Citrus Sinensis ID: 001071

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160-----
MVRSASSPSSSPVTITVSSGGKGGGSRSMGLTSPVPRASFSNNPNSPLSGRAHRARSSSGGRYVSMSKDDATEEISSEFVTYTVHIPPTPDHQPMSASQTSLNEDTKSEVKPERSFISDTIFTGGFNSVTRGHVIDCSFEQTEPVKSGLICGMKGCDEKVMQNKCDCGFKICRECYLECAGNGGGRCPGCKEPYKDASDGEIEDEVISEEGDQALPLPSMADFKLDKRLSLVKSFKAQNHPPDFDHTRWLFETKGTYGYGNALWPKDGYGAESGSNGFEHPSDFGDRCRRPLARKIGVSTAIISPYRLIIVTRLAALALFLAWRIRHPNREAMWLWGMSITCEFWFAFSWVFDQLPKLCPVNRVTDLTVLKDRFESPNLCNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAETASFARIWVPFCRKHNIEPRNPEAYFEQKRNFLKNKIRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQMEMGGSTAEPVKVPKATWMSDGSHWPGTWTSGEPDHSRGDHAGIIQAMLAPPNAEPVFGVEADGENLIDSTEVDVRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPNDRYANHNTVFFDVAMRALDGLQGPMYVGTGCIFRRTALYGFSPPRATEHHGWFGSRKIKLCLRKPKVAKKVDDEIALPINGDHNDDDADIESLLLPKRFGNSTSLAASIPVAEYQGRLLQDLQGKGNQGRPPGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRRMKFLQRVAYFNVGMYPFTSMFLLVYCILPAVSLFSGQFIVQSLSISFLIYLLAITVTLCMLALLEIKWSGITLHDWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDQFAELYEVKWSFLMVPPITIMMVNVIAIAVGVARTMYSPFPQWSRLIGGVFFSLWVLSHLYPFAKGLMGRRGKVSTIVFLWSGLISLIISLLWVYISPPSGRQDYMKFQFP
ccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCEEEccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccCECcccccHHHccccccccccccccccccccccEEEEEcccccccccHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccEEEEEcccccccccccHcccHHHHHHHccccccccEEEECcccccccHHHHHHHHHHccccccccCEEEEEcccccccccccccccccccccEEEEEcccccccccEEEccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccHHHHHHHHHHHHcccHHHcccccccccccccccccccccccHHHHHHHHHHcccEEECcccccccccEEEEcccccHHHHHHHcccccEEEEEccccccccccccccHHHHHHHHHcccHHHHHHHHHccccHHHcccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccccccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEHHHHHHHHHHHHHHHEEECccccccccccccccc
****************************************************************************SEFVTYTVHIPPTPDH***********************FISDTIFTGGFNSVTRGHVIDCSFEQTEPVKSGLICGMKGCDEKVMQNKCDCGFKICRECYLECAGNGGGRCPGCKEPYKD************************************************DHTRWLFETKGTYGYGNALWPKDGYG*************FGDRCRRPLARKIGVSTAIISPYRLIIVTRLAALALFLAWRIRHPNREAMWLWGMSITCEFWFAFSWVFDQLPKLCPVNRVTDLTVLKDRFESPNLCN*****DLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAETASFARIWVPFCRKHNIEPRNPEAYFEQKRNFLKNKIRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELR***K*********EPVKVPKATWMSDGSHWPGTWTSGEPDHSRGDHAGIIQAMLAPPNAEPVFGVEADGENLIDSTEVDVRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPNDRYANHNTVFFDVAMRALDGLQGPMYVGTGCIFRRTALYGFSPPRATEHHGWFGSRKIKLCLRK****************GDHNDDDADIESLLLPKRFGNSTSLAASIPVAEYQGRLLQDLQGKGNQGRPPGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRRMKFLQRVAYFNVGMYPFTSMFLLVYCILPAVSLFSGQFIVQSLSISFLIYLLAITVTLCMLALLEIKWSGITLHDWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSAT****DDQFAELYEVKWSFLMVPPITIMMVNVIAIAVGVARTMYSPFPQWSRLIGGVFFSLWVLSHLYPFAKGLMGRRGKVSTIVFLWSGLISLIISLLWVYISPPSGRQD*M*FQFP
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MVRSASSPSSSPVTITVSSGGKGGGSRSMGLTSPVPRASFSNNPNSPLSGRAHRARSSSGGRYVSMSKDDATEEISSEFVTYTVHIPPTPDHQPMSASQTSLNEDTKSEVKPERSFISDTIFTGGFNSVTRGHVIDCSFEQTEPVKSGLICGMKGCDEKVMQNKCDCGFKICRECYLECAGNGGGRCPGCKEPYKDASDGEIEDEVISEEGDQALPLPSMADFKLDKRLSLVKSFKAQNHPPDFDHTRWLFETKGTYGYGNALWPKDGYGAESGSNGFEHPSDFGDRCRRPLARKIGVSTAIISPYRLIIVTRLAALALFLAWRIRHPNREAMWLWGMSITCEFWFAFSWVFDQLPKLCPVNRVTDLTVLKDRFESPNLCNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAETASFARIWVPFCRKHNIEPRNPEAYFEQKRNFLKNKIRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQMEMGGSTAEPVKVPKATWMSDGSHWPGTWTSGEPDHSRGDHAGIIQAMLAPPNAEPVFGVEADGENLIDSTEVDVRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPNDRYANHNTVFFDVAMRALDGLQGPMYVGTGCIFRRTALYGFSPPRATEHHGWFGSRKIKLCLRKPKVAKKVDDEIALPINGDHNDDDADIESLLLPKRFGNSTSLAASIPVAEYQGRLLQDLQGKGNQGRPPGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRRMKFLQRVAYFNVGMYPFTSMFLLVYCILPAVSLFSGQFIVQSLSISFLIYLLAITVTLCMLALLEIKWSGITLHDWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDQFAELYEVKWSFLMVPPITIMMVNVIAIAVGVARTMYSPFPQWSRLIGGVFFSLWVLSHLYPFAKGLMGRRGKVSTIVFLWSGLISLIISLLWVYISPPSGRQDYMKFQFP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cellulose synthase-like protein D5 Involved in stem and root growth. Possesses xylan and homogalacturonan synthase activity.confidentQ9SRW9
Cellulose synthase-like protein D2 Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.probableQ9LHZ7
Cellulose synthase-like protein D4 Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.probableQ2QNS6

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.4.-.-Glycosyltransferases.probable
2.4.1.-Hexosyltransferases.probable
2.4.1.12Cellulose synthase (UDP-forming).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4HG6, chain A
Confidence level:very confident
Coverage over the Query: 307-368,383-441,481-507,521-522,607-730,804-805,859-1123
View the alignment between query and template
View the model in PyMOL
Template: 1WEO, chain A
Confidence level:confident
Coverage over the Query: 145-207
View the alignment between query and template
View the model in PyMOL