+++|.+++...++++.+...
T Consensus 559 ------------------------------------------------------v~~g~~l~~~~~~el~~~~~------ 578 (867)
T TIGR01524 559 ------------------------------------------------------FLLGADIEELSDEELARELR------ 578 (867)
T ss_pred ------------------------------------------------------eeecHhhhhCCHHHHHHHhh------
Confidence 45566665554444443332
Q ss_pred ceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHHHHH
Q 001017 826 ASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLV 903 (1189)
Q Consensus 826 ~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~lll~ 903 (1189)
+..||||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||+|+ +..+.|+++||+++++.++ +..+ +.
T Consensus 579 ~~~vfAr~~Pe~K~~iV~~lq~-~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~a-i~ 655 (867)
T TIGR01524 579 KYHIFARLTPMQKSRIIGLLKK-AGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEG-VI 655 (867)
T ss_pred hCeEEEECCHHHHHHHHHHHHh-CCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHH-HH
Confidence 2349999999999999999998 8999999999999999999999999996 3344499999999998555 7777 89
Q ss_pred hhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccc
Q 001017 904 HGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLL 983 (1189)
Q Consensus 904 ~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~l 983 (1189)
+||.+|+|+++++.|.+..|+..++..++..++. ...++.+.|++|.|++++ +|+++++.. +.++.+|+.|+
T Consensus 656 ~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~qil~inl~~d-~~~~al~~~---~~~~~~m~~p~- 727 (867)
T TIGR01524 656 EGRNTFGNILKYLKMTASSNFGNVFSVLVASAFI---PFLPMLSLHLLIQNLLYD-FSQLTLPWD---KMDREFLKKPH- 727 (867)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHH-HHHHhhcCC---CCChHhhCCCC-
Confidence 9999999999999999999998888777666553 224689999999999999 799999874 44444556776
Q ss_pred hhccccccccchhhhhhhhhhhHHHHHHHHHHHHHhhccccccCCCceeehhhhhhHHHHHHHHHHHHHHHH-hcccchh
Q 001017 984 YQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMAL-SVTYFTY 1062 (1189)
Q Consensus 984 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~n~~~~l-~~~~~t~ 1062 (1189)
.++.+. ....++..|++.+++.+..++..+.. +...+. .....+.+..|+.+++...+.++. ++....+
T Consensus 728 ---~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~~~ 797 (867)
T TIGR01524 728 ---QWEQKG----MGRFMLCIGPVSSIFDIATFLLMWFV--FSANTV-EEQALFQSGWFVVGLLSQTLVVHMIRTEKIPF 797 (867)
T ss_pred ---CCChhh----HHHHHHHHHHHHHHHHHHHHHHHHHH--hcccch-hhhhHHHHHHHHHHHHHHHHHHHhhCcCCCCc
Confidence 222222 22223345555444333322221111 000111 011124567788888877777652 3332234
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCcc-ccchhHHHHHHHhcc--ChHHHHHHHHHHHHHHHHHHHHH
Q 001017 1063 IQHLFIWGGITFWYIFLLAYGAMDPY-ISTTAYKVFIEACAP--APSFWLITLLVLMSSLLPYFTYS 1126 (1189)
Q Consensus 1063 ~~~~~i~~si~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~--~~~~wl~~ll~~~~~l~~~~~~k 1126 (1189)
+.+...+.++++.++++++..++|.. ++. +|+..+. .+..|+.++.++.+ +...+.|
T Consensus 798 ~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k 857 (867)
T TIGR01524 798 IQSRAAAPVMIATLLVMALGIIIPFSPLGH-----SIGLVSLPLSYFPWLIAILVGYM--ATMQLVK 857 (867)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhchhhhhh-----hhccccCCccHHHHHHHHHHHHH--HHHHHHH
Confidence 45667777778888878777787742 122 4555544 45567776665554 3344444
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-92 Score=882.01 Aligned_cols=714 Identities=19% Similarity=0.238 Sum_probs=563.7
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccchhhhhhHHHHHhhHHHHHHHH
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWR 127 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~s~i~~~~~d~~ 127 (1189)
.++|+++||+|.++..+.+.| +.+++||.+|+++.++++++++++ .+.|...+.++++++++.+.+++++++
T Consensus 7 a~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~----~~~~~~~~~i~~~~~i~~~i~~~qe~~ 78 (755)
T TIGR01647 7 AKKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIA----LENWVDFVIILGLLLLNATIGFIEENK 78 (755)
T ss_pred HHHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh----hcchhhhhhhhhhhHHHHHHHHHHHHH
Confidence 467889999999998666544 778999999999999999999998 566677777788888898999999999
Q ss_pred HhhhhHHHh---cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceecc
Q 001017 128 RKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQ 204 (1189)
Q Consensus 128 ~~~~~~~~n---~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~ 204 (1189)
..++.+.+. +.+++|+ |||++++|+.+||+|||||.|++||.|||||++++|++ +.||||+|||||.|+.|.
T Consensus 79 a~~~~~~L~~~~~~~~~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 79 AGNAVEALKQSLAPKARVL-RDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHhhCCCeEEEE-ECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEec
Confidence 988766554 6889999 99999999999999999999999999999999999986 899999999999999998
Q ss_pred cccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccceec-
Q 001017 205 ALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ- 283 (1189)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~~- 283 (1189)
+++. .|+||.+.+|+ +.++|+.||.+|.+++
T Consensus 154 ~~~~---------------------------v~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~i 185 (755)
T TIGR01647 154 TGDI---------------------------AYSGSTVKQGE---------------------AEAVVTATGMNTFFGKA 185 (755)
T ss_pred cCCe---------------------------eeccCEEEccE---------------------EEEEEEEcCCccHHHHH
Confidence 7653 39999999998 9999999999996543
Q ss_pred --cCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHHHH
Q 001017 284 --NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHF 361 (1189)
Q Consensus 284 --~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (1189)
....++..++++|+.++++..+++++.++++++.++++.+.... +| ...+
T Consensus 186 ~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~--------~~--------------------~~~~ 237 (755)
T TIGR01647 186 AALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE--------SF--------------------REGL 237 (755)
T ss_pred HHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------CH--------------------HHHH
Confidence 44556666789999999999999888888887776655431111 11 2367
Q ss_pred HHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEEEE
Q 001017 362 LTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKC 441 (1189)
Q Consensus 362 ~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~ 441 (1189)
..++.+++.+||++||++++++...++.++ +++++++|+.+.+|.||.+|+||||||||||+|+|++.++
T Consensus 238 ~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~ 307 (755)
T TIGR01647 238 QFALVLLVGGIPIAMPAVLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEI 307 (755)
T ss_pred HHHHHHHHHhCCcchHHHHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEE
Confidence 778999999999999999999999999988 8899999999999999999999999999999999999998
Q ss_pred EEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcceecc
Q 001017 442 SIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPE 521 (1189)
Q Consensus 442 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~ 521 (1189)
+..+..+. .++++...++|+..
T Consensus 308 ~~~~~~~~-------------------------------------------------------~~~~l~~a~~~~~~--- 329 (755)
T TIGR01647 308 LPFFNGFD-------------------------------------------------------KDDVLLYAALASRE--- 329 (755)
T ss_pred EecCCCCC-------------------------------------------------------HHHHHHHHHHhCCC---
Confidence 75331110 01244455555420
Q ss_pred ccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeCC-
Q 001017 522 VDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE- 600 (1189)
Q Consensus 522 ~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~- 600 (1189)
.++||.|.|+++++++.+. ....+++++.+||++.+|+|+++++.++
T Consensus 330 ----------~~~~pi~~Ai~~~~~~~~~----------------------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~ 377 (755)
T TIGR01647 330 ----------EDQDAIDTAVLGSAKDLKE----------------------ARDGYKVLEFVPFDPVDKRTEATVEDPET 377 (755)
T ss_pred ----------CCCChHHHHHHHHHHHhHH----------------------HHhcCceEEEeccCCCCCeEEEEEEeCCC
Confidence 1469999999998876430 0134677888999999999999998764
Q ss_pred CeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHH
Q 001017 601 GTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEE 680 (1189)
Q Consensus 601 ~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~ 680 (1189)
|+.++++|||++.|+++|... .+.++++.+.+++++.+|+|++++|+|+.
T Consensus 378 g~~~~~~kGa~e~il~~c~~~-~~~~~~~~~~~~~~~~~G~rvl~vA~~~~----------------------------- 427 (755)
T TIGR01647 378 GKRFKVTKGAPQVILDLCDNK-KEIEEKVEEKVDELASRGYRALGVARTDE----------------------------- 427 (755)
T ss_pred ceEEEEEeCChHHHHHhcCCc-HHHHHHHHHHHHHHHhCCCEEEEEEEEcC-----------------------------
Confidence 778899999999999999753 24567788889999999999999999731
Q ss_pred HHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccc
Q 001017 681 IAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLE 760 (1189)
Q Consensus 681 ~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~ 760 (1189)
|.+|+|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||.++. +.++.
T Consensus 428 -----e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~-----~~~~~------- 490 (755)
T TIGR01647 428 -----EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI-----YTADV------- 490 (755)
T ss_pred -----CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----cCHHH-------
Confidence 3789999999999999999999999999999999999999999999999999995420 00000
Q ss_pred hhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHH
Q 001017 761 KSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKAL 840 (1189)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~ 840 (1189)
+.+|++++...++++.+.+. .+ .+|||++|+||.+
T Consensus 491 ---------------------------------------l~~~~~~~~~~~~~~~~~~~----~~--~vfAr~~Pe~K~~ 525 (755)
T TIGR01647 491 ---------------------------------------LLKGDNRDDLPSGELGEMVE----DA--DGFAEVFPEHKYE 525 (755)
T ss_pred ---------------------------------------hcCCcchhhCCHHHHHHHHH----hC--CEEEecCHHHHHH
Confidence 11222222222223333332 23 3999999999999
Q ss_pred HHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHHHHHhhhhhhhhhhHhHHH
Q 001017 841 VTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICY 918 (1189)
Q Consensus 841 iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~ 918 (1189)
+|+.+|+ .|++|+|+|||.||+|||++|||||+|+ +..+.|+++||+++++.++ +..+ +.+||..|+|+++++.|
T Consensus 526 iV~~lq~-~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~a-i~~gR~~~~ni~k~i~~ 602 (755)
T TIGR01647 526 IVEILQK-RGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDA-ILESRKIFQRMKSYVIY 602 (755)
T ss_pred HHHHHHh-cCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999998 8999999999999999999999999996 3444599999999998655 7777 89999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhccccccccchhhh
Q 001017 919 FFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRI 998 (1189)
Q Consensus 919 ~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~ 998 (1189)
.+..|+..++..++..++.++ + +++++++|.|++.+. |++++++...+++ ++|+ ...++ ..+
T Consensus 603 ~~~~n~~~~~~~~~~~l~~~~---~-l~~~~il~~~l~~d~-~~~~l~~~~~~~~-----~~p~-------~~~~~-~~~ 664 (755)
T TIGR01647 603 RIAETIRIVFFFGLLILILNF---Y-FPPIMVVIIAILNDG-TIMTIAYDNVKPS-----KLPQ-------RWNLR-EVF 664 (755)
T ss_pred HhcccHHHHHHHHHHHHHhCc---c-hhHHHHHHHHHHHhH-hHhhccCCCCCCC-----CCCC-------ccchH-HHH
Confidence 999999887766666554433 3 899999999999995 7888887654422 3332 22232 444
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhccccc-cCCCceeehhhhhhHHHHHHHHHHHHHHH-Hhcccchhh
Q 001017 999 LGWALNGVANAAIIFFFCIHAMKQQAF-RKGGEVIGLEILGTTMYTCVVWVVNCQMA-LSVTYFTYI 1063 (1189)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~f~~~v~~~n~~~~-l~~~~~t~~ 1063 (1189)
...+..|++.++..|.++++.+...++ ...+.......+.|++|+.+++...+.++ .+++.+.|.
T Consensus 665 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~ 731 (755)
T TIGR01647 665 TMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFVTRTHGFFWS 731 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHheeccCCCCcc
Confidence 556678888888777666555431111 11111112335679999999988888775 344444443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-88 Score=785.57 Aligned_cols=818 Identities=20% Similarity=0.263 Sum_probs=589.3
Q ss_pred hhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccchhhhhhHHHHHhhHHHHHHHHH
Q 001017 49 EASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRR 128 (1189)
Q Consensus 49 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~s~i~~~~~d~~~ 128 (1189)
.+|+.-||+|.|..+..+.+ ..|+++...|++++..+..++|.. .+++.++..++++...|.+...+|.++.
T Consensus 167 ~~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~----d~Y~~YA~cI~iisv~Si~~sv~e~r~q 238 (1140)
T KOG0208|consen 167 IDRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLA----DSYYYYAFCIVIISVYSIVLSVYETRKQ 238 (1140)
T ss_pred HhHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhc----ccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 55678899999999998877 789999999999999998888887 6677778878888888888899998888
Q ss_pred hhhhHHHhc--ceEEEEecCCeEEEeecccCccccEEEecc-CCcCCccEEEeecccCCceEEEEecCCCCCCcceeccc
Q 001017 129 KKQDIEVNN--RKVKVHCGEGAFDYTKWRDLKVGDVVKVEK-DEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQA 205 (1189)
Q Consensus 129 ~~~~~~~n~--~~~~v~~r~g~~~~i~~~~l~vGDII~l~~-ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~~ 205 (1189)
.+..+++-. ..|+|+ |+|.+++|.++||+||||+.+.+ +-..|||++|++|+ |.||||+|||||.|+.|.|
T Consensus 239 s~rlr~mv~~~~~V~V~-R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-----civNEsmLTGESVPv~K~~ 312 (1140)
T KOG0208|consen 239 SIRLRSMVKFTCPVTVI-RDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-----CIVNESMLTGESVPVTKTP 312 (1140)
T ss_pred HHHHHHHhcCCceEEEE-ECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-----EEeecccccCCcccccccC
Confidence 888777764 468999 99999999999999999999999 89999999999999 9999999999999999999
Q ss_pred ccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccce---e
Q 001017 206 LDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---F 282 (1189)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~---~ 282 (1189)
.+.-.+ .....+.+...|.....|.||.+++-+... .+-+.|+|++||..|.- .
T Consensus 313 l~~~~~--------~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~---------------g~~v~a~V~RTGF~T~KGqLV 369 (1140)
T KOG0208|consen 313 LPMGTD--------SLDSITISMSTNSRHTLFCGTKVLQARAYL---------------GGPVLAMVLRTGFSTTKGQLV 369 (1140)
T ss_pred Cccccc--------cCcCeeechhhcCcceeeccceEEEeecCC---------------CCceEEEEEeccccccccHHH
Confidence 862110 011112333345566789999888644211 23389999999999944 4
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHHHHH
Q 001017 283 QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFL 362 (1189)
Q Consensus 283 ~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (1189)
++.-.++.....+-+..-+++..+.++ +++.+++..+...... ...-..++
T Consensus 370 RsilyPkP~~fkfyrds~~fi~~l~~i----a~~gfiy~~i~l~~~g-------------------------~~~~~iii 420 (1140)
T KOG0208|consen 370 RSILYPKPVNFKFYRDSFKFILFLVII----ALIGFIYTAIVLNLLG-------------------------VPLKTIII 420 (1140)
T ss_pred HhhcCCCCcccHHHHHHHHHHHHHHHH----HHHHHHHHhHhHHHcC-------------------------CCHHHHhh
Confidence 444455544555555555544444333 3333333222111110 01122678
Q ss_pred HHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEEEEE
Q 001017 363 TALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCS 442 (1189)
Q Consensus 363 ~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~ 442 (1189)
+++.++...+|.+||.++++....+..|+ ++++|.|-+++.+...|+++++|||||||||++.+++-.+.
T Consensus 421 rsLDliTi~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 421 RSLDLITIVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred hhhcEEEEecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 89999999999999999999999999998 89999999999999999999999999999999999999887
Q ss_pred EcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcceeccc
Q 001017 443 IAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEV 522 (1189)
Q Consensus 443 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~ 522 (1189)
.-...-..+ .+. ....+.... .+. .+. .+ ........+..++|.||+.....
T Consensus 491 ~~~~~~~~~-~~~--~~~~~~~~~------------------~~~--~l~----~~-~~~~~~~~~~~a~atCHSL~~v~ 542 (1140)
T KOG0208|consen 491 PVERNVDDG-PEL--KVVTEDSLQ------------------LFY--KLS----LR-SSSLPMGNLVAAMATCHSLTLVD 542 (1140)
T ss_pred ecccccccc-chh--hhhhhhhcc------------------cee--ecc----cc-ccCCchHHHHHHHhhhceeEEeC
Confidence 533221110 000 000000000 000 000 00 00111346888999999886643
Q ss_pred cCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecC--------c---eeEEEecC---CCCCcceeEEEEEeeeecCCCC
Q 001017 523 DEENGKISYEAESPDEAAFVIAARELGFEFYERTQ--------T---SISVHELD---PVTGTKVERSYSLLNVLEFSSS 588 (1189)
Q Consensus 523 ~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~--------~---~~~v~~~~---~~~~~~~~~~~~il~~~~F~s~ 588 (1189)
+. ..++|.|.-+++ ..|+.+++.+. + ...++... +...+...+.+-+++.+||+|.
T Consensus 543 g~-------l~GDPLdlkmfe---~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~ 612 (1140)
T KOG0208|consen 543 GT-------LVGDPLDLKMFE---STGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSA 612 (1140)
T ss_pred Ce-------eccCceeeeeee---ccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchh
Confidence 22 246888877765 45677655210 1 11222221 1111112237899999999999
Q ss_pred CceEEEEEEeC-CCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHh
Q 001017 589 RKRMSVIVRSE-EGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAK 667 (1189)
Q Consensus 589 rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~ 667 (1189)
-+||||||.++ +.+..+|+|||||.|.+.|+++ .+++++++.++.|+.+|+|++++|+|+++.. .|.+
T Consensus 613 LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~------ 681 (1140)
T KOG0208|consen 613 LRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--TVPADYQEVLKEYTHQGFRVIALASKELETS---TLQK------ 681 (1140)
T ss_pred hheEEEEEecCCCCceEeeccCCHHHHHHhcCcc--cCCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHH------
Confidence 99999999987 4678999999999999999876 6788999999999999999999999999865 2322
Q ss_pred hhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEE
Q 001017 668 NSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 747 (1189)
Q Consensus 668 ~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~ 747 (1189)
.....++.+|.||+|+|++.+|++||++++.+|+.|++|.|+++|+|||+..||+.+|++||++.+....+
T Consensus 682 ---------~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~ 752 (1140)
T KOG0208|consen 682 ---------AQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVI 752 (1140)
T ss_pred ---------HhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEE
Confidence 12234578999999999999999999999999999999999999999999999999999999999988777
Q ss_pred EEeCCCCccc-----ccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHH
Q 001017 748 IISSETPESK-----TLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA 822 (1189)
Q Consensus 748 ~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~ 822 (1189)
....+.++.. ++...+........ ..............+.-....+.+.++|+.+..+. .+..+.+.+++
T Consensus 753 ~~~~~~~~~~~~~~i~w~~ve~~~~~~~~----~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~~Il 827 (1140)
T KOG0208|consen 753 IPELEPPEDDSIAQIVWLCVESQTQFLDP----KEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVPKIL 827 (1140)
T ss_pred EEeccCCccCCCceeEEEEccCccccCCC----CccCccccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHHHHH
Confidence 6654422211 11100000000000 00000000000000111345689999999999888 45667777777
Q ss_pred hccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccc--cchhhHHH
Q 001017 823 IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA--QFRFLERL 900 (1189)
Q Consensus 823 ~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~--~f~~l~~l 900 (1189)
..+. |||||+|.||+++|+.+|+ .|..|+|||||+|||+||++|||||+++.+| |.-||.|.-. +.+....+
T Consensus 828 ~~~~--VfARMsP~qK~~Lie~lQk-l~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~v 901 (1140)
T KOG0208|consen 828 LKGT--VFARMSPDQKAELIEALQK-LGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDV 901 (1140)
T ss_pred hcCe--EEeecCchhHHHHHHHHHh-cCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHH
Confidence 7777 9999999999999999999 8999999999999999999999999998888 7889999988 45556666
Q ss_pred HHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhC
Q 001017 901 LLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKF 980 (1189)
Q Consensus 901 ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~ 980 (1189)
+.+||..+..-...++|...+.++ +|...++. +.-...+++.|.++.+++....-+++++.++ +..+.....
T Consensus 902 -IrEGRaALVTSf~~FkYMalYs~i----qFisv~~L-Y~~~~nl~D~Qfl~iDLlii~pia~~m~~~~--a~~~L~~~r 973 (1140)
T KOG0208|consen 902 -IREGRAALVTSFACFKYMALYSAI----QFISVVFL-YLINSNLGDLQFLFIDLLIITPIAVMMSRFD--ASDKLFPKR 973 (1140)
T ss_pred -HhhhhhhhhhhHHHHHHHHHHHHH----HHHhhhee-eeecccccchhhhhhHHHHHHHHHHHHccCc--HHHHhcCCC
Confidence 899999988888888777554433 33333322 2233457889999999988766666666553 444433333
Q ss_pred ccchhccccccccchhhhhhhhhhhHHHHHHHHHHHHHhhcccccc
Q 001017 981 PLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFR 1026 (1189)
Q Consensus 981 P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1189)
| ...+++.+.+...+++.++..++-+..++.....+++.
T Consensus 974 P-------~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~ 1012 (1140)
T KOG0208|consen 974 P-------PTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYE 1012 (1140)
T ss_pred C-------CccccccchhhhhHHHHHHHHHHHHhhheeecccccee
Confidence 3 46788888888888888877777777766655555553
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-89 Score=785.79 Aligned_cols=877 Identities=20% Similarity=0.231 Sum_probs=670.3
Q ss_pred hhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcccc--CCC-------CCCccchhhhhhHHHHHhh
Q 001017 49 EASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP--LSP-------YSAVSNVLPLVVVIGATMG 119 (1189)
Q Consensus 49 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~--~~~-------~~~~~~~~~l~~vl~~s~i 119 (1189)
.+++.+-|+|..+.+|.+.-+ ..+.+|+...+.+.++++++++++. +.+ .......+.|+.+++++.+
T Consensus 65 ~~~L~rdG~NaL~Ppk~t~~w---ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~ 141 (1019)
T KOG0203|consen 65 AEKLARDGPNALTPPKTTPEW---IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGL 141 (1019)
T ss_pred HhhhccCCCCCCCCCCCChHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEec
Confidence 567889999999999977632 4577899999999999999999875 111 1122234556666777777
Q ss_pred HHHHHHHHHhhhh---HHHhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCC
Q 001017 120 KEVLEDWRRKKQD---IEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDG 196 (1189)
Q Consensus 120 ~~~~~d~~~~~~~---~~~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtG 196 (1189)
-.++++.+..+-. +.+-++.++|+ |||....+..++|+|||+|.++-|+++|||++++++.+ |+||+|+|||
T Consensus 142 ~~~~qe~ks~~im~sF~~l~P~~~~Vi-Rdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTG 216 (1019)
T KOG0203|consen 142 FSYYQEAKSSKIMDSFKNLVPQQALVI-RDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTG 216 (1019)
T ss_pred CCCccchhhHHHHHHHhccchhhheee-ecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEecccccc
Confidence 7777776655443 34447899999 99999999999999999999999999999999999998 9999999999
Q ss_pred CCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEec
Q 001017 197 ETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTG 276 (1189)
Q Consensus 197 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG 276 (1189)
|+.|..+.+.....+..+..+ ..|.+|.+++|. ++|+|++||
T Consensus 217 esEP~~~~~~~t~~~~~Et~N-----------------i~f~st~~veG~---------------------~~givi~tG 258 (1019)
T KOG0203|consen 217 ESEPQTRSPEFTHENPLETRN-----------------IAFFSTNCVEGT---------------------GRGIVIATG 258 (1019)
T ss_pred ccCCccCCccccccCchhhee-----------------eeeeeeEEecce---------------------EEEEEEecC
Confidence 999998887543322111222 458999999998 999999999
Q ss_pred cccceeccCC---CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhh
Q 001017 277 RDTKVFQNST---GPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRA 353 (1189)
Q Consensus 277 ~~Tk~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (1189)
.+|.++..+. .....++++++.+++++.++..+.+++.+..+++...... .|
T Consensus 259 d~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy---------~~---------------- 313 (1019)
T KOG0203|consen 259 DRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY---------EW---------------- 313 (1019)
T ss_pred CceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc---------hh----------------
Confidence 9998865543 4466789999999999999998888887777765544321 12
Q ss_pred HHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccc
Q 001017 354 AVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (1189)
Q Consensus 354 ~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~ 433 (1189)
+..+...+.++++.+|.+|+++++.....-+++| +++++++|++.+.|.||...+||+|||||||+
T Consensus 314 ----l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTq 379 (1019)
T KOG0203|consen 314 ----LRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 379 (1019)
T ss_pred ----HHHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEe
Confidence 3355558888999999999999999999999998 89999999999999999999999999999999
Q ss_pred cceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHh
Q 001017 434 NSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLA 513 (1189)
Q Consensus 434 n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la 513 (1189)
|.|+|.++|.++........+. .++. .....+.....+.++..
T Consensus 380 nrMtVahlw~d~~i~~~d~~~~------~~~~-------------------------------~~~~~~~~~~~l~r~~~ 422 (1019)
T KOG0203|consen 380 NRMTVAHLWFDNQIHEADTTED------QSGQ-------------------------------SFDKSSATFIALSRIAT 422 (1019)
T ss_pred cceEEEeeccCCceeeeechhh------hhcc-------------------------------cccccCchHHHHHHHHH
Confidence 9999999998776543222110 0000 00111344668899999
Q ss_pred hhcceeccccCCCCc--EEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCce
Q 001017 514 ICHTALPEVDEENGK--ISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKR 591 (1189)
Q Consensus 514 lC~~~~~~~~~~~~~--~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkr 591 (1189)
+||.+.....+..-. -.-..+++.|.||++++.-.-... ...++.++.+..+||+|.+|.
T Consensus 423 lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~------------------~~~R~~~~kv~eipfNSt~Ky 484 (1019)
T KOG0203|consen 423 LCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV------------------MELRERNPKVAEIPFNSTNKY 484 (1019)
T ss_pred HhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH------------------HHHHHhhHHhhcCCcccccce
Confidence 999998764432111 112358999999999987532211 123467788899999999999
Q ss_pred EEEEEEeCC---CeEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHH
Q 001017 592 MSVIVRSEE---GTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQF 659 (1189)
Q Consensus 592 msviv~~~~---~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~ 659 (1189)
.-.+.+..+ .+..+.+|||||.++++|+-. ++...+.+.+...++...|-||+.||++.++++++.+.
T Consensus 485 qlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~ 564 (1019)
T KOG0203|consen 485 QLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRG 564 (1019)
T ss_pred EEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCc
Confidence 999998865 578999999999999999642 45567888888999999999999999999998876533
Q ss_pred HHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 660 NEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 660 ~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
..-..+.. +.--.++.|+|++++-||+|..+|+++..+|.|||||.|+|||++.||.+||++.||
T Consensus 565 ~~f~~d~~---------------n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgI 629 (1019)
T KOG0203|consen 565 FQFDTDDV---------------NFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGI 629 (1019)
T ss_pred eEeecCCC---------------CCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheee
Confidence 21111000 122368999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHH
Q 001017 740 LRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFL 819 (1189)
Q Consensus 740 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~ 819 (1189)
+..+...... +..+......+. +.....+.++.|.+|..+.++++.+.+
T Consensus 630 i~~~~et~e~--------------------------~a~r~~~~v~~v----n~~~a~a~VihG~eL~~~~~~qld~il- 678 (1019)
T KOG0203|consen 630 ISEGSETVED--------------------------IAKRLNIPVEQV----NSRDAKAAVIHGSELPDMSSEQLDELL- 678 (1019)
T ss_pred ecCCchhhhh--------------------------hHHhcCCccccc----CccccceEEEecccccccCHHHHHHHH-
Confidence 8755322110 000110000011 123356899999999987776555444
Q ss_pred HHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEec--CCcchhhhhccccccccchh-
Q 001017 820 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQFRF- 896 (1189)
Q Consensus 820 ~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~--g~~~~~a~~~sD~~i~~f~~- 896 (1189)
......||||.||+||..||+..|+ .|.+|..+|||.||+|||+.|||||||+ |++. +++|||++++|++|
T Consensus 679 ---~nh~eIVFARTSPqQKLiIVe~cQr-~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKqAADmILLDDNFA 752 (1019)
T KOG0203|consen 679 ---QNHQEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFA 752 (1019)
T ss_pred ---HhCCceEEEecCccceEEeEhhhhh-cCcEEEEeCCCcCCChhhcccccceeeccccchH--HHhhcceEEecCcch
Confidence 3456689999999999999999999 8999999999999999999999999884 5554 89999999999777
Q ss_pred -hHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccc-hhhHHHHHHHHHHhhHHHHhhhhcccCCCh
Q 001017 897 -LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPV-YNDWFLSLYNVFFTSLPVIALGVFDQDVSA 974 (1189)
Q Consensus 897 -l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~-~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~ 974 (1189)
++.- +.+||.+|+|++|.|.|.+..|+..+.+.++|.++ |.|+ +..+.++.+++..+++|++.++++. +.+
T Consensus 753 SIVtG-VEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~----giPLplgtitIL~IDLgTDmvPAiSLAYE~--aEs 825 (1019)
T KOG0203|consen 753 SIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILF----GIPLPLGTVTILCIDLGTDIVPAISLAYEK--AES 825 (1019)
T ss_pred hheee-cccceehhhhHHHHHHHHHHhcchhHhHHHHHHHh----CCCcccchhhhhhhHhhcccchhhhHhccC--chh
Confidence 5444 78999999999999999999999999999988877 4455 7889999999999999999999863 555
Q ss_pred HHHhhCccchhccccccccchhhh-hhhhhhhHHHHHHHHHHHHHhhccccc---------------------cCCCcee
Q 001017 975 RFCLKFPLLYQEGVQNILFSWTRI-LGWALNGVANAAIIFFFCIHAMKQQAF---------------------RKGGEVI 1032 (1189)
Q Consensus 975 ~~~~~~P~ly~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~g~~~ 1032 (1189)
+.+.+.|+ .+..+++.|.+.+ +.+...|.+|++..|+.++..++...| .+.|+..
T Consensus 826 DIM~r~PR---~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeW 902 (1019)
T KOG0203|consen 826 DIMLRPPR---NPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEW 902 (1019)
T ss_pred hHHhcCCC---CCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccc
Confidence 66667776 3467789998874 677889999999999988887765444 1224433
Q ss_pred ehh-------hhhhHHHHHHHHHHHHHHHH-hcccch----hhHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHH
Q 001017 1033 GLE-------ILGTTMYTCVVWVVNCQMAL-SVTYFT----YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEA 1100 (1189)
Q Consensus 1033 ~~~-------~~~~~~f~~~v~~~n~~~~l-~~~~~t----~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~ 1100 (1189)
+.. ...+..|.++++++-..+++ .++.-+ -+.++.+++++++-.++..++++.|+. .. .++.
T Consensus 903 tyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~-~~-----~l~~ 976 (1019)
T KOG0203|consen 903 TYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGV-LY-----ALGM 976 (1019)
T ss_pred cHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccH-HH-----Hhcc
Confidence 322 22333344444444333332 222223 245667777777777777788888863 21 5667
Q ss_pred hccChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 001017 1101 CAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFF 1133 (1189)
Q Consensus 1101 ~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~~~ 1133 (1189)
.++.+.+|+..+..++..++.+++.|++.|.+-
T Consensus 977 ~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P 1009 (1019)
T KOG0203|consen 977 YPLKFQWWLVAFPFGILIFVYDEVRKLFIRRYP 1009 (1019)
T ss_pred CCCCcEEEEecccceeeeeeHHHHHhHhhhhCC
Confidence 788899999999999999999999999988663
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-75 Score=701.65 Aligned_cols=590 Identities=19% Similarity=0.226 Sum_probs=441.0
Q ss_pred HHHHHHHHHHHHHHHHhcccc--CCC---C-CC--ccch---hhhhhHHHHHhhHHHHHHHHHhhhhHHHh---cc-eEE
Q 001017 77 EQFRRVANVYFLICAILSFTP--LSP---Y-SA--VSNV---LPLVVVIGATMGKEVLEDWRRKKQDIEVN---NR-KVK 141 (1189)
Q Consensus 77 ~qf~~~~~~~fl~~~il~~~~--~~~---~-~~--~~~~---~~l~~vl~~s~i~~~~~d~~~~~~~~~~n---~~-~~~ 141 (1189)
.+|++|..+.++++++++++. +.. . ++ +..+ +.+++.++++.+.|.+.++|..++.+.+. +. +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 478899999999999999864 111 0 11 1122 22222333344444555666666655554 33 576
Q ss_pred -EEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceecccccccccCCCcccccc
Q 001017 142 -VHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQN 220 (1189)
Q Consensus 142 -v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 220 (1189)
|. |||++++|+.++|+|||+|.|++||.|||||++++|+ +.||||+|||||.|+.|.++.+.
T Consensus 108 ~v~-rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~-----~~VDESaLTGES~PV~K~~g~d~----------- 170 (673)
T PRK14010 108 RIK-QDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGL-----ATVDESAITGESAPVIKESGGDF----------- 170 (673)
T ss_pred EEE-eCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcc-----eEEecchhcCCCCceeccCCCcc-----------
Confidence 56 8999999999999999999999999999999999997 89999999999999999987211
Q ss_pred ceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccce---eccCCCCCCCCcHHHH
Q 001017 221 FKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVER 297 (1189)
Q Consensus 221 ~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~---~~~~~~~~~k~s~l~~ 297 (1189)
...|+||.+.+|. +.++|+.||.+|.+ ....+.++.+++|+|.
T Consensus 171 -------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~ 216 (673)
T PRK14010 171 -------------DNVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNEI 216 (673)
T ss_pred -------------CeeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHHH
Confidence 0259999999988 99999999999955 4445667778899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHHHHHHHHHHHhccccchhH
Q 001017 298 RMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLY 377 (1189)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~ 377 (1189)
.+..+...+.++.+++ +.++.. +.. |. .....+...+.+.+++||++|+
T Consensus 217 ~l~~l~~~l~ii~l~~--~~~~~~-~~~------------~~----------------~~~~~~~~~val~V~~IP~aL~ 265 (673)
T PRK14010 217 ALFTLLMTLTIIFLVV--ILTMYP-LAK------------FL----------------NFNLSIAMLIALAVCLIPTTIG 265 (673)
T ss_pred HHHHHHHHHhHHHHHH--HHHHHH-HHh------------hc----------------cHHHHHHHHHHHHHHhhhhhHH
Confidence 7766544433222211 111110 000 00 0011345566667778999999
Q ss_pred HHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEEEEEEcCeecCCCchHHHH
Q 001017 378 VSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVER 457 (1189)
Q Consensus 378 v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~ 457 (1189)
..++++...++.++ .++++++|+.+.+|.||++|++|||||||||+|++.+..+...+.
T Consensus 266 ~~~~~~~~~g~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~----------- 324 (673)
T PRK14010 266 GLLSAIGIAGMDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS----------- 324 (673)
T ss_pred HHHHHHHHHHHHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC-----------
Confidence 99999998888888 899999999999999999999999999999998777665431100
Q ss_pred HHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChh
Q 001017 458 AMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537 (1189)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~ 537 (1189)
...++++...++|+.. +.||.
T Consensus 325 ---------------------------------------------~~~~~ll~~a~~~~~~--------------s~~P~ 345 (673)
T PRK14010 325 ---------------------------------------------SSFERLVKAAYESSIA--------------DDTPE 345 (673)
T ss_pred ---------------------------------------------ccHHHHHHHHHHhcCC--------------CCChH
Confidence 0012355566667532 35999
Q ss_pred HHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHH
Q 001017 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFER 617 (1189)
Q Consensus 538 e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~ 617 (1189)
+.|+++++++.|+.... .....+||++++|+|++.+. ++ .+.|||++.++++
T Consensus 346 ~~AIv~~a~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~ 397 (673)
T PRK14010 346 GRSIVKLAYKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKR 397 (673)
T ss_pred HHHHHHHHHHcCCCchh-----------------------hhcceeccccccceeEEEEC---CE--EEEECCHHHHHHH
Confidence 99999999887653210 01123799999999999753 33 4569999999999
Q ss_pred hhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeee
Q 001017 618 LAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAV 697 (1189)
Q Consensus 618 ~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~i 697 (1189)
|...+...+.++.+..++++++|+|+++++ .|++++|++++
T Consensus 398 ~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~---------------------------------------~~~~~lG~i~l 438 (673)
T PRK14010 398 VKEAGGHIPVDLDALVKGVSKKGGTPLVVL---------------------------------------EDNEILGVIYL 438 (673)
T ss_pred hhhcCCCCchHHHHHHHHHHhCCCeEEEEE---------------------------------------ECCEEEEEEEe
Confidence 976544444556777788999999999987 47789999999
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHH
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1189)
+|++|+|++++|++||++||+++|+|||++.||.+||+++|+.+
T Consensus 439 ~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~------------------------------------ 482 (673)
T PRK14010 439 KDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR------------------------------------ 482 (673)
T ss_pred ecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce------------------------------------
Confidence 99999999999999999999999999999999999999999832
Q ss_pred HHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEc
Q 001017 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 857 (1189)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iG 857 (1189)
+++|++|+||.++|+.+|+ .|+.|+|+|
T Consensus 483 ---------------------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtG 510 (673)
T PRK14010 483 ---------------------------------------------------FVAECKPEDKINVIREEQA-KGHIVAMTG 510 (673)
T ss_pred ---------------------------------------------------EEcCCCHHHHHHHHHHHHh-CCCEEEEEC
Confidence 8999999999999999998 899999999
Q ss_pred CCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHh
Q 001017 858 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEA 935 (1189)
Q Consensus 858 DG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~ 935 (1189)
||.||+|+|++|||||+|+ +..+.|+++||+++++.++ +..+ +.+||..|.++++++.|.+..|+...+..+...|
T Consensus 511 DGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 511 DGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 9999999999999999996 4444599999999998665 7777 8999999999999999999999988877766555
Q ss_pred hcccccccchhh----------HHHHHHHHHHh--hHHHHhhhhcccCCChHHHhh-Cccchh
Q 001017 936 YASFSGQPVYND----------WFLSLYNVFFT--SLPVIALGVFDQDVSARFCLK-FPLLYQ 985 (1189)
Q Consensus 936 ~~~~sg~~~~~~----------~~~l~~n~i~~--~lp~~~l~~~~~~~~~~~~~~-~P~ly~ 985 (1189)
...+.....++- ..-+.||.+.. .+|.-.-|+..++.+...+++ +--.|.
T Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (673)
T PRK14010 589 MAAMPAMNHLNIMHLHSPESAVLSALIFNALIIVLLIPIAMKGVKFKGASTQTILMKNMLVYG 651 (673)
T ss_pred HHhcccchhhccccCCChHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHhhCeEEec
Confidence 443333222221 22345565432 244445566666666655443 344443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-74 Score=695.31 Aligned_cols=594 Identities=20% Similarity=0.229 Sum_probs=452.9
Q ss_pred HHHHHHHHHHHHHHHHhcccc-CCCC------CC---ccchhhhhhHHHHHhhHHHHHHHHHhhhhHHHh---cc-eEEE
Q 001017 77 EQFRRVANVYFLICAILSFTP-LSPY------SA---VSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVN---NR-KVKV 142 (1189)
Q Consensus 77 ~qf~~~~~~~fl~~~il~~~~-~~~~------~~---~~~~~~l~~vl~~s~i~~~~~d~~~~~~~~~~n---~~-~~~v 142 (1189)
.||++|..+.++++++++++. +.+. .+ +...+.+++.++++...|.+.++|.+++.+.+. +. .++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 489999999999999999874 1110 11 222244455555666677788888877766655 33 6999
Q ss_pred EecCCe-EEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceecccccccccCCCccccccc
Q 001017 143 HCGEGA-FDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNF 221 (1189)
Q Consensus 143 ~~r~g~-~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~ 221 (1189)
+ |+|+ +++|+.++|++||+|.|++||.|||||++++|. +.||||+|||||.|+.|.+++..
T Consensus 109 i-r~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-----a~VDESaLTGES~PV~K~~G~~~------------ 170 (679)
T PRK01122 109 L-REPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-----ASVDESAITGESAPVIRESGGDF------------ 170 (679)
T ss_pred E-ECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-----EEEEcccccCCCCceEeCCCCcc------------
Confidence 9 8887 899999999999999999999999999999997 89999999999999999987542
Q ss_pred eEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccce---eccCCCCCCCCcHHHHH
Q 001017 222 KAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERR 298 (1189)
Q Consensus 222 ~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~---~~~~~~~~~k~s~l~~~ 298 (1189)
...|+||.+.+|. +.+.|+.+|.+|.+ ....+.++.+++|+|..
T Consensus 171 ------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~a 217 (679)
T PRK01122 171 ------------SSVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPNEIA 217 (679)
T ss_pred ------------CeEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHHHHH
Confidence 1359999999998 99999999999955 44456667778999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHHHHHHHHHHHhccccchhHH
Q 001017 299 MDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYV 378 (1189)
Q Consensus 299 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v 378 (1189)
++.+...++.+.++++++.+.+. +|... . ..+...+++++++|||+|+.
T Consensus 218 l~~l~~~l~~i~l~~~~~~~~~~-~~~g~--------~----------------------~~l~~~iallV~aiP~alg~ 266 (679)
T PRK01122 218 LTILLAGLTIIFLLVVATLPPFA-AYSGG--------A----------------------LSITVLVALLVCLIPTTIGG 266 (679)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHH-HHhCc--------h----------------------HHHHHHHHHHHHcccchhhh
Confidence 88877666554444333322221 11100 0 15666788899999999998
Q ss_pred HHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEEEEEEcCeecCCCchHHHHH
Q 001017 379 SIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERA 458 (1189)
Q Consensus 379 ~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~ 458 (1189)
.++.+...++.++ .++++++|+...+|.||++|++|||||||||+|+|++.+++..+.. .
T Consensus 267 l~~~i~i~g~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~-----~----- 326 (679)
T PRK01122 267 LLSAIGIAGMDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV-----T----- 326 (679)
T ss_pred HHHHHHHHHHHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC-----C-----
Confidence 8888888888888 8999999999999999999999999999999999999887532110 0
Q ss_pred HHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhH
Q 001017 459 MARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDE 538 (1189)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e 538 (1189)
.++++...++|+.. +.||..
T Consensus 327 ----------------------------------------------~~~ll~~a~~~s~~--------------s~hP~~ 346 (679)
T PRK01122 327 ----------------------------------------------EEELADAAQLSSLA--------------DETPEG 346 (679)
T ss_pred ----------------------------------------------HHHHHHHHHHhcCC--------------CCCchH
Confidence 12355566666543 358999
Q ss_pred HHHHHHHHH-CCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHH
Q 001017 539 AAFVIAARE-LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFER 617 (1189)
Q Consensus 539 ~alv~~a~~-~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~ 617 (1189)
.|+++++++ .+.... ...++..+..||++.+|+|++.+ +| ..|+|||++.+++.
T Consensus 347 ~AIv~~a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~ 401 (679)
T PRK01122 347 RSIVVLAKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRY 401 (679)
T ss_pred HHHHHHHHhhcCCCch--------------------hhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHH
Confidence 999999986 333210 01244566789999998888765 24 57899999999999
Q ss_pred hhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeee
Q 001017 618 LAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAV 697 (1189)
Q Consensus 618 ~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~i 697 (1189)
|...+.+.++++.+.+++++++|+|++++| .|++++|++++
T Consensus 402 ~~~~g~~~~~~~~~~~~~~a~~G~~~l~va---------------------------------------~~~~~lG~i~l 442 (679)
T PRK01122 402 VESNGGHFPAELDAAVDEVARKGGTPLVVA---------------------------------------EDNRVLGVIYL 442 (679)
T ss_pred HHhcCCcChHHHHHHHHHHHhCCCcEEEEE---------------------------------------ECCeEEEEEEE
Confidence 976655566778888899999999999999 46789999999
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHH
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1189)
+|++|+|++++|++||++||+++|+|||++.||.+||+++|+.+
T Consensus 443 ~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------------------------------------ 486 (679)
T PRK01122 443 KDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------------------ 486 (679)
T ss_pred eccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE------------------------------------
Confidence 99999999999999999999999999999999999999999831
Q ss_pred HHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEc
Q 001017 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 857 (1189)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iG 857 (1189)
+++|++|+||.++|+.+|+ .|+.|+|+|
T Consensus 487 ---------------------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtG 514 (679)
T PRK01122 487 ---------------------------------------------------FLAEATPEDKLALIRQEQA-EGRLVAMTG 514 (679)
T ss_pred ---------------------------------------------------EEccCCHHHHHHHHHHHHH-cCCeEEEEC
Confidence 8999999999999999998 899999999
Q ss_pred CCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHH---HHHH
Q 001017 858 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGF---TLFF 932 (1189)
Q Consensus 858 DG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~---~~~~ 932 (1189)
||.||+|||++|||||+|+ +..+.|+++||+++++.++ +..+ +.+||.....-..+..|++.-.++-.+ +.++
T Consensus 515 DGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~a-v~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~ 592 (679)
T PRK01122 515 DGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEV-VEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMF 592 (679)
T ss_pred CCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999996 4444499999999998665 7777 899999997777777888765554333 4444
Q ss_pred HHhhcccccc------cchhh-HHHHHHHHHHh--hHHHHhhhhcccCCChHHHh-hCccchhc
Q 001017 933 FEAYASFSGQ------PVYND-WFLSLYNVFFT--SLPVIALGVFDQDVSARFCL-KFPLLYQE 986 (1189)
Q Consensus 933 ~~~~~~~sg~------~~~~~-~~~l~~n~i~~--~lp~~~l~~~~~~~~~~~~~-~~P~ly~~ 986 (1189)
...|.+...- ++.+. ..-+.||.+.. .+|.-.-|+..++.+...++ |+--+|..
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (679)
T PRK01122 593 AATYPQLNALNIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYRPLSAAALLRRNLLIYGL 656 (679)
T ss_pred HhhCccccccccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCccccccCHHHHHhhceeEecC
Confidence 4333221111 11111 22355665442 24545556666666665544 34444543
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-71 Score=666.88 Aligned_cols=595 Identities=19% Similarity=0.229 Sum_probs=451.0
Q ss_pred HHHHHHHHHHHHHHHHhcccc-CCC-------C--CCccch--hhhhhHHHHHhhHHHHHHHHHhhhhHHHhc---c-eE
Q 001017 77 EQFRRVANVYFLICAILSFTP-LSP-------Y--SAVSNV--LPLVVVIGATMGKEVLEDWRRKKQDIEVNN---R-KV 140 (1189)
Q Consensus 77 ~qf~~~~~~~fl~~~il~~~~-~~~-------~--~~~~~~--~~l~~vl~~s~i~~~~~d~~~~~~~~~~n~---~-~~ 140 (1189)
.||++|..+.++++++++++. +.+ . .|+... +.+++.++++...|.+.++|.+++.+.+.+ . .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 488999999999999998874 211 1 123221 334444566667788888888888776653 3 47
Q ss_pred EEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceecccccccccCCCcccccc
Q 001017 141 KVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQN 220 (1189)
Q Consensus 141 ~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 220 (1189)
+|+++||++++|+.++|++||+|.|++||.|||||++++|+ +.||||+|||||.|+.|.+++...
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-----~~VDESaLTGES~PV~K~~g~~~~---------- 172 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-----ASVDESAITGESAPVIKESGGDFA---------- 172 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-----EEEEcccccCCCCceeecCCCCcc----------
Confidence 78734899999999999999999999999999999999997 899999999999999999875421
Q ss_pred ceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccce---eccCCCCCCCCcHHHH
Q 001017 221 FKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVER 297 (1189)
Q Consensus 221 ~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~---~~~~~~~~~k~s~l~~ 297 (1189)
..|+||.+.+|. +.++|+.+|.+|.+ ....+.++.+++|+|.
T Consensus 173 --------------~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~ 217 (675)
T TIGR01497 173 --------------SVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTPNEI 217 (675)
T ss_pred --------------eeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCChHHH
Confidence 258999999888 99999999999954 4445667777899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHHHHHHHHHHHhccccchhH
Q 001017 298 RMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLY 377 (1189)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~ 377 (1189)
.++.+...+.++.++++++.+. +..|.. . ...+...+++++++||++|+
T Consensus 218 ~l~~l~~~l~~v~li~~~~~~~-~~~~~~----------------------------~--~~~~~~lvallV~aiP~aLg 266 (675)
T TIGR01497 218 ALTILLIALTLVFLLVTATLWP-FAAYGG----------------------------N--AISVTVLVALLVCLIPTTIG 266 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhcC----------------------------h--hHHHHHHHHHHHHhCchhhh
Confidence 8888766554443333222111 111110 0 01345557889999999887
Q ss_pred HHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEEEEEEcCeecCCCchHHHH
Q 001017 378 VSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVER 457 (1189)
Q Consensus 378 v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~ 457 (1189)
...+.+...++.++ .++++++|+...+|.||++|++|||||||||+|+|++.+++..+..
T Consensus 267 ~l~~av~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~---------- 326 (675)
T TIGR01497 267 GLLSAIGIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV---------- 326 (675)
T ss_pred hHHHHHHHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC----------
Confidence 66666666777777 8899999999999999999999999999999999999987632100
Q ss_pred HHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChh
Q 001017 458 AMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537 (1189)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~ 537 (1189)
..++++...++|+.. +.||.
T Consensus 327 ----------------------------------------------~~~~ll~~aa~~~~~--------------s~hP~ 346 (675)
T TIGR01497 327 ----------------------------------------------DEKTLADAAQLASLA--------------DDTPE 346 (675)
T ss_pred ----------------------------------------------cHHHHHHHHHHhcCC--------------CCCcH
Confidence 012455666666532 36899
Q ss_pred HHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHH
Q 001017 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFER 617 (1189)
Q Consensus 538 e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~ 617 (1189)
+.|++++|++.|..... ..++.....||++.+++|++.+. +| ..++||+++.+++.
T Consensus 347 a~Aiv~~a~~~~~~~~~--------------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~ 402 (675)
T TIGR01497 347 GKSIVILAKQLGIREDD--------------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRH 402 (675)
T ss_pred HHHHHHHHHHcCCCccc--------------------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHH
Confidence 99999999987653211 12234567899999877776554 34 57899999999999
Q ss_pred hhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeee
Q 001017 618 LAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAV 697 (1189)
Q Consensus 618 ~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~i 697 (1189)
|...+...++++.+.+++++++|+|++++| .|.+++|++++
T Consensus 403 ~~~~g~~~~~~~~~~~~~~a~~G~r~l~va---------------------------------------~~~~~lG~i~l 443 (675)
T TIGR01497 403 VEANGGHIPTDLDQAVDQVARQGGTPLVVC---------------------------------------EDNRIYGVIYL 443 (675)
T ss_pred HHhcCCCCcHHHHHHHHHHHhCCCeEEEEE---------------------------------------ECCEEEEEEEe
Confidence 876555556678888899999999999999 34579999999
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHH
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1189)
+|++|+|++++|++|+++||+++|+|||+..||..+|+++|+.+
T Consensus 444 ~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~------------------------------------ 487 (675)
T TIGR01497 444 KDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD------------------------------------ 487 (675)
T ss_pred cccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE------------------------------------
Confidence 99999999999999999999999999999999999999999831
Q ss_pred HHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEc
Q 001017 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 857 (1189)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iG 857 (1189)
+++|++|++|..+|+.+|+ .|+.|+|+|
T Consensus 488 ---------------------------------------------------v~a~~~PedK~~~v~~lq~-~g~~VamvG 515 (675)
T TIGR01497 488 ---------------------------------------------------FIAEATPEDKIALIRQEQA-EGKLVAMTG 515 (675)
T ss_pred ---------------------------------------------------EEcCCCHHHHHHHHHHHHH-cCCeEEEEC
Confidence 8899999999999999998 789999999
Q ss_pred CCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHh
Q 001017 858 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEA 935 (1189)
Q Consensus 858 DG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~ 935 (1189)
||.||+|||++|||||+|+ +....|+++||+++++.++ +..+ +.+||..+.....+..|++..++.-.+..+-..|
T Consensus 516 DG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~ 593 (675)
T TIGR01497 516 DGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFSIANDVAKYFAIIPAIF 593 (675)
T ss_pred CCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheeeecccHHHHHHHHHHHH
Confidence 9999999999999999996 3344489999999998665 7777 8999999999999999999888776654444333
Q ss_pred hcccccccchh---------h-HHHHHHHHHHh--hHHHHhhhhcccCCChHHHhh-Cccchh
Q 001017 936 YASFSGQPVYN---------D-WFLSLYNVFFT--SLPVIALGVFDQDVSARFCLK-FPLLYQ 985 (1189)
Q Consensus 936 ~~~~sg~~~~~---------~-~~~l~~n~i~~--~lp~~~l~~~~~~~~~~~~~~-~P~ly~ 985 (1189)
...+.+...++ . ..-+.||.+.. .+|.-+-|+..++.+...+++ +--+|.
T Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (675)
T TIGR01497 594 AAAYPQLQALNIMCLHSPDSAILSALIFNALIIPALIPLALKGVSYRPLTASALLRRNLWIYG 656 (675)
T ss_pred HhhCcchhhhccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHhhceEEec
Confidence 33222211121 1 22345665442 244445566666666555443 334443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-71 Score=626.48 Aligned_cols=821 Identities=19% Similarity=0.232 Sum_probs=534.3
Q ss_pred ccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccchhhhhhHHHHHhhHHHHHHHHHhhh
Q 001017 52 VLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQ 131 (1189)
Q Consensus 52 ~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~s~i~~~~~d~~~~~~ 131 (1189)
.++||+|......+++- ..+.|.-.-|+..|+.++..||+.- ..||..++.|+.++.+ |.---++|.+.
T Consensus 173 ~~~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD---eyWYySlFtLfMli~f----E~tlV~Qrm~~ 241 (1160)
T KOG0209|consen 173 KHKYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLIAF----EATLVKQRMRT 241 (1160)
T ss_pred HHHhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH---HHHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 34599999999998765 6777888889999999999999972 2244445444444432 33334455555
Q ss_pred hHHH---h--cceEEEEecCCeEEEeecccCccccEEEecc---CCcCCccEEEeecccCCceEEEEecCCCCCCcceec
Q 001017 132 DIEV---N--NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEK---DEFFPADLILLSSSYEEAICYVETTNLDGETNLKLK 203 (1189)
Q Consensus 132 ~~~~---n--~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~---ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K 203 (1189)
..++ . +..+.|+ |+++|+.+...||.|||+|.|.. ...+|||++||.|+ |.|||++|||||.|..|
T Consensus 242 lse~R~Mg~kpy~I~v~-R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-----ciVnEaMLtGESvPl~K 315 (1160)
T KOG0209|consen 242 LSEFRTMGNKPYTINVY-RNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-----CIVNEAMLTGESVPLMK 315 (1160)
T ss_pred HHHHHhcCCCceEEEEE-ecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-----eeechhhhcCCCccccc
Confidence 4443 2 5678899 99999999999999999999988 67899999999999 99999999999999999
Q ss_pred ccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeec-CCeEEEEEEEeccccce-
Q 001017 204 QALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRN-TDCIYGAVIFTGRDTKV- 281 (1189)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n-t~~~~gvVv~tG~~Tk~- 281 (1189)
.+++.... + ..+..+..+++...|.||.+++-.. ..-++++. .+-+.|.|++||.+|.-
T Consensus 316 E~Ie~~~~----d------~~ld~~~d~k~hVlfGGTkivQht~---------p~~~slk~pDggc~a~VlrTGFeTSQG 376 (1160)
T KOG0209|consen 316 ESIELRDS----D------DILDIDRDDKLHVLFGGTKIVQHTP---------PKKASLKTPDGGCVAYVLRTGFETSQG 376 (1160)
T ss_pred cccccCCh----h------hhcccccccceEEEEcCceEEEecC---------CccccccCCCCCeEEEEEeccccccCC
Confidence 99875531 1 1122344445667888888875310 00111221 34489999999999943
Q ss_pred --eccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHH
Q 001017 282 --FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVL 359 (1189)
Q Consensus 282 --~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (1189)
++.......+-+. -|+-..++++++++++++++ +++|..... ++.. +-..
T Consensus 377 kLvRtilf~aervTa----Nn~Etf~FILFLlVFAiaAa--~Yvwv~Gsk-------------------d~~R---srYK 428 (1160)
T KOG0209|consen 377 KLVRTILFSAERVTA----NNRETFIFILFLLVFAIAAA--GYVWVEGSK-------------------DPTR---SRYK 428 (1160)
T ss_pred ceeeeEEecceeeee----ccHHHHHHHHHHHHHHHHhh--heEEEeccc-------------------Ccch---hhhh
Confidence 2221111111111 12223334444444444442 233332111 0100 1112
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEE
Q 001017 360 HFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFI 439 (1189)
Q Consensus 360 ~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (1189)
.|+-+..++...+|.-||+-++++.-....-+ ++.++.|..+-.+.-.|+||..|||||||||+..|.|.
T Consensus 429 L~LeC~LIlTSVvPpELPmELSmAVNsSL~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~ 498 (1160)
T KOG0209|consen 429 LFLECTLILTSVVPPELPMELSMAVNSSLIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVE 498 (1160)
T ss_pred eeeeeeEEEeccCCCCCchhhhHHHHHHHHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEE
Confidence 56677888999999999998877766555555 78999999999999999999999999999999999999
Q ss_pred EEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhccee
Q 001017 440 KCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTAL 519 (1189)
Q Consensus 440 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~ 519 (1189)
++- |..-..+.. .+-.+...+-...+|.||+..
T Consensus 499 Gva--g~~~~~~~~---------------------------------------------~~~s~~p~~t~~vlAscHsLv 531 (1160)
T KOG0209|consen 499 GVA--GLSADEGAL---------------------------------------------TPASKAPNETVLVLASCHSLV 531 (1160)
T ss_pred ecc--cccCCcccc---------------------------------------------cchhhCCchHHHHHHHHHHHH
Confidence 863 211100000 000011124577999999987
Q ss_pred ccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeC
Q 001017 520 PEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE 599 (1189)
Q Consensus 520 ~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~ 599 (1189)
.-.++ -.++|.|+|.+++ .|+.+...+. +.. . ++.....+|.+.+.|+|.-||||||+...
T Consensus 532 ~le~~-------lVGDPlEKA~l~~---v~W~~~k~~~--v~p-----~--~~~~~~lkI~~ryhFsSaLKRmsvva~~~ 592 (1160)
T KOG0209|consen 532 LLEDK-------LVGDPLEKATLEA---VGWNLEKKNS--VCP-----R--EGNGKKLKIIQRYHFSSALKRMSVVASHQ 592 (1160)
T ss_pred HhcCc-------ccCChHHHHHHHh---cCcccccCcc--cCC-----C--cCCCcccchhhhhhHHHHHHHHHhhhhcc
Confidence 64432 3689999999874 6676654221 100 0 11124678899999999999999999875
Q ss_pred C----CeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHH
Q 001017 600 E----GTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRE 675 (1189)
Q Consensus 600 ~----~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~ 675 (1189)
+ -+++..+|||||+|.+++.+ .+.++.+...+|+++|.|||++|||.+.+-- ..
T Consensus 593 ~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~------------------~~ 650 (1160)
T KOG0209|consen 593 GPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEIYKRYTRQGSRVLALGYKPLGDMM------------------VS 650 (1160)
T ss_pred cCCCceEEEEEecCCHHHHHHHHHh----CchhHHHHHHHHhhccceEEEEecccccccc------------------hh
Confidence 3 37899999999999999864 5778888899999999999999999997321 11
Q ss_pred HHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCC-
Q 001017 676 ELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETP- 754 (1189)
Q Consensus 676 ~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~- 754 (1189)
+.-+..++.+|+||+|.|.+.|.-|+|++++++|+.|++++++++|+|||++.||.++|+++|++.....++.+..+..
T Consensus 651 q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~ 730 (1160)
T KOG0209|consen 651 QVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDG 730 (1160)
T ss_pred hhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCC
Confidence 1122345789999999999999999999999999999999999999999999999999999999876555544444321
Q ss_pred cccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCC---CCCCeEEEEcCchhhhhhhHH-HHHHHHHHHhccceeEE
Q 001017 755 ESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNE---SLGPLALIIDGKSLTYALEDD-VKDLFLELAIGCASVIC 830 (1189)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvi~G~~l~~~~~~~-~~~~~~~~~~~~~~vv~ 830 (1189)
.+.++..-+ +.+. -.+..... ....+.++++|..++.+...+ ++..+. ++-||
T Consensus 731 ~~~~w~s~d----------~t~~-------lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~------hv~Vf 787 (1160)
T KOG0209|consen 731 NQLEWVSVD----------GTIV-------LPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIP------HVWVF 787 (1160)
T ss_pred ceeeEecCC----------Ccee-------ecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhh------heeEE
Confidence 111111000 0000 00000000 123457899999999888765 333333 34499
Q ss_pred EeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcc------hh----------------------
Q 001017 831 CRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG------MQ---------------------- 882 (1189)
Q Consensus 831 ~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~------~~---------------------- 882 (1189)
+|+.|.||..++..+|+ .|..|+|||||.||++||++||||||+-++.. .+
T Consensus 788 ARvaP~QKE~ii~tlK~-~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 866 (1160)
T KOG0209|consen 788 ARVAPKQKEFIITTLKK-LGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNS 866 (1160)
T ss_pred EeeChhhHHHHHHHHHh-cCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccC
Confidence 99999999999999999 89999999999999999999999998843111 00
Q ss_pred ------------------------------------------hhhcccccccc--chhhHHHHHHhhhhhhhhhhHhHHH
Q 001017 883 ------------------------------------------AVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICY 918 (1189)
Q Consensus 883 ------------------------------------------a~~~sD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~ 918 (1189)
|..||.|.-.- -..+... +..||+..-..-++
T Consensus 867 ~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~I-IrQGRctLVtTlQM--- 942 (1160)
T KOG0209|consen 867 PRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHI-IRQGRCTLVTTLQM--- 942 (1160)
T ss_pred CCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHH-HHhcchhHHHHHHH---
Confidence 11222222111 2223333 88999987665444
Q ss_pred HHHHHHHHHHHHHHHHhhcc-cccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhccccccccchhh
Q 001017 919 FFYKNIAFGFTLFFFEAYAS-FSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTR 997 (1189)
Q Consensus 919 ~~~kni~~~~~~~~~~~~~~-~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~ 997 (1189)
+|-+++..+...|+.-.. .-| -=|.+.|.+.--+++ .+.++.+....|-+. |-+.++...+||...
T Consensus 943 --fKILALN~LisAYslSvlyldG-VKfgD~QaTisGlLl---a~cFlfISrskPLet-------LSkeRP~~nIFN~Y~ 1009 (1160)
T KOG0209|consen 943 --FKILALNCLISAYSLSVLYLDG-VKFGDTQATISGLLL---AACFLFISRSKPLET-------LSKERPLPNIFNVYI 1009 (1160)
T ss_pred --HHHHHHHHHHHHHHHHHhhhcC-ceecchhHhHHHHHH---HHHHhheecCCchhh-------HhhcCCCCCcchHHH
Confidence 444444444433332211 112 126667766655543 223333433222222 233344567899999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHhhccccccC---CCceeehhhhhhHHHHHHHHHHHHHHHHhcccc----hhhHHHHHHH
Q 001017 998 ILGWALNGVANAAIIFFFCIHAMKQQAFRK---GGEVIGLEILGTTMYTCVVWVVNCQMALSVTYF----TYIQHLFIWG 1070 (1189)
Q Consensus 998 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~f~~~v~~~n~~~~l~~~~~----t~~~~~~i~~ 1070 (1189)
+.+.+.+-..|-..++++.-.++....-.. --..++.....+.+|......+-...+...... +...+..+..
T Consensus 1010 i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAVNY~G~PF~Esl~eNK~l~y 1089 (1160)
T KOG0209|consen 1010 ILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAVNYQGRPFRESLRENKGLLY 1089 (1160)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhhhhccCcchhhhhhhccchHH
Confidence 988888888887777776665544321111 112233445556666554443333333322222 2345555555
Q ss_pred HHHHH
Q 001017 1071 GITFW 1075 (1189)
Q Consensus 1071 si~~~ 1075 (1189)
+++..
T Consensus 1090 ~ll~~ 1094 (1160)
T KOG0209|consen 1090 GLLGS 1094 (1160)
T ss_pred HHHHH
Confidence 44443
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-71 Score=616.51 Aligned_cols=731 Identities=17% Similarity=0.193 Sum_probs=525.4
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcccc-C--CCCCCccchhhhhhHHHHHhhHHHHH
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-L--SPYSAVSNVLPLVVVIGATMGKEVLE 124 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~-~--~~~~~~~~~~~l~~vl~~s~i~~~~~ 124 (1189)
.++|++.||.|+....|.+.+ +.|+.-|..|..|..-.++++.... - .....|....-++..+++++...++|
T Consensus 42 ~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~Fve 117 (942)
T KOG0205|consen 42 VEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIE 117 (942)
T ss_pred HHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeee
Confidence 377899999999999998766 5566778889889999999988763 1 11124566677777888888889999
Q ss_pred HHHHhhhhHHHh---cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcce
Q 001017 125 DWRRKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLK 201 (1189)
Q Consensus 125 d~~~~~~~~~~n---~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~ 201 (1189)
+++.-.....+. ..++.|+ |||+|.+...+.|+|||||.++.|+.+|||++||++.. +.||+|.|||||.|+
T Consensus 118 E~nAGn~aa~L~a~LA~KakVl-RDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD~----LkiDQSAlTGESLpv 192 (942)
T KOG0205|consen 118 ENNAGNAAAALMAGLAPKAKVL-RDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGDP----LKIDQSALTGESLPV 192 (942)
T ss_pred ccccchHHHHHHhccCcccEEe-ecCeeeeeeccccccCceeeeccCCEecCccceecCCc----cccchhhhcCCcccc
Confidence 988877755554 5789999 99999999999999999999999999999999999985 899999999999999
Q ss_pred ecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccce
Q 001017 202 LKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV 281 (1189)
Q Consensus 202 ~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~ 281 (1189)
.|.+++++ |+|+.+.+|+ +.+||++||..|-.
T Consensus 193 tKh~gd~v---------------------------fSgSTcKqGE---------------------~eaVViATg~~TF~ 224 (942)
T KOG0205|consen 193 TKHPGDEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTFF 224 (942)
T ss_pred ccCCCCce---------------------------ecccccccce---------------------EEEEEEEeccceee
Confidence 99999987 9999999999 99999999999966
Q ss_pred eccCC--CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHH
Q 001017 282 FQNST--GPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVL 359 (1189)
Q Consensus 282 ~~~~~--~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (1189)
++.+. .+..+..++++-++.+..++++.+.+-.++..++.+..+..... .
T Consensus 225 GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r----------------------------~ 276 (942)
T KOG0205|consen 225 GKAAHLVDSTNQVGHFQKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYR----------------------------D 276 (942)
T ss_pred hhhHHhhcCCCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhh----------------------------h
Confidence 54332 23566789999999988877654443333332222222211100 0
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEE
Q 001017 360 HFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFI 439 (1189)
Q Consensus 360 ~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~ 439 (1189)
.+-+-+++++.-||++||..+++..++++.++ ++++++++..+++|+|+.+|++|+|||||||.|++.+.
T Consensus 277 ~i~nLlvllIGgiPiamPtVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvd 346 (942)
T KOG0205|consen 277 GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD 346 (942)
T ss_pred hhhheheeeecccccccceeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecC
Confidence 22233445556699999999999999999999 89999999999999999999999999999999999987
Q ss_pred E----EEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhh
Q 001017 440 K----CSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAIC 515 (1189)
Q Consensus 440 ~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC 515 (1189)
+ +++.|.. .+ ...++.|+|.
T Consensus 347 knl~ev~v~gv~------------------------------------------------------~D-~~~L~A~rAs- 370 (942)
T KOG0205|consen 347 KNLIEVFVKGVD------------------------------------------------------KD-DVLLTAARAS- 370 (942)
T ss_pred cCcceeeecCCC------------------------------------------------------hH-HHHHHHHHHh-
Confidence 6 2222211 00 0112222221
Q ss_pred cceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEE
Q 001017 516 HTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVI 595 (1189)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 595 (1189)
.. ...+..|.|+|...++- +.....|+.++.+|||+..||....
T Consensus 371 ---r~-----------en~DAID~A~v~~L~dP----------------------Keara~ikevhF~PFnPV~Krta~t 414 (942)
T KOG0205|consen 371 ---RK-----------ENQDAIDAAIVGMLADP----------------------KEARAGIKEVHFLPFNPVDKRTALT 414 (942)
T ss_pred ---hh-----------cChhhHHHHHHHhhcCH----------------------HHHhhCceEEeeccCCccccceEEE
Confidence 11 13588999999876531 1123678999999999999999999
Q ss_pred EEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHH
Q 001017 596 VRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRE 675 (1189)
Q Consensus 596 v~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~ 675 (1189)
+.+++|+.+..+||||+-|++.|+.. .+.++...+.+++||++|+|.|++|++..++..-
T Consensus 415 y~d~dG~~~r~sKGAPeqil~l~~~~-~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~------------------- 474 (942)
T KOG0205|consen 415 YIDPDGNWHRVSKGAPEQILKLCNED-HDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK------------------- 474 (942)
T ss_pred EECCCCCEEEecCCChHHHHHHhhcc-CcchHHHHHHHHHHHHhcchhhhhhhhccccccc-------------------
Confidence 99999999999999999999999875 3788899999999999999999999998876420
Q ss_pred HHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCc
Q 001017 676 ELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE 755 (1189)
Q Consensus 676 ~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~ 755 (1189)
+.-....+++|+.-+-||+|.+..++|.....-|..|.|+|||....++..++.+|+-++-.+--.+-+...+
T Consensus 475 -------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~ 547 (942)
T KOG0205|consen 475 -------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKD 547 (942)
T ss_pred -------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCC
Confidence 1122568899999999999999999999999999999999999999999999999985432110000000000
Q ss_pred ccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCc
Q 001017 756 SKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 835 (1189)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP 835 (1189)
--+.|...+...+ ++--|+.+.|
T Consensus 548 -------------------------------------------~~~~~~~v~elie--------------~adgfAgVfp 570 (942)
T KOG0205|consen 548 -------------------------------------------GSMPGSPVDELIE--------------KADGFAGVFP 570 (942)
T ss_pred -------------------------------------------CCCCCCcHHHHhh--------------hccCccccCH
Confidence 0111111211111 2237899999
Q ss_pred ccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccch--hhHHHHHHhhhhhhhhhh
Q 001017 836 KQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR--FLERLLLVHGHWCYRRIS 913 (1189)
Q Consensus 836 ~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~--~l~~lll~~GR~~~~~i~ 913 (1189)
++|.++|+.+|+ .++.++|.|||+||+|+|+.||+||++.+.... |..+||+++..-. -+... +..+|.+|+|++
T Consensus 571 ehKy~iV~~Lq~-r~hi~gmtgdgvndapaLKkAdigiava~atda-ar~asdiVltepglSviI~a-vltSraIfqrmk 647 (942)
T KOG0205|consen 571 EHKYEIVKILQE-RKHIVGMTGDGVNDAPALKKADIGIAVADATDA-ARSASDIVLTEPGLSVIISA-VLTSRAIFQRMK 647 (942)
T ss_pred HHHHHHHHHHhh-cCceecccCCCcccchhhcccccceeeccchhh-hcccccEEEcCCCchhhHHH-HHHHHHHHHHHh
Confidence 999999999999 899999999999999999999999999776654 8899999999844 35555 788999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhcccccccc
Q 001017 914 SMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILF 993 (1189)
Q Consensus 914 ~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~ 993 (1189)
.+..|.+.-.+-+++..++..+...|. |+++..+++.++ +--+.+.++.. +.|+ .+...-+
T Consensus 648 nytiyavsitiriv~gfml~alIw~~d----f~pfmvliiail-nd~t~mtis~d----------~v~p----sp~pdsw 708 (942)
T KOG0205|consen 648 NYTIYAVSITIRIVFGFMLIALIWEFD----FSPFMVLIIAIL-NDGTIMTISKD----------RVKP----SPTPDSW 708 (942)
T ss_pred hheeeeehhHHHHHHHHHHHHHHHHhc----CCHHHHHHHHHh-cCCceEEEEcc----------cCCC----CCCCccc
Confidence 999998877666553333333322221 222322222222 11222222211 1111 1222222
Q ss_pred ch-hhhhhhhhhhHHHHHHHHHHHHHhhccccccCCCceee----hhhhhhHHHHHHHHHHHHHH-HHhcccchhhHHHH
Q 001017 994 SW-TRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIG----LEILGTTMYTCVVWVVNCQM-ALSVTYFTYIQHLF 1067 (1189)
Q Consensus 994 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~f~~~v~~~n~~~-~l~~~~~t~~~~~~ 1067 (1189)
+. ..|..-+..|.|++++...+++..+....+.....+.. .......+|..+.++.+..+ ..++++|.|.....
T Consensus 709 kl~~ifatgvVlgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg 788 (942)
T KOG0205|consen 709 KLKEIFATGVVLGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPG 788 (942)
T ss_pred chhhhheeeeEehhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcH
Confidence 22 23445566788888887777666555444432222211 11233444555555555444 35677787766655
Q ss_pred HHHH
Q 001017 1068 IWGG 1071 (1189)
Q Consensus 1068 i~~s 1071 (1189)
++..
T Consensus 789 ~~L~ 792 (942)
T KOG0205|consen 789 WLLL 792 (942)
T ss_pred HHHH
Confidence 5443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-66 Score=626.61 Aligned_cols=475 Identities=33% Similarity=0.460 Sum_probs=396.5
Q ss_pred hhhhhhHHHHHhhHHHHHHHHHhhhhHHHhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCce
Q 001017 107 VLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAI 186 (1189)
Q Consensus 107 ~~~l~~vl~~s~i~~~~~d~~~~~~~~~~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~ 186 (1189)
+++++..++....+...++..+...+...++++++|+ |+| ++.|++++|+|||+|.+++||.+||||++++|+
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~-r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~----- 76 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVL-RNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS----- 76 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEE-ECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-----
Confidence 4455555555555555555555555555788999999 899 999999999999999999999999999999997
Q ss_pred EEEEecCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCC
Q 001017 187 CYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTD 266 (1189)
Q Consensus 187 ~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~ 266 (1189)
|.||||+||||+.|+.|++++.. |+|+.+.+|.
T Consensus 77 ~~vdes~LTGEs~pv~k~~g~~v---------------------------~~gs~~~~G~-------------------- 109 (499)
T TIGR01494 77 CFVDESNLTGESVPVLKTAGDAV---------------------------FAGTYVFNGT-------------------- 109 (499)
T ss_pred EEEEcccccCCCCCeeeccCCcc---------------------------ccCcEEeccE--------------------
Confidence 99999999999999999987654 8999999998
Q ss_pred eEEEEEEEeccccce---eccCCCCCCCCcHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCC
Q 001017 267 CIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKII-YFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPD 342 (1189)
Q Consensus 267 ~~~gvVv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1189)
+.+.|+.+|.+|.. ..........++++++..+++. .+++++.++++++.++++..+.... .
T Consensus 110 -~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~------~------- 175 (499)
T TIGR01494 110 -LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP------N------- 175 (499)
T ss_pred -EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc------c-------
Confidence 88899999999843 3333344455788999999998 6777777777776666554321100 0
Q ss_pred CCCCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeE
Q 001017 343 DTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDT 422 (1189)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~ 422 (1189)
.+...+.+++++++.+|||+|+++++++...+..++ .++++++|+++.+|+||++++
T Consensus 176 -------------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v~~ 232 (499)
T TIGR01494 176 -------------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKVDY 232 (499)
T ss_pred -------------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCCcE
Confidence 113478899999999999999999999999998888 788999999999999999999
Q ss_pred EEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCch
Q 001017 423 ILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHA 502 (1189)
Q Consensus 423 i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 502 (1189)
+|||||||||+|+|+|.++++.+.
T Consensus 233 i~fDKTGTLT~~~~~v~~~~~~~~-------------------------------------------------------- 256 (499)
T TIGR01494 233 ICSDKTGTLTKNEMSFKKVSVLGG-------------------------------------------------------- 256 (499)
T ss_pred EEeeCCCccccCceEEEEEEecCC--------------------------------------------------------
Confidence 999999999999999999864321
Q ss_pred HHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeee
Q 001017 503 DVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNV 582 (1189)
Q Consensus 503 ~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~ 582 (1189)
++.++||+|.|++++++..+ +..
T Consensus 257 ---------------------------~~~s~hp~~~ai~~~~~~~~------------------------------~~~ 279 (499)
T TIGR01494 257 ---------------------------EYLSGHPDERALVKSAKWKI------------------------------LNV 279 (499)
T ss_pred ---------------------------CcCCCChHHHHHHHHhhhcC------------------------------cce
Confidence 01257999999999886411 135
Q ss_pred ecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHH
Q 001017 583 LEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEE 662 (1189)
Q Consensus 583 ~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~ 662 (1189)
.||++.+++|+++++.+++ .|+||+++.+.+.|.. +.+.+++++.+|+|++++|++
T Consensus 280 ~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g~~~~~~a~~------------- 335 (499)
T TIGR01494 280 FEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSGLRVLAVASK------------- 335 (499)
T ss_pred eccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCCCEEEEEEEC-------------
Confidence 6999999999999987444 4789999999988742 234455678899999999953
Q ss_pred HHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccC
Q 001017 663 FTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 742 (1189)
Q Consensus 663 ~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~ 742 (1189)
-+++|+++++|++|++++++|+.|+++|+++||+|||+.++|..+|+++|+
T Consensus 336 --------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--- 386 (499)
T TIGR01494 336 --------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI--- 386 (499)
T ss_pred --------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---
Confidence 259999999999999999999999999999999999999999999999873
Q ss_pred CceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHH
Q 001017 743 GMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA 822 (1189)
Q Consensus 743 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~ 822 (1189)
T Consensus 387 -------------------------------------------------------------------------------- 386 (499)
T TIGR01494 387 -------------------------------------------------------------------------------- 386 (499)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHH
Q 001017 823 IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERL 900 (1189)
Q Consensus 823 ~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~l 900 (1189)
++|++|+||.++|+.+|+ .|+.|+|+|||.||++||++|||||+|. |+++||+++.+++. +..+
T Consensus 387 -------~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~ 452 (499)
T TIGR01494 387 -------FARVTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDA 452 (499)
T ss_pred -------eeccCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHH
Confidence 477899999999999998 7899999999999999999999999994 68899999998655 4444
Q ss_pred HHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHH
Q 001017 901 LLVHGHWCYRRISSMICYFFYKNIAFGFTLFFF 933 (1189)
Q Consensus 901 ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~ 933 (1189)
+.+||..++++++++.|.+++|++.....+++
T Consensus 453 -~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 453 -LKEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999977766653
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-65 Score=615.82 Aligned_cols=491 Identities=22% Similarity=0.278 Sum_probs=402.0
Q ss_pred HHHHhhHHHHHHHHHhhhhHHH------hcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceE
Q 001017 114 IGATMGKEVLEDWRRKKQDIEV------NNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAIC 187 (1189)
Q Consensus 114 l~~s~i~~~~~d~~~~~~~~~~------n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~ 187 (1189)
+++-.+-+++|++-+.|+.+.+ .+++++++++||+.++|+.++|++||+|.|++||+||+||++++|+ .
T Consensus 181 i~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~-----s 255 (713)
T COG2217 181 IFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGS-----S 255 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCc-----E
Confidence 3333455666666666654433 3788988845666999999999999999999999999999999999 7
Q ss_pred EEEecCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCe
Q 001017 188 YVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDC 267 (1189)
Q Consensus 188 ~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~ 267 (1189)
.||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 256 ~vDeS~iTGEs~PV~k~~Gd~V---------------------------~aGtiN~~G~--------------------- 287 (713)
T COG2217 256 SVDESMLTGESLPVEKKPGDEV---------------------------FAGTVNLDGS--------------------- 287 (713)
T ss_pred EeecchhhCCCCCEecCCCCEE---------------------------eeeEEECCcc---------------------
Confidence 9999999999999999999877 9999999998
Q ss_pred EEEEEEEeccccce---eccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCC
Q 001017 268 IYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDT 344 (1189)
Q Consensus 268 ~~gvVv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1189)
+...|+.+|.||.+ .+..++++.++++.|+..|++..++++..++++++++++|.++... .|
T Consensus 288 l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~--------~~------- 352 (713)
T COG2217 288 LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--------DW------- 352 (713)
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC--------cH-------
Confidence 99999999999954 5566788899999999999999999999999999888866554321 12
Q ss_pred CCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEE
Q 001017 345 TAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTIL 424 (1189)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~ 424 (1189)
-..+.+++.+++..|||+|.++.+++...+..+. .++|+++|+.+.+|.|+++|+|+
T Consensus 353 -------------~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l~~v~tvv 409 (713)
T COG2217 353 -------------ETALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERLAKVDTVV 409 (713)
T ss_pred -------------HHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhhccCCEEE
Confidence 1268899999999999999999999999999888 89999999999999999999999
Q ss_pred eCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHH
Q 001017 425 SDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADV 504 (1189)
Q Consensus 425 ~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 504 (1189)
||||||||+|+|++..+...+. ++
T Consensus 410 FDKTGTLT~G~p~v~~v~~~~~------~e-------------------------------------------------- 433 (713)
T COG2217 410 FDKTGTLTEGKPEVTDVVALDG------DE-------------------------------------------------- 433 (713)
T ss_pred EeCCCCCcCCceEEEEEecCCC------CH--------------------------------------------------
Confidence 9999999999999998874332 00
Q ss_pred HHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeec
Q 001017 505 IQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLE 584 (1189)
Q Consensus 505 ~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~ 584 (1189)
.+++...+ ..|..++||..+|++++|+..|.... ......+|+|++..+
T Consensus 434 -~~~L~laA--------------alE~~S~HPiA~AIv~~a~~~~~~~~---------~~~~~i~G~Gv~~~v------- 482 (713)
T COG2217 434 -DELLALAA--------------ALEQHSEHPLAKAIVKAAAERGLPDV---------EDFEEIPGRGVEAEV------- 482 (713)
T ss_pred -HHHHHHHH--------------HHHhcCCChHHHHHHHHHHhcCCCCc---------cceeeeccCcEEEEE-------
Confidence 12222222 12344789999999999998762111 112233455555544
Q ss_pred CCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHH
Q 001017 585 FSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFT 664 (1189)
Q Consensus 585 F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~ 664 (1189)
+|+.+ .-|.+..+.+.-. +... ..+..+.+..+|..++.++
T Consensus 483 ---------------~g~~v--~vG~~~~~~~~~~----~~~~-~~~~~~~~~~~G~t~v~va----------------- 523 (713)
T COG2217 483 ---------------DGERV--LVGNARLLGEEGI----DLPL-LSERIEALESEGKTVVFVA----------------- 523 (713)
T ss_pred ---------------CCEEE--EEcCHHHHhhcCC----Cccc-hhhhHHHHHhcCCeEEEEE-----------------
Confidence 55333 3377766643211 1111 4566778888999988888
Q ss_pred HHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCc
Q 001017 665 EAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM 744 (1189)
Q Consensus 665 ~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~ 744 (1189)
.|.+++|+++++|++|++++++|+.|++.||++.|||||+..+|..||+++||..
T Consensus 524 ----------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~--- 578 (713)
T COG2217 524 ----------------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE--- 578 (713)
T ss_pred ----------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh---
Confidence 5668999999999999999999999999999999999999999999999999832
Q ss_pred eEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhc
Q 001017 745 RQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG 824 (1189)
Q Consensus 745 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~ 824 (1189)
T Consensus 579 -------------------------------------------------------------------------------- 578 (713)
T COG2217 579 -------------------------------------------------------------------------------- 578 (713)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHHHH
Q 001017 825 CASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLL 902 (1189)
Q Consensus 825 ~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~lll 902 (1189)
+.+.+.|++|.++|+.+|+ .|++|+|||||.||+|+|.+|||||+|+. ..+.|.++||+++++.+. +..+ +
T Consensus 579 ----v~AellPedK~~~V~~l~~-~g~~VamVGDGINDAPALA~AdVGiAmG~-GtDvA~eaADvvL~~~dL~~v~~a-i 651 (713)
T COG2217 579 ----VRAELLPEDKAEIVRELQA-EGRKVAMVGDGINDAPALAAADVGIAMGS-GTDVAIEAADVVLMRDDLSAVPEA-I 651 (713)
T ss_pred ----heccCCcHHHHHHHHHHHh-cCCEEEEEeCCchhHHHHhhcCeeEeecC-CcHHHHHhCCEEEecCCHHHHHHH-H
Confidence 8999999999999999998 78999999999999999999999999964 334499999999998655 6666 8
Q ss_pred HhhhhhhhhhhHhHHHHHHHHHHHHHHHHHH
Q 001017 903 VHGHWCYRRISSMICYFFYKNIAFGFTLFFF 933 (1189)
Q Consensus 903 ~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~ 933 (1189)
..+|..++++++++.|.|.+|.+++.+..+.
T Consensus 652 ~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 652 DLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999887666554
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-61 Score=600.17 Aligned_cols=482 Identities=21% Similarity=0.229 Sum_probs=386.3
Q ss_pred HHhhHHHHHHHHHhhhhHHH------hcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEE
Q 001017 116 ATMGKEVLEDWRRKKQDIEV------NNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYV 189 (1189)
Q Consensus 116 ~s~i~~~~~d~~~~~~~~~~------n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~V 189 (1189)
+..+.+++|.+.++|+.+.+ .+.+++|+ |||++++|+.++|+|||+|.|++||.|||||++++|+ +.|
T Consensus 215 l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vi-r~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~-----~~v 288 (741)
T PRK11033 215 LFLIGERLEGYAASRARRGVSALMALVPETATRL-RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPF-----ASF 288 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECc-----EEe
Confidence 33445556665555554333 36789999 9999999999999999999999999999999999998 899
Q ss_pred EecCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEE
Q 001017 190 ETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIY 269 (1189)
Q Consensus 190 d~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~ 269 (1189)
|||.||||+.|+.|.+++.. |+||++.+|. +.
T Consensus 289 des~lTGEs~Pv~k~~Gd~V---------------------------~aGt~~~~G~---------------------~~ 320 (741)
T PRK11033 289 DESALTGESIPVERATGEKV---------------------------PAGATSVDRL---------------------VT 320 (741)
T ss_pred ecccccCCCCCEecCCCCee---------------------------ccCCEEcCce---------------------EE
Confidence 99999999999999998755 9999999998 99
Q ss_pred EEEEEeccccce---eccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCC
Q 001017 270 GAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTA 346 (1189)
Q Consensus 270 gvVv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (1189)
+.|+.+|.+|.+ .....+++.+++++|+.++++..++.+++++++++.+++|.++... +|
T Consensus 321 i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~--------~~--------- 383 (741)
T PRK11033 321 LEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA--------PW--------- 383 (741)
T ss_pred EEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--------CH---------
Confidence 999999999954 4455677778999999999999999999999999988876433210 12
Q ss_pred ccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeC
Q 001017 347 YYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSD 426 (1189)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~D 426 (1189)
-..+.+++.+++..|||+|.++.+++...+.... .++|+++|+.+.+|.|+++|+||||
T Consensus 384 -----------~~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v~~v~fD 442 (741)
T PRK11033 384 -----------QEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRVTTVAFD 442 (741)
T ss_pred -----------HHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCCCEEEEe
Confidence 1146678899999999999888888888777776 7899999999999999999999999
Q ss_pred CCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHH
Q 001017 427 KTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQ 506 (1189)
Q Consensus 427 KTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 506 (1189)
||||||+|+|++.++...+.. + .+
T Consensus 443 KTGTLT~g~~~v~~~~~~~~~-----~---------------------------------------------------~~ 466 (741)
T PRK11033 443 KTGTLTEGKPQVTDIHPATGI-----S---------------------------------------------------ES 466 (741)
T ss_pred CCCCCcCCceEEEEEEecCCC-----C---------------------------------------------------HH
Confidence 999999999999987632210 0 01
Q ss_pred HHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCC
Q 001017 507 KFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFS 586 (1189)
Q Consensus 507 ~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~ 586 (1189)
+++...+.. +..+.||.+.|+++++++.|.. +||.
T Consensus 467 ~~l~~aa~~--------------e~~s~hPia~Ai~~~a~~~~~~-------------------------------~~~~ 501 (741)
T PRK11033 467 ELLALAAAV--------------EQGSTHPLAQAIVREAQVRGLA-------------------------------IPEA 501 (741)
T ss_pred HHHHHHHHH--------------hcCCCCHHHHHHHHHHHhcCCC-------------------------------CCCC
Confidence 222222211 1225799999999999876532 3444
Q ss_pred CCCceEEE-EEE-eCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHH
Q 001017 587 SSRKRMSV-IVR-SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFT 664 (1189)
Q Consensus 587 s~rkrmsv-iv~-~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~ 664 (1189)
++++.+.- -++ .-+|+.+. -|+++.+.+ ..+...+.++++..+|.|++++|
T Consensus 502 ~~~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~--------~~~~~~~~~~~~~~~g~~~v~va----------------- 554 (741)
T PRK11033 502 ESQRALAGSGIEGQVNGERVL--ICAPGKLPP--------LADAFAGQINELESAGKTVVLVL----------------- 554 (741)
T ss_pred cceEEEeeEEEEEEECCEEEE--Eecchhhhh--------ccHHHHHHHHHHHhCCCEEEEEE-----------------
Confidence 45554421 111 11444333 378877654 11234455678899999999999
Q ss_pred HHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCc
Q 001017 665 EAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM 744 (1189)
Q Consensus 665 ~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~ 744 (1189)
.|.+++|+++++|++|+|++++|++|++.|++++|+|||+..+|..+|+++||.
T Consensus 555 ----------------------~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---- 608 (741)
T PRK11033 555 ----------------------RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---- 608 (741)
T ss_pred ----------------------ECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----
Confidence 466899999999999999999999999999999999999999999999999982
Q ss_pred eEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhc
Q 001017 745 RQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG 824 (1189)
Q Consensus 745 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~ 824 (1189)
T Consensus 609 -------------------------------------------------------------------------------- 608 (741)
T PRK11033 609 -------------------------------------------------------------------------------- 608 (741)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHHHH
Q 001017 825 CASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLL 902 (1189)
Q Consensus 825 ~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~lll 902 (1189)
..++..|++|..+|+.+++ ++.|+|+|||.||++||++|||||+|++ ..+.++++||+++.+.++ |..+ +
T Consensus 609 ----~~~~~~p~~K~~~v~~l~~--~~~v~mvGDgiNDapAl~~A~vgia~g~-~~~~a~~~adivl~~~~l~~l~~~-i 680 (741)
T PRK11033 609 ----FRAGLLPEDKVKAVTELNQ--HAPLAMVGDGINDAPAMKAASIGIAMGS-GTDVALETADAALTHNRLRGLAQM-I 680 (741)
T ss_pred ----eecCCCHHHHHHHHHHHhc--CCCEEEEECCHHhHHHHHhCCeeEEecC-CCHHHHHhCCEEEecCCHHHHHHH-H
Confidence 4456789999999999986 3589999999999999999999999963 344588999999987554 6655 8
Q ss_pred HhhhhhhhhhhHhHHHHHHHHHHHHHHHH
Q 001017 903 VHGHWCYRRISSMICYFFYKNIAFGFTLF 931 (1189)
Q Consensus 903 ~~GR~~~~~i~~~i~~~~~kni~~~~~~~ 931 (1189)
..||..++++++++.|.+.+|+++..+.+
T Consensus 681 ~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 681 ELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987665554
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-61 Score=566.11 Aligned_cols=503 Identities=20% Similarity=0.227 Sum_probs=400.8
Q ss_pred hHHHHHHHHHhhhhHHH------hcceEEEEecCCe-EEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEe
Q 001017 119 GKEVLEDWRRKKQDIEV------NNRKVKVHCGEGA-FDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVET 191 (1189)
Q Consensus 119 i~~~~~d~~~~~~~~~~------n~~~~~v~~r~g~-~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~ 191 (1189)
+.++.|...++|+-..+ .+.++.++ .+|+ .++|+.+.|++||+|+|.+|+.||+||++++|+ ++|||
T Consensus 353 lgr~LE~~Ak~kts~alskLmsl~p~~a~ii-~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gs-----s~VDE 426 (951)
T KOG0207|consen 353 LGRWLESLAKGKTSEALSKLMSLAPSKATII-EDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGS-----SEVDE 426 (951)
T ss_pred HHHHHHHHhhccchHHHHHHhhcCcccceEe-ecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCc-----eeech
Confidence 45566666666664433 37889999 7886 899999999999999999999999999999999 99999
Q ss_pred cCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEE
Q 001017 192 TNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 271 (1189)
Q Consensus 192 s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gv 271 (1189)
|.+|||+.|+.|++++.+ .+|+++.+|. ++.-
T Consensus 427 s~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~---------------------l~Vk 458 (951)
T KOG0207|consen 427 SLITGESMPVPKKKGSTV---------------------------IAGSINLNGT---------------------LLVK 458 (951)
T ss_pred hhccCCceecccCCCCee---------------------------eeeeecCCce---------------------EEEE
Confidence 999999999999999876 8999999998 9999
Q ss_pred EEEeccccc---eeccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCcc
Q 001017 272 VIFTGRDTK---VFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYY 348 (1189)
Q Consensus 272 Vv~tG~~Tk---~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (1189)
++.+|.||. +.+..++++..+.|+|+.+|++..++.++++++++.++++|.+..... .||-
T Consensus 459 aT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~-------~~~~--------- 522 (951)
T KOG0207|consen 459 ATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIV-------FKYP--------- 522 (951)
T ss_pred EEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccc-------ccCc---------
Confidence 999999995 456667888999999999999999999999999999999998776533 1221
Q ss_pred CchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCC
Q 001017 349 DPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKT 428 (1189)
Q Consensus 349 ~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKT 428 (1189)
..........|..++++++.+|||+|.++.+.+.+.+...- +.+|+++|..+.+|.+.+|++|.||||
T Consensus 523 --~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGge~LE~~hkv~tVvFDKT 590 (951)
T KOG0207|consen 523 --RSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGGEALEKAHKVKTVVFDKT 590 (951)
T ss_pred --chhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCcHHHHHHhcCCEEEEcCC
Confidence 11112344578889999999999999999888777666554 789999999999999999999999999
Q ss_pred ccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHH
Q 001017 429 GTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKF 508 (1189)
Q Consensus 429 GTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 508 (1189)
||||+|++.+.++.+.+.... .+++
T Consensus 591 GTLT~G~~~V~~~~~~~~~~~-------------------------------------------------------~~e~ 615 (951)
T KOG0207|consen 591 GTLTEGKPTVVDFKSLSNPIS-------------------------------------------------------LKEA 615 (951)
T ss_pred CceecceEEEEEEEecCCccc-------------------------------------------------------HHHH
Confidence 999999999999875443210 1223
Q ss_pred HHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCC
Q 001017 509 LRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSS 588 (1189)
Q Consensus 509 ~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~ 588 (1189)
+...+. .|..++||...|++++|++.. ..++...+......+|++
T Consensus 616 l~~v~a--------------~Es~SeHPig~AIv~yak~~~-----~~~~~~~~~~~~~~pg~g---------------- 660 (951)
T KOG0207|consen 616 LALVAA--------------MESGSEHPIGKAIVDYAKEKL-----VEPNPEGVLSFEYFPGEG---------------- 660 (951)
T ss_pred HHHHHH--------------HhcCCcCchHHHHHHHHHhcc-----cccCccccceeecccCCC----------------
Confidence 322221 122368999999999999876 112222222222222332
Q ss_pred CceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhh
Q 001017 589 RKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKN 668 (1189)
Q Consensus 589 rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~ 668 (1189)
+...+.+ +++- .+-|.-+-|.. ++....++.++.+++....|..+.+++
T Consensus 661 -~~~~~~~---~~~~--i~iGN~~~~~r----~~~~~~~~i~~~~~~~e~~g~tvv~v~--------------------- 709 (951)
T KOG0207|consen 661 -IYVTVTV---DGNE--VLIGNKEWMSR----NGCSIPDDILDALTESERKGQTVVYVA--------------------- 709 (951)
T ss_pred -cccceEE---eeeE--EeechHHHHHh----cCCCCchhHHHhhhhHhhcCceEEEEE---------------------
Confidence 1111111 2222 22355444432 233345567888888899999999999
Q ss_pred hhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEE
Q 001017 669 SVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVI 748 (1189)
Q Consensus 669 ~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~ 748 (1189)
.|-+++|+++++|++|+|+..+|+.|++.||++.|+|||+..||.++|+++|+-
T Consensus 710 ------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~-------- 763 (951)
T KOG0207|consen 710 ------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID-------- 763 (951)
T ss_pred ------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc--------
Confidence 677899999999999999999999999999999999999999999999999952
Q ss_pred EeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhcccee
Q 001017 749 ISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV 828 (1189)
Q Consensus 749 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~v 828 (1189)
.
T Consensus 764 -------------------------------------------------------------------------------~ 764 (951)
T KOG0207|consen 764 -------------------------------------------------------------------------------N 764 (951)
T ss_pred -------------------------------------------------------------------------------e
Confidence 1
Q ss_pred EEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHHHHHhhh
Q 001017 829 ICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGH 906 (1189)
Q Consensus 829 v~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~lll~~GR 906 (1189)
|+|.+.|+||.+.|+.+|+ .++.|+|+|||.||+|+|.+|||||+|+.. ...|.++||++++..+. +... +.-+|
T Consensus 765 V~aev~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPALA~AdVGIaig~g-s~vAieaADIVLmrn~L~~v~~a-i~LSr 841 (951)
T KOG0207|consen 765 VYAEVLPEQKAEKIKEIQK-NGGPVAMVGDGINDAPALAQADVGIAIGAG-SDVAIEAADIVLMRNDLRDVPFA-IDLSR 841 (951)
T ss_pred EEeccCchhhHHHHHHHHh-cCCcEEEEeCCCCccHHHHhhccceeeccc-cHHHHhhCCEEEEccchhhhHHH-HHHHH
Confidence 9999999999999999999 789999999999999999999999999643 34499999999998654 4444 77899
Q ss_pred hhhhhhhHhHHHHHHHHHHHHHHHHH
Q 001017 907 WCYRRISSMICYFFYKNIAFGFTLFF 932 (1189)
Q Consensus 907 ~~~~~i~~~i~~~~~kni~~~~~~~~ 932 (1189)
...+|++.++.|++.+|++.+.+...
T Consensus 842 kt~~rIk~N~~~A~~yn~~~IpIAag 867 (951)
T KOG0207|consen 842 KTVKRIKLNFVWALIYNLVGIPIAAG 867 (951)
T ss_pred HHHhhHHHHHHHHHHHHHhhhhhhee
Confidence 99999999999999999886555443
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-60 Score=576.63 Aligned_cols=503 Identities=21% Similarity=0.241 Sum_probs=395.4
Q ss_pred CCccchhhhhhHHHHHhhHHHHHHHHHhhhhHHH---hcceEEEEecCC-eEEEeecccCccccEEEeccCCcCCccEEE
Q 001017 102 SAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEV---NNRKVKVHCGEG-AFDYTKWRDLKVGDVVKVEKDEFFPADLIL 177 (1189)
Q Consensus 102 ~~~~~~~~l~~vl~~s~i~~~~~d~~~~~~~~~~---n~~~~~v~~r~g-~~~~i~~~~l~vGDII~l~~ge~iPaD~vl 177 (1189)
+.|.....++++++++...+.+.+++..+..+++ ++..++|+ |+| +++++++++|+|||+|.|++||.|||||++
T Consensus 16 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~-r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v 94 (556)
T TIGR01525 16 GLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVL-QGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVV 94 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCCeEEEEEHHHCCCCCEEEECCCCEeccceEE
Confidence 4455566666666666666666665555554443 35789999 885 999999999999999999999999999999
Q ss_pred eecccCCceEEEEecCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccc
Q 001017 178 LSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLL 257 (1189)
Q Consensus 178 L~~s~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~ 257 (1189)
++|+ +.||||.||||+.|+.|++++.. |+||.+.+|.
T Consensus 95 i~g~-----~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~g~----------- 131 (556)
T TIGR01525 95 ISGE-----SEVDESALTGESMPVEKKEGDEV---------------------------FAGTINGDGS----------- 131 (556)
T ss_pred Eecc-----eEEeehhccCCCCCEecCCcCEE---------------------------eeceEECCce-----------
Confidence 9997 89999999999999999987644 9999999998
Q ss_pred cCceeecCCeEEEEEEEeccccceec---cCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCccc
Q 001017 258 RDSKLRNTDCIYGAVIFTGRDTKVFQ---NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKM 334 (1189)
Q Consensus 258 rgs~l~nt~~~~gvVv~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 334 (1189)
++++|+.||.+|.+.+ ....+..+++++++.+++++.+++++.++++++.++++.+....
T Consensus 132 ----------~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~------- 194 (556)
T TIGR01525 132 ----------LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGAL------- 194 (556)
T ss_pred ----------EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------
Confidence 9999999999996543 34455667899999999999999999988888887765432110
Q ss_pred ccccccCCCCCCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchh
Q 001017 335 KRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLN 414 (1189)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~ 414 (1189)
..+..++.+++..|||+|+++++++...+..++ .++++++|+++.+
T Consensus 195 ------------------------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~~~~l 240 (556)
T TIGR01525 195 ------------------------GALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKGGDAL 240 (556)
T ss_pred ------------------------hHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecCchHH
Confidence 267888999999999999999999999999988 8899999999999
Q ss_pred hhccCeeEEEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcC
Q 001017 415 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNG 494 (1189)
Q Consensus 415 E~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 494 (1189)
|.||++|++|||||||||+|+|++.++...+... .
T Consensus 241 e~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~---~------------------------------------------ 275 (556)
T TIGR01525 241 EKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS---I------------------------------------------ 275 (556)
T ss_pred HHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC---c------------------------------------------
Confidence 9999999999999999999999999886433210 0
Q ss_pred CCCCCCchHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCccee
Q 001017 495 SWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVE 574 (1189)
Q Consensus 495 ~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~ 574 (1189)
. ..+++..++.+. ..+.||.+.|+++++++.|..... +. .+
T Consensus 276 ------~---~~~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~~~~~~--~~--~~------------ 316 (556)
T TIGR01525 276 ------S---EEELLALAAALE--------------QSSSHPLARAIVRYAKKRGLELPK--QE--DV------------ 316 (556)
T ss_pred ------c---HHHHHHHHHHHh--------------ccCCChHHHHHHHHHHhcCCCccc--cc--Ce------------
Confidence 0 012222222221 125799999999999987653211 00 00
Q ss_pred EEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHH
Q 001017 575 RSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEK 654 (1189)
Q Consensus 575 ~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~ 654 (1189)
. .+ ..+.+...+ +|. ..+..|+++.+ + ... ....+..+.++.++.+|+|++.++
T Consensus 317 ~------~~----~~~gi~~~~---~g~-~~~~lg~~~~~-~---~~~-~~~~~~~~~~~~~~~~g~~~~~v~------- 370 (556)
T TIGR01525 317 E------EV----PGKGVEATV---DGQ-EEVRIGNPRLL-E---LAA-EPISASPDLLNEGESQGKTVVFVA------- 370 (556)
T ss_pred e------Ee----cCCeEEEEE---CCe-eEEEEecHHHH-h---hcC-CCchhhHHHHHHHhhCCcEEEEEE-------
Confidence 0 00 011222222 231 22334777655 1 111 112223456777889999999998
Q ss_pred HHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcC-CeEEEEcCCChhhHHHH
Q 001017 655 EYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINI 733 (1189)
Q Consensus 655 e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aG-Ikv~mlTGD~~~ta~~i 733 (1189)
.|.+++|.+.++|+++||++++|+.|+++| ++++|+|||+..++..+
T Consensus 371 --------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i 418 (556)
T TIGR01525 371 --------------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAV 418 (556)
T ss_pred --------------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHH
Confidence 567899999999999999999999999999 99999999999999999
Q ss_pred HHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHH
Q 001017 734 GFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDD 813 (1189)
Q Consensus 734 a~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~ 813 (1189)
++++|+..
T Consensus 419 ~~~lgi~~------------------------------------------------------------------------ 426 (556)
T TIGR01525 419 AAELGIDE------------------------------------------------------------------------ 426 (556)
T ss_pred HHHhCCCe------------------------------------------------------------------------
Confidence 99999821
Q ss_pred HHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 814 VKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 814 ~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
+|+++.|++|..+++.+++ .++.|+|+|||.||++|+++||+||+++ .....++..||+++.+
T Consensus 427 ---------------~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~ 489 (556)
T TIGR01525 427 ---------------VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLN 489 (556)
T ss_pred ---------------eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeC
Confidence 7888999999999999997 6889999999999999999999999996 3344478899999996
Q ss_pred --chhhHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHH
Q 001017 894 --FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 931 (1189)
Q Consensus 894 --f~~l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~ 931 (1189)
+..+..+ +..||..++++++++.|.+.+|++.+...+
T Consensus 490 ~~~~~l~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 490 DDLSSLPTA-IDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred CCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4447777 899999999999999999999998865554
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-59 Score=565.23 Aligned_cols=495 Identities=21% Similarity=0.264 Sum_probs=389.2
Q ss_pred HHHHHHhccccCCCCCCccchhhhhhHHHHHhhHHHHHHHHHhhhhHHH---hcceEEEEecCCeEEEeecccCccccEE
Q 001017 87 FLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEV---NNRKVKVHCGEGAFDYTKWRDLKVGDVV 163 (1189)
Q Consensus 87 fl~~~il~~~~~~~~~~~~~~~~l~~vl~~s~i~~~~~d~~~~~~~~~~---n~~~~~v~~r~g~~~~i~~~~l~vGDII 163 (1189)
++++++++++ .+.|.....++++++++...+.++++|..+..+.+ ++++++|+ |||+++++++++|+|||+|
T Consensus 5 ~~~a~~~~~~----~~~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~-r~g~~~~i~~~~l~~GDiv 79 (536)
T TIGR01512 5 MALAALGAVA----IGEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVL-RGGSLEEVAVEELKVGDVV 79 (536)
T ss_pred HHHHHHHHHH----HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCEEEEEEHHHCCCCCEE
Confidence 4445555555 23445555566666666666666665555554433 47889999 9999999999999999999
Q ss_pred EeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEE
Q 001017 164 KVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLEL 243 (1189)
Q Consensus 164 ~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~ 243 (1189)
.|++||.+||||++++|+ +.||||+||||+.|+.|.+++.. |+||.+.
T Consensus 80 ~v~~G~~iP~Dg~ii~g~-----~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~ 127 (536)
T TIGR01512 80 VVKPGERVPVDGVVLSGT-----STVDESALTGESVPVEKAPGDEV---------------------------FAGAINL 127 (536)
T ss_pred EEcCCCEeecceEEEeCc-----EEEEecccCCCCCcEEeCCCCEE---------------------------EeeeEEC
Confidence 999999999999999997 89999999999999999987644 9999999
Q ss_pred cCccccCCCCcccccCceeecCCeEEEEEEEecccccee---ccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001017 244 EEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF---QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIF 320 (1189)
Q Consensus 244 ~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~ 320 (1189)
+|. ++++|+.||.+|.+. .....+..+++++++.++++..++.++.++++++.+++
T Consensus 128 ~G~---------------------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (536)
T TIGR01512 128 DGV---------------------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLV 186 (536)
T ss_pred Cce---------------------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 999999999999654 33445566789999999999999999988888877766
Q ss_pred HhhhccccccCcccccccccCCCCCCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccc
Q 001017 321 FGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYE 400 (1189)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~ 400 (1189)
+.+... | ...+.+++.++...|||+|+++++++...+..++
T Consensus 187 ~~~~~~----------~--------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~--------- 227 (536)
T TIGR01512 187 PGLLKR----------W--------------------PFWVYRALVLLVVASPCALVISAPAAYLSAISAA--------- 227 (536)
T ss_pred HHHhcc----------c--------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH---------
Confidence 543211 1 0167778899999999999999999999999988
Q ss_pred ccCCcccccCcchhhhccCeeEEEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccc
Q 001017 401 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 480 (1189)
Q Consensus 401 ~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1189)
.++++++|+++.+|.||+++++|||||||||+|+|++.++...
T Consensus 228 -~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~------------------------------------ 270 (536)
T TIGR01512 228 -ARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA------------------------------------ 270 (536)
T ss_pred -HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH------------------------------------
Confidence 8999999999999999999999999999999999999876410
Q ss_pred cCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCcee
Q 001017 481 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 560 (1189)
Q Consensus 481 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~ 560 (1189)
+++...+.+ +..+.||.+.|+++++++.+ .+ +.
T Consensus 271 --------------------------~~l~~a~~~--------------e~~~~hp~~~Ai~~~~~~~~-~~-----~~- 303 (536)
T TIGR01512 271 --------------------------EVLRLAAAA--------------EQASSHPLARAIVDYARKRE-NV-----ES- 303 (536)
T ss_pred --------------------------HHHHHHHHH--------------hccCCCcHHHHHHHHHHhcC-CC-----cc-
Confidence 122222211 11257999999999998754 00 00
Q ss_pred EEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhcc
Q 001017 561 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 640 (1189)
Q Consensus 561 ~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~G 640 (1189)
+ ...+| +.+...+ +|..++ .|+++.+.+. + ...+..+|
T Consensus 304 -~---~~~~g-------------------~gi~~~~---~g~~~~--ig~~~~~~~~----~----------~~~~~~~~ 341 (536)
T TIGR01512 304 -V---EEVPG-------------------EGVRAVV---DGGEVR--IGNPRSLEAA----V----------GARPESAG 341 (536)
T ss_pred -e---EEecC-------------------CeEEEEE---CCeEEE--EcCHHHHhhc----C----------CcchhhCC
Confidence 0 00011 1122111 343332 4776544221 0 01456678
Q ss_pred CeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCC-eE
Q 001017 641 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI-KL 719 (1189)
Q Consensus 641 lr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGI-kv 719 (1189)
.+++.++ .|..++|.+.++|++|+|++++|+.|+++|+ ++
T Consensus 342 ~~~~~v~---------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v 382 (536)
T TIGR01512 342 KTIVHVA---------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKV 382 (536)
T ss_pred CeEEEEE---------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcE
Confidence 8887776 6778999999999999999999999999999 99
Q ss_pred EEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEE
Q 001017 720 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 799 (1189)
Q Consensus 720 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 799 (1189)
+|+|||+..+|..+++++|+..
T Consensus 383 ~vvTgd~~~~a~~i~~~lgi~~---------------------------------------------------------- 404 (536)
T TIGR01512 383 VMLTGDRRAVAERVARELGIDE---------------------------------------------------------- 404 (536)
T ss_pred EEEcCCCHHHHHHHHHHcCChh----------------------------------------------------------
Confidence 9999999999999999999831
Q ss_pred EEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCc
Q 001017 800 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 879 (1189)
Q Consensus 800 vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~ 879 (1189)
+++++.|++|..+++.+++ .++.|+|+|||.||++|+++||+||+++...
T Consensus 405 -----------------------------~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~~~ 454 (536)
T TIGR01512 405 -----------------------------VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPALAAADVGIAMGASG 454 (536)
T ss_pred -----------------------------hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHhCCEEEEeCCCc
Confidence 6778889999999999998 7899999999999999999999999996333
Q ss_pred chhhhhccccccc--cchhhHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHH
Q 001017 880 GMQAVMSSDIAIA--QFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF 932 (1189)
Q Consensus 880 ~~~a~~~sD~~i~--~f~~l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~ 932 (1189)
...++.+||+++. ++.-+..+ +..||..++++++++.|.+.+|++.+...++
T Consensus 455 ~~~~~~~ad~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 455 SDVAIETADVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred cHHHHHhCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4448899999995 46667777 8999999999999999999999887666553
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-58 Score=561.89 Aligned_cols=485 Identities=21% Similarity=0.274 Sum_probs=381.2
Q ss_pred CccchhhhhhHHHHHhhHHHHHHHHHhhhh---HHH---hcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEE
Q 001017 103 AVSNVLPLVVVIGATMGKEVLEDWRRKKQD---IEV---NNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLI 176 (1189)
Q Consensus 103 ~~~~~~~l~~vl~~s~i~~~~~d~~~~~~~---~~~---n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~v 176 (1189)
++.....+++++.++ +++|++.++|+. +.+ .+.++++++++|.+++|+.++|+|||+|.|++||.|||||+
T Consensus 53 ~~~~~~~i~~~~~~g---~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~ 129 (562)
T TIGR01511 53 FFDASAMLITFILLG---RWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGT 129 (562)
T ss_pred hHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceE
Confidence 344444444444444 455555444443 333 36789998335778999999999999999999999999999
Q ss_pred EeecccCCceEEEEecCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCccc
Q 001017 177 LLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLL 256 (1189)
Q Consensus 177 lL~~s~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l 256 (1189)
+++|+ +.||||.||||+.|+.|++++.. |+||++.+|.
T Consensus 130 v~~g~-----~~vdes~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~g~---------- 167 (562)
T TIGR01511 130 VIEGE-----SEVDESLVTGESLPVPKKVGDPV---------------------------IAGTVNGTGS---------- 167 (562)
T ss_pred EEECc-----eEEehHhhcCCCCcEEcCCCCEE---------------------------EeeeEECCce----------
Confidence 99998 89999999999999999998765 9999999998
Q ss_pred ccCceeecCCeEEEEEEEeccccce---eccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcc
Q 001017 257 LRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGK 333 (1189)
Q Consensus 257 ~rgs~l~nt~~~~gvVv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~ 333 (1189)
+++.|+.||.+|.+ .+...+++.+++++++.++++..++++++++++++.+++|.
T Consensus 168 -----------~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~----------- 225 (562)
T TIGR01511 168 -----------LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL----------- 225 (562)
T ss_pred -----------EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 99999999999955 44445667778999999999999999988888877765542
Q ss_pred cccccccCCCCCCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcch
Q 001017 334 MKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNL 413 (1189)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~ 413 (1189)
..+.+++++++..|||+|+++++++...+..++ +++|+++|+.+.
T Consensus 226 -------------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~ 270 (562)
T TIGR01511 226 -------------------------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDA 270 (562)
T ss_pred -------------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHH
Confidence 157778999999999999999999999999888 889999999999
Q ss_pred hhhccCeeEEEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhc
Q 001017 414 NEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMN 493 (1189)
Q Consensus 414 ~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 493 (1189)
+|.|+++|+||||||||||+|+|++.++...+.. .
T Consensus 271 lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-----~---------------------------------------- 305 (562)
T TIGR01511 271 LERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-----D---------------------------------------- 305 (562)
T ss_pred HHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC-----C----------------------------------------
Confidence 9999999999999999999999999987532210 0
Q ss_pred CCCCCCCchHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcce
Q 001017 494 GSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKV 573 (1189)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~ 573 (1189)
.++++..++.+ +..+.||.+.|+++++++.|..... +......+|+|
T Consensus 306 -----------~~~~l~~aa~~--------------e~~s~HPia~Ai~~~~~~~~~~~~~-------~~~~~~~~g~G- 352 (562)
T TIGR01511 306 -----------RTELLALAAAL--------------EAGSEHPLAKAIVSYAKEKGITLVE-------VSDFKAIPGIG- 352 (562)
T ss_pred -----------HHHHHHHHHHH--------------hccCCChHHHHHHHHHHhcCCCcCC-------CCCeEEECCce-
Confidence 01223222211 1225799999999999887653211 00000111222
Q ss_pred eEEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCH
Q 001017 574 ERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDE 653 (1189)
Q Consensus 574 ~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~ 653 (1189)
+...+ +|+ .+..|+++.+.+. +.. +.++.++|.+++.++
T Consensus 353 ------------------i~~~~---~g~--~~~iG~~~~~~~~----~~~--------~~~~~~~g~~~~~~~------ 391 (562)
T TIGR01511 353 ------------------VEGTV---EGT--KIQLGNEKLLGEN----AIK--------IDGKAEQGSTSVLVA------ 391 (562)
T ss_pred ------------------EEEEE---CCE--EEEEECHHHHHhC----CCC--------CChhhhCCCEEEEEE------
Confidence 22222 332 2345887765331 111 112356899998887
Q ss_pred HHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHH
Q 001017 654 KEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINI 733 (1189)
Q Consensus 654 ~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~i 733 (1189)
.|.+++|.++++|++|||++++|+.|++.|++++|+|||+..+|..+
T Consensus 392 ---------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~i 438 (562)
T TIGR01511 392 ---------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAV 438 (562)
T ss_pred ---------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHH
Confidence 67889999999999999999999999999999999999999999999
Q ss_pred HHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHH
Q 001017 734 GFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDD 813 (1189)
Q Consensus 734 a~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~ 813 (1189)
++++|+.
T Consensus 439 a~~lgi~------------------------------------------------------------------------- 445 (562)
T TIGR01511 439 AKELGIN------------------------------------------------------------------------- 445 (562)
T ss_pred HHHcCCc-------------------------------------------------------------------------
Confidence 9999981
Q ss_pred HHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 814 VKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 814 ~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
+++++.|++|.++++.+++ .++.|+|+|||.||++|+++||+||+++. ....++.+||+++.+
T Consensus 446 ---------------~~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vgia~g~-g~~~a~~~Advvl~~ 508 (562)
T TIGR01511 446 ---------------VRAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALAQADVGIAIGA-GTDVAIEAADVVLMR 508 (562)
T ss_pred ---------------EEccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHhhCCEEEEeCC-cCHHHHhhCCEEEeC
Confidence 5667789999999999998 78899999999999999999999999964 334488999999984
Q ss_pred --chhhHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHH
Q 001017 894 --FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF 932 (1189)
Q Consensus 894 --f~~l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~ 932 (1189)
.+.+..+ +..||..++++++++.|.+.+|++.+.+.+.
T Consensus 509 ~~l~~l~~~-i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~ 548 (562)
T TIGR01511 509 NDLNDVATA-IDLSRKTLRRIKQNLLWAFGYNVIAIPIAAG 548 (562)
T ss_pred CCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5557777 8999999999999999999999987655543
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-57 Score=572.55 Aligned_cols=484 Identities=18% Similarity=0.221 Sum_probs=385.1
Q ss_pred hHHHHHHHHHhhhhHHH------hcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEec
Q 001017 119 GKEVLEDWRRKKQDIEV------NNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETT 192 (1189)
Q Consensus 119 i~~~~~d~~~~~~~~~~------n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s 192 (1189)
+-+++|++-+.|+.+.+ .++.++++ |+|.+++|+.++|+|||+|.|++||.|||||++++|+ +.||||
T Consensus 298 ~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~-~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-----~~vdeS 371 (834)
T PRK10671 298 LGHMLEARARQRSSKALEKLLDLTPPTARVV-TDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGE-----AWLDEA 371 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCEEEEE-eCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEce-----EEEeeh
Confidence 44556665555554433 36889999 8999999999999999999999999999999999997 899999
Q ss_pred CCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEE
Q 001017 193 NLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAV 272 (1189)
Q Consensus 193 ~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvV 272 (1189)
.||||+.|+.|.+++.. |+||++.+|. +.+.|
T Consensus 372 ~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~G~---------------------~~~~v 403 (834)
T PRK10671 372 MLTGEPIPQQKGEGDSV---------------------------HAGTVVQDGS---------------------VLFRA 403 (834)
T ss_pred hhcCCCCCEecCCCCEE---------------------------Eecceeccee---------------------EEEEE
Confidence 99999999999998765 9999999998 99999
Q ss_pred EEeccccce---eccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccC
Q 001017 273 IFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYD 349 (1189)
Q Consensus 273 v~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (1189)
+.+|.+|.+ ....++++..++++++..+++..++++++++++++.+++|.+... +
T Consensus 404 ~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~----------~------------ 461 (834)
T PRK10671 404 SAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP----------A------------ 461 (834)
T ss_pred EEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------c------------
Confidence 999999954 444555666789999999999999999999888888777643211 0
Q ss_pred chhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCc
Q 001017 350 PKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTG 429 (1189)
Q Consensus 350 ~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTG 429 (1189)
..+...+..++++++..|||+|+++++++...+..++ +++|+++|+.+.+|.||+++++||||||
T Consensus 462 -----~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le~l~~v~~v~fDKTG 526 (834)
T PRK10671 462 -----PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQRASTLDTLVFDKTG 526 (834)
T ss_pred -----hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHHhhcCCCEEEEcCCC
Confidence 0112367778999999999999999999999999988 8999999999999999999999999999
Q ss_pred cccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHH
Q 001017 430 TLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFL 509 (1189)
Q Consensus 430 TLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 509 (1189)
|||+|+|++.++...+.. .+ .+++
T Consensus 527 TLT~g~~~v~~~~~~~~~-----~~---------------------------------------------------~~~l 550 (834)
T PRK10671 527 TLTEGKPQVVAVKTFNGV-----DE---------------------------------------------------AQAL 550 (834)
T ss_pred ccccCceEEEEEEccCCC-----CH---------------------------------------------------HHHH
Confidence 999999999887532210 00 1122
Q ss_pred H-HHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCC
Q 001017 510 R-LLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSS 588 (1189)
Q Consensus 510 ~-~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~ 588 (1189)
. +.+++. .+.||.+.|++++++..... . +......+|.|
T Consensus 551 ~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~--~-------~~~~~~~~g~G---------------- 590 (834)
T PRK10671 551 RLAAALEQ---------------GSSHPLARAILDKAGDMTLP--Q-------VNGFRTLRGLG---------------- 590 (834)
T ss_pred HHHHHHhC---------------CCCCHHHHHHHHHHhhCCCC--C-------cccceEecceE----------------
Confidence 2 222221 25799999999988643210 0 00000011111
Q ss_pred CceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhh
Q 001017 589 RKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKN 668 (1189)
Q Consensus 589 rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~ 668 (1189)
+...+ +|+. +.+|+++.+.+.. ...+.+.+.+++++.+|.+++++|
T Consensus 591 ---v~~~~---~g~~--~~~G~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~v~va--------------------- 636 (834)
T PRK10671 591 ---VSGEA---EGHA--LLLGNQALLNEQQ-----VDTKALEAEITAQASQGATPVLLA--------------------- 636 (834)
T ss_pred ---EEEEE---CCEE--EEEeCHHHHHHcC-----CChHHHHHHHHHHHhCCCeEEEEE---------------------
Confidence 11111 4443 4559988764321 112345666778889999999998
Q ss_pred hhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEE
Q 001017 669 SVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVI 748 (1189)
Q Consensus 669 ~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~ 748 (1189)
.|..++|+++++|++|||++++|+.|++.|++++|+|||+..+|..+++++|+..
T Consensus 637 ------------------~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------- 691 (834)
T PRK10671 637 ------------------VDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------- 691 (834)
T ss_pred ------------------ECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-------
Confidence 4557999999999999999999999999999999999999999999999999831
Q ss_pred EeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhcccee
Q 001017 749 ISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV 828 (1189)
Q Consensus 749 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~v 828 (1189)
T Consensus 692 -------------------------------------------------------------------------------- 691 (834)
T PRK10671 692 -------------------------------------------------------------------------------- 691 (834)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHHHHHhhh
Q 001017 829 ICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGH 906 (1189)
Q Consensus 829 v~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~lll~~GR 906 (1189)
+++++.|++|.++++.++. .++.|+|+|||.||++|+++||+||+|++ ..+.++++||+++.+.++ +..+ +..||
T Consensus 692 ~~~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgia~g~-g~~~a~~~ad~vl~~~~~~~i~~~-i~l~r 768 (834)
T PRK10671 692 VIAGVLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPALAQADVGIAMGG-GSDVAIETAAITLMRHSLMGVADA-LAISR 768 (834)
T ss_pred EEeCCCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeEEecC-CCHHHHHhCCEEEecCCHHHHHHH-HHHHH
Confidence 7788999999999999998 78899999999999999999999999964 445589999999987444 6666 89999
Q ss_pred hhhhhhhHhHHHHHHHHHHHHHHHH
Q 001017 907 WCYRRISSMICYFFYKNIAFGFTLF 931 (1189)
Q Consensus 907 ~~~~~i~~~i~~~~~kni~~~~~~~ 931 (1189)
..++++++++.|.+.+|++.+...+
T Consensus 769 ~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 769 ATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988765443
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-50 Score=440.45 Aligned_cols=566 Identities=20% Similarity=0.248 Sum_probs=401.1
Q ss_pred hhhhhHHHHHhhHHHHHHHHHhhhhHHHh----cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccC
Q 001017 108 LPLVVVIGATMGKEVLEDWRRKKQDIEVN----NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYE 183 (1189)
Q Consensus 108 ~~l~~vl~~s~i~~~~~d~~~~~~~~~~n----~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~ 183 (1189)
+.|+|.+++..+-|++.+-|-+.+-..+. ...++++..+|.++.+++.+|+.||+|.|+.||.||+||.+++|.
T Consensus 70 ~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~-- 147 (681)
T COG2216 70 IILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGV-- 147 (681)
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeee--
Confidence 44555666666667777666554433332 344666634599999999999999999999999999999999999
Q ss_pred CceEEEEecCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceee
Q 001017 184 EAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLR 263 (1189)
Q Consensus 184 ~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~ 263 (1189)
++||||++||||.|+.|.++-... + +--|+++.
T Consensus 148 ---asVdESAITGESaPViresGgD~s----------------------------s----------------VtGgT~v~ 180 (681)
T COG2216 148 ---ASVDESAITGESAPVIRESGGDFS----------------------------S----------------VTGGTRVL 180 (681)
T ss_pred ---eecchhhccCCCcceeeccCCCcc----------------------------c----------------ccCCcEEe
Confidence 899999999999999999975431 1 11233343
Q ss_pred cCCeEEEEEEEecccc---ceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCccccccccc
Q 001017 264 NTDCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLR 340 (1189)
Q Consensus 264 nt~~~~gvVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 340 (1189)
++|++..++..-.+| |+....+.+..+++|-|-.++.+...+.++.++.. ++..-+..|.. +
T Consensus 181 -SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~-~Tl~p~a~y~~-------------g 245 (681)
T COG2216 181 -SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAV-ATLYPFAIYSG-------------G 245 (681)
T ss_pred -eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHH-HhhhhHHHHcC-------------C
Confidence 588999999888888 44555678888899988887766555443322221 11111111110 0
Q ss_pred CCCCCCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCe
Q 001017 341 PDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420 (1189)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v 420 (1189)
. -..+..-+.+++++||..+.-.++-.-..++-|+ .+.+++.++..++|..|.|
T Consensus 246 ~----------------~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv----------~~~NViA~SGRAVEaaGDv 299 (681)
T COG2216 246 G----------------AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV----------TQFNVIATSGRAVEAAGDV 299 (681)
T ss_pred C----------------CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHh----------hhhceeecCcchhhhcCCc
Confidence 0 0134556678889999998887777777777777 7889999999999999999
Q ss_pred eEEEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCC
Q 001017 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEP 500 (1189)
Q Consensus 421 ~~i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 500 (1189)
|+++.|||||+|-|+-.-...+..+..
T Consensus 300 dtliLDKTGTIT~GnR~A~~f~p~~gv----------------------------------------------------- 326 (681)
T COG2216 300 DTLLLDKTGTITLGNRQASEFIPVPGV----------------------------------------------------- 326 (681)
T ss_pred cEEEecccCceeecchhhhheecCCCC-----------------------------------------------------
Confidence 999999999999766544333321110
Q ss_pred chHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEe
Q 001017 501 HADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLL 580 (1189)
Q Consensus 501 ~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il 580 (1189)
..+++..+..+++-. .+-|+...+|+.|++.|+....+.. . ...
T Consensus 327 ---~~~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~~~~~~-----------------~--~~~ 370 (681)
T COG2216 327 ---SEEELADAAQLASLA--------------DETPEGRSIVELAKKLGIELREDDL-----------------Q--SHA 370 (681)
T ss_pred ---CHHHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCCCcccc-----------------c--ccc
Confidence 012344444443321 3578889999999998865433110 0 023
Q ss_pred eeecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHH
Q 001017 581 NVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFN 660 (1189)
Q Consensus 581 ~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~ 660 (1189)
...||+.+.+...+-.. ++ .-+.|||...|.+.....+.+.+++++...++-+..|-.+|+++
T Consensus 371 ~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~------------- 433 (681)
T COG2216 371 EFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVV------------- 433 (681)
T ss_pred eeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEE-------------
Confidence 45799888765555443 33 66789999999999887777789999999999999999999999
Q ss_pred HHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 661 EEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 661 ~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
.|-+++|++.++|-+++|.+|-+.+||+.|||++|+|||++.||..||.+.|+.
T Consensus 434 --------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD 487 (681)
T COG2216 434 --------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 487 (681)
T ss_pred --------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch
Confidence 677899999999999999999999999999999999999999999999999983
Q ss_pred cCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHH
Q 001017 741 RQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLE 820 (1189)
Q Consensus 741 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~ 820 (1189)
+
T Consensus 488 d------------------------------------------------------------------------------- 488 (681)
T COG2216 488 D------------------------------------------------------------------------------- 488 (681)
T ss_pred h-------------------------------------------------------------------------------
Confidence 2
Q ss_pred HHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hH
Q 001017 821 LAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LE 898 (1189)
Q Consensus 821 ~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~ 898 (1189)
..++++|++|.++++.-|. .|+.|+|+|||.||+|+|.+||||++|. +....|+++++.+=+|-+. |.
T Consensus 489 --------fiAeatPEdK~~~I~~eQ~-~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKli 558 (681)
T COG2216 489 --------FIAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLI 558 (681)
T ss_pred --------hhhcCChHHHHHHHHHHHh-cCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCcccee
Confidence 6788999999999999998 8999999999999999999999999994 2222389999998777554 33
Q ss_pred HHHHHhhhhhhhhhhHhHHHHHHHHHHH---HHHHHHHHhhcccc------cccchhh-HHHHHHHHHHh--hHHHHhhh
Q 001017 899 RLLLVHGHWCYRRISSMICYFFYKNIAF---GFTLFFFEAYASFS------GQPVYND-WFLSLYNVFFT--SLPVIALG 966 (1189)
Q Consensus 899 ~lll~~GR~~~~~i~~~i~~~~~kni~~---~~~~~~~~~~~~~s------g~~~~~~-~~~l~~n~i~~--~lp~~~l~ 966 (1189)
.. +.-|++....-..+..|++.--++- +++.+++.++.... ..++.+. ..-+.||.++. .+|.-+-|
T Consensus 559 ev-V~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~~lNiM~L~sP~SAilSAlIfNAlIIv~LIPLAlkG 637 (681)
T COG2216 559 EV-VEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLGALNIMHLHSPQSAILSALIFNALIIVALIPLALKG 637 (681)
T ss_pred hH-hhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhcccccceeecccCCcHHHHHHHHHHHHHHHHHhHHHHhcC
Confidence 33 5568877655555555555444332 23444554442111 1122222 23355665442 23444445
Q ss_pred hcccCCChHHHh-hCccchh
Q 001017 967 VFDQDVSARFCL-KFPLLYQ 985 (1189)
Q Consensus 967 ~~~~~~~~~~~~-~~P~ly~ 985 (1189)
+..+..+...++ |+--+|.
T Consensus 638 Vkyk~~~a~~lL~rNl~iYG 657 (681)
T COG2216 638 VKYKPLSASALLRRNLLIYG 657 (681)
T ss_pred cccccCCHHHHHhhCeEEEe
Confidence 555555554433 3344443
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=275.61 Aligned_cols=221 Identities=27% Similarity=0.381 Sum_probs=184.8
Q ss_pred hhhHHHHHhhHHHHHHHHHhhhhHHHh---cce-EEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEee-cccCC
Q 001017 110 LVVVIGATMGKEVLEDWRRKKQDIEVN---NRK-VKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLS-SSYEE 184 (1189)
Q Consensus 110 l~~vl~~s~i~~~~~d~~~~~~~~~~n---~~~-~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~-~s~~~ 184 (1189)
|+++++++.+.+.++++++++..++++ +.+ ++|+ |||++++++|++|+|||||+|++||.+||||++|+ ++
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~-r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~--- 77 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVI-RDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS--- 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEE-ETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE---
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEE-eccccccchHhhccceeeeecccccccccCccceeccc---
Confidence 567788888899999999999988875 344 8899 99999999999999999999999999999999999 55
Q ss_pred ceEEEEecCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeec
Q 001017 185 AICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRN 264 (1189)
Q Consensus 185 g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~n 264 (1189)
|+||||+||||+.|+.|.+. +++..|++++||.+.
T Consensus 78 --~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~- 112 (230)
T PF00122_consen 78 --AYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV- 112 (230)
T ss_dssp --EEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-
T ss_pred --cccccccccccccccccccc------------------------------------------cccccchhhcccccc-
Confidence 99999999999999999873 456778999999999
Q ss_pred CCeEEEEEEEeccccceecc---CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccC
Q 001017 265 TDCIYGAVIFTGRDTKVFQN---STGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRP 341 (1189)
Q Consensus 265 t~~~~gvVv~tG~~Tk~~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 341 (1189)
+||++|+|++||.+|++.+. ...++.+++++++.++++..+++++.++++++++++++++... ..|+
T Consensus 113 ~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--- 182 (230)
T PF00122_consen 113 SGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFNDSG-------ISFF--- 182 (230)
T ss_dssp EEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGSTT-------CHCC---
T ss_pred ccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceecccc-------cccc---
Confidence 88999999999999966433 3456667899999999999999998888888877665542110 1232
Q ss_pred CCCCCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhh
Q 001017 342 DDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEE 416 (1189)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~ 416 (1189)
..+..++.+++.++|++|+++++++...++.++ .++++++|+++.+|.
T Consensus 183 -----------------~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 183 -----------------KSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp -----------------HHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred -----------------cccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 278888999999999999999999999999998 789999999999984
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-21 Score=211.44 Aligned_cols=98 Identities=33% Similarity=0.521 Sum_probs=90.9
Q ss_pred cCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHH
Q 001017 687 KNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKS 766 (1189)
Q Consensus 687 ~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~ 766 (1189)
.++.++|.+.+.|++|++++++|+.|+++|++++|+|||+..+|..+|+++||..
T Consensus 114 ~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~------------------------- 168 (215)
T PF00702_consen 114 VNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD------------------------- 168 (215)
T ss_dssp ESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-------------------------
T ss_pred ecCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-------------------------
Confidence 3788999999999999999999999999999999999999999999999999821
Q ss_pred HHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeC--CcccH--HHHH
Q 001017 767 AAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS--SPKQK--ALVT 842 (1189)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~--sP~qK--~~iV 842 (1189)
..+++++ +|++| .+++
T Consensus 169 ------------------------------------------------------------~~v~a~~~~kP~~k~~~~~i 188 (215)
T PF00702_consen 169 ------------------------------------------------------------SIVFARVIGKPEPKIFLRII 188 (215)
T ss_dssp ------------------------------------------------------------EEEEESHETTTHHHHHHHHH
T ss_pred ------------------------------------------------------------ccccccccccccchhHHHHH
Confidence 3499999 99999 9999
Q ss_pred HHHHhcCCCeEEEEcCCCCChhhhhhcC
Q 001017 843 RLVKTKTSSTTLAIGDGANDVGMLQEAD 870 (1189)
Q Consensus 843 ~~l~~~~~~~vl~iGDG~ND~~ml~~A~ 870 (1189)
+.++. .++.|+|||||.||++|+++||
T Consensus 189 ~~l~~-~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 189 KELQV-KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHTC-TGGGEEEEESSGGHHHHHHHSS
T ss_pred HHHhc-CCCEEEEEccCHHHHHHHHhCc
Confidence 99985 4669999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.9e-13 Score=123.75 Aligned_cols=126 Identities=24% Similarity=0.403 Sum_probs=109.3
Q ss_pred ceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHH
Q 001017 689 LILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAA 768 (1189)
Q Consensus 689 l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 768 (1189)
....+.++---+|=++|+++|++|++. ++|++.|||..-+....|.-.|+...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 467888888889999999999999999 99999999999999999999997321
Q ss_pred HHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc
Q 001017 769 AAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK 848 (1189)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~ 848 (1189)
.+++-..|+.|+.+++.|++
T Consensus 72 -----------------------------------------------------------rv~a~a~~e~K~~ii~eLkk- 91 (152)
T COG4087 72 -----------------------------------------------------------RVFAGADPEMKAKIIRELKK- 91 (152)
T ss_pred -----------------------------------------------------------eeecccCHHHHHHHHHHhcC-
Confidence 18899999999999999998
Q ss_pred CCCeEEEEcCCCCChhhhhhcCeeEEecCCcch--hhhhccccccccchhhHHHH
Q 001017 849 TSSTTLAIGDGANDVGMLQEADIGVGISGVEGM--QAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~--~a~~~sD~~i~~f~~l~~ll 901 (1189)
+++.|.|+|||+||.+||++||+||..-++++. .+..+||+++.+.+-+..++
T Consensus 92 ~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 92 RYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred CCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 889999999999999999999999966565553 24589999998877666653
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.45 E-value=9.6e-14 Score=126.09 Aligned_cols=90 Identities=33% Similarity=0.554 Sum_probs=71.0
Q ss_pred hhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceE
Q 001017 513 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRM 592 (1189)
Q Consensus 513 alC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 592 (1189)
++||++....+++.+..+ ..++|+|.||+.++...|..+.. +..+..+++++.+||||+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 589999876554333322 57899999999999999654321 1235789999999999999999
Q ss_pred EEEEEeCCCeEEEEEecCchHHHHHhhh
Q 001017 593 SVIVRSEEGTLLLLSKGADSVMFERLAE 620 (1189)
Q Consensus 593 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 620 (1189)
+||++ .++.+++|+|||||.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3456888999999999999964
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.8e-09 Score=117.96 Aligned_cols=284 Identities=14% Similarity=0.188 Sum_probs=170.3
Q ss_pred HhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCc-ccccchhh
Q 001017 685 IEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE-SKTLEKSE 763 (1189)
Q Consensus 685 ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~-~~~~~~~~ 763 (1189)
--.+-.|.|++...-+.+.+....|+.|-++.|+.+..+-++.....-+|.++||-..++..+.+..+... ..+....
T Consensus 811 a~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa- 889 (1354)
T KOG4383|consen 811 AFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPA- 889 (1354)
T ss_pred HhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCC-
Confidence 34678899999999999999999999999999999999999999999999999998877776666544311 0111100
Q ss_pred HHHHH-HHHHHHhHHHHHhhh---hhccccCCC-CCCCeEEEEcCchhhhhhhH----------HHHHHHHHHHhcc-ce
Q 001017 764 DKSAA-AAALKASVLHQLIRG---KELLDSSNE-SLGPLALIIDGKSLTYALED----------DVKDLFLELAIGC-AS 827 (1189)
Q Consensus 764 ~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~lvi~G~~l~~~~~~----------~~~~~~~~~~~~~-~~ 827 (1189)
..+.. ++....+...|+... ...+..+.. ......--++.+.-+.+-++ ..+.++.++-..- -+
T Consensus 890 ~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV 969 (1354)
T KOG4383|consen 890 HEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLV 969 (1354)
T ss_pred ChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceee
Confidence 00000 000111111111100 000000000 00000000000000000000 0111111110000 02
Q ss_pred eEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCC--hhhhhhcCeeEEecCCcchh-------------hhhccc----
Q 001017 828 VICCRSSPKQKALVTRLVKTKTSSTTLAIGDGAND--VGMLQEADIGVGISGVEGMQ-------------AVMSSD---- 888 (1189)
Q Consensus 828 vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND--~~ml~~A~vGI~i~g~~~~~-------------a~~~sD---- 888 (1189)
-.|.+++|+.-.++++.+|+ .|++|+++|..+|- .-..-+||++|++..-+... ..+++|
T Consensus 970 ~LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsp 1048 (1354)
T KOG4383|consen 970 GLFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSP 1048 (1354)
T ss_pred eeccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCc
Confidence 36899999999999999999 89999999999984 44568899999885422110 112233
Q ss_pred ccc--------ccchh-------hHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHH
Q 001017 889 IAI--------AQFRF-------LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLY 953 (1189)
Q Consensus 889 ~~i--------~~f~~-------l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~ 953 (1189)
..| .+|++ +.+| ++.+|....-+++.++|.++..+.++.++|+..++. ..++|+.-.++|.
T Consensus 1049 lQiSgqLnaL~c~~~f~~ee~ikiirL-Ie~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~---LP~i~s~sdii~l 1124 (1354)
T KOG4383|consen 1049 LQISGQLNALACDFRFDHEELIKIIRL-IECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFF---LPIIFSHSDIILL 1124 (1354)
T ss_pred eeecccccccccccchhHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---ccchhccchHHHH
Confidence 111 12443 4445 788899999999999999999999999888876654 4456777788888
Q ss_pred HHHHhhHHHHhhh-hcccCCChHH
Q 001017 954 NVFFTSLPVIALG-VFDQDVSARF 976 (1189)
Q Consensus 954 n~i~~~lp~~~l~-~~~~~~~~~~ 976 (1189)
..+- +|.+++| ++.+......
T Consensus 1125 Scfc--~PlL~i~tL~gk~~hkSi 1146 (1354)
T KOG4383|consen 1125 SCFC--IPLLFIGTLFGKFEHKSI 1146 (1354)
T ss_pred HHHH--HHHHHHHHHhcCCCccce
Confidence 7765 6888877 5555444333
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.9e-10 Score=118.27 Aligned_cols=174 Identities=14% Similarity=0.086 Sum_probs=123.7
Q ss_pred cchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhccccccccchhhhhhhhhhhHHHHHHHHHHHHHhhcc
Q 001017 943 PVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQ 1022 (1189)
Q Consensus 943 ~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1022 (1189)
.++++.|++|.|++.+.+|+++++.++ ++++.+.+.|+ .+++++++++.+...+.+|+++++++++.++.....
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e~--~~~~im~r~Pr----~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~ 75 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFEP--PDPDIMKRPPR----DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI 75 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGSS---STTGGGS-------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcCc--chhhhhhcccc----ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 358899999999999999999999854 44455555555 788899999999999999999999998887765542
Q ss_pred ccccCCCceeehhhhhhHHHHHHHHHHHHHHHH-hccc---c---hhhHHHHHHHHHHHHHHHHHHHhccCccccchhHH
Q 001017 1023 QAFRKGGEVIGLEILGTTMYTCVVWVVNCQMAL-SVTY---F---TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYK 1095 (1189)
Q Consensus 1023 ~~~~~~g~~~~~~~~~~~~f~~~v~~~n~~~~l-~~~~---~---t~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~ 1095 (1189)
......+...+.....|++|+++++.+.+.... ++.. | ....+..++.++++.+++++++.++|.. +.
T Consensus 76 ~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~-~~---- 150 (182)
T PF00689_consen 76 FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGL-NR---- 150 (182)
T ss_dssp TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTH-HH----
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhh-Hh----
Confidence 111111111124457899999998888777553 2211 2 3456788999999999999999999842 33
Q ss_pred HHHHHhccChHHHHHHHHHHHHHHHHHHHHHHH
Q 001017 1096 VFIEACAPAPSFWLITLLVLMSSLLPYFTYSAI 1128 (1189)
Q Consensus 1096 ~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~~ 1128 (1189)
+++..+.++..|+.+++++++.++.+++.|++
T Consensus 151 -~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 151 -IFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp -HST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred -hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 56677788999999999999999999999874
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.2e-08 Score=114.37 Aligned_cols=63 Identities=19% Similarity=0.257 Sum_probs=52.1
Q ss_pred EEeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 830 CCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 830 ~~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
+..++|. .|+..++.+.++.| +.|+++|||.||.+||+.|++||+|++.. ..++.+||++..+
T Consensus 187 ~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~-~~vK~~A~~vt~~ 254 (270)
T PRK10513 187 FLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAI-PSVKEVAQFVTKS 254 (270)
T ss_pred eEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCcc-HHHHHhcCeeccC
Confidence 3455554 79999999987655 67999999999999999999999996544 4489999998864
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.4e-08 Score=113.86 Aligned_cols=186 Identities=16% Similarity=0.088 Sum_probs=100.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc----CCceEEE-EeCCCCcccccchhhHHHHHHHHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR----QGMRQVI-ISSETPESKTLEKSEDKSAAAAALKA 774 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~----~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~ 774 (1189)
.+.+.+.++|++|+++|+++.+.||+....+..+.+++++.. .++..+. .+++......+..+.....++.....
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588899999999999999999999999999999999998732 2222221 11111111222222222222211110
Q ss_pred hHH-------------------HHHhhhhhccccC--C--CCCCCeEEEEcCchhhhhhhHHHHHHHHHHHh-ccce---
Q 001017 775 SVL-------------------HQLIRGKELLDSS--N--ESLGPLALIIDGKSLTYALEDDVKDLFLELAI-GCAS--- 827 (1189)
Q Consensus 775 ~~~-------------------~~~~~~~~~~~~~--~--~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~-~~~~--- 827 (1189)
... ............. . .......+++-+.. + .+ +++...+.+... ....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~-~-~~-~~~~~~l~~~~~~~~~~~~s 175 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDH-D-DL-TRLQIQLNEALGERAHLCFS 175 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCH-H-HH-HHHHHHHHHHhcCCEEEEEc
Confidence 000 0000000000000 0 00011111111111 0 00 122222221110 0110
Q ss_pred -eEEEeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccc
Q 001017 828 -VICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 889 (1189)
Q Consensus 828 -vv~~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~ 889 (1189)
.-+..++|. .|+..++.+.++.| ..|+++|||.||++||+.|+.||+|++. ..+++.+||+
T Consensus 176 ~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na-~~~vK~~A~~ 242 (272)
T PRK15126 176 ATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNA-MPQLRAELPH 242 (272)
T ss_pred CCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCC-hHHHHHhCCC
Confidence 124456666 69999999987655 6899999999999999999999999654 4448999996
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=9.5e-08 Score=106.65 Aligned_cols=191 Identities=16% Similarity=0.211 Sum_probs=104.5
Q ss_pred Eeeeeccc-CCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCC-------cccccchhhH
Q 001017 693 GATAVEDK-LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETP-------ESKTLEKSED 764 (1189)
Q Consensus 693 G~~~ieD~-lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~-------~~~~~~~~~~ 764 (1189)
|.+.-.|. +.+.+.++|+++++.|+++.++||+....+..+.+++++.. ..+..+|... ....++.+..
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~i~~~~l~~~~~ 88 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNGGELLFQKPLSREDV 88 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecCCcEEeeecCCHHHH
Confidence 44444444 88999999999999999999999999999999999999843 3333333321 1122222221
Q ss_pred HHHHHHHHHH-hHHHHHhhhh-hccc------cCCC--------------CCCC-eEEEEc--CchhhhhhhHHHHHHHH
Q 001017 765 KSAAAAALKA-SVLHQLIRGK-ELLD------SSNE--------------SLGP-LALIID--GKSLTYALEDDVKDLFL 819 (1189)
Q Consensus 765 ~~~~~~~~~~-~~~~~~~~~~-~~~~------~~~~--------------~~~~-~~lvi~--G~~l~~~~~~~~~~~~~ 819 (1189)
...+...... .......... .... .... .... ..+.++ .+.+ ++....+.
T Consensus 89 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~ 163 (264)
T COG0561 89 EELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEIL-----EELVEALR 163 (264)
T ss_pred HHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhH-----HHHHHHHh
Confidence 1111111000 0000000000 0000 0000 0000 000111 0111 11111111
Q ss_pred HHHhccceeEEEe-------CCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcc
Q 001017 820 ELAIGCASVICCR-------SSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSS 887 (1189)
Q Consensus 820 ~~~~~~~~vv~~r-------~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~s 887 (1189)
+... -....+.+ +.|. +|+..++.+.++.| ..|+++||+.||.+||+.|+.||+|++. ...+++.|
T Consensus 164 ~~~~-~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A 241 (264)
T COG0561 164 KRFP-DLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELA 241 (264)
T ss_pred hhcc-ccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhC
Confidence 1110 01223333 3343 79999998888655 4699999999999999999999999766 55599999
Q ss_pred cccccc
Q 001017 888 DIAIAQ 893 (1189)
Q Consensus 888 D~~i~~ 893 (1189)
|++...
T Consensus 242 ~~vt~~ 247 (264)
T COG0561 242 DYVTTS 247 (264)
T ss_pred CcccCC
Confidence 966443
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.8e-07 Score=99.57 Aligned_cols=121 Identities=22% Similarity=0.250 Sum_probs=89.9
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
.++.|++.++++.++++|.+||++||-...-+..+|+.+|+...-...+.....
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999995433322222210
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCC---CeEEE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLA 855 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~---~~vl~ 855 (1189)
+.+|. ++.-.+..+.|...++.+.+..| +.+.+
T Consensus 130 ---------------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 ---------------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred ---------------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEE
Confidence 12222 23334555789888866665444 46999
Q ss_pred EcCCCCChhhhhhcCeeEEecCCcchhhhhcccccc
Q 001017 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAI 891 (1189)
Q Consensus 856 iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i 891 (1189)
+|||.||.|||+.|+.+|++..... ....|+..+
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~~~~--l~~~a~~~~ 199 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNPKPK--LRALADVRI 199 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCcCHH--HHHHHHHhc
Confidence 9999999999999999999976654 233444443
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.5e-08 Score=109.40 Aligned_cols=62 Identities=24% Similarity=0.259 Sum_probs=50.1
Q ss_pred EEeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccc--cccc
Q 001017 830 CCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD--IAIA 892 (1189)
Q Consensus 830 ~~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD--~~i~ 892 (1189)
+..+.|. .|+..++.+.++.| +.|+++|||.||++||+.|+.||||++.. ..++..|| ++..
T Consensus 181 ~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~-~~vK~~A~~~~v~~ 249 (266)
T PRK10976 181 CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAH-QRLKDLLPELEVIG 249 (266)
T ss_pred eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCc-HHHHHhCCCCeecc
Confidence 4456665 69999999987655 67999999999999999999999996554 44888887 5554
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.3e-07 Score=100.19 Aligned_cols=126 Identities=19% Similarity=0.147 Sum_probs=90.3
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.||+.++|+.|++.| ++.++||-....+..+++.+|+..--...+.+....
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57999999999999975 999999999999999999999842111111111000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
.++|. .. ..+..|..+++.+++ .+..++++|||
T Consensus 121 --------------------~~tG~------------------------~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs 153 (203)
T TIGR02137 121 --------------------RVVGY------------------------QL--RQKDPKRQSVIAFKS-LYYRVIAAGDS 153 (203)
T ss_pred --------------------eeECe------------------------ee--cCcchHHHHHHHHHh-hCCCEEEEeCC
Confidence 11111 11 346789999999976 67789999999
Q ss_pred CCChhhhhhcCeeEEecCCcchhhhhcccccccc-chhhHHH
Q 001017 860 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ-FRFLERL 900 (1189)
Q Consensus 860 ~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~-f~~l~~l 900 (1189)
.||.+|++.|++||++..++.. ...+=|+.... +.-|..+
T Consensus 154 ~nDl~ml~~Ag~~ia~~ak~~~-~~~~~~~~~~~~~~~~~~~ 194 (203)
T TIGR02137 154 YNDTTMLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKRE 194 (203)
T ss_pred HHHHHHHHhCCCCEEecCCHHH-HHhCCCCCcccCHHHHHHH
Confidence 9999999999999999887764 34444555443 4444444
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.2e-08 Score=117.73 Aligned_cols=62 Identities=27% Similarity=0.382 Sum_probs=51.3
Q ss_pred EeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 831 CRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 831 ~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
..+.|. .|+..++.+.++.| +.|++||||.||++||+.|+.||||++.. ..++.+||++..+
T Consensus 499 lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~-eeVK~~Ad~VT~s 565 (580)
T PLN02887 499 LEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGA-EKTKAVADVIGVS 565 (580)
T ss_pred EEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCC-HHHHHhCCEEeCC
Confidence 445554 79999999988655 68999999999999999999999996554 4489999998754
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.3e-07 Score=103.29 Aligned_cols=185 Identities=16% Similarity=0.183 Sum_probs=101.0
Q ss_pred ccc-CCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCc----ccccchhhHHHHHHHHH
Q 001017 698 EDK-LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE----SKTLEKSEDKSAAAAAL 772 (1189)
Q Consensus 698 eD~-lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~~ 772 (1189)
.|+ +.+.+.++|++|++.|++++++||+....+..+++.+|+-. ..+..++.... ...+..... ....+.
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~-~~~~~~- 91 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFLGDI-EECEKA- 91 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEEcch-HHHHHH-
Confidence 444 77899999999999999999999999999999999988631 23333332110 000000000 001110
Q ss_pred HHhHHHHHhhhhhccccCCCCCCCeEEE-EcCchhhhhhhHHHHHHHHHHHhc---cceeEEEeCCcc--cHHHHHHHHH
Q 001017 773 KASVLHQLIRGKELLDSSNESLGPLALI-IDGKSLTYALEDDVKDLFLELAIG---CASVICCRSSPK--QKALVTRLVK 846 (1189)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv-i~G~~l~~~~~~~~~~~~~~~~~~---~~~vv~~r~sP~--qK~~iV~~l~ 846 (1189)
.+............+...........+. .+.... ++..+.+.+.... .....+....|. .|+..++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~ 166 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLA 166 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHH
Confidence 0111111100000010000000011111 111111 1222222221100 011123455665 4999999888
Q ss_pred hcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 847 TKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 847 ~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
++.| ..++++|||.||.+|++.|++|++|.+.. ..++..||++..+
T Consensus 167 ~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~-~~vk~~a~~v~~~ 215 (230)
T PRK01158 167 ELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANAD-EELKEAADYVTEK 215 (230)
T ss_pred HHhCCCHHHEEEECCchhhHHHHHhcCceEEecCcc-HHHHHhcceEecC
Confidence 7544 57999999999999999999999996554 4488999998764
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.4e-07 Score=102.66 Aligned_cols=176 Identities=18% Similarity=0.194 Sum_probs=97.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcc---------cccchhhHHHHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES---------KTLEKSEDKSAAAA 770 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~ 770 (1189)
.+.+.+.++|++|+++||+++++||+....+..+.+.+|+.. ..+..++..... ..+...........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 477888999999999999999999999999999999998421 233333321100 00111000000000
Q ss_pred HHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccc---eeEEEeCCcc--cHHHHHHHH
Q 001017 771 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA---SVICCRSSPK--QKALVTRLV 845 (1189)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~---~vv~~r~sP~--qK~~iV~~l 845 (1189)
. ...................+......+ .......++..... ...+..+.|. .|+..++.+
T Consensus 92 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l 157 (225)
T TIGR01482 92 K---------TFPFSRLKVQYPRRASLVKMRYGIDVD-----TVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKL 157 (225)
T ss_pred c---------ccchhhhccccccccceEEEeecCCHH-----HHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHH
Confidence 0 000000000000011111111111111 11111111111111 1124455553 799999988
Q ss_pred HhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 846 KTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 846 ~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.++.| ..|++|||+.||++|++.|++|++|.+.. ..++..||++..+
T Consensus 158 ~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~-~~~k~~A~~vt~~ 207 (225)
T TIGR01482 158 KEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQ-PELKEWADYVTES 207 (225)
T ss_pred HHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChh-HHHHHhcCeecCC
Confidence 77544 67999999999999999999999996544 3488999998754
|
catalyze the same reaction as SPP. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.8e-07 Score=105.73 Aligned_cols=128 Identities=23% Similarity=0.228 Sum_probs=91.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.||+.++|+.|++.|+++.++||.....+..+..++|+...-.+.+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 48899999999999999999999999988888898888884211111111000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEE-eCCcccHHHHHHHHHhcCC---CeEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC-RSSPKQKALVTRLVKTKTS---STTLA 855 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~-r~sP~qK~~iV~~l~~~~~---~~vl~ 855 (1189)
.++|. +.. -+..+.|...++.+.+..| +.|+|
T Consensus 234 --------------------~ltg~------------------------v~g~iv~~k~K~~~L~~la~~lgi~~~qtIa 269 (322)
T PRK11133 234 --------------------KLTGN------------------------VLGDIVDAQYKADTLTRLAQEYEIPLAQTVA 269 (322)
T ss_pred --------------------EEEeE------------------------ecCccCCcccHHHHHHHHHHHcCCChhhEEE
Confidence 11111 110 1234678988888876544 68999
Q ss_pred EcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchhhHHHH
Q 001017 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 856 iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
||||.||.+|++.|++||++..... .++.||.++. +..|..+|
T Consensus 270 VGDg~NDl~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~-~~~l~~~l 312 (322)
T PRK11133 270 IGDGANDLPMIKAAGLGIAYHAKPK--VNEQAQVTIR-HADLMGVL 312 (322)
T ss_pred EECCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEec-CcCHHHHH
Confidence 9999999999999999999944433 7889999996 44444444
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.56 E-value=5.9e-08 Score=107.37 Aligned_cols=191 Identities=16% Similarity=0.175 Sum_probs=104.1
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCC--------cccccchhhHHHHHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETP--------ESKTLEKSEDKSAAAA 770 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~--------~~~~~~~~~~~~~~~~ 770 (1189)
.++.+.+.++|++|+++|+++.+.||+....+..+..++++- ...+..+|... ....++.+.....+..
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~---~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~ 90 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID---DYFICSNGALIDDPKGKILYEKPIDSDDVKKILKY 90 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC---SEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch---hhhcccccceeeecccccchhhheeccchhheeeh
Confidence 346789999999999999999999999999999999998874 22332222221 1112222222222222
Q ss_pred HHHHhHHHHHhhhhhccccCC-------------------------CCCCCeEEEEcCc-hhhhhhhHHHHHHHHHHH-h
Q 001017 771 ALKASVLHQLIRGKELLDSSN-------------------------ESLGPLALIIDGK-SLTYALEDDVKDLFLELA-I 823 (1189)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~lvi~G~-~l~~~~~~~~~~~~~~~~-~ 823 (1189)
.....+...+......+.... .......+.+.++ .-...+.+++.+.+.... .
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~ 170 (254)
T PF08282_consen 91 LKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDV 170 (254)
T ss_dssp HHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeE
Confidence 211110000000000000000 0001111111111 111111223333332110 0
Q ss_pred ccceeEEEeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 824 GCASVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 824 ~~~~vv~~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.....-+..++|. .|+..++.+.++.| +.++++||+.||.+||+.|+.||+|.++.. ..+..||++...
T Consensus 171 ~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~-~~k~~a~~i~~~ 244 (254)
T PF08282_consen 171 VRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATP-ELKKAADYITPS 244 (254)
T ss_dssp EEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-H-HHHHHSSEEESS
T ss_pred EEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCH-HHHHhCCEEecC
Confidence 0011123345554 79999999987543 789999999999999999999999976554 388999998775
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.53 E-value=5.8e-07 Score=96.93 Aligned_cols=176 Identities=18% Similarity=0.210 Sum_probs=99.1
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCc----ccccchhhHHHHHHHHHHHh
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE----SKTLEKSEDKSAAAAALKAS 775 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~ 775 (1189)
++.+++.++|++|+++|+++.++||+....+..+++.+++.. ..+..++.... ......... ..+.......
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~~~~~~~~-~~~~~~~~~~ 93 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDIFLANMEE-EWFLDEEKKK 93 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcEEEecccc-hhhHHHhhhh
Confidence 488899999999999999999999999999999999988632 22222222110 011111100 0110000000
Q ss_pred HHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhcccee---EEEeCCc--ccHHHHHHHHHhcCC
Q 001017 776 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV---ICCRSSP--KQKALVTRLVKTKTS 850 (1189)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~v---v~~r~sP--~qK~~iV~~l~~~~~ 850 (1189)
.... ...... .......+..++.... .+.+.+... ..... .+..++| ..|+..++.+.+..+
T Consensus 94 ---~~~~--~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~l~~~--~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~ 160 (215)
T TIGR01487 94 ---RFPR--DRLSNE-YPRASLVIMREGKDVD-----EVREIIKER--GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLG 160 (215)
T ss_pred ---hhhh--hhcccc-cceeEEEEecCCccHH-----HHHHHHHhC--CeEEEecCceEEEecCCCChHHHHHHHHHHhC
Confidence 0000 000000 0011112222332221 122222111 11111 2334444 489999998877544
Q ss_pred ---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 851 ---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 851 ---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
..+++|||+.||.+|++.|++|++|.+. ..++++.||++...
T Consensus 161 i~~~~~i~iGDs~ND~~ml~~ag~~vam~na-~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 161 IKPEEVAAIGDSENDIDLFRVVGFKVAVANA-DDQLKEIADYVTSN 205 (215)
T ss_pred CCHHHEEEECCCHHHHHHHHhCCCeEEcCCc-cHHHHHhCCEEcCC
Confidence 4699999999999999999999999654 44589999998753
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=7.7e-07 Score=99.89 Aligned_cols=56 Identities=23% Similarity=0.342 Sum_probs=46.6
Q ss_pred cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 837 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 837 qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.|+..++.+.++.| +.|++|||+.||++|++.|++||+|++. ....+..||++..+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna-~~~lk~~Ad~v~~~ 257 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNA-DDAVKARADLVIGD 257 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCc-hHHHHHhCCEEEec
Confidence 69988887766544 6799999999999999999999999654 44578899998864
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.2e-06 Score=98.09 Aligned_cols=186 Identities=12% Similarity=0.114 Sum_probs=99.2
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCc--------------ccccchhhHHH
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE--------------SKTLEKSEDKS 766 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~--------------~~~~~~~~~~~ 766 (1189)
+-+.+.++|++|+++||++++.||+....+..+++++|+.. ...+..||.... ...++.+....
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~--~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~ 102 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQG--LPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQ 102 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCC--CcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHH
Confidence 44678899999999999999999999999999999998721 123333333211 11123333333
Q ss_pred HHHHHHHH-hHH---------HHHhhh---h-hccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhcccee---E
Q 001017 767 AAAAALKA-SVL---------HQLIRG---K-ELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV---I 829 (1189)
Q Consensus 767 ~~~~~~~~-~~~---------~~~~~~---~-~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~v---v 829 (1189)
.++..... ... ...... . ..............+.+.+..- .+ .++.+.+... .+..+ -
T Consensus 103 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~l~~~--~~~~~~~~~ 177 (271)
T PRK03669 103 VLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDE--RM-AQFTARLAEL--GLQFVQGAR 177 (271)
T ss_pred HHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHH--HH-HHHHHHHHHC--CCEEEecCe
Confidence 33322111 100 000000 0 0000000000111122222110 00 1223333221 12111 2
Q ss_pred EEeCCcc--cHHHHHHHHHhcCC------CeEEEEcCCCCChhhhhhcCeeEEecCCcc--hhh---hhcccccccc
Q 001017 830 CCRSSPK--QKALVTRLVKTKTS------STTLAIGDGANDVGMLQEADIGVGISGVEG--MQA---VMSSDIAIAQ 893 (1189)
Q Consensus 830 ~~r~sP~--qK~~iV~~l~~~~~------~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~--~~a---~~~sD~~i~~ 893 (1189)
+..++|. .|+..++.+.++.| ..|+++|||.||++||+.|++||+|.+... .++ +..+|++...
T Consensus 178 ~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~ 254 (271)
T PRK03669 178 FWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQR 254 (271)
T ss_pred eEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccC
Confidence 4466664 79999998877533 579999999999999999999999974331 112 2357776554
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.41 E-value=9.6e-07 Score=95.62 Aligned_cols=124 Identities=22% Similarity=0.284 Sum_probs=87.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+|++++++.|++.|+++.++||.....+..+.+.+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58999999999999999999999999999999999999984311111111100
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEe-CCcccHHHHHHHHHhcCC---CeEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKTS---STTLA 855 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r-~sP~qK~~iV~~l~~~~~---~~vl~ 855 (1189)
.++|. +.++ ..+..|..+++.+.+..+ +.+++
T Consensus 138 --------------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~ 173 (219)
T TIGR00338 138 --------------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVA 173 (219)
T ss_pred --------------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEE
Confidence 00000 1111 123346666765544333 57999
Q ss_pred EcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh
Q 001017 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 896 (1189)
Q Consensus 856 iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~ 896 (1189)
|||+.+|++|.+.|++++++.+.+. +.++||++|.+.++
T Consensus 174 iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~~ 212 (219)
T TIGR00338 174 VGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKDL 212 (219)
T ss_pred EECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCCH
Confidence 9999999999999999999976654 67899999987553
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.4e-06 Score=93.60 Aligned_cols=186 Identities=12% Similarity=0.094 Sum_probs=97.1
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc----cCCceEEEEeCCCC-------cccccchhhHHHHHH
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETP-------ESKTLEKSEDKSAAA 769 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~ 769 (1189)
.-+.+.++|+.|+++|+++.++||+....+..+.+++|+. ..++..+....... ....++.+.....++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 4456899999999999999999999999999999999863 33333333222111 112233333333332
Q ss_pred HHHHH-hHHHHHhh-----------hh--hccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhcc-ceeEEEeCC
Q 001017 770 AALKA-SVLHQLIR-----------GK--ELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGC-ASVICCRSS 834 (1189)
Q Consensus 770 ~~~~~-~~~~~~~~-----------~~--~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~-~~vv~~r~s 834 (1189)
..... ........ +. ..............++. +.... ..+.+.+......+ .+..+..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~s~~~~ei~ 171 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW-SEERR----ERFTEALVELGLEVTHGNRFYHVL 171 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-ChHHH----HHHHHHHHHcCCEEEeCCceEEEe
Confidence 21111 00000000 00 00000000011111122 11111 12222222110000 001233444
Q ss_pred cc--cHHHHHHHHHhcC-----CCeEEEEcCCCCChhhhhhcCeeEEecCCcc--hhhhhc--c-cccc
Q 001017 835 PK--QKALVTRLVKTKT-----SSTTLAIGDGANDVGMLQEADIGVGISGVEG--MQAVMS--S-DIAI 891 (1189)
Q Consensus 835 P~--qK~~iV~~l~~~~-----~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~--~~a~~~--s-D~~i 891 (1189)
|. .|+..++.+.++. ...|+++||+.||.+|++.|++||+|.+... ...+.. | +++.
T Consensus 172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt 240 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLT 240 (256)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEc
Confidence 43 7998888887653 4679999999999999999999999977642 235654 3 4654
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.38 E-value=8.2e-07 Score=98.63 Aligned_cols=63 Identities=22% Similarity=0.326 Sum_probs=51.0
Q ss_pred EEeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 830 CCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 830 ~~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
+..+.|. .|+..++.+.+..+ ..++++||+.||++|++.|+.|++|.+. ...++..||++...
T Consensus 179 ~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na-~~~~k~~a~~~~~~ 246 (256)
T TIGR00099 179 SIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNA-DEELKALADYVTDS 246 (256)
T ss_pred eEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCc-hHHHHHhCCEEecC
Confidence 3455655 69999999987544 6899999999999999999999999654 34478899998764
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.25 E-value=4.7e-06 Score=84.46 Aligned_cols=96 Identities=15% Similarity=0.174 Sum_probs=73.1
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhcc
Q 001017 708 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 787 (1189)
Q Consensus 708 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1189)
+|+.|++.|+++.++||+....+..+.+..|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------------------------- 69 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------------------------- 69 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999999732
Q ss_pred ccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEEEcCCCCChh
Q 001017 788 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDVG 864 (1189)
Q Consensus 788 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~iGDG~ND~~ 864 (1189)
.+.. ...|...++.+.+. ..+.++++||+.||++
T Consensus 70 -----------------------------------------~~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 70 -----------------------------------------LYQG--QSNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred -----------------------------------------EEec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 0000 02344444444332 2367999999999999
Q ss_pred hhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 865 MLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 865 ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
|++.|++++++..... ..+..||+++..
T Consensus 107 ~~~~ag~~~~v~~~~~-~~~~~a~~i~~~ 134 (154)
T TIGR01670 107 VMEKVGLSVAVADAHP-LLIPRADYVTRI 134 (154)
T ss_pred HHHHCCCeEecCCcCH-HHHHhCCEEecC
Confidence 9999999999976543 367778988853
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.9e-06 Score=85.66 Aligned_cols=96 Identities=13% Similarity=0.132 Sum_probs=73.2
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhc
Q 001017 707 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 786 (1189)
Q Consensus 707 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1189)
..|+.|+++|+++.++|+.....+..+...+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 57999999999999999999999999999999842
Q ss_pred cccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEEEcCCCCCh
Q 001017 787 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDV 863 (1189)
Q Consensus 787 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~iGDG~ND~ 863 (1189)
.|....| |...++.+.+. ....+++|||+.||+
T Consensus 76 ------------------------------------------~f~~~kp--kp~~~~~~~~~l~~~~~ev~~iGD~~nDi 111 (169)
T TIGR02726 76 ------------------------------------------FHEGIKK--KTEPYAQMLEEMNISDAEVCYVGDDLVDL 111 (169)
T ss_pred ------------------------------------------EEecCCC--CHHHHHHHHHHcCcCHHHEEEECCCHHHH
Confidence 1111112 22233333222 236799999999999
Q ss_pred hhhhhcCeeEEecCCcchhhhhccccccc
Q 001017 864 GMLQEADIGVGISGVEGMQAVMSSDIAIA 892 (1189)
Q Consensus 864 ~ml~~A~vGI~i~g~~~~~a~~~sD~~i~ 892 (1189)
+|++.|+++++|.+... .++..|+++..
T Consensus 112 ~~~~~ag~~~am~nA~~-~lk~~A~~I~~ 139 (169)
T TIGR02726 112 SMMKRVGLAVAVGDAVA-DVKEAAAYVTT 139 (169)
T ss_pred HHHHHCCCeEECcCchH-HHHHhCCEEcC
Confidence 99999999999976554 48889999875
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.18 E-value=4.2e-06 Score=83.07 Aligned_cols=127 Identities=17% Similarity=0.292 Sum_probs=84.7
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCce--EEEEeCCCCcccccchhhHHHHHHHHHHHhHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMR--QVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1189)
.+-||+++.++.|++.|.++.++||--..-+..+|.++||...+.. .+.++....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk----------------------- 144 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK----------------------- 144 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc-----------------------
Confidence 3679999999999999999999999999999999999999542211 111111000
Q ss_pred HHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc-CCCeEEEE
Q 001017 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK-TSSTTLAI 856 (1189)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~-~~~~vl~i 856 (1189)
...++... .-+...-|++++..+++. .-+.++||
T Consensus 145 ----------------------~~gfd~~~-----------------------ptsdsggKa~~i~~lrk~~~~~~~~mv 179 (227)
T KOG1615|consen 145 ----------------------YLGFDTNE-----------------------PTSDSGGKAEVIALLRKNYNYKTIVMV 179 (227)
T ss_pred ----------------------ccccccCC-----------------------ccccCCccHHHHHHHHhCCChheeEEe
Confidence 00000000 011234699999999874 34789999
Q ss_pred cCCCCChhhhhhcCeeEEecCCcchh-hhhccccccccc
Q 001017 857 GDGANDVGMLQEADIGVGISGVEGMQ-AVMSSDIAIAQF 894 (1189)
Q Consensus 857 GDG~ND~~ml~~A~vGI~i~g~~~~~-a~~~sD~~i~~f 894 (1189)
|||+||.+|+..|+.=+|..|+...+ .+..++.-+.+|
T Consensus 180 GDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f 218 (227)
T KOG1615|consen 180 GDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVTDF 218 (227)
T ss_pred cCCccccccCCchhhhhccCCceEcHhhHhccHHHHHHH
Confidence 99999999999988777776654321 233444444333
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.17 E-value=6.7e-06 Score=88.89 Aligned_cols=42 Identities=7% Similarity=0.060 Sum_probs=38.1
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
.+..-+++.++|++|+++|++++++||+....+..+..++|+
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~ 54 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGV 54 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 455666799999999999999999999999999999999996
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.5e-05 Score=87.97 Aligned_cols=180 Identities=13% Similarity=0.109 Sum_probs=95.6
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCccc--ccchhhHHHHHHHHHH-H
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESK--TLEKSEDKSAAAAALK-A 774 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~-~ 774 (1189)
..+..+...++++++++.|++++++||+....+..+.++.++..++ ..+.-+|...... ..........+..... +
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 3457788999999999999999999999999999999988875543 1222222211100 0011111111111100 1
Q ss_pred hHHHHHhhhhhccccCC-CCC--CCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEE----eCCc--ccHHHHHHHH
Q 001017 775 SVLHQLIRGKELLDSSN-ESL--GPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC----RSSP--KQKALVTRLV 845 (1189)
Q Consensus 775 ~~~~~~~~~~~~~~~~~-~~~--~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~----r~sP--~qK~~iV~~l 845 (1189)
.+.. +......+.... ... ....+..+.+..... ..++.+.+......+..+... .+.| ..|...++.+
T Consensus 98 ~~~~-~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l 175 (249)
T TIGR01485 98 IVVA-ITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEV-IKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYL 175 (249)
T ss_pred HHHH-HHhcCcccccCCccccCCeeEEEEechhhhhHH-HHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHH
Confidence 1111 111111111110 011 122222222221111 112333333322222222222 4555 3799999998
Q ss_pred HhcCC---CeEEEEcCCCCChhhhhh-cCeeEEecCCcc
Q 001017 846 KTKTS---STTLAIGDGANDVGMLQE-ADIGVGISGVEG 880 (1189)
Q Consensus 846 ~~~~~---~~vl~iGDG~ND~~ml~~-A~vGI~i~g~~~ 880 (1189)
.+..| ..|+++||+.||++|++. ++.||+|.+...
T Consensus 176 ~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~ 214 (249)
T TIGR01485 176 LQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQE 214 (249)
T ss_pred HHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHH
Confidence 77543 689999999999999998 679999966543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.6e-05 Score=85.08 Aligned_cols=125 Identities=19% Similarity=0.182 Sum_probs=87.3
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.||++++++.|+++ +++.++||.....+..+..++|+...-...+....+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 3679999999999999 9999999999999999999999842111111111000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEe-CCcccHHHHHHHHHhcCCCeEEEEcC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKTSSTTLAIGD 858 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r-~sP~qK~~iV~~l~~~~~~~vl~iGD 858 (1189)
.+ +... ..|..|...++.++. .+..++||||
T Consensus 121 --------------------~i---------------------------~~~~~~~p~~k~~~l~~~~~-~~~~~v~iGD 152 (205)
T PRK13582 121 --------------------MI---------------------------TGYDLRQPDGKRQAVKALKS-LGYRVIAAGD 152 (205)
T ss_pred --------------------eE---------------------------ECccccccchHHHHHHHHHH-hCCeEEEEeC
Confidence 00 1111 236778888888876 6788999999
Q ss_pred CCCChhhhhhcCeeEEecCCcchhhhhcccc-ccccchhhHHH
Q 001017 859 GANDVGMLQEADIGVGISGVEGMQAVMSSDI-AIAQFRFLERL 900 (1189)
Q Consensus 859 G~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~-~i~~f~~l~~l 900 (1189)
|.||++|.++|++|+.....+.. ....++. ++.+++-+..+
T Consensus 153 s~~D~~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 153 SYNDTTMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred CHHHHHHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 99999999999999987554432 2234554 66666655444
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.3e-05 Score=87.73 Aligned_cols=177 Identities=15% Similarity=0.160 Sum_probs=91.5
Q ss_pred HHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcc-cccc-hhhHHHHHHHH-HHHhHHHHHhh
Q 001017 706 PECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES-KTLE-KSEDKSAAAAA-LKASVLHQLIR 782 (1189)
Q Consensus 706 ~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~-~~~~-~~~~~~~~~~~-~~~~~~~~~~~ 782 (1189)
.++++ ++++||++.++||+....+..+...+++...+ ..+..++..... .... .......+... ....+.....
T Consensus 21 ~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~-~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 97 (236)
T TIGR02471 21 VELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPD-VLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALA- 97 (236)
T ss_pred HHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCC-EEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHh-
Confidence 35665 69999999999999999999999999874221 223333332100 0000 00000011000 0001111111
Q ss_pred hhhccccCCCC-CCCeEEEE--cCchhhhhhhHHHHHHHHHHHhccceeEEE----eCCcc--cHHHHHHHHHhcCC---
Q 001017 783 GKELLDSSNES-LGPLALII--DGKSLTYALEDDVKDLFLELAIGCASVICC----RSSPK--QKALVTRLVKTKTS--- 850 (1189)
Q Consensus 783 ~~~~~~~~~~~-~~~~~lvi--~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~----r~sP~--qK~~iV~~l~~~~~--- 850 (1189)
....+..+... .....+.+ +.+... . ..++.+.+......++.+... .+.|. .|...++.+.++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~-~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~ 175 (236)
T TIGR02471 98 DIPGLTLQDDQEQGPFKISYLLDPEGEP-I-LPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPL 175 (236)
T ss_pred cCCCcEeCChhcCCCeeEEEEECcccch-H-HHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCH
Confidence 00011111111 12223333 322111 0 112223333222112222222 45554 79999999987544
Q ss_pred CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccc
Q 001017 851 STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 888 (1189)
Q Consensus 851 ~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD 888 (1189)
..++++||+.||.+|++.|+.||+|.+... ..+..||
T Consensus 176 ~~~i~~GD~~nD~~ml~~~~~~iav~na~~-~~k~~a~ 212 (236)
T TIGR02471 176 EQILVAGDSGNDEEMLRGLTLGVVVGNHDP-ELEGLRH 212 (236)
T ss_pred HHEEEEcCCccHHHHHcCCCcEEEEcCCcH-HHHHhhc
Confidence 479999999999999999999999966544 3788888
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.6e-05 Score=87.39 Aligned_cols=42 Identities=12% Similarity=0.033 Sum_probs=38.2
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
+.+-+++.++|+.|++.|++++++||+....+..+.+++|+.
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 356678999999999999999999999999999999999974
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.3e-05 Score=83.75 Aligned_cols=112 Identities=18% Similarity=0.191 Sum_probs=80.1
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhc
Q 001017 707 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 786 (1189)
Q Consensus 707 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1189)
..|+.|++.|+++.++||.....+..+++++|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 68999999999999999999999999999999732
Q ss_pred cccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCC---CeEEEEcCCCCCh
Q 001017 787 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIGDGANDV 863 (1189)
Q Consensus 787 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~---~~vl~iGDG~ND~ 863 (1189)
+|. ....|...++.+.+..| ..|++|||+.||+
T Consensus 90 ------------------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 90 ------------------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred ------------------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 110 11234444444433233 6899999999999
Q ss_pred hhhhhcCeeEEecCCcchhhhhccccccc------cchhhHHHH-HHhhhhh
Q 001017 864 GMLQEADIGVGISGVEGMQAVMSSDIAIA------QFRFLERLL-LVHGHWC 908 (1189)
Q Consensus 864 ~ml~~A~vGI~i~g~~~~~a~~~sD~~i~------~f~~l~~ll-l~~GR~~ 908 (1189)
+|++.|++++++...+ ..++..||+++. ..+-+..++ ...|+|-
T Consensus 126 ~~a~~aG~~~~v~~~~-~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~~ 176 (183)
T PRK09484 126 PVMEKVGLSVAVADAH-PLLLPRADYVTRIAGGRGAVREVCDLLLLAQGKLD 176 (183)
T ss_pred HHHHHCCCeEecCChh-HHHHHhCCEEecCCCCCCHHHHHHHHHHHhcCChh
Confidence 9999999999885433 336778899885 245555553 2445553
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.05 E-value=2e-05 Score=83.94 Aligned_cols=118 Identities=19% Similarity=0.237 Sum_probs=80.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++++|+.++++.|++.|+++.++||-....+..+++.+|+...-...+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999999632110111111000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcC---CCeEEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAI 856 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~---~~~vl~i 856 (1189)
...+ . .+....|..|..+++.+.+.. ...+++|
T Consensus 134 --------------------~~~p----------------------~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~i 169 (201)
T TIGR01491 134 --------------------FIQP----------------------D--GIVRVTFDNKGEAVERLKRELNPSLTETVAV 169 (201)
T ss_pred --------------------eEec----------------------c--eeeEEccccHHHHHHHHHHHhCCCHHHEEEE
Confidence 0000 0 122234667877777665432 3579999
Q ss_pred cCCCCChhhhhhcCeeEEecCCcchhhhhccc
Q 001017 857 GDGANDVGMLQEADIGVGISGVEGMQAVMSSD 888 (1189)
Q Consensus 857 GDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD 888 (1189)
||+.||++|++.|++++++.+... ....++|
T Consensus 170 GDs~~D~~~a~~ag~~~a~~~~~~-~~~~a~~ 200 (201)
T TIGR01491 170 GDSKNDLPMFEVADISISLGDEGH-ADYLAKD 200 (201)
T ss_pred cCCHhHHHHHHhcCCeEEECCCcc-chhhccc
Confidence 999999999999999999954332 2445554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.7e-05 Score=83.74 Aligned_cols=39 Identities=23% Similarity=0.232 Sum_probs=36.0
Q ss_pred CCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 703 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 703 ~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
+++++.|+.++++|++++++||+....+..+++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 666699999999999999999999999999999999854
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.99 E-value=4.6e-05 Score=82.61 Aligned_cols=37 Identities=19% Similarity=0.202 Sum_probs=34.6
Q ss_pred CcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 704 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 704 ~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
.+.++|+.|+++||++.++||+....+..+.+.+++.
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3789999999999999999999999999999999973
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.0017 Score=77.71 Aligned_cols=41 Identities=20% Similarity=0.169 Sum_probs=38.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++++++.+.+++++++|++++++|+-....+..+++..|+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF 112 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF 112 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999999999973
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=8.3e-05 Score=89.86 Aligned_cols=39 Identities=8% Similarity=-0.008 Sum_probs=35.3
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
.-+.+.++|+.|+++||+++++||+....+..+++++|+
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 335678999999999999999999999999999999985
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.93 E-value=8.8e-05 Score=80.81 Aligned_cols=41 Identities=10% Similarity=0.011 Sum_probs=37.5
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
+..-+.+.++|++|+++||.+++.||........+.+++++
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl 57 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRL 57 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 34667789999999999999999999999999999999997
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0001 Score=86.76 Aligned_cols=179 Identities=12% Similarity=0.095 Sum_probs=92.8
Q ss_pred cHHHH-HHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcc-cccc-hhhHHHHHHHHHHHhHHHHHh
Q 001017 705 VPECI-DKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES-KTLE-KSEDKSAAAAALKASVLHQLI 781 (1189)
Q Consensus 705 v~~~I-~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~ 781 (1189)
..+++ +++++.|+..++.||+....+..+.++.++..++.- +.-+|..... ..+. +..-...+............-
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~-I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDIT-IMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEE-EEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 33444 888999999999999999999999999998766422 2112221110 0111 111111111111111000100
Q ss_pred hhhhccc-cCCCCCC--CeEEEEcCchhhhhhhHHHHHHHHHHHhcccee----EEEeCCcc--cHHHHHHHHHhcC---
Q 001017 782 RGKELLD-SSNESLG--PLALIIDGKSLTYALEDDVKDLFLELAIGCASV----ICCRSSPK--QKALVTRLVKTKT--- 849 (1189)
Q Consensus 782 ~~~~~~~-~~~~~~~--~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~v----v~~r~sP~--qK~~iV~~l~~~~--- 849 (1189)
.....+. +...... ...+..+.+.... ..+++.+.+......++.+ -+..+.|. .|+..++.|.++.
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~-~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~ 190 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQE-VIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAE 190 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHH-HHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhc
Confidence 1110111 0100111 2223333222221 1123333332211112111 24456665 5999999998754
Q ss_pred C---CeEEEEcCCCCChhhhhhcC-eeEEecCCcchhhhhc
Q 001017 850 S---STTLAIGDGANDVGMLQEAD-IGVGISGVEGMQAVMS 886 (1189)
Q Consensus 850 ~---~~vl~iGDG~ND~~ml~~A~-vGI~i~g~~~~~a~~~ 886 (1189)
| ..|+++||+.||.+||+.|+ .||+|++.... .++.
T Consensus 191 gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~~ 230 (413)
T PLN02382 191 GKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQW 230 (413)
T ss_pred CCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHHH
Confidence 3 58999999999999999999 69999665443 5543
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=6.1e-05 Score=82.94 Aligned_cols=50 Identities=24% Similarity=0.370 Sum_probs=40.1
Q ss_pred EEeCCcc--cHHHHHHHHHhcCCCeEEEEcC----CCCChhhhhhc-CeeEEecCCcc
Q 001017 830 CCRSSPK--QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEA-DIGVGISGVEG 880 (1189)
Q Consensus 830 ~~r~sP~--qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~A-~vGI~i~g~~~ 880 (1189)
+..+.|. +|+..++.|.++ .+.|+++|| |.||.+||+.| -.|+++++.+.
T Consensus 179 ~leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~ 235 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPED 235 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHH
Confidence 3355553 799999999884 689999999 99999999976 57787766554
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.85 E-value=9e-05 Score=79.18 Aligned_cols=172 Identities=16% Similarity=0.185 Sum_probs=89.1
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcC--cccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACS--LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~g--i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1189)
++.+.+.++|++|++.|+++.++||+....+..+..+++ ++..++..+...+...... ..+.....+... +.+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~--~~~~~~~~~~~~--~~~~ 92 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIE--PSDVFEEILGIK--EEIG 92 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEc--ccccHHHHHHhh--hhcC
Confidence 467889999999999999999999999999999988743 4445544443322211000 011111111100 1111
Q ss_pred HHHhhhhhccccC--CCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhc-ccee------EEEeCCc--ccHHHHHHHHH
Q 001017 778 HQLIRGKELLDSS--NESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASV------ICCRSSP--KQKALVTRLVK 846 (1189)
Q Consensus 778 ~~~~~~~~~~~~~--~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~-~~~v------v~~r~sP--~qK~~iV~~l~ 846 (1189)
..+.......... ........+...+..........+.+.+...... .... -+..+.| ..|...++.+.
T Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~ 172 (204)
T TIGR01484 93 AELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALL 172 (204)
T ss_pred ceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHH
Confidence 0000000000000 0011122222222201111111222222222110 0111 1224455 47999999887
Q ss_pred hcCC---CeEEEEcCCCCChhhhhhcCeeEEe
Q 001017 847 TKTS---STTLAIGDGANDVGMLQEADIGVGI 875 (1189)
Q Consensus 847 ~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i 875 (1189)
+..+ ..++++||+.||.+|++.|++||+|
T Consensus 173 ~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 173 KELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 6544 5799999999999999999999987
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.84 E-value=8.3e-05 Score=80.75 Aligned_cols=41 Identities=20% Similarity=0.428 Sum_probs=38.7
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.||+.++++.|++.|+++.++||.....+..+...+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999984
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.83 E-value=9.4e-05 Score=79.63 Aligned_cols=139 Identities=14% Similarity=0.180 Sum_probs=84.6
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-+++||+.+.++.|++.|+++.++||.....+..+....+... .++. +.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~-n~--------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYC-NE--------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEe-ce---------------------------
Confidence 4799999999999999999999999999988888888764321 1100 00
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcC
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGD 858 (1189)
+.++|..+.... ++ .|. .-+.......|..+++.++. ....++||||
T Consensus 118 --------------------~~~~~~~~~~~~-p~----------~~~-~~~~~~cg~~K~~~l~~~~~-~~~~~i~iGD 164 (214)
T TIGR03333 118 --------------------ADFSNEYIHIDW-PH----------PCD-GTCQNQCGCCKPSLIRKLSE-PNDYHIVIGD 164 (214)
T ss_pred --------------------eEeeCCeeEEeC-CC----------CCc-cccccCCCCCHHHHHHHHhh-cCCcEEEEeC
Confidence 011111110000 00 000 00001113579999998876 5678899999
Q ss_pred CCCChhhhhhcCeeEEecCC-cchhhhhccccccccchhhHHHH
Q 001017 859 GANDVGMLQEADIGVGISGV-EGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 859 G~ND~~ml~~A~vGI~i~g~-~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
|.||..|.+.||++++-..- +-.+-...+.+.+.+|..+...|
T Consensus 165 g~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 165 SVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred CHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHH
Confidence 99999999999997765311 11111222444455566555553
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00027 Score=78.55 Aligned_cols=180 Identities=12% Similarity=0.062 Sum_probs=94.1
Q ss_pred cCCCCcHHHHHHHHH-cCCeEEEEcCCChhhHHHHHHHcCc--ccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhH
Q 001017 700 KLQNGVPECIDKLAQ-AGIKLWVLTGDKMETAINIGFACSL--LRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~-aGIkv~mlTGD~~~ta~~ia~~~gi--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1189)
.+-+++.++|+.|++ .|++++++||+....+..+...+++ +..++..+.-.........+..+. ...+ .+.+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~-~~~i----~~~l 110 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAI-ARDI----SVQL 110 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhH-HHHH----HHHH
Confidence 455788999999998 8999999999999999888876653 222222221111100001111111 1111 1111
Q ss_pred HHHHhhh-hhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccc------eeEEEeCCcc--cHHHHHHHHHh
Q 001017 777 LHQLIRG-KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA------SVICCRSSPK--QKALVTRLVKT 847 (1189)
Q Consensus 777 ~~~~~~~-~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~------~vv~~r~sP~--qK~~iV~~l~~ 847 (1189)
....... ...+ ..+...++........ ..+.+......+..... ..-+..+.|. +|+..++.+.+
T Consensus 111 ~~~~~~~pg~~v-----e~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~ 184 (266)
T PRK10187 111 HTALAQLPGAEL-----EAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQ 184 (266)
T ss_pred HHHhccCCCcEE-----EeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHH
Confidence 1111110 0111 1122233333322211 01111111112221111 1123344454 89999998776
Q ss_pred cCC---CeEEEEcCCCCChhhhhhc----CeeEEecCCcchhhhhccccccccch
Q 001017 848 KTS---STTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQFR 895 (1189)
Q Consensus 848 ~~~---~~vl~iGDG~ND~~ml~~A----~vGI~i~g~~~~~a~~~sD~~i~~f~ 895 (1189)
..+ ..++++||+.||.+|++.+ +.||+|+... ..|++.+.+-.
T Consensus 185 ~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~-----~~A~~~l~~~~ 234 (266)
T PRK10187 185 EAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA-----TQASWRLAGVP 234 (266)
T ss_pred hcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC-----CcCeEeCCCHH
Confidence 543 6799999999999999999 8999995432 35777777633
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00011 Score=76.59 Aligned_cols=40 Identities=20% Similarity=0.165 Sum_probs=37.7
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
+++++.+.++.+++.|++++++||.....+..++...|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999999874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00014 Score=77.49 Aligned_cols=112 Identities=12% Similarity=0.023 Sum_probs=77.9
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHH
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1189)
..++++++.++|+.+++.|++++++||-....+..+++.+|+..--...+....+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 45789999999999999999999999999999999999999832100000000000
Q ss_pred HHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCC---CeEE
Q 001017 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTL 854 (1189)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~---~~vl 854 (1189)
..+|+.. .-.+.++.|...++.+.+..+ +.++
T Consensus 141 ----------------------~~~g~~~-----------------------~~~~~g~~K~~~l~~~~~~~~~~~~~~~ 175 (202)
T TIGR01490 141 ----------------------IYTGNID-----------------------GNNCKGEGKVHALAELLAEEQIDLKDSY 175 (202)
T ss_pred ----------------------EEeCCcc-----------------------CCCCCChHHHHHHHHHHHHcCCCHHHcE
Confidence 1122111 012345678777766544233 4789
Q ss_pred EEcCCCCChhhhhhcCeeEEecCC
Q 001017 855 AIGDGANDVGMLQEADIGVGISGV 878 (1189)
Q Consensus 855 ~iGDG~ND~~ml~~A~vGI~i~g~ 878 (1189)
++||+.+|.+|++.|+.++.+...
T Consensus 176 ~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 176 AYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred eeeCCcccHHHHHhCCCcEEeCCC
Confidence 999999999999999999988643
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00023 Score=74.78 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=38.9
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+....|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 478999999999999999999999999999999999888874
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0002 Score=69.27 Aligned_cols=97 Identities=15% Similarity=0.231 Sum_probs=73.6
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhc
Q 001017 707 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 786 (1189)
Q Consensus 707 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1189)
.-|+.|.++||++-++||++...+..=|+++||-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 46999999999999999999999999999999821
Q ss_pred cccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcC---CCeEEEEcCCCCCh
Q 001017 787 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAIGDGANDV 863 (1189)
Q Consensus 787 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~---~~~vl~iGDG~ND~ 863 (1189)
+.-| -.+|....+.+.+.. -+.|+.+||-.||.
T Consensus 77 -------------~~qG-------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 77 -------------LYQG-------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred -------------eeec-------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 0001 134554444444333 36899999999999
Q ss_pred hhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 864 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 864 ~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
|+|+..+++++..+.... .++.||++...
T Consensus 113 pvm~~vGls~a~~dAh~~-v~~~a~~Vt~~ 141 (170)
T COG1778 113 PVMEKVGLSVAVADAHPL-LKQRADYVTSK 141 (170)
T ss_pred HHHHHcCCcccccccCHH-HHHhhHhhhhc
Confidence 999999999998655433 67788888763
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00043 Score=74.83 Aligned_cols=39 Identities=13% Similarity=0.234 Sum_probs=36.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
+++||+.++++.|++.|+++.++||-....+..+.+.. +
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~ 112 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-I 112 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-C
Confidence 68999999999999999999999999999999988887 5
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0002 Score=70.49 Aligned_cols=44 Identities=27% Similarity=0.284 Sum_probs=40.4
Q ss_pred ecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 697 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 697 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
-..++.+++++++++|++.|++++++||.....+......+|+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 34588999999999999999999999999999999999999873
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0039 Score=79.73 Aligned_cols=184 Identities=14% Similarity=0.093 Sum_probs=96.4
Q ss_pred CCCCcHHHHHHHHH-cCCeEEEEcCCChhhHHHHHHHcC--cccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHH
Q 001017 701 LQNGVPECIDKLAQ-AGIKLWVLTGDKMETAINIGFACS--LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (1189)
Q Consensus 701 lr~~v~~~I~~L~~-aGIkv~mlTGD~~~ta~~ia~~~g--i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1189)
+-+++.++|+.|.+ .|+.|+++||+............+ ++.+++..+...+..-.........-...+.. +.
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~-----il 589 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRP-----IL 589 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHH-----HH
Confidence 56788899999999 699999999999998887765444 34444443332211100000001011111111 11
Q ss_pred HHHhh-hhhccccCCCCCCCeEEEEcCch----hhhhhhHHHHHHHHHHHhccceeE-----EEeCCc--ccHHHHHHHH
Q 001017 778 HQLIR-GKELLDSSNESLGPLALIIDGKS----LTYALEDDVKDLFLELAIGCASVI-----CCRSSP--KQKALVTRLV 845 (1189)
Q Consensus 778 ~~~~~-~~~~~~~~~~~~~~~~lvi~G~~----l~~~~~~~~~~~~~~~~~~~~~vv-----~~r~sP--~qK~~iV~~l 845 (1189)
..... ....+. ......+...-.. +.....+++.+.+..........+ +..+.| -+|+..++.+
T Consensus 590 ~~~~~~~~gs~i----e~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~l 665 (726)
T PRK14501 590 EEFVDRTPGSFI----EEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRL 665 (726)
T ss_pred HHHHhcCCCcEE----EEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHH
Confidence 11110 000010 0111223322111 111111234444443322222222 124445 4899999998
Q ss_pred Hhc-CCCeEEEEcCCCCChhhhhhc---CeeEEecCCcchhhhhccccccccchhhH
Q 001017 846 KTK-TSSTTLAIGDGANDVGMLQEA---DIGVGISGVEGMQAVMSSDIAIAQFRFLE 898 (1189)
Q Consensus 846 ~~~-~~~~vl~iGDG~ND~~ml~~A---~vGI~i~g~~~~~a~~~sD~~i~~f~~l~ 898 (1189)
.+. ....++++||+.||.+|++.+ +.||+|++ +..+|++.+.+-.-+.
T Consensus 666 l~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~~~~eV~ 717 (726)
T PRK14501 666 LEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLPSQREVR 717 (726)
T ss_pred HhcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCCCHHHHH
Confidence 874 236899999999999999997 57777744 2457888888644433
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0011 Score=72.11 Aligned_cols=42 Identities=26% Similarity=0.249 Sum_probs=38.7
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
-++.+|+.+.++.|++.|+++.++||.....+..+.+..|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468899999999999999999999999999999999988874
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0014 Score=70.92 Aligned_cols=44 Identities=30% Similarity=0.254 Sum_probs=41.0
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
+..+-+|++++++.|+++|++..++|++....+..+.+..|+..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~ 130 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD 130 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc
Confidence 56788999999999999999999999999999999999999854
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.001 Score=71.02 Aligned_cols=41 Identities=29% Similarity=0.340 Sum_probs=37.7
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+|+.++++.|+++|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 78899999999999999999999999988888888888874
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0047 Score=67.86 Aligned_cols=164 Identities=19% Similarity=0.202 Sum_probs=84.2
Q ss_pred HHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccc---c-chhhHHHHHHHHHH-HhHHHHHhhhhhc
Q 001017 712 LAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT---L-EKSEDKSAAAAALK-ASVLHQLIRGKEL 786 (1189)
Q Consensus 712 L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~---~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 786 (1189)
..+.++...++||++.+.+..+.++.++..++ +.+.+...++.. . .+..-...+..... +.+..-+.. ...
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd---~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~-~~~ 106 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPD---YIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAE-LPG 106 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-S---EEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHC-HCC
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCC---EEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHH-hhC
Confidence 44788999999999999999999999986542 111111111111 1 11111222221111 111111111 111
Q ss_pred cc-c--CCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeE----EEeCCcc--cHHHHHHHHHhcCC---CeEE
Q 001017 787 LD-S--SNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVI----CCRSSPK--QKALVTRLVKTKTS---STTL 854 (1189)
Q Consensus 787 ~~-~--~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv----~~r~sP~--qK~~iV~~l~~~~~---~~vl 854 (1189)
+. + ........+..++.......+ +++...+......|+.+. +..+-|. .|...|+.+++..+ +.|+
T Consensus 107 l~~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl 185 (247)
T PF05116_consen 107 LRPQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVL 185 (247)
T ss_dssp EEEGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEE
T ss_pred cccCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEE
Confidence 11 1 111223445555555443322 234444433333333221 2344553 79999999998643 5799
Q ss_pred EEcCCCCChhhhhhcCeeEEecCCcc
Q 001017 855 AIGDGANDVGMLQEADIGVGISGVEG 880 (1189)
Q Consensus 855 ~iGDG~ND~~ml~~A~vGI~i~g~~~ 880 (1189)
++||+.||.+||..++-||.+++...
T Consensus 186 ~aGDSgND~~mL~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 186 VAGDSGNDLEMLEGGDHGVVVGNAQP 211 (247)
T ss_dssp EEESSGGGHHHHCCSSEEEE-TTS-H
T ss_pred EEeCCCCcHHHHcCcCCEEEEcCCCH
Confidence 99999999999999999999976554
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0031 Score=70.45 Aligned_cols=42 Identities=12% Similarity=0.149 Sum_probs=37.2
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
..++.+|+.++++.|++.|+++.++||-....+..+....|+
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 347889999999999999999999999988888888777776
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0053 Score=67.40 Aligned_cols=49 Identities=18% Similarity=0.351 Sum_probs=39.8
Q ss_pred EEeCCcc--cHHHHHHHHHhcCCCeEEEEcC----CCCChhhhhh-cCeeEEecCCcc
Q 001017 830 CCRSSPK--QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQE-ADIGVGISGVEG 880 (1189)
Q Consensus 830 ~~r~sP~--qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~-A~vGI~i~g~~~ 880 (1189)
+..+.|. +|+..++.|+ ....|+++|| |.||.+||+. .=.|+.+++-+.
T Consensus 180 ~iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 180 SFDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 4455554 7999999998 5789999999 8999999997 555889987554
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.018 Score=63.24 Aligned_cols=66 Identities=11% Similarity=0.097 Sum_probs=48.4
Q ss_pred eCCcccHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhc--------CeeEEecCCcchhhhhccccccccchhhHHH
Q 001017 832 RSSPKQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEA--------DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 832 r~sP~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A--------~vGI~i~g~~~~~a~~~sD~~i~~f~~l~~l 900 (1189)
+..+.+|+..++.+.+..+ ..++++||+.||..|++.+ ..||.+. .+. .+..|++.+.+..-+...
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g~-~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SGS-KKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cCC-cCCCceEeCCCHHHHHHH
Confidence 3445589998888776433 5799999999999999999 4677774 121 456789998876655444
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0034 Score=67.47 Aligned_cols=41 Identities=20% Similarity=0.188 Sum_probs=38.1
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+|+.++++.|++.|+++.++|+-....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 58899999999999999999999999999999999988874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0062 Score=67.88 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=38.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.||+.++++.|++.|+++.++|+.....+..+-+.+|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999999999974
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0044 Score=67.45 Aligned_cols=41 Identities=22% Similarity=0.101 Sum_probs=36.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.||+.++++.|++.|+++.++|+.....+..+-...|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 57899999999999999999999999988887777777763
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0088 Score=63.94 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=75.1
Q ss_pred cCCCCcHHHHH-HHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 700 KLQNGVPECID-KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 700 ~lr~~v~~~I~-~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
.+.|++.++|+ .+++.|++++++|+-....+..+|+..++.... .++...-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57999999996 789899999999999999999999997664321 22211111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcC
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGD 858 (1189)
+-+|. -+..-.|.-++|..-++..-........+-||
T Consensus 147 ---------------------~~~gg----------------------~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsD 183 (210)
T TIGR01545 147 ---------------------RGNGG----------------------WVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSD 183 (210)
T ss_pred ---------------------EeCCc----------------------eEcCccCCChHHHHHHHHHhCCChhheEEecC
Confidence 00110 00122355677876555332212345679999
Q ss_pred CCCChhhhhhcCeeEEecCCc
Q 001017 859 GANDVGMLQEADIGVGISGVE 879 (1189)
Q Consensus 859 G~ND~~ml~~A~vGI~i~g~~ 879 (1189)
+.||.|||+.||..+++....
T Consensus 184 S~~D~pmL~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 184 SKQDNPLLAFCEHRWRVSKRG 204 (210)
T ss_pred CcccHHHHHhCCCcEEECcch
Confidence 999999999999999996543
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0052 Score=66.13 Aligned_cols=41 Identities=22% Similarity=0.058 Sum_probs=37.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+|+.++++.|+++|+++.++||.....+..+-...|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 37899999999999999999999999999998888888874
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0081 Score=65.97 Aligned_cols=44 Identities=16% Similarity=0.255 Sum_probs=40.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCC
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG 743 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~ 743 (1189)
+++||+++.++.|++.|+++.++||-....+..+.++.|+...+
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 57999999999999999999999999999999999999986544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0096 Score=65.88 Aligned_cols=42 Identities=17% Similarity=0.097 Sum_probs=38.3
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
++.+|+.++++.|++.|+++.++|+.....+..+-..+|+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 150 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG 150 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh
Confidence 578999999999999999999999999999999988888743
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.085 Score=60.84 Aligned_cols=67 Identities=13% Similarity=0.139 Sum_probs=47.2
Q ss_pred EeCCc---ccHHHHHHHHHhcCC---C---eEEEEcCCCCChhhhhh-----cCeeEEecCCcchhhhhccccccccchh
Q 001017 831 CRSSP---KQKALVTRLVKTKTS---S---TTLAIGDGANDVGMLQE-----ADIGVGISGVEGMQAVMSSDIAIAQFRF 896 (1189)
Q Consensus 831 ~r~sP---~qK~~iV~~l~~~~~---~---~vl~iGDG~ND~~ml~~-----A~vGI~i~g~~~~~a~~~sD~~i~~f~~ 896 (1189)
..+.| -+|+..|+.+.+..+ . .++++||+.||..|++. +++||+|+.... ...|+|.+.+-.-
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~e 368 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSE 368 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHH
Confidence 34555 389999998876543 1 25899999999999996 588998864222 2357888877544
Q ss_pred hHHH
Q 001017 897 LERL 900 (1189)
Q Consensus 897 l~~l 900 (1189)
+..+
T Consensus 369 V~~~ 372 (384)
T PLN02580 369 VMEF 372 (384)
T ss_pred HHHH
Confidence 4444
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.012 Score=60.16 Aligned_cols=159 Identities=18% Similarity=0.194 Sum_probs=87.2
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++-||+.+|++.|++.= ..++++---..-+..+|..+|+...+.....++.++.... ... + +++...
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~P---eee-R--------~E~L~~ 149 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVP---EEE-R--------EELLSI 149 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCC---hHH-H--------HHHHHh
Confidence 46799999999998764 4445555566678888888888543322222222211111 000 0 111111
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHH----HHHHHHHhccceeEEEeCCcccHHHHHHHHHhcC--CCeE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVK----DLFLELAIGCASVICCRSSPKQKALVTRLVKTKT--SSTT 853 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~----~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~--~~~v 853 (1189)
+. ..-.++|+.|-.-+++-+. ....+++...++|-. ..|+++++.+-+.. ....
T Consensus 150 ~~---------------~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGg-----g~ka~i~e~~~ele~~d~sa 209 (315)
T COG4030 150 ID---------------VIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGG-----GEKAKIMEGYCELEGIDFSA 209 (315)
T ss_pred cC---------------ccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccC-----cchhHHHHHHHhhcCCCcce
Confidence 10 0114555555433332100 111122222221111 35667776665532 2347
Q ss_pred EEEcCCCCChhhhhhc----CeeEEecCCcchhhhhcccccccc
Q 001017 854 LAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 854 l~iGDG~ND~~ml~~A----~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
+++||+..|+.||+.+ ++.|+..|++- |..-||+++..
T Consensus 210 ~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvis 251 (315)
T COG4030 210 VVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVIS 251 (315)
T ss_pred eEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEec
Confidence 9999999999999988 36677788887 88889998876
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0025 Score=53.87 Aligned_cols=46 Identities=20% Similarity=0.156 Sum_probs=39.0
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccc
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFT 96 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~ 96 (1189)
.++|+++||+|.++..+.+.+. +.+++||.+|+.++++++++++++
T Consensus 16 v~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 16 AARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4677889999999998744432 889999999999999999999886
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.011 Score=64.00 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=38.8
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
-++-||+.++++.|++.|+++.++||.....+..+.+..|+..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 133 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD 133 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh
Confidence 4688999999999999999999999999999999998888743
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.0014 Score=56.37 Aligned_cols=45 Identities=27% Similarity=0.316 Sum_probs=37.7
Q ss_pred chhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhc
Q 001017 47 SFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILS 94 (1189)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~ 94 (1189)
+.++|+++||+|.++..+...+. +.+++||.+|+++++++++++|
T Consensus 25 ev~~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 25 EVEERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 34778889999999766665553 8999999999999999999885
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.027 Score=60.38 Aligned_cols=111 Identities=14% Similarity=0.083 Sum_probs=76.1
Q ss_pred cCCCCcHHHH-HHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 700 KLQNGVPECI-DKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 700 ~lr~~v~~~I-~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
.+.|++.++| +.+++.|++++++|+-....+..++..+|+.. ...++...-+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4589999999 57899999999999999999999999988632 1122211100
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcC
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGD 858 (1189)
...+|. +..-.|..+.|..-++..-........+-||
T Consensus 148 --------------------~~~tg~-----------------------~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~D 184 (211)
T PRK11590 148 --------------------RRYGGW-----------------------VLTLRCLGHEKVAQLERKIGTPLRLYSGYSD 184 (211)
T ss_pred --------------------EEEccE-----------------------ECCccCCChHHHHHHHHHhCCCcceEEEecC
Confidence 011111 1122355677876555432113455679999
Q ss_pred CCCChhhhhhcCeeEEecCCcc
Q 001017 859 GANDVGMLQEADIGVGISGVEG 880 (1189)
Q Consensus 859 G~ND~~ml~~A~vGI~i~g~~~ 880 (1189)
+.||.|||+.|+-++++.....
T Consensus 185 s~~D~pmL~~a~~~~~vnp~~~ 206 (211)
T PRK11590 185 SKQDNPLLYFCQHRWRVTPRGE 206 (211)
T ss_pred CcccHHHHHhCCCCEEECccHH
Confidence 9999999999999999965543
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.19 Score=64.72 Aligned_cols=177 Identities=10% Similarity=0.069 Sum_probs=87.0
Q ss_pred cCceEEEeeeecccCCCCcHHHHHHH-HHcCCeEEEEcCCChhhHHHHHHH---cCcccCCceEEEEeCCCCcccccchh
Q 001017 687 KNLILLGATAVEDKLQNGVPECIDKL-AQAGIKLWVLTGDKMETAINIGFA---CSLLRQGMRQVIISSETPESKTLEKS 762 (1189)
Q Consensus 687 ~~l~llG~~~ieD~lr~~v~~~I~~L-~~aGIkv~mlTGD~~~ta~~ia~~---~gi~~~~~~~~~i~~~~~~~~~~~~~ 762 (1189)
-|.||+-.....-.+-+++.+++++| ++.|+.|+++||+...+....-.. ++++.+++..+...+...- +.. .
T Consensus 603 yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w--~~~-~ 679 (854)
T PLN02205 603 YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEW--ETC-V 679 (854)
T ss_pred cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCcee--eec-c
Confidence 34455533222224556788899987 778999999999999998887654 4455555544432222100 000 0
Q ss_pred hHHHHHHHHHHHhHHHHH-hhhhhccccCCCCCCCeEEEEcCchhhhhh----hHHHHHHHHHHHhccceeE-----EEe
Q 001017 763 EDKSAAAAALKASVLHQL-IRGKELLDSSNESLGPLALIIDGKSLTYAL----EDDVKDLFLELAIGCASVI-----CCR 832 (1189)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~----~~~~~~~~~~~~~~~~~vv-----~~r 832 (1189)
...+...+.....+.... ......+. ..+..+++.+-...+.-. .+++..++..........+ +..
T Consensus 680 ~~~~~~w~~~v~~i~~~y~ertpGs~I----E~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvE 755 (854)
T PLN02205 680 PVADCSWKQIAEPVMQLYTETTDGSTI----EDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVE 755 (854)
T ss_pred hhhhHHHHHHHHHHHHHHhcCCCchhh----eecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEE
Confidence 000011111111111111 00000000 122344444332221101 1233344433322211111 123
Q ss_pred CCcc--cHHHHHHHHHhc---CC---CeEEEEcCCCCChhhhhhcC
Q 001017 833 SSPK--QKALVTRLVKTK---TS---STTLAIGDGANDVGMLQEAD 870 (1189)
Q Consensus 833 ~sP~--qK~~iV~~l~~~---~~---~~vl~iGDG~ND~~ml~~A~ 870 (1189)
+.|. .|+..++.+.+. .| ..++++||+.||.+|++.++
T Consensus 756 V~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 756 VKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred EEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 3444 799999988531 23 47999999999999999886
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.022 Score=61.53 Aligned_cols=40 Identities=20% Similarity=0.201 Sum_probs=33.3
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
++.||+.++++.|+++|+++.++|+.....+...-...|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999877666555555555
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.23 Score=56.87 Aligned_cols=229 Identities=10% Similarity=0.067 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHH---------HhcCceEEEeeeecc--cCCCCcHHHHHHHHHcCCeEEE
Q 001017 653 EKEYKQFNEEFTEAKNSVSADREELAEEIAEK---------IEKNLILLGATAVED--KLQNGVPECIDKLAQAGIKLWV 721 (1189)
Q Consensus 653 ~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~---------ie~~l~llG~~~ieD--~lr~~v~~~I~~L~~aGIkv~m 721 (1189)
.++|..|..++-.|...+ +..... +.-|.||+-++.-.| .+-++..++|++|. .|+++++
T Consensus 83 ~~~~~~w~~~~psal~~~--------~~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaI 153 (366)
T PLN03017 83 QQQLNSWIMQHPSALEMF--------EQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAI 153 (366)
T ss_pred hhhhhHHHhhCChHHHHH--------HHHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEE
Confidence 567888988876665444 112211 112444443333333 37788899999999 7899999
Q ss_pred EcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcc-----cccc-------hhhHHHHHHHHHHHhHHHHHhhhhhcccc
Q 001017 722 LTGDKMETAINIGFACSLLRQGMRQVIISSETPES-----KTLE-------KSEDKSAAAAALKASVLHQLIRGKELLDS 789 (1189)
Q Consensus 722 lTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~-----~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (1189)
+||+.......+. ++ .+..++..+|..... .... ...... .....+.+...+.........
T Consensus 154 vSGR~~~~l~~~~---~l--~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~~~~~~~--~~~~i~~v~~~L~~~~~~~pG 226 (366)
T PLN03017 154 VTGRCIDKVYNFV---KL--AELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPAND--YLPMIDEVYRQLLEKTKSTPG 226 (366)
T ss_pred EeCCCHHHHHHhh---cc--cCceEEEcCCcEEecCCCcceeccccccccccccchh--hHHHHHHHHHHHHHHHhcCCC
Confidence 9999999988873 22 112222222221000 0000 000000 000111111111111111110
Q ss_pred CCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccc------eeEEEeCCc---ccHHHHHHHHHhcCC------CeEE
Q 001017 790 SNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA------SVICCRSSP---KQKALVTRLVKTKTS------STTL 854 (1189)
Q Consensus 790 ~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~------~vv~~r~sP---~qK~~iV~~l~~~~~------~~vl 854 (1189)
..-..+.+++.+.-.........++...+...+.... ..-..++.| -+|+..++.+.+..+ ..++
T Consensus 227 a~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pv 306 (366)
T PLN03017 227 AKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPV 306 (366)
T ss_pred CEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEE
Confidence 0002344555554443332221233333333222211 112233444 499999998876432 3689
Q ss_pred EEcCCCCChhhhhhc-----CeeEEecCCcchhhhhccccccccchhhHHH
Q 001017 855 AIGDGANDVGMLQEA-----DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 855 ~iGDG~ND~~ml~~A-----~vGI~i~g~~~~~a~~~sD~~i~~f~~l~~l 900 (1189)
++||...|-.|++.. ++||.++.... ...|+|.+.+-.-+..+
T Consensus 307 yiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~dp~eV~~f 354 (366)
T PLN03017 307 YIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQDPSEVMDF 354 (366)
T ss_pred EeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCCHHHHHHH
Confidence 999999999998866 35665642121 24678888774443333
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.026 Score=62.52 Aligned_cols=42 Identities=29% Similarity=0.195 Sum_probs=37.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 467999999999999999999999999999888888888743
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.042 Score=61.33 Aligned_cols=41 Identities=27% Similarity=0.141 Sum_probs=35.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++-||+.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56799999999999999999999999988877776666653
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.025 Score=61.03 Aligned_cols=42 Identities=24% Similarity=0.175 Sum_probs=38.9
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
.++.+|+.++++.|++.|+++.++||-..+.+..+....|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999998888874
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.043 Score=56.73 Aligned_cols=41 Identities=20% Similarity=0.215 Sum_probs=31.8
Q ss_pred cCceEEEeeeecc----cCCCCcHHHHHHHHHcCCeEEEEcCCCh
Q 001017 687 KNLILLGATAVED----KLQNGVPECIDKLAQAGIKLWVLTGDKM 727 (1189)
Q Consensus 687 ~~l~llG~~~ieD----~lr~~v~~~I~~L~~aGIkv~mlTGD~~ 727 (1189)
.|.++.|-..+.+ ++.||++++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4555655544443 3689999999999999999999998753
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.04 Score=63.61 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=38.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
++.+|+.++++.|+++|+++.++|+-....+..+-+..||..
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~ 257 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG 257 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH
Confidence 477999999999999999999999999999999999888843
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.019 Score=62.15 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=35.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCC----ChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGD----KMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD----~~~ta~~ia~~~gi~ 740 (1189)
.+.+++.++++.+++.|+++.++|+. ...++..+.+..|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 34555999999999999999999998 667899999899984
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.032 Score=59.14 Aligned_cols=43 Identities=21% Similarity=0.108 Sum_probs=39.0
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++++.++++++++.|++.|+++.++||-....+..+-+..|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4567788899999999999999999999999999999999974
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.057 Score=53.02 Aligned_cols=41 Identities=20% Similarity=0.230 Sum_probs=35.2
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCC--------hhhHHHHHHHcCc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDK--------METAINIGFACSL 739 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~--------~~ta~~ia~~~gi 739 (1189)
-++.+++.++++.|+++|+++.++|+.. .+.+..+.+.+|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999988 6667777777776
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.08 Score=64.05 Aligned_cols=42 Identities=14% Similarity=0.097 Sum_probs=38.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
++.||+.++++.|++.|+++.++|+-..+.+..+-..+|+..
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~ 371 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ 371 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh
Confidence 688999999999999999999999999999999999888743
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.052 Score=59.87 Aligned_cols=41 Identities=22% Similarity=0.089 Sum_probs=37.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.||+.++++.|++.|+++.++|+-....+..+-+..|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999998888874
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.068 Score=57.70 Aligned_cols=41 Identities=15% Similarity=0.146 Sum_probs=36.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.||+.++++.|++.|++++++|+-....+....+.+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 57899999999999999999999999888888887888873
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.1 Score=52.82 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=31.6
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHH
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI 731 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~ 731 (1189)
+|.+.+++.+++++++++|++++++||+....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988774
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.079 Score=59.65 Aligned_cols=38 Identities=26% Similarity=0.265 Sum_probs=32.2
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 737 (1189)
++.||+.++++.|++.|+++.++|+-.......+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998877776654443
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.096 Score=52.35 Aligned_cols=38 Identities=16% Similarity=0.248 Sum_probs=31.5
Q ss_pred ccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEE
Q 001017 836 KQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVG 874 (1189)
Q Consensus 836 ~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~ 874 (1189)
.+|..+|+.+++ ..+.+.++|||.-|++|-+.+|+=.|
T Consensus 146 ~dK~~vI~~l~e-~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 146 HDKSSVIHELSE-PNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CCcchhHHHhhc-CCceEEEecCCcccccHhhhhhhHhh
Confidence 479999999998 78889999999999887666665443
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.062 Score=58.17 Aligned_cols=40 Identities=13% Similarity=0.167 Sum_probs=35.2
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCC----hhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDK----METAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~----~~ta~~ia~~~gi 739 (1189)
.+.+|+.++++.|++.|+++.++||+. ..|+.++.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 467889999999999999999999974 5588888888887
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.53 Score=48.69 Aligned_cols=37 Identities=8% Similarity=0.135 Sum_probs=32.6
Q ss_pred CcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 704 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 704 ~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
.+.+.+..|+++|++|+.+|.-....-...-+++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999888888888888873
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.16 Score=54.95 Aligned_cols=40 Identities=18% Similarity=0.071 Sum_probs=33.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+|+.++++.|+ +|+++.++|+.....+...-...|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 47899999999999 68999999998888777777777763
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.14 Score=53.36 Aligned_cols=52 Identities=13% Similarity=0.095 Sum_probs=34.9
Q ss_pred CCCeEEEEcCCCCChhhhhhcCeeE-Eec-CCcc-hhhhhcc--ccccccchhhHHH
Q 001017 849 TSSTTLAIGDGANDVGMLQEADIGV-GIS-GVEG-MQAVMSS--DIAIAQFRFLERL 900 (1189)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~A~vGI-~i~-g~~~-~~a~~~s--D~~i~~f~~l~~l 900 (1189)
..+.+++|||+.+|+.+-+.|++.. ++. |... ......+ |+++.++.-+..+
T Consensus 119 ~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 119 DLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred ChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 3478999999999999999999854 442 2211 1112235 8888877766655
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.096 Score=55.48 Aligned_cols=41 Identities=17% Similarity=0.184 Sum_probs=36.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+|+.++++.|++.|+++.++|+-....+..+...+|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 57899999999999999999999998888888888888873
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.14 Score=55.36 Aligned_cols=32 Identities=22% Similarity=0.334 Sum_probs=27.6
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETA 730 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta 730 (1189)
-++.+|+.++|+.|++.|+++.++||-.....
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 35789999999999999999999998766543
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.18 Score=51.85 Aligned_cols=53 Identities=23% Similarity=0.185 Sum_probs=43.3
Q ss_pred CceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCC-ChhhHHHHHHHcCcc
Q 001017 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD-KMETAINIGFACSLL 740 (1189)
Q Consensus 688 ~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD-~~~ta~~ia~~~gi~ 740 (1189)
+.......+-+-++.+|+.++++.|+++|+++.++|+- ....+..+-...|+.
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 33355555556688999999999999999999999975 888888888888873
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.066 Score=60.92 Aligned_cols=44 Identities=20% Similarity=0.083 Sum_probs=40.8
Q ss_pred ecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 697 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 697 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
..+++.+++.++++.|++.|++++++||....++..+...+++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 56789999999999999999999999999999999999888874
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.092 Score=54.84 Aligned_cols=39 Identities=21% Similarity=0.275 Sum_probs=31.2
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
.++.||+.++|+.|+++|+++.++|+.. .+..+.+..|+
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l 124 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGL 124 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCc
Confidence 3678999999999999999999999753 24455666665
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.1 Score=54.47 Aligned_cols=40 Identities=18% Similarity=0.228 Sum_probs=33.7
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
-++.||+.++++.|++.|+++.++|+- ..+..+-+..|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 468999999999999999999999987 5566666777763
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.22 Score=53.97 Aligned_cols=41 Identities=15% Similarity=0.055 Sum_probs=36.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+|+.++++.|++.|+++.++|+-..+.+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 67899999999999999999999998888877776777764
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.18 Score=52.46 Aligned_cols=40 Identities=25% Similarity=0.215 Sum_probs=33.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+|+.++++.|++.|++++++|+-.... ..+..++|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 578999999999999999999999988777 5555557763
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.60 E-value=2.2 Score=48.79 Aligned_cols=231 Identities=14% Similarity=0.123 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHH---------hcCceEEEeeeeccc--CCCCcHHHHHHHHHcCCeEEEE
Q 001017 654 KEYKQFNEEFTEAKNSVSADREELAEEIAEKI---------EKNLILLGATAVEDK--LQNGVPECIDKLAQAGIKLWVL 722 (1189)
Q Consensus 654 ~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~i---------e~~l~llG~~~ieD~--lr~~v~~~I~~L~~aGIkv~ml 722 (1189)
++|..|..++-.|...+ +...... .-|.||+-++.--|. +-++..++|+.|. .+..+.++
T Consensus 71 ~~~~~w~~~~p~a~~~~--------~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIv 141 (354)
T PLN02151 71 NKQSCWIKEHPSALNMF--------EEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIV 141 (354)
T ss_pred hhHHHHHHhCChHHHHH--------HHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEE
Confidence 57889999887776554 1222221 123333332222232 5577888999999 56799999
Q ss_pred cCCChhhHHHHHHHcCc--cc-CCceEEEEeCCCCcccccchhh--HHHHHH---HHHHHhHHHHHhhhhhccccCCCCC
Q 001017 723 TGDKMETAINIGFACSL--LR-QGMRQVIISSETPESKTLEKSE--DKSAAA---AALKASVLHQLIRGKELLDSSNESL 794 (1189)
Q Consensus 723 TGD~~~ta~~ia~~~gi--~~-~~~~~~~i~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1189)
||+.......+..-.++ .. .++. +..... ........ ...... ....+.+...+...........-..
T Consensus 142 SGR~~~~l~~~~~~~~l~laGsHG~e---~~~p~~-g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~ 217 (354)
T PLN02151 142 SGRCREKVSSFVKLTELYYAGSHGMD---IKGPEQ-GSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVEN 217 (354)
T ss_pred ECCCHHHHHHHcCCccceEEEeCCce---eecCCC-CccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEe
Confidence 99999988877643332 11 1111 110000 00000000 000000 0000111111111000010000022
Q ss_pred CCeEEEEcCchhhhhhhHHHHHHHHHHHhc--------cceeEEEeCC-cccHHHHHHHHHhcCC------CeEEEEcCC
Q 001017 795 GPLALIIDGKSLTYALEDDVKDLFLELAIG--------CASVICCRSS-PKQKALVTRLVKTKTS------STTLAIGDG 859 (1189)
Q Consensus 795 ~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~--------~~~vv~~r~s-P~qK~~iV~~l~~~~~------~~vl~iGDG 859 (1189)
+.+++.+.=.........++...+..++.. .+.|+=.|.. .-+|+..|+.+.+..+ ..++++||-
T Consensus 218 K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD 297 (354)
T PLN02151 218 NKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDD 297 (354)
T ss_pred cCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCC
Confidence 344444443332221111223333332222 2333333432 3489999998876432 248999999
Q ss_pred CCChhhhhhc-----CeeEEecCCcchhhhhccccccccchhhHHH
Q 001017 860 ANDVGMLQEA-----DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 860 ~ND~~ml~~A-----~vGI~i~g~~~~~a~~~sD~~i~~f~~l~~l 900 (1189)
..|-.|++.. ++||-++.... .-.|++.+.+-.-+..+
T Consensus 298 ~TDEDaF~~L~~~~~G~gI~Vg~~~k---~T~A~y~L~dp~eV~~~ 340 (354)
T PLN02151 298 RTDEDAFKILRDKKQGLGILVSKYAK---ETNASYSLQEPDEVMEF 340 (354)
T ss_pred CcHHHHHHHHhhcCCCccEEeccCCC---CCcceEeCCCHHHHHHH
Confidence 9999998854 56665542111 23688888875444443
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.17 Score=59.43 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=33.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHH-HcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGF-ACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~-~~gi 739 (1189)
++.+|+.++++.|++.|+++.++|+-....+...-. ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998887766554 4565
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=93.42 E-value=0.088 Score=54.03 Aligned_cols=43 Identities=21% Similarity=0.205 Sum_probs=39.9
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
..++.+|+.++++.|++.|++++++|+-.........+..|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 5578999999999999999999999999999999999999985
|
... |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.26 Score=53.15 Aligned_cols=40 Identities=25% Similarity=0.322 Sum_probs=36.2
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+|+.++++.|++. +++.++|+-....+..+.++.|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999999888888888888874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=92.64 E-value=0.35 Score=49.79 Aligned_cols=41 Identities=20% Similarity=0.313 Sum_probs=34.3
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCC-hhhHHHHHHHcCc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDK-METAINIGFACSL 739 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~-~~ta~~ia~~~gi 739 (1189)
.++.+++.++++.|++.|+++.++|+-. ...+..+.+.+|+
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3578999999999999999999999987 5666667666665
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.16 Score=50.94 Aligned_cols=42 Identities=21% Similarity=0.041 Sum_probs=37.1
Q ss_pred ecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 697 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 697 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
..-+++||+.++++.|+ .++++.+.|+-....+..+-+.+++
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 34468999999999999 5799999999999999999888876
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=92.27 E-value=0.5 Score=48.99 Aligned_cols=27 Identities=22% Similarity=0.395 Sum_probs=24.5
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCCh
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKM 727 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~ 727 (1189)
+.||+.++|+.|+++|+++.++|.-..
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 579999999999999999999997653
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=92.22 E-value=0.39 Score=48.13 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=25.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCC
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDK 726 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~ 726 (1189)
++.||+.++++.|++.|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999875
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=92.22 E-value=0.32 Score=49.10 Aligned_cols=40 Identities=20% Similarity=0.335 Sum_probs=33.8
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 737 (1189)
+....+|+.++++.|++.|+++.++|+-....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4445689999999999999999999999988887776654
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.17 E-value=0.44 Score=48.53 Aligned_cols=26 Identities=31% Similarity=0.511 Sum_probs=23.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCC
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGD 725 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD 725 (1189)
++-+|+.++++.|+++|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46799999999999999999999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=92.00 E-value=0.74 Score=49.67 Aligned_cols=41 Identities=20% Similarity=0.169 Sum_probs=35.1
Q ss_pred cCCCCcHHHHHHH--HHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKL--AQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L--~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
|+.|+.+++++.+ ++.|+.+.++|--+.---..+-+.-|+-
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 5789999999999 5689999999988888777887777774
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=91.54 E-value=0.45 Score=50.51 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=31.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
++-||+.++++.|+++|+++.++|+-... +......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 67899999999999999999999986543 4555566665
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=91.09 E-value=0.52 Score=45.99 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=33.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCC-ChhhHHHHHHHcC
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGD-KMETAINIGFACS 738 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD-~~~ta~~ia~~~g 738 (1189)
++.+|+.++++.|+++|+++.++|+- ....+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 6776666655554
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=90.94 E-value=1 Score=49.70 Aligned_cols=42 Identities=10% Similarity=0.152 Sum_probs=32.4
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHH---HHHHHcCc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI---NIGFACSL 739 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~---~ia~~~gi 739 (1189)
..++-||+.+.++.|++.|+++.++|+....... ..-+..|+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi 160 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGF 160 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCc
Confidence 4457799999999999999999999998754433 33445565
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.18 E-value=0.86 Score=52.45 Aligned_cols=26 Identities=35% Similarity=0.415 Sum_probs=24.3
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcC
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTG 724 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTG 724 (1189)
-++.||+.++++.|+++|+++.++|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 36789999999999999999999998
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=89.15 E-value=1.2 Score=45.68 Aligned_cols=27 Identities=22% Similarity=0.406 Sum_probs=23.7
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCCh
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKM 727 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~ 727 (1189)
+-+|+.++++.|+++|+++.++|.-..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999997543
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=88.81 E-value=0.64 Score=49.72 Aligned_cols=29 Identities=24% Similarity=0.269 Sum_probs=25.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChh
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKME 728 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 728 (1189)
++.||+.++++.|++.|+++.++|+....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 57899999999999999999999987543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.73 E-value=2.6 Score=42.10 Aligned_cols=40 Identities=18% Similarity=0.236 Sum_probs=35.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
+.-|++.+=++.++++||++.++|.-+...+..++..+|+
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 4567777888999999999999999999999999999987
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.81 E-value=1 Score=48.56 Aligned_cols=39 Identities=8% Similarity=0.093 Sum_probs=31.4
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
-++.+|++++++.| ++++.++|+.....+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 35668999999998 4999999999887777766667763
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=87.48 E-value=2.3 Score=46.34 Aligned_cols=186 Identities=12% Similarity=0.110 Sum_probs=73.7
Q ss_pred cCCCCcHHHHHHHHHcC-CeEEEEcCCChhhHHHHHHH--cCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhH
Q 001017 700 KLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIGFA--CSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aG-Ikv~mlTGD~~~ta~~ia~~--~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1189)
.+-+++.++++.|.+.. ..|+|+||+..........- ++++.+++..+...+...... ........... ...+.+
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~-~~~~~~~~~~~-~~~~~l 96 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTN-LPADEDLEWKD-EVREIL 96 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE--TTGGGGHHHHH-HHHHHH
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccc-cccccchHHHH-HHHHHH
Confidence 45678889999998764 47999999999886665432 333333333333332211110 00111111111 111111
Q ss_pred HHHHhh-hhhccccCCCCCCCeEEEEcCchhhhh----hhHHHHHHHHHHHh--------ccceeEEEeCCcccHHHHHH
Q 001017 777 LHQLIR-GKELLDSSNESLGPLALIIDGKSLTYA----LEDDVKDLFLELAI--------GCASVICCRSSPKQKALVTR 843 (1189)
Q Consensus 777 ~~~~~~-~~~~~~~~~~~~~~~~lvi~G~~l~~~----~~~~~~~~~~~~~~--------~~~~vv~~r~sP~qK~~iV~ 843 (1189)
....+. ....+ ..+..++.+.-.....- ...++.+.+..+.. ..+.+|=.|..-..|+..|+
T Consensus 97 ~~~~~~~pG~~i-----E~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~ 171 (235)
T PF02358_consen 97 EYFAERTPGSFI-----EDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVR 171 (235)
T ss_dssp TTHHHHSTT-EE-----EEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHH
T ss_pred HHHHhhccCcEE-----EECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHH
Confidence 111111 01111 11223333332222211 11233333333222 22445555665567999999
Q ss_pred HHHhcCC------CeEEEEcCCCCChhhhhhc------CeeEEecCCcchhhhhccccccc
Q 001017 844 LVKTKTS------STTLAIGDGANDVGMLQEA------DIGVGISGVEGMQAVMSSDIAIA 892 (1189)
Q Consensus 844 ~l~~~~~------~~vl~iGDG~ND~~ml~~A------~vGI~i~g~~~~~a~~~sD~~i~ 892 (1189)
.+.+..+ ..++++||...|-.|++.. ++||-+...+......+|+|-+.
T Consensus 172 ~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 172 RLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp HHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred HHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 8877544 3799999999999998874 45665544332112345555443
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=87.46 E-value=1.8 Score=43.37 Aligned_cols=112 Identities=20% Similarity=0.167 Sum_probs=69.6
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
|..++|+.+..+.+++.|.+++.||++..--|...-.=+.=..++.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~---------------------------------- 71 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQG---------------------------------- 71 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCC----------------------------------
Confidence 7999999999999999999999999998654443321111000000
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc----CCCeEE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK----TSSTTL 854 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~----~~~~vl 854 (1189)
.....--+..+...+...+.. -+..+-.-+.|...++.+++. .....+
T Consensus 72 -------------~~lP~Gpv~~sP~~l~~al~r---------------Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~a 123 (157)
T PF08235_consen 72 -------------HNLPDGPVLLSPDSLFSALHR---------------EVISKDPEEFKIACLRDLRALFPPDGNPFYA 123 (157)
T ss_pred -------------ccCCCCCEEECCcchhhhhhc---------------cccccChHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 000111122222222211111 144454445788888888874 447889
Q ss_pred EEcCCCCChhhhhhcCee
Q 001017 855 AIGDGANDVGMLQEADIG 872 (1189)
Q Consensus 855 ~iGDG~ND~~ml~~A~vG 872 (1189)
+.|...+|+.+-++++|-
T Consensus 124 gfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 124 GFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ecCCcHHHHHHHHHcCCC
Confidence 999999999999988775
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=86.54 E-value=2.2 Score=45.82 Aligned_cols=40 Identities=18% Similarity=0.204 Sum_probs=33.3
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 737 (1189)
+-++.+|+.++++.|+++|+++.++|.........+-...
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 4578999999999999999999999998877666554443
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=86.33 E-value=1.3 Score=50.92 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=33.2
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 736 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 736 (1189)
++-+++.++|+.|++.|+++.++|.-....|..+-+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 4568999999999999999999999999988888766
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=85.63 E-value=3 Score=45.72 Aligned_cols=47 Identities=9% Similarity=0.133 Sum_probs=37.1
Q ss_pred EeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHH--HHHHHcCc
Q 001017 693 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI--NIGFACSL 739 (1189)
Q Consensus 693 G~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~--~ia~~~gi 739 (1189)
|.+.-.+++-||++++++.|+++|+++.++|+-....+. ...+++|+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl 65 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGI 65 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCC
Confidence 556667788999999999999999999999995544333 45566776
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=84.53 E-value=3 Score=43.95 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=27.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
++.||+.++++.|++.+ +.+++|.-+..+....-+.+++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 47899999999999985 5677777554444334444554
|
2 hypothetical protein; Provisional |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=84.15 E-value=2.8 Score=55.98 Aligned_cols=41 Identities=20% Similarity=0.024 Sum_probs=36.7
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
.+.+|+.++++.|+++|+++.++|+-....+..+-+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 46799999999999999999999999988888887888873
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.62 E-value=8.2 Score=40.41 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=31.8
Q ss_pred cCCCCcHHHHHHHHHcCC-eEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGI-KLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGI-kv~mlTGD~~~ta~~ia~~~gi 739 (1189)
|+-||+.++|+.+++.|- .+.++|--+.--...+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 567999999999999996 8889987776666666666665
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=82.26 E-value=5.2 Score=42.99 Aligned_cols=30 Identities=23% Similarity=0.285 Sum_probs=27.2
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhh
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMET 729 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 729 (1189)
+.-+++.++++.|++.|++|+++||+....
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 567899999999999999999999998754
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.82 E-value=3.5 Score=43.60 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=26.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhh
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMET 729 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 729 (1189)
++.||+.++++.|+++|+++.++|+-....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 478999999999999999999999976544
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=81.73 E-value=1.4 Score=40.92 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=36.2
Q ss_pred EeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHH---HHcCc
Q 001017 693 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG---FACSL 739 (1189)
Q Consensus 693 G~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia---~~~gi 739 (1189)
|++..-+++=||++++|+.|+++|++++++|.....+...++ +++|+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 566667888999999999999999999999999876655555 45665
|
... |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=81.12 E-value=5.5 Score=40.58 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=36.1
Q ss_pred cccCCCCcHHHHHHHHHcCC--eEEEEcCC-------ChhhHHHHHHHcCc
Q 001017 698 EDKLQNGVPECIDKLAQAGI--KLWVLTGD-------KMETAINIGFACSL 739 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGI--kv~mlTGD-------~~~ta~~ia~~~gi 739 (1189)
++++-+++.+.+++|++.+. +|+++|.- ..+.|..+++.+|+
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 67888999999999999987 49999886 36788899998886
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1189 | ||||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 6e-08 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 4e-06 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 3e-05 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-04 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 5e-04 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 5e-04 |
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1189 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-31 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-29 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 4e-28 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 2e-19 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 4e-06 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 3e-16 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 7e-05 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 6e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 2e-06 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 1e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 5e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 5e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 6e-05 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 8e-05 | |
| 3lvg_D | 190 | LCB, clathrin light chain B; SELF assembly, coated | 2e-04 | |
| 3lvg_D | 190 | LCB, clathrin light chain B; SELF assembly, coated | 3e-04 | |
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 4e-04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 5e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 1e-31
Identities = 93/480 (19%), Positives = 159/480 (33%), Gaps = 122/480 (25%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 474
E LG I SDKTGTLT N M + V + ++ +
Sbjct: 341 ETLGCTSVICSDKTGTLTTNQM---------S--------VCKMFI---IDKVDGDFCSL 380
Query: 475 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
E + + E E + N + D + + + A+C+ + + +E G E
Sbjct: 381 NEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGE 440
Query: 535 SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV 594
E A ++ + ++S E + + + LEFS RK MSV
Sbjct: 441 -ATETALTTLVEKMN--VFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSV 497
Query: 595 IVRSEEGTL-----LLLSKGA-DSVM----FERLAENGREFEEQTKEHI----NEYADA- 639
+ + + KGA + V+ + R+ KE I E+
Sbjct: 498 YCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGR 557
Query: 640 -GLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVE 698
LR L LA R+ K + ++ + + E +L +G +
Sbjct: 558 DTLRCLALATRDTPPKREEMVLDDSSR----------------FMEYETDLTFVGVVGML 601
Query: 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 758
D + V I AGI++ ++TGD TAI I R++ I E
Sbjct: 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC----------RRIGIFGEN----- 646
Query: 759 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 818
E+ D++ G+E D + +
Sbjct: 647 -EEVADRA--------------YTGREFDDLPLA----------------EQREACRR-- 673
Query: 819 LELAIGCASVICCRSSPKQKALVTRLVKT-----KTSSTTLAIGDGANDVGMLQEADIGV 873
A R P K +++V+ + ++ T GDG ND L++A+IG+
Sbjct: 674 -------ACCF-ARVEPSHK---SKIVEYLQSYDEITAMT---GDGVNDAPALKKAEIGI 719
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 1e-29
Identities = 91/492 (18%), Positives = 145/492 (29%), Gaps = 147/492 (29%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 474
E LG I SDKTGTLT N M +
Sbjct: 375 ETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIH---------------------SADTT 413
Query: 475 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
++ + ++ + R+L +C+ A +
Sbjct: 414 EDQSGQT----------------FDQSSETWRALCRVLTLCNRA--AFKSGQDAVPVPKR 455
Query: 535 S----PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 590
E A + + + + + + F+S+ K
Sbjct: 456 IVIGDASETALLKFSELTL----------GNAMGY--------RERFPKVCEIPFNSTNK 497
Query: 591 RMSVIVRSEE---GTLLLLSKGADSVMFER---LAENG--REFEEQTKEHI----NEYAD 638
I E+ +L+ KGA + ER + G +EQ +E
Sbjct: 498 FQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGG 557
Query: 639 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVE 698
G R L L EK+Y EA N L G ++
Sbjct: 558 LGERVLGFCQLYLSEKDYPPGYAFDVEAMNFP---------------TSGLSFAGLVSMI 602
Query: 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 758
D + VP+ + K AGI++ ++TGD TA I V I SE E+
Sbjct: 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIA----------ASVGIISEGSETVE 652
Query: 759 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 818
+ + + +I G +L D L + ++
Sbjct: 653 DIAARLRVPVDQVNRKDARACVINGMQLKDMDPS----------------ELVEALRTH- 695
Query: 819 LELAIGCASVICCRSSPKQKALVTRLVK-----------TKTSSTTLAIGDGANDVGMLQ 867
++ R+SP+QK +V+ T GDG ND L+
Sbjct: 696 -------PEMVFARTSPQQK---LVIVESCQRLGAIVAVT---------GDGVNDSPALK 736
Query: 868 EADIGV--GISG 877
+ADIGV GI+G
Sbjct: 737 KADIGVAMGIAG 748
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 4e-28
Identities = 102/492 (20%), Positives = 155/492 (31%), Gaps = 147/492 (29%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 474
E LG TI SDKTGTLT N M T V + +
Sbjct: 370 ETLGSTSTICSDKTGTLTQNRM---------T-----VAHM---------------WFDN 400
Query: 475 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
Q +A + + R+ A+C+ A +
Sbjct: 401 QIHEADTTENQSGAAF--------DKTSATWSALSRIAALCNRA--VFQAGQDNVPILKR 450
Query: 535 S----PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 590
S E+A + SV + + + F+S+ K
Sbjct: 451 SVAGDASESALLKCIELCC----------GSVQGM--------RDRNPKIVEIPFNSTNK 492
Query: 591 RMSVIVRSEEGT---LLLLSKGADSVMFER---LAENG--REFEEQTKEHI----NEYAD 638
I +E+ + LL+ KGA + +R + NG +E KE E
Sbjct: 493 YQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGG 552
Query: 639 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVE 698
G R L + L E +Y + + +L +G A+
Sbjct: 553 LGERVLGFCHFALPEDKYN---------------EGYPFDADEPNFPTTDLCFVGLMAMI 597
Query: 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 758
D + VP+ + K AGIK+ ++TGD TA I + V I SE E+
Sbjct: 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA----------KGVGIISEGNETIE 647
Query: 759 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 818
+ ++ G +L D S E L+D +
Sbjct: 648 DIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTE----------------VLDDILHYH- 690
Query: 819 LELAIGCASVICCRSSPKQKALVTRLVK-----------TKTSSTTLAIGDGANDVGMLQ 867
++ R+SP+QK +V+ T GDG ND L+
Sbjct: 691 -------TEIVFARTSPQQK---LIIVEGCQRQGAIVAVT---------GDGVNDSPALK 731
Query: 868 EADIGV--GISG 877
+ADIGV GISG
Sbjct: 732 KADIGVAMGISG 743
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 2e-19
Identities = 83/578 (14%), Positives = 165/578 (28%), Gaps = 148/578 (25%)
Query: 571 TKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTK 630
+ ++ L F+ KR ++ G +SKGA + E LA+ + ++
Sbjct: 386 KEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILE-LAKASNDLSKKVL 444
Query: 631 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLI 690
I++YA+ GLR+L +A + + EK E
Sbjct: 445 SIIDKYAERGLRSLAVARQVVPEKT--------------------------KESPGAPWE 478
Query: 691 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIIS 750
+G + D ++ E I + G+ + ++TGD++ G R++ +
Sbjct: 479 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG----------RRLGMG 528
Query: 751 SETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYAL 810
+ S L+ + + ++ + L DG +A
Sbjct: 529 TNMYPSSA---------------------LLGTHKDANLASIPVEELIEKADG----FA- 562
Query: 811 EDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKT-KTSSTTLA-IGDGANDVGMLQE 868
P+ K +VK + + GDG ND L++
Sbjct: 563 ---------------------GVFPEHKY---EIVKKLQERKHIVGMTGDGVNDAPALKK 598
Query: 869 ADIGVGI-SGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIA 925
ADIG+ + + + +SDI + + + +L ++R+ + Y I
Sbjct: 599 ADIGIAVADATDAARG--ASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITIR 655
Query: 926 FGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQ 985
F F + L ++ + S P
Sbjct: 656 IVFGFMLIALIWEFDFSAF-----MVLIIAILNDGTIMTISKDRVKPSPT-----PD--- 702
Query: 986 EGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCV 1045
SW IF + V+G T+
Sbjct: 703 --------SW------------KLKEIFATGV-------------VLGGYQAIMTVIF-- 727
Query: 1046 VWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAP 1105
W + S T+ + Y+ + +++ + F+E P
Sbjct: 728 FWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVE----RP 783
Query: 1106 SFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWF 1143
L+ ++ + A F + W
Sbjct: 784 GALLMIAFLIAQLIATLIAVYANW-EFAKIRGIGWGWA 820
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 4e-06
Identities = 45/260 (17%), Positives = 72/260 (27%), Gaps = 87/260 (33%)
Query: 265 TDCIYGA----VIFTGRDTKVFQNSTGPPSKRSK--VERRMDKIIYFLFGILVLMSFIGS 318
+ C G VI TG T + + S ++ + I F + + I
Sbjct: 200 STCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEI 259
Query: 319 IFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISL-- 376
I R +DG L+L IPI++
Sbjct: 260 IVMYPIQRRKYRDG----------------------------IDNLLVLLIGGIPIAMPT 291
Query: 377 YVSIE-------------IVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTI 423
+S+ I K + +I EE+ +D +
Sbjct: 292 VLSVTMAIGSHRLSQQGAITKRMTAI-------------------------EEMAGMDVL 326
Query: 424 LSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMA----RRKGSPLEEEVTEEQEDKA 479
SDKTGTLT N + K + G +V A ++ + D
Sbjct: 327 CSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPK 386
Query: 480 SIKG---------FNFEDER 490
+ FN D+R
Sbjct: 387 EARAGIREVHFLPFNPVDKR 406
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 3e-16
Identities = 50/316 (15%), Positives = 91/316 (28%), Gaps = 110/316 (34%)
Query: 572 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKE 631
V Y +L F K++ +V S +G + KGA + + E E+ +
Sbjct: 438 SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLK-TVEEDHPIPEEVDQ 496
Query: 632 HI----NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEK 687
E+A G R+L +A + E
Sbjct: 497 AYKNKVAEFATRGFRSLGVARKR----------------------------------GEG 522
Query: 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 747
+ +LG D ++ + + + G+ + +LTGD + A RQ+
Sbjct: 523 SWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS----------RQL 572
Query: 748 IISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 807
+ + ++ L D + DG
Sbjct: 573 GLGTNIYNAERLG----------------------LGGGGDMPGSEVYDFVEAADG---- 606
Query: 808 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK------TSSTTLAIGDGAN 861
+A P+ K V +++ + T GDG N
Sbjct: 607 FA----------------------EVFPQHKYNVVEILQQRGYLVAMT-------GDGVN 637
Query: 862 DVGMLQEADIGVGISG 877
D L++AD G+ + G
Sbjct: 638 DAPSLKKADTGIAVEG 653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 7e-05
Identities = 35/321 (10%), Positives = 75/321 (23%), Gaps = 113/321 (35%)
Query: 264 NTDCIYGA----VIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFL-FGILVLMSF 315
++ G + TG +T + ++ I L ++ +
Sbjct: 248 SSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLI 307
Query: 316 IGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPIS 375
+ + L + +P+
Sbjct: 308 V--WVSSFYRSNPIVQI----------------------------LEFTLAITIIGVPVG 337
Query: 376 L--YVSIE-------------IVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
L V+ IV+ L +I E L V
Sbjct: 338 LPAVVTTTMAVGAAYLAKKKAIVQKLSAI-------------------------ESLAGV 372
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMAR------RKGSPLE----EE 470
+ + SDKTGTLT N + G ++ + ++ +
Sbjct: 373 EILCSDKTGTLTKNKLSLHDPYTVA---GVDPEDLMLTACLAASRKKKGIDAIDKAFLKS 429
Query: 471 VTEEQEDKASIKG--------FNFEDERIM------NGSWVNEPHADVIQK--FLRLLAI 514
+ K+ + F+ ++++ G + K L +L
Sbjct: 430 LKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERI------TCVKGAPLFVLKT 483
Query: 515 CHTALPEVDEENGKISYEAES 535
P +E + +
Sbjct: 484 VEEDHPIPEEVDQAYKNKVAE 504
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 6e-16
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 32/131 (24%)
Query: 572 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFER---LAENG--REFE 626
+ + ++ + F R+RMSV+V L+ KGA + + NG +
Sbjct: 51 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLD 110
Query: 627 EQTKEHI----NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIA 682
+ I + GLR + +A + L +E +
Sbjct: 111 DIMLRKIKRVTDTLNRQGLRVVAVATKYLPARE-----------------------GDYQ 147
Query: 683 EKIEKNLILLG 693
E +LIL G
Sbjct: 148 RADESDLILEG 158
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 67.6 bits (164), Expect = 2e-11
Identities = 74/543 (13%), Positives = 162/543 (29%), Gaps = 155/543 (28%)
Query: 359 LHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELG 418
+ F T Y Y +I+ + + F+ + + D P + EE
Sbjct: 7 MDFETGEHQYQYK---------DILSVFEDAFV-DNFDCKDVQ-DMPKSILSK---EE-- 50
Query: 419 QVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSP-LEEEVTEEQED 477
+D I+ K + + S + V EV R L + EQ
Sbjct: 51 -IDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLR-----INYKFLMSPIKTEQRQ 104
Query: 478 KASI-KGFNFEDERIMNGSWVNEPHADV--IQKFLRLLAICHTALPEVDEEN-------- 526
+ + + + + +R+ N + V + +V +Q +L+L AL E+
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAKY-NVSRLQPYLKL----RQALLELRPAKNVLIDGVL 159
Query: 527 --GKISYEAESPDEAAFVIAARELGFEFY----ERTQTSISV--------HELDPVTGTK 572
GK + ++ F+ + + + +V +++DP ++
Sbjct: 160 GSGKTWVALDVCLSYKVQ---CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 573 VERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEH 632
+ S ++ + + R + + E LL+L +V Q +
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL----LNV--------------QNAKA 258
Query: 633 INEYADAGLRTLILAYRE------LDEKEYKQFNEE-----FTEAK------NSVSADRE 675
N + + + L+ R L + + T + + +
Sbjct: 259 WNAF-NLSCKILLTT-RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316
Query: 676 ELAEEIAEKIEKNLI-LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 734
+L E + ++ +++G D + DK+ T I
Sbjct: 317 DLPRE-VLTTNPRRLSIIAE-----SIRDG-LATWDNWKH-------VNCDKLTTIIESS 362
Query: 735 FAC---SLLRQGMRQVII---SSETPESKTLE------KSEDKSAAAAALKASVLHQLIR 782
+ R+ ++ + S+ P L D V+++L +
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPT-ILLSLIWFDVIKSDVM--------VVVNKLHK 413
Query: 783 GKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVT 842
L++ K T ++ ++LEL + AL
Sbjct: 414 -YSLVEK------------QPKESTISIP----SIYLEL---------KVKLENEYALHR 447
Query: 843 RLV 845
+V
Sbjct: 448 SIV 450
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 7e-09
Identities = 96/687 (13%), Positives = 174/687 (25%), Gaps = 234/687 (34%)
Query: 27 DHSLIGGPGFSRV-----VHCNDPES----FEASVL--NYSGNYVRTTKYTLATFFPKAL 75
DH ++ S + E F VL NY +
Sbjct: 52 DHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM 111
Query: 76 FEQFR-RVANVYFLICAILSFTPLS-----PYSAVSNVL------PLVVVIGATM---GK 120
+ + R R+ N F + PY + L V++ G + GK
Sbjct: 112 YIEQRDRLYND------NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG--VLGSGK 163
Query: 121 EVLEDWRRKKQDIEV-NNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLS 179
+ ++V + KV+ F W L + E L +L
Sbjct: 164 TWVA--------LDVCLSYKVQCKMDFKIF----W--LNLK---NCNSPE---TVLEML- 202
Query: 180 SSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVG 239
+ + Y N D +SN+ +R A L
Sbjct: 203 ----QKLLYQIDPNW--------TSRSDHSSNI-----------KLRIHSIQAELRRL-- 237
Query: 240 SLELEEQQYPLTPQQLL-LRDSKLRNTDCI----YGA-VIFTGRDTKVFQNSTGPPSKRS 293
L+ + Y LL L + ++N ++ T R +V + +
Sbjct: 238 ---LKSKPYE---NCLLVLLN--VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289
Query: 294 KVERRMD------------KIIYFLFGIL---------VLMSFIGSIFFGIATREDLQDG 332
++ K + L +S I E ++DG
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA---------ESIRDG 340
Query: 333 KMKRW--YLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEI----VKIL 386
W + + D + + L+ L + + + I
Sbjct: 341 LA-TWDNWKHVN-----CDKLTTIIESSLNVLEPAEYRKM------FDRLSVFPPSAHIP 388
Query: 387 QSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGT 446
+ L + + + K ++ V L + E SI
Sbjct: 389 TIL-----LSLIWFDVIK----------SDVMVVVNKLHKY-SLVEKQPKES-TISI--- 428
Query: 447 SYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQ 506
+ E+ + E++ ++ H ++
Sbjct: 429 -PS-----------------IYLELKVKLENEYAL-------------------HRSIVD 451
Query: 507 KFLRLLAICHTALPEVDEEN---GKISY---EAESPDEAAFVIAARE--LGFEFYERTQT 558
+ L + I + E P+ R L F F E+
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF---RMVFLDFRFLEQK-- 506
Query: 559 SISVHELDPVTGTKVERSYSLLNVL-EFSSSRKRMSVIVRSEE-------------GTLL 604
I H T S S+LN L + + + E L
Sbjct: 507 -I-RH-----DSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENL 559
Query: 605 LLSKGADSVMFERLAENGREFEEQTKE 631
+ SK D + +AE+ FEE K+
Sbjct: 560 ICSKYTDLLRIALMAEDEAIFEEAHKQ 586
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.2 bits (137), Expect = 3e-08
Identities = 71/495 (14%), Positives = 136/495 (27%), Gaps = 158/495 (31%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKG----DHSLIGGPGFS----RVVHCNDPESFEASV 52
+ G GKT + + F + +CN PE+ +
Sbjct: 158 VLG---------------SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202
Query: 53 LN----YSGNYVRTTKYTLATFFP--------KALF--EQFRR----VANVY-------F 87
N+ + ++ + L + + + NV F
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF 262
Query: 88 LI-CAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGE 146
+ C IL T + + V++ L AT L+ E +
Sbjct: 263 NLSCKIL-LT--TRFKQVTDFL-----SAATTTHISLDHHSMTLTPDE----------VK 304
Query: 147 GAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAIC---YVETTNLDGETNLKLK 203
K+ D + D+ E P L +++ S + + + N D KL
Sbjct: 305 SLL--LKYLDCRPQDL-PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD-----KLT 356
Query: 204 QALDATSNMHEDSNFQN-FK--AIIRCED---PNANLYTFVGSLELEEQQY---PLTPQQ 254
++++ N+ E + ++ F ++ P L + + L
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFP-PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS 415
Query: 255 LLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRM--------------- 299
L+ + K +T I ++ + R +
Sbjct: 416 LVEKQPK-ESTISIPS----------IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL 464
Query: 300 -----DKIIYF----------------LFGILVL-MSFIGS--IFFGIATR------EDL 329
D+ Y LF ++ L F+ A L
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTL 524
Query: 330 QDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSI 389
Q K + Y+ +D Y+ V A+L FL + S Y + L+
Sbjct: 525 QQLKFYKPYICDNDPK--YE---RLVNAILDFL---PKIEENLICSKYTDL-----LRIA 571
Query: 390 FINQDLHMYYEETDK 404
+ +D +EE K
Sbjct: 572 LMAED-EAIFEEAHK 585
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 838 KALVTRLVKTKTS-STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-SDIAIAQFR 895
K V +L+K K + IGDGA D+ AD +G G Q V + I F
Sbjct: 158 KGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFV 217
Query: 896 FLERLL 901
L L
Sbjct: 218 ELLGEL 223
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 853 TLAIGDGANDVGMLQEADIGV 873
+A GD ND ML EA G+
Sbjct: 148 VIAAGDSYNDTTMLSEAHAGI 168
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 853 TLAIGDGANDVGMLQEADIGVG 874
T+A+GDGAND+ M ++A + +
Sbjct: 162 TVAVGDGANDISMFKKAGLKIA 183
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 853 TLAIGDGANDVGMLQEADIGVG 874
TL +GDGAND+ M + A I +
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIA 182
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 5e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 853 TLAIGDGANDVGMLQEADIGVG 874
T+A+GDGAND+ M+ A +GV
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVA 285
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 853 TLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLL 901
+A GDGAND+ ML+ A G+ ++ I + E LL
Sbjct: 265 IIACGDGANDLPMLEHAGTGIAWKAKPVVRE--KIHHQI-NYHGFELLL 310
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 6e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 853 TLAIGDGANDVGMLQEADIGVG 874
T+A+GDGAND+ ML A +G+
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIA 363
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 8e-05
Identities = 8/51 (15%), Positives = 22/51 (43%)
Query: 838 KALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 888
L + + + +GD ND+ + + D+ V + + + V+++
Sbjct: 182 ARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDPPEGVLATP 232
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 2e-04
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 21/79 (26%)
Query: 610 ADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNS 669
AD + E E+ R++ E+ ++ + +ELD E +AK
Sbjct: 77 ADRLTQE--PESIRKWREEQRKRL---------------QELDAASKVMEQEWREKAKK- 118
Query: 670 VSADREELAEEIAEKIEKN 688
D EE + +E++EKN
Sbjct: 119 ---DLEEWNQRQSEQVEKN 134
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 3e-04
Identities = 11/75 (14%), Positives = 31/75 (41%), Gaps = 16/75 (21%)
Query: 616 ERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRE 675
+RL E + ++ E A ++L+E ++ +E+ + K + +R
Sbjct: 96 KRLQELDAA-SKVMEQEWREKAK----------KDLEEW-NQRQSEQVEKNKIN---NRI 140
Query: 676 ELAEEIAEKIEKNLI 690
+ ++ + ++I
Sbjct: 141 A-DKAFYQQPDADII 154
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 41.5 bits (96), Expect = 4e-04
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Query: 752 ETPESKTLEKS----EDKSAAAAALKASV 776
E K L+ S D SA A A+KA++
Sbjct: 18 EKQALKKLQASLKLYADDSAPALAIKATM 46
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Query: 808 YALEDDVKDLFLELAIGCASVICCRSSPKQ-KALVTRLVKTKTSSTTLAIGDGANDVGML 866
Y + ++ + + C + K V + + IGD DV
Sbjct: 121 YCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQ-YIIMIGDSVTDVEAA 179
Query: 867 QEADIG 872
+ +D+
Sbjct: 180 KLSDLC 185
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1189 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.84 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.86 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.84 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.81 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.74 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.71 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.49 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.02 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.79 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.77 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.76 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.71 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.71 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.69 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.68 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.66 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.65 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.63 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.6 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.59 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.52 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.52 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.47 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.45 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.45 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.38 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.36 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.35 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.35 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.3 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.3 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.25 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.25 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.22 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.21 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.18 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.17 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.16 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.13 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.1 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.09 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.06 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.05 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.02 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.02 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.01 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 97.99 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 97.99 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 97.97 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.97 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 97.97 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 97.96 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.95 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.89 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.88 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.83 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.79 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.79 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.73 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.72 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 97.71 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.69 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.69 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.68 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.68 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.65 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.62 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.62 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.59 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.56 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.55 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.54 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.54 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.53 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.52 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.52 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.51 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.44 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.43 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.43 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.41 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.4 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.39 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.37 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.35 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.33 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.33 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.32 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.31 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.29 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.29 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.26 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.2 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.14 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.14 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.04 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.03 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.02 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.01 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 96.98 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 96.94 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 96.91 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 96.91 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 96.88 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.88 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 96.84 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 96.83 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.73 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.57 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.38 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.37 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.23 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.04 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 95.95 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 95.89 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 95.85 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 95.85 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 95.74 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.59 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 95.5 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 95.4 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 95.37 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.08 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 95.0 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.0 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.0 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 94.79 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 94.73 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 94.64 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 94.45 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 94.18 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 94.11 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 94.04 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 93.92 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 93.66 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 93.33 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 93.14 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 91.95 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 91.46 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 89.97 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 83.86 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 82.97 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 81.51 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 81.21 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 80.76 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-106 Score=1044.86 Aligned_cols=882 Identities=17% Similarity=0.163 Sum_probs=681.7
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcccc--CC-------CCCCccchhhhhhHHHHHh
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP--LS-------PYSAVSNVLPLVVVIGATM 118 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~--~~-------~~~~~~~~~~l~~vl~~s~ 118 (1189)
.++|+++||+|.++..+.+.+. +.+++||.++++++++++++++++. +. ..+.+...+++++++++++
T Consensus 78 a~~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 154 (1034)
T 3ixz_A 78 AAELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTG 154 (1034)
T ss_pred HHHHHHhhCCCCCCCCCCCCHH---HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHH
Confidence 3678999999999988875543 8899999999999999999988763 11 1234566788889999999
Q ss_pred hHHHHHHHHHhhhhHHHh---cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCC
Q 001017 119 GKEVLEDWRRKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLD 195 (1189)
Q Consensus 119 i~~~~~d~~~~~~~~~~n---~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~Lt 195 (1189)
+.++++++|++++.+.++ +++++|+ |||++++|++++|+|||||.|++||.||||++|+++++ +.||||+||
T Consensus 155 ~~~~~qe~ka~~al~~L~~l~~~~a~Vi-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LT 229 (1034)
T 3ixz_A 155 CFGYYQEFKSTNIIASFKNLVPQQATVI-RDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLT 229 (1034)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEE-ECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecccC
Confidence 999999999999877665 5789999 99999999999999999999999999999999999986 899999999
Q ss_pred CCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEe
Q 001017 196 GETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFT 275 (1189)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~t 275 (1189)
|||.|+.|.+....... .......|+||.+.+|. ++|+|++|
T Consensus 230 GES~pv~K~~~~~~~~~-----------------~~~~n~~f~GT~v~~G~---------------------~~~vVv~t 271 (1034)
T 3ixz_A 230 GESEPQTRSPECTHESP-----------------LETRNIAFFSTMCLEGT---------------------AQGLVVNT 271 (1034)
T ss_pred CCCCCeeccCCCccccc-----------------cccccceecceeEEeec---------------------ceEEEEee
Confidence 99999999886432100 01112456677776666 99999999
Q ss_pred ccccce---eccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchh
Q 001017 276 GRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKR 352 (1189)
Q Consensus 276 G~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (1189)
|.+|.+ ......++.+++|+++.++++..++..+.++++++.++++.++..
T Consensus 272 G~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------------------- 325 (1034)
T 3ixz_A 272 GDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGY-------------------------- 325 (1034)
T ss_pred hhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------
Confidence 999954 455566778899999999999999988888888777766543211
Q ss_pred hHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCcccc
Q 001017 353 AAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (1189)
Q Consensus 353 ~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT 432 (1189)
.+...+..++++++.+||++||++++++.++++.+| +++++++|+++++|+||++++||||||||||
T Consensus 326 ---~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT 392 (1034)
T 3ixz_A 326 ---TFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLT 392 (1034)
T ss_pred ---hHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHH----------hhCCeEecChHHHHhhcCCcEEEcCCCCCcc
Confidence 123367788999999999999999999999999998 8899999999999999999999999999999
Q ss_pred ccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHH
Q 001017 433 CNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 512 (1189)
Q Consensus 433 ~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 512 (1189)
+|+|+|.++++++..+.....+. ..+. ...+.....+.++.++
T Consensus 393 ~n~m~v~~~~~~~~~~~~~~~~~-------------------------~~~~------------~~~~~~~~~~~l~~~~ 435 (1034)
T 3ixz_A 393 QNRMTVSHLWFDNHIHSADTTED-------------------------QSGQ------------TFDQSSETWRALCRVL 435 (1034)
T ss_pred cCeEEEEEEEECCccccccCccc-------------------------cccc------------ccCcCCHHHHHHHHHH
Confidence 99999999998887654321100 0000 0011234567889999
Q ss_pred hhhcceeccccCCCC--cEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCc
Q 001017 513 AICHTALPEVDEENG--KISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 590 (1189)
Q Consensus 513 alC~~~~~~~~~~~~--~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rk 590 (1189)
++||++....+++.. .-....++|.|.|+++++...+.... +.+..|+++..+||+|+||
T Consensus 436 ~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~------------------~~~~~~~~~~~~pF~s~rk 497 (1034)
T 3ixz_A 436 TLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAM------------------GYRERFPKVCEIPFNSTNK 497 (1034)
T ss_pred HHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChH------------------HHHHhCcceEEeeecCCCc
Confidence 999998765332211 11234689999999999988764321 1236788899999999999
Q ss_pred eEEEEEEeCC---CeEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHH
Q 001017 591 RMSVIVRSEE---GTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQ 658 (1189)
Q Consensus 591 rmsviv~~~~---~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~ 658 (1189)
||+++++.++ +++++|+|||||.|+++|... +++.++.+.+.+++++.+|+|||++|+|.++++++.+
T Consensus 498 ~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~ 577 (1034)
T 3ixz_A 498 FQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPP 577 (1034)
T ss_pred eEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhccc
Confidence 9999887643 689999999999999999742 3456778889999999999999999999999876654
Q ss_pred HHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcC
Q 001017 659 FNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACS 738 (1189)
Q Consensus 659 ~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~g 738 (1189)
+.... . +..+.+|+||+|+|+++++||+|++++++|++|+++||+|||+|||+..||.++|++||
T Consensus 578 ~~~~~----------~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lg 642 (1034)
T 3ixz_A 578 GYAFD----------V-----EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVG 642 (1034)
T ss_pred ccccc----------h-----hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcC
Confidence 32211 1 11245689999999999999999999999999999999999999999999999999999
Q ss_pred cccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHH
Q 001017 739 LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 818 (1189)
Q Consensus 739 i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~ 818 (1189)
|..++...+ .. ...+...... ..........+++|..+....++++.+
T Consensus 643 i~~~~~~~i---------------------~~-----~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~~~l~~-- 690 (1034)
T 3ixz_A 643 IISEGSETV---------------------ED-----IAARLRVPVD----QVNRKDARACVINGMQLKDMDPSELVE-- 690 (1034)
T ss_pred CCCCCchHH---------------------HH-----HHHhhCccch----hccccccceeEEecHhhhhCCHHHHHH--
Confidence 976432100 00 0000000000 001223456789999988766555443
Q ss_pred HHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--
Q 001017 819 LELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF-- 896 (1189)
Q Consensus 819 ~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~-- 896 (1189)
....++..+|||++|+||.++|+.+|+ .|+.|+|+|||.||++||++||+||||+++..+.|+++||+++.++++
T Consensus 691 --~~~~~~~~v~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~g 767 (1034)
T 3ixz_A 691 --ALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFAS 767 (1034)
T ss_pred --HHHhCCceEEEecCHHHHHHHHHHHHH-cCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchH
Confidence 334556679999999999999999998 799999999999999999999999999756666799999999998776
Q ss_pred hHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHH
Q 001017 897 LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARF 976 (1189)
Q Consensus 897 l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~ 976 (1189)
+..+ +.|||++|.|+++++.|.+++|+..+++.+++.++. ...++.++|++|+|++++.+|+++++.+. +.++.
T Consensus 768 I~~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~palal~~e~--~~~~~ 841 (1034)
T 3ixz_A 768 IVTG-VEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS---VPLPLGCITILFIELCTDIFPSVSLAYEK--AESDI 841 (1034)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHHHHHHHhhcCC--CChhh
Confidence 5555 789999999999999999999999999999888774 33568999999999999999999999753 33444
Q ss_pred HhhCccchhccc-cccccchhhhhhh-hhhhHHHHHHHHHHHHHhhcccccc------------C-C--------Cce--
Q 001017 977 CLKFPLLYQEGV-QNILFSWTRILGW-ALNGVANAAIIFFFCIHAMKQQAFR------------K-G--------GEV-- 1031 (1189)
Q Consensus 977 ~~~~P~ly~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~--------g~~-- 1031 (1189)
+.+.|+ .+ ++.+++.+.++.. +..|++++++.|+.+++.+....+. . . |..
T Consensus 842 m~~~Pr----~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1034)
T 3ixz_A 842 MHLRPR----NPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWT 917 (1034)
T ss_pred hhCCCC----CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccc
Confidence 445554 44 4678888876654 4458888877776665543221110 0 0 000
Q ss_pred -----eehhhhhhHHHHHHHHHHHHHHHH-hccc---c--hhhHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHH
Q 001017 1032 -----IGLEILGTTMYTCVVWVVNCQMAL-SVTY---F--TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEA 1100 (1189)
Q Consensus 1032 -----~~~~~~~~~~f~~~v~~~n~~~~l-~~~~---~--t~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~ 1100 (1189)
.......|++|+++++.+.+..+. .+.. | .++.+..+|+++++.+++++++.++|+. +. +|+.
T Consensus 918 ~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~-~~-----~f~~ 991 (1034)
T 3ixz_A 918 FGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGM-PN-----IFNF 991 (1034)
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhH-HH-----HhcC
Confidence 001124688888888776666543 2221 2 2357888899999999999999998853 33 6778
Q ss_pred hccChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 001017 1101 CAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPL 1135 (1189)
Q Consensus 1101 ~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~~~P~ 1135 (1189)
.+.++..|+.+++++++.++.+++.|+++|.+.++
T Consensus 992 ~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~~ 1026 (1034)
T 3ixz_A 992 MPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGS 1026 (1034)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 88999999999999999999999999999877543
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-105 Score=1043.41 Aligned_cols=903 Identities=19% Similarity=0.214 Sum_probs=666.5
Q ss_pred chhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcccc-CCCC-----CCccchhhhhhHHHHHhhH
Q 001017 47 SFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-LSPY-----SAVSNVLPLVVVIGATMGK 120 (1189)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~-~~~~-----~~~~~~~~l~~vl~~s~i~ 120 (1189)
+.++|+++||+|.++.+++..+. +.|++||+++++++|++++++++++ +.+. ..|...+.++++++++++.
T Consensus 29 e~~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 105 (995)
T 3ar4_A 29 QVKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIV 105 (995)
T ss_dssp HHHHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCccCCCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHH
Confidence 34678889999999998764432 8999999999999999999999886 3321 1333445556667778888
Q ss_pred HHHHHHHHhhhhHHH---hcceEEEEecCCe--EEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCC
Q 001017 121 EVLEDWRRKKQDIEV---NNRKVKVHCGEGA--FDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLD 195 (1189)
Q Consensus 121 ~~~~d~~~~~~~~~~---n~~~~~v~~r~g~--~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~Lt 195 (1189)
..+++++..++.+.+ .+.+++|+ |||+ .++|++++|+|||||.|++||.|||||+|++++. +.|+||||+||
T Consensus 106 ~~~qe~~a~~al~~L~~~~~~~a~V~-R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LT 182 (995)
T 3ar4_A 106 GVWQERNAENAIEALKEYEPEMGKVY-RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILT 182 (995)
T ss_dssp HHHHHHHCCCHHHHHGGGSCSEEEEE-BTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCeEEEE-eCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEee--ceEEEEccccc
Confidence 888888877765544 47889999 9887 6999999999999999999999999999976532 23999999999
Q ss_pred CCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEe
Q 001017 196 GETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFT 275 (1189)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~t 275 (1189)
|||.|+.|.+++... | ...+.+.+|++++||.+.+ |+++|+|++|
T Consensus 183 GES~pv~K~~~~~~~-------------------~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~t 227 (995)
T 3ar4_A 183 GESVSVIKHTEPVPD-------------------P---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATT 227 (995)
T ss_dssp CCCSCEEECCSCCCC-------------------T---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEEC
T ss_pred CCCcceeccccccCC-------------------c---------------ccCcccccceEecCCEEEc-ceEEEEEEEc
Confidence 999999999864321 0 1123456788888888886 6799999999
Q ss_pred cccccee---ccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchh
Q 001017 276 GRDTKVF---QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKR 352 (1189)
Q Consensus 276 G~~Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (1189)
|.+|+++ +....++.+++++|+.+|++..+++++++++|++.++++..+....... ..|+
T Consensus 228 G~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------- 290 (995)
T 3ar4_A 228 GVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHG---GSWI-------------- 290 (995)
T ss_dssp GGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSS---SCHH--------------
T ss_pred CcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---chHH--------------
Confidence 9999764 4455677889999999999999999988888877765543211100000 0121
Q ss_pred hHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCcccc
Q 001017 353 AAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (1189)
Q Consensus 353 ~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT 432 (1189)
......|..++++++.+|||+||++++++.++++.++ +++++++|+++++|+||++++||||||||||
T Consensus 291 --~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT 358 (995)
T 3ar4_A 291 --RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLT 358 (995)
T ss_dssp --HHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTB
T ss_pred --HHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHh----------ccCCcEeccchhhhhhcCceEEEecCCCCcc
Confidence 1223356678889999999999999999999999988 7899999999999999999999999999999
Q ss_pred ccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHH
Q 001017 433 CNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 512 (1189)
Q Consensus 433 ~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 512 (1189)
+|+|+|.++++.+..++......+. ...+... .+. .....++........+...+++.++
T Consensus 359 ~n~m~v~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------~p~----~~~~~~~~~~~~~~~~~~~~l~~~~ 418 (995)
T 3ar4_A 359 TNQMSVCKMFIIDKVDGDFCSLNEF---SITGSTY-------------APE----GEVLKNDKPIRSGQFDGLVELATIC 418 (995)
T ss_dssp CCCCEEEEEEEEEEEETTEEEEEEE---EECCSSS-------------SSC----CCEEETTEECCGGGCHHHHHHHHHH
T ss_pred cCceEEEEEEecCcccCccccccee---eccCCCc-------------CCc----cccccccccccccccHHHHHHHHHH
Confidence 9999999998765443210000000 0000000 000 0000000001112334567889999
Q ss_pred hhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceE
Q 001017 513 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRM 592 (1189)
Q Consensus 513 alC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 592 (1189)
++||++.++.++..+.+ ...+||+|.|++.++++.|+ +.. ....+...+............|++++.+||+|+||||
T Consensus 419 alc~~~~~~~~~~~~~~-~~~g~p~E~Al~~~a~~~g~-~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m 495 (995)
T 3ar4_A 419 ALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNV-FNT-EVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSM 495 (995)
T ss_dssp HHSCCCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCT-TCC-CCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEE
T ss_pred HHcCCCcccccCCCCce-eecCCccHHHHHHHHHHcCC-ccc-cccccccccccccchhhhhhhCceEEEeecCCCCCee
Confidence 99999876544333322 23589999999999999887 211 1000000000000000123579999999999999999
Q ss_pred EEEEEeCCC-----eEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHH--HhccCeEEEEEEEecCHHHH
Q 001017 593 SVIVRSEEG-----TLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEY--ADAGLRTLILAYRELDEKEY 656 (1189)
Q Consensus 593 sviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~--a~~Glr~l~~a~r~l~~~e~ 656 (1189)
||+++.++| +..+|+|||||.|+++|... +++.++.+.+++++| +++|+|||++|||+++.++.
T Consensus 496 svi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~ 575 (995)
T 3ar4_A 496 SVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE 575 (995)
T ss_dssp EEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG
T ss_pred EEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccc
Confidence 999998766 68999999999999999642 234567788899999 99999999999999864210
Q ss_pred HHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 001017 657 KQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 736 (1189)
Q Consensus 657 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 736 (1189)
...+ .+ ....+.+|+|++|+|+++++|++|++++++|+.|+++||++||+|||+..||.++|++
T Consensus 576 ----------~~~~-~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~ 639 (995)
T 3ar4_A 576 ----------EMVL-DD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR 639 (995)
T ss_dssp ----------GCCT-TC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred ----------cccc-cc-----chhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH
Confidence 0001 01 0134678999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHH
Q 001017 737 CSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKD 816 (1189)
Q Consensus 737 ~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~ 816 (1189)
|||...+... . ..+++|+.+..+.++++.+
T Consensus 640 lgi~~~~~~i--------~------------------------------------------~~~~~g~~~~~l~~~~~~~ 669 (995)
T 3ar4_A 640 IGIFGENEEV--------A------------------------------------------DRAYTGREFDDLPLAEQRE 669 (995)
T ss_dssp HTSSCTTCCC--------T------------------------------------------TTEEEHHHHHTSCHHHHHH
T ss_pred cCcCCCCCcc--------c------------------------------------------ceEEEchhhhhCCHHHHHH
Confidence 9997543110 0 0156676666554444433
Q ss_pred HHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--c
Q 001017 817 LFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--F 894 (1189)
Q Consensus 817 ~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f 894 (1189)
.+. +..+|||++|+||.++|+.+|+ .|+.|+|+|||.||++||++|||||||+ +....|+++||+++.+ |
T Consensus 670 ~~~------~~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~ 741 (995)
T 3ar4_A 670 ACR------RACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNF 741 (995)
T ss_dssp HHH------HCCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCH
T ss_pred HHh------hCcEEEEeCHHHHHHHHHHHHH-CCCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCH
Confidence 332 3569999999999999999999 6999999999999999999999999995 4334489999999987 5
Q ss_pred hhhHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCCh
Q 001017 895 RFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSA 974 (1189)
Q Consensus 895 ~~l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~ 974 (1189)
..+..+ +.|||++|+|+++++.|.+++|+..+++.+++.++. + ..++.++|++|+|++++.+|+++++++++ .+
T Consensus 742 ~~i~~~-i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g-~--~~pl~~~qil~~nl~~d~~p~l~l~~~~~--~~ 815 (995)
T 3ar4_A 742 STIVAA-VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG-L--PEALIPVQLLWVNLVTDGLPATALGFNPP--DL 815 (995)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-C--CCSSCHHHHHHHHHTTTHHHHHHHTTCCC--CT
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C--cchHHHHHHHHHHHHHHHHHHHhhccCCC--Ch
Confidence 558887 899999999999999999999999988888887763 2 24688999999999999999999998754 34
Q ss_pred HHHhhCccchhccccccccchhhhhhhhhhhHHHHHHHHHHHHHhhc--ccc--cc-----------CCCcee-------
Q 001017 975 RFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMK--QQA--FR-----------KGGEVI------- 1032 (1189)
Q Consensus 975 ~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~-----------~~g~~~------- 1032 (1189)
+.+.++|+ .+++.+++++.++.|++.|+++++++++.+++.+. ... .. .++..+
T Consensus 816 ~~m~~~P~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (995)
T 3ar4_A 816 DIMDRPPR----SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEI 891 (995)
T ss_dssp TGGGSCCC----CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCG
T ss_pred hHHhCCCC----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccccccccccccccccc
Confidence 55556665 56678999999999999999999887654433221 100 00 000000
Q ss_pred -ehhhhhhHHHHHHHHHHHHHHHHh-ccc---c--hhhHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccCh
Q 001017 1033 -GLEILGTTMYTCVVWVVNCQMALS-VTY---F--TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAP 1105 (1189)
Q Consensus 1033 -~~~~~~~~~f~~~v~~~n~~~~l~-~~~---~--t~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 1105 (1189)
......|++|+++++++.++.+.. +.. | ..+.+..+++++++.+++++++.++|.. +. +|+..+.++
T Consensus 892 ~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~-~~-----~f~~~~l~~ 965 (995)
T 3ar4_A 892 FEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPL-PM-----IFKLKALDL 965 (995)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHH-HH-----HTTCCCCCH
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHH-HH-----hhccCCCCH
Confidence 112357888998888877776532 111 1 2345666777777777777777777732 22 566778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001017 1106 SFWLITLLVLMSSLLPYFTYSAIQMRF 1132 (1189)
Q Consensus 1106 ~~wl~~ll~~~~~l~~~~~~k~~~~~~ 1132 (1189)
.+|+.+++++++.++.+++.|+++|.|
T Consensus 966 ~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 966 TQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999998865
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-105 Score=1035.88 Aligned_cols=879 Identities=18% Similarity=0.193 Sum_probs=675.3
Q ss_pred hhhcccCCCCceEecCCC-cchhhhHHHHHHHHHHHHHHHHHHHHHhccccC--C---C----CCCccchhhhhhHHHHH
Q 001017 48 FEASVLNYSGNYVRTTKY-TLATFFPKALFEQFRRVANVYFLICAILSFTPL--S---P----YSAVSNVLPLVVVIGAT 117 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~--~---~----~~~~~~~~~l~~vl~~s 117 (1189)
.++|+++||+|.++.++. ++| +.+++||.++++++++++++++++.+ . . .+.+...++++++++++
T Consensus 73 ~~~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~ 148 (1028)
T 2zxe_A 73 AKEILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVT 148 (1028)
T ss_dssp HHHHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHH
Confidence 367889999999998864 444 78999999999999999999988641 1 0 12345567788899999
Q ss_pred hhHHHHHHHHHhhhhHHHh---cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCC
Q 001017 118 MGKEVLEDWRRKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNL 194 (1189)
Q Consensus 118 ~i~~~~~d~~~~~~~~~~n---~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~L 194 (1189)
++.++++++|++++.+.+. +.+++|+ |||++++|++++|+|||||.|++||.|||||+|++|++ |+||||+|
T Consensus 149 ~~~~~~qe~ka~~~~~~L~~l~~~~a~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~L 223 (1028)
T 2zxe_A 149 GCFSYYQEAKSSRIMDSFKNMVPQQALVI-RDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSL 223 (1028)
T ss_dssp HHHHHHHTCCCCCHHHHHHTTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeEEE-ECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCcc
Confidence 9999999998888876554 6899999 99999999999999999999999999999999999975 99999999
Q ss_pred CCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEE
Q 001017 195 DGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIF 274 (1189)
Q Consensus 195 tGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~ 274 (1189)
||||.|+.|.+++.. ..|++.+|++++||.+.+ |+++|+|++
T Consensus 224 TGES~pv~K~~~~~~-------------------------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~ 265 (1028)
T 2zxe_A 224 TGESEPQTRSPEFSS-------------------------------------ENPLETRNIAFFSTNCVE-GTARGVVVY 265 (1028)
T ss_dssp HSCCSCEECCSSCCC-------------------------------------SSTTTCSSEECTTCEEEE-EEEEEEEEE
T ss_pred CCCCcceecccCCCC-------------------------------------CCcccccceEEeCceEEc-ceEEEEEEE
Confidence 999999999886432 014566788888888886 679999999
Q ss_pred eccccce---eccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCch
Q 001017 275 TGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPK 351 (1189)
Q Consensus 275 tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1189)
||.+|++ +++...++.+++++++.+++++.+++.+.+++|++.+++..+ ... .|+
T Consensus 266 tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~--------~~~------------- 323 (1028)
T 2zxe_A 266 TGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI-LGY--------SWL------------- 323 (1028)
T ss_dssp CGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTC--------CHH-------------
T ss_pred eccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccC--------cHH-------------
Confidence 9999965 445566788899999999999999999999888887766432 210 221
Q ss_pred hhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccc
Q 001017 352 RAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTL 431 (1189)
Q Consensus 352 ~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTL 431 (1189)
..+..++.+++.+||++||++++++.++++.+| +++++++|+++++|+||++++|||||||||
T Consensus 324 -------~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTL 386 (1028)
T 2zxe_A 324 -------EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTL 386 (1028)
T ss_dssp -------HHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCC
T ss_pred -------HHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH----------hhCCceeccchHhhhhcCceEEeccCCCCC
Confidence 245666778888999999999999999999998 889999999999999999999999999999
Q ss_pred cccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHH
Q 001017 432 TCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRL 511 (1189)
Q Consensus 432 T~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 511 (1189)
|+|+|+|.++++++..|.....+ . ..+.. .+......+.++.+
T Consensus 387 T~n~m~v~~~~~~~~~~~~~~~~-----------~--------------~~~~~------------~~~~~~~~~~l~~~ 429 (1028)
T 2zxe_A 387 TQNRMTVAHMWFDNQIHEADTTE-----------N--------------QSGAA------------FDKTSATWSALSRI 429 (1028)
T ss_dssp BCSSCEEEEEEETTEEEECCCCT-----------T--------------CCSCC------------CCSSCHHHHHHHHH
T ss_pred CCCeEEEEEEEECCeeeeccCCC-----------C--------------ccccc------------cccCCHHHHHHHHH
Confidence 99999999999988765321100 0 00000 01122345678899
Q ss_pred HhhhcceeccccCCCCc--EEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCC
Q 001017 512 LAICHTALPEVDEENGK--ISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSR 589 (1189)
Q Consensus 512 lalC~~~~~~~~~~~~~--~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~r 589 (1189)
+++||++..+.+++... ..+..+||+|.||++++++.|.... +.+..|++++.+||+|+|
T Consensus 430 ~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~------------------~~~~~~~~~~~~pF~s~r 491 (1028)
T 2zxe_A 430 AALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQ------------------GMRDRNPKIVEIPFNSTN 491 (1028)
T ss_dssp HHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHH------------------HHHHHSCEEEEECCCTTT
T ss_pred HHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHH------------------HHHHhCceEEEeccCccc
Confidence 99999987754321110 1123589999999999987632110 112467889999999999
Q ss_pred ceEEEEEEeC---CCeEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHH
Q 001017 590 KRMSVIVRSE---EGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 657 (1189)
Q Consensus 590 krmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~ 657 (1189)
|||+++++.+ ++++++|+|||||.|+++|... +++.++.+.+++++++++|+|||++|+|+++++++.
T Consensus 492 k~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~ 571 (1028)
T 2zxe_A 492 KYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYN 571 (1028)
T ss_dssp CEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSC
T ss_pred ceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccc
Confidence 9999999974 5788999999999999999642 234567888999999999999999999999765432
Q ss_pred HHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001017 658 QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (1189)
Q Consensus 658 ~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 737 (1189)
++. . .+++ ..+.+|+|++|+|+++++||+|++++++|++|+++||++||+|||+.+||.++|++|
T Consensus 572 ~~~--------~--~~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~l 636 (1028)
T 2zxe_A 572 EGY--------P--FDAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV 636 (1028)
T ss_dssp TTC--------C--CCTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred ccc--------c--cchh-----hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHc
Confidence 110 0 0010 012357899999999999999999999999999999999999999999999999999
Q ss_pred CcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHH
Q 001017 738 SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDL 817 (1189)
Q Consensus 738 gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~ 817 (1189)
||..++...+ . . ...+... .+... ........+++|..+..+.++++.
T Consensus 637 gi~~~~~~~i------------~------~--------~~~~~~~---~~~~~-~~~~~~~~vi~G~~l~~~~~~~l~-- 684 (1028)
T 2zxe_A 637 GIISEGNETI------------E------D--------IAARLNI---PIGQV-NPRDAKACVVHGSDLKDLSTEVLD-- 684 (1028)
T ss_dssp TSSCTTCCCH------------H------H--------HHHHTTC---CGGGS-CGGGCCEEEEEHHHHTTCCHHHHH--
T ss_pred CCCCCCchhH------------H------H--------HHhhcCc---chhhc-cccccceEEEEcHHhhhCCHHHHH--
Confidence 9975443210 0 0 0000000 00000 011234678999999876654443
Q ss_pred HHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--ch
Q 001017 818 FLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FR 895 (1189)
Q Consensus 818 ~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~ 895 (1189)
++...++.++|||++|+||..+|+.+|+ .|++|+|+|||.||++||++|||||||+.+....|+++||+++.+ |+
T Consensus 685 --~~~~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~ 761 (1028)
T 2zxe_A 685 --DILHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFA 761 (1028)
T ss_dssp --HHHHHCSEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTH
T ss_pred --HHHhhCCcEEEEEcCHHHHHHHHHHHHh-CCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHH
Confidence 3444566789999999999999999998 789999999999999999999999999633444489999999987 55
Q ss_pred hhHHHHHHhhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChH
Q 001017 896 FLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSAR 975 (1189)
Q Consensus 896 ~l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~ 975 (1189)
.+.++ +.|||++|+|+++++.|.+++|+..+++.+++.++. ...++++++++|+|++++.+|+++++... +.++
T Consensus 762 ~I~~~-i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~---~~~~l~~~qil~inl~~d~~pa~al~~e~--~~~~ 835 (1028)
T 2zxe_A 762 SIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGN---VPLPLGTVTILCIDLGTDMVPAISLAYEQ--AESD 835 (1028)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHC---CCCSSCHHHHHHHHTTTTHHHHHHGGGCC--CSSC
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---ccchhHHHHHHHHHHHHHHHHHHHhccCc--cchh
Confidence 58888 899999999999999999999999988888887764 23458999999999999999999998643 3344
Q ss_pred HHhhCccchhccccccccchhhhhh-hhhhhHHHHHHHHHHHHHhhcc-cc------------cc--------CCCceee
Q 001017 976 FCLKFPLLYQEGVQNILFSWTRILG-WALNGVANAAIIFFFCIHAMKQ-QA------------FR--------KGGEVIG 1033 (1189)
Q Consensus 976 ~~~~~P~ly~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~------------~~--------~~g~~~~ 1033 (1189)
.+.+.|+ .++.+++++++.++. |+..|++++++.|+.+++.+.. +. +. ..|....
T Consensus 836 ~m~~~Pr---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1028)
T 2zxe_A 836 IMKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWT 912 (1028)
T ss_dssp GGGSCCC---CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEEC
T ss_pred hhccCCC---CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccc
Confidence 4555564 223348999988766 6788999999888766553321 10 00 0111110
Q ss_pred -------hhhhhhHHHHHHHHHHHHHHHH-hcccchh----hHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHh
Q 001017 1034 -------LEILGTTMYTCVVWVVNCQMAL-SVTYFTY----IQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEAC 1101 (1189)
Q Consensus 1034 -------~~~~~~~~f~~~v~~~n~~~~l-~~~~~t~----~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~ 1101 (1189)
.....|++|+++++.+.+..+. +++..++ +.+..+++++++.+++++++.++|+. +. +|+..
T Consensus 913 ~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~-~~-----~f~~~ 986 (1028)
T 2zxe_A 913 YEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGT-DV-----ALRMY 986 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTH-HH-----HTCCC
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhH-Hh-----hhcCC
Confidence 1246789999999888777653 3333322 34667888888888888888888853 22 56677
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001017 1102 APAPSFWLITLLVLMSSLLPYFTYSAIQMRF 1132 (1189)
Q Consensus 1102 ~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~~ 1132 (1189)
++++..|+.++.++++.++.+++.|++.|.+
T Consensus 987 ~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 987 PLKPSWWFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp CCCGGGGGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 8899999999999999999999999987765
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-98 Score=940.78 Aligned_cols=774 Identities=17% Similarity=0.169 Sum_probs=588.9
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccchhhhhhHHHHHhhHHHHHHHH
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWR 127 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~~s~i~~~~~d~~ 127 (1189)
.++|+++||+|.++.+++++| +.|++||..+++++++++++++++ .+.|...+.++++++++++.+++++++
T Consensus 93 a~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~----~g~~~~~~~i~~vv~i~~~i~~~qe~~ 164 (920)
T 1mhs_A 93 VVQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAG----LEDWVDFGVICGLLLLNAVVGFVQEFQ 164 (920)
T ss_dssp HHHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTT----CSCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH----HHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888999999999998877 678899999999999999999988 556666677778888999999999999
Q ss_pred HhhhhHHHh---cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceecc
Q 001017 128 RKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQ 204 (1189)
Q Consensus 128 ~~~~~~~~n---~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~ 204 (1189)
++++.+.++ +.+++|+ |||++++|++++|+|||||.|++||.|||||+|++|++. +.||||+|||||.|+.|.
T Consensus 165 a~~a~~~L~~l~~~~a~V~-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~---l~VDES~LTGES~PV~K~ 240 (920)
T 1mhs_A 165 AGSIVDELKKTLALKAVVL-RDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAF---LQVDQSALTGESLAVDKH 240 (920)
T ss_dssp HHHHHHTTTTCCCSSCEEE-CSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSC---CEEBCTTTSSCCCCEECC
T ss_pred HHHHHHHhhccCCCEEEEE-ECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCce---eeeeccccCCCCcceEec
Confidence 998877765 5789999 999999999999999999999999999999999999711 699999999999999998
Q ss_pred cccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccceecc
Q 001017 205 ALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQN 284 (1189)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~~~ 284 (1189)
+++. .|+||++.+|. ++++|++||.+|++++.
T Consensus 241 ~gd~---------------------------v~sGT~v~~G~---------------------~~~~V~~tG~~T~~g~I 272 (920)
T 1mhs_A 241 KGDQ---------------------------VFASSAVKRGE---------------------AFVVITATGDNTFVGRA 272 (920)
T ss_dssp SSCE---------------------------ECSCBCCSCCC---------------------EEEEEEECSTTCSTTTT
T ss_pred CCCe---------------------------eecCceEecce---------------------EEEEEEEeCCcCHHHHH
Confidence 8643 37787777776 99999999999977654
Q ss_pred ---CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHHHH
Q 001017 285 ---STGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHF 361 (1189)
Q Consensus 285 ---~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (1189)
...++.+++++++.++++..+++++.++++++.++.+.+ .. . . +...+
T Consensus 273 ~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~-~~-~-------~--------------------~~~~l 323 (920)
T 1mhs_A 273 AALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFY-RS-N-------P--------------------IVQIL 323 (920)
T ss_dssp TSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-TT-C-------C--------------------HHHHH
T ss_pred HHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC-C-------c--------------------HHHHH
Confidence 445667889999999999998887777766655433211 00 0 1 12366
Q ss_pred HHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEEEEE
Q 001017 362 LTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKC 441 (1189)
Q Consensus 362 ~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~ 441 (1189)
..++++++.+|||+||++++++.+.++.++ +++++++|+++.+|+||++++||||||||||+|+|++.++
T Consensus 324 ~~av~llV~aiP~aLp~~vti~la~g~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~ 393 (920)
T 1mhs_A 324 EFTLAITIIGVPVGLPAVVTTTMAVGAAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDP 393 (920)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHHHHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCC
T ss_pred HHHHHHHHHhCchhHHHHHHHHHHHHHHHH----------HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEE
Confidence 778889999999999999999999999998 7899999999999999999999999999999999999876
Q ss_pred EEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcceecc
Q 001017 442 SIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPE 521 (1189)
Q Consensus 442 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~ 521 (1189)
+..+. +. + .+++.+.++|+....
T Consensus 394 ~~~~g-~~--------------------------------------------------~-----~~ll~~a~l~~~~~~- 416 (920)
T 1mhs_A 394 YTVAG-VD--------------------------------------------------P-----EDLMLTACLAASRKK- 416 (920)
T ss_dssp BCCSC-CC--------------------------------------------------C-----THHHHHHHHSCCCSS-
T ss_pred eecCC-CC--------------------------------------------------H-----HHHHHHHHHhcCCcc-
Confidence 43210 00 0 134556677765311
Q ss_pred ccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeCCC
Q 001017 522 VDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEG 601 (1189)
Q Consensus 522 ~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~ 601 (1189)
.++||.|.|+++++++.+... .....|++++.+||+|.||||+++++.++|
T Consensus 417 ----------~~~~P~e~Al~~~~~~~~~~~-------------------~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g 467 (920)
T 1mhs_A 417 ----------KGIDAIDKAFLKSLKYYPRAK-------------------SVLSKYKVLQFHPFDPVSKKVVAVVESPQG 467 (920)
T ss_dssp ----------CSCCSHHHHHHHHHHHSSSCC-------------------GGGSCCCEEEEEEEETTTTEEEEEECCSSS
T ss_pred ----------cCCChHHHHHHHHHHhcccch-------------------hhccccceeEEeeccCCCCeEEEEEEeCCC
Confidence 024999999999998765310 012457889999999999999999998888
Q ss_pred eEEEEEecCchHHHHHhhhc---chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHH
Q 001017 602 TLLLLSKGADSVMFERLAEN---GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELA 678 (1189)
Q Consensus 602 ~~~l~~KGa~~~i~~~~~~~---~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~ 678 (1189)
+.++|+||||+.|+++|... +++.++.+.+++++++.+|+|||++|+|..
T Consensus 468 ~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~--------------------------- 520 (920)
T 1mhs_A 468 ERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG--------------------------- 520 (920)
T ss_dssp SCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS---------------------------
T ss_pred cEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc---------------------------
Confidence 88999999999999999752 334567788899999999999999998731
Q ss_pred HHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccc
Q 001017 679 EEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 758 (1189)
Q Consensus 679 ~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~ 758 (1189)
|.+++|+|+++++||+|++++++|+.|+++||++||+|||+..||.+||++|||.... ++.+.
T Consensus 521 -------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~-----~~~~~----- 583 (920)
T 1mhs_A 521 -------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNI-----YNAER----- 583 (920)
T ss_dssp -------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSC-----CCSSS-----
T ss_pred -------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccc-----cCccc-----
Confidence 3789999999999999999999999999999999999999999999999999996421 00000
Q ss_pred cchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccH
Q 001017 759 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK 838 (1189)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK 838 (1189)
++++|. ..+.++++.+ ... +..+|+|++|+||
T Consensus 584 ----------------------------------------~~~~g~--~~~~~~el~~----~~~--~~~V~arv~P~~K 615 (920)
T 1mhs_A 584 ----------------------------------------LGLGGG--GDMPGSEVYD----FVE--AADGFAEVFPQHK 615 (920)
T ss_dssp ----------------------------------------SSSCBC--CCGGGGGGGT----TTT--TTSCEESCCSTHH
T ss_pred ----------------------------------------eeecCc--ccCCHHHHHH----HHh--hCeEEEEeCHHHH
Confidence 001111 0000111111 111 2349999999999
Q ss_pred HHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhhHHHHHHhhhhhhhhhhHhH
Q 001017 839 ALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMI 916 (1189)
Q Consensus 839 ~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l~~lll~~GR~~~~~i~~~i 916 (1189)
.++|+.+|+ .|+.|+|+|||.||+|||++|||||||++ ..+.|+++||+++.+ |..+..+ +.+||++|+|+++++
T Consensus 616 ~~iV~~Lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~-gtd~ak~aADiVl~~~~~~~I~~a-i~~gR~~~~ni~k~i 692 (920)
T 1mhs_A 616 YNVVEILQQ-RGYLVAMTGDGVNDAPSLKKADTGIAVEG-SSDAARSAADIVFLAPGLGAIIDA-LKTSRQIFHRMYAYV 692 (920)
T ss_dssp HHHHHHHHT-TTCCCEECCCCGGGHHHHHHSSEEEEETT-SCHHHHHSSSEEESSCCSHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-CCCeEEEEcCCcccHHHHHhCCcCccccc-ccHHHHHhcCeEEcCCCHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999998 69999999999999999999999999963 344589999999987 4458887 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhccccccccchh
Q 001017 917 CYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWT 996 (1189)
Q Consensus 917 ~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~ 996 (1189)
.|.++.|+.+....+++..+.++ + +++.+++|.|++.+. |++++++++.+++ +.|+ .++ ..+
T Consensus 693 ~~~l~~n~~~~~~~~~~~~~~~~---~-l~~~~il~~~l~~d~-~~lal~~e~~~~~-----~~P~----~~~----~~~ 754 (920)
T 1mhs_A 693 VYRIALSIHLEIFLGLWIAILNR---S-LNIELVVFIAIFADV-ATLAIAYDNAPYS-----QTPV----KWN----LPK 754 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCSC---C-CCHHHHHHHHHHHTT-HHHHCCCCCSGGG-----GSCC----CCC----SSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc---c-CCHHHHHHHHHHHHH-HhhhhcccCcccc-----cCCC----Cch----HHH
Confidence 99999999875444443333333 3 667788888888775 9999987653321 3443 111 123
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHhhccccccCCCceeehhhhhhHHHHHHHHHHHHHHHH-hccc--chhhHHHHHHHHHH
Q 001017 997 RILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMAL-SVTY--FTYIQHLFIWGGIT 1073 (1189)
Q Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~n~~~~l-~~~~--~t~~~~~~i~~si~ 1073 (1189)
.+...+..|++.++..++.+++.+... ...|.........|++|+++++...+.++. ++.. |....+..++++++
T Consensus 755 ~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~ 832 (920)
T 1mhs_A 755 LWGMSVLLGVVLAVGTWITVTTMYAQG--ENGGIVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIF 832 (920)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHTTTT--TTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--ccccccchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHH
Confidence 333344566666666554443332210 011111112246899999999988777753 2222 33234555666666
Q ss_pred HHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001017 1074 FWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMR 1131 (1189)
Q Consensus 1074 ~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~ 1131 (1189)
+..++++.+.++| . |.+.+.++..|+.+++++++.++...+.|++.+.
T Consensus 833 ~~~~~~~~~~~~~-~---------f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~ 880 (920)
T 1mhs_A 833 LVDILATCFTIWG-W---------FEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQD 880 (920)
T ss_dssp HHHHHHHHHHSSS-S---------TTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhh-h---------hccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6666666666655 2 2244667888999888888888888888875544
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-96 Score=924.67 Aligned_cols=787 Identities=17% Similarity=0.180 Sum_probs=563.5
Q ss_pred hhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhccccC---CCCCCccchhhhhhHHHHHhhHHHHH
Q 001017 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPL---SPYSAVSNVLPLVVVIGATMGKEVLE 124 (1189)
Q Consensus 48 ~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~~---~~~~~~~~~~~l~~vl~~s~i~~~~~ 124 (1189)
.++|+++||+|.++.+++++| +.|++||.+|++++++++++++++.. .....|...+.++++++++.+.++++
T Consensus 38 ~~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~q 113 (885)
T 3b8c_A 38 GEDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIE 113 (885)
T ss_dssp HHHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTTT
T ss_pred HHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 477899999999999987776 56778999999999999999998741 11124555667777788888889999
Q ss_pred HHHHhhhhHHH---hcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcce
Q 001017 125 DWRRKKQDIEV---NNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLK 201 (1189)
Q Consensus 125 d~~~~~~~~~~---n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~ 201 (1189)
+++..++.+.+ .+.+++|+ |||++++|++++|+|||||.|++||.|||||+|++|++ +.||||+|||||.|+
T Consensus 114 e~ka~~al~~L~~~~~~~a~V~-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv 188 (885)
T 3b8c_A 114 ENNAGNAAAALMAGLAPKTKVL-RDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPV 188 (885)
T ss_dssp TTTTTTHHHHTTTSCSCCCCCC-CSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCC
T ss_pred HHHHHHHHHHHhccCCCeEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcce
Confidence 99888877655 46789999 99999999999999999999999999999999999985 689999999999999
Q ss_pred ecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccce
Q 001017 202 LKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV 281 (1189)
Q Consensus 202 ~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~ 281 (1189)
.|.+++.. |+||.+.+|. ++++|++||.+|.+
T Consensus 189 ~K~~g~~v---------------------------~~GT~v~~G~---------------------~~~~V~~tG~~T~~ 220 (885)
T 3b8c_A 189 TKHPGQEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTFF 220 (885)
T ss_dssp CBSSCCCC---------------------------CSCCCCCSCC---------------------CCCBCCSCTTTTTS
T ss_pred EecCCCcc---------------------------ccCeEEeeeE---------------------EEEEEEEcCcccHH
Confidence 99876432 6777776666 99999999999976
Q ss_pred eccCC--CCCCCCcHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHH
Q 001017 282 FQNST--GPPSKRSKVERRMDKIIYFLFG-ILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAV 358 (1189)
Q Consensus 282 ~~~~~--~~~~k~s~l~~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (1189)
++... ....+++++|+.++++..+++. +.+.++++.++++.+ .. . .|.
T Consensus 221 g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~-~-------~~~-------------------- 271 (885)
T 3b8c_A 221 GKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI-QR-R-------KYR-------------------- 271 (885)
T ss_dssp TTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTT-TC-S-------CST--------------------
T ss_pred HHHHHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cc-C-------cHH--------------------
Confidence 54322 1246789999999999876433 222233222211111 00 0 121
Q ss_pred HHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCCccccccceEE
Q 001017 359 LHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEF 438 (1189)
Q Consensus 359 ~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~ 438 (1189)
..+..++++++.+|||+||++++++.++++.++ +++++++|+++.+|+||++|+||||||||||+|+|+|
T Consensus 272 ~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v 341 (885)
T 3b8c_A 272 DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSV 341 (885)
T ss_dssp THHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEE
Confidence 157788999999999999999999999999988 8999999999999999999999999999999999998
Q ss_pred EEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcce
Q 001017 439 IKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTA 518 (1189)
Q Consensus 439 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~ 518 (1189)
.++.+. .++.+. ..++++...++|+..
T Consensus 342 ~~~~~~--~~~~~~---------------------------------------------------~~~~ll~~aa~~~~~ 368 (885)
T 3b8c_A 342 DKNLVE--VFCKGV---------------------------------------------------EKDQVLLFAAMASRV 368 (885)
T ss_dssp CSCCCC--SSCSST---------------------------------------------------THHHHHHHHHHHCCS
T ss_pred EEEEEe--ccCCCC---------------------------------------------------CHHHHHHHHHHHhCC
Confidence 632210 010000 013456777888753
Q ss_pred eccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEe
Q 001017 519 LPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRS 598 (1189)
Q Consensus 519 ~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~ 598 (1189)
. ++||.|.|+++++.+.. . ....+++++.+||+|.||||+++++.
T Consensus 369 ~-------------~~~p~~~Al~~~~~~~~-----------------~-----~~~~~~~~~~~pF~s~~k~~sv~~~~ 413 (885)
T 3b8c_A 369 E-------------NQDAIDAAMVGMLADPK-----------------E-----ARAGIREVHFLPFNPVDKRTALTYID 413 (885)
T ss_dssp S-------------SCCSHHHHHHHTTCCTT-----------------C-----CCCSSCCBCCCCCCTTTCCCCCBBCS
T ss_pred C-------------CCCchHHHHHHHhhchh-----------------h-----HhhcCceeecccCCcccceEEEEEEe
Confidence 1 37999999998764210 0 12456788899999999999999988
Q ss_pred CCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHH
Q 001017 599 EEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELA 678 (1189)
Q Consensus 599 ~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~ 678 (1189)
.+|+.++|+||||+.|+++|... ++.++.+.+++++++++|+|++++|+|++++++.
T Consensus 414 ~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~---------------------- 470 (885)
T 3b8c_A 414 GSGNWHRVSKGAPEQILELAKAS-NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTK---------------------- 470 (885)
T ss_dssp SSSCBCBCCCCSGGGTSSSSCCC-STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSS----------------------
T ss_pred cCCcEEEEEeCCHHHHHHhccCc-hhhHHHHHHHHHHHHhCCCeEEEEEEeccccccc----------------------
Confidence 78888899999999999999642 2345567888999999999999999998865320
Q ss_pred HHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccc
Q 001017 679 EEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 758 (1189)
Q Consensus 679 ~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~ 758 (1189)
+..|+|++|+|+++++||+|++++++|+.|+++||++||+|||+..||.++|+++||..+.. ...
T Consensus 471 ----~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~-----~~~------ 535 (885)
T 3b8c_A 471 ----ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----PSS------ 535 (885)
T ss_dssp ----SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS-----TTS------
T ss_pred ----cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccC-----Ccc------
Confidence 23568999999999999999999999999999999999999999999999999999964210 000
Q ss_pred cchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhh-HHHHHHHHHHHhccceeEEEeCCccc
Q 001017 759 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALE-DDVKDLFLELAIGCASVICCRSSPKQ 837 (1189)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~-~~~~~~~~~~~~~~~~vv~~r~sP~q 837 (1189)
+++|.+++..+. .++.+. .. +..+|+|++|+|
T Consensus 536 -----------------------------------------~l~g~~~~~~~~~~~l~~~----~~--~~~v~arv~P~~ 568 (885)
T 3b8c_A 536 -----------------------------------------ALLGTHKDANLASIPVEEL----IE--KADGFAGVFPEH 568 (885)
T ss_dssp -----------------------------------------SCCBGGGGTTSCCSCHHHH----HH--TSCCEECCCHHH
T ss_pred -----------------------------------------eeeccccccccchhHHHHH----Hh--hCcEEEEECHHH
Confidence 112222211010 111111 11 234999999999
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHHHHHhhhhhhhhhhHh
Q 001017 838 KALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSM 915 (1189)
Q Consensus 838 K~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~lll~~GR~~~~~i~~~ 915 (1189)
|.++|+.+|+ .|+.|+|+|||.||+|||++|||||||+ +..+.|+++||+++.++++ +..+ +.+||.+|+|++++
T Consensus 569 K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~a-i~~gR~~~~ni~~~ 645 (885)
T 3b8c_A 569 KYEIVKKLQE-RKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISA-VLTSRAIFQRMKNY 645 (885)
T ss_dssp HHHHHHHHHH-TTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHH-HHTHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHH-HHHHHHHHHHHHHH
Confidence 9999999998 7999999999999999999999999996 3344588999999998555 6677 89999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccchhccccccccch
Q 001017 916 ICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSW 995 (1189)
Q Consensus 916 i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~ 995 (1189)
+.|.+..|+..++..++..+ ++. .++++++++|+|++.+..+ +.++....++ |+ .++...+ .
T Consensus 646 i~~~l~~n~~~~~~~~~~~~--~~~--~~l~p~~il~i~l~~d~~~-l~l~~~~~~~--------~~----~p~~~~~-~ 707 (885)
T 3b8c_A 646 TIYAVSITIRIVFGFMLIAL--IWE--FDFSAFMVLIIAILNDGTI-MTISKDRVKP--------SP----TPDSWKL-K 707 (885)
T ss_dssp HHHHHHHTTTTTSTTHHHHS--SCS--SCSCHHHHHHHHHHHHTTT-CCCCCCCCCC--------SS----CCCSTTT-T
T ss_pred HHHHHHHHHHHHHHHHHHHH--ccC--cCcCHHHHHHHHHHHHHHH-HhhcccccCc--------cc----CCcchhH-H
Confidence 99999999875554444433 222 3478999999999998765 6666532211 11 1222222 4
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHhhccccccC-CCce-e--ehhhhhhHHHHHHHHHHHHHHHHhc--ccchhhHHHHH-
Q 001017 996 TRILGWALNGVANAAIIFFFCIHAMKQQAFRK-GGEV-I--GLEILGTTMYTCVVWVVNCQMALSV--TYFTYIQHLFI- 1068 (1189)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~-~--~~~~~~~~~f~~~v~~~n~~~~l~~--~~~t~~~~~~i- 1068 (1189)
..+..+++.|++++++.++++++.+....+.. .|.. . ......+++|...+++..+. .+.+ ..|+|+.+...
T Consensus 708 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~Rs~~~~~~~~~~~~ 786 (885)
T 3b8c_A 708 EIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQAL-IFVTRSRSWSFVERPGAL 786 (885)
T ss_dssp TTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGG-TTCSSSCTTTSTTSTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHHH-HHHhccCCCCcccCccHH
Confidence 44556677788888877655443322111110 0100 0 01123344343222222222 2333 33444333322
Q ss_pred --HHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 001017 1069 --WGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFF 1133 (1189)
Q Consensus 1069 --~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~~~~~l~~~~~~k~~~~~~~ 1133 (1189)
+..++..++.+++..+.+.. ++...+.++..|+.+++.+++.+++..+.|++.|...
T Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~ 845 (885)
T 3b8c_A 787 LMIAFLIAQLIATLIAVYANWE--------FAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYIL 845 (885)
T ss_dssp TSGGGSSTTTTTTSSSSSCCCC--------SSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHhcccc--------ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11111112222222221111 1224567788898888888888889999998876543
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-70 Score=675.92 Aligned_cols=493 Identities=20% Similarity=0.257 Sum_probs=406.3
Q ss_pred hHHHHHhhHHHHHHHHHhhhhHHHh------cceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCc
Q 001017 112 VVIGATMGKEVLEDWRRKKQDIEVN------NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEA 185 (1189)
Q Consensus 112 ~vl~~s~i~~~~~d~~~~~~~~~~n------~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g 185 (1189)
+++++..+.+++|.+.++|+.+.++ +.++++++|||++++|++++|+|||+|+|++||.|||||+|++|+
T Consensus 193 ~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~---- 268 (736)
T 3rfu_A 193 VITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGR---- 268 (736)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECc----
Confidence 4444555677788888777655443 678888845999999999999999999999999999999999998
Q ss_pred eEEEEecCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecC
Q 001017 186 ICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNT 265 (1189)
Q Consensus 186 ~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 265 (1189)
++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 269 -~~VDES~LTGES~Pv~K~~gd~v---------------------------~~Gt~~~~G~------------------- 301 (736)
T 3rfu_A 269 -SFVDESMVTGEPIPVAKEASAKV---------------------------IGATINQTGS------------------- 301 (736)
T ss_dssp -EEEECSSSTTCSSCEEECTTCEE---------------------------CTTCEEESCC-------------------
T ss_pred -eEeeecccCCccccEEeccCCcC---------------------------CCceEeccce-------------------
Confidence 89999999999999999998754 8888888887
Q ss_pred CeEEEEEEEecccc---ceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCC
Q 001017 266 DCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPD 342 (1189)
Q Consensus 266 ~~~~gvVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1189)
+++.|++||.+| ++.+....++.+++++|+.+|++..++++++++++++++++|.++.... .|
T Consensus 302 --~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~-------~~----- 367 (736)
T 3rfu_A 302 --FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP-------AL----- 367 (736)
T ss_dssp --CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS-------ST-----
T ss_pred --EEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-------hH-----
Confidence 899999999999 4555566677788999999999999999999999999988876654211 12
Q ss_pred CCCCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeE
Q 001017 343 DTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDT 422 (1189)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~ 422 (1189)
...+..++++++.+|||+|+++++++...+..++ +++++++|+++.+|+||++|+
T Consensus 368 ---------------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~alE~l~~v~~ 422 (736)
T 3rfu_A 368 ---------------SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG----------AQSGVLIKNAEALERMEKVNT 422 (736)
T ss_dssp ---------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH----------HHTTEEESCHHHHHHHTSCCE
T ss_pred ---------------HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH----------hhcceeechHHHHHHhcCCCE
Confidence 1267889999999999999999999999999988 789999999999999999999
Q ss_pred EEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCch
Q 001017 423 ILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHA 502 (1189)
Q Consensus 423 i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 502 (1189)
||||||||||+|+|++.++..++.. +
T Consensus 423 i~fDKTGTLT~g~~~v~~i~~~~~~------~------------------------------------------------ 448 (736)
T 3rfu_A 423 LVVDKTGTLTEGHPKLTRIVTDDFV------E------------------------------------------------ 448 (736)
T ss_dssp EEECCBTTTBCSSCEEEEEEESSSC------H------------------------------------------------
T ss_pred EEEeCCCCCcCCceEEEEEEecCCC------H------------------------------------------------
Confidence 9999999999999999998733211 0
Q ss_pred HHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeee
Q 001017 503 DVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNV 582 (1189)
Q Consensus 503 ~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~ 582 (1189)
.+++...+.+ ++.++||.+.|+++++++.|+.+. ..
T Consensus 449 ---~~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~~~---------------------------~~ 484 (736)
T 3rfu_A 449 ---DNALALAAAL--------------EHQSEHPLANAIVHAAKEKGLSLG---------------------------SV 484 (736)
T ss_dssp ---HHHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCCCC---------------------------CC
T ss_pred ---HHHHHHHHHH--------------hhcCCChHHHHHHHHHHhcCCCcc---------------------------Cc
Confidence 1122222211 112579999999999998775331 12
Q ss_pred ecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHH
Q 001017 583 LEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEE 662 (1189)
Q Consensus 583 ~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~ 662 (1189)
.+|++.+++.. ... -+|+. +.+|+++.+.+.... .+...+.+++++.+|+|++++|
T Consensus 485 ~~f~~~~g~gv-~~~-~~g~~--~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~vl~va--------------- 540 (736)
T 3rfu_A 485 EAFEAPTGKGV-VGQ-VDGHH--VAIGNARLMQEHGGD-----NAPLFEKADELRGKGASVMFMA--------------- 540 (736)
T ss_dssp SCCCCCTTTEE-EEC-SSSSC--EEEESHHHHHHHCCC-----CHHHHHHHHHHHHTTCEEEEEE---------------
T ss_pred ccccccCCceE-EEE-ECCEE--EEEcCHHHHHHcCCC-----hhHHHHHHHHHHhcCCeEEEEE---------------
Confidence 35666655432 222 24432 456999877654321 2345677889999999999999
Q ss_pred HHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccC
Q 001017 663 FTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 742 (1189)
Q Consensus 663 ~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~ 742 (1189)
.|.+++|+++++|++|++++++|+.|+++||+++|+|||+..+|..+|+++||..
T Consensus 541 ------------------------~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~- 595 (736)
T 3rfu_A 541 ------------------------VDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK- 595 (736)
T ss_dssp ------------------------ETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC-
T ss_pred ------------------------ECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE-
Confidence 5678999999999999999999999999999999999999999999999999832
Q ss_pred CceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHH
Q 001017 743 GMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA 822 (1189)
Q Consensus 743 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~ 822 (1189)
T Consensus 596 -------------------------------------------------------------------------------- 595 (736)
T 3rfu_A 596 -------------------------------------------------------------------------------- 595 (736)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhhHHH
Q 001017 823 IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERL 900 (1189)
Q Consensus 823 ~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l~~l 900 (1189)
++++++|++|.++|+.+++ .++.|+|+|||.||++||++|||||+|+ +..+.|+++||+++.+ ++-+..+
T Consensus 596 ------v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~a 667 (736)
T 3rfu_A 596 ------VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKA 667 (736)
T ss_dssp ------EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHH
T ss_pred ------EEEecCHHHHHHHHHHHHh-cCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHH
Confidence 8999999999999999998 7899999999999999999999999995 3444599999999976 4447777
Q ss_pred HHHhhhhhhhhhhHhHHHHHHHHHHHHHHH
Q 001017 901 LLVHGHWCYRRISSMICYFFYKNIAFGFTL 930 (1189)
Q Consensus 901 ll~~GR~~~~~i~~~i~~~~~kni~~~~~~ 930 (1189)
+.+||..++++++++.|.|.+|++.+.+.
T Consensus 668 -i~~sr~t~~~i~qnl~~a~~yN~~~iplA 696 (736)
T 3rfu_A 668 -RRLSESTMSNIRQNLFFAFIYNVLGVPLA 696 (736)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999998865444
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-68 Score=660.91 Aligned_cols=485 Identities=20% Similarity=0.255 Sum_probs=396.6
Q ss_pred HHHHhhHHHHHHHHHhhhhH------HHhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceE
Q 001017 114 IGATMGKEVLEDWRRKKQDI------EVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAIC 187 (1189)
Q Consensus 114 l~~s~i~~~~~d~~~~~~~~------~~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~ 187 (1189)
+++..+.+++|++.++|+.+ ++.+++++|+ |||++++|++++|+|||+|.|++||.|||||++++|+ |
T Consensus 103 ~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~-----~ 176 (645)
T 3j08_A 103 LAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-----S 176 (645)
T ss_dssp HHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-----E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECc-----E
Confidence 33345677788888776533 3347889999 9999999999999999999999999999999999998 8
Q ss_pred EEEecCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCe
Q 001017 188 YVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDC 267 (1189)
Q Consensus 188 ~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~ 267 (1189)
+||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 177 ~VdeS~LTGES~Pv~K~~g~~v---------------------------~~Gt~~~~g~--------------------- 208 (645)
T 3j08_A 177 YVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV--------------------- 208 (645)
T ss_dssp EEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC---------------------
T ss_pred EEEcccccCCCCceecCCCCEe---------------------------eccEEEecCc---------------------
Confidence 9999999999999999887644 7777777666
Q ss_pred EEEEEEEecccc---ceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCC
Q 001017 268 IYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDT 344 (1189)
Q Consensus 268 ~~gvVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1189)
++++|++||.+| ++.+....++.+++++++.+|++..++++++++++++++++|.++... +|..
T Consensus 209 ~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~~~----- 275 (645)
T 3j08_A 209 LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PLLF----- 275 (645)
T ss_dssp EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSC--------SCCC-----
T ss_pred EEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cHHH-----
Confidence 999999999999 556677788889999999999999999999999988887765433211 1211
Q ss_pred CCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEE
Q 001017 345 TAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTIL 424 (1189)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~ 424 (1189)
.+..++++++.+|||+|+++++++...+..++ +++++++|+++.+|+||++|+||
T Consensus 276 ---------------~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~ 330 (645)
T 3j08_A 276 ---------------AFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVI 330 (645)
T ss_dssp ---------------TTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTCCCCSSTTHHHHGGGCCEEE
T ss_pred ---------------HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HHCCeEecCchHHHHhhCCCEEE
Confidence 45667888899999999999999999999988 78999999999999999999999
Q ss_pred eCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCchHH
Q 001017 425 SDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADV 504 (1189)
Q Consensus 425 ~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 504 (1189)
||||||||+|+|++.++...+..
T Consensus 331 fDKTGTLT~~~~~v~~~~~~~~~--------------------------------------------------------- 353 (645)
T 3j08_A 331 FDKTGTLTKGKPEVTDLVPLNGD--------------------------------------------------------- 353 (645)
T ss_dssp EEGGGTSSSSCCEEEEEEESSSC---------------------------------------------------------
T ss_pred EcCcccccCCCeEEEEEEeCCCC---------------------------------------------------------
Confidence 99999999999999999865311
Q ss_pred HHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeec
Q 001017 505 IQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLE 584 (1189)
Q Consensus 505 ~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~ 584 (1189)
.++++...+.|+. .++||++.|+++++++.|+.....++ +. ...|++...
T Consensus 354 ~~~~l~~aa~~e~--------------~s~hPla~Aiv~~a~~~g~~~~~~~~--~~-----~~~g~g~~~--------- 403 (645)
T 3j08_A 354 ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPEK--VE-----VIAGEGVVA--------- 403 (645)
T ss_dssp HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCCC--CE-----EETTTEEEE---------
T ss_pred HHHHHHHHHHHhh--------------cCCChhHHHHHHHHHhcCCCcCCccc--eE-----EecCCceEE---------
Confidence 0134444444432 25799999999999998875422110 00 000111000
Q ss_pred CCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHH
Q 001017 585 FSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFT 664 (1189)
Q Consensus 585 F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~ 664 (1189)
..+.+|+++.+.+. +.+..+.+.+.+++++.+|+|++++|
T Consensus 404 -------------------~~v~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~l~va----------------- 443 (645)
T 3j08_A 404 -------------------DGILVGNKRLMEDF----GVAVSNEVELALEKLEREAKTAVIVA----------------- 443 (645)
T ss_dssp -------------------TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHTTTCCCEEEE-----------------
T ss_pred -------------------EEEEECCHHHHHhc----CCCccHHHHHHHHHHHhcCCeEEEEE-----------------
Confidence 12456887666432 22334567788889999999999999
Q ss_pred HHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCc
Q 001017 665 EAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM 744 (1189)
Q Consensus 665 ~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~ 744 (1189)
.|++++|+++++|++|++++++|+.|+++||+++|+|||+..+|..+|+++|+..
T Consensus 444 ----------------------~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~--- 498 (645)
T 3j08_A 444 ----------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--- 498 (645)
T ss_dssp ----------------------ETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---
T ss_pred ----------------------ECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE---
Confidence 5778999999999999999999999999999999999999999999999999831
Q ss_pred eEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhc
Q 001017 745 RQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG 824 (1189)
Q Consensus 745 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~ 824 (1189)
T Consensus 499 -------------------------------------------------------------------------------- 498 (645)
T 3j08_A 499 -------------------------------------------------------------------------------- 498 (645)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhhHHHHH
Q 001017 825 CASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLL 902 (1189)
Q Consensus 825 ~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l~~lll 902 (1189)
++++++|++|..+++.+++ . +.|+|+|||.||++||++||+||+|+ +..+.|+++||+++.+ ++.+..+ +
T Consensus 499 ----~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~-i 570 (645)
T 3j08_A 499 ----VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAA-I 570 (645)
T ss_dssp ----EECSCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHH-H
T ss_pred ----EEEeCCHHhHHHHHHHHhh-C-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHH-H
Confidence 8999999999999999998 4 89999999999999999999999996 4444599999999965 5557777 7
Q ss_pred HhhhhhhhhhhHhHHHHHHHHHHHHHHH
Q 001017 903 VHGHWCYRRISSMICYFFYKNIAFGFTL 930 (1189)
Q Consensus 903 ~~GR~~~~~i~~~i~~~~~kni~~~~~~ 930 (1189)
.+||+.++++++++.|.+++|++.+.+.
T Consensus 571 ~~~r~~~~~i~~nl~~a~~~N~~~i~la 598 (645)
T 3j08_A 571 QLSRKTMSKIKQNIFWALIYNVILIPAA 598 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999854443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-68 Score=667.97 Aligned_cols=488 Identities=20% Similarity=0.248 Sum_probs=398.5
Q ss_pred hHHHHHhhHHHHHHHHHhhhhHH------HhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCc
Q 001017 112 VVIGATMGKEVLEDWRRKKQDIE------VNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEA 185 (1189)
Q Consensus 112 ~vl~~s~i~~~~~d~~~~~~~~~------~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g 185 (1189)
+++++..+.+++|++.++|+.+. +.+.+++|+ |||++++|++++|+|||+|.|++||.|||||+|++|+
T Consensus 179 ~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~---- 253 (723)
T 3j09_A 179 LLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE---- 253 (723)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECC----
Confidence 33444456778888888776433 346789999 9999999999999999999999999999999999998
Q ss_pred eEEEEecCCCCCCcceecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecC
Q 001017 186 ICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNT 265 (1189)
Q Consensus 186 ~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt 265 (1189)
|+||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 254 -~~VdeS~LTGES~pv~K~~g~~v---------------------------~~Gt~~~~g~------------------- 286 (723)
T 3j09_A 254 -SYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV------------------- 286 (723)
T ss_dssp -EEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC-------------------
T ss_pred -eEEecccccCCCcceeecCCCee---------------------------ccceEEecCc-------------------
Confidence 89999999999999999887644 7777777666
Q ss_pred CeEEEEEEEecccc---ceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCC
Q 001017 266 DCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPD 342 (1189)
Q Consensus 266 ~~~~gvVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 342 (1189)
++++|++||.+| ++.+....++.+++++++.+|+++.++++++++++++++++|.++... +|.
T Consensus 287 --~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~~---- 352 (723)
T 3j09_A 287 --LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PLL---- 352 (723)
T ss_dssp --EEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTC--------TTC----
T ss_pred --EEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cHH----
Confidence 999999999999 556667788889999999999999999999999888887665433211 111
Q ss_pred CCCCccCchhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeE
Q 001017 343 DTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDT 422 (1189)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~ 422 (1189)
..+..++++++.+|||+|+++++++...+..++ +++++++|+++.+|+||++|+
T Consensus 353 ----------------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~ 406 (723)
T 3j09_A 353 ----------------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTA 406 (723)
T ss_dssp ----------------CSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHGGGCCE
T ss_pred ----------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH----------HHCCeEEeChHHHHHhhcCCE
Confidence 157778899999999999999999999999988 889999999999999999999
Q ss_pred EEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhhcCCCCCCCch
Q 001017 423 ILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHA 502 (1189)
Q Consensus 423 i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 502 (1189)
||||||||||+|+|++.++...+..
T Consensus 407 i~fDKTGTLT~g~~~v~~~~~~~~~------------------------------------------------------- 431 (723)
T 3j09_A 407 VIFDKTGTLTKGKPEVTDLVPLNGD------------------------------------------------------- 431 (723)
T ss_dssp EEEEHHHHTSCSCCEEEEEEESSSC-------------------------------------------------------
T ss_pred EEEcCCCccccCceEEEEEEeCCCC-------------------------------------------------------
Confidence 9999999999999999999865311
Q ss_pred HHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeee
Q 001017 503 DVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNV 582 (1189)
Q Consensus 503 ~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~ 582 (1189)
.++++...+.|.. .++||++.|+++++++.|+.+...+. +. ..+|+|...
T Consensus 432 --~~~~l~~aa~~e~--------------~s~hP~~~Ai~~~a~~~~~~~~~~~~--~~-----~~~g~g~~~------- 481 (723)
T 3j09_A 432 --ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPEK--VE-----VIAGEGVVA------- 481 (723)
T ss_dssp --HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCCC--CE-----EETTTEEEE-------
T ss_pred --HHHHHHHHHHHhc--------------cCCCchhHHHHHHHHhcCCCcCCccc--eE-----EecCCceEE-------
Confidence 0123444444422 25799999999999998875422110 00 001111100
Q ss_pred ecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHH
Q 001017 583 LEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEE 662 (1189)
Q Consensus 583 ~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~ 662 (1189)
..+.+|+++.+.+.. .+..+.+.+.+++++.+|+|++++|
T Consensus 482 ---------------------~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~va--------------- 521 (723)
T 3j09_A 482 ---------------------DGILVGNKRLMEDFG----VAVSNEVELALEKLEREAKTAVIVA--------------- 521 (723)
T ss_dssp ---------------------TTEEEECHHHHHHTT----CCCCHHHHHHHHHHHTTTCEEEEEE---------------
T ss_pred ---------------------EEEEECCHHHHHhcC----CCccHHHHHHHHHHHhcCCeEEEEE---------------
Confidence 124568877664422 2234567788899999999999999
Q ss_pred HHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccC
Q 001017 663 FTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 742 (1189)
Q Consensus 663 ~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~ 742 (1189)
.|++++|+++++|++|++++++|+.|+++||++||+|||+..+|..+|+++|+..
T Consensus 522 ------------------------~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~- 576 (723)
T 3j09_A 522 ------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL- 576 (723)
T ss_dssp ------------------------ETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-
T ss_pred ------------------------ECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE-
Confidence 5788999999999999999999999999999999999999999999999999831
Q ss_pred CceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHH
Q 001017 743 GMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA 822 (1189)
Q Consensus 743 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~ 822 (1189)
T Consensus 577 -------------------------------------------------------------------------------- 576 (723)
T 3j09_A 577 -------------------------------------------------------------------------------- 576 (723)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhhHHH
Q 001017 823 IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERL 900 (1189)
Q Consensus 823 ~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l~~l 900 (1189)
++++++|+||..+|+.+++ . +.|+|+|||.||++||++|||||+|+ +..+.|+++||+++.+ ++.+..+
T Consensus 577 ------~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~ 647 (723)
T 3j09_A 577 ------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAA 647 (723)
T ss_dssp ------EECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHH
T ss_pred ------EEccCCHHHHHHHHHHHhc-C-CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHH
Confidence 8999999999999999998 4 89999999999999999999999996 4444599999999965 5557777
Q ss_pred HHHhhhhhhhhhhHhHHHHHHHHHHHHHHHH
Q 001017 901 LLVHGHWCYRRISSMICYFFYKNIAFGFTLF 931 (1189)
Q Consensus 901 ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~ 931 (1189)
+.+||++++++++++.|.+++|++.+.+.+
T Consensus 648 -i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~ 677 (723)
T 3j09_A 648 -IQLSRKTMSKIKQNIFWALIYNVILIPAAA 677 (723)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999998554443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.9e-26 Score=251.30 Aligned_cols=137 Identities=23% Similarity=0.318 Sum_probs=118.2
Q ss_pred CceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHH
Q 001017 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSA 767 (1189)
Q Consensus 688 ~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 767 (1189)
+-.+.|.+.++|+++||+.++|+.|++.|++++|+|||+..++..+++++|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 445889999999999999999999999999999999999999999999998731
Q ss_pred HHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHh
Q 001017 768 AAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKT 847 (1189)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~ 847 (1189)
+|+.+.|+.|..+++.++.
T Consensus 178 -------------------------------------------------------------~f~~~~p~~k~~~~~~l~~ 196 (263)
T 2yj3_A 178 -------------------------------------------------------------YYSNLSPEDKVRIIEKLKQ 196 (263)
Confidence 4555569999999999987
Q ss_pred cCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccc--ccchhhHHHHHHhhhhhhhhhhH
Q 001017 848 KTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAI--AQFRFLERLLLVHGHWCYRRISS 914 (1189)
Q Consensus 848 ~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i--~~f~~l~~lll~~GR~~~~~i~~ 914 (1189)
.++.|+|||||.||++|+++||+||++.. ....+...||+++ .++..+..+ +..+|.++++++.
T Consensus 197 -~~~~~~~VGD~~~D~~aa~~Agv~va~g~-~~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 197 -NGNKVLMIGDGVNDAAALALADVSVAMGN-GVDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
Confidence 67889999999999999999999999853 3334678899999 667777777 7889999888865
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.86 E-value=9.8e-21 Score=212.55 Aligned_cols=272 Identities=24% Similarity=0.281 Sum_probs=194.6
Q ss_pred cCCcccccCcchhhhccCeeEEEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhcccccc
Q 001017 402 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASI 481 (1189)
Q Consensus 402 ~~~~i~~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1189)
.++|+++|+++.+|.|+++++|+||||||||.+.+.+..+...+. .+
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~------~~--------------------------- 60 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------DE--------------------------- 60 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS------CH---------------------------
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC------CH---------------------------
Confidence 789999999999999999999999999999999999988765431 00
Q ss_pred CCCCcCChhhhcCCCCCCCchHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeE
Q 001017 482 KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSIS 561 (1189)
Q Consensus 482 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~ 561 (1189)
.+++.. |..+ + ..+.||.+.|+.+++++.|+..... ..+.
T Consensus 61 ------------------------~~~l~~---~~~~--e---------~~s~hp~~~a~~~~~~~~g~~~~~~--~~~~ 100 (287)
T 3a1c_A 61 ------------------------RELLRL---AAIA--E---------RRSEHPIAEAIVKKALEHGIELGEP--EKVE 100 (287)
T ss_dssp ------------------------HHHHHH---HHHH--T---------TTCCSHHHHHHHHHHHHTTCCCCCC--SCEE
T ss_pred ------------------------HHHHHH---HHHH--h---------hcCCCHHHHHHHHHHHhcCCCcccc--ccce
Confidence 112222 2222 1 1257999999999999988742110 0000
Q ss_pred EEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccC
Q 001017 562 VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGL 641 (1189)
Q Consensus 562 v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Gl 641 (1189)
... |.+ +. . ..+.+|.++.+.+.. .+.++.+.+..+.+..+|.
T Consensus 101 -~~~----G~~-------------------~~----~-----~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~g~ 143 (287)
T 3a1c_A 101 -VIA----GEG-------------------VV----A-----DGILVGNKRLMEDFG----VAVSNEVELALEKLEREAK 143 (287)
T ss_dssp -EET----TTE-------------------EE----E-----TTEEEECHHHHHHTT----CCCCHHHHHHHHHHHHTTC
T ss_pred -eec----CCC-------------------eE----E-----EEEEECCHHHHHhcC----CCccHHHHHHHHHHHhCCC
Confidence 000 000 00 0 112346544432211 1111234556677888999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEE
Q 001017 642 RTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWV 721 (1189)
Q Consensus 642 r~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~m 721 (1189)
++++++ .+..++|.+..+++++||+.++|+.|+++|+++.+
T Consensus 144 ~~i~~~---------------------------------------~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i 184 (287)
T 3a1c_A 144 TAVIVA---------------------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGM 184 (287)
T ss_dssp EEEEEE---------------------------------------ETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEE
T ss_pred eEEEEE---------------------------------------ECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEE
Confidence 999988 35578999999999999999999999999999999
Q ss_pred EcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEE
Q 001017 722 LTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALII 801 (1189)
Q Consensus 722 lTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 801 (1189)
+||+....+..+.+.+|+..
T Consensus 185 ~T~~~~~~~~~~l~~~gl~~------------------------------------------------------------ 204 (287)
T 3a1c_A 185 ITGDNWRSAEAISRELNLDL------------------------------------------------------------ 204 (287)
T ss_dssp ECSSCHHHHHHHHHHHTCSE------------------------------------------------------------
T ss_pred EeCCCHHHHHHHHHHhCCce------------------------------------------------------------
Confidence 99999999999999988731
Q ss_pred cCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcch
Q 001017 802 DGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGM 881 (1189)
Q Consensus 802 ~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~ 881 (1189)
.|..+.|..|...++.+.. . ..++||||+.||++|.+.|++||++.... .
T Consensus 205 ---------------------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~-~ 254 (287)
T 3a1c_A 205 ---------------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGS-D 254 (287)
T ss_dssp ---------------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHHHHHSSEEEEECCCS-C
T ss_pred ---------------------------eeeecChHHHHHHHHHHhc-C-CeEEEEECCHHHHHHHHHCCeeEEeCCCC-H
Confidence 4555668899999999887 5 88999999999999999999999995332 2
Q ss_pred hhhhcccccc--ccchhhHHHHHHhhhhhhhhhh
Q 001017 882 QAVMSSDIAI--AQFRFLERLLLVHGHWCYRRIS 913 (1189)
Q Consensus 882 ~a~~~sD~~i--~~f~~l~~lll~~GR~~~~~i~ 913 (1189)
.++..+|+++ .++.-+..+ +..+|.++++++
T Consensus 255 ~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 255 VAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp CSSCCSSEEESSSCTHHHHHH-HHTTC-------
T ss_pred HHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhhC
Confidence 3567799999 677777776 788998888764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=8.6e-20 Score=204.04 Aligned_cols=274 Identities=24% Similarity=0.285 Sum_probs=187.7
Q ss_pred ccCcchhhhccCeeEEEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcC
Q 001017 408 ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFE 487 (1189)
Q Consensus 408 ~~~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (1189)
+|+++.+|.|++++.|+|||+||||.|+|++..+...+. .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~------~---------------------------------- 40 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH------S---------------------------------- 40 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS------C----------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC------C----------------------------------
Confidence 478899999999999999999999999999998875432 0
Q ss_pred ChhhhcCCCCCCCchHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCC
Q 001017 488 DERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 567 (1189)
Q Consensus 488 ~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~ 567 (1189)
..+++..++.+.. .+.+|...++.++++..|+.....
T Consensus 41 -----------------~~~~~~~~~~~~~--------------~s~~~~~~a~~~~~~~~g~~~~~~------------ 77 (280)
T 3skx_A 41 -----------------EDELLQIAASLEA--------------RSEHPIAAAIVEEAEKRGFGLTEV------------ 77 (280)
T ss_dssp -----------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCCC------------
T ss_pred -----------------HHHHHHHHHHhhc--------------cCCCHHHHHHHHHHHhcCCCCCCc------------
Confidence 0123333332221 146889999999999988643110
Q ss_pred CCCcceeEEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEE
Q 001017 568 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILA 647 (1189)
Q Consensus 568 ~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a 647 (1189)
..+. .++ .+.+...+ ++... ..|.++.+.+...... .....+...+.+.+.++
T Consensus 78 -------~~~~---~~~----g~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 130 (280)
T 3skx_A 78 -------EEFR---AIP----GKGVEGIV---NGRRY--MVVSPGYIRELGIKTD--------ESVEKLKQQGKTVVFIL 130 (280)
T ss_dssp -------EEEE---EET----TTEEEEEE---TTEEE--EEECHHHHHHTTCCCC--------TTHHHHHTTTCEEEEEE
T ss_pred -------ccee---ecC----CCEEEEEE---CCEEE--EEecHHHHHHcCCCch--------HHHHHHHhCCCeEEEEE
Confidence 0110 000 01111111 22222 2366555543322111 23445677888888877
Q ss_pred EEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCCh
Q 001017 648 YRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKM 727 (1189)
Q Consensus 648 ~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~ 727 (1189)
.+..++|.+.++|+++|++.++++.|++.|+++.++||+..
T Consensus 131 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~ 171 (280)
T 3skx_A 131 ---------------------------------------KNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNR 171 (280)
T ss_dssp ---------------------------------------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCH
T ss_pred ---------------------------------------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCH
Confidence 45678999999999999999999999999999999999999
Q ss_pred hhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhh
Q 001017 728 ETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 807 (1189)
Q Consensus 728 ~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 807 (1189)
..+..+.+.+|+..
T Consensus 172 ~~~~~~~~~~gl~~------------------------------------------------------------------ 185 (280)
T 3skx_A 172 FVAKWVAEELGLDD------------------------------------------------------------------ 185 (280)
T ss_dssp HHHHHHHHHHTCSE------------------------------------------------------------------
T ss_pred HHHHHHHHHcCChh------------------------------------------------------------------
Confidence 99999999998732
Q ss_pred hhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcc
Q 001017 808 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSS 887 (1189)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~s 887 (1189)
.|..+.|.+|...++-+.+ . ..++||||+.||++|++.|++||++.+. ...++..|
T Consensus 186 ---------------------~f~~~~~~~k~~~~k~~~~-~-~~~~~vGD~~nDi~~~~~Ag~~va~~~~-~~~~~~~a 241 (280)
T 3skx_A 186 ---------------------YFAEVLPHEKAEKVKEVQQ-K-YVTAMVGDGVNDAPALAQADVGIAIGAG-TDVAVETA 241 (280)
T ss_dssp ---------------------EECSCCGGGHHHHHHHHHT-T-SCEEEEECTTTTHHHHHHSSEEEECSCC-SSSCCCSS
T ss_pred ---------------------HhHhcCHHHHHHHHHHHHh-c-CCEEEEeCCchhHHHHHhCCceEEecCC-cHHHHhhC
Confidence 5667778899999998887 3 3689999999999999999999999543 33377889
Q ss_pred cccc--ccchhhHHHHHHhhhhhhhhhhHhHHHHHH
Q 001017 888 DIAI--AQFRFLERLLLVHGHWCYRRISSMICYFFY 921 (1189)
Q Consensus 888 D~~i--~~f~~l~~lll~~GR~~~~~i~~~i~~~~~ 921 (1189)
|+++ .+..-+..+ +..+|..+++++.++.|++.
T Consensus 242 ~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 242 DIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp SEECSSCCTHHHHHH-HHHHHTCCC-----------
T ss_pred CEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 9988 556667777 78899999998888877653
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-20 Score=176.22 Aligned_cols=99 Identities=21% Similarity=0.263 Sum_probs=90.4
Q ss_pred hhHHHhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceecccccccc
Q 001017 131 QDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATS 210 (1189)
Q Consensus 131 ~~~~~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~ 210 (1189)
+...+.+..++|+ |+|++++|++++|+|||+|.|++||.|||||++++|+ +.||||+||||+.|+.|.+++..
T Consensus 5 ~L~~l~p~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-----~~vdeS~LTGEs~pv~k~~g~~v- 77 (113)
T 2hc8_A 5 KLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-----SYVDESMISGEPVPVLKSKGDEV- 77 (113)
T ss_dssp HHHHHSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-----EEEECHHHHCCSSCEEECTTCEE-
T ss_pred HHhcCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-----EEEEccccCCCCccEEECCCCEE-
Confidence 3456678999999 9999999999999999999999999999999999998 89999999999999999987643
Q ss_pred cCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccceec
Q 001017 211 NMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ 283 (1189)
Q Consensus 211 ~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~~ 283 (1189)
|+||++.+|. +.++|++||.+|.+.+
T Consensus 78 --------------------------~aGt~~~~G~---------------------~~~~V~~~g~~T~~~~ 103 (113)
T 2hc8_A 78 --------------------------FGATINNTGV---------------------LKIRATRVGGETLLAQ 103 (113)
T ss_dssp --------------------------CTTCEECSSC---------------------EEEEEEECGGGSHHHH
T ss_pred --------------------------EeCCEEeece---------------------EEEEEEEecCcCHHHH
Confidence 8999999888 9999999999996543
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.7e-19 Score=167.47 Aligned_cols=97 Identities=18% Similarity=0.225 Sum_probs=86.5
Q ss_pred hHHHhcceEEEEecCCe------EEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceeccc
Q 001017 132 DIEVNNRKVKVHCGEGA------FDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQA 205 (1189)
Q Consensus 132 ~~~~n~~~~~v~~r~g~------~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~~ 205 (1189)
...+.+..++|+ |+|. ++.|+.++|+|||+|.|++||.|||||+|++|+ +.||||+|||||.|+.|.+
T Consensus 12 L~~l~p~~a~v~-r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~-----~~vdeS~LTGEs~pv~k~~ 85 (124)
T 2kij_A 12 LISLQATEATIV-TLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH-----SMVDESLITGEAMPVAKKP 85 (124)
T ss_dssp HHHTCCSEEEEE-ECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCC-----CEEECTTTTCCSSCEECCT
T ss_pred HhccCCCEEEEE-ECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEcc-----EEEEeccccCCCccEEeCC
Confidence 344568899999 7653 688999999999999999999999999999998 7999999999999999998
Q ss_pred ccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEecccccee
Q 001017 206 LDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF 282 (1189)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~ 282 (1189)
++.. |+||++.+|. +.+.|+.||.+|.+.
T Consensus 86 g~~v---------------------------~aGt~~~~G~---------------------~~~~v~~~g~~T~~~ 114 (124)
T 2kij_A 86 GSTV---------------------------IAGSINQNGS---------------------LLICATHVGADTTLS 114 (124)
T ss_dssp TEEE---------------------------CTTCEEESSC---------------------CEEEECSCTTTCHHH
T ss_pred CCEE---------------------------EcCCEEeeeE---------------------EEEEEEEecccCHHH
Confidence 7644 8999999988 999999999999654
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.2e-18 Score=175.16 Aligned_cols=140 Identities=20% Similarity=0.223 Sum_probs=108.6
Q ss_pred HHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCC
Q 001017 507 KFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFS 586 (1189)
Q Consensus 507 ~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~ 586 (1189)
+.+...++|+..... .+||.|.|+++++...+.. .....|+++..+||+
T Consensus 17 ~vl~~a~L~s~~~~~-----------~~n~~d~Ail~~~~~~~~~--------------------~~~~~~~~~~eiPFd 65 (170)
T 3gwi_A 17 RVLHSAWLNSHYQTG-----------LKNLLDTAVLEGTDEESAR--------------------SLASRWQKIDEIPFD 65 (170)
T ss_dssp HHHHHHHHHHHHCCS-----------CCCHHHHHHHHTSCHHHHH--------------------HHHHHSEEEEEECCC
T ss_pred HHHHHHHHcCCCCCC-----------CCChHHHHHHHHHHhcChh--------------------hhhhcCeEEeeEecC
Confidence 456667777643221 3699999999886542210 012568899999999
Q ss_pred CCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHH
Q 001017 587 SSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 657 (1189)
Q Consensus 587 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~ 657 (1189)
|+|||||++++.++|+.++|+|||||.|+++|... +++.++.+.+.+++|+++|+|||++|||+++.++..
T Consensus 66 s~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~ 145 (170)
T 3gwi_A 66 FERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD 145 (170)
T ss_dssp TTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC
T ss_pred cccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc
Confidence 99999999999888899999999999999999742 345678899999999999999999999999753200
Q ss_pred HHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeeccc
Q 001017 658 QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDK 700 (1189)
Q Consensus 658 ~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~ 700 (1189)
.....|+||+|+|++|+-|.
T Consensus 146 -----------------------~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 146 -----------------------YQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp -----------------------CCGGGSCSEEEEEEEEEEC-
T ss_pred -----------------------cCccccCCcEEEehhccccc
Confidence 01235899999999999885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.9e-14 Score=161.99 Aligned_cols=143 Identities=13% Similarity=0.092 Sum_probs=104.8
Q ss_pred ecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhH
Q 001017 697 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (1189)
Q Consensus 697 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1189)
..+++|||++++++.|+++|+++.|+|||...++.++|+++|+...+..+..-....
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~----------------------- 194 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDF----------------------- 194 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEE-----------------------
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEE-----------------------
Confidence 458999999999999999999999999999999999999999876543332211100
Q ss_pred HHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEE
Q 001017 777 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 856 (1189)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~i 856 (1189)
........+.+..+. .+++..|.+|...+..+++ .++.|+|+
T Consensus 195 ----------------~~~~~~~~~~~~~i~---------------------~~~k~~~~~k~~~~~~~~~-~~~~v~~v 236 (297)
T 4fe3_A 195 ----------------DENGVLKGFKGELIH---------------------VFNKHDGALKNTDYFSQLK-DNSNIILL 236 (297)
T ss_dssp ----------------CTTSBEEEECSSCCC---------------------TTCHHHHHHTCHHHHHHTT-TCCEEEEE
T ss_pred ----------------cccceeEeccccccc---------------------hhhcccHHHHHHHHHHhhc-cCCEEEEE
Confidence 001111122222111 4666778888888888877 78899999
Q ss_pred cCCCCChhhh---hhcCeeEEecC------Ccchhhhhccccccccchh--hHHH
Q 001017 857 GDGANDVGML---QEADIGVGISG------VEGMQAVMSSDIAIAQFRF--LERL 900 (1189)
Q Consensus 857 GDG~ND~~ml---~~A~vGI~i~g------~~~~~a~~~sD~~i~~f~~--l~~l 900 (1189)
|||+||+||+ ..||+||+|+- +....|++++|++|.++++ +++.
T Consensus 237 GDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~ 291 (297)
T 4fe3_A 237 GDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 291 (297)
T ss_dssp ESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred eCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHH
Confidence 9999999994 59999999851 2233478999999999766 4444
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.02 E-value=3.1e-10 Score=118.32 Aligned_cols=137 Identities=11% Similarity=0.083 Sum_probs=104.4
Q ss_pred eEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHH
Q 001017 690 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAA 769 (1189)
Q Consensus 690 ~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 769 (1189)
..++...++|.+ +|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 345555555544 9999999999999999999999999999999832
Q ss_pred HHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcC
Q 001017 770 AALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT 849 (1189)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~ 849 (1189)
+|... ..|...++.+.+..
T Consensus 88 -----------------------------------------------------------~f~~~--~~K~~~~~~~~~~~ 106 (189)
T 3mn1_A 88 -----------------------------------------------------------LFQGR--EDKLVVLDKLLAEL 106 (189)
T ss_dssp -----------------------------------------------------------EECSC--SCHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------HhcCc--CChHHHHHHHHHHc
Confidence 12111 56777776666543
Q ss_pred ---CCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc------chhhHHHHHHhhhhhhhhhhHhHHHHH
Q 001017 850 ---SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHWCYRRISSMICYFF 920 (1189)
Q Consensus 850 ---~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~------f~~l~~lll~~GR~~~~~i~~~i~~~~ 920 (1189)
.+.+++|||+.||++|++.|++|+++.+.. ..++..||+++.+ .+.+..+ +...|..++++.+.+.|.+
T Consensus 107 g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~ 184 (189)
T 3mn1_A 107 QLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAA-SFVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGH 184 (189)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC
T ss_pred CCChhHEEEECCCHHHHHHHHHCCCeEEeCCcc-HHHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhccc
Confidence 478999999999999999999999995433 3478899999987 3556666 5667889999998888876
Q ss_pred HHH
Q 001017 921 YKN 923 (1189)
Q Consensus 921 ~kn 923 (1189)
.+|
T Consensus 185 ~~~ 187 (189)
T 3mn1_A 185 HHH 187 (189)
T ss_dssp ---
T ss_pred ccc
Confidence 654
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.79 E-value=3.7e-09 Score=117.51 Aligned_cols=204 Identities=16% Similarity=0.137 Sum_probs=107.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCC---------CcccccchhhHHHHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET---------PESKTLEKSEDKSAAAA 770 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~---------~~~~~~~~~~~~~~~~~ 770 (1189)
.+-+.+.++|++|+++|++++++||+....+..+...+|+.......+..++.. .....+..+.....++.
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~~ 101 (279)
T 4dw8_A 22 EISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYEC 101 (279)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHHH
Confidence 567888999999999999999999999999999999998732222333222221 11112222222222222
Q ss_pred HHHHhHH----------------------HHHhh----hhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHH-h
Q 001017 771 ALKASVL----------------------HQLIR----GKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA-I 823 (1189)
Q Consensus 771 ~~~~~~~----------------------~~~~~----~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~-~ 823 (1189)
.....+. ..... ....+...........++.+..... +.+.+.+.... .
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~----~~~~~~l~~~~~~ 177 (279)
T 4dw8_A 102 ARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKL----IPVESELCIRLQG 177 (279)
T ss_dssp HHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHH----HHHHHHHHHHTTT
T ss_pred HHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHH----HHHHHHHHHHhcC
Confidence 1111000 00000 0000000000011112222211110 12222222211 1
Q ss_pred cccee----EEEeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 824 GCASV----ICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 824 ~~~~v----v~~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
....+ .+....|. .|+..++.+.++.| ..|++|||+.||++|++.|++||+|++. ...++.+||++..+.
T Consensus 178 ~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na-~~~~k~~A~~v~~~~ 256 (279)
T 4dw8_A 178 KINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNA-QEPVKKAADYITLTN 256 (279)
T ss_dssp TCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS-CHHHHHHCSEECCCG
T ss_pred CEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCC-cHHHHHhCCEEcCCC
Confidence 11111 12245555 79999988877533 6799999999999999999999999554 444889999998763
Q ss_pred h------hhHHHHHHhhhhh
Q 001017 895 R------FLERLLLVHGHWC 908 (1189)
Q Consensus 895 ~------~l~~lll~~GR~~ 908 (1189)
+ .+.+++..+|+..
T Consensus 257 ~e~Gv~~~i~~~~~~~~~~~ 276 (279)
T 4dw8_A 257 DEDGVAEAIERIFNVEGHHH 276 (279)
T ss_dssp GGTHHHHHHHHHC-------
T ss_pred CCcHHHHHHHHHHhcccccc
Confidence 3 2566666777653
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.77 E-value=5.7e-09 Score=108.90 Aligned_cols=96 Identities=18% Similarity=0.143 Sum_probs=76.8
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhcc
Q 001017 708 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 787 (1189)
Q Consensus 708 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1189)
.|+.|+++|+++.++||+....+..+++++|+..
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------------------------- 93 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------------------------- 93 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE----------------------------------------------
Confidence 3999999999999999999999999999999832
Q ss_pred ccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEEEcCCCCChh
Q 001017 788 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDVG 864 (1189)
Q Consensus 788 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~iGDG~ND~~ 864 (1189)
++... ..|...++.+.+. ....+++|||+.||++
T Consensus 94 -----------------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~ 130 (195)
T 3n07_A 94 -----------------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWP 130 (195)
T ss_dssp -----------------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHH
T ss_pred -----------------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHH
Confidence 22212 4566666655543 2368999999999999
Q ss_pred hhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 865 MLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 865 ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
|++.|++++++.+.. ..++..||+++..
T Consensus 131 ~~~~ag~~va~~na~-~~~~~~ad~v~~~ 158 (195)
T 3n07_A 131 VMEKVALRVCVADGH-PLLAQRANYVTHI 158 (195)
T ss_dssp HHTTSSEEEECTTSC-HHHHHHCSEECSS
T ss_pred HHHHCCCEEEECChH-HHHHHhCCEEEcC
Confidence 999999999996443 3478899999876
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=1.8e-08 Score=103.97 Aligned_cols=129 Identities=11% Similarity=0.063 Sum_probs=94.0
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHH
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 780 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1189)
+.+++.++|+.|+++|++++++||+....+..+++++|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 34456799999999999999999999999999999998732
Q ss_pred hhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCC---CeEEEEc
Q 001017 781 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIG 857 (1189)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~---~~vl~iG 857 (1189)
.+.. ...|...++.+.+..+ +.+++||
T Consensus 77 ------------------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~vG 106 (180)
T 1k1e_A 77 ------------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIG 106 (180)
T ss_dssp ------------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ------------------------------------------------eecC--CCCcHHHHHHHHHHcCCCHHHEEEEC
Confidence 1111 1446666665544333 7899999
Q ss_pred CCCCChhhhhhcCeeEEecCCcchhhhhccccccccch------hhHHHHHHhhhhhhhhhhHhHHHHH
Q 001017 858 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR------FLERLLLVHGHWCYRRISSMICYFF 920 (1189)
Q Consensus 858 DG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~------~l~~lll~~GR~~~~~i~~~i~~~~ 920 (1189)
|+.||++|++.|++++++.+.. ..++..||+++.+.. .+.+. +...|..+.++...+.|.+
T Consensus 107 D~~~Di~~~~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~ 173 (180)
T 1k1e_A 107 DDSVDLPAFAACGTSFAVADAP-IYVKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFLK 173 (180)
T ss_dssp CSGGGHHHHHHSSEEEECTTSC-HHHHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHHH
T ss_pred CCHHHHHHHHHcCCeEEeCCcc-HHHHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchhh
Confidence 9999999999999999995433 336788999998742 23333 3345556777776666654
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.71 E-value=1.2e-08 Score=113.45 Aligned_cols=208 Identities=13% Similarity=0.137 Sum_probs=98.3
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCC--------CcccccchhhHHHHHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET--------PESKTLEKSEDKSAAAAA 771 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~--------~~~~~~~~~~~~~~~~~~ 771 (1189)
.+-+.+.++|++|++.|++++++||+....+..+...+|+.......+..++.. .....+..+.....++..
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~~ 101 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAWA 101 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHHH
Confidence 467788999999999999999999999999999999998754333333333320 011112222222222211
Q ss_pred HHHhH-------------------HH----HHhhhh---hccccCCCCCCCeEEEEcCchh-hhhhhHHHHHHHHH-HHh
Q 001017 772 LKASV-------------------LH----QLIRGK---ELLDSSNESLGPLALIIDGKSL-TYALEDDVKDLFLE-LAI 823 (1189)
Q Consensus 772 ~~~~~-------------------~~----~~~~~~---~~~~~~~~~~~~~~lvi~G~~l-~~~~~~~~~~~~~~-~~~ 823 (1189)
....+ .. ...... ..............+++.+..- .....+.+.+.+.. +..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (279)
T 3mpo_A 102 RKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFSV 181 (279)
T ss_dssp HHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEEE
T ss_pred HHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEEE
Confidence 11100 00 000000 0000000011112222222210 00001111111111 000
Q ss_pred ccceeEEEeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccch---
Q 001017 824 GCASVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR--- 895 (1189)
Q Consensus 824 ~~~~vv~~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~--- 895 (1189)
......+....|. .|+..++.+.++.| ..|++|||+.||++|++.|++||+|++... ..+.+||++..+.+
T Consensus 182 ~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~-~~k~~A~~v~~~~~e~G 260 (279)
T 3mpo_A 182 VQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAID-EVKEAAQAVTLTNAENG 260 (279)
T ss_dssp ECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CC-HHHHHCSCBC------C
T ss_pred EEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCH-HHHHhcceeccCCCccH
Confidence 0011123344453 59999998887644 679999999999999999999999965443 48899999987522
Q ss_pred ---hhHHHHHHhhhhh
Q 001017 896 ---FLERLLLVHGHWC 908 (1189)
Q Consensus 896 ---~l~~lll~~GR~~ 908 (1189)
.+.++++-+|+..
T Consensus 261 v~~~i~~~~~~~~~~~ 276 (279)
T 3mpo_A 261 VAAAIRKYALNEGHHH 276 (279)
T ss_dssp HHHHHC----------
T ss_pred HHHHHHHHhcccCccc
Confidence 2556656666643
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.71 E-value=2.7e-08 Score=105.12 Aligned_cols=108 Identities=14% Similarity=0.129 Sum_probs=84.9
Q ss_pred EEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHH
Q 001017 691 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAA 770 (1189)
Q Consensus 691 llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 770 (1189)
.+....+.|.+ +|+.|+++|+++.++||+....+..+++++|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 44555555554 9999999999999999999999999999999832
Q ss_pred HHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc--
Q 001017 771 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK-- 848 (1189)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~-- 848 (1189)
++... ..|..+++.+.+.
T Consensus 118 ----------------------------------------------------------~f~~~--k~K~~~l~~~~~~lg 137 (211)
T 3ij5_A 118 ----------------------------------------------------------LYQGQ--SDKLVAYHELLATLQ 137 (211)
T ss_dssp ----------------------------------------------------------EECSC--SSHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------------hhccc--CChHHHHHHHHHHcC
Confidence 22222 5577777766553
Q ss_pred -CCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 849 -TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 849 -~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
..+.+++|||+.||++|++.|++++++.+.. ..++..||+++.+.
T Consensus 138 ~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~-~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 138 CQPEQVAYIGDDLIDWPVMAQVGLSVAVADAH-PLLLPKAHYVTRIK 183 (211)
T ss_dssp CCGGGEEEEECSGGGHHHHTTSSEEEECTTSC-TTTGGGSSEECSSC
T ss_pred cCcceEEEEcCCHHHHHHHHHCCCEEEeCCcc-HHHHhhCCEEEeCC
Confidence 2478999999999999999999999996543 33788999998764
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.69 E-value=2.1e-08 Score=114.61 Aligned_cols=150 Identities=20% Similarity=0.162 Sum_probs=96.1
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+|+.++++.|+++|+++.|+||+....+..++..+|+...-...+.+...
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~--------------------------- 230 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSG--------------------------- 230 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCC---------------------------
Confidence 68999999999999999999999999999999999999984311111111100
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEe-CCcccHHHHHHHHHhc---CCCeEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTK---TSSTTLA 855 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r-~sP~qK~~iV~~l~~~---~~~~vl~ 855 (1189)
.++|. +... ..+..|...++.+.+. ....|+|
T Consensus 231 --------------------~~tg~------------------------~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~ 266 (335)
T 3n28_A 231 --------------------KLTGQ------------------------VLGEVVSAQTKADILLTLAQQYDVEIHNTVA 266 (335)
T ss_dssp --------------------EEEEE------------------------EESCCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------ecccccChhhhHHHHHHHHHHcCCChhhEEE
Confidence 00110 0000 1234466555555443 3478999
Q ss_pred EcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhhHHHHHHhhhhhhhhhhHhHHHHHHHH
Q 001017 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKN 923 (1189)
Q Consensus 856 iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~kn 923 (1189)
||||.||++|++.|++|++|.+.+. .+..||+++.. +.-+..+ +......-.|++.++.+.+.+|
T Consensus 267 vGDs~nDi~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 267 VGDGANDLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC--------
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhccccccccccc
Confidence 9999999999999999999944333 77889998854 2224444 3444445568888888877665
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.68 E-value=1.7e-08 Score=112.73 Aligned_cols=77 Identities=16% Similarity=0.185 Sum_probs=56.0
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccch------hhHHHHHHhhh
Q 001017 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR------FLERLLLVHGH 906 (1189)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~------~l~~lll~~GR 906 (1189)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+|.+.. ..++..||++..+.. .|.+++...++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~ 279 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAV-PEIKRKADWVTRSNDEQGVAYMMKEYFRMQQR 279 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHSSEECCCTTTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCc-HHHHHhcCEECCCCCccHHHHHHHHHHHhcCc
Confidence 479999988877644 67999999999999999999999996544 448999999987632 25566555666
Q ss_pred hhhhhhh
Q 001017 907 WCYRRIS 913 (1189)
Q Consensus 907 ~~~~~i~ 913 (1189)
+-|.+-.
T Consensus 280 ~~~~~~~ 286 (290)
T 3dnp_A 280 KGFLDKF 286 (290)
T ss_dssp C------
T ss_pred ccHHhHh
Confidence 6555443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.4e-08 Score=101.18 Aligned_cols=107 Identities=11% Similarity=0.048 Sum_probs=82.4
Q ss_pred CceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHH--HcCcccCCceEEEEeCCCCcccccchhhHH
Q 001017 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGF--ACSLLRQGMRQVIISSETPESKTLEKSEDK 765 (1189)
Q Consensus 688 ~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~--~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~ 765 (1189)
+-..++.+.++|.. +|+.|++.|+++.|+||+ ..+..+++ .+|+.
T Consensus 30 ~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 44567777777773 899999999999999999 67778888 44541
Q ss_pred HHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHH
Q 001017 766 SAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLV 845 (1189)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l 845 (1189)
++ ..+.+|...++.+
T Consensus 77 ---------------------------------------------------------------~~--~g~~~K~~~l~~~ 91 (168)
T 3ewi_A 77 ---------------------------------------------------------------TE--VSVSDKLATVDEW 91 (168)
T ss_dssp ---------------------------------------------------------------EE--CSCSCHHHHHHHH
T ss_pred ---------------------------------------------------------------EE--ECCCChHHHHHHH
Confidence 11 1134677777766
Q ss_pred HhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 846 KTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 846 ~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.+..+ ..+++|||+.||++|++.|+++++|.+. ...++..||+++..
T Consensus 92 ~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na-~~~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 92 RKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADA-CSGAQKAVGYICKC 141 (168)
T ss_dssp HHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTC-CHHHHTTCSEECSS
T ss_pred HHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCCh-hHHHHHhCCEEeCC
Confidence 65433 6899999999999999999999999544 34489999999875
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.65 E-value=5.9e-08 Score=99.61 Aligned_cols=115 Identities=13% Similarity=0.149 Sum_probs=86.9
Q ss_pred EEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHH
Q 001017 691 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAA 770 (1189)
Q Consensus 691 llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 770 (1189)
.+....+.|.+ +|+.|+++|+++.++||+....+..+++.+|+.
T Consensus 36 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------------------------ 79 (176)
T 3mmz_A 36 EFVSVHRGDGL------GIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------------------------ 79 (176)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC------------------------------
T ss_pred HhHhcccccHH------HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe------------------------------
Confidence 34445555544 899999999999999999999999999999972
Q ss_pred HHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcC-
Q 001017 771 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT- 849 (1189)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~- 849 (1189)
+++.. ..|...++.+.+..
T Consensus 80 ----------------------------------------------------------~~~~~--~~k~~~l~~~~~~~~ 99 (176)
T 3mmz_A 80 ----------------------------------------------------------VLHGI--DRKDLALKQWCEEQG 99 (176)
T ss_dssp ----------------------------------------------------------EEESC--SCHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------------eEeCC--CChHHHHHHHHHHcC
Confidence 11111 45666666665533
Q ss_pred --CCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc------chhhHHHHH
Q 001017 850 --SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLL 902 (1189)
Q Consensus 850 --~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~------f~~l~~lll 902 (1189)
.+.+++|||+.||++|++.|++|+++.+.. ..++..||+++.+ .+.+..+|+
T Consensus 100 ~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~-~~~~~~ad~v~~~~~~~g~~~~l~~~l~ 159 (176)
T 3mmz_A 100 IAPERVLYVGNDVNDLPCFALVGWPVAVASAH-DVVRGAARAVTTVPGGDGAIREIASWIL 159 (176)
T ss_dssp CCGGGEEEEECSGGGHHHHHHSSEEEECTTCC-HHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred CCHHHEEEEcCCHHHHHHHHHCCCeEECCChh-HHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 378999999999999999999999995433 3378889999987 445656533
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.63 E-value=3.4e-08 Score=106.02 Aligned_cols=178 Identities=13% Similarity=0.076 Sum_probs=98.6
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCc---cccc-chhhHHHHHHHHHH
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE---SKTL-EKSEDKSAAAAALK 773 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~---~~~~-~~~~~~~~~~~~~~ 773 (1189)
..++.+++.++|++|+++|++++++||+....+..+++++|+.. ..+..++.... ...+ ..... ....
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~~i~~~~~l-~~~~---- 91 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNE-GTNK---- 91 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSH-HHHH----
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC---eEEEeCCcEEEeCCCCEEEEeccH-HHHH----
Confidence 34678889999999999999999999999999999999988732 12222222110 0111 00100 1111
Q ss_pred HhHHHHHhhhh---hccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhcccee---EEEeCCc--ccHHHHHHHH
Q 001017 774 ASVLHQLIRGK---ELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV---ICCRSSP--KQKALVTRLV 845 (1189)
Q Consensus 774 ~~~~~~~~~~~---~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~v---v~~r~sP--~qK~~iV~~l 845 (1189)
.+ ..+.... ..+.... ....... + +. ..+++..+.+.+.. ....+ -+.++.| ..|...++.+
T Consensus 92 -~i-~~~~~~~~~~~~~~~~~-~~~~~~~-~----~~-~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l 161 (227)
T 1l6r_A 92 -FL-EEMSKRTSMRSILTNRW-REASTGF-D----ID-PEDVDYVRKEAESR-GFVIFYSGYSWHLMNRGEDKAFAVNKL 161 (227)
T ss_dssp -HH-HHHTTTSSCBCCGGGGG-CSSSEEE-B----CC-GGGHHHHHHHHHTT-TEEEEEETTEEEEEETTCSHHHHHHHH
T ss_pred -HH-HHHHHHhcCCccccccc-eecccce-E----Ee-cCCHHHHHHHHHhc-CEEEEecCcEEEEecCCCCHHHHHHHH
Confidence 11 1111100 0000000 0001100 0 10 11112122222111 11111 1223446 5899999988
Q ss_pred HhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 846 KTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 846 ~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
.+..+ ..++++||+.||.+|++.|++||+|.+.. ..++..||+++.+.
T Consensus 162 ~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~-~~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 162 KEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANAT-DNIKAVSDFVSDYS 212 (227)
T ss_dssp HHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSC-HHHHHHCSEECSCC
T ss_pred HHHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCch-HHHHHhCCEEecCC
Confidence 76543 57999999999999999999999996443 34778899988763
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.60 E-value=2.3e-07 Score=103.19 Aligned_cols=189 Identities=14% Similarity=0.128 Sum_probs=103.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc----cCCceEEEEeCCCCcccccchhhHHHHHHHHHHH-
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETPESKTLEKSEDKSAAAAALKA- 774 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~- 774 (1189)
.+-+.+.++|++|++.|++++++||+....+..+...+++. ..++..+...+.......+..+.....++.....
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 47788999999999999999999999999999988877642 2222222222111111222322222222222111
Q ss_pred --------------------hHHHHHhhhh-------hccccCCCCCCCeEEEE-cCchhhhhhhHHHHHHHHHHHhccc
Q 001017 775 --------------------SVLHQLIRGK-------ELLDSSNESLGPLALII-DGKSLTYALEDDVKDLFLELAIGCA 826 (1189)
Q Consensus 775 --------------------~~~~~~~~~~-------~~~~~~~~~~~~~~lvi-~G~~l~~~~~~~~~~~~~~~~~~~~ 826 (1189)
.....+.... ..+............+. +....... .+.+.+.+.. ...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~~-~~~l~~~~~~---~~~ 194 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEELC-TPVFIPAWNK---KAH 194 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHHH-TTTHHHHHTT---TEE
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHHH-HHHHHHHhcC---CEE
Confidence 0001111000 00000000111122223 22222211 1123233321 111
Q ss_pred ee----EEEeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 827 SV----ICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 827 ~v----v~~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.+ .+....|. .|+..++.+.++.| ..|++|||+.||++|++.|++||+|++.. ..++..||++..+
T Consensus 195 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~-~~~k~~A~~v~~s 269 (283)
T 3dao_A 195 LAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNAR-QEVIAAAKHTCAP 269 (283)
T ss_dssp EEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSC-HHHHHHSSEEECC
T ss_pred EEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCC-HHHHHhcCeECCC
Confidence 11 12334443 69999998887655 67999999999999999999999996544 4488999999875
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.59 E-value=4.6e-08 Score=101.89 Aligned_cols=124 Identities=15% Similarity=0.132 Sum_probs=87.0
Q ss_pred cCCCCcHHH-------HHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHH
Q 001017 700 KLQNGVPEC-------IDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAAL 772 (1189)
Q Consensus 700 ~lr~~v~~~-------I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 772 (1189)
+..+++.+. |+.|+++|+++.++||+....+..+++.+|+..
T Consensus 39 ~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------------- 87 (191)
T 3n1u_A 39 NHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------------- 87 (191)
T ss_dssp TTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-------------------------------
T ss_pred CCchhhhhccccChHHHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-------------------------------
Confidence 334555555 999999999999999999999999999999842
Q ss_pred HHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCC--cccHHHHHHHHHhcCC
Q 001017 773 KASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTKTS 850 (1189)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~s--P~qK~~iV~~l~~~~~ 850 (1189)
++.... |+-...+++.+.- ..
T Consensus 88 --------------------------------------------------------~~~~~kpk~~~~~~~~~~~~~-~~ 110 (191)
T 3n1u_A 88 --------------------------------------------------------YYKGQVDKRSAYQHLKKTLGL-ND 110 (191)
T ss_dssp --------------------------------------------------------EECSCSSCHHHHHHHHHHHTC-CG
T ss_pred --------------------------------------------------------ceeCCCChHHHHHHHHHHhCC-CH
Confidence 111111 2222233333322 45
Q ss_pred CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc------chhhHHHHHHhhhhhhhhhh
Q 001017 851 STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHWCYRRIS 913 (1189)
Q Consensus 851 ~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~------f~~l~~lll~~GR~~~~~i~ 913 (1189)
..+++|||+.||++|++.|++++++.+.. ..++..||+++.+ .+.+..+ +...|..+..+.
T Consensus 111 ~~~~~vGD~~~Di~~~~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~~ 177 (191)
T 3n1u_A 111 DEFAYIGDDLPDLPLIQQVGLGVAVSNAV-PQVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAELAI 177 (191)
T ss_dssp GGEEEEECSGGGHHHHHHSSEEEECTTCC-HHHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHH
T ss_pred HHEEEECCCHHHHHHHHHCCCEEEeCCcc-HHHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHHH
Confidence 68999999999999999999999996443 4478899999987 3345555 444555555443
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.52 E-value=2.9e-07 Score=100.77 Aligned_cols=57 Identities=26% Similarity=0.320 Sum_probs=47.6
Q ss_pred cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 837 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 837 qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
.|+..++.+.++.| +.|+++||+.||++|++.|++||+|. +....++..||++..+.
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~ 242 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPV 242 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCC
Confidence 69998888877533 67999999999999999999999995 44455888999998653
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=1.7e-07 Score=94.91 Aligned_cols=109 Identities=19% Similarity=0.112 Sum_probs=82.2
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhcc
Q 001017 708 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 787 (1189)
Q Consensus 708 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1189)
+++.|+++|+++.++||+....+..+++.+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999999832
Q ss_pred ccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEEEcCCCCChh
Q 001017 788 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDVG 864 (1189)
Q Consensus 788 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~iGDG~ND~~ 864 (1189)
.+... ..|...++.+.+. ..+.+++|||+.||++
T Consensus 73 -----------------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 109 (164)
T 3e8m_A 73 -----------------------------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAK 109 (164)
T ss_dssp -----------------------------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHH
T ss_pred -----------------------------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 11111 3455555544433 2368999999999999
Q ss_pred hhhhcCeeEEecCCcchhhhhcccccccc------chhhHHHHHHhhhh
Q 001017 865 MLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHW 907 (1189)
Q Consensus 865 ml~~A~vGI~i~g~~~~~a~~~sD~~i~~------f~~l~~lll~~GR~ 907 (1189)
|.+.|++++++.+. ...++..||+++.+ ++.+...++ +|+|
T Consensus 110 ~~~~ag~~~~~~~~-~~~~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~ 156 (164)
T 3e8m_A 110 LLKRVGIAGVPASA-PFYIRRLSTIFLEKRGGEGVFREFVEKVL-GINL 156 (164)
T ss_dssp HHTTSSEEECCTTS-CHHHHTTCSSCCCCCTTTTHHHHHHHHHT-TCCH
T ss_pred HHHHCCCeEEcCCh-HHHHHHhCcEEeccCCCCcHHHHHHHHHH-ccCc
Confidence 99999999998543 33478899999987 444555544 5554
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.47 E-value=1.9e-07 Score=105.06 Aligned_cols=58 Identities=17% Similarity=0.255 Sum_probs=48.7
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+|++.. ..++.+||++..+.
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~-~~~k~~Ad~v~~~~ 287 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAP-KNVKAAANYQAKSN 287 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSC-HHHHHHCSEECCCG
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcC-HHHHHhccEEcCCC
Confidence 479999988877644 67999999999999999999999996544 44899999998763
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.45 E-value=2.4e-07 Score=96.56 Aligned_cols=117 Identities=18% Similarity=0.245 Sum_probs=89.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++.|++++++||+....+..+ +.+|+... ...+.....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~--------------------------- 129 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDG--------------------------- 129 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETT---------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCC---------------------------
Confidence 7899999999999999999999999998888888 88886322 111111100
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
........|..|...++.+ ....+++|||+
T Consensus 130 -----------------------------------------------~~~~~~~~~~~k~~~l~~l---~~~~~i~iGD~ 159 (201)
T 4ap9_A 130 -----------------------------------------------KFQGIRLRFRDKGEFLKRF---RDGFILAMGDG 159 (201)
T ss_dssp -----------------------------------------------EEEEEECCSSCHHHHHGGG---TTSCEEEEECT
T ss_pred -----------------------------------------------ceECCcCCccCHHHHHHhc---CcCcEEEEeCC
Confidence 0011456678899888888 35789999999
Q ss_pred CCChhhhhhcCeeEEecCCcchhhhhccccccccchhhHHH
Q 001017 860 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 860 ~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~l~~l 900 (1189)
.||++|++.|++||+|.+... .||+++.++.-+..+
T Consensus 160 ~~Di~~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 160 YADAKMFERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp TCCHHHHHHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred HHHHHHHHhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 999999999999999965443 789999887776655
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=8.2e-07 Score=87.92 Aligned_cols=106 Identities=18% Similarity=0.373 Sum_probs=77.9
Q ss_pred cCChhHHHHHHHHHHC-CcEEEEecCceeEEEecCCCCCcceeEEEE-EeeeecCCCCCceEEEEEEeCCCeEEEEEecC
Q 001017 533 AESPDEAAFVIAAREL-GFEFYERTQTSISVHELDPVTGTKVERSYS-LLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGA 610 (1189)
Q Consensus 533 ~~sp~e~alv~~a~~~-g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~-il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa 610 (1189)
++||...|++++|++. |..... .. + .....+|++..++..|.+ +| ..+.+|+
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~--------------------~~-~~~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn 102 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERD--------------------VQ-SLHATFVPFTAQSRMSGINI---DN--RMIRKGS 102 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCC--------------------HH-HHTCEEEEEETTTTEEEEEE---TT--EEEEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCccc--------------------cc-ccccceeeccccCCCCeEEE---CC--EEEEEeC
Confidence 5799999999999976 543211 00 0 012357888777667644 55 3567899
Q ss_pred chHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCce
Q 001017 611 DSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLI 690 (1189)
Q Consensus 611 ~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~ 690 (1189)
+..|.+.+...+-...+.+.+.+++++.+|.+++++| .|.+
T Consensus 103 ~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA---------------------------------------~d~~ 143 (156)
T 1svj_A 103 VDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSR 143 (156)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEE---------------------------------------ETTE
T ss_pred cHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEE---------------------------------------ECCE
Confidence 9888877765443444467788899999999999999 5678
Q ss_pred EEEeeeecccCCC
Q 001017 691 LLGATAVEDKLQN 703 (1189)
Q Consensus 691 llG~~~ieD~lr~ 703 (1189)
++|++++.|++|+
T Consensus 144 l~GvIalaD~iK~ 156 (156)
T 1svj_A 144 VLGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEEECCCC
T ss_pred EEEEEEEecCCCC
Confidence 9999999999996
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.38 E-value=3.7e-07 Score=100.83 Aligned_cols=59 Identities=19% Similarity=0.284 Sum_probs=48.3
Q ss_pred ccHHHHHHHHHhcC---CCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccch
Q 001017 836 KQKALVTRLVKTKT---SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (1189)
Q Consensus 836 ~qK~~iV~~l~~~~---~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~ 895 (1189)
..|+..++.+.++. .+.+++|||+.||++|++.|++||+|++.. ..++..||++..+..
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~A~~v~~~~~ 260 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSH-QQLKDIATSICEDIF 260 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSC-HHHHHHCSEEECCGG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCcc-HHHHHhhhheeCCCc
Confidence 36998888877653 367999999999999999999999995544 448899999987633
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.36 E-value=5.4e-07 Score=100.25 Aligned_cols=57 Identities=23% Similarity=0.193 Sum_probs=46.6
Q ss_pred eCCc--ccHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccc
Q 001017 832 RSSP--KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 889 (1189)
Q Consensus 832 r~sP--~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~ 889 (1189)
.+.| ..|+..++.+.++.| +.|++|||+.||++|++.|++||+|++.. ..++++||+
T Consensus 202 ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~-~~vk~~A~~ 263 (285)
T 3pgv_A 202 EVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAH-QRLKDLHPE 263 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCTT
T ss_pred EEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCC-HHHHHhCCC
Confidence 3444 469999998887655 68999999999999999999999996544 448899985
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.35 E-value=4.2e-07 Score=100.97 Aligned_cols=62 Identities=19% Similarity=0.261 Sum_probs=49.4
Q ss_pred EeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 831 CRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 831 ~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.++.|. .|+..++.+.+..| ..++++||+.||++|++.|++||+|.+.. ...+..||+++.+
T Consensus 190 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~-~~~~~~a~~v~~~ 256 (282)
T 1rkq_A 190 LEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAI-PSVKEVANFVTKS 256 (282)
T ss_dssp EEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECCC
T ss_pred EEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCc-HHHHhhCCEEecC
Confidence 345555 79999998876533 57999999999999999999999996543 3367789998865
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=8.4e-07 Score=92.04 Aligned_cols=97 Identities=12% Similarity=0.126 Sum_probs=74.3
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhcc
Q 001017 708 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 787 (1189)
Q Consensus 708 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1189)
+|+.|+++|+++.++||+....+..+.+.+|+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------------------------- 94 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------------------------- 94 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce----------------------------------------------
Confidence 8999999999999999999999999999988731
Q ss_pred ccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCC---CeEEEEcCCCCChh
Q 001017 788 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIGDGANDVG 864 (1189)
Q Consensus 788 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ 864 (1189)
++.. ...|...++.+.+..| +.+++|||+.||++
T Consensus 95 -----------------------------------------~~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~ 131 (188)
T 2r8e_A 95 -----------------------------------------LYQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWP 131 (188)
T ss_dssp -----------------------------------------EECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHH
T ss_pred -----------------------------------------eecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 1111 1334445554443223 68999999999999
Q ss_pred hhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 865 MLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 865 ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
|.+.|++++++.... ..++..||+++.+.
T Consensus 132 ~a~~ag~~~~~~~~~-~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 132 VMEKVGLSVAVADAH-PLLIPRADYVTRIA 160 (188)
T ss_dssp HHTTSSEEEECTTSC-TTTGGGSSEECSSC
T ss_pred HHHHCCCEEEecCcC-HHHHhcCCEEEeCC
Confidence 999999999885432 33667899999885
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.30 E-value=1.6e-06 Score=94.35 Aligned_cols=58 Identities=19% Similarity=0.180 Sum_probs=46.8
Q ss_pred ccHHHHHHHHHhc----CCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 836 KQKALVTRLVKTK----TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 836 ~qK~~iV~~l~~~----~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
..|+..++.+.++ ....|++||||.||.+|++.|++||+|++......+..||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4699999988875 336899999999999999999999999765433366678888754
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=8.1e-07 Score=93.36 Aligned_cols=125 Identities=21% Similarity=0.275 Sum_probs=83.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++.|+++.++||+....+..+...+|+...-...+.....
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 128 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG--------------------------- 128 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC---------------------------
Confidence 56789999999999999999999999988888887777762100000000000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEe-CCcccHHHHHHHHHhcCC---CeEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKTS---STTLA 855 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r-~sP~qK~~iV~~l~~~~~---~~vl~ 855 (1189)
.++|. +... +.+..|...+..+.+..| +.+++
T Consensus 129 --------------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~ 164 (211)
T 1l7m_A 129 --------------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDTVA 164 (211)
T ss_dssp --------------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHEEE
Confidence 00000 1111 123567766665554333 67999
Q ss_pred EcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhh
Q 001017 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFL 897 (1189)
Q Consensus 856 iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l 897 (1189)
|||+.||++|++.|++++++.+.+ ..+..||+++.+ +.-+
T Consensus 165 iGD~~~Di~~~~~ag~~~~~~~~~--~~~~~a~~v~~~~~~~~l 206 (211)
T 1l7m_A 165 VGDGANDISMFKKAGLKIAFCAKP--ILKEKADICIEKRDLREI 206 (211)
T ss_dssp EECSGGGHHHHHHCSEEEEESCCH--HHHTTCSEEECSSCGGGG
T ss_pred EecChhHHHHHHHCCCEEEECCCH--HHHhhcceeecchhHHHH
Confidence 999999999999999999996433 256779998876 4444
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.25 E-value=2.1e-06 Score=94.36 Aligned_cols=58 Identities=29% Similarity=0.378 Sum_probs=48.8
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
..|+..++.+.++.| +.|+++||+.||++|++.|++||+|.+.. ..++.+||++..+.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~-~~~k~~Ad~v~~~~ 253 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNAS-EKVQSVADFVTDTV 253 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHTCSEECCCT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCc-HHHHHhcCEeeCCC
Confidence 479999988877644 67999999999999999999999996544 44889999998763
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.25 E-value=1.5e-06 Score=91.89 Aligned_cols=129 Identities=19% Similarity=0.246 Sum_probs=89.2
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-...+.....
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND-------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC--------------------------
Confidence 458999999999999999999999999999999999998874311111111100
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeC-CcccHHHHHHHHHhc---CCCeEE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS-SPKQKALVTRLVKTK---TSSTTL 854 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~-sP~qK~~iV~~l~~~---~~~~vl 854 (1189)
.++| .+...+ ....|..+++.+.+. ....++
T Consensus 128 ---------------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i 162 (217)
T 3m1y_A 128 ---------------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTNTL 162 (217)
T ss_dssp ---------------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTTEE
T ss_pred ---------------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhHEE
Confidence 0000 011111 234567766666554 236799
Q ss_pred EEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHH
Q 001017 855 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERL 900 (1189)
Q Consensus 855 ~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~l 900 (1189)
+|||+.||++|++.|++++++.+.+ ..+..||+++.+.++ +..+
T Consensus 163 ~vGDs~~Di~~a~~aG~~~~~~~~~--~l~~~ad~v~~~~dl~~~~~~ 208 (217)
T 3m1y_A 163 VVGDGANDLSMFKHAHIKIAFNAKE--VLKQHATHCINEPDLALIKPL 208 (217)
T ss_dssp EEECSGGGHHHHTTCSEEEEESCCH--HHHTTCSEEECSSBGGGGTTC
T ss_pred EEeCCHHHHHHHHHCCCeEEECccH--HHHHhcceeecccCHHHHHHH
Confidence 9999999999999999999994333 367889999976443 4444
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.22 E-value=2.8e-06 Score=91.75 Aligned_cols=177 Identities=11% Similarity=0.070 Sum_probs=92.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc-CcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC-SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~-gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
.+.+.+.++|++|+++| +++++||+....+..+...+ .++..++..+..+++. ... ........+.......+..
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~--~~~-~~~~~~~~l~~~~~~~i~~ 98 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQI--VYN-NGSDRFLGVFDRIYEDTRS 98 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEE--EEC-TTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCee--eec-ccccccchhhHHHHHHHHH
Confidence 46678899999999999 99999999999988887654 2233333322221110 000 0000111121111111111
Q ss_pred HHhhh-hhccccCCCCCCCeEEEEcCchhhhhhh---HHHHHHHHHHHhccce---eEEEeCCcc--cHHHHHHHHHhcC
Q 001017 779 QLIRG-KELLDSSNESLGPLALIIDGKSLTYALE---DDVKDLFLELAIGCAS---VICCRSSPK--QKALVTRLVKTKT 849 (1189)
Q Consensus 779 ~~~~~-~~~~~~~~~~~~~~~lvi~G~~l~~~~~---~~~~~~~~~~~~~~~~---vv~~r~sP~--qK~~iV~~l~~~~ 849 (1189)
.+... ...+... .......-..+..... +.+.+.+... ..... .-+..+.|. .|+..++.+.++.
T Consensus 99 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~ 172 (239)
T 1u02_A 99 WVSDFPGLRIYRK-----NLAVLYHLGLMGADMKPKLRSRIEEIARI-FGVETYYGKMIIELRVPGVNKGSAIRSVRGER 172 (239)
T ss_dssp HHHHSTTCEEEEE-----TTEEEEECTTSCSTTHHHHHHHHHHHHHH-HTCEEEECSSEEEEECTTCCHHHHHHHHHTTS
T ss_pred HHhhCCCcEEEec-----CCEEEEEcCCCChhHHHHHHHHHHHHhcc-CCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhC
Confidence 11110 0000000 0011111010110001 1122222221 11110 113345554 7999999999866
Q ss_pred CCeEEEEcCCCCChhhhhhc--CeeEEecCCcchhhhhcccccccc
Q 001017 850 SSTTLAIGDGANDVGMLQEA--DIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 850 ~~~vl~iGDG~ND~~ml~~A--~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
| |+++||+.||.+||+.| ++||+|.+. +..||+++.+
T Consensus 173 g--via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 173 P--AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp C--EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred C--eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 7 99999999999999999 999999653 5678887765
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.21 E-value=8.1e-07 Score=99.59 Aligned_cols=60 Identities=15% Similarity=0.217 Sum_probs=48.5
Q ss_pred eCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccc
Q 001017 832 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA 892 (1189)
Q Consensus 832 r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~ 892 (1189)
++.|. .|+..++.+.+..| ..|++|||+.||.+|++.|++||+|++.. ...+..||+++.
T Consensus 217 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~-~~~k~~a~~v~~ 281 (301)
T 2b30_A 217 EVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANAT-DSAKSHAKCVLP 281 (301)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCC-HHHHHHSSEECS
T ss_pred EecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCc-HHHHhhCCEEEc
Confidence 34444 79999998877544 57999999999999999999999996543 336778999887
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.18 E-value=2.2e-06 Score=97.50 Aligned_cols=72 Identities=17% Similarity=0.259 Sum_probs=54.5
Q ss_pred cccHHHHHHHHHhc-CCCeEEEEcCCCCChhhhhhc----CeeEEecCCcchhhhhccccccccc------hhhHHHHHH
Q 001017 835 PKQKALVTRLVKTK-TSSTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQF------RFLERLLLV 903 (1189)
Q Consensus 835 P~qK~~iV~~l~~~-~~~~vl~iGDG~ND~~ml~~A----~vGI~i~g~~~~~a~~~sD~~i~~f------~~l~~lll~ 903 (1189)
+.+|+..++.+... ..+.|+++|||.||++|++.| ++||+| +. ...++..||+++.+. ..|..+ +.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na-~~~lk~~Ad~v~~~~~~dGV~~~l~~~-~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NG-NEYALKHADVVIISPTAMSEAKVIELF-ME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SC-CHHHHTTCSEEEECSSTHHHHHHHHHH-HH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cC-CHHHHhhCcEEecCCCCCHHHHHHHHH-HH
Confidence 56799888866541 114599999999999999999 999999 54 344888999998762 224444 67
Q ss_pred hhhhhh
Q 001017 904 HGHWCY 909 (1189)
Q Consensus 904 ~GR~~~ 909 (1189)
.||..+
T Consensus 282 ~~~~~~ 287 (332)
T 1y8a_A 282 RKERAF 287 (332)
T ss_dssp HGGGGG
T ss_pred cCCchh
Confidence 888777
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.3e-06 Score=100.67 Aligned_cols=122 Identities=20% Similarity=0.270 Sum_probs=86.7
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.||+.++++.|++.|+++.++||.....+..+++.+|+...-...+.+...
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg--------------------------- 308 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG--------------------------- 308 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT---------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC---------------------------
Confidence 79999999999999999999999999999999999999984211010100000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCC---CeEEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAI 856 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~---~~vl~i 856 (1189)
.++|.... .-..++.|..+++.+.+..| +.+++|
T Consensus 309 --------------------~~tg~~~~-----------------------~v~~~kpk~~~~~~~~~~~gi~~~~~i~v 345 (415)
T 3p96_A 309 --------------------TLTGRVVG-----------------------PIIDRAGKATALREFAQRAGVPMAQTVAV 345 (415)
T ss_dssp --------------------EEEEEECS-----------------------SCCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------EEEeeEcc-----------------------CCCCCcchHHHHHHHHHHcCcChhhEEEE
Confidence 11111000 00124567777776655433 679999
Q ss_pred cCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 857 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 857 GDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
|||.||++|++.|++|+++.+.+. .+..||+++..
T Consensus 346 GD~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~ 380 (415)
T 3p96_A 346 GDGANDIDMLAAAGLGIAFNAKPA--LREVADASLSH 380 (415)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECS
T ss_pred ECCHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEcc
Confidence 999999999999999999944333 67889999875
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.16 E-value=2.2e-06 Score=90.41 Aligned_cols=134 Identities=17% Similarity=0.237 Sum_probs=86.7
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
.+.+++.++++.|++.|+++.++||.....+..+.+.+|+.... .+..
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~------------------------------ 129 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFAV------------------------------ 129 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEEE------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEEe------------------------------
Confidence 37899999999999999999999999999999999999884211 1000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
.+++++.... ..+.....+|..|...+........+.+++|||+
T Consensus 130 ------------------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~ 173 (219)
T 3kd3_A 130 ------------------ETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDG 173 (219)
T ss_dssp ------------------EEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESS
T ss_pred ------------------eeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEECC
Confidence 0011000000 0011122345566655554422256889999999
Q ss_pred CCChhhhhh--cCeeEEec-CCcchhhhhccccccccchhhHHHH
Q 001017 860 ANDVGMLQE--ADIGVGIS-GVEGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 860 ~ND~~ml~~--A~vGI~i~-g~~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
.||++|+++ +.+||++. ++.....+..||+++.++.-+..+|
T Consensus 174 ~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 174 YTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp HHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred HhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 999999965 22455443 2233335678999999887777653
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.13 E-value=3.2e-06 Score=95.17 Aligned_cols=120 Identities=18% Similarity=0.195 Sum_probs=82.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.||+.++++.|+++|+++.++||.....+..+.+.+|+...-...+.....
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg--------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN--------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------------------
Confidence 48999999999999999999999999999999999999984211111111100
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEe-CCcccHHHHHHHHHhc---CCCeEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTK---TSSTTLA 855 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r-~sP~qK~~iV~~l~~~---~~~~vl~ 855 (1189)
.++|. +... ..++.|..+++.+.+. ....+++
T Consensus 232 --------------------~~tg~------------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~ 267 (317)
T 4eze_A 232 --------------------VLTDN------------------------ITLPIMNAANKKQTLVDLAARLNIATENIIA 267 (317)
T ss_dssp --------------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 00000 0000 1234566666555443 2368999
Q ss_pred EcCCCCChhhhhhcCeeEEecCCcchhhhhccccccc
Q 001017 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA 892 (1189)
Q Consensus 856 iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~ 892 (1189)
|||+.||++|.+.|++|+++.+.+. .+..||.++.
T Consensus 268 VGDs~~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~ 302 (317)
T 4eze_A 268 CGDGANDLPMLEHAGTGIAWKAKPV--VREKIHHQIN 302 (317)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHHHCCEEES
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHHhcCeeeC
Confidence 9999999999999999999943333 5667787764
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.10 E-value=1.3e-05 Score=88.41 Aligned_cols=58 Identities=21% Similarity=0.176 Sum_probs=47.6
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
..|...++.+.+..| ..++++||+.||.+|++.|++||+|.+.. ...+..||+++.+.
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~-~~~k~~a~~v~~~~ 250 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAA-ENIKQIARYATDDN 250 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCC-HHHHHHCSEECCCG
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCcc-HHHHHhCCeeCcCC
Confidence 379999988876533 67999999999999999999999996543 34678899998763
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=1.5e-05 Score=87.21 Aligned_cols=54 Identities=15% Similarity=0.239 Sum_probs=44.7
Q ss_pred ccHHHHHHHHHhcCC-----CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 836 KQKALVTRLVKTKTS-----STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 836 ~qK~~iV~~l~~~~~-----~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
..|...++.+.+..| ..++++||+.||.+|++.|++||+|.+... . .++++...
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCC
Confidence 589999998877654 679999999999999999999999976554 2 66777654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=6e-06 Score=86.52 Aligned_cols=124 Identities=21% Similarity=0.120 Sum_probs=87.3
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCC--ceEEEEeCCCCcccccchhhHHHHHHHHHHHhH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG--MRQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...- ..
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 117 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD------------------------------- 117 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG-------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce-------------------------------
Confidence 356799999999999999999999999999999888888874211 00
Q ss_pred HHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCc--ccHHHHHHHHHhc---CCC
Q 001017 777 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP--KQKALVTRLVKTK---TSS 851 (1189)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP--~qK~~iV~~l~~~---~~~ 851 (1189)
+++.-.. .-|..+++.+.+. ...
T Consensus 118 ----------------------------------------------------i~~~~~~~~kp~~~~~~~~~~~~g~~~~ 145 (205)
T 3m9l_A 118 ----------------------------------------------------VLGRDEAPPKPHPGGLLKLAEAWDVSPS 145 (205)
T ss_dssp ----------------------------------------------------EECTTTSCCTTSSHHHHHHHHHTTCCGG
T ss_pred ----------------------------------------------------EEeCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence 1111001 1122233322222 336
Q ss_pred eEEEEcCCCCChhhhhhcCe-eEEecCCcchhhhhccccccccchhhHHHHHHhhh
Q 001017 852 TTLAIGDGANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGH 906 (1189)
Q Consensus 852 ~vl~iGDG~ND~~ml~~A~v-GI~i~g~~~~~a~~~sD~~i~~f~~l~~lll~~GR 906 (1189)
.+++|||+.||+.|.+.|++ +|+|..... ..+..||+++.++.-|..++=.+++
T Consensus 146 ~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~-~~~~~ad~v~~~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 146 RMVMVGDYRFDLDCGRAAGTRTVLVNLPDN-PWPELTDWHARDCAQLRDLLSAEGH 200 (205)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEECSSSSC-SCGGGCSEECSSHHHHHHHHHHTTC
T ss_pred HEEEECCCHHHHHHHHHcCCEEEEEeCCCC-cccccCCEEeCCHHHHHHHHHhccc
Confidence 89999999999999999999 999964433 2567799999998888777433333
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.05 E-value=3.3e-06 Score=90.62 Aligned_cols=129 Identities=23% Similarity=0.258 Sum_probs=85.4
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
.++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 149 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--------------------------------- 149 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee---------------------------------
Confidence 45789999999999999999999999999988888888887432111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcC
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGD 858 (1189)
++.++... ...-.|+--..+.+.+.- ....+++|||
T Consensus 150 ---------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~lg~-~~~~~i~vGD 185 (237)
T 4ex6_A 150 ---------------------IAGDDSVE----------------------RGKPHPDMALHVARGLGI-PPERCVVIGD 185 (237)
T ss_dssp ---------------------EECTTTSS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEES
T ss_pred ---------------------EEeCCCCC----------------------CCCCCHHHHHHHHHHcCC-CHHHeEEEcC
Confidence 11111100 000011111223333322 3478999999
Q ss_pred CCCChhhhhhcCe---eEEecCCcchhhhh-ccccccccchhhHHHHHHhh
Q 001017 859 GANDVGMLQEADI---GVGISGVEGMQAVM-SSDIAIAQFRFLERLLLVHG 905 (1189)
Q Consensus 859 G~ND~~ml~~A~v---GI~i~g~~~~~a~~-~sD~~i~~f~~l~~lll~~G 905 (1189)
+.||+.|.+.|++ +|+++.......+. .+|+++.++.-|..+ +..|
T Consensus 186 ~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~-l~~~ 235 (237)
T 4ex6_A 186 GVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA-VLDG 235 (237)
T ss_dssp SHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH-HHHC
T ss_pred CHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH-HHcc
Confidence 9999999999999 66664333222333 799999998888776 4444
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.02 E-value=2.2e-06 Score=94.42 Aligned_cols=61 Identities=25% Similarity=0.371 Sum_probs=48.6
Q ss_pred eCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 832 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 832 r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.+.|. .|...++.+.+..| ..++++||+.||++|++.|++|++|.+. ....+..||+++.+
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~-~~~~~~~a~~v~~~ 248 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENA-IEKVKEASDIVTLT 248 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTS-CHHHHHHCSEECCC
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCC-CHHHHhhCCEEEcc
Confidence 44554 79998888876533 6799999999999999999999999644 33467789998865
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.02 E-value=2.2e-05 Score=82.17 Aligned_cols=124 Identities=19% Similarity=0.179 Sum_probs=88.1
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+|+.++++.|++. +++.++|+.....+..+.+.+|+...-...+.....
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~--------------------------- 120 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS--------------------------- 120 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT---------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCC---------------------------
Confidence 5789999999999999 999999999999999999999974210000111000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEE-eCCcccHHHHHHHHHhcCCCeEEEEcC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC-RSSPKQKALVTRLVKTKTSSTTLAIGD 858 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~-r~sP~qK~~iV~~l~~~~~~~vl~iGD 858 (1189)
. . .... .-.|..|...++.+.. ....+++|||
T Consensus 121 --------------------------~-------------------~-~~~~~~p~p~~~~~~l~~l~~-~~~~~~~iGD 153 (206)
T 1rku_A 121 --------------------------D-------------------R-VVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGD 153 (206)
T ss_dssp --------------------------S-------------------C-EEEEECCSSSHHHHHHHHHHH-TTCEEEEEEC
T ss_pred --------------------------c-------------------e-EEeeecCCCchHHHHHHHHHh-cCCEEEEEeC
Confidence 0 0 0011 2567889999998876 6789999999
Q ss_pred CCCChhhhhhcCeeEEecCCcchhhhh-ccccc-cccchhhHHH
Q 001017 859 GANDVGMLQEADIGVGISGVEGMQAVM-SSDIA-IAQFRFLERL 900 (1189)
Q Consensus 859 G~ND~~ml~~A~vGI~i~g~~~~~a~~-~sD~~-i~~f~~l~~l 900 (1189)
+.||+.|.+.|++++.+...+. .+. +.+++ +.++.-+..+
T Consensus 154 ~~~Di~~a~~aG~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 154 SYNDTTMLSEAHAGILFHAPEN--VIREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp SSTTHHHHHHSSEEEEESCCHH--HHHHCTTSCEECSHHHHHHH
T ss_pred ChhhHHHHHhcCccEEECCcHH--HHHHHhhhccccchHHHHHH
Confidence 9999999999999998843332 333 44554 5566555554
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.01 E-value=1.3e-05 Score=84.94 Aligned_cols=119 Identities=13% Similarity=0.080 Sum_probs=80.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
.+.+++.++++.|++.|++++++|+.....+..+....|+...-...
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~--------------------------------- 140 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDAL--------------------------------- 140 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEE---------------------------------
Confidence 45799999999999999999999999988887777777763211111
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccH--HHHHHHHHhc---CCCeEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK--ALVTRLVKTK---TSSTTL 854 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK--~~iV~~l~~~---~~~~vl 854 (1189)
+++...+..| ...++.+.+. ....++
T Consensus 141 -------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i 171 (226)
T 1te2_A 141 -------------------------------------------------ASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV 171 (226)
T ss_dssp -------------------------------------------------EECTTSSCCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred -------------------------------------------------EeccccCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 1111111111 2233322222 346899
Q ss_pred EEcCCCCChhhhhhcCeeEEecCCc---chhhhhccccccccchhhHHH
Q 001017 855 AIGDGANDVGMLQEADIGVGISGVE---GMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 855 ~iGDG~ND~~ml~~A~vGI~i~g~~---~~~a~~~sD~~i~~f~~l~~l 900 (1189)
+|||+.||++|++.|++++++-... ....+..||+++.++.-+...
T Consensus 172 ~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 172 ALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp EEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred EEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 9999999999999999999882221 112467899999887765544
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.99 E-value=1.4e-05 Score=85.44 Aligned_cols=41 Identities=15% Similarity=0.025 Sum_probs=38.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
.+.+|+.++++.|++.|+++.++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999999999999984
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=97.99 E-value=8.5e-06 Score=86.77 Aligned_cols=131 Identities=19% Similarity=0.220 Sum_probs=87.5
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.||+.++++.|+++|++++++||.....+..+.+.+|+.... .+...
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~~~---------------------------- 134 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANR---------------------------- 134 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEEC----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEeee----------------------------
Confidence 368999999999999999999999999999999999999984210 11000
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeC-----CcccHHHHHHHHHhcCC-Ce
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS-----SPKQKALVTRLVKTKTS-ST 852 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~-----sP~qK~~iV~~l~~~~~-~~ 852 (1189)
+..+.. ..+..... .+..|..+++.+.+..| ..
T Consensus 135 --------------------~~~~~~---------------------~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 173 (225)
T 1nnl_A 135 --------------------LKFYFN---------------------GEYAGFDETQPTAESGGKGKVIKLLKEKFHFKK 173 (225)
T ss_dssp --------------------EEECTT---------------------SCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSC
T ss_pred --------------------EEEcCC---------------------CcEecCCCCCcccCCCchHHHHHHHHHHcCCCc
Confidence 000000 00011111 12356666665544333 67
Q ss_pred EEEEcCCCCChhhhhhcCeeEEecCCc-chhhhhccccccccchhhHHH
Q 001017 853 TLAIGDGANDVGMLQEADIGVGISGVE-GMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 853 vl~iGDG~ND~~ml~~A~vGI~i~g~~-~~~a~~~sD~~i~~f~~l~~l 900 (1189)
+++|||+.||+.|.++|+++|++.... .......+|+++.++.-+..+
T Consensus 174 ~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 174 IIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp EEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred EEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 999999999999999999988885432 122345689998887765544
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.97 E-value=3.7e-05 Score=82.37 Aligned_cols=178 Identities=13% Similarity=0.134 Sum_probs=95.3
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCC----C---cccccchhhHHHHHHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET----P---ESKTLEKSEDKSAAAAA 771 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~----~---~~~~~~~~~~~~~~~~~ 771 (1189)
..+.+.+.+++++|+++|++++++||+....+..+...+|+.. ..+..++.. . ....+ +.....++..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~l--~~~~~i~~~~ 93 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---PVVAEDGGAISYKKKRIFLASM--DEEWILWNEI 93 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEEETTEEEESCCC--SHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC---eEEEeCCcEEEeCCEEEEeccH--HHHHHHHHHH
Confidence 3467788999999999999999999999999999998888632 122212110 0 00111 1111111111
Q ss_pred HHHhHHHHHhhhhhc-cccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhcccee---EEEeCCc--ccHHHHHHHH
Q 001017 772 LKASVLHQLIRGKEL-LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV---ICCRSSP--KQKALVTRLV 845 (1189)
Q Consensus 772 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~v---v~~r~sP--~qK~~iV~~l 845 (1189)
..+.+ +... ..... .... +.+-+... ..+.....+..+......+ .+....| ..|...++.+
T Consensus 94 -----~~~~~-~~~~~~~~~~-~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~ 161 (231)
T 1wr8_A 94 -----RKRFP-NARTSYTMPD-RRAG--LVIMRETI---NVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKA 161 (231)
T ss_dssp -----HHHCT-TCCBCTTGGG-CSSC--EEECTTTS---CHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHH
T ss_pred -----HHhCC-CceEEecCCC-ceee--EEEECCCC---CHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHH
Confidence 10100 0000 00000 0011 12211000 1111222221211111211 1123333 3688888887
Q ss_pred HhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 846 KTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 846 ~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
.+..| ..++++||+.||.+|++.|++|++|.+.. ...+..||+++.+.
T Consensus 162 ~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~-~~~~~~a~~v~~~~ 212 (231)
T 1wr8_A 162 SEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAP-KILKENADYVTKKE 212 (231)
T ss_dssp HHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHTTCSEECSSC
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCC-HHHHhhCCEEecCC
Confidence 66433 67999999999999999999999996543 33667899988763
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.97 E-value=6.4e-05 Score=83.50 Aligned_cols=57 Identities=23% Similarity=0.276 Sum_probs=46.8
Q ss_pred cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 837 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 837 qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
.|+..++.+.+..| ..++++||+.||++|++.|++||+|.+.. ...+..||+++.+.
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~-~~~~~~a~~v~~~~ 275 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAR-EDIKSIADAVTLTN 275 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCC-HHHHHHCSEECCCG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCC-HHHHhhCceeecCC
Confidence 79988888877544 57999999999999999999999996443 34677899988653
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.97 E-value=1e-05 Score=81.33 Aligned_cols=105 Identities=14% Similarity=0.084 Sum_probs=76.8
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHH
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 780 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1189)
+.+++.++|+.|+++|+++.++||.....+..+.+.+|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 45667899999999999999999999999999999998731
Q ss_pred hhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHH-Hhc--CCCeEEEEc
Q 001017 781 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLV-KTK--TSSTTLAIG 857 (1189)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l-~~~--~~~~vl~iG 857 (1189)
.|.. +..|...++.+ ++. ..+.+++||
T Consensus 78 ------------------------------------------------~~~~--~kp~~~~~~~~~~~~~~~~~~~~~vG 107 (162)
T 2p9j_A 78 ------------------------------------------------IYTG--SYKKLEIYEKIKEKYSLKDEEIGFIG 107 (162)
T ss_dssp ------------------------------------------------EEEC--C--CHHHHHHHHHHTTCCGGGEEEEE
T ss_pred ------------------------------------------------hccC--CCCCHHHHHHHHHHcCCCHHHEEEEC
Confidence 1111 12233333322 221 346799999
Q ss_pred CCCCChhhhhhcCeeEEecCCcchhhhhccccccccch
Q 001017 858 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (1189)
Q Consensus 858 DG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~ 895 (1189)
|+.||+.|.+.|++++++.+. ....+..||+++.+..
T Consensus 108 D~~~Di~~a~~ag~~~~~~~~-~~~~~~~a~~v~~~~~ 144 (162)
T 2p9j_A 108 DDVVDIEVMKKVGFPVAVRNA-VEEVRKVAVYITQRNG 144 (162)
T ss_dssp CSGGGHHHHHHSSEEEECTTS-CHHHHHHCSEECSSCS
T ss_pred CCHHHHHHHHHCCCeEEecCc-cHHHHhhCCEEecCCC
Confidence 999999999999999988533 2335678999988744
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.96 E-value=1.1e-05 Score=85.70 Aligned_cols=121 Identities=17% Similarity=0.127 Sum_probs=86.2
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 130 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD---------------------------------- 130 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee----------------------------------
Confidence 3678999999999999999999999999888888888888743111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCc--ccHHHHHHHHHhc---CCCeE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP--KQKALVTRLVKTK---TSSTT 853 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP--~qK~~iV~~l~~~---~~~~v 853 (1189)
.++.+...+ ..|..+++.+.+. ....+
T Consensus 131 ------------------------------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 162 (226)
T 3mc1_A 131 ------------------------------------------------AIVGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162 (226)
T ss_dssp ------------------------------------------------EEEEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred ------------------------------------------------eeeccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence 112222211 2345555544433 23689
Q ss_pred EEEcCCCCChhhhhhcCe---eEEecCCcchh-hhhccccccccchhhHHHH
Q 001017 854 LAIGDGANDVGMLQEADI---GVGISGVEGMQ-AVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 854 l~iGDG~ND~~ml~~A~v---GI~i~g~~~~~-a~~~sD~~i~~f~~l~~ll 901 (1189)
++|||+.||+.|.+.|++ +|+++...... .+..+|+++.++.-|..++
T Consensus 163 i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 163 IMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp EEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred EEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 999999999999999999 55543222221 2478999999988888774
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.95 E-value=1.4e-05 Score=87.37 Aligned_cols=63 Identities=24% Similarity=0.357 Sum_probs=49.8
Q ss_pred cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh--hHHH
Q 001017 837 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERL 900 (1189)
Q Consensus 837 qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~--l~~l 900 (1189)
.|...++.+.+..| ..+++|||+.||++|++.|++|++|.+.. ...+..||+++.+..- +..+
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~-~~~~~~a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAK-EDVKAAADYVTAPIDEDGISKA 254 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHSSEECCCGGGTHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCcc-HHHHhhCCEEeccCchhhHHHH
Confidence 78888887776533 68999999999999999999999995433 3467889999877655 5554
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.4e-05 Score=91.93 Aligned_cols=40 Identities=8% Similarity=0.193 Sum_probs=38.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
++.|++.+.|+.|+++|++|+|+||.....+..+|.++|+
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 4789999999999999999999999999999999999986
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=4.1e-05 Score=82.83 Aligned_cols=62 Identities=21% Similarity=0.298 Sum_probs=47.7
Q ss_pred eCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhc-------cccccccc
Q 001017 832 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-------SDIAIAQF 894 (1189)
Q Consensus 832 r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~-------sD~~i~~f 894 (1189)
.+.|. .|+..++.+.+..| ..++++||+.||.+|++.|++||+|++. ....+.. ||++..+.
T Consensus 155 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na-~~~~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 155 DLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNA-QPELLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTC-CHHHHHHHHHHCCTTEEECSSC
T ss_pred EeccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCC-cHHHHHHHhcccccceeecCCc
Confidence 34454 79999998887544 5799999999999999999999999543 3335554 78887653
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00015 Score=79.79 Aligned_cols=40 Identities=8% Similarity=0.078 Sum_probs=36.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
.+-+.+.++|++|+++|++++++||+....+..+..++++
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 65 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 65 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4557789999999999999999999999999999999876
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.79 E-value=2.7e-05 Score=82.25 Aligned_cols=41 Identities=10% Similarity=0.015 Sum_probs=35.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
.+.+++.++++.|++.|++++++|+.....+.......|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 34699999999999999999999999988888887777764
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.73 E-value=2.8e-05 Score=83.99 Aligned_cols=42 Identities=24% Similarity=0.218 Sum_probs=38.5
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
-++.+++.++++.|++.|++++++|+.....+..+...+|+.
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 467899999999999999999999999999999999999874
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.72 E-value=2.2e-05 Score=84.39 Aligned_cols=121 Identities=17% Similarity=0.165 Sum_probs=84.4
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|++++++|+.....+..+...+|+...-..
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 155 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKY--------------------------------- 155 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEE---------------------------------
Confidence 45789999999999999999999999998888888888887432111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCc--ccHHHHHHHHHhc---C-CCe
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP--KQKALVTRLVKTK---T-SST 852 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP--~qK~~iV~~l~~~---~-~~~ 852 (1189)
++++...+ .-|..+++.+.+. . ...
T Consensus 156 -------------------------------------------------~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 186 (240)
T 3sd7_A 156 -------------------------------------------------IAGSNLDGTRVNKNEVIQYVLDLCNVKDKDK 186 (240)
T ss_dssp -------------------------------------------------EEEECTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred -------------------------------------------------EEeccccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence 12222111 2344444443332 3 568
Q ss_pred EEEEcCCCCChhhhhhcCee-EEec-CCcchh--hhhccccccccchhhHHHH
Q 001017 853 TLAIGDGANDVGMLQEADIG-VGIS-GVEGMQ--AVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 853 vl~iGDG~ND~~ml~~A~vG-I~i~-g~~~~~--a~~~sD~~i~~f~~l~~ll 901 (1189)
+++|||+.||+.|.+.|++. |++. |..... .+..+|+++.++.-+..+|
T Consensus 187 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 187 VIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 99999999999999999993 2332 222211 2467999999988877764
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.71 E-value=1.9e-05 Score=84.23 Aligned_cols=122 Identities=18% Similarity=0.105 Sum_probs=81.6
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+....|+...-..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 136 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN--------------------------------- 136 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe---------------------------------
Confidence 35679999999999999999999999999888888888887431100
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLA 855 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~ 855 (1189)
++.+.... ...-|..+++.+.+. ....+++
T Consensus 137 ---------------------~~~~~~~~--------------------------~~kp~~~~~~~~~~~l~~~~~~~i~ 169 (233)
T 3s6j_A 137 ---------------------IVTRDDVS--------------------------YGKPDPDLFLAAAKKIGAPIDECLV 169 (233)
T ss_dssp ---------------------EECGGGSS--------------------------CCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred ---------------------eeccccCC--------------------------CCCCChHHHHHHHHHhCCCHHHEEE
Confidence 11111000 011123333333332 3367999
Q ss_pred EcCCCCChhhhhhcCe-eEEe--cCCcchhhhhc-cccccccchhhHHH
Q 001017 856 IGDGANDVGMLQEADI-GVGI--SGVEGMQAVMS-SDIAIAQFRFLERL 900 (1189)
Q Consensus 856 iGDG~ND~~ml~~A~v-GI~i--~g~~~~~a~~~-sD~~i~~f~~l~~l 900 (1189)
|||+.||+.|.+.|++ +|++ +.......+.. +|+++.++.-+..+
T Consensus 170 iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~ 218 (233)
T 3s6j_A 170 IGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNH 218 (233)
T ss_dssp EESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHT
T ss_pred EeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHH
Confidence 9999999999999999 3444 22322223333 89999998887776
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.69 E-value=2.6e-05 Score=81.02 Aligned_cols=118 Identities=19% Similarity=0.183 Sum_probs=76.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
.+.+++.++++.|++.|++++++|+....... .....|+...- .
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f-~---------------------------------- 128 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF-T---------------------------------- 128 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE-E----------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe-e----------------------------------
Confidence 46899999999999999999999999887776 66666653210 0
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
.++.+.... ...-.|+--..+.+.+.- ....+++|||+
T Consensus 129 -------------------~~~~~~~~~----------------------~~Kp~~~~~~~~~~~~~i-~~~~~~~iGD~ 166 (207)
T 2go7_A 129 -------------------EILTSQSGF----------------------VRKPSPEAATYLLDKYQL-NSDNTYYIGDR 166 (207)
T ss_dssp -------------------EEECGGGCC----------------------CCTTSSHHHHHHHHHHTC-CGGGEEEEESS
T ss_pred -------------------eEEecCcCC----------------------CCCCCcHHHHHHHHHhCC-CcccEEEECCC
Confidence 011110000 000011111233333332 34689999999
Q ss_pred CCChhhhhhcCee-EEecCCcchhhhhccccccccchhhHHH
Q 001017 860 ANDVGMLQEADIG-VGISGVEGMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 860 ~ND~~ml~~A~vG-I~i~g~~~~~a~~~sD~~i~~f~~l~~l 900 (1189)
.||++|++.|+++ |++.... . .+|+++.++.-+..+
T Consensus 167 ~nDi~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 167 TLDVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRI 203 (207)
T ss_dssp HHHHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHH
T ss_pred HHHHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHH
Confidence 9999999999998 6775332 2 689998887766554
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.69 E-value=6.6e-05 Score=80.04 Aligned_cols=118 Identities=16% Similarity=0.178 Sum_probs=73.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++.|+++.++|+... +..+...+|+...-..
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~---------------------------------- 135 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA---------------------------------- 135 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE----------------------------------
Confidence 4789999999999999999999999754 6667777776321100
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
++.++.. -...-.|.-=..+.+.+.- ....+++|||+
T Consensus 136 --------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~lgi-~~~~~i~vGDs 172 (233)
T 3nas_A 136 --------------------IVDPTTL----------------------AKGKPDPDIFLTAAAMLDV-SPADCAAIEDA 172 (233)
T ss_dssp --------------------ECCC-------------------------------CCHHHHHHHHHTS-CGGGEEEEECS
T ss_pred --------------------EeeHhhC----------------------CCCCCChHHHHHHHHHcCC-CHHHEEEEeCC
Confidence 1111100 0001111111233333322 44789999999
Q ss_pred CCChhhhhhcCeeEEecCCcchhhhhccccccccchhhH
Q 001017 860 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLE 898 (1189)
Q Consensus 860 ~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~l~ 898 (1189)
.||+.|.+.|++++++.+.... .+ .||+++.++.-+.
T Consensus 173 ~~Di~~a~~aG~~~~~~~~~~~-~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 173 EAGISAIKSAGMFAVGVGQGQP-ML-GADLVVRQTSDLT 209 (233)
T ss_dssp HHHHHHHHHTTCEEEECC---------CSEECSSGGGCC
T ss_pred HHHHHHHHHcCCEEEEECCccc-cc-cCCEEeCChHhCC
Confidence 9999999999999988654432 33 8999998866643
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.68 E-value=3.8e-05 Score=80.33 Aligned_cols=123 Identities=10% Similarity=0.045 Sum_probs=81.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++.|++++++|+.....+..+.+..|+...-..
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 134 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI---------------------------------- 134 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee----------------------------------
Confidence 5789999999999999999999999999999999888887432111
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
++.+.... ...-.|.--..+.+.+.- ....+++|||+
T Consensus 135 --------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~iGD~ 171 (214)
T 3e58_A 135 --------------------VLSGEEFK----------------------ESKPNPEIYLTALKQLNV-QASRALIIEDS 171 (214)
T ss_dssp --------------------EEEGGGCS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEECS
T ss_pred --------------------Eeeccccc----------------------CCCCChHHHHHHHHHcCC-ChHHeEEEecc
Confidence 11110000 000011111223333322 34789999999
Q ss_pred CCChhhhhhcCeeEEecCCc-chhhhhccccccccchhhHH
Q 001017 860 ANDVGMLQEADIGVGISGVE-GMQAVMSSDIAIAQFRFLER 899 (1189)
Q Consensus 860 ~ND~~ml~~A~vGI~i~g~~-~~~a~~~sD~~i~~f~~l~~ 899 (1189)
.||+.|.+.|++++.+.+.. .......+|+++.++.-+..
T Consensus 172 ~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 172 EKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGG
T ss_pred HhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHh
Confidence 99999999999988664332 11134678999988766544
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.68 E-value=9.5e-05 Score=78.45 Aligned_cols=116 Identities=18% Similarity=0.024 Sum_probs=80.5
Q ss_pred cCCCCcHHHHHHHHHcC-CeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 700 KLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aG-Ikv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
++.+++.++++.|++.| +++.++|+.....+..+...+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 57899999999999999 9999999988888777777777632110
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLA 855 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~ 855 (1189)
.+++...| |..+++.+.+. ..+.+++
T Consensus 151 -------------------------------------------------~~~~~~kp--k~~~~~~~~~~lgi~~~~~i~ 179 (234)
T 3ddh_A 151 -------------------------------------------------HIEVMSDK--TEKEYLRLLSILQIAPSELLM 179 (234)
T ss_dssp -------------------------------------------------EEEEESCC--SHHHHHHHHHHHTCCGGGEEE
T ss_pred -------------------------------------------------eeeecCCC--CHHHHHHHHHHhCCCcceEEE
Confidence 12232233 45555544443 3378999
Q ss_pred EcCCC-CChhhhhhcCeeEEec------CCcchhhh-hccccccccchhhHHH
Q 001017 856 IGDGA-NDVGMLQEADIGVGIS------GVEGMQAV-MSSDIAIAQFRFLERL 900 (1189)
Q Consensus 856 iGDG~-ND~~ml~~A~vGI~i~------g~~~~~a~-~~sD~~i~~f~~l~~l 900 (1189)
|||+. ||+.|.+.|++++.+- |....... ..+|+++.++.-|..+
T Consensus 180 iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 180 VGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp EESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred ECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 99996 9999999999988663 12211112 3349999887776654
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.65 E-value=4.3e-05 Score=81.17 Aligned_cols=125 Identities=18% Similarity=0.146 Sum_probs=82.8
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 128 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--------------------------------- 128 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE---------------------------------
Confidence 46789999999999999999999999998888888888887431111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcC
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGD 858 (1189)
++.+... ....-.|.--..+.+.+.- ....+++|||
T Consensus 129 ---------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~~~~-~~~~~~~vGD 164 (222)
T 2nyv_A 129 ---------------------IVGGDTF----------------------GEKKPSPTPVLKTLEILGE-EPEKALIVGD 164 (222)
T ss_dssp ---------------------EECTTSS----------------------CTTCCTTHHHHHHHHHHTC-CGGGEEEEES
T ss_pred ---------------------EEecCcC----------------------CCCCCChHHHHHHHHHhCC-CchhEEEECC
Confidence 1111100 0000112222233333322 3468999999
Q ss_pred CCCChhhhhhcCee-EEecC-CcchhhhhccccccccchhhHHHH
Q 001017 859 GANDVGMLQEADIG-VGISG-VEGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 859 G~ND~~ml~~A~vG-I~i~g-~~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
+.||+.|.+.|+++ |++.. ...... ..+|+++.++.-+..++
T Consensus 165 ~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 165 TDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp SHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred CHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 99999999999998 67642 221112 56899988887777663
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00011 Score=80.22 Aligned_cols=56 Identities=14% Similarity=0.227 Sum_probs=45.0
Q ss_pred cHHHHHHHHHhcCCCeEEEEcC----CCCChhhhhhcC-eeEEecCCcchhhhhcccccccc
Q 001017 837 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 837 qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~A~-vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.|+..++.+.......|+++|| |.||.+||+.|+ +|++| ++.....+..||++...
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av-~NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFPE 257 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe-cCCCHHHHHhhheeCCC
Confidence 6999999982213478999999 999999999999 69999 45455578889988654
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=3.3e-05 Score=83.56 Aligned_cols=42 Identities=21% Similarity=0.375 Sum_probs=37.2
Q ss_pred cHHHHHHHHHhcCCCeEEEEcC----CCCChhhhhhcC-eeEEecCCc
Q 001017 837 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVE 879 (1189)
Q Consensus 837 qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~A~-vGI~i~g~~ 879 (1189)
.|+..++.|.+ ....|+++|| |.||.+||+.|+ +|++|++.+
T Consensus 187 ~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~ 233 (246)
T 3f9r_A 187 DKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYK 233 (246)
T ss_dssp SGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHH
T ss_pred CHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHH
Confidence 79999999988 7789999999 799999999996 899996543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.59 E-value=5.4e-05 Score=80.68 Aligned_cols=124 Identities=10% Similarity=-0.034 Sum_probs=83.8
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 144 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDH--------------------------------- 144 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSE---------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCE---------------------------------
Confidence 45789999999999999999999999999888888888887432111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcc--cHHHHHHHHHhcCCCeEEEE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPK--QKALVTRLVKTKTSSTTLAI 856 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~--qK~~iV~~l~~~~~~~vl~i 856 (1189)
++.+.... ...|. --..+.+.+.- ....+++|
T Consensus 145 ---------------------~~~~~~~~------------------------~~kp~~~~~~~~~~~~~~-~~~~~~~v 178 (233)
T 3umb_A 145 ---------------------VLSVDAVR------------------------LYKTAPAAYALAPRAFGV-PAAQILFV 178 (233)
T ss_dssp ---------------------EEEGGGTT------------------------CCTTSHHHHTHHHHHHTS-CGGGEEEE
T ss_pred ---------------------EEEecccC------------------------CCCcCHHHHHHHHHHhCC-CcccEEEE
Confidence 11110000 00111 11122223321 34789999
Q ss_pred cCCCCChhhhhhcCeeEEecC---CcchhhhhccccccccchhhHHHH
Q 001017 857 GDGANDVGMLQEADIGVGISG---VEGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 857 GDG~ND~~ml~~A~vGI~i~g---~~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
||+.||+.|.+.|++++.+-. +.....+..+|+++.++.-+..+|
T Consensus 179 GD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 179 SSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp ESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred eCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 999999999999999998722 222223567999999988887763
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.56 E-value=9.8e-05 Score=79.26 Aligned_cols=136 Identities=13% Similarity=0.148 Sum_probs=86.9
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.||+.++++.|+++|+++.++|+.....+..+.. |+... ..++.-....
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~------------------------- 127 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASF------------------------- 127 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEEC-------------------------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEE-------------------------
Confidence 3688999999999999999999999999888888877 66432 2222111100
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhh-hhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEc
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYA-LEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 857 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~-~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iG 857 (1189)
.+..+... ..+ ....+.+-....|..+++.+.- ....+++||
T Consensus 128 -----------------------~~~~~~~~~~kp-------------~p~~~~~~~~~~K~~~~~~~~~-~~~~~~~vG 170 (236)
T 2fea_A 128 -----------------------DNDYIHIDWPHS-------------CKGTCSNQCGCCKPSVIHELSE-PNQYIIMIG 170 (236)
T ss_dssp -----------------------SSSBCEEECTTC-------------CCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEE
T ss_pred -----------------------cCCceEEecCCC-------------CccccccccCCcHHHHHHHHhc-cCCeEEEEe
Confidence 00000000 000 0000111124578888888764 567899999
Q ss_pred CCCCChhhhhhcCeeEEecCCcchhhhh--ccccccccchhhHHH
Q 001017 858 DGANDVGMLQEADIGVGISGVEGMQAVM--SSDIAIAQFRFLERL 900 (1189)
Q Consensus 858 DG~ND~~ml~~A~vGI~i~g~~~~~a~~--~sD~~i~~f~~l~~l 900 (1189)
|+.+|+.|.+.|++.+...+.. ..... .+|+++.++.-+..+
T Consensus 171 Ds~~Di~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~ 214 (236)
T 2fea_A 171 DSVTDVEAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKE 214 (236)
T ss_dssp CCGGGHHHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHH
T ss_pred CChHHHHHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHH
Confidence 9999999999999988643321 11222 278888887777665
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.55 E-value=6.1e-05 Score=80.02 Aligned_cols=120 Identities=17% Similarity=0.071 Sum_probs=82.3
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 141 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH--------------------------------- 141 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE---------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce---------------------------------
Confidence 46789999999999999999999999998888888888887431111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCc--ccHHHHHHHHHhc---CCCeE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP--KQKALVTRLVKTK---TSSTT 853 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP--~qK~~iV~~l~~~---~~~~v 853 (1189)
+ +.+...+ .-|..+++.+.+. ....+
T Consensus 142 ---------------------~----------------------------~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 172 (230)
T 3um9_A 142 ---------------------L----------------------------ISVDEVRLFKPHQKVYELAMDTLHLGESEI 172 (230)
T ss_dssp ---------------------E----------------------------EEGGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred ---------------------e----------------------------EehhhcccCCCChHHHHHHHHHhCCCcccE
Confidence 1 1111111 1122333322222 34789
Q ss_pred EEEcCCCCChhhhhhcCeeEEecCC---cchhhhhccccccccchhhHHH
Q 001017 854 LAIGDGANDVGMLQEADIGVGISGV---EGMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 854 l~iGDG~ND~~ml~~A~vGI~i~g~---~~~~a~~~sD~~i~~f~~l~~l 900 (1189)
++|||+.||+.|.+.|++++.+-.. .....+..+|+++.++.-+..+
T Consensus 173 ~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 173 LFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 9999999999999999999877322 1122346789999887776654
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.54 E-value=5.6e-05 Score=79.70 Aligned_cols=46 Identities=7% Similarity=0.057 Sum_probs=37.5
Q ss_pred CCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchhh
Q 001017 850 SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL 897 (1189)
Q Consensus 850 ~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~l 897 (1189)
...+++|||+.||+.|++.|++++++.+... ..+ .||+++.++.-+
T Consensus 162 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 162 PSESIGLEDSQAGIQAIKDSGALPIGVGRPE-DLG-DDIVIVPDTSHY 207 (221)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESCHH-HHC-SSSEEESSGGGC
T ss_pred hhHeEEEeCCHHHHHHHHHCCCEEEEECCHH-Hhc-cccchhcCHHhC
Confidence 4689999999999999999999998865433 244 899998876654
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00013 Score=77.68 Aligned_cols=116 Identities=16% Similarity=0.146 Sum_probs=78.9
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-.+.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-..
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 148 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDS--------------------------------- 148 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheee---------------------------------
Confidence 35789999999999999999999999999888888888887431111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccH------HHHHHHHHhcCCC-
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK------ALVTRLVKTKTSS- 851 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK------~~iV~~l~~~~~~- 851 (1189)
++++.-.+..| ..+.+.+.- ...
T Consensus 149 -------------------------------------------------i~~~~~~~~~Kp~~~~~~~~~~~lgi-~~~~ 178 (231)
T 3kzx_A 149 -------------------------------------------------IIGSGDTGTIKPSPEPVLAALTNINI-EPSK 178 (231)
T ss_dssp -------------------------------------------------EEEETSSSCCTTSSHHHHHHHHHHTC-CCST
T ss_pred -------------------------------------------------EEcccccCCCCCChHHHHHHHHHcCC-Cccc
Confidence 11221111111 223333322 334
Q ss_pred eEEEEcCCCCChhhhhhcCe-eEEecCCcchhhhhccccccccchhhHHHH
Q 001017 852 TTLAIGDGANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 852 ~vl~iGDG~ND~~ml~~A~v-GI~i~g~~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
.+++|||+.||+.|.++|++ +|.+..... ..+|+++.+++-|..+|
T Consensus 179 ~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 179 EVFFIGDSISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp TEEEEESSHHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHHH
Confidence 79999999999999999997 556633222 36788888888777663
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00013 Score=77.66 Aligned_cols=121 Identities=12% Similarity=0.079 Sum_probs=79.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCC---hhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDK---METAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~---~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1189)
.+.+++.++++.|++.|+++.++|+.. ...+.......|+...-..
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~------------------------------- 147 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK------------------------------- 147 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE-------------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh-------------------------------
Confidence 458999999999999999999999998 7777777777776431110
Q ss_pred HHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeE
Q 001017 777 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTT 853 (1189)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~v 853 (1189)
++.+.... ...| |..+.+.+.+. ..+.+
T Consensus 148 -----------------------~~~~~~~~------------------------~~kp--~~~~~~~~~~~lgi~~~~~ 178 (235)
T 2om6_A 148 -----------------------TFFADEVL------------------------SYKP--RKEMFEKVLNSFEVKPEES 178 (235)
T ss_dssp -----------------------EEEHHHHT------------------------CCTT--CHHHHHHHHHHTTCCGGGE
T ss_pred -----------------------heeccccC------------------------CCCC--CHHHHHHHHHHcCCCccce
Confidence 11100000 0111 12222222222 34789
Q ss_pred EEEcCCC-CChhhhhhcCeeEEecC--CcchhhhhccccccccchhhHHH
Q 001017 854 LAIGDGA-NDVGMLQEADIGVGISG--VEGMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 854 l~iGDG~-ND~~ml~~A~vGI~i~g--~~~~~a~~~sD~~i~~f~~l~~l 900 (1189)
++|||+. ||+.|.+.|++++++-. ......+..+|+++.++.-+..+
T Consensus 179 ~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 228 (235)
T 2om6_A 179 LHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDV 228 (235)
T ss_dssp EEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred EEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHH
Confidence 9999999 99999999999998732 22222344588888887776665
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.52 E-value=5.8e-05 Score=82.48 Aligned_cols=40 Identities=33% Similarity=0.315 Sum_probs=34.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
.+.+++.++++.|++.|+++.++|++....+..+...+|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 5679999999999999999999999998877777776665
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0001 Score=78.54 Aligned_cols=41 Identities=24% Similarity=0.207 Sum_probs=36.8
Q ss_pred cCCCCcHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|++. |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 4679999999999999 9999999999988888888888874
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=8.4e-05 Score=82.08 Aligned_cols=125 Identities=15% Similarity=0.047 Sum_probs=82.6
Q ss_pred cCCCCcHHHHHHHHHcCC--eEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHH
Q 001017 700 KLQNGVPECIDKLAQAGI--KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGI--kv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1189)
++.+++.++++.|++.|+ +++++|+.....+..+...+|+...-..+
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v------------------------------- 190 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGL------------------------------- 190 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEE-------------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceE-------------------------------
Confidence 567899999999999999 99999999998888888888874321111
Q ss_pred HHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CC-CeE
Q 001017 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TS-STT 853 (1189)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~-~~v 853 (1189)
+.+..... .. ..+.-|..+++.+.+. .. +.+
T Consensus 191 -----------------------~~~~~~~~--------------------~~--~~~Kp~~~~~~~~~~~lgi~~~~~~ 225 (282)
T 3nuq_A 191 -----------------------TYCDYSRT--------------------DT--LVCKPHVKAFEKAMKESGLARYENA 225 (282)
T ss_dssp -----------------------ECCCCSSC--------------------SS--CCCTTSHHHHHHHHHHHTCCCGGGE
T ss_pred -----------------------EEeccCCC--------------------cc--cCCCcCHHHHHHHHHHcCCCCcccE
Confidence 10000000 00 1122234444433332 34 789
Q ss_pred EEEcCCCCChhhhhhcCeeEEecCCcch-----hhhhccccccccchhhHHH
Q 001017 854 LAIGDGANDVGMLQEADIGVGISGVEGM-----QAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 854 l~iGDG~ND~~ml~~A~vGI~i~g~~~~-----~a~~~sD~~i~~f~~l~~l 900 (1189)
++|||+.||+.|.++|++|+++...... .....+|+++.++.-|..+
T Consensus 226 i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 226 YFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp EEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred EEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 9999999999999999998766433221 1134789999887776654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00013 Score=79.98 Aligned_cols=41 Identities=29% Similarity=0.165 Sum_probs=36.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 57899999999999999999999999988888888777764
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.43 E-value=5.5e-05 Score=79.28 Aligned_cols=40 Identities=13% Similarity=0.238 Sum_probs=35.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|++. +++.++|+.....+..+.+.+|+.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~ 122 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFM 122 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGG
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChH
Confidence 5789999999999999 999999999988888888888773
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00055 Score=72.87 Aligned_cols=122 Identities=19% Similarity=0.143 Sum_probs=82.0
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
-++.+++.++++.|++. +++.++|+.....+......+|+...-..
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 147 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKD--------------------------------- 147 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhhe---------------------------------
Confidence 35789999999999999 99999999998888888888887432111
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCC----CeEE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS----STTL 854 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~----~~vl 854 (1189)
++.+.... ...-|..+++.+.+..| +.++
T Consensus 148 ---------------------~~~~~~~~--------------------------~~kp~~~~~~~~~~~~g~~~~~~~i 180 (238)
T 3ed5_A 148 ---------------------IFVSEDTG--------------------------FQKPMKEYFNYVFERIPQFSAEHTL 180 (238)
T ss_dssp ---------------------EEEGGGTT--------------------------SCTTCHHHHHHHHHTSTTCCGGGEE
T ss_pred ---------------------EEEecccC--------------------------CCCCChHHHHHHHHHcCCCChhHeE
Confidence 11110000 01112333333332233 6899
Q ss_pred EEcCCC-CChhhhhhcCeeE-EecC-CcchhhhhccccccccchhhHHHH
Q 001017 855 AIGDGA-NDVGMLQEADIGV-GISG-VEGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 855 ~iGDG~-ND~~ml~~A~vGI-~i~g-~~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
+|||+. ||+.|.+.|+++. .+.. ......+..+|+++.++.-+..+|
T Consensus 181 ~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 181 IIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred EECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 999998 9999999999954 4432 212224567899999988887773
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00051 Score=73.65 Aligned_cols=41 Identities=15% Similarity=0.124 Sum_probs=36.7
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 46799999999999999999999999888888888888874
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00017 Score=77.33 Aligned_cols=41 Identities=22% Similarity=0.143 Sum_probs=37.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57899999999999999999999999998888888888874
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00012 Score=79.52 Aligned_cols=42 Identities=14% Similarity=0.066 Sum_probs=37.6
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
.-++.+++.++++.|++.|++++++|+.....+..+.+..|+
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 149 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGL 149 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcCh
Confidence 345789999999999999999999999999888888888886
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00027 Score=75.08 Aligned_cols=120 Identities=16% Similarity=0.155 Sum_probs=79.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++. +++.++|+.....+..+....|+...-..
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~---------------------------------- 144 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS---------------------------------- 144 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce----------------------------------
Confidence 4679999999999999 99999999999888888888887431111
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAI 856 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~i 856 (1189)
++.+... ....| |..+++.+.+. ....+++|
T Consensus 145 --------------------~~~~~~~------------------------~~~kp--~~~~~~~~~~~~~~~~~~~~~v 178 (234)
T 3u26_A 145 --------------------ITTSEEA------------------------GFFKP--HPRIFELALKKAGVKGEEAVYV 178 (234)
T ss_dssp --------------------EEEHHHH------------------------TBCTT--SHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------eEecccc------------------------CCCCc--CHHHHHHHHHHcCCCchhEEEE
Confidence 1110000 00111 12222222222 34789999
Q ss_pred cCCC-CChhhhhhcCe---eEEecCCcchhhhhccccccccchhhHHHH
Q 001017 857 GDGA-NDVGMLQEADI---GVGISGVEGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 857 GDG~-ND~~ml~~A~v---GI~i~g~~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
||+. ||+.|.+.|++ +|++.+. ....+..+|+++.++.-+..+|
T Consensus 179 GD~~~~Di~~a~~aG~~~~~v~~~~~-~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 179 GDNPVKDCGGSKNLGMTSILLDRKGE-KREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp ESCTTTTHHHHHTTTCEEEEECSSST-TGGGGGGCSEEESSTHHHHHHH
T ss_pred cCCcHHHHHHHHHcCCEEEEECCCCC-ccccccCCCEeeCCHHHHHHHH
Confidence 9997 99999999995 4444332 2224558999999988777664
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00026 Score=74.26 Aligned_cols=118 Identities=15% Similarity=0.139 Sum_probs=79.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.||+.++++.|++ |+++.++|+.....+..+-+.+|+...-.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 127 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee-----------------------------------
Confidence 577999999999999 99999999998888888888888743211
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCC---CeEEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAI 856 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~---~~vl~i 856 (1189)
.++++.-.+.-|..+.+.+.+..| +.+++|
T Consensus 128 -----------------------------------------------~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v 160 (210)
T 2ah5_A 128 -----------------------------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp -----------------------------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred -----------------------------------------------eeecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence 113332122335555554444333 679999
Q ss_pred cCCCCChhhhhhcCee-EEec-CCc-chhhh-hccccccccchhhHHH
Q 001017 857 GDGANDVGMLQEADIG-VGIS-GVE-GMQAV-MSSDIAIAQFRFLERL 900 (1189)
Q Consensus 857 GDG~ND~~ml~~A~vG-I~i~-g~~-~~~a~-~~sD~~i~~f~~l~~l 900 (1189)
||+.||+.|.++|++. |++. |.. ....+ ..+|+++.++.-+..+
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 161 GDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred CCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 9999999999999993 2442 222 11122 3589998887665543
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00018 Score=73.33 Aligned_cols=54 Identities=15% Similarity=0.118 Sum_probs=38.5
Q ss_pred CCCeEEEEcCCCCChhhhhhcCee-EEec-CCcchhhh----hccccccccchhhHHHHH
Q 001017 849 TSSTTLAIGDGANDVGMLQEADIG-VGIS-GVEGMQAV----MSSDIAIAQFRFLERLLL 902 (1189)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~A~vG-I~i~-g~~~~~a~----~~sD~~i~~f~~l~~lll 902 (1189)
..+.+++|||+.||+.|.++|++. |++. |....... ..+|+++.++.-+..+|+
T Consensus 117 ~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 117 DLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp CCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 447899999999999999999973 3443 22221122 457999999888877743
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00014 Score=77.35 Aligned_cols=41 Identities=20% Similarity=0.276 Sum_probs=37.3
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH
Confidence 57899999999999999999999999988888888888874
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00032 Score=75.74 Aligned_cols=58 Identities=19% Similarity=0.261 Sum_probs=43.0
Q ss_pred eCCcc--cHHHHHHHHHhcCCCeEEEEcC----CCCChhhhhhcCe-eEEecCCcchhhhhccccc
Q 001017 832 RSSPK--QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEADI-GVGISGVEGMQAVMSSDIA 890 (1189)
Q Consensus 832 r~sP~--qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~A~v-GI~i~g~~~~~a~~~sD~~ 890 (1189)
.+.|. .|+..++.+.....+.|+++|| |.||.+||+.|+. |++|.+. ....+..||++
T Consensus 181 eI~~~~~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na-~~~vk~~A~~v 245 (246)
T 2amy_A 181 DVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP-EDTRRICELLF 245 (246)
T ss_dssp EEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH-HHHHHHHHHHC
T ss_pred EEecCCCchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCC-CHHHHHHHhhc
Confidence 34444 7999888882213478999999 9999999999987 9999654 34488888886
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00018 Score=77.26 Aligned_cols=41 Identities=17% Similarity=0.253 Sum_probs=31.8
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
..++.+++.++++.|++.|+++.++|+.....+...... |+
T Consensus 106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 146 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NF 146 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HS
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hH
Confidence 346789999999999999999999999887666665555 65
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00037 Score=74.25 Aligned_cols=123 Identities=19% Similarity=0.173 Sum_probs=83.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|+ .|+++.++|+.....+..+...+|+...-..
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~---------------------------------- 151 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKK---------------------------------- 151 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSE----------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhcee----------------------------------
Confidence 57899999999999 9999999999988888888888776432111
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCC--cccHHHHHHHHHhcC---CCeEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTKT---SSTTL 854 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~s--P~qK~~iV~~l~~~~---~~~vl 854 (1189)
+ +++... ..-|..+++.+.+.. .+.++
T Consensus 152 --------------------~----------------------------~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 183 (240)
T 3qnm_A 152 --------------------I----------------------------ILSEDLGVLKPRPEIFHFALSATQSELRESL 183 (240)
T ss_dssp --------------------E----------------------------EEGGGTTCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred --------------------E----------------------------EEeccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 1 111111 111233333333223 37899
Q ss_pred EEcCCC-CChhhhhhcCeeEEecCCcch-hhhhccccccccchhhHHHHHHhhhh
Q 001017 855 AIGDGA-NDVGMLQEADIGVGISGVEGM-QAVMSSDIAIAQFRFLERLLLVHGHW 907 (1189)
Q Consensus 855 ~iGDG~-ND~~ml~~A~vGI~i~g~~~~-~a~~~sD~~i~~f~~l~~lll~~GR~ 907 (1189)
+|||+. ||+.|.+.|++++.+.+.... .....+|+++.++.-+..+ .+|+.
T Consensus 184 ~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~--~~~~~ 236 (240)
T 3qnm_A 184 MIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL--LEGHH 236 (240)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH--TC---
T ss_pred EECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH--Hhccc
Confidence 999995 999999999999987544331 2456799999998877765 45543
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00018 Score=77.40 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=33.5
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
-++.+++.++++.|++.|+++.++|+.....+...... |+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 147 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NF 147 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hH
Confidence 46789999999999999999999999887766655555 55
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0001 Score=79.68 Aligned_cols=49 Identities=12% Similarity=0.144 Sum_probs=37.4
Q ss_pred CeEEEEcCCCCChhhhhhcCeeE---EecCCcchhhhhccccccccchhhHHH
Q 001017 851 STTLAIGDGANDVGMLQEADIGV---GISGVEGMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 851 ~~vl~iGDG~ND~~ml~~A~vGI---~i~g~~~~~a~~~sD~~i~~f~~l~~l 900 (1189)
+.+++|||+.||+.|.+.|++.+ +..+. ....+..||+++.++.-+...
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~-~~~~~~~ad~v~~sl~el~~~ 242 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNL-SRDLTTKATLVLNSLQDFQPE 242 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTS-CGGGSTTSSEECSCGGGCCGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCC-chhhcccccEeecCHHHhhHH
Confidence 78999999999999999999654 33322 233678899999987766544
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00045 Score=74.17 Aligned_cols=40 Identities=20% Similarity=0.156 Sum_probs=35.2
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
++.+|+.++++.|++.|+++.++|+.....+..+-..+|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999988878777777776
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00061 Score=70.09 Aligned_cols=41 Identities=22% Similarity=0.259 Sum_probs=37.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCC-hhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDK-METAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~-~~ta~~ia~~~gi~ 740 (1189)
++.+++.++|+.|++.|+++.++||.. ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 578999999999999999999999998 68899898888874
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.002 Score=71.19 Aligned_cols=65 Identities=22% Similarity=0.220 Sum_probs=49.3
Q ss_pred EEeCCc--ccHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccch
Q 001017 830 CCRSSP--KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (1189)
Q Consensus 830 ~~r~sP--~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~ 895 (1189)
+....| ..|...++.+.+..| ..++++||+.||++|++.|++|+++.+.. ...+..||+++.+..
T Consensus 202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~-~~~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNAT-QEAKNLHNLITDSEY 271 (289)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCC-HHHHHHCCCBCSSCH
T ss_pred EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCcc-HHHHHhCCEEcCCCC
Confidence 344444 368888887766433 57999999999999999999999996543 347788999887643
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00069 Score=73.30 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=35.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|+ |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999999888888888874
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00076 Score=72.50 Aligned_cols=121 Identities=9% Similarity=0.016 Sum_probs=82.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++. +++.++|+.....+..+...+|+.- +.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f--------~~---------------------------- 158 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW--------DV---------------------------- 158 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC--------SC----------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe--------eE----------------------------
Confidence 5679999999999997 9999999999888888888888630 00
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcC---CCeEEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAI 856 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~---~~~vl~i 856 (1189)
++.+. .+....| |..+++.+.+.. .+.+++|
T Consensus 159 --------------------~~~~~------------------------~~~~~kp--~~~~~~~~~~~lgi~~~~~~~i 192 (254)
T 3umg_A 159 --------------------IIGSD------------------------INRKYKP--DPQAYLRTAQVLGLHPGEVMLA 192 (254)
T ss_dssp --------------------CCCHH------------------------HHTCCTT--SHHHHHHHHHHTTCCGGGEEEE
T ss_pred --------------------EEEcC------------------------cCCCCCC--CHHHHHHHHHHcCCChHHEEEE
Confidence 00000 0000112 233333333323 3789999
Q ss_pred cCCCCChhhhhhcCeeEEecCCcc---h------hhhhccccccccchhhHHHHHH
Q 001017 857 GDGANDVGMLQEADIGVGISGVEG---M------QAVMSSDIAIAQFRFLERLLLV 903 (1189)
Q Consensus 857 GDG~ND~~ml~~A~vGI~i~g~~~---~------~a~~~sD~~i~~f~~l~~lll~ 903 (1189)
||+.||+.|.+.|++++++-.... . .....+|+++.++.-|..+|..
T Consensus 193 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 193 AAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred eCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 999999999999999998754211 0 0256789999998888877533
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00076 Score=71.32 Aligned_cols=52 Identities=12% Similarity=0.269 Sum_probs=39.1
Q ss_pred CCCeEEEEcCCCCChhhhhhcCee-EEecCCcc------hhhhhc-cccccccchhhHHH
Q 001017 849 TSSTTLAIGDGANDVGMLQEADIG-VGISGVEG------MQAVMS-SDIAIAQFRFLERL 900 (1189)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~A~vG-I~i~g~~~------~~a~~~-sD~~i~~f~~l~~l 900 (1189)
....+++|||+.||+.|++.|+++ |++..... ...+.. +|+++.+..-+..+
T Consensus 159 ~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 159 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred ChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 346899999999999999999998 66654322 113445 89999887776665
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00076 Score=70.89 Aligned_cols=52 Identities=19% Similarity=0.247 Sum_probs=37.2
Q ss_pred CCCeEEEEcCCCCChhhhhhcCee--EEec-CCcc-hhhhhccccccccchhhHHH
Q 001017 849 TSSTTLAIGDGANDVGMLQEADIG--VGIS-GVEG-MQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~A~vG--I~i~-g~~~-~~a~~~sD~~i~~f~~l~~l 900 (1189)
..+.++||||+.||+.|.++|++. |++. |... ......+|+++.++.-+..+
T Consensus 147 ~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~ 202 (211)
T 2gmw_A 147 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 202 (211)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred CHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHH
Confidence 346799999999999999999974 5553 2211 11234589999888777666
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00071 Score=73.75 Aligned_cols=124 Identities=11% Similarity=0.071 Sum_probs=79.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++.|+++.++|+... .+..+...+|+...-..
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~---------------------------------- 150 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDF---------------------------------- 150 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSC----------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhE----------------------------------
Confidence 4779999999999999999999999665 45777777887431110
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
++.+... -...-.|.--..+.+.+.- ....+++|||+
T Consensus 151 --------------------~~~~~~~----------------------~~~Kp~~~~~~~~~~~~g~-~~~~~~~vGD~ 187 (263)
T 3k1z_A 151 --------------------VLTSEAA----------------------GWPKPDPRIFQEALRLAHM-EPVVAAHVGDN 187 (263)
T ss_dssp --------------------EEEHHHH----------------------SSCTTSHHHHHHHHHHHTC-CGGGEEEEESC
T ss_pred --------------------EEeeccc----------------------CCCCCCHHHHHHHHHHcCC-CHHHEEEECCC
Confidence 1110000 0000111112223333322 44789999999
Q ss_pred C-CChhhhhhcCeeEEecCCcch--h---hhhccccccccchhhHHHH
Q 001017 860 A-NDVGMLQEADIGVGISGVEGM--Q---AVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 860 ~-ND~~ml~~A~vGI~i~g~~~~--~---a~~~sD~~i~~f~~l~~ll 901 (1189)
. ||+.|.++|++++.+...... . ....+|+++.++.-|..+|
T Consensus 188 ~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 188 YLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred cHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 7 999999999999877443321 0 1236899999988887774
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00065 Score=73.23 Aligned_cols=119 Identities=11% Similarity=0.036 Sum_probs=80.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.+++.++++.|++. +++.++|+.....+..+...+|+. -..
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~---f~~--------------------------------- 162 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP---WDM--------------------------------- 162 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC---CSE---------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC---cce---------------------------------
Confidence 5679999999999986 999999999888888888888763 000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEEE
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAI 856 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~i 856 (1189)
++.++.. -...-|..+++.+.+. ..+.+++|
T Consensus 163 --------------------~~~~~~~--------------------------~~~kp~~~~~~~~~~~lgi~~~~~~~i 196 (254)
T 3umc_A 163 --------------------LLCADLF--------------------------GHYKPDPQVYLGACRLLDLPPQEVMLC 196 (254)
T ss_dssp --------------------ECCHHHH--------------------------TCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------EEeeccc--------------------------ccCCCCHHHHHHHHHHcCCChHHEEEE
Confidence 0000000 0112233333333322 34789999
Q ss_pred cCCCCChhhhhhcCeeEEecCC---cch----h--hhhccccccccchhhHHHH
Q 001017 857 GDGANDVGMLQEADIGVGISGV---EGM----Q--AVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 857 GDG~ND~~ml~~A~vGI~i~g~---~~~----~--a~~~sD~~i~~f~~l~~ll 901 (1189)
||+.||+.|.+.|++++++... .+. . .+..+|+++.++.-|..+|
T Consensus 197 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 197 AAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred cCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 9999999999999999987541 111 1 2567899999988877763
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0031 Score=67.87 Aligned_cols=40 Identities=18% Similarity=0.143 Sum_probs=34.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|+ .|+++.++|+.....+......+|+.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~ 151 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLS 151 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcH
Confidence 56899999999999 99999999999888777777777763
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00081 Score=71.50 Aligned_cols=53 Identities=8% Similarity=-0.049 Sum_probs=40.5
Q ss_pred CCCeEEEEcCCC-CChhhhhhcCeeEEecCCc----------chhhhhccccccccchhhHHHH
Q 001017 849 TSSTTLAIGDGA-NDVGMLQEADIGVGISGVE----------GMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 849 ~~~~vl~iGDG~-ND~~ml~~A~vGI~i~g~~----------~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
....+++|||+. ||+.|.++|++++.+-... .......+|+++.++.-+..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 171 EKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp CGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred CchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 347899999996 9999999999999874322 1223478999999887776663
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0009 Score=69.40 Aligned_cols=40 Identities=10% Similarity=0.113 Sum_probs=35.5
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
-++.+|+.+ ++.|++. +++.++|+.....+..+...+|+.
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 112 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLL 112 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcH
Confidence 357799999 9999999 999999999988888888888874
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0043 Score=63.17 Aligned_cols=53 Identities=19% Similarity=0.275 Sum_probs=36.4
Q ss_pred EEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHH
Q 001017 605 LLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEK 684 (1189)
Q Consensus 605 l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 684 (1189)
.+.-|..+.|.+. +-...+.....+.++..+|..++.+|
T Consensus 133 ~v~iGn~~~m~~~----gi~i~~~~~~~~~~~~~~G~T~V~va------------------------------------- 171 (185)
T 2kmv_A 133 KVLIGNREWMIRN----GLVINNDVNDFMTEHERKGRTAVLVA------------------------------------- 171 (185)
T ss_dssp EEEEECHHHHHHH----TCCCCHHHHHHHHHHHHTTCEEEEEE-------------------------------------
T ss_pred EEEECCHHHHHHc----CCCCCHHHHHHHHHHHhCCCeEEEEE-------------------------------------
Confidence 4445887766432 11222344556777888999999988
Q ss_pred HhcCceEEEeeeeccc
Q 001017 685 IEKNLILLGATAVEDK 700 (1189)
Q Consensus 685 ie~~l~llG~~~ieD~ 700 (1189)
.|-+++|++++.|+
T Consensus 172 --idg~l~g~iavaD~ 185 (185)
T 2kmv_A 172 --VDDELCGLIAIADT 185 (185)
T ss_dssp --ETTEEEEEEEEECC
T ss_pred --ECCEEEEEEEEEcC
Confidence 56679999999995
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.001 Score=68.16 Aligned_cols=38 Identities=16% Similarity=0.314 Sum_probs=31.9
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
+.+++.++++.|++.|++++++|+... .+..+...+|+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 679999999999999999999998764 45666666666
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0009 Score=73.50 Aligned_cols=40 Identities=15% Similarity=-0.070 Sum_probs=35.3
Q ss_pred cCCCCcHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
.+.+++.++++.|++. |+++.++|+.....+..+....|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4579999999999999 999999999998888877777776
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0053 Score=63.09 Aligned_cols=41 Identities=20% Similarity=0.288 Sum_probs=37.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCCh---hhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKM---ETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~---~ta~~ia~~~gi~ 740 (1189)
++.+|+.++++.|+++|+++.++|+... ..+..+...+|+.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 6889999999999999999999998876 7888888888874
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0016 Score=68.66 Aligned_cols=52 Identities=12% Similarity=0.041 Sum_probs=35.8
Q ss_pred CCeEEEEcCCCCChhhhhhcCeeE--Eec-CCcc-hhhhhccccccccchhhHHHH
Q 001017 850 SSTTLAIGDGANDVGMLQEADIGV--GIS-GVEG-MQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 850 ~~~vl~iGDG~ND~~ml~~A~vGI--~i~-g~~~-~~a~~~sD~~i~~f~~l~~ll 901 (1189)
.+.++||||+.||+.|.+.|++.. .+. |... ......+|+++.++.-+..++
T Consensus 154 ~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l 209 (218)
T 2o2x_A 154 LQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAI 209 (218)
T ss_dssp GGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHH
T ss_pred HHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHH
Confidence 467999999999999999999864 442 2211 112245788887777666653
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.019 Score=62.33 Aligned_cols=42 Identities=10% Similarity=0.098 Sum_probs=33.8
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gi~ 740 (1189)
+++-+++.++|++|+++|++++++|| +..........++|+.
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 33446789999999999999999998 5666666777788874
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.078 Score=57.12 Aligned_cols=40 Identities=13% Similarity=0.091 Sum_probs=35.1
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCcc
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 740 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 740 (1189)
+-+++.++++.+++.|+++.++| |...........++|+-
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66888999999999999999999 99888888888887763
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0019 Score=66.74 Aligned_cols=40 Identities=13% Similarity=0.008 Sum_probs=35.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+++.++++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 36799999999999999 99999999988888888888874
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.007 Score=63.82 Aligned_cols=53 Identities=21% Similarity=0.240 Sum_probs=39.5
Q ss_pred CCCeEEEEcCCC-CChhhhhhcCeeEEecCC--cchhhhhccccccccchhhHHHH
Q 001017 849 TSSTTLAIGDGA-NDVGMLQEADIGVGISGV--EGMQAVMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 849 ~~~~vl~iGDG~-ND~~ml~~A~vGI~i~g~--~~~~a~~~sD~~i~~f~~l~~ll 901 (1189)
....+++|||+. ||+.|.+.|++++.+-.. ........+|+++.++.-|..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 171 DASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred CchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 347899999998 999999999998765221 11112557899999988877763
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.0021 Score=67.04 Aligned_cols=36 Identities=14% Similarity=0.096 Sum_probs=30.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 736 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 736 (1189)
++.+++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 467899999999999 999999999887777666655
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.89 E-value=0.015 Score=63.20 Aligned_cols=43 Identities=14% Similarity=0.031 Sum_probs=35.3
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCcc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLL 740 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gi~ 740 (1189)
.+++-+++.++|++|+++|++++++|| +...........+|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 455667899999999999999999999 5666666667778874
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.013 Score=61.14 Aligned_cols=42 Identities=24% Similarity=0.192 Sum_probs=38.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
++.||+.++++.|++.|+++.++|+-....+..+-+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999999999854
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=95.85 E-value=0.011 Score=64.03 Aligned_cols=40 Identities=23% Similarity=0.290 Sum_probs=35.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.||+.++++.|++ ++++.++|+.....+..+...+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 577999999999998 5999999999998888888888874
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.0015 Score=62.89 Aligned_cols=41 Identities=12% Similarity=0.004 Sum_probs=35.3
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
.++.|++.++++.|++.|+++.++|+.....+..+.+.+|+
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 34678899999999999999999999988887777777766
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.026 Score=58.25 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=30.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 734 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia 734 (1189)
++.+|+.++++.|+++|+++.++||.....+..+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 57899999999999999999999998877664433
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=95.40 E-value=0.085 Score=57.17 Aligned_cols=42 Identities=14% Similarity=0.103 Sum_probs=37.1
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 740 (1189)
+++-+++.++|+.|++.|++++++| |..........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5677899999999999999999999 88888888888888874
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=95.37 E-value=0.0015 Score=67.77 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=26.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETA 730 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta 730 (1189)
++.+++.++++.|++.|++++++|+.....+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~ 121 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 121 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHH
Confidence 5679999999999999999999999765443
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.08 E-value=0.05 Score=58.91 Aligned_cols=41 Identities=15% Similarity=0.207 Sum_probs=35.7
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCccc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLLR 741 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~~ 741 (1189)
.+ +++.++|++|+++|++++++| |...........++|+..
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 45 899999999999999999999 778888888888888843
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.00 E-value=0.075 Score=56.29 Aligned_cols=60 Identities=18% Similarity=0.165 Sum_probs=40.2
Q ss_pred cHHHHHHHHHhcC---CCeEEEEcCC-CCChhhhhhcCeeEEe--cCCcc-hhhh---hccccccccchh
Q 001017 837 QKALVTRLVKTKT---SSTTLAIGDG-ANDVGMLQEADIGVGI--SGVEG-MQAV---MSSDIAIAQFRF 896 (1189)
Q Consensus 837 qK~~iV~~l~~~~---~~~vl~iGDG-~ND~~ml~~A~vGI~i--~g~~~-~~a~---~~sD~~i~~f~~ 896 (1189)
.|...++.+.+.. .+.|+||||+ .||+.|++.|++++++ .|... ...+ ..+|+++.++.-
T Consensus 177 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~e 246 (250)
T 2c4n_A 177 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAE 246 (250)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGG
T ss_pred CCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHH
Confidence 3555666555433 3789999999 7999999999999654 23222 1122 368888877554
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.00 E-value=0.045 Score=57.32 Aligned_cols=40 Identities=18% Similarity=0.136 Sum_probs=34.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+|+.++++.|+++|+++.++|+... .+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 5789999999999999999999999866 466777777764
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.00 E-value=0.035 Score=59.43 Aligned_cols=43 Identities=7% Similarity=0.099 Sum_probs=35.9
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChh----hHHHHHHHcCcc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKME----TAINIGFACSLL 740 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~----ta~~ia~~~gi~ 740 (1189)
+.++.||+.++++.|++.|+++.++||.... .+..-.+++||.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 4678999999999999999999999999754 555556677773
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=94.79 E-value=0.028 Score=62.79 Aligned_cols=42 Identities=19% Similarity=0.283 Sum_probs=37.9
Q ss_pred eecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001017 696 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (1189)
Q Consensus 696 ~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 737 (1189)
.+...+.++..+.++.|+++|++|||+||-..+.+..+|..+
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 344468899999999999999999999999999999999885
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=94.73 E-value=0.03 Score=60.18 Aligned_cols=118 Identities=14% Similarity=0.236 Sum_probs=75.6
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHH
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1189)
..++.|++.++++.|++.|+++.+.|+.. .+..+-+.+|+...-..
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~-------------------------------- 159 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF-------------------------------- 159 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--------------------------------
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--------------------------------
Confidence 34678999999999999999999877653 45666777787432111
Q ss_pred HHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEc
Q 001017 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 857 (1189)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iG 857 (1189)
++++.... ...-.|+-=..+.+.+.- ..+.+++||
T Consensus 160 ----------------------i~~~~~~~----------------------~~KP~p~~~~~a~~~lg~-~p~e~l~VG 194 (250)
T 4gib_A 160 ----------------------IADAGKCK----------------------NNKPHPEIFLMSAKGLNV-NPQNCIGIE 194 (250)
T ss_dssp ----------------------ECCGGGCC----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEE
T ss_pred ----------------------eecccccC----------------------CCCCcHHHHHHHHHHhCC-ChHHeEEEC
Confidence 11111100 001112111223333332 447899999
Q ss_pred CCCCChhhhhhcCe-eEEecCCcchhhhhccccccccchhh
Q 001017 858 DGANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFL 897 (1189)
Q Consensus 858 DG~ND~~ml~~A~v-GI~i~g~~~~~a~~~sD~~i~~f~~l 897 (1189)
|..+|+.+-++|++ .|++...+. ...||+++.++.-|
T Consensus 195 Ds~~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL 232 (250)
T 4gib_A 195 DASAGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQL 232 (250)
T ss_dssp SSHHHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGC
T ss_pred CCHHHHHHHHHcCCEEEEECChhH---hccCCEEECChHhC
Confidence 99999999999998 567754443 34689999887665
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=94.64 E-value=0.062 Score=61.37 Aligned_cols=42 Identities=21% Similarity=0.194 Sum_probs=38.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
++.||+.++++.|+++|+++.++|+.....+..+-...|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999999988888888753
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=94.45 E-value=0.32 Score=51.97 Aligned_cols=63 Identities=13% Similarity=0.095 Sum_probs=40.9
Q ss_pred HHHHHHHHHhcCC---CeEEEEcCCC-CChhhhhhcCee-EEec-CCc-chhh---hhccccccccchhhHHH
Q 001017 838 KALVTRLVKTKTS---STTLAIGDGA-NDVGMLQEADIG-VGIS-GVE-GMQA---VMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 838 K~~iV~~l~~~~~---~~vl~iGDG~-ND~~ml~~A~vG-I~i~-g~~-~~~a---~~~sD~~i~~f~~l~~l 900 (1189)
|..+.+.+.+..| +.+++|||+. ||+.|.+.|++. |.+. |.. ..+. ...+|+++.++.-+..+
T Consensus 181 ~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~ 253 (259)
T 2ho4_A 181 EKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDH 253 (259)
T ss_dssp SHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHH
T ss_pred CHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHH
Confidence 4455555444333 6899999998 999999999985 4553 211 1111 24578888877766655
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=94.18 E-value=0.015 Score=61.48 Aligned_cols=34 Identities=9% Similarity=0.015 Sum_probs=29.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 734 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia 734 (1189)
++.|++.++++.|++. +++.++|+.....+..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHH
Confidence 4668999999999999 999999999988877665
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=94.11 E-value=0.048 Score=58.40 Aligned_cols=43 Identities=14% Similarity=0.063 Sum_probs=35.5
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChh----hHHHHHHHcCcc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKME----TAINIGFACSLL 740 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~----ta~~ia~~~gi~ 740 (1189)
++++.||+.+.++.|++.|+++.++||.... .+..-.++.||.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 5778899999999999999999999999753 555555667773
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=94.04 E-value=0.23 Score=49.36 Aligned_cols=37 Identities=8% Similarity=0.125 Sum_probs=22.3
Q ss_pred EecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEE
Q 001017 607 SKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILA 647 (1189)
Q Consensus 607 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a 647 (1189)
.=|....|-+.-- ...+.....+..+..+|..++.+|
T Consensus 116 ~iGn~~~m~~~gi----~~~~~~~~~~~~~~~~G~T~v~va 152 (165)
T 2arf_A 116 LIGNREWLRRNGL----TISSDVSDAMTDHEMKGQTAILVA 152 (165)
T ss_dssp EEECHHHHHHHHC----SSCHHHHHHHHHHHTTTSEEEEEE
T ss_pred EEcCHHHHHhcCC----CCCHHHHHHHHHHHhCCCeEEEEE
Confidence 3388776643211 112234455667788999999888
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=93.92 E-value=0.11 Score=54.69 Aligned_cols=40 Identities=13% Similarity=0.139 Sum_probs=36.2
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
-++.||+.++++.|++.| ++.++|+-....+..+...+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368999999999999999 9999999988888888888886
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=93.66 E-value=0.026 Score=57.17 Aligned_cols=40 Identities=25% Similarity=0.277 Sum_probs=33.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCC---------------ChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGD---------------KMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD---------------~~~ta~~ia~~~gi 739 (1189)
++.|++.++|+.|++.|+++.++|+- ....+..+....|+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 96 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGV 96 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCC
Confidence 57899999999999999999999997 35566667777776
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=93.33 E-value=0.043 Score=60.78 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=28.6
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhh
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMET 729 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 729 (1189)
++++.+|+.++++.|+++|+++.++||.....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 56778999999999999999999999998654
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=93.14 E-value=0.098 Score=56.38 Aligned_cols=43 Identities=12% Similarity=0.142 Sum_probs=33.5
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhH---HHHHHHcCcc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETA---INIGFACSLL 740 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta---~~ia~~~gi~ 740 (1189)
+.++-|++.++|+.|++.|+++.++||...... ...-..+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 357789999999999999999999999985433 3334556663
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=91.95 E-value=0.57 Score=51.70 Aligned_cols=44 Identities=16% Similarity=0.126 Sum_probs=35.0
Q ss_pred ecccCCCCcHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCcc
Q 001017 697 VEDKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 740 (1189)
Q Consensus 697 ieD~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 740 (1189)
-.+++-+++.++++.|++.|++++++| |..........+.+|+.
T Consensus 34 ~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 34 NGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp ETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred cCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 356677899999999999999999999 46666665666677763
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=91.46 E-value=0.25 Score=53.23 Aligned_cols=38 Identities=16% Similarity=0.230 Sum_probs=33.0
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 736 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 736 (1189)
-++.||+.++++.|+++|+++.++|+-....+..+-..
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~ 166 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH 166 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh
Confidence 46889999999999999999999999988877766553
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=89.97 E-value=0.28 Score=52.09 Aligned_cols=41 Identities=17% Similarity=0.095 Sum_probs=32.8
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
.++.||+.++++.|++.|+++.++|+... +..+-..+|+..
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~ 134 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE 134 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc
Confidence 46789999999999999999999998643 455566777743
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=83.86 E-value=0.37 Score=53.04 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=27.3
Q ss_pred ccCCcccccCcchhhhc---------cCeeEEEeCCCccccccce
Q 001017 401 ETDKPARARTSNLNEEL---------GQVDTILSDKTGTLTCNSM 436 (1189)
Q Consensus 401 ~~~~~i~~~~~~~~E~L---------g~v~~i~~DKTGTLT~n~m 436 (1189)
-.+.++++|++..+|++ .++. |+||||||||+...
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 37788999999998873 3444 67799999998653
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=82.97 E-value=0.49 Score=49.17 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=25.4
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCChhh
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKMET 729 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 729 (1189)
+.+++.++++.|+++|+++.++||.....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 46789999999999999999999987543
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=81.51 E-value=1.9 Score=46.12 Aligned_cols=42 Identities=5% Similarity=0.147 Sum_probs=34.0
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH----cCcc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA----CSLL 740 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~----~gi~ 740 (1189)
++.-+++.++++.|++.|+++.++||....+...++.. +|+.
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 44446888999999999999999999988777777665 7763
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=81.21 E-value=1.4 Score=42.23 Aligned_cols=39 Identities=21% Similarity=0.091 Sum_probs=33.5
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCC---hhhHHHHHHHcCc
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDK---METAINIGFACSL 739 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~---~~ta~~ia~~~gi 739 (1189)
+-+++.++|+.|+++|++++++||+. ...+.....+.|+
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi 66 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL 66 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCC
Confidence 45789999999999999999999997 5667777778887
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=80.76 E-value=1.7 Score=50.14 Aligned_cols=26 Identities=31% Similarity=0.498 Sum_probs=24.4
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCC
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDK 726 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~ 726 (1189)
+-+|+.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1189 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 3e-30 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 4e-20 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-14 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 4e-07 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 6e-06 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 9e-04 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 0.001 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 0.001 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 0.002 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 0.003 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 118 bits (295), Expect = 3e-30
Identities = 39/230 (16%), Positives = 70/230 (30%), Gaps = 35/230 (15%)
Query: 483 GFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFV 542
+ E E + N + D + + + A+C+ + + +E G E A
Sbjct: 28 TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEK-VGEATETALT 86
Query: 543 IAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGT 602
++ E ++S E + + + LEFS RK MSV + +
Sbjct: 87 TLVEKMNVFNTEV--RNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSS 144
Query: 603 -----LLLLSKGADSVMFER-----LAENGREFEEQTKEHINE------YADAGLRTLIL 646
+ KGA + +R + KE I LR L L
Sbjct: 145 RAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL 204
Query: 647 AYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATA 696
A R+ K + ++ + E +L +G
Sbjct: 205 ATRDTPPKREEMVLDD----------------SSRFMEYETDLTFVGVVG 238
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 88.0 bits (217), Expect = 4e-20
Identities = 31/214 (14%), Positives = 66/214 (30%), Gaps = 46/214 (21%)
Query: 499 EPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE--SPDEAAFVIAARELGFEFYERT 556
+ + R+ +C+ A+ + +EN +S E+A +
Sbjct: 28 DKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSV---- 83
Query: 557 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE--EGTLLLLSKGADSVM 614
K+ + + F+S+ K I E + +L+ KGA +
Sbjct: 84 --------------RKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERI 129
Query: 615 FERLA---------ENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTE 665
+R + +E ++ + E G R L L ++ + +
Sbjct: 130 LDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKF--- 186
Query: 666 AKNSVSADREELAEEIAEKIEKNLILLGATAVED 699
D +EL + L +G ++ D
Sbjct: 187 -------DTDEL-----NFPTEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 74.8 bits (183), Expect = 1e-14
Identities = 38/352 (10%), Positives = 81/352 (23%), Gaps = 91/352 (25%)
Query: 560 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLA 619
+ E + + + + L + + + + L + A + + A
Sbjct: 105 MYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDA 164
Query: 620 ENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAE 679
K + A + L + ++ E K F
Sbjct: 165 T-----LFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTF---------------- 203
Query: 680 EIAEKIEKNLILLGATAVEDKLQN--GVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737
G E L+ V ++ L AG +L + TG +
Sbjct: 204 -----------KTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL 252
Query: 738 SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPL 797
LL I ++ ++ + + + P
Sbjct: 253 GLLPYFEADFIATA--------------------------SDVLEAENMYPQARPLGKPN 286
Query: 798 ALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 857
A++ + + + +G
Sbjct: 287 PFSY-----------------------IAALYGNNRDKYESYINKQDNIVNK-DDVFIVG 322
Query: 858 DGANDVGMLQEAD---IGV--GISGVEGMQAVMSS--DIAIAQFRFLERLLL 902
D D+ Q+ IG G+ G + + + D I L +L
Sbjct: 323 DSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLD 374
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 49.0 bits (116), Expect = 4e-07
Identities = 38/209 (18%), Positives = 61/209 (29%), Gaps = 58/209 (27%)
Query: 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 747
+ T D + V I AGI++ ++TGD TAI I R++
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC----------RRI 57
Query: 748 IISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 807
I E E + ++ T
Sbjct: 58 GIFGENEE---------------------------------------------VADRAYT 72
Query: 808 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 867
DD+ A A + +V T GDG ND L+
Sbjct: 73 GREFDDLPLAEQREACRRACCFARVEPSHKSKIVEY--LQSYDEITAMTGDGVNDAPALK 130
Query: 868 EADIGVGISGVEGMQAVMSSDIAIAQFRF 896
+A+IG+ + A +S++ +A F
Sbjct: 131 KAEIGIAMGSGT-AVAKTASEMVLADDNF 158
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.5 bits (109), Expect = 6e-06
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Query: 824 GCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 883
G S + ++ L + + IGDGA D+ AD +G G Q
Sbjct: 141 GFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQ 200
Query: 884 VM-SSDIAIAQFRFL 897
V ++ I F L
Sbjct: 201 VKDNAKWYITDFVEL 215
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 40.8 bits (95), Expect = 9e-04
Identities = 38/276 (13%), Positives = 81/276 (29%), Gaps = 29/276 (10%)
Query: 871 IGVGISGV-EGMQAVMSSDIAIAQFRFLERLLLVH--------GHWCYRRISSMICYFFY 921
+ + ++ + EG+ AV+++ +A+ R ++ +V G Y + I Y
Sbjct: 185 VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLIS 244
Query: 922 KNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGV-------------- 967
N+ +F A L N+ LP ALG
Sbjct: 245 SNVGEVVCIFLTAA---LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRS 301
Query: 968 FDQDVSARFCLKFPL---LYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQA 1024
+ + + + + Y +W + GV + F
Sbjct: 302 PKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHF 361
Query: 1025 FRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGA 1084
E+ T + +V + C S++ + + W I L+
Sbjct: 362 EGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSL 421
Query: 1085 MDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLL 1120
+ + + A + WL+ L + + +
Sbjct: 422 HFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIG 457
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 39.6 bits (91), Expect = 0.001
Identities = 20/181 (11%), Positives = 48/181 (26%), Gaps = 11/181 (6%)
Query: 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESK 757
+ E I + GI + ++TG+ ++ A + + + + +
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 758 TLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDL 817
S D+ + D L+I +++ ++ +
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDR------RAGLVIMRETINVETVREIINE 130
Query: 818 FLELAIGCASVICCRSSPKQKALVTRLVKTK-----TSSTTLAIGDGANDVGMLQEADIG 872
+ S + + K +GDG ND+ +
Sbjct: 131 LNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK 190
Query: 873 V 873
V
Sbjct: 191 V 191
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 39.7 bits (91), Expect = 0.001
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 853 TLAIGDGANDVGMLQEADIGVGISG 877
TL +GDG ND +L+ D V + G
Sbjct: 206 TLGLGDGPNDAPLLEVMDYAVIVKG 230
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 39.3 bits (90), Expect = 0.002
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 808 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK--TSSTTLAIGDGANDVGM 865
E+ + + ++ +G +S K KA L K + A+GD ND M
Sbjct: 152 DGWEEVLVEGGFKVTMGSRFYTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPM 211
Query: 866 LQEADIGV 873
+ D
Sbjct: 212 FEVVDKVF 219
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 37.0 bits (85), Expect = 0.003
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKME 728
+ D L+ + +L + GIK+ ++TGD
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWR 49
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1189 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.93 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.89 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.89 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.84 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.83 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.76 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.46 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.25 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.86 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.85 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.8 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.67 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.66 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.65 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.59 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.49 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.46 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.44 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.42 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.41 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.33 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.29 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.14 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.13 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.98 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.98 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.42 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.36 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.26 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 96.96 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.92 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.58 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.55 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.1 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.03 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 95.64 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.63 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 95.29 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.27 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.03 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.86 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 94.75 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.57 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 93.01 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 92.7 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 92.16 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 91.74 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 91.44 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 90.97 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 90.89 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 90.06 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 89.66 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 87.07 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 86.75 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 84.26 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 82.51 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.93 E-value=4.8e-27 Score=235.53 Aligned_cols=148 Identities=22% Similarity=0.322 Sum_probs=121.2
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
||+|++++++|+.|+++||++||+|||+..||.++|++|||+.++..+.
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~------------------------------- 67 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA------------------------------- 67 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCT-------------------------------
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccc-------------------------------
Confidence 9999999999999999999999999999999999999999987653210
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcC
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGD 858 (1189)
...++|..++.....+..+...+ ..+|+|++|+||..+|+.+|+ .|++|+|+||
T Consensus 68 -------------------~~~~~~~~~~~~~~~~~~~~~~~------~~v~ar~~p~~K~~lv~~l~~-~g~~Va~vGD 121 (168)
T d1wpga2 68 -------------------DRAYTGREFDDLPLAEQREACRR------ACCFARVEPSHKSKIVEYLQS-YDEITAMTGD 121 (168)
T ss_dssp -------------------TTEEEHHHHHHSCHHHHHHHHHH------CCEEESCCHHHHHHHHHHHHH-TTCCEEEEEC
T ss_pred -------------------cccccccccchhhHHHHhhhhhh------hhhhhccchhHHHHHHHHHHh-cccceeEEec
Confidence 01455555555444444444442 349999999999999999999 8999999999
Q ss_pred CCCChhhhhhcCeeEEecCCcchhhhhcccccccc--chhhHHHHHHhh
Q 001017 859 GANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHG 905 (1189)
Q Consensus 859 G~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~--f~~l~~lll~~G 905 (1189)
|.||++||++|||||+++ +....|+++||+++.+ |..+..+ +.+|
T Consensus 122 G~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~-I~~G 168 (168)
T d1wpga2 122 GVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAA-VEEG 168 (168)
T ss_dssp SGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHH-HHHH
T ss_pred CCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHH-HHcC
Confidence 999999999999999995 4444589999999998 4446666 6666
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.89 E-value=4.6e-24 Score=204.70 Aligned_cols=120 Identities=24% Similarity=0.310 Sum_probs=101.6
Q ss_pred cCceEEEeeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHH
Q 001017 687 KNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKS 766 (1189)
Q Consensus 687 ~~l~llG~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~ 766 (1189)
-|.+..+.++++|++|++++++|+.|+++||++||+|||+.++|.++|++|||-.
T Consensus 8 ~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~------------------------- 62 (135)
T d2b8ea1 8 FDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------------------------- 62 (135)
T ss_dssp EECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------------------------
T ss_pred ECCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh-------------------------
Confidence 3555667899999999999999999999999999999999999999999999821
Q ss_pred HHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHH
Q 001017 767 AAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVK 846 (1189)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~ 846 (1189)
++++++|++|..+++.+|
T Consensus 63 --------------------------------------------------------------v~~~~~p~~k~~~v~~~q 80 (135)
T d2b8ea1 63 --------------------------------------------------------------VIAEVLPHQKSEEVKKLQ 80 (135)
T ss_dssp --------------------------------------------------------------EECSCCHHHHHHHHHHHT
T ss_pred --------------------------------------------------------------hccccchhHHHHHHHHHH
Confidence 899999999999999998
Q ss_pred hcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchh
Q 001017 847 TKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 896 (1189)
Q Consensus 847 ~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~ 896 (1189)
+ ++.|+|+|||.||++||++|||||++.+.. ..++++||+++.+.++
T Consensus 81 ~--~~~v~~vGDg~nD~~aL~~Advgia~~~~~-~~~~~aADivl~~~~l 127 (135)
T d2b8ea1 81 A--KEVVAFVGDGINDAPALAQADLGIAVGSGS-DVAVESGDIVLIRDDL 127 (135)
T ss_dssp T--TSCEEEEECSSSSHHHHHHSSEEEEECCC---------SEEESSCCT
T ss_pred c--CCEEEEEeCCCCcHHHHHhCCeeeecCccC-HHHHHhCCEEEECCCH
Confidence 6 579999999999999999999999996543 3489999999988544
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.89 E-value=1e-24 Score=229.87 Aligned_cols=170 Identities=17% Similarity=0.199 Sum_probs=123.7
Q ss_pred hHHHHHHHHHHhhhcceeccccCCCCcEE--EEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEE
Q 001017 502 ADVIQKFLRLLAICHTALPEVDEENGKIS--YEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSL 579 (1189)
Q Consensus 502 ~~~~~~~~~~lalC~~~~~~~~~~~~~~~--~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~i 579 (1189)
....+.++.++++||++....++...... ...++|.|.||+.+|.+.|..... .+..+++
T Consensus 31 ~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~------------------~r~~~~~ 92 (214)
T d1q3ia_ 31 SPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK------------------MRDRNPK 92 (214)
T ss_dssp SHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHH------------------HHHTSCE
T ss_pred CHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHH------------------HHhhCcE
Confidence 45567889999999998765443211110 125899999999999987764321 2356788
Q ss_pred eeeecCCCCCceEEEEEEeC--CCeEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHHHhccCeEEEEEE
Q 001017 580 LNVLEFSSSRKRMSVIVRSE--EGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAY 648 (1189)
Q Consensus 580 l~~~~F~s~rkrmsviv~~~--~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~Glr~l~~a~ 648 (1189)
+..+||+|+||||++|++.+ ++++++|+|||||.|+++|+.. +++.++.+.+.+++|+.+|+|||++||
T Consensus 93 v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~ 172 (214)
T d1q3ia_ 93 VAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQ 172 (214)
T ss_dssp EEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred eeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEEE
Confidence 99999999999999999986 4578999999999999999742 456788899999999999999999999
Q ss_pred EecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCCC
Q 001017 649 RELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNG 704 (1189)
Q Consensus 649 r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~~ 704 (1189)
|+++.+++..|... +.+ ..+.+|+||+|+|++||+||+|++
T Consensus 173 k~l~~~~~~~~~~~----------~~~-----~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 173 LNLPSGKFPRGFKF----------DTD-----ELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEECTTTSCTTCCC----------CTT-----TTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EecCcccccccccc----------Chh-----hhhhhcCCCEEEEEEEEEeCCCCC
Confidence 99998766543211 110 114567999999999999999975
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.84 E-value=2.5e-26 Score=264.61 Aligned_cols=333 Identities=13% Similarity=0.050 Sum_probs=210.1
Q ss_pred hhhhccCeeEEEeCCCccccccceEEEEEEEcCeecCCCchHHHHHHHHhcCCCCccchhhhhccccccCCCCcCChhhh
Q 001017 413 LNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIM 492 (1189)
Q Consensus 413 ~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 492 (1189)
..|.||...++|+|||||+|.|.|.++.+. .. ...... +.
T Consensus 32 s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~------~~---~il~~~-k~------------------------------ 71 (380)
T d1qyia_ 32 DKCYLGLHSHIDWETLTDNDIQDIRNRIFQ------KD---KILNKL-KS------------------------------ 71 (380)
T ss_dssp CTTTTCCSCCCCGGGCCHHHHHHHHHHHHT------TT---HHHHHH-HH------------------------------
T ss_pred chhhcccceeeecCcccchhhhhheeeeec------ch---hhhHhh-hh------------------------------
Confidence 348899999999999999999999763211 00 000000 00
Q ss_pred cCCCCCCCchHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcc
Q 001017 493 NGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTK 572 (1189)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~ 572 (1189)
.+.++ . -++....++|+.+..... .++|++.+++..++..+..+. .
T Consensus 72 --~g~n~----~-~dl~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~------------------~ 117 (380)
T d1qyia_ 72 --LGLNS----N-WDMLFIVFSIHLIDILKK---------LSHDEIEAFMYQDEPVELKLQ------------------N 117 (380)
T ss_dssp --TTCCC----H-HHHHHHHHHHHHHHHHTT---------SCHHHHHHHHHCSSCHHHHHT------------------T
T ss_pred --cCCCh----h-HHHHHHHHHHHHHHHHhh---------cCCCcHHHHHHHHhhccchHH------------------H
Confidence 00000 0 134455666775432211 357788888765432221110 1
Q ss_pred eeEEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEecCchHHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecC
Q 001017 573 VERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELD 652 (1189)
Q Consensus 573 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~ 652 (1189)
....+.....+||++.+|+|+++....++.+..+.||+++.+.. .......+...+..++.+|+|++++|++..+
T Consensus 118 ~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~ 192 (380)
T d1qyia_ 118 ISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHV-----SDATLFSLKGALWTLAQEVYQEWYLGSKLYE 192 (380)
T ss_dssp SGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTC-----SCCGGGSTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcCC-----cHHHHHHHHhHHHHHHHHHHHHHHHhhhccc
Confidence 12445556678999999999988766555555666676655421 1122344566788899999999998865443
Q ss_pred HHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeeecccCCC--CcHHHHHHHHHcCCeEEEEcCCChhhH
Q 001017 653 EKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQN--GVPECIDKLAQAGIKLWVLTGDKMETA 730 (1189)
Q Consensus 653 ~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~ieD~lr~--~v~~~I~~L~~aGIkv~mlTGD~~~ta 730 (1189)
..+ .....+....|+++.+|+++| |++++|+.|+++||+++|+|||+..+|
T Consensus 193 ~~~---------------------------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a 245 (380)
T d1qyia_ 193 DVE---------------------------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTET 245 (380)
T ss_dssp HHH---------------------------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred ccc---------------------------cccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 221 122245566799999999776 999999999999999999999999999
Q ss_pred HHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhh
Q 001017 731 INIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYAL 810 (1189)
Q Consensus 731 ~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~ 810 (1189)
..+++++||...-.....+.+.. . ..... ........ +
T Consensus 246 ~~il~~lgl~~~F~~~~i~~~~d-------------~--------~~~~~-~~~~~~~~-------------~------- 283 (380)
T d1qyia_ 246 VVPFENLGLLPYFEADFIATASD-------------V--------LEAEN-MYPQARPL-------------G------- 283 (380)
T ss_dssp HHHHHHHTCGGGSCGGGEECHHH-------------H--------HHHHH-HSTTSCCC-------------C-------
T ss_pred HHHHHHcCCcccCCcceEEecch-------------h--------hhhhh-hccccccc-------------c-------
Confidence 99999999965221111111000 0 00000 00000000 0
Q ss_pred hHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcC---eeEEec--CCcch--hh
Q 001017 811 EDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD---IGVGIS--GVEGM--QA 883 (1189)
Q Consensus 811 ~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~---vGI~i~--g~~~~--~a 883 (1189)
.+ ....+.. ...++|++|.+|..+++.++. .++.|+|||||.||++|++.|| |||+++ |.+.. .+
T Consensus 284 KP-~p~~~~~------~~~~~~~~~~~k~~iv~~~~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~ 355 (380)
T d1qyia_ 284 KP-NPFSYIA------ALYGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELE 355 (380)
T ss_dssp TT-STHHHHH------HHHCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHH
T ss_pred CC-ChHHHHH------HHHHcCCCHHHHHHHHHHhCC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHH
Confidence 00 0011111 126889999999999999988 8899999999999999999999 899763 33321 12
Q ss_pred hhccccccccchhhHHHH
Q 001017 884 VMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 884 ~~~sD~~i~~f~~l~~ll 901 (1189)
...||+++.++..+.++|
T Consensus 356 ~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 356 AHHADYVINHLGELRGVL 373 (380)
T ss_dssp HTTCSEEESSGGGHHHHH
T ss_pred hCCCCEEECCHHHHHHHH
Confidence 237999999988887764
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.83 E-value=2.5e-21 Score=207.48 Aligned_cols=178 Identities=21% Similarity=0.231 Sum_probs=127.5
Q ss_pred chHHHHHHHHHHhhhcceeccccCCCCcEEEEcCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEe
Q 001017 501 HADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLL 580 (1189)
Q Consensus 501 ~~~~~~~~~~~lalC~~~~~~~~~~~~~~~~~~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il 580 (1189)
..+.++.++.++++||++....++..+.. ...++|+|.||+.+|.+.|+.......... ...........+..|+++
T Consensus 46 ~~~~l~~ll~~~~LCn~a~l~~~~~~~~~-~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v 122 (239)
T d1wpga3 46 QFDGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNVFNTEVRNLSK--VERANACNSVIRQLMKKE 122 (239)
T ss_dssp GCHHHHHHHHHHHHSCSCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCTTCCCCSSSCH--HHHTTHHHHHHHHHEEEE
T ss_pred ccHHHHHHHHHHHhcCCCEeeecCCCCeE-EEcCCCCcHHHHHHHHHhCCChHHhhccch--hhhhccchhhhhhhCeEE
Confidence 34567889999999999887665544433 456899999999999999875432111000 000000000123578999
Q ss_pred eeecCCCCCceEEEEEEeCCC-----eEEEEEecCchHHHHHhhhc---------chhhHHHHHHHHHHH--HhccCeEE
Q 001017 581 NVLEFSSSRKRMSVIVRSEEG-----TLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEY--ADAGLRTL 644 (1189)
Q Consensus 581 ~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~--a~~Glr~l 644 (1189)
+.+||||+|||||||++.+++ .+++|+|||||.|+++|... +++.++.+.+.++++ +++|+|||
T Consensus 123 ~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvL 202 (239)
T d1wpga3 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 202 (239)
T ss_dssp EEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred EEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEE
Confidence 999999999999999998765 36899999999999999742 356677778888876 67999999
Q ss_pred EEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEEEeeee
Q 001017 645 ILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAV 697 (1189)
Q Consensus 645 ~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~llG~~~i 697 (1189)
++|||+++.++...+. .+. ...+.+|+||+|+|++||
T Consensus 203 a~A~k~~~~~~~~~~~-----------~~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 203 ALATRDTPPKREEMVL-----------DDS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEEESSCCCGGGCCT-----------TCG-----GGHHHHTCSEEEEEEEEE
T ss_pred EEEEEECCcccccccc-----------cch-----hhHHHhcCCCEEEEEECC
Confidence 9999999865432111 011 013578999999999996
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.76 E-value=2.5e-19 Score=165.31 Aligned_cols=107 Identities=23% Similarity=0.261 Sum_probs=83.3
Q ss_pred eEEEEecCCeE--EEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcceecccccccccCCCcc
Q 001017 139 KVKVHCGEGAF--DYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDS 216 (1189)
Q Consensus 139 ~~~v~~r~g~~--~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~~~K~~~~~~~~~~~~~ 216 (1189)
.++|+ |+|++ ++|++++|+|||||.|++||.+||||+||.+.. +.++||||+||||+.|+.|.+.+....
T Consensus 2 ~~kV~-R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~--~~l~vdes~lTGEs~pv~K~~~~~~~~----- 73 (115)
T d1wpga1 2 MGKVY-RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGESVSVIKHTEPVPDP----- 73 (115)
T ss_dssp EEEEE-BSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCCEEECHHHHSCCSCEECCCSCCCCT-----
T ss_pred ceEEE-ECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeec--cceEEEEeecccceEEEEeeccccccc-----
Confidence 57899 99874 789999999999999999999999999997532 128999999999999999987543210
Q ss_pred ccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccceec
Q 001017 217 NFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ 283 (1189)
Q Consensus 217 ~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk~~~ 283 (1189)
........|++|+||.+.+ |.++++|++||.+|.+++
T Consensus 74 -----------------------------~~~~~~~~n~lf~GT~V~~-G~~~~~V~~tG~~T~~G~ 110 (115)
T d1wpga1 74 -----------------------------RAVNQDKKNMLFSGTNIAA-GKALGIVATTGVSTEIGK 110 (115)
T ss_dssp -----------------------------TCCGGGCTTEECTTCEEEE-CEEEEEEEECGGGSHHHH
T ss_pred -----------------------------ccccccccceEEeccEEEe-eeEEEEEEEEccccHHHH
Confidence 1111234566666666653 569999999999997653
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.46 E-value=5.2e-13 Score=156.80 Aligned_cols=215 Identities=15% Similarity=0.092 Sum_probs=165.1
Q ss_pred hhhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhHHHHhhhhcccCCChHHHhhCccc
Q 001017 904 HGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLL 983 (1189)
Q Consensus 904 ~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~sg~~~~~~~~~l~~n~i~~~lp~~~l~~~~~~~~~~~~~~~P~l 983 (1189)
.||..+.|+.+.+.|.+..|+..++..+++.++. ..+++++.|++|.|++++.+|+++++.++ ++++.+.+.|+
T Consensus 227 ~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~---~p~pl~~~qILwinli~d~lpaiaL~~ep--~d~~iM~~~Pr- 300 (472)
T d1wpga4 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG---LPEALIPVQLLWVNLVTDGLPATALGFNP--PDLDIMDRPPR- 300 (472)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCSCCHHHHHHHHHTTTHHHHHHHTTCC--CCSGGGGSCCC-
T ss_pred HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcC---CCccccHHHHHHHHHHhHHHHHHHHhcCC--CchhhhcCCCC-
Confidence 4999999999999999999999999998888765 45679999999999999999999999754 44445555555
Q ss_pred hhccccccccchhhhhhhhhhhHHHHHHHHHHHHHhhcccccc---------------C--------CCceeehhhhhhH
Q 001017 984 YQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFR---------------K--------GGEVIGLEILGTT 1040 (1189)
Q Consensus 984 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~--------~g~~~~~~~~~~~ 1040 (1189)
++++.+++..++..++..|++.+++++.++++.+...... . +..........|+
T Consensus 301 ---~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~ 377 (472)
T d1wpga4 301 ---SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTM 377 (472)
T ss_dssp ---CTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHH
T ss_pred ---CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHH
Confidence 6778999999999999999999888877666654321000 0 0111122345788
Q ss_pred HHHHHHHHHHHHHHH-hcccc-----hhhHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHH
Q 001017 1041 MYTCVVWVVNCQMAL-SVTYF-----TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLV 1114 (1189)
Q Consensus 1041 ~f~~~v~~~n~~~~l-~~~~~-----t~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ll~ 1114 (1189)
+|+++++.+.++.+. +++.. .++.+..++.++++.+++++++.++|.. +. +|+..+.++..|+.++.+
T Consensus 378 ~F~~lv~~q~~~~~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l-~~-----vf~~~pL~~~~w~i~l~~ 451 (472)
T d1wpga4 378 ALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPL-PM-----IFKLKALDLTQWLMVLKI 451 (472)
T ss_dssp HHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTT-HH-----HHTCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhHH-HH-----HHcccCCCHHHHHHHHHH
Confidence 898888877666542 22222 2456778888888888888888888853 33 677888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 001017 1115 LMSSLLPYFTYSAIQMRFF 1133 (1189)
Q Consensus 1115 ~~~~l~~~~~~k~~~~~~~ 1133 (1189)
++++++.+++.|+++|+|.
T Consensus 452 ~~~~~~~~El~K~~~R~~~ 470 (472)
T d1wpga4 452 SLPVIGLDEILKFIARNYL 470 (472)
T ss_dssp HTHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhhcCC
Confidence 9999999999999988764
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.25 E-value=1.2e-12 Score=153.59 Aligned_cols=215 Identities=15% Similarity=0.131 Sum_probs=147.8
Q ss_pred chhhcccCCCCceEecCCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcccc--CCC----CCCccchhhhhhHHHHHhhH
Q 001017 47 SFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP--LSP----YSAVSNVLPLVVVIGATMGK 120 (1189)
Q Consensus 47 ~~~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~~~~fl~~~il~~~~--~~~----~~~~~~~~~l~~vl~~s~i~ 120 (1189)
+.++|+++||+|+++.++...+. +.+++||+++++++++++++++++. ..+ ...+...+.+++++++++..
T Consensus 28 ea~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~I~~vv~~n~~i 104 (472)
T d1wpga4 28 QVKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIV 104 (472)
T ss_dssp HHHHHHHHSCCSSCCCCCCCCHH---HHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTSTTSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHHHHhcccccchhHhHhhhhhheeeeeeeE
Confidence 34778899999999998866554 8899999999999999999999874 111 12445566677888888888
Q ss_pred HHHHHHHHhhhhHHHhcceEEEEecCCeEEEeecccCccccEEEeccCCcCCccEEEeecccCCceEEEEecCCCCCCcc
Q 001017 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNL 200 (1189)
Q Consensus 121 ~~~~d~~~~~~~~~~n~~~~~v~~r~g~~~~i~~~~l~vGDII~l~~ge~iPaD~vlL~~s~~~g~~~Vd~s~LtGEs~~ 200 (1189)
..++++|..++...+++-... ...||.
T Consensus 105 ~~~qe~~a~~~~~~l~~~~~~-----------------------~~~~~~------------------------------ 131 (472)
T d1wpga4 105 GVWQERNAENAIEALKEYEPA-----------------------ATEQDK------------------------------ 131 (472)
T ss_dssp HHHHHHSCCCHHHHHGGGSCC-----------------------CCCCCC------------------------------
T ss_pred EeEEechHHHHHHHHhhhccc-----------------------cccccC------------------------------
Confidence 899888877766555431000 012233
Q ss_pred eecccccccccCCCccccccceEEEEeecCCCCceeeEEEEEEcCccccCCCCcccccCceeecCCeEEEEEEEeccccc
Q 001017 201 KLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTK 280 (1189)
Q Consensus 201 ~~K~~~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~n~l~rgs~l~nt~~~~gvVv~tG~~Tk 280 (1189)
T Consensus 132 -------------------------------------------------------------------------------- 131 (472)
T d1wpga4 132 -------------------------------------------------------------------------------- 131 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccccccccCCCCCCccCchhhHHHHHHH
Q 001017 281 VFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360 (1189)
Q Consensus 281 ~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (1189)
.|.|+++++....+.....+++.+............... ..|.. ..+..
T Consensus 132 ------------~P~d~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----------------~~~~~ 180 (472)
T d1wpga4 132 ------------TPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHG---GSWIR----------------GAIYY 180 (472)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCCSS---SCSSS----------------CGGGH
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHH----------------HHHHH
Confidence 344444444444333333333333322211111100000 01110 11236
Q ss_pred HHHHHHHHhccccchhHHHHHHHHHHHHHHHhccccccccccCCcccccCcchhhhccCeeEEEeCCC--ccccccceEE
Q 001017 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKT--GTLTCNSMEF 438 (1189)
Q Consensus 361 ~~~~l~l~~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~E~Lg~v~~i~~DKT--GTLT~n~m~~ 438 (1189)
+..++++.+.++|++||++++++.++++.+| +++++++|+..++|++|+..+.|+||| +|||.|.+++
T Consensus 181 ~~~ai~l~V~~iPEgLp~~vti~La~~~~rm----------ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v 250 (472)
T d1wpga4 181 FKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEV 250 (472)
T ss_dssp HHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhChhhHHHHHHHHHHHHHHHH----------HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHH
Confidence 7778899999999999999999999999999 899999999999999999999999998 9999998776
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.86 E-value=2.5e-09 Score=111.43 Aligned_cols=132 Identities=19% Similarity=0.261 Sum_probs=93.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
+++||+.++|+.|++.|++++++||.....+..+++.+|+-..+ ++. +.-
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~a-n~~--------------------------- 131 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFA-NRL--------------------------- 131 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEE-ECE---------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eee-eee---------------------------
Confidence 47899999999999999999999999999999999999984321 110 000
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc-CCCeEEEEcC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK-TSSTTLAIGD 858 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~-~~~~vl~iGD 858 (1189)
....+|....... .-....+..|+.+++.+++. .-+.++++||
T Consensus 132 ------------------~~~~~G~~~g~~~------------------~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGD 175 (217)
T d1nnla_ 132 ------------------KFYFNGEYAGFDE------------------TQPTAESGGKGKVIKLLKEKFHFKKIIMIGD 175 (217)
T ss_dssp ------------------EECTTSCEEEECT------------------TSGGGSTTHHHHHHHHHHHHHCCSCEEEEES
T ss_pred ------------------eeeehhcccccee------------------eeeeeccchHHHHHHHHHhccCccccEEEEe
Confidence 0000011000000 00013456799999998764 2357999999
Q ss_pred CCCChhhhhhcCeeEEecCCcc-hhhhhccccccccchhh
Q 001017 859 GANDVGMLQEADIGVGISGVEG-MQAVMSSDIAIAQFRFL 897 (1189)
Q Consensus 859 G~ND~~ml~~A~vGI~i~g~~~-~~a~~~sD~~i~~f~~l 897 (1189)
|.||++|++.|++|||+.++.. .+.++.+|+++.+|..|
T Consensus 176 s~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 176 GATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp SHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred CHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 9999999999999999976543 34567799999887754
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.85 E-value=9.4e-10 Score=115.59 Aligned_cols=181 Identities=12% Similarity=0.122 Sum_probs=99.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccC----CceEEEEeCCCCcccccchhhHHHHHHHHHHHh
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ----GMRQVIISSETPESKTLEKSEDKSAAAAALKAS 775 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (1189)
.+.+.+.++|++|+++|++++++||+....+..++..+++-.. +...+.............. .. .....
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~---~~----~~~~~ 91 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDE---EW----ILWNE 91 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSH---HH----HHHHH
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccH---HH----HHHHH
Confidence 4778899999999999999999999999999999998886321 1111111111100001111 00 11111
Q ss_pred HHHHHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhcc---ceeEEEeC--CcccHHHHHHHHHhcC-
Q 001017 776 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGC---ASVICCRS--SPKQKALVTRLVKTKT- 849 (1189)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~---~~vv~~r~--sP~qK~~iV~~l~~~~- 849 (1189)
+............. ......+.+........ ..++.+.++.... ....+..+ ....|...++.+.+..
T Consensus 92 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~ 165 (230)
T d1wr8a_ 92 IRKRFPNARTSYTM---PDRRAGLVIMRETINVE---TVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG 165 (230)
T ss_dssp HHHHCTTCCBCTTG---GGCSSCEEECTTTSCHH---HHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT
T ss_pred HHHhcccccceeec---ccceeeEEEecccccHH---HHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccc
Confidence 11111111111110 11122223322222111 1111111111110 00112222 3357999888877643
Q ss_pred --CCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 850 --SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 850 --~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
.+.|+++|||.||++|++.|++||+|++.. ..++..||+++...
T Consensus 166 i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~-~~~k~~A~~v~~~~ 211 (230)
T d1wr8a_ 166 IKPKEVAHVGDGENDLDAFKVVGYKVAVAQAP-KILKENADYVTKKE 211 (230)
T ss_dssp SCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHTTCSEECSSC
T ss_pred cchhheeeeecCccHHHHHHHCCeEEEECCCC-HHHHHhCCEEECCC
Confidence 367999999999999999999999996554 44899999998753
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.80 E-value=2.3e-09 Score=115.85 Aligned_cols=193 Identities=12% Similarity=0.102 Sum_probs=105.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCC------c---ccccchhhHHHHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETP------E---SKTLEKSEDKSAAAA 770 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~------~---~~~~~~~~~~~~~~~ 770 (1189)
++.+.+.++|++|+++||+++++||++...+..+.+++++..+....+..++... . ...+...........
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~~ 100 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKL 100 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHHH
Confidence 4778899999999999999999999999999999999998765544444333211 0 011111111111110
Q ss_pred HHHHhH----------------------HHHHhhhhhcc-c---cCCC-CCCCeEEEEcCchhhhhhhHHHHHHHHHHHh
Q 001017 771 ALKASV----------------------LHQLIRGKELL-D---SSNE-SLGPLALIIDGKSLTYALEDDVKDLFLELAI 823 (1189)
Q Consensus 771 ~~~~~~----------------------~~~~~~~~~~~-~---~~~~-~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~ 823 (1189)
...... ........... . .... ......+.++......-....+.+.+.....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (271)
T d1rkqa_ 101 SREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 180 (271)
T ss_dssp HHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHEE
T ss_pred HHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcceE
Confidence 000000 00000000000 0 0000 1112233333332221111122222221110
Q ss_pred cc-ceeEEEeCCcc--cHHHHHHHHHhcC---CCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 824 GC-ASVICCRSSPK--QKALVTRLVKTKT---SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 824 ~~-~~vv~~r~sP~--qK~~iV~~l~~~~---~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.. ...-+...+|. +|+..++.+.+.. ...|+++|||.||.+|++.|+.|++|++.. ..++..||++...
T Consensus 181 ~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~-~~lk~~a~~i~~~ 255 (271)
T d1rkqa_ 181 VLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAI-PSVKEVANFVTKS 255 (271)
T ss_dssp EEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECCC
T ss_pred EEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCC-HHHHHhCCEEcCC
Confidence 00 00012345555 6999999988753 357999999999999999999999996544 4488999998764
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.67 E-value=2.8e-08 Score=107.04 Aligned_cols=62 Identities=19% Similarity=0.147 Sum_probs=51.5
Q ss_pred EeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 831 CRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 831 ~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
..++|. .|+..++.+.++.| ..|+++|||.||.+||+.|+.||+|++.. .++++.||++...
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~-~~lk~~A~~v~~~ 248 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAA-ENIKQIARYATDD 248 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCC-HHHHHHCSEECCC
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCC-HHHHHhCCEEcCC
Confidence 456665 69999999877543 57999999999999999999999996543 4489999999875
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.66 E-value=1.1e-08 Score=107.00 Aligned_cols=174 Identities=15% Similarity=0.130 Sum_probs=99.1
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeC------CCCcccccchhhHHHHHHHH
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISS------ETPESKTLEKSEDKSAAAAA 771 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~------~~~~~~~~~~~~~~~~~~~~ 771 (1189)
+.++.+++.++++.|++.|++++++||++...+..++...|+-. ..+..++ ..........+....
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~---~~i~~~G~~~~~~~~~~~~~~~~~~~~~----- 89 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNEGTNK----- 89 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSHHHHH-----
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc---eEEeecceEEEeCCccEEEecChHHHHH-----
Confidence 45577899999999999999999999999999999998888632 2221111 111111111111111
Q ss_pred HHHhHHHHHhhhhh--ccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeE-----EEeCCc--ccHHHHH
Q 001017 772 LKASVLHQLIRGKE--LLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVI-----CCRSSP--KQKALVT 842 (1189)
Q Consensus 772 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv-----~~r~sP--~qK~~iV 842 (1189)
.......... .............+.++....+ .+..........+ ++...| ..|+..+
T Consensus 90 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai 156 (225)
T d1l6ra_ 90 ----FLEEMSKRTSMRSILTNRWREASTGFDIDPEDVD---------YVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAV 156 (225)
T ss_dssp ----HHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHH---------HHHHHHHTTTEEEEEETTEEEEEETTCSHHHHH
T ss_pred ----HHHHHHHhcCcceeecccceeeeeccccCHHHHH---------HHHHHHhhcCcEEEECCcEEEecCCccchHHHH
Confidence 1111111000 0000000111222222222221 2222222222222 233444 3799999
Q ss_pred HHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 843 RLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 843 ~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
+.+.+..| ..|+++|||.||.+|++.|++||+|++... .++..||++...
T Consensus 157 ~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~-~~k~~ad~v~~~ 209 (225)
T d1l6ra_ 157 NKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD-NIKAVSDFVSDY 209 (225)
T ss_dssp HHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCH-HHHHHCSEECSC
T ss_pred HHHhhhhccchhheeeecCCcchHHHHHHCCeEEEECCCcH-HHHHhCCEEECC
Confidence 87765433 679999999999999999999999965443 488999998765
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.65 E-value=2.6e-08 Score=99.08 Aligned_cols=113 Identities=17% Similarity=0.149 Sum_probs=84.9
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHHhhhhhc
Q 001017 707 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 786 (1189)
Q Consensus 707 ~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1189)
..|+.|+..|+.+.++||+....+...+.++++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 47999999999999999999999999999988732
Q ss_pred cccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEEEcCCCCCh
Q 001017 787 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDV 863 (1189)
Q Consensus 787 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~iGDG~ND~ 863 (1189)
++. ....|...++.+.+. ....|+++|||.||.
T Consensus 74 ------------------------------------------~~~--~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl 109 (177)
T d1k1ea_ 74 ------------------------------------------FFL--GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDL 109 (177)
T ss_dssp ------------------------------------------EEE--SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred ------------------------------------------ccc--ccccHHHHHHHHHHHhcCCcceeEEecCCccHH
Confidence 111 123455555444332 347899999999999
Q ss_pred hhhhhcCeeEEecCCcchhhhhcccccccc------chhhHHHHH-Hhhhhhh
Q 001017 864 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLL-VHGHWCY 909 (1189)
Q Consensus 864 ~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~------f~~l~~lll-~~GR~~~ 909 (1189)
+||+.|++|+++.++.. .++..||++... .+-+..+|+ ..|+|.+
T Consensus 110 ~~l~~~g~siap~nA~~-~vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~~~ 161 (177)
T d1k1ea_ 110 PAFAACGTSFAVADAPI-YVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 161 (177)
T ss_dssp HHHHHSSEEEECTTSCH-HHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHhhCCeEEEcCCccH-HHHHhCCEEeCCCCCCchHHHHHHHHHHHCCChHH
Confidence 99999999999976544 489999999975 444555544 4577654
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.59 E-value=4.3e-08 Score=106.41 Aligned_cols=62 Identities=23% Similarity=0.286 Sum_probs=51.5
Q ss_pred EeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 831 CRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 831 ~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
..++|. .|+..++.+.++.| ..|+++|||.||.+||+.|+.||+|.+.. .+++..||++...
T Consensus 205 ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~-~~~k~~A~~v~~~ 271 (285)
T d1nrwa_ 205 FELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAR-EDIKSIADAVTLT 271 (285)
T ss_dssp EEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCC-HHHHHHCSEECCC
T ss_pred EEEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCC-HHHHHhCCEEcCC
Confidence 345665 79999999987644 67999999999999999999999996544 4489999998864
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.49 E-value=4e-07 Score=92.96 Aligned_cols=129 Identities=19% Similarity=0.124 Sum_probs=88.2
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
+..++....++.+ +.+.++.++|+.-...........++..............
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------- 121 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc--------------------------
Confidence 4566777777665 5789999999999999999998888754221111111110
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
.........+.-+...++.++- ..+.|+|||||
T Consensus 122 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~i-~~~eviaiGDg 154 (206)
T d1rkua_ 122 ----------------------------------------------RVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDS 154 (206)
T ss_dssp ----------------------------------------------CEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECS
T ss_pred ----------------------------------------------ccccccccchhhHHHHHHHhcc-cccceEEecCC
Confidence 1112333344445566666665 77899999999
Q ss_pred CCChhhhhhcCeeEEecCCcchhhhhccccccc-cchhhHHHHHH
Q 001017 860 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA-QFRFLERLLLV 903 (1189)
Q Consensus 860 ~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~-~f~~l~~lll~ 903 (1189)
.||++||+.||+|||| ++.....++++||+.. ++.-+...++.
T Consensus 155 ~NDi~Ml~~Ag~gIAm-na~~~v~~~~~~~~~~~~~~d~~~~~~~ 198 (206)
T d1rkua_ 155 YNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLK 198 (206)
T ss_dssp STTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHHH
T ss_pred ccCHHHHHhCCccEEE-CCCHHHHHhCCCceeecCHHHHHHHHHH
Confidence 9999999999999999 5544446688899764 46667766443
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.46 E-value=4.1e-07 Score=94.77 Aligned_cols=40 Identities=8% Similarity=0.078 Sum_probs=37.9
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 739 (1189)
.+.+.+.++|++|+++|++++++||+....+..+..++++
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~ 60 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 60 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhcc
Confidence 4778999999999999999999999999999999999987
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.44 E-value=3e-08 Score=106.73 Aligned_cols=63 Identities=24% Similarity=0.345 Sum_probs=51.5
Q ss_pred EeCCcc--cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 831 CRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 831 ~r~sP~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
..++|. .|+..++.+.++.+ ..|++||||.||.+||+.|++||+|++.. ..++..||+++...
T Consensus 182 ~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~-~~~k~~A~~i~~~~ 249 (267)
T d1nf2a_ 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAI-EKVKEASDIVTLTN 249 (267)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSC-HHHHHHCSEECCCT
T ss_pred eeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCC-HHHHHhCCEEcCCC
Confidence 346665 79999998877533 57999999999999999999999996544 44899999998753
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.42 E-value=1.6e-07 Score=101.50 Aligned_cols=56 Identities=16% Similarity=0.234 Sum_probs=47.2
Q ss_pred cHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 837 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 837 qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.|+..++.+.+..+ ..|+++|||.||.+||+.|++||+|++.. ..++..||++...
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~-~~~k~~a~~v~~~ 265 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANAT-DSAKSHAKCVLPV 265 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCC-HHHHHHSSEECSS
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCC-HHHHHhCCEEECC
Confidence 79888888876533 68999999999999999999999996544 4489999999864
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.41 E-value=1.7e-07 Score=100.13 Aligned_cols=61 Identities=26% Similarity=0.375 Sum_probs=49.5
Q ss_pred eCCcc--cHHHHHHHHHhcC---CCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhcccccccc
Q 001017 832 RSSPK--QKALVTRLVKTKT---SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (1189)
Q Consensus 832 r~sP~--qK~~iV~~l~~~~---~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~ 893 (1189)
.+.|. .|+..++.+.++. ...++++|||.||++||+.|+.||+|.+... .+++.||++...
T Consensus 179 ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~-~lk~~A~~vt~~ 244 (260)
T d2rbka1 179 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKE-DVKAAADYVTAP 244 (260)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCC
T ss_pred EEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCH-HHHHhCCEEeCC
Confidence 34454 7999999887653 3689999999999999999999999975543 388999998665
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.33 E-value=6.4e-07 Score=94.14 Aligned_cols=43 Identities=7% Similarity=0.008 Sum_probs=38.9
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
.+...+.+.++|++|+++|++++++||+....+..+.+++++-
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 4556678999999999999999999999999999999999873
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.29 E-value=5.6e-07 Score=93.63 Aligned_cols=136 Identities=13% Similarity=0.099 Sum_probs=91.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCce-EEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMR-QVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
+++|++.++++.|++.|+++.++||-....+..+.+++|+...-.. ...+.....
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~------------------------ 130 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYI------------------------ 130 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBC------------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcc------------------------
Confidence 4789999999999999999999999999999999999887532100 011111000
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcC
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGD 858 (1189)
...+... ....++...|..|..+++.++. .+..|++|||
T Consensus 131 ---------------------~~~~~~~-------------------~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iGD 169 (226)
T d2feaa1 131 ---------------------HIDWPHS-------------------CKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGD 169 (226)
T ss_dssp ---------------------EEECTTC-------------------CCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEEC
T ss_pred ---------------------eeccccc-------------------cccccccCCHHHHHHHHHHhcC-CCceEEEEeC
Confidence 0000000 0113456788899999999877 7789999999
Q ss_pred CCCChhhhhhcCeeEEecCCcchhhhhcc-ccccccchhhHHH
Q 001017 859 GANDVGMLQEADIGVGISGVEGMQAVMSS-DIAIAQFRFLERL 900 (1189)
Q Consensus 859 G~ND~~ml~~A~vGI~i~g~~~~~a~~~s-D~~i~~f~~l~~l 900 (1189)
+.||.+|+++||+++++.+....-..... ...+.+|+-+...
T Consensus 170 s~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~ 212 (226)
T d2feaa1 170 SVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKE 212 (226)
T ss_dssp CGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHH
T ss_pred chhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHH
Confidence 99999999999999998542221111222 3344556655544
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.14 E-value=2.3e-06 Score=90.08 Aligned_cols=55 Identities=24% Similarity=0.314 Sum_probs=44.7
Q ss_pred cccHHHHHHHHHhcCC---CeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccc
Q 001017 835 PKQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIA 890 (1189)
Q Consensus 835 P~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~ 890 (1189)
...|+..++.+.+..| ..|+++|||.||.+||+.|+.||+|.+.... +++.||.+
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~-lk~~a~~~ 217 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPE-LLHWYDQW 217 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHH-HHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHH-HHHHhhcc
Confidence 3479999999887644 5699999999999999999999999654443 67777754
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.13 E-value=1.9e-06 Score=87.91 Aligned_cols=122 Identities=20% Similarity=0.198 Sum_probs=82.1
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
.++.+++.+.++.++..|..+.++||.....+.....+.++...-.........
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 127 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG-------------------------- 127 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccc--------------------------
Confidence 478899999999999999999999999999999888887764321111111000
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEe--CCcccHHHHHHHHHhc---CCCeE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR--SSPKQKALVTRLVKTK---TSSTT 853 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r--~sP~qK~~iV~~l~~~---~~~~v 853 (1189)
. ....... ..+..|...+..+... ....+
T Consensus 128 -------------------------~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (210)
T d1j97a_ 128 -------------------------K---------------------LTGDVEGEVLKENAKGEILEKIAKIEGINLEDT 161 (210)
T ss_dssp -------------------------E---------------------EEEEEECSSCSTTHHHHHHHHHHHHHTCCGGGE
T ss_pred -------------------------c---------------------ccccccccccccccccchhhhHHHHhcccccce
Confidence 0 0001111 1112233333333321 34679
Q ss_pred EEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccc
Q 001017 854 LAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (1189)
Q Consensus 854 l~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f 894 (1189)
+|+|||.||++|++.|++||||.+.+. .+..||+++...
T Consensus 162 i~iGDs~nDi~m~~~ag~~va~na~~~--lk~~Ad~vi~~~ 200 (210)
T d1j97a_ 162 VAVGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEKR 200 (210)
T ss_dssp EEEESSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSS
T ss_pred EEecCCcChHHHHHHCCCCEEECCCHH--HHHhCCEEEcCC
Confidence 999999999999999999999954443 678899999754
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.98 E-value=8.3e-06 Score=84.26 Aligned_cols=65 Identities=17% Similarity=0.202 Sum_probs=47.7
Q ss_pred EEeCCcc--cHHHHHHHHHhcCCCeEEEEcCCCCChhhhhhcCeeEEecCCcchhhhhccccccccchhhHH
Q 001017 830 CCRSSPK--QKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLER 899 (1189)
Q Consensus 830 ~~r~sP~--qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A~vGI~i~g~~~~~a~~~sD~~i~~f~~l~~ 899 (1189)
+..+.|. .|+..++.+.+ ...++++||+.||.+|++.|+.|++|...+ +..+|++.+.+-.-+..
T Consensus 150 ~idi~p~g~~Kg~al~~l~~--~~~~i~~GDs~ND~~Mf~~~~~~~av~~g~---~~~~A~~~~~~~~ev~~ 216 (229)
T d1u02a_ 150 IIELRVPGVNKGSAIRSVRG--ERPAIIAGDDATDEAAFEANDDALTIKVGE---GETHAKFHVADYIEMRK 216 (229)
T ss_dssp EEEEECTTCCHHHHHHHHHT--TSCEEEEESSHHHHHHHHTTTTSEEEEESS---SCCCCSEEESSHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHhc--cccceeecCCCChHHHHhccCCeEEEEeCC---CCccCeEEcCCHHHHHH
Confidence 3455554 79999999986 467899999999999999997777664222 24578888876444333
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.98 E-value=5.7e-06 Score=86.23 Aligned_cols=54 Identities=15% Similarity=0.270 Sum_probs=46.1
Q ss_pred cHHHHHHHHHhcCCCeEEEEcC----CCCChhhhhhcC-eeEEecCCcchhhhhcccccc
Q 001017 837 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDIAI 891 (1189)
Q Consensus 837 qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~A~-vGI~i~g~~~~~a~~~sD~~i 891 (1189)
.|+..++.|.+.....|+++|| |.||.+||++|+ .|++|++.+.. ++..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~-~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT-VQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH-HHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHH-HHHHHHhcC
Confidence 7999999998766688999999 569999999997 69999766554 888888876
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.42 E-value=6.9e-05 Score=77.68 Aligned_cols=51 Identities=22% Similarity=0.365 Sum_probs=38.8
Q ss_pred cHHHHHHHHHhcCCCeEEEEcC----CCCChhhhhhcC-eeEEecCCcchhhhhcccc
Q 001017 837 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDI 889 (1189)
Q Consensus 837 qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~A~-vGI~i~g~~~~~a~~~sD~ 889 (1189)
+|+..++.|.+...+.|+++|| |.||.+||+.|+ .|+++++.+. .++.+|.
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~--~~~~~~~ 240 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED--TRRICEL 240 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH--HHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH--HHHHHHH
Confidence 7999888887656689999999 889999999997 6888866544 5555543
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.36 E-value=9.8e-05 Score=69.41 Aligned_cols=107 Identities=17% Similarity=0.297 Sum_probs=76.3
Q ss_pred cCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEecCch
Q 001017 533 AESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADS 612 (1189)
Q Consensus 533 ~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~ 612 (1189)
++||..+|++++|++.+...... ..+.-....||...++...+.+ +| ..+..|++.
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~g~~~---~g--~~v~~G~~~ 84 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERD-------------------VQSLHATFVPFTAQSRMSGINI---DN--RMIRKGSVD 84 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCC-------------------TTTTTCEEEEEETTTTEEEEEE---TT--EEEEEECHH
T ss_pred CCchHHHHHHHHHHHhcCCCccc-------------------cccccccccccccccceEEEEE---CC--EEEEecHHH
Confidence 68999999999999765322110 1111122345555554433332 44 355679999
Q ss_pred HHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhcHHHHHHHHHHHHhcCceEE
Q 001017 613 VMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILL 692 (1189)
Q Consensus 613 ~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a~r~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~~l~ll 692 (1189)
.|.+.+...+.....++.+.++.++.+|.+++.+| .|-+++
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va---------------------------------------~d~~~~ 125 (136)
T d2a29a1 85 AIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRVL 125 (136)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEE---------------------------------------ETTEEE
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEE---------------------------------------ECCEEE
Confidence 88887776655667788899999999999999999 677899
Q ss_pred EeeeecccCC
Q 001017 693 GATAVEDKLQ 702 (1189)
Q Consensus 693 G~~~ieD~lr 702 (1189)
|++++.|++|
T Consensus 126 G~i~l~D~iK 135 (136)
T d2a29a1 126 GVIALKDIVK 135 (136)
T ss_dssp EEEEEEESSC
T ss_pred EEEEEEeecC
Confidence 9999999986
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.26 E-value=0.00014 Score=74.45 Aligned_cols=124 Identities=20% Similarity=0.161 Sum_probs=83.1
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHH
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1189)
++.++++++++.|++.|+++.++||.....+..+.+++||...-...+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~-------------------------------- 142 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEML-------------------------------- 142 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccc--------------------------------
Confidence 568999999999999999999999999999999999999853221111
Q ss_pred HhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhcCCCeEEEEcCC
Q 001017 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (1189)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~~~~~vl~iGDG 859 (1189)
.+... -...-.|+--..+.+.++- ....+++|||.
T Consensus 143 ----------------------~~~~~----------------------~~~kp~p~~~~~~~~~~~~-~~~~~~~igD~ 177 (224)
T d2hsza1 143 ----------------------GGQSL----------------------PEIKPHPAPFYYLCGKFGL-YPKQILFVGDS 177 (224)
T ss_dssp ----------------------CTTTS----------------------SSCTTSSHHHHHHHHHHTC-CGGGEEEEESS
T ss_pred ----------------------ccccc----------------------ccccccchhhHHHHHHhhh-hhhccchhcCc
Confidence 00000 0001112222233333332 55789999999
Q ss_pred CCChhhhhhcCe-eEEecC---CcchhhhhccccccccchhhHHH
Q 001017 860 ANDVGMLQEADI-GVGISG---VEGMQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 860 ~ND~~ml~~A~v-GI~i~g---~~~~~a~~~sD~~i~~f~~l~~l 900 (1189)
.+|+.+-+.|++ .|++.. .........+|+++.+++-|.++
T Consensus 178 ~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 178 QNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp HHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHh
Confidence 999999999997 556631 11112344689999888877654
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.96 E-value=0.0013 Score=69.48 Aligned_cols=46 Identities=15% Similarity=0.293 Sum_probs=41.7
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCce
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMR 745 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~ 745 (1189)
+||+|+++.++.|++.|+++.++||--......++++.|+...+..
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~ 180 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVK 180 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCce
Confidence 4899999999999999999999999999999999999998655433
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=96.92 E-value=0.00075 Score=68.52 Aligned_cols=42 Identities=14% Similarity=0.149 Sum_probs=38.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
++.||+.++++.|+++|+++.++||.....+..+.+..|+..
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~ 129 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD 129 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 356999999999999999999999999999999999999843
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.58 E-value=0.0021 Score=64.64 Aligned_cols=118 Identities=15% Similarity=0.109 Sum_probs=81.8
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHH
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1189)
.++.+++.++++.|+..+ ++.++|+.....+..+....|+...-.
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd---------------------------------- 127 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFD---------------------------------- 127 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccc----------------------------------
Confidence 467899999999999775 899999999999999999999853211
Q ss_pred HHhhhhhccccCCCCCCCeEEEEcCchhhhhhhHHHHHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc---CCCeEEE
Q 001017 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLA 855 (1189)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~---~~~~vl~ 855 (1189)
.++.+.-.+..|..+...+.+. ..+.+++
T Consensus 128 ------------------------------------------------~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~ 159 (210)
T d2ah5a1 128 ------------------------------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAII 159 (210)
T ss_dssp ------------------------------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred ------------------------------------------------ccccccccccccccccchhhhhhhccccccee
Confidence 1233333344444444444433 3468999
Q ss_pred EcCCCCChhhhhhcCe-eEEec-CCcc--hhhhhccccccccchhhHH
Q 001017 856 IGDGANDVGMLQEADI-GVGIS-GVEG--MQAVMSSDIAIAQFRFLER 899 (1189)
Q Consensus 856 iGDG~ND~~ml~~A~v-GI~i~-g~~~--~~a~~~sD~~i~~f~~l~~ 899 (1189)
|||+.+|+.|-++|++ .|++. |... ......+|+++.++.-|..
T Consensus 160 VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~ 207 (210)
T d2ah5a1 160 IGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred ecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 9999999999999998 66764 2211 1122347898887665543
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.55 E-value=0.00075 Score=69.15 Aligned_cols=42 Identities=24% Similarity=0.209 Sum_probs=37.8
Q ss_pred cCCCCcHHHHHHHHHcC-CeEEEEcCCChhhHHHHHHHcCccc
Q 001017 700 KLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aG-Ikv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
++-||+.++++.|++.| +++.++||.....+..+.+..||..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~ 133 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 133 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc
Confidence 45689999999999987 8999999999999999999999854
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.10 E-value=0.0021 Score=64.29 Aligned_cols=40 Identities=20% Similarity=0.201 Sum_probs=33.6
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.||+.++++.|++.|+++.++|+... .+..+-+..|+.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~ 121 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVE 121 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCG
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccc
Confidence 4679999999999999999999998654 556677778874
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.03 E-value=0.0018 Score=67.44 Aligned_cols=41 Identities=32% Similarity=0.294 Sum_probs=38.1
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+|+.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~ 139 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 139 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc
Confidence 58899999999999999999999999999999998888874
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.64 E-value=0.013 Score=59.37 Aligned_cols=40 Identities=18% Similarity=0.103 Sum_probs=35.5
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.||+.++++.|+ +|+++.++|+-.......+.+.+|+.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~ 139 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIK 139 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCG
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccc
Confidence 46799999999996 58999999999888888999998884
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.63 E-value=0.0068 Score=59.54 Aligned_cols=40 Identities=15% Similarity=0.284 Sum_probs=33.2
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
++.+|++++++.|++.|+++.++|+-.... ..+-+..++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccc
Confidence 567999999999999999999999976544 4566777764
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=95.29 E-value=0.013 Score=57.31 Aligned_cols=52 Identities=19% Similarity=0.247 Sum_probs=38.2
Q ss_pred CCCeEEEEcCCCCChhhhhhcCee--EEec-CCcc-hhhhhccccccccchhhHHH
Q 001017 849 TSSTTLAIGDGANDVGMLQEADIG--VGIS-GVEG-MQAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~A~vG--I~i~-g~~~-~~a~~~sD~~i~~f~~l~~l 900 (1189)
..+.++||||..+|+.|=++|+++ +.+. |... ......||+++.++.-+..+
T Consensus 124 ~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 124 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred ccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 346799999999999999999995 3443 3221 22445699999998877765
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.27 E-value=0.0033 Score=62.97 Aligned_cols=41 Identities=12% Similarity=0.220 Sum_probs=36.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
++.||+.++++.|+ +++++.++|+-....+..+.+..|+..
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~ 122 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMM 122 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGG
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccc
Confidence 46699999999997 579999999999999999999998853
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.03 E-value=0.023 Score=54.28 Aligned_cols=40 Identities=20% Similarity=0.233 Sum_probs=31.0
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCCh-hhHHHHHHHcCc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKM-ETAINIGFACSL 739 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~-~ta~~ia~~~gi 739 (1189)
++.||+.++++.|++.|+++.++|+-+. ..+...-+..++
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~ 86 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDL 86 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccc
Confidence 5789999999999999999999997554 445544454444
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.86 E-value=0.026 Score=57.74 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=35.5
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
+-||+.++++.|++ |++++++|+.........-+.+|+..
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~ 149 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS 149 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccc
Confidence 56899999999985 89999999999999899889999854
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=94.75 E-value=0.016 Score=59.16 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=38.4
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 740 (1189)
.-.+.||+.++++.|++.|+++.++|+............+|+.
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~ 167 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 167 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence 3456899999999999999999999999999888888888874
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.57 E-value=0.0039 Score=58.83 Aligned_cols=30 Identities=23% Similarity=0.263 Sum_probs=28.0
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCCh
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKM 727 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~ 727 (1189)
+|++.+++.+.++.|+++|+++.++||...
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRES 63 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcH
Confidence 678999999999999999999999999874
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=93.01 E-value=0.23 Score=50.52 Aligned_cols=36 Identities=6% Similarity=0.158 Sum_probs=31.2
Q ss_pred CCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001017 702 QNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (1189)
Q Consensus 702 r~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 737 (1189)
=+++.++|+.|+++|++++++|+....+...++..+
T Consensus 20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 378899999999999999999998888877777654
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=92.70 E-value=0.24 Score=50.41 Aligned_cols=46 Identities=15% Similarity=0.204 Sum_probs=32.4
Q ss_pred eeeecccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHH---HHHcCc
Q 001017 694 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINI---GFACSL 739 (1189)
Q Consensus 694 ~~~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~i---a~~~gi 739 (1189)
++.-.+++=+++.++|+.|+++|++++++|+....+...+ -+++|+
T Consensus 13 TL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~ 61 (250)
T d2c4na1 13 VLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGV 61 (250)
T ss_dssp TTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTC
T ss_pred eeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccc
Confidence 3334455557999999999999999999996554443333 445676
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=92.16 E-value=0.15 Score=50.50 Aligned_cols=26 Identities=27% Similarity=0.330 Sum_probs=23.7
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCC
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGD 725 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD 725 (1189)
++-||+.++|+.|+++|+++.++|..
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred EecccHHHHHHHHHhhCCeEEEeccc
Confidence 46799999999999999999999963
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=91.74 E-value=0.082 Score=52.54 Aligned_cols=42 Identities=19% Similarity=0.268 Sum_probs=37.2
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
.+.+++.++++.|++.|+++.++|+-....+.......++..
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~ 134 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD 134 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccc
Confidence 457899999999999999999999999998888888877754
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=91.44 E-value=0.71 Score=46.87 Aligned_cols=52 Identities=19% Similarity=0.245 Sum_probs=35.9
Q ss_pred CCCeEEEEcCCC-CChhhhhhcCe-eEEec-CCcc-h---hhhhccccccccchhhHHH
Q 001017 849 TSSTTLAIGDGA-NDVGMLQEADI-GVGIS-GVEG-M---QAVMSSDIAIAQFRFLERL 900 (1189)
Q Consensus 849 ~~~~vl~iGDG~-ND~~ml~~A~v-GI~i~-g~~~-~---~a~~~sD~~i~~f~~l~~l 900 (1189)
..+.++||||.. +|+.+-++|++ +|.+. |... . .+....|+++.+..-|.++
T Consensus 201 ~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 201 PKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp CGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred CchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 457899999995 69999999998 66652 3211 1 1112348999887776665
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=90.97 E-value=0.056 Score=53.96 Aligned_cols=42 Identities=14% Similarity=0.108 Sum_probs=35.0
Q ss_pred cccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 001017 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (1189)
Q Consensus 698 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 741 (1189)
..++-||+.++++.|++.|+++.++|+... +...-...|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 456889999999999999999999999754 566777778754
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=90.89 E-value=0.53 Score=47.70 Aligned_cols=39 Identities=8% Similarity=0.068 Sum_probs=30.5
Q ss_pred ccCCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001017 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (1189)
Q Consensus 699 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 737 (1189)
+.+=|++.++|+.|+++|++++++|+....+...+++.+
T Consensus 17 ~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l 55 (253)
T d1wvia_ 17 KDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEML 55 (253)
T ss_dssp TEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 344488999999999999999999987666655555543
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=90.06 E-value=0.073 Score=52.13 Aligned_cols=42 Identities=12% Similarity=0.134 Sum_probs=34.2
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCCh----hhHHHHHHHcCcccC
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKM----ETAINIGFACSLLRQ 742 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~----~ta~~ia~~~gi~~~ 742 (1189)
+.+++.+.++.+++.|++|+.+||+.. .|+.++-+.+|+...
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~ 132 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPAT 132 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcc
Confidence 457999999999999999999999854 467777777887543
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=89.66 E-value=0.17 Score=44.54 Aligned_cols=76 Identities=22% Similarity=0.329 Sum_probs=49.4
Q ss_pred cCChhHHHHHHHHHHCCcEEEEecCceeEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEeCCCeEEEEEecCch
Q 001017 533 AESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADS 612 (1189)
Q Consensus 533 ~~sp~e~alv~~a~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~ 612 (1189)
+.||..+|+++++++.+..+..-+ .....+|+|++. ..+++ |.+.
T Consensus 26 S~HPlA~AIv~~a~~~~~~~~~~~-------~~~~~~G~Gi~g-------------------------~~v~v---G~~~ 70 (113)
T d2b8ea2 26 SEHPIAEAIVKKALEHGIELGEPE-------KVEVIAGEGVVA-------------------------DGILV---GNKR 70 (113)
T ss_dssp CCSHHHHHHHHHHHTTTCCCCCCS-------CEEEETTTEEEE-------------------------TTEEE---ECHH
T ss_pred CCCchHHHHHHHHHHhcCCCCccc-------cceeeccceEEe-------------------------EEEEE---CcHH
Confidence 689999999999999886543211 111123444332 11222 7776
Q ss_pred HHHHHhhhcchhhHHHHHHHHHHHHhccCeEEEEE
Q 001017 613 VMFERLAENGREFEEQTKEHINEYADAGLRTLILA 647 (1189)
Q Consensus 613 ~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~a 647 (1189)
.+.+. +-...+.+.+.++.+..+|..++.+|
T Consensus 71 ~~~~~----~~~~~~~~~~~~~~~~~~G~T~v~va 101 (113)
T d2b8ea2 71 LMEDF----GVAVSNEVELALEKLEREAKTAVIVA 101 (113)
T ss_dssp HHHHT----TCCCCHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHhc----CCCCCHHHHHHHHHHHhCCCeEEEEE
Confidence 66442 22345677888999999999999999
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=87.07 E-value=1.6 Score=42.48 Aligned_cols=160 Identities=13% Similarity=0.108 Sum_probs=85.8
Q ss_pred CCCCcHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccCCceEEEEeCCCCcccccchhhHHHHHHHHHHHhHHHHH
Q 001017 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 780 (1189)
Q Consensus 701 lr~~v~~~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1189)
+-||+.++++.+++. ...+++|---..-+.++|...|+-. .... ..-..+...+........+... + -+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~---e~~~-T~~~lD~~~~p~ee~e~ll~i~--~----~~ 150 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRG---ELHG-TEVDFDSIAVPEGLREELLSII--D----VI 150 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCS---EEEE-EBCCGGGCCCCHHHHHHHHHHH--H----HH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCc---eeec-ccccccccCCChHHHHHHHHHh--h----hc
Confidence 569999999999877 5677777777788999999999832 1211 1111111122111111111100 0 00
Q ss_pred hhhhhccccCCCCCCCeEEEEcCchhhhhhhHHH-HHHHHHHHhccceeEEEeCCcccHHHHHHHHHhc-CCCeEEEEcC
Q 001017 781 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDV-KDLFLELAIGCASVICCRSSPKQKALVTRLVKTK-TSSTTLAIGD 858 (1189)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~-~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~l~~~-~~~~vl~iGD 858 (1189)
..+ ++..+..++.+-+ +-...+++..-++| --..|+.+++..-+. .-...+.|||
T Consensus 151 ~d~------------------~~eel~e~~d~~f~~~e~~~i~e~Vk~V-----Ggg~k~~i~~~~~~~~~~~~~~~VGD 207 (308)
T d1y8aa1 151 ASL------------------SGEELFRKLDELFSRSEVRKIVESVKAV-----GAGEKAKIMRGYCESKGIDFPVVVGD 207 (308)
T ss_dssp HHC------------------CHHHHHHHHHHHHHSHHHHHHHHTCBCC-----CHHHHHHHHHHHHHHHTCSSCEEEEC
T ss_pred cCc------------------cHHHHHHHHHHHhccchHhhHHhhhccc-----CCchhHHHHHhhcccccCCcceeccC
Confidence 000 0011111111100 01122333333333 124577777655432 2244599999
Q ss_pred CCCChhhhhhc----CeeEEecCCcchhhhhccccccccchh
Q 001017 859 GANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQFRF 896 (1189)
Q Consensus 859 G~ND~~ml~~A----~vGI~i~g~~~~~a~~~sD~~i~~f~~ 896 (1189)
+..|+.||+.| ++.|+..|++- |...||+++..-+.
T Consensus 208 SITDve~Lr~~r~~gGlaIsFNGN~Y--al~eA~VaiiS~~~ 247 (308)
T d1y8aa1 208 SISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIISPTA 247 (308)
T ss_dssp SGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEECSST
T ss_pred ccccHHHHHHHhcCCCeeEEecCccc--cccccceEEeccch
Confidence 99999999988 45556667776 88999999886433
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=86.75 E-value=0.2 Score=49.68 Aligned_cols=53 Identities=13% Similarity=0.295 Sum_probs=38.7
Q ss_pred CCCeEEEEcCCCCChhhhhhcCe-eEEecCCcch---hh----hhccccccccchhhHHHH
Q 001017 849 TSSTTLAIGDGANDVGMLQEADI-GVGISGVEGM---QA----VMSSDIAIAQFRFLERLL 901 (1189)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~A~v-GI~i~g~~~~---~a----~~~sD~~i~~f~~l~~ll 901 (1189)
..+.+++|||..+|+.+=+.|++ .|++.+.... ++ ..-+|+++.+++-|..+|
T Consensus 157 ~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 157 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred CCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 44789999999999999999998 4577543211 11 123899999988887663
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.26 E-value=0.25 Score=48.75 Aligned_cols=26 Identities=12% Similarity=0.244 Sum_probs=23.4
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCC
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGD 725 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD 725 (1189)
++.+++.++++.|+++|+++.++|+-
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~ 122 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNN 122 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCccHHHHHHHHHhcCCceEEeecc
Confidence 46789999999999999999999963
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=82.51 E-value=0.41 Score=44.94 Aligned_cols=26 Identities=35% Similarity=0.454 Sum_probs=23.8
Q ss_pred cCCCCcHHHHHHHHHcCCeEEEEcCC
Q 001017 700 KLQNGVPECIDKLAQAGIKLWVLTGD 725 (1189)
Q Consensus 700 ~lr~~v~~~I~~L~~aGIkv~mlTGD 725 (1189)
++-||+.++++.|+++|+++.++|..
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 45799999999999999999999975
|