Citrus Sinensis ID: 001087
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1159 | 2.2.26 [Sep-21-2011] | |||||||
| Q9XIE6 | 1213 | Phospholipid-transporting | yes | no | 0.988 | 0.944 | 0.791 | 0.0 | |
| Q9LI83 | 1202 | Phospholipid-transporting | no | no | 0.916 | 0.883 | 0.473 | 0.0 | |
| Q9SAF5 | 1203 | Putative phospholipid-tra | no | no | 0.914 | 0.881 | 0.471 | 0.0 | |
| Q9SX33 | 1200 | Putative phospholipid-tra | no | no | 0.912 | 0.881 | 0.467 | 0.0 | |
| Q9LNQ4 | 1216 | Putative phospholipid-tra | no | no | 0.909 | 0.866 | 0.462 | 0.0 | |
| P57792 | 1184 | Putative phospholipid-tra | no | no | 0.912 | 0.893 | 0.460 | 0.0 | |
| Q9SGG3 | 1228 | Putative phospholipid-tra | no | no | 0.906 | 0.855 | 0.452 | 0.0 | |
| Q9LVK9 | 1243 | Putative phospholipid-tra | no | no | 0.899 | 0.839 | 0.452 | 0.0 | |
| Q9SLK6 | 1240 | Phospholipid-transporting | no | no | 0.903 | 0.844 | 0.449 | 0.0 | |
| Q9LK90 | 1189 | Putative phospholipid-tra | no | no | 0.908 | 0.885 | 0.452 | 0.0 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1962 bits (5082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 917/1159 (79%), Positives = 1047/1159 (90%), Gaps = 13/1159 (1%)
Query: 2 FLPFYQKGCLN--RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDW 59
FLP KG RR+AN YFL IS LS TP+SPV+P+TNV PLS+VLLVSLIKEA+EDW
Sbjct: 66 FLP---KGLFEQFRRIANIYFLGISCLSMTPISPVSPITNVAPLSMVLLVSLIKEAFEDW 122
Query: 60 KRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVC 119
KRFQNDM+IN++ VE+LQ Q+WVSIPWRKLQVGDIV +K+DGFFPAD+LF++STN+DG+C
Sbjct: 123 KRFQNDMSINNSTVEILQDQQWVSIPWRKLQVGDIVKIKKDGFFPADILFMSSTNSDGIC 182
Query: 120 YIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQT 179
Y+ETANLDGETNLKIRKALERTWDYL PEKA EFKGE+QCEQPNNSLYTFTGNL++QKQT
Sbjct: 183 YVETANLDGETNLKIRKALERTWDYLVPEKAYEFKGEIQCEQPNNSLYTFTGNLVVQKQT 242
Query: 180 LPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALF 239
LPL+P+Q+LLRGCSLRNTEYI+GAV+F GHETKVMMN+MN PSKRSTLE+KLDKLI+ +F
Sbjct: 243 LPLSPDQLLLRGCSLRNTEYIVGAVVFTGHETKVMMNAMNAPSKRSTLEKKLDKLIITIF 302
Query: 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYS 299
L MCLI AIG +I D++ YLGLHN + ++ FTL+TL+S
Sbjct: 303 CVLVTMCLIGAIGCSIVTDREDKYLGLHN-------SDWEYRNGLMIGFFTFFTLVTLFS 355
Query: 300 PIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKT 359
IIPISLYVSIE IKF QSTQ+IN+DL+MYHAE+NTPASARTSNLNEELGQVEYIFSDKT
Sbjct: 356 SIIPISLYVSIEMIKFIQSTQFINRDLNMYHAETNTPASARTSNLNEELGQVEYIFSDKT 415
Query: 360 GTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPR 419
GTLTRNLMEFFKCSIGG YG G+TEIE+G+AQ+ G+K+ E +RS A+ EKGFNFDDPR
Sbjct: 416 GTLTRNLMEFFKCSIGGVSYGCGVTEIEKGIAQRHGLKVQEEQRSTGAIREKGFNFDDPR 475
Query: 420 LLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGF 479
L+RGAWRNE NPD CKE FRCLAICHTVLPEGDESPE+I YQAASPDEAALVTAAKNFGF
Sbjct: 476 LMRGAWRNEPNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGF 535
Query: 480 FFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKG 539
FFYRRTPTM+YVRESHVEKMGK+QDV YEILNVLEFNSTRKRQSVVCR+ DGRLVLYCKG
Sbjct: 536 FFYRRTPTMVYVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKG 595
Query: 540 ADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSS 599
AD+VI+ERLANG +D++KVTREHLE FGSSGLRTLCLAY+DL+P+ Y+ WNEKFIQAKS+
Sbjct: 596 ADNVIFERLANGMDDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSA 655
Query: 600 LRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETA 659
LRDRE+KLDEVAELIEKDL LIG TAIEDKLQEGVP CIETL+RAGIKIWVLTGDKMETA
Sbjct: 656 LRDREKKLDEVAELIEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETA 715
Query: 660 INIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQY 719
INIAYACNLINNEMKQF+I+SET+AIR+ EERGD VEIAR ++EEVKREL K ++EAQ
Sbjct: 716 INIAYACNLINNEMKQFVISSETDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHS 775
Query: 720 IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG 779
+H+++G KL+L+IDGKCLMYALDPSLRV+LL+LSLNC+SVVCCRVSPLQKAQVTSLV+KG
Sbjct: 776 LHTVAGPKLSLVIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKG 835
Query: 780 ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWS 839
A+KITLSIGDGANDVSMIQAAH+G+GISG EGMQAVMASDFAIAQFRFLTDLLLVHGRWS
Sbjct: 836 AQKITLSIGDGANDVSMIQAAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWS 895
Query: 840 YLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLF 899
YLRICKVV+YFFYKNLTFTLTQFWFTF+TGFSGQRFYDDWFQSL+NV+FT++PVI+LGLF
Sbjct: 896 YLRICKVVMYFFYKNLTFTLTQFWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLF 955
Query: 900 EKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSG 959
EKDVSASLSK+YP+LY+EGI+N FF WRVVA+WA +VYQSLV Y VTTSS NSSG
Sbjct: 956 EKDVSASLSKRYPELYREGIRNSFFKWRVVAVWATSAVYQSLVCYLFVTTSSFGAVNSSG 1015
Query: 960 KIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1019
K+FG+WDVSTM FTC+V+ VN+R+L+M N+ITR+HYITVGGSILAW +F F+Y GIMTP+
Sbjct: 1016 KVFGLWDVSTMVFTCLVIAVNVRILLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPH 1075
Query: 1020 DRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHRHDP 1079
DR ENV+FVI+VLMSTFYFYFTL+LVP+++LLGDFIFQGV+RWF PYDYQIVQE+HRH+
Sbjct: 1076 DRNENVYFVIYVLMSTFYFYFTLLLVPIVSLLGDFIFQGVERWFFPYDYQIVQEIHRHE- 1134
Query: 1080 EDRRMADLVEIGNQLTPEEARSYAIAQLPRELSKHTGFAFDSPGYESFFASQLGIYAPQK 1139
D AD +E+ N+LTP+EARSYAI+QLPRELSKHTGFAFDSPGYESFFASQLGIYAPQK
Sbjct: 1135 SDASKADQLEVENELTPQEARSYAISQLPRELSKHTGFAFDSPGYESFFASQLGIYAPQK 1194
Query: 1140 PWDVARRASMRSRPRIPKK 1158
WDVARRASMRSRP++PKK
Sbjct: 1195 AWDVARRASMRSRPKVPKK 1213
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|Q9LI83|ALA10_ARATH Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/1085 (47%), Positives = 703/1085 (64%), Gaps = 23/1085 (2%)
Query: 13 RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTP 72
RRVAN YFL+ ILS T +SP V+ ++PL+LV+ +++KE EDW+R Q D+ +N+
Sbjct: 82 RRVANFYFLVTGILSLTDLSPYGAVSALLPLALVISATMVKEGIEDWRRKQQDIEVNNRK 141
Query: 73 VEVLQGQR-WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETN 131
V+V G + WR L+VGDIV V++D FFPADLL L+S+ D VCY+ET NLDGETN
Sbjct: 142 VKVHDGNGIFRQEEWRNLRVGDIVRVEKDEFFPADLLLLSSSYEDSVCYVETMNLDGETN 201
Query: 132 LKIRKALERTWDYLTPEKA-SEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLR 190
LK+++ LE T L + +F+G V+CE PN +LY F G L ++++ PL+ QILLR
Sbjct: 202 LKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEERFPLSIQQILLR 261
Query: 191 GCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICA 250
LRNTEY+ GAV+F GH+TKV+ NS + PSKRS +ER +DK+I +F + +M + +
Sbjct: 262 DSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMFGLVFLMSFVGS 321
Query: 251 IGSAIFIDKKHYYLGLHNMGNSVEDDQ---FNPDKRFLVFVLNMFTLITLYSPIIPISLY 307
I + + G DD F+P++ + + + FT LYS IPISLY
Sbjct: 322 IIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIYHFFTATMLYSYFIPISLY 381
Query: 308 VSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLM 367
VSIE +K QS +IN+D+HMY+ E++ PA ARTSNLNEELG V+ I SDKTGTLT N M
Sbjct: 382 VSIEIVKVLQSI-FINRDIHMYYEETDKPAQARTSNLNEELGMVDTILSDKTGTLTCNSM 440
Query: 368 EFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHE------KGFNFDDPRLL 421
EF KCSI G+ YG GITE+ER +A ++G P V + V + KGFNF+D R++
Sbjct: 441 EFIKCSIAGKAYGRGITEVERAMAVRSGGS-PLVNEDLDVVVDQSGPKVKGFNFEDERVM 499
Query: 422 RGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFF 481
G W + ++FFR LA+CHT +PE DE ++Y+A SPDEAA V AA+ FGF F
Sbjct: 500 NGNWVRQPEAAVLQKFFRLLAVCHTAIPETDEESGNVSYEAESPDEAAFVVAAREFGFEF 559
Query: 482 YRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGAD 541
+ RT I RE + K++ V Y +LNVLEFNSTRKR SV+ R DG+L+L KGAD
Sbjct: 560 FNRTQNGISFRELDLVSGEKVERV-YRLLNVLEFNSTRKRMSVIVRDDDGKLLLLSKGAD 618
Query: 542 SVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSL- 600
+V++ERLA + T+EH+ Q+ +GLRTL LAYR++ + Y +N+ F +AK+S+
Sbjct: 619 NVMFERLAKNGRQFEAKTQEHVNQYADAGLRTLVLAYREVDENEYIEFNKSFNEAKASVS 678
Query: 601 RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAI 660
DRE +DE+ + +E+DL L+G TA+EDKLQ GVP CI+ LA+AGIKIWVLTGDKMETAI
Sbjct: 679 EDREALIDEITDKMERDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAI 738
Query: 661 NIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYI 720
NI +A +L+ EMKQ II ET I+ +E+ G EI RE V +L + +A
Sbjct: 739 NIGFASSLLRQEMKQIIINLETPQIKSLEKSGGKDEIELASRESVVMQLQE--GKALLAA 796
Query: 721 HSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA 780
S E ALIIDGK L YAL+ ++ + L+L+ +C+SV+CCR SP QKA VT LVK G
Sbjct: 797 SGASSEAFALIIDGKSLTYALEDEIKKMFLDLATSCASVICCRSSPKQKALVTRLVKSGT 856
Query: 781 RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSY 840
K TL+IGDGANDV M+Q A IGVGISG EGMQAVM+SD AIAQFR+L LLLVHG W Y
Sbjct: 857 GKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCY 916
Query: 841 LRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFE 900
RI ++ YFFYKN+TF +T F + T FSGQ Y+DWF SL+NV F+S+PVI LG+F+
Sbjct: 917 SRIASMICYFFYKNITFGVTVFLYEAYTSFSGQPAYNDWFLSLFNVFFSSLPVIALGVFD 976
Query: 901 KDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSL-VLYNCVTTSSATGQNSSG 959
+DVSA K+P LYQEG++N+ F+W+ + W F +L + + C + + G
Sbjct: 977 QDVSARFCYKFPLLYQEGVQNILFSWKRIIGWMFNGFISALAIFFLCKESLKHQLFDPDG 1036
Query: 960 KIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1019
K G + +TCVV VNL++ + + T +I + GSI W++F+ +Y G MTP+
Sbjct: 1037 KTAGREILGGTMYTCVVWVVNLQMALSISYFTWVQHIVIWGSIAFWYIFLMIY-GAMTPS 1095
Query: 1020 DRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQ----EMH 1075
+ + L ++ T + V + AL+ F+++ VQ F P +Q++Q E H
Sbjct: 1096 FSTDAYMVFLEALAPAPSYWLTTLFVMIFALIPYFVYKSVQMRFFPKYHQMIQWIRYEGH 1155
Query: 1076 RHDPE 1080
+DPE
Sbjct: 1156 SNDPE 1160
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SAF5|ALA11_ARATH Putative phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/1090 (47%), Positives = 699/1090 (64%), Gaps = 30/1090 (2%)
Query: 13 RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTP 72
RRVAN YFL+ +LS T +SP +P++ ++PL+ V+ S++KEA EDW R + D+ +N+
Sbjct: 80 RRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMVKEAIEDWGRKKQDIEMNNRK 139
Query: 73 VEVLQGQR-WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETN 131
V+V G + WR L+VG+IV V++D FFPADLL L+S+ D +CY+ET NLDGETN
Sbjct: 140 VKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLSSSYEDSICYVETMNLDGETN 199
Query: 132 LKIRKALERTWDYLTPEKA-SEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLR 190
LK+++ LE T L + E K V+CE PN LYTF G L ++Q LPL+ Q+LLR
Sbjct: 200 LKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVGTLHFEEQRLPLSITQLLLR 259
Query: 191 GCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICA 250
LRNTEYI G V+F GH+TKV+ NS + PSKRS +ERK+DK+I +F + +M I +
Sbjct: 260 DSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKMDKIIYLMFGVVFLMSFIGS 319
Query: 251 IGSAIFIDK---------KHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPI 301
I I + + +YL N D F+PD+ + V + FT + LYS
Sbjct: 320 IVFGIETREDRVRNGGRTERWYLRPDNA-----DIFFDPDRAPMAAVYHFFTAVMLYSYF 374
Query: 302 IPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGT 361
IPISLYVSIE +K QS +IN D+ MY+ E++ PA ARTSNLNEELG V+ I SDKTGT
Sbjct: 375 IPISLYVSIEIVKVLQSL-FINNDILMYYEENDKPAHARTSNLNEELGMVDTILSDKTGT 433
Query: 362 LTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHE-----KGFNFD 416
LT N MEF KCSI G YG GITE+ER +A ++ + V + KGFNF
Sbjct: 434 LTCNSMEFIKCSIAGTAYGRGITEVERSMAMRSNGSSLVGDDLDVVVDQSGPKIKGFNFL 493
Query: 417 DPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKN 476
D R+++G W + + ++FFR LA+CHT +PE DE+ ++Y+A SPDEAA V AA+
Sbjct: 494 DERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSYEAESPDEAAFVVAARE 553
Query: 477 FGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLY 536
FGF F+ RT I RE + GK + Y +LNVLEFNS RKR SV+ R DGRL+L
Sbjct: 554 FGFEFFSRTQNGISFRELDLAS-GKTVERVYRLLNVLEFNSARKRMSVIVRDEDGRLLLL 612
Query: 537 CKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQA 596
KGAD+V++ERLA ++ TREH+ ++ +GLRTL LAYR++ + Y +++ F +A
Sbjct: 613 SKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREVDENEYIEFSKNFNEA 672
Query: 597 KSSLR-DREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDK 655
K+S+ DRE +DE+ E +E+DL L+G TA+EDKLQ GVP CI+ LA+AGIKIWVLTGDK
Sbjct: 673 KNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDK 732
Query: 656 METAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDE 715
METAINI +AC+L+ EMKQ II ET I+ +E+ G+ I RE V ++ +
Sbjct: 733 METAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHASRESVVNQMEEGKAL 792
Query: 716 AQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSL 775
+ S E ALIIDGK L YAL+ + L+L+ C+SV+CCR SP QKA VT L
Sbjct: 793 LTASSSASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVICCRSSPKQKALVTRL 852
Query: 776 VKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVH 835
VK G K TL+IGDGANDV M+Q A IGVGISG EGMQAVM+SD AIAQFR+L LLLVH
Sbjct: 853 VKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVH 912
Query: 836 GRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIM 895
G W Y RI ++ YFFYKN+TF +T F + T FS Q Y+DWF SL+NV F+S+PVI
Sbjct: 913 GHWCYSRISSMICYFFYKNITFGVTVFLYEAYTSFSAQPAYNDWFLSLFNVFFSSLPVIA 972
Query: 896 LGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSL-VLYNCVTTSSATG 954
LG+F++DVSA K+P LYQEG++N+ F+W+ + W F V+ +L + + C +
Sbjct: 973 LGVFDQDVSARYCYKFPLLYQEGVQNLLFSWKRIIGWMFNGVFTALAIFFLCKESLKHQL 1032
Query: 955 QNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTG 1014
N +GK G + +TCVV VNL++ + + T +I + GS+ W++F+ +Y G
Sbjct: 1033 YNPNGKTAGREILGGTMYTCVVWVVNLQMALAISYFTWLQHIVIWGSVAFWYIFLMIY-G 1091
Query: 1015 IMTPNDRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQ-- 1072
+TP+ + I L ++ T + V AL+ F+F+ VQ F P +Q++Q
Sbjct: 1092 AITPSFSTDAYKVFIEALAPAPSYWLTTLFVMFFALIPFFVFKSVQMRFFPGYHQMIQWI 1151
Query: 1073 --EMHRHDPE 1080
E H +DPE
Sbjct: 1152 RYEGHSNDPE 1161
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SX33|ALA9_ARATH Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/1092 (46%), Positives = 707/1092 (64%), Gaps = 34/1092 (3%)
Query: 13 RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTP 72
RRVAN YFL+ +L+ TP++P + +VPL V+ +++KE EDW+R + D +N+
Sbjct: 84 RRVANFYFLVTGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGVEDWRRQKQDNEVNNRK 143
Query: 73 VEVLQGQ-RWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETN 131
V+V +G + + W+ L +GDIV V+++ FFPADL+ L+S+ D +CY+ET NLDGETN
Sbjct: 144 VKVHRGDGSFDAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYEDAICYVETMNLDGETN 203
Query: 132 LKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRG 191
LK+++ LE T F+ V+CE PN +LY+F G + ++ PL+P Q+LLR
Sbjct: 204 LKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYPLSPQQLLLRD 263
Query: 192 CSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAI 251
LRNT++I GAVIF GH+TKV+ NS + PSKRS +E+K+DK+I +F + M I
Sbjct: 264 SKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFMVITMAFI--- 320
Query: 252 GSAIF-----IDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISL 306
GS IF D K + + F+P + + + + T + LYS IPISL
Sbjct: 321 GSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYSYFIPISL 380
Query: 307 YVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNL 366
YVSIE +K QS +IN+D+HMY+ E++ PA ARTSNLNEELGQV+ I SDKTGTLT N
Sbjct: 381 YVSIEIVKVLQSI-FINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNS 439
Query: 367 MEFFKCSIGGEIYGTGITEIERGVAQQTGMKIP--------EVERSVKAVHE----KGFN 414
MEF KCS+ G YG G+TE+E + ++ G + ++E S +A+ E KGFN
Sbjct: 440 MEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITEESTVKGFN 499
Query: 415 FDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAA 474
F D R++ G W E + D ++FFR LA+CHTV+PE DE E+I+Y+A SPDEAA V AA
Sbjct: 500 FRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEAAFVIAA 559
Query: 475 KNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLV 534
+ GF F+ RT T I VRE + GK + Y++LNVLEFNSTRKR SV+ + DG+L+
Sbjct: 560 RELGFEFFNRTQTTISVRELDLVS-GKRVERLYKVLNVLEFNSTRKRMSVIVQEEDGKLL 618
Query: 535 LYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFI 594
L CKGAD+V++ERL+ + ++ TR+H+ ++ +GLRTL LAYR+L Y+ +NE+
Sbjct: 619 LLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEKEYKVFNERIS 678
Query: 595 QAKSSLR-DREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTG 653
+AKSS+ DRE ++EV E IEKDL L+G TA+EDKLQ GVP CI+ LA+AGIKIWVLTG
Sbjct: 679 EAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTG 738
Query: 654 DKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCI 713
DKMETAINI +AC+L+ +MKQ II ET I+ +E+ G+ IA+ +E V L++ I
Sbjct: 739 DKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKENV---LSQII 795
Query: 714 DEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVT 773
+ Q +S G ALIIDGK L YALD ++ I L L+++C+SV+CCR SP QKA VT
Sbjct: 796 NGKTQLKYS-GGNAFALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSSPKQKALVT 854
Query: 774 SLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLL 833
LVK G K TL+IGDGANDV M+Q A IGVGISG EGMQAVM+SD AIAQFR+L LLL
Sbjct: 855 RLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLL 914
Query: 834 VHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPV 893
VHG W Y RI ++ YFFYKN+TF T F + T FS Y+DWF SLYNV F+S+PV
Sbjct: 915 VHGHWCYRRISTMICYFFYKNITFGFTLFLYETYTTFSSTPAYNDWFLSLYNVFFSSLPV 974
Query: 894 IMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYN-CVTTSSA 952
I LG+F++DVSA K+P LYQEG++NV F+WR + W F Y +++++ C ++ +
Sbjct: 975 IALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILGWMFNGFYSAVIIFFLCKSSLQS 1034
Query: 953 TGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLY 1012
N GK G + +TC+V VNL++ + + T +I + SI+ W+ F+ +Y
Sbjct: 1035 QAFNHDGKTPGREILGGTMYTCIVWVVNLQMALAISYFTLIQHIVIWSSIVVWYFFITVY 1094
Query: 1013 TGIMTPNDRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQ 1072
+ + FV + S Y+ TL +V V L+ FI+ +Q F P + ++Q
Sbjct: 1095 GELPSRISTGAYKVFVEALAPSLSYWLITLFVV-VATLMPYFIYSALQMSFFPMYHGMIQ 1153
Query: 1073 ----EMHRHDPE 1080
E +DPE
Sbjct: 1154 WLRYEGQCNDPE 1165
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/1100 (46%), Positives = 699/1100 (63%), Gaps = 46/1100 (4%)
Query: 13 RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTP 72
R AN YFL+ +ILS P+SP N + + PL V+ +S++KEA EDW RF D+ IN++
Sbjct: 83 HRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLKEALEDWSRFMQDVKINASK 142
Query: 73 VEVLQGQ-RWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETN 131
V V + + W+K+ VGDIV V++DGFFPADLL L+S+ DG+CY+ET NLDGETN
Sbjct: 143 VYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLLLSSSYEDGICYVETMNLDGETN 202
Query: 132 LKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRG 191
LK++++LE T + +F G ++CE PN SLYTF GNL ++Q PL+P+QILLR
Sbjct: 203 LKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTFVGNLEYERQIFPLDPSQILLRD 262
Query: 192 CSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAI 251
LRNT Y+ G V+F GH+TKVM NS PSKRS +E+ +D +I L L ++ I +
Sbjct: 263 SKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKTMDYIIYTLLVLLILISCISSS 322
Query: 252 GSA---IFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYV 308
G A F K +YL N NP +++ T + LY +IPISLYV
Sbjct: 323 GFAWETKFHMPKWWYLRPEEPENLT-----NPSNPVYAGFVHLITALLLYGYLIPISLYV 377
Query: 309 SIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 368
SIE +K Q++ +INKDLHMY +ES PA ARTSNLNEELGQV+ I SDKTGTLT N M+
Sbjct: 378 SIEVVKVLQAS-FINKDLHMYDSESGVPAHARTSNLNEELGQVDTILSDKTGTLTCNQMD 436
Query: 369 FFKCSIGGEIYGTGITEIERGVAQQTGMKIPE-------------------VERSVKA-V 408
F KCSI G YG +E+E AQQ + + E VE S+ +
Sbjct: 437 FLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTPRAQARDIEVESSITPRI 496
Query: 409 HEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEA 468
KGF F+D RL+ G W E + D FFR LAICHT +PE +E + TY+A SPDEA
Sbjct: 497 PIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIPELNEETGKYTYEAESPDEA 556
Query: 469 ALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRY 528
+ +TAA FGF F++RT + +YV E + G+ + Y++LN+L+F S RKR SVV R
Sbjct: 557 SFLTAASEFGFVFFKRTQSSVYVHE-RLSHSGQTIEREYKVLNLLDFTSKRKRMSVVVRD 615
Query: 529 ADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYER 588
+G+++L CKGADS+I+ERLA + T +HL ++G +GLRTL L+YR L + Y
Sbjct: 616 EEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYGEAGLRTLALSYRKLDEEEYSA 675
Query: 589 WNEKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIK 647
WN +F +AK+S+ DR++ L+ ++++IEKDL L+G TA+EDKLQ+GVP CI+ LA+AG+K
Sbjct: 676 WNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLK 735
Query: 648 IWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707
+WVLTGDKMETAINI Y+C+L+ MKQ IT V G + A+ +++ +
Sbjct: 736 LWVLTGDKMETAINIGYSCSLLRQGMKQICITV-------VNSEGASQD-AKAVKDNILN 787
Query: 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPL 767
++ K + + + ALIIDGK L YAL+ ++ L L+++C+SV+CCRVSP
Sbjct: 788 QITKAVQMVK--LEKDPHAAFALIIDGKTLTYALEDEMKYQFLALAVDCASVICCRVSPK 845
Query: 768 QKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 827
QKA VT LVK+G KITL+IGDGANDV MIQ A IGVGISG EGMQAVMASDF+IAQFRF
Sbjct: 846 QKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRF 905
Query: 828 LTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVI 887
L LL+VHG W Y RI +++ YFFYKN+ F LT F+F TGFSGQ Y+D++ L+NV+
Sbjct: 906 LERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLFNVV 965
Query: 888 FTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNC- 946
TS+PVI LG+FE+DVS+ + ++P LYQ+G KN+FF W + W VY SLV++
Sbjct: 966 LTSLPVIALGVFEQDVSSEICLQFPALYQQGKKNLFFDWYRILGWMGNGVYSSLVIFFLN 1025
Query: 947 VTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWF 1006
+ SG+ + V T FTC++ VN+++ + + T ++ + GSI W+
Sbjct: 1026 IGIIYEQAFRVSGQTADMDAVGTTMFTCIIWAVNVQIALTVSHFTWIQHVLIWGSIGLWY 1085
Query: 1007 LFVFLYTGIMTPNDRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPY 1066
LFV LY G+M P+ ++ +L ++ LV V +L F QR+ P
Sbjct: 1086 LFVALY-GMMPPSLSGNIYRILVEILAPAPIYWIATFLVTVTTVLPYFAHISFQRFLHPL 1144
Query: 1067 DYQIVQEM--HRHDPEDRRM 1084
D+ I+QE+ ++ D EDRRM
Sbjct: 1145 DHHIIQEIKYYKRDVEDRRM 1164
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P57792|ALA12_ARATH Putative phospholipid-transporting ATPase 12 OS=Arabidopsis thaliana GN=ALA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/1080 (46%), Positives = 698/1080 (64%), Gaps = 22/1080 (2%)
Query: 13 RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTP 72
RRVAN YFL++ ILS TP++P V+ +VPL+ V+L ++ KE EDW+R Q D+ +N+
Sbjct: 84 RRVANFYFLVVGILSFTPLAPYTAVSAIVPLTFVILATMFKEGVEDWRRKQQDIEVNNRK 143
Query: 73 VEVLQGQRWVSI-PWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETN 131
V V +G + W+ L+VGDI+ V+++ FFPADL+ L+S+ D VCY+ET NLDGETN
Sbjct: 144 VRVHRGNGNFDLREWKTLRVGDILKVEKNEFFPADLVLLSSSYEDAVCYVETMNLDGETN 203
Query: 132 LKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRG 191
LK+++ LE T +F+ ++CE PN +LY+F G + ++ + PL+P Q+LLRG
Sbjct: 204 LKLKQGLEVTLSLREELNFRDFEAFIKCEDPNANLYSFVGTMDLKGEKYPLSPQQLLLRG 263
Query: 192 CSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAI 251
LRNT+YI G VIF G +TKV+ NS + PSKRS +ERK+DK+I +F + + ++
Sbjct: 264 SKLRNTDYIYGVVIFTGPDTKVVQNSTDPPSKRSMIERKMDKIIYLMFLMVFSLAFFGSV 323
Query: 252 GSAIFIDKKHYYLGLHNMGNSVEDDQ---FNPDKRFLVFVLNMFTLITLYSPIIPISLYV 308
I+ + + G+ DD F+P + + + + T + L S IPISLYV
Sbjct: 324 LFGIWT-RDDFQNGVMERWYLKPDDSSIFFDPKRAPMAAIYHFLTALMLNSYFIPISLYV 382
Query: 309 SIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 368
SIE +K QS +IN+D+HMY+ E++ PA ARTSNLNEELGQV I SDKTGTLT N ME
Sbjct: 383 SIEIVKVLQSI-FINQDIHMYYEEADKPAHARTSNLNEELGQVGTILSDKTGTLTCNSME 441
Query: 369 FFKCSIGGEIYGTGITEIERGVAQQTGMKI------PEVERSVKAVHE-KGFNFDDPRLL 421
F KCSI G YG G+TE+E + ++ G + E +V A KGFNF D R++
Sbjct: 442 FIKCSIAGTAYGRGVTEVEMAMDKRKGSALVNQSNGNSTEDAVAAEPAVKGFNFRDERIM 501
Query: 422 RGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFF 481
G W E + D ++FF+ LA+CHTV+PE DE +I+Y+A SPDEAA V AA+ GF F
Sbjct: 502 DGNWVTETHADVIQKFFQLLAVCHTVIPEVDEDTGKISYEAESPDEAAFVIAARELGFEF 561
Query: 482 YRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGAD 541
+ RT T I VRE + G+ + Y +LNVLEF+S++KR SV+ + DG+L+L CKGAD
Sbjct: 562 FTRTQTTISVRELDL-VTGERVERLYSVLNVLEFSSSKKRMSVIVQDQDGKLLLLCKGAD 620
Query: 542 SVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLR 601
SV++ERL+ +K TR+H+ ++ +GLRTL LAYR+L + YE + E+ +AK+S+
Sbjct: 621 SVMFERLSESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVS 680
Query: 602 -DREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAI 660
DRE +DEV E IEK+L L+G TA+EDKLQ GVP CI LA+AGIKIWVLTGDKMETAI
Sbjct: 681 ADREALIDEVTEKIEKNLVLLGATAVEDKLQNGVPDCINKLAQAGIKIWVLTGDKMETAI 740
Query: 661 NIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYI 720
NI +AC+L+ +MKQ II ET I+ +E+ G+ IA ++E V ++ +AQ
Sbjct: 741 NIGFACSLLRRDMKQIIINLETPEIQQLEKSGEKDAIAA-LKENVLHQITS--GKAQLKA 797
Query: 721 HSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA 780
+ + ALIIDGK L YAL+ ++ I L L++ C+SV+CCR SP QKA VT LVK G+
Sbjct: 798 SGGNAKAFALIIDGKSLAYALEEDMKGIFLELAIGCASVICCRSSPKQKALVTRLVKTGS 857
Query: 781 RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSY 840
+ TL+IGDGANDV M+Q A IGVGISG EGMQAVM+SD AIAQFR+L LLLVHG W Y
Sbjct: 858 GQTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCY 917
Query: 841 LRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFE 900
RI K++ YFFYKN+TF T F + T FS Y+DW+ SLY+V FTS+PVI LG+F+
Sbjct: 918 RRISKMICYFFYKNITFGFTLFLYEAYTSFSATPAYNDWYLSLYSVFFTSLPVICLGIFD 977
Query: 901 KDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYN-CVTTSSATGQNSSG 959
+DVSA K+P LYQEG++N+ F+WR + W F +++++ C T+ + N G
Sbjct: 978 QDVSAPFCLKFPVLYQEGVQNLLFSWRRILSWMFHGFCSAIIIFFLCKTSLESQAFNHEG 1037
Query: 960 KIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1019
K G + +TCVV V+L++++ + T ++ V GS++ W+LF+ +Y + P
Sbjct: 1038 KTAGRDILGGTMYTCVVWVVSLQMVLTISYFTLIQHVVVWGSVVIWYLFLMVYGSL--PI 1095
Query: 1020 DRQENVFFVIF-VLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHRHD 1078
+ + V L ++ T + V + ++ FIF +Q F P + VQ + D
Sbjct: 1096 RMSTDAYMVFLEALAPAPSYWITTLFVVLSTMMPYFIFSAIQMRFFPMSHGTVQLLRYED 1155
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/1115 (45%), Positives = 701/1115 (62%), Gaps = 64/1115 (5%)
Query: 13 RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTP 72
R AN YFL+ +ILS P+SP N + + PL V+ +S++KEA EDW+RF D+ IN+
Sbjct: 83 HRAANLYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLKEALEDWRRFMQDVKINARK 142
Query: 73 VEVLQGQR-WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETN 131
V + + W+K+ VGDIV V++D FFPADLL L+S+ DG+CY+ET NLDGETN
Sbjct: 143 TCVHKSDGVFRQRKWKKVSVGDIVKVEKDEFFPADLLLLSSSYEDGICYVETMNLDGETN 202
Query: 132 LKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRG 191
LK++++LE + E F ++CE PN +LYTF GNL ++QT PL+P+QILLR
Sbjct: 203 LKVKRSLEVSLPLDDDESFKNFMATIRCEDPNPNLYTFVGNLEFERQTFPLDPSQILLRD 262
Query: 192 CSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAI 251
LRNT Y+ G V+F G +TKVM NS PSKRS +ER +D +I L L ++ I +
Sbjct: 263 SKLRNTTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIERTMDYIIYTLLVLLILISCISSS 322
Query: 252 GSAI---FIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYV 308
G A F K +YL G + D NP V+++ T + LY +IPISLYV
Sbjct: 323 GFAWETEFHMPKMWYL---RPGEPI--DFTNPINPIYAGVVHLITALLLYGYLIPISLYV 377
Query: 309 SIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 368
SIE +K +Q++ +IN+DLHMY ES PA+ARTSNLNEELGQV I SDKTGTLT N M+
Sbjct: 378 SIEVVKVWQAS-FINQDLHMYDDESGVPANARTSNLNEELGQVHTILSDKTGTLTCNQMD 436
Query: 369 FFKCSIGGEIYGTGITEIERGVAQQTGMKI---------PEVERSVKAVHE--------- 410
F KCSI G YG +E+E A+Q + + P+ + V +
Sbjct: 437 FLKCSIAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQTKVYGTWDSSRTQEIEV 496
Query: 411 -------------KGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPER 457
KGF F+D RL+ G W E P+ +FFR LAICHT +PE +E +
Sbjct: 497 EGDNNYNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRILAICHTAIPELNEETGK 556
Query: 458 ITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNS 517
TY+A SPDEA+ + AA+ FGF F++RT + +++RE G++ + Y++LN+LEF S
Sbjct: 557 YTYEAESPDEASFLAAAREFGFEFFKRTQSSVFIRE-RFSGSGQIIEREYKVLNLLEFTS 615
Query: 518 TRKRQSVVCRYADGRLVLYCKGADSVIYERLA-NGNEDLKKVTREHLEQFGSSGLRTLCL 576
RKR +V+ R +G+++L CKGADS+I+ERLA NG L TR HL ++G +GLRTL L
Sbjct: 616 KRKRMTVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPTTR-HLTEYGEAGLRTLAL 674
Query: 577 AYRDLSPDMYERWNEKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVP 635
AYR L D Y WN +F++AK+S+ DR++ L+ A++IEK+L LIG TA+EDKLQ+GVP
Sbjct: 675 AYRKLDEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKELILIGATAVEDKLQKGVP 734
Query: 636 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPV 695
CI+ LA+AG+K+WVLTGDKMETAINI +AC+L+ M+Q ITS + G
Sbjct: 735 QCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICITS-------MNSEGGSQ 787
Query: 696 EIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLN 755
+ R ++E + +L K + + + ALIIDGK L YAL+ ++ L L+++
Sbjct: 788 DSKRVVKENILNQLTKAVQMVK--LEKDPHAAFALIIDGKTLTYALEDDMKYQFLALAVD 845
Query: 756 CSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAV 815
C+SV+CCRVSP QKA V LVK+G K TL+IGDGANDV MIQ A IGVGISG EGMQAV
Sbjct: 846 CASVICCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAV 905
Query: 816 MASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRF 875
MASDF+IAQFRFL LL+VHG W Y RI +++ YFFYKN+ F LT F+F TGFSGQ
Sbjct: 906 MASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSV 965
Query: 876 YDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFF 935
Y+D++ L+NV+ TS+PVI LG+FE+DVS+ + ++P LYQ+G KN+FF W + W
Sbjct: 966 YNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICLQFPALYQQGTKNLFFDWSRILGWMCN 1025
Query: 936 SVYQSLVLYNC---VTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITR 992
VY SLV++ + S A N G+ + V T FTC++ N+++ + + T
Sbjct: 1026 GVYASLVIFFLNIGIIYSQAFRDN--GQTADMDAVGTTMFTCIIWAANVQIALTMSHFTW 1083
Query: 993 FHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVI-FVLMSTFYFYFTLILVPVLALL 1051
++ + GSI W+LFV +Y+ M P N++ ++ +L ++ +LV V A+L
Sbjct: 1084 IQHVLIWGSIGMWYLFVAIYS--MMPPSYSGNIYRILDEILAPAPIYWMATLLVTVAAVL 1141
Query: 1052 GDFIFQGVQRWFSPYDYQIVQEM--HRHDPEDRRM 1084
QR+ +P D+ I+QE+ + D ED R+
Sbjct: 1142 PYVAHIAFQRFLNPLDHHIIQEIKYYGRDIEDARL 1176
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/1130 (45%), Positives = 702/1130 (62%), Gaps = 87/1130 (7%)
Query: 13 RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTP 72
RVAN YFL+ +ILS P+SP N + + PL V+ +S+ KEA EDW+RF D+ +NS
Sbjct: 83 HRVANFYFLVAAILSVFPLSPFNKWSMIAPLIFVVGLSMGKEALEDWRRFMQDVKVNSRK 142
Query: 73 VEVLQGQ-RWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETN 131
V +G + W+KL+VGD+V V++D FFPADLL L+S+ DG+CY+ET NLDGETN
Sbjct: 143 ATVHRGDGDFGRRKWKKLRVGDVVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETN 202
Query: 132 LKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRG 191
LK+++ L+ T + F G ++CE PN +LYTF GNL Q PL+P+QILLR
Sbjct: 203 LKVKRCLDVTLPLERDDTFQSFSGTIKCEDPNPNLYTFVGNLEYDGQVYPLDPSQILLRD 262
Query: 192 CSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAI 251
LRNT Y+ G V+F GH+TKVM NS PSKRS +E+++D +I LFA L ++ I ++
Sbjct: 263 SKLRNTSYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFALLVLVSFISSL 322
Query: 252 GSAIFIDKKHYYLGLHNMGN------SVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPIS 305
G A+ + K H MG+ + NP F +V+++ T + LY +IPIS
Sbjct: 323 GFAV-MTKMH-------MGDWWYLRPDKPERLTNPRNPFHAWVVHLITAVLLYGYLIPIS 374
Query: 306 LYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRN 365
LYVSIE +K Q+T +IN+DL MY +ES TPA ARTSNLNEELGQV+ I SDKTGTLT N
Sbjct: 375 LYVSIELVKVLQAT-FINQDLQMYDSESGTPAQARTSNLNEELGQVDTILSDKTGTLTCN 433
Query: 366 LMEFFKCSIGGEIYGTGITEIERGVAQQTGM------------------------KIP-- 399
M+F KCSI G YG +E+E A+Q + K+P
Sbjct: 434 QMDFLKCSIAGTSYGVRASEVELAAAKQMAIDLDEEQGEEVTHLPRTRGRMHGYAKMPSK 493
Query: 400 -----EVERSVKAVHE---------KGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICH 445
E+E + A E KGF+F+D RL+ G W NE N D F R LA+CH
Sbjct: 494 TSSDIELETVITATDEGDQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDILMFLRILAVCH 553
Query: 446 TVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDV 505
T +PE DE + TY+A SPDE A + AA FGF F +RT + +++ E H G+ +
Sbjct: 554 TAIPEVDEDTGKCTYEAESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH---SGQPVER 610
Query: 506 CYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQ 565
Y++LNVL+F S RKR SV+ R G+++L CKGADS+I+ERL+ ++ + T +HL
Sbjct: 611 EYKVLNVLDFTSKRKRMSVIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEATSKHLNG 670
Query: 566 FGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCT 624
+G +GLRTL L+YR L Y WN +F +AK+S+ DR++ L++V++++EK+L L+G T
Sbjct: 671 YGEAGLRTLALSYRKLDETEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGAT 730
Query: 625 AIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNA 684
A+EDKLQ+GVP CI+ LA+AG+KIWVLTGDKMETAINI YAC+L+ MKQ I A
Sbjct: 731 AVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIYI-----A 785
Query: 685 IRDVEERGDPVEIARFMREEVKRELNKCIDEAQQY-IHSISGEKLALIIDGKCLMYALDP 743
+R+ E E A RE + L + I+ +Q + ALIIDGK L YAL+
Sbjct: 786 LRNEEGSSQDPEAA--ARENI---LMQIINASQMIKLEKDPHAAFALIIDGKTLTYALED 840
Query: 744 SLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIG 803
++ L L+++C+SV+CCRVSP QKA VT L K+G K TL+IGDGANDV MIQ A IG
Sbjct: 841 DIKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIG 900
Query: 804 VGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFW 863
VGISG EGMQAVMASDF+IAQFRFL LL+VHG W Y RI +++ YFFYKN+TF LT F+
Sbjct: 901 VGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFY 960
Query: 864 FTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVF 923
F TGFSGQ Y+D + L+NVI TS+PVI LG+FE+DVS+ + ++P LYQ+G KN+F
Sbjct: 961 FEAFTGFSGQAIYNDSYLLLFNVILTSLPVIALGVFEQDVSSEVCLQFPALYQQGPKNLF 1020
Query: 924 FTWRVVAIWAFFSVYQSLVLYNC------VTTSSATGQNSSGKIFGIWDVSTMAFTCVVV 977
F W + W VY S+V+++ V + + GQ + G T FTC++
Sbjct: 1021 FDWYRIIGWMANGVYASVVIFSLNIGIFHVQSFCSGGQTADMDAMG-----TAMFTCIIW 1075
Query: 978 TVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIF-VLMSTF 1036
VN+++ + + T ++ + GSI+ W++F+ L+ M P N+F ++ L
Sbjct: 1076 AVNVQIALTMSHFTWIQHVLIWGSIVTWYIFLALFG--MLPPKVSGNIFHMLSETLAPAP 1133
Query: 1037 YFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMH--RHDPEDRRM 1084
F+ T +LV L + QR +P D+ I+QE+ R D +D M
Sbjct: 1134 IFWLTSLLVIAATTLPYLAYISFQRSLNPLDHHIIQEIKHFRIDVQDECM 1183
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SLK6|ALA6_ARATH Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/1127 (44%), Positives = 688/1127 (61%), Gaps = 80/1127 (7%)
Query: 13 RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTP 72
RVAN YFL+ +ILS P+SP N + + PL V+ +S+ KEA EDW+RF D+ +NS
Sbjct: 84 HRVANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMGKEALEDWRRFMQDVEVNSRK 143
Query: 73 VEVLQGQ-RWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETN 131
V +G + W++++VGDIV V++D FFPADLL L+S+ DG+CY+ET NLDGETN
Sbjct: 144 ASVHKGSGDFGRRTWKRIRVGDIVRVEKDEFFPADLLLLSSSYEDGICYVETMNLDGETN 203
Query: 132 LKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRG 191
LK+++ L+ T E F G ++CE PN +LYTF GNL Q PL+PNQILLR
Sbjct: 204 LKVKRCLDATLALEKDESFQNFSGTIKCEDPNPNLYTFVGNLECDGQVYPLDPNQILLRD 263
Query: 192 CSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAI 251
LRNT Y+ G V+F GH+TKVM NS PSKRS +E+++D +I LFA L + I ++
Sbjct: 264 SKLRNTAYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFALLLTVSFISSL 323
Query: 252 GSAI---FIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYV 308
G A+ + + +YL + NP +V+++ T + LY +IPISLYV
Sbjct: 324 GFAVMTKLLMAEWWYLRPDK-----PESLTNPTNPLYAWVVHLITALLLYGYLIPISLYV 378
Query: 309 SIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 368
SIE +K Q+ +IN+DL +Y +ES TPA ARTSNLNEELGQV+ I SDKTGTLT N M+
Sbjct: 379 SIEVVKVLQA-HFINQDLQLYDSESGTPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 437
Query: 369 FFKCSIGGEIYGTGITEIERGVAQQTGMKIPE---------------------------- 400
F KCSI G YG +E+E A+Q M + E
Sbjct: 438 FLKCSIAGTSYGVRASEVELAAAKQMAMDLEEKGEEVANLSMNKGRTQRYAKLASKTSSD 497
Query: 401 --VERSVKAVHEK---------GFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLP 449
+E V A EK GF+F+D RL+ W NE N D FFR LA+CHT +P
Sbjct: 498 FELETVVTASDEKDQKQNTGVKGFSFEDNRLMNENWLNEPNSDDILMFFRILAVCHTAIP 557
Query: 450 EGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEI 509
E DE TY+A SPDE A + A++ FGF F +RT + +++ E G+ D Y+I
Sbjct: 558 EVDEDTGMCTYEAESPDEVAFLVASREFGFEFTKRTQSSVFIAE-RFSSSGQPVDREYKI 616
Query: 510 LNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSS 569
LN+L+F S RKR S + R +G+++L CKGADS+I+ERL+ ++ T +HL +G +
Sbjct: 617 LNLLDFTSKRKRMSAIVRDEEGQILLLCKGADSIIFERLSKSGKEYLGATSKHLNVYGEA 676
Query: 570 GLRTLCLAYRDLSPDMYERWNEKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCTAIED 628
GLRTL L YR L Y WN +F +AK+S+ DR++ L++V++++EK+L L+G TA+ED
Sbjct: 677 GLRTLALGYRKLDETEYAAWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVED 736
Query: 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDV 688
KLQ+GVP CI+ LA+AG+KIWVLTGDKMETAINI YAC+L+ MKQ I+ + +V
Sbjct: 737 KLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQISIS-----LTNV 791
Query: 689 EERGDPVEIARFMREEVKRELNKCIDEAQQYI--HSISGEKLALIIDGKCLMYALDPSLR 746
EE E A K + I A Q I ALIIDGK L YAL ++
Sbjct: 792 EESSQNSEAA------AKESILMQITNASQMIKIEKDPHAAFALIIDGKTLTYALKDDVK 845
Query: 747 VILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI 806
L L+++C+SV+CCRVSP QKA VT L K+G K TL+IGDGANDV MIQ A IGVGI
Sbjct: 846 YQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGI 905
Query: 807 SGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTF 866
SG EGMQAVMASDF+IAQFRFL LL+VHG W Y RI +++ YFFYKN+TF LT F+F
Sbjct: 906 SGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFEC 965
Query: 867 QTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTW 926
TGFSGQ Y+D + L+NV+ TS+PVI LG+FE+DV + + ++P LYQ+G KN+FF W
Sbjct: 966 FTGFSGQSIYNDSYLLLFNVVLTSLPVISLGVFEQDVPSDVCLQFPALYQQGPKNLFFDW 1025
Query: 927 RVVAIWAFFSVYQSLVLYNC------VTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVN 980
+ W VY S+V++ V + + GQ + G T FTC++ VN
Sbjct: 1026 YRILGWMGNGVYASIVIFTLNLGIFHVQSFRSDGQTADMNAMG-----TAMFTCIIWAVN 1080
Query: 981 LRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIF-VLMSTFYFY 1039
+++ + + T ++ + GSI AW++F+ LY M P N+F ++ +L F+
Sbjct: 1081 VQIALTMSHFTWIQHVMIWGSIGAWYVFLALYG--MLPVKLSGNIFHMLVEILAPAPIFW 1138
Query: 1040 FTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMH--RHDPEDRRM 1084
T +LV L QR +P D+ I+QE+ R D ED RM
Sbjct: 1139 LTSLLVIAATTLPYLFHISYQRSVNPLDHHIIQEIKHFRIDVEDERM 1185
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/1084 (45%), Positives = 685/1084 (63%), Gaps = 31/1084 (2%)
Query: 13 RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTP 72
RRVAN YFL+++ +S +P++P + + PL +V+ +++KE ED +R + D+ N+
Sbjct: 80 RRVANIYFLVVAFVSFSPLAPYTAPSVLAPLLIVIGATMVKEGVEDLRRRKQDVEANNRK 139
Query: 73 VEVL-QGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETN 131
VEVL + +V W+ L+VGD+V V +D +FPADLL L+S+ DG+CY+ET NLDGETN
Sbjct: 140 VEVLGKTGTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSSSYEDGICYVETMNLDGETN 199
Query: 132 LKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRG 191
LK++ ALE T D E F+G ++CE PN LY+F G L + + PL+P QILLR
Sbjct: 200 LKLKHALEITSD---EESIKNFRGMIKCEDPNEHLYSFVGTLYFEGKQYPLSPQQILLRD 256
Query: 192 CSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAI 251
L+NT+Y+ G V+F GH+TKVM N+ + PSKRS +E+K+D++I LF+ L V+ ++
Sbjct: 257 SKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIEKKMDQIIYILFSILIVIAFTGSV 316
Query: 252 GSAIFIDKKHYYLGLHNMGNSVEDDQ---FNPDKRFLVFVLNMFTLITLYSPIIPISLYV 308
I + G D ++P + + T + LY +IPISLYV
Sbjct: 317 FFGIATRRDMSDNGKLRRWYLRPDHTTVFYDPRRAVAAAFFHFLTALMLYGYLIPISLYV 376
Query: 309 SIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 368
SIE +K QS +IN+D MYH E++ PA ARTSNLNEELGQV+ I SDKTGTLT N ME
Sbjct: 377 SIEVVKVLQSI-FINQDQEMYHEETDRPARARTSNLNEELGQVDTILSDKTGTLTCNSME 435
Query: 369 FFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVE--------RSVKAVHEKGFNFDDPRL 420
F KCSI G YG G+TE+E + +Q G+ E + KAV KGFNF D R+
Sbjct: 436 FVKCSIAGTAYGRGMTEVEVALRKQKGLMTQEEVGDNESLSIKEQKAV--KGFNFWDERI 493
Query: 421 LRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFF 480
+ G W N+ N + ++FFR LAICHT +P+ + ITY+A SPDEAA V A++ GF
Sbjct: 494 VDGQWINQPNAELIQKFFRVLAICHTAIPDVNSDTGEITYEAESPDEAAFVIASRELGFE 553
Query: 481 FYRRTPTMIYVRESHVEKM-GKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKG 539
F+ R+ T I + E ++ M G+ D YE+L+VLEF+S+RKR SV+ R + RL+L KG
Sbjct: 554 FFSRSQTSISLHE--IDHMTGEKVDRVYELLHVLEFSSSRKRMSVIVRNPENRLLLLSKG 611
Query: 540 ADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSS 599
ADSV+++RLA ++ T+EH++++ +GLRTL + YR++ D Y W E+F+ AK+
Sbjct: 612 ADSVMFKRLAKHGRQNERETKEHIKKYAEAGLRTLVITYREIDEDEYIVWEEEFLNAKTL 671
Query: 600 L-RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMET 658
+ DR+ +D A+ IEKDL L+G TA+EDKLQ+GVP CIE L++AG+KIWVLTGDK ET
Sbjct: 672 VTEDRDALIDAAADKIEKDLILLGSTAVEDKLQKGVPDCIEKLSQAGVKIWVLTGDKTET 731
Query: 659 AINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQ 718
AINI YAC+L+ MKQ ++T +++ I +E++GD +A+ + +K++L + + +
Sbjct: 732 AINIGYACSLLREGMKQILVTLDSSDIEALEKQGDKEAVAKASFQSIKKQLREGMSQTAA 791
Query: 719 YIHSISGEK---LALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSL 775
+ + E L+IDGK L YALD L L L++ C+SV+CCR SP QKA VT L
Sbjct: 792 VTDNSAKENSEMFGLVIDGKSLTYALDSKLEKEFLELAIRCNSVICCRSSPKQKALVTRL 851
Query: 776 VKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVH 835
VK G + TL+IGDGANDV M+Q A IGVGISG EGMQAVMASDFAIAQFRFL LLLVH
Sbjct: 852 VKNGTGRTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVH 911
Query: 836 GRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIM 895
G W Y RI ++ YFFYKNL F T FW+ FSG+ Y+DW+ S YNV FTS+PVI
Sbjct: 912 GHWCYRRITLMICYFFYKNLAFGFTLFWYEAYASFSGKPAYNDWYMSCYNVFFTSLPVIA 971
Query: 896 LGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQ 955
LG+F++DVSA L KYP LYQEG++NV F+W + W V S++++ + AT
Sbjct: 972 LGVFDQDVSARLCLKYPLLYQEGVQNVLFSWERILGWMLNGVISSMIIFFLTINTMATQA 1031
Query: 956 -NSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTG 1014
G++ + ++ VV TVN ++ + N T + + GSI W+LF+ +Y G
Sbjct: 1032 FRKDGQVVDYSVLGVTMYSSVVWTVNCQMAISINYFTWIQHCFIWGSIGVWYLFLVIY-G 1090
Query: 1015 IMTPNDRQENVFFVIFVLMS--TFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQ 1072
+ P F +FV S + ++ L LV ALL F ++ Q F P + I+
Sbjct: 1091 SLPPT--FSTTAFQVFVETSAPSPIYWLVLFLVVFSALLPYFTYRAFQIKFRPMYHDIIV 1148
Query: 1073 EMHR 1076
E R
Sbjct: 1149 EQRR 1152
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1159 | ||||||
| 449434855 | 1227 | PREDICTED: phospholipid-transporting ATP | 0.994 | 0.939 | 0.829 | 0.0 | |
| 356570066 | 1227 | PREDICTED: phospholipid-transporting ATP | 0.993 | 0.938 | 0.814 | 0.0 | |
| 357516581 | 1212 | Phospholipid-transporting ATPase [Medica | 0.993 | 0.950 | 0.815 | 0.0 | |
| 224107853 | 1199 | aminophospholipid ATPase [Populus tricho | 0.988 | 0.955 | 0.823 | 0.0 | |
| 255558304 | 1219 | Phospholipid-transporting ATPase, putati | 0.989 | 0.940 | 0.824 | 0.0 | |
| 359495585 | 1183 | PREDICTED: phospholipid-transporting ATP | 0.968 | 0.948 | 0.834 | 0.0 | |
| 356524099 | 1227 | PREDICTED: phospholipid-transporting ATP | 0.990 | 0.935 | 0.813 | 0.0 | |
| 15218927 | 1213 | phospholipid-transporting ATPase 3 [Arab | 0.988 | 0.944 | 0.791 | 0.0 | |
| 297840577 | 1215 | hypothetical protein ARALYDRAFT_475328 [ | 0.988 | 0.943 | 0.791 | 0.0 | |
| 449478491 | 1061 | PREDICTED: LOW QUALITY PROTEIN: phosphol | 0.914 | 0.999 | 0.836 | 0.0 |
| >gi|449434855|ref|XP_004135211.1| PREDICTED: phospholipid-transporting ATPase 3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2001 bits (5185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 961/1159 (82%), Positives = 1066/1159 (91%), Gaps = 6/1159 (0%)
Query: 2 FLPFYQKGCLN--RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDW 59
F F+ KG RRVAN YFL ISILSTTP+SPV+P+TNVVPLSLVLLVSLIKEA+EDW
Sbjct: 72 FFTFFPKGLFEQFRRVANLYFLTISILSTTPISPVHPITNVVPLSLVLLVSLIKEAFEDW 131
Query: 60 KRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVC 119
KRFQNDM IN+ V+VLQ Q+W S+PW++LQVGDIV V+QDGFFPADLLFLASTN DGVC
Sbjct: 132 KRFQNDMAINNNLVDVLQDQKWESVPWKRLQVGDIVRVRQDGFFPADLLFLASTNPDGVC 191
Query: 120 YIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQT 179
YIETANLDGETNLKIRKALE+TWDYLTPEKASEFKGEVQCEQPNNSLYTFTGN+I+QKQT
Sbjct: 192 YIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNVIIQKQT 251
Query: 180 LPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALF 239
LPL+PNQ+LLRGCSLRNTEYI+GAVIF GHETKVMMN+MN+PSKRSTLE+KLDKLIL LF
Sbjct: 252 LPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLEKKLDKLILTLF 311
Query: 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYS 299
ATL VMCLI AIGS +F+++++YYL L G ++QFNP RFLV +L MFTLITLYS
Sbjct: 312 ATLFVMCLIGAIGSGVFVNEEYYYLALDKGG----ENQFNPRNRFLVIILTMFTLITLYS 367
Query: 300 PIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKT 359
IIPISLYVSIE IKF QSTQYINKDL+M+HA+SNTPA ARTSNLNEELGQVEYIFSDKT
Sbjct: 368 TIIPISLYVSIEMIKFIQSTQYINKDLNMFHADSNTPALARTSNLNEELGQVEYIFSDKT 427
Query: 360 GTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPR 419
GTLTRNLMEFFKCSIGGE+YGTGITEIERG+A+Q G+K+ E +S AV EKGFNFDDPR
Sbjct: 428 GTLTRNLMEFFKCSIGGEVYGTGITEIERGIAEQNGLKVEEAHKSANAVQEKGFNFDDPR 487
Query: 420 LLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGF 479
L+RGAWRNE N D CKEFFRCLAICHTVLPEGDESPE+ITYQAASPDEAALV AAKNFGF
Sbjct: 488 LMRGAWRNEPNSDLCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVAAAKNFGF 547
Query: 480 FFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKG 539
FFYRRTPT IYVRESHVEKMGK+QDV YEILNVLEFNS RKRQSVVCRY+DGRL+LYCKG
Sbjct: 548 FFYRRTPTTIYVRESHVEKMGKIQDVSYEILNVLEFNSVRKRQSVVCRYSDGRLILYCKG 607
Query: 540 ADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSS 599
AD+V+YERLA GN+DLK +TREHLE+FGSSGLRTLCLAYRDL PD+YE WNEKFIQAKSS
Sbjct: 608 ADTVVYERLAGGNDDLKNITREHLEKFGSSGLRTLCLAYRDLHPDVYESWNEKFIQAKSS 667
Query: 600 LRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETA 659
LRDRE+KLDEVAELIEKDL LIGCTAIEDKLQEGVP CI+TL+RAGIKIWVLTGDKMETA
Sbjct: 668 LRDREKKLDEVAELIEKDLILIGCTAIEDKLQEGVPNCIQTLSRAGIKIWVLTGDKMETA 727
Query: 660 INIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQY 719
INIAYACNLINNEMKQFII+SET+ IR+VE RGD VE+ARF+REEVK+EL +C++EAQ
Sbjct: 728 INIAYACNLINNEMKQFIISSETDEIREVENRGDQVELARFIREEVKKELKRCLEEAQLC 787
Query: 720 IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG 779
+HSI KLAL+IDGKCLMYALDPSLRV LL LSLNCSSVVCCRVSPLQKAQVTSLVKKG
Sbjct: 788 LHSIPPPKLALVIDGKCLMYALDPSLRVTLLKLSLNCSSVVCCRVSPLQKAQVTSLVKKG 847
Query: 780 ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWS 839
A+KITLSIGDGANDVSMIQAAH+G+GISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWS
Sbjct: 848 AQKITLSIGDGANDVSMIQAAHVGIGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWS 907
Query: 840 YLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLF 899
YLRICKVV YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFT++PVI++GLF
Sbjct: 908 YLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLF 967
Query: 900 EKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSG 959
+KDVSA+LSKKYP+LY+EGI+NVFF WRVV WAFFSVYQSLV Y VT SS++ Q+SSG
Sbjct: 968 DKDVSAALSKKYPELYREGIRNVFFKWRVVTTWAFFSVYQSLVFYYFVTASSSSSQSSSG 1027
Query: 960 KIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1019
K+FG+WD+STM FTC+VVTVNLRLLM+CN+ITR+HYITVGGSILAWFLF+FLY+GIMTP+
Sbjct: 1028 KVFGLWDISTMTFTCIVVTVNLRLLMICNSITRWHYITVGGSILAWFLFIFLYSGIMTPH 1087
Query: 1020 DRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHRHDP 1079
DRQENV+FVI+VLMST YFY +ILVPV+ALL DF +QG+QRWF PYDYQIVQE+HRH+P
Sbjct: 1088 DRQENVYFVIYVLMSTLYFYVAVILVPVVALLCDFAYQGLQRWFFPYDYQIVQEIHRHEP 1147
Query: 1080 EDRRMADLVEIGNQLTPEEARSYAIAQLPRELSKHTGFAFDSPGYESFFASQLGIYAPQK 1139
E R A L+EI N LTPEEARSYA++QLPRELSKHTGFAFDSPGYESFFA+QLGIYAPQK
Sbjct: 1148 EGRGTAGLLEIQNHLTPEEARSYAMSQLPRELSKHTGFAFDSPGYESFFAAQLGIYAPQK 1207
Query: 1140 PWDVARRASMRSRPRIPKK 1158
WDVARRAS++SRP+I +K
Sbjct: 1208 AWDVARRASVKSRPKIREK 1226
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356570066|ref|XP_003553212.1| PREDICTED: phospholipid-transporting ATPase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1979 bits (5127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 946/1161 (81%), Positives = 1061/1161 (91%), Gaps = 9/1161 (0%)
Query: 2 FLPFYQKGCLN--RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDW 59
F F KG RRVAN YFLMISILSTTP+SPV+P+TNV+PLSLVLLVSLIKEA+EDW
Sbjct: 71 FFTFLPKGLFEQFRRVANLYFLMISILSTTPISPVSPITNVLPLSLVLLVSLIKEAFEDW 130
Query: 60 KRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVC 119
KRFQNDM++N+ ++VLQ Q+W SIPW+KLQVGD+V VKQD FFPADLLFLASTNADGVC
Sbjct: 131 KRFQNDMSVNNNTIDVLQDQKWGSIPWKKLQVGDLVKVKQDAFFPADLLFLASTNADGVC 190
Query: 120 YIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQT 179
YIETANLDGETNLKIRKALE+TWDY+TPEKASEFKGE+QCEQPNNSLYTFTGNLI QKQT
Sbjct: 191 YIETANLDGETNLKIRKALEKTWDYVTPEKASEFKGEIQCEQPNNSLYTFTGNLITQKQT 250
Query: 180 LPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALF 239
LPL+PNQILLRGCSLRNTEYI+G VIF GHETKVMMN+MN+PSKRSTLERKLDKLIL LF
Sbjct: 251 LPLSPNQILLRGCSLRNTEYIVGVVIFTGHETKVMMNTMNVPSKRSTLERKLDKLILTLF 310
Query: 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDD--QFNPDKRFLVFVLNMFTLITL 297
ATL VMC I A+GSAIF++KK++YL L +S E+ QFNP RFLVF+L MFTLITL
Sbjct: 311 ATLFVMCFIGAVGSAIFVNKKYFYLHL----DSSEEGSAQFNPKNRFLVFLLTMFTLITL 366
Query: 298 YSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSD 357
YS IIPISLYVSIE IKF QSTQ+INKDL MYH E+NTPA ARTSNLNEELGQVEYIFSD
Sbjct: 367 YSTIIPISLYVSIEMIKFIQSTQFINKDLCMYHNETNTPALARTSNLNEELGQVEYIFSD 426
Query: 358 KTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDD 417
KTGTLTRNLMEFFKCSIGGE+YG G+TEIERG+A++ GMKI E RS AVHE+GFNFDD
Sbjct: 427 KTGTLTRNLMEFFKCSIGGEVYGNGVTEIERGLAERNGMKIEE-NRSPNAVHERGFNFDD 485
Query: 418 PRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNF 477
R++RGAWRNE NPD CKEFFRCLAICHTVLPEGDESPE+I YQAASPDEAALV AAK+F
Sbjct: 486 ARIMRGAWRNEPNPDVCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKHF 545
Query: 478 GFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYC 537
GFFFYRRTPTMIYVRESHVEKMGK+QDV YEILNVLEFNSTRKRQSVVCRY DGRLVLYC
Sbjct: 546 GFFFYRRTPTMIYVRESHVEKMGKVQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYC 605
Query: 538 KGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAK 597
KGAD+V+YERLA+GN ++KKVTREHLEQFGS+GLRTLCLAY++L PD+YE WNEKFIQAK
Sbjct: 606 KGADNVVYERLADGNNNIKKVTREHLEQFGSAGLRTLCLAYKELHPDVYESWNEKFIQAK 665
Query: 598 SSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKME 657
SSL DRE+KLDEVAELIE DL LIG TAIEDKLQEGVPACIETL RAGIKIWVLTGDK+E
Sbjct: 666 SSLNDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIE 725
Query: 658 TAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQ 717
TAINIAYACNLINNEMKQF+I+SET+AIR+VE+RGD VEIARF+ EEVKREL KC++EAQ
Sbjct: 726 TAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQVEIARFIIEEVKRELKKCLEEAQ 785
Query: 718 QYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVK 777
S+SG KLAL+IDGKCLMYALDPSLRV+LLNLSLNC +VVCCRVSPLQKAQVTS+VK
Sbjct: 786 SSFQSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSMVK 845
Query: 778 KGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGR 837
KGA+KITLSIGDGANDVSMIQAAH+GVGISG EGMQAVMASDFAIAQFR+L DLLLVHGR
Sbjct: 846 KGAQKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLADLLLVHGR 905
Query: 838 WSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLG 897
WSYLRICKVV+YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFT++PVI++G
Sbjct: 906 WSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVG 965
Query: 898 LFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNS 957
LF+KDVS+SLSKKYP+LY EGI+NVFF W+VVAIWAFFSVYQSL+ + V+T++ + +NS
Sbjct: 966 LFDKDVSSSLSKKYPELYMEGIRNVFFKWKVVAIWAFFSVYQSLIFFYFVSTTNLSAKNS 1025
Query: 958 SGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMT 1017
+GK+FG+WDVSTMAFTCVV+TVNLRLLM+CN+ITR+HYI+VGGSILAWF+F+F+Y+GI T
Sbjct: 1026 AGKVFGLWDVSTMAFTCVVITVNLRLLMICNSITRWHYISVGGSILAWFIFIFIYSGIST 1085
Query: 1018 PNDRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHRH 1077
P DRQEN++FVI+VLMSTFYFY L+LVP+ AL DF++QGVQRWF PYDYQI+QEMHR
Sbjct: 1086 PYDRQENIYFVIYVLMSTFYFYVMLLLVPIAALFCDFVYQGVQRWFFPYDYQIIQEMHRD 1145
Query: 1078 DPEDRRMADLVEIGNQLTPEEARSYAIAQLPRELSKHTGFAFDSPGYESFFASQLGIYAP 1137
+ + A L+EIGNQLTP EARS+AI+QLPRE+SKHTGFAFDSPGYESFFASQLG+YAP
Sbjct: 1146 EVDSTGRAQLLEIGNQLTPAEARSHAISQLPREISKHTGFAFDSPGYESFFASQLGVYAP 1205
Query: 1138 QKPWDVARRASMRSRPRIPKK 1158
K WDVARRASMRSRP+I ++
Sbjct: 1206 PKAWDVARRASMRSRPKIGQQ 1226
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357516581|ref|XP_003628579.1| Phospholipid-transporting ATPase [Medicago truncatula] gi|355522601|gb|AET03055.1| Phospholipid-transporting ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1976 bits (5118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 948/1162 (81%), Positives = 1059/1162 (91%), Gaps = 10/1162 (0%)
Query: 2 FLPFYQKGCLN--RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDW 59
F F KG RRVAN YFL ISILSTTP+SPV+P+TNV+PLSLVLLVSLIKEA+EDW
Sbjct: 55 FFTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSLVLLVSLIKEAFEDW 114
Query: 60 KRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVC 119
KRFQNDM+IN+ ++VLQ Q+WVSIPW+KLQVGDI+ VKQDGFFPADL+FLASTN DGVC
Sbjct: 115 KRFQNDMSINNNMIDVLQDQKWVSIPWKKLQVGDIIKVKQDGFFPADLIFLASTNVDGVC 174
Query: 120 YIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQT 179
YIETANLDGETNLKIRKALE+TWDYLTPEKASEFKGE+QCEQPNNSLYTFTGNL++QKQT
Sbjct: 175 YIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEIQCEQPNNSLYTFTGNLLIQKQT 234
Query: 180 LPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALF 239
LPL+PNQILLRGCSLRNTEYI+G VIF G ETKVMMNSMN+PSKRSTLERKLDKLILALF
Sbjct: 235 LPLSPNQILLRGCSLRNTEYIVGVVIFTGQETKVMMNSMNVPSKRSTLERKLDKLILALF 294
Query: 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDD--QFNPDKRFLVFVLNMFTLITL 297
ATL +MC I AIGSAIF++KK++YL L +S E+ QFNP RFLVF+L MFTLITL
Sbjct: 295 ATLFMMCFIGAIGSAIFVNKKYFYLHL----DSSEEGSAQFNPGNRFLVFILTMFTLITL 350
Query: 298 YSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSD 357
YS IIPISLYVSIE IKF QSTQ+INKDL MYH ESNTPA ARTSNLNEELGQVEYIFSD
Sbjct: 351 YSTIIPISLYVSIEMIKFIQSTQFINKDLGMYHKESNTPALARTSNLNEELGQVEYIFSD 410
Query: 358 KTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDD 417
KTGTLTRNLMEFFKCSIG E+YG G+TEIERG+A++ GMKI E RS AV E+GFNF+D
Sbjct: 411 KTGTLTRNLMEFFKCSIGAEVYGNGVTEIERGLAERNGMKIEE-NRSPNAVQERGFNFED 469
Query: 418 PRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDE-SPERITYQAASPDEAALVTAAKN 476
RL+RGAWRNE NPDACKEFFRCLAICHTVLPEGDE SPE+I YQAASPDEAALV AAK+
Sbjct: 470 ARLMRGAWRNEPNPDACKEFFRCLAICHTVLPEGDEKSPEKIKYQAASPDEAALVIAAKH 529
Query: 477 FGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLY 536
FGFFFYRRTPTMIYVRESHVEKMGK+QD+ YEILNVLEFNSTRKRQSVVCRY DGRLVLY
Sbjct: 530 FGFFFYRRTPTMIYVRESHVEKMGKVQDIPYEILNVLEFNSTRKRQSVVCRYPDGRLVLY 589
Query: 537 CKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQA 596
CKGAD+VIYERLA+ N D+KK+TRE+LEQFGSSGLRTLCLAYR+L P++YE WNEKFIQA
Sbjct: 590 CKGADTVIYERLADSNSDMKKITREYLEQFGSSGLRTLCLAYRELHPNVYESWNEKFIQA 649
Query: 597 KSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKM 656
KS+L DRE+KLDEVAELIE +L LIG TAIEDKLQEGVPACIETL RAGIKIWVLTGDK+
Sbjct: 650 KSTLHDREKKLDEVAELIENNLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKI 709
Query: 657 ETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEA 716
ETAINIAYACNLINNEMKQF+I+SET+AIR+VE+RGD VEIARF++EEVKR+L KC++EA
Sbjct: 710 ETAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQVEIARFIKEEVKRQLKKCLEEA 769
Query: 717 QQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLV 776
Q Y H++SG KLAL+IDGKCLMYALDP+LRV+LLNLSLNC +VVCCRVSPLQKAQVTS+V
Sbjct: 770 QSYFHTVSGPKLALVIDGKCLMYALDPTLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSMV 829
Query: 777 KKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHG 836
KKGA+KITLSIGDGANDVSMIQAAH+GVGISG EGMQAVMASDFAIAQFR+L DLLLVHG
Sbjct: 830 KKGAKKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLEDLLLVHG 889
Query: 837 RWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIML 896
RWSYLRICKVV+YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFT++PVIM+
Sbjct: 890 RWSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIMV 949
Query: 897 GLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQN 956
GLF+KDVSASLSKKYP+LY EGI+NVFF W+VVAIWAFFSVYQSL+ + V+T++ + +N
Sbjct: 950 GLFDKDVSASLSKKYPELYMEGIRNVFFKWKVVAIWAFFSVYQSLIFFYFVSTTNLSAKN 1009
Query: 957 SSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIM 1016
S GK FG+WDVSTMAFTCVVVTVNLRLLM+CN+ITR+HYI+VGGSILAWF+F+F+Y+GI
Sbjct: 1010 SDGKTFGLWDVSTMAFTCVVVTVNLRLLMICNSITRWHYISVGGSILAWFIFIFIYSGIT 1069
Query: 1017 TPNDRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHR 1076
TP DRQENV+FVI+VLMST YFY TL+LVPV AL DF++QGVQRWF PYDYQIVQE+HR
Sbjct: 1070 TPYDRQENVYFVIYVLMSTVYFYITLLLVPVAALFCDFVYQGVQRWFFPYDYQIVQEIHR 1129
Query: 1077 HDPEDRRMADLVEIGNQLTPEEARSYAIAQLPRELSKHTGFAFDSPGYESFFASQLGIYA 1136
H+ E A L+EIGN LTP EARSYAI+QLPRELSKHTGFAFDSPGYESFFA+QLG YA
Sbjct: 1130 HEIESTGRAQLLEIGNHLTPTEARSYAISQLPRELSKHTGFAFDSPGYESFFAAQLGAYA 1189
Query: 1137 PQKPWDVARRASMRSRPRIPKK 1158
P K WDVARRASM+SRP+ ++
Sbjct: 1190 PPKAWDVARRASMKSRPKTEQQ 1211
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224107853|ref|XP_002314626.1| aminophospholipid ATPase [Populus trichocarpa] gi|222863666|gb|EEF00797.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1973 bits (5112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 954/1159 (82%), Positives = 1064/1159 (91%), Gaps = 13/1159 (1%)
Query: 2 FLPFYQKGCLN--RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDW 59
F F KG RRVANCYFL+ISILS TP+SPVNPVTNVVPLSLVLLVSLIKEA+EDW
Sbjct: 52 FFTFVPKGLFEQFRRVANCYFLLISILSMTPISPVNPVTNVVPLSLVLLVSLIKEAFEDW 111
Query: 60 KRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVC 119
KRFQNDM IN++ ++VLQ +WV++PW+KLQVGDIV VK+DGFFPADLLFLASTNADGVC
Sbjct: 112 KRFQNDMVINNSLIDVLQDDKWVAVPWKKLQVGDIVRVKKDGFFPADLLFLASTNADGVC 171
Query: 120 YIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQT 179
Y ETANLDGETNLKIRKALERTWDYLTP+KA+EFKGE+QCEQPNNSLYTFTGNLI QKQT
Sbjct: 172 YTETANLDGETNLKIRKALERTWDYLTPDKAAEFKGEMQCEQPNNSLYTFTGNLIFQKQT 231
Query: 180 LPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALF 239
LPL PNQILLRGCSLRNTEYI+GAVIF GHETKVMMNSMN+PSKRSTLERKLDKLILALF
Sbjct: 232 LPLTPNQILLRGCSLRNTEYIVGAVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILALF 291
Query: 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYS 299
ATL +MCLI AIGS IFI++K+YYL L + +FNP RF V L +FTLITLYS
Sbjct: 292 ATLFIMCLIGAIGSGIFINRKYYYLRL----DKAVAAEFNPGNRF-VAALTLFTLITLYS 346
Query: 300 PIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKT 359
IIPISLYVSIE IKF QSTQ+INKDLHMYHAE+NTPASARTSNLNEELGQVEYIFSDKT
Sbjct: 347 TIIPISLYVSIEMIKFIQSTQFINKDLHMYHAETNTPASARTSNLNEELGQVEYIFSDKT 406
Query: 360 GTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPR 419
GTLTRNLMEFFKCSIGGE+YG+G+TEIE G AQ+TG+K EV +S A+ EKGFNFDD R
Sbjct: 407 GTLTRNLMEFFKCSIGGEVYGSGVTEIELGGAQRTGIKFQEVRKSSTAIQEKGFNFDDHR 466
Query: 420 LLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGF 479
L+RGAWRNE N D CKEFFRCLAICHTVLPEGDESPE+ITYQAASPDEAALVTAAKNFGF
Sbjct: 467 LMRGAWRNEPNSDTCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVTAAKNFGF 526
Query: 480 FFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKG 539
FFYRRTPTMI+VRESHVEKMGK+QDV YEILNVLEFNSTRKRQSVVCRY +GRLVLYCKG
Sbjct: 527 FFYRRTPTMIHVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRYPNGRLVLYCKG 586
Query: 540 ADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSS 599
AD+VIYERLA GN+DLKKVTR HLEQFGS+GLRTLCLAYRDLSP+ YE WNEKFIQAKSS
Sbjct: 587 ADTVIYERLAAGNDDLKKVTRAHLEQFGSAGLRTLCLAYRDLSPETYESWNEKFIQAKSS 646
Query: 600 LRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETA 659
LRDRE+KLDEVAEL+EKDL LIG TAIEDKLQEGVPACIETL+RAGIK+WVLTGDKMETA
Sbjct: 647 LRDREKKLDEVAELVEKDLILIGSTAIEDKLQEGVPACIETLSRAGIKVWVLTGDKMETA 706
Query: 660 INIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQY 719
INIAYACNLINN+MKQFII+SET+AIR+VE RGD VEIARF++EEVK+EL KC++EAQ Y
Sbjct: 707 INIAYACNLINNDMKQFIISSETDAIREVENRGDQVEIARFIKEEVKKELKKCLEEAQHY 766
Query: 720 IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG 779
+ ++SG KLAL+IDGKCLMYALDP+LRV+LLNLSLNC SVVCCRVSPLQKAQVTSLVKKG
Sbjct: 767 LRTVSGPKLALVIDGKCLMYALDPTLRVMLLNLSLNCHSVVCCRVSPLQKAQVTSLVKKG 826
Query: 780 ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWS 839
ARKITLSIGDGANDVSMIQAAHIG+GISG EGMQAVMASDFAIAQFRFLTDLLLVHGRWS
Sbjct: 827 ARKITLSIGDGANDVSMIQAAHIGIGISGLEGMQAVMASDFAIAQFRFLTDLLLVHGRWS 886
Query: 840 YLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLF 899
YLRICKV+ YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFT++PVI++GLF
Sbjct: 887 YLRICKVITYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLF 946
Query: 900 EKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSG 959
+KDVSASLSKKYP+LY+EGI+NVFF WRVV WA FSVYQSLV Y+ VT SSA+G+NSSG
Sbjct: 947 DKDVSASLSKKYPELYKEGIRNVFFKWRVVITWACFSVYQSLVFYHFVTISSASGKNSSG 1006
Query: 960 KIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1019
KIFG+WD+STMAFTCVV+TVNLRLLM+CN+ITR+HYI+VGGSILAWF+F+F+Y+ +
Sbjct: 1007 KIFGLWDISTMAFTCVVITVNLRLLMICNSITRWHYISVGGSILAWFMFIFIYSVL---- 1062
Query: 1020 DRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHRHDP 1079
+ENVFFVI+VLMST YFY T++LVP++ALLGDFI+QG+QR F PYDYQIVQE+HRH+P
Sbjct: 1063 --RENVFFVIYVLMSTIYFYLTVLLVPIVALLGDFIYQGIQRCFFPYDYQIVQEIHRHEP 1120
Query: 1080 EDRRMADLVEIGNQLTPEEARSYAIAQLPRELSKHTGFAFDSPGYESFFASQLGIYAPQK 1139
+D A L+E+ +QLTP+E RSYAI+QLPRE+SKHTGFAFDSPGYESFFA+QLG+YAPQK
Sbjct: 1121 DDNTRAGLLEVASQLTPQEERSYAISQLPREISKHTGFAFDSPGYESFFAAQLGVYAPQK 1180
Query: 1140 PWDVARRASMRSRPRIPKK 1158
WDVARRASM+S+P++PK+
Sbjct: 1181 AWDVARRASMKSKPKMPKR 1199
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255558304|ref|XP_002520179.1| Phospholipid-transporting ATPase, putative [Ricinus communis] gi|223540671|gb|EEF42234.1| Phospholipid-transporting ATPase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1971 bits (5107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 956/1159 (82%), Positives = 1056/1159 (91%), Gaps = 12/1159 (1%)
Query: 2 FLPFYQKGCLN--RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDW 59
FL F KG RRVANCYFL+ISILS TP+SPVNPVTNVVPLSLVLLVSLIKEA+EDW
Sbjct: 70 FLTFLPKGLFEQFRRVANCYFLLISILSMTPISPVNPVTNVVPLSLVLLVSLIKEAFEDW 129
Query: 60 KRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVC 119
KRFQNDM IN++PVEVLQ Q+W +IPW+KLQVGDI+ VKQDGFFPADLLFLA+TN DGVC
Sbjct: 130 KRFQNDMVINNSPVEVLQDQKWETIPWKKLQVGDIIKVKQDGFFPADLLFLAATNPDGVC 189
Query: 120 YIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQT 179
YIETANLDGETNLKIRKALERTWDYLTPEKA+EFKGEVQCEQPNNSLYTFTGNLI+QKQT
Sbjct: 190 YIETANLDGETNLKIRKALERTWDYLTPEKAAEFKGEVQCEQPNNSLYTFTGNLIIQKQT 249
Query: 180 LPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALF 239
LPL+PNQ+LLRGCSLRNTE+I+GAVIF GHETKVMMNSMN+PSKRSTLERKLDKLIL LF
Sbjct: 250 LPLSPNQLLLRGCSLRNTEFIVGAVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILTLF 309
Query: 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYS 299
+L +MCLI AI S IFI+ K+YYLGL + +FNP RF V L +FTLITLYS
Sbjct: 310 GSLFIMCLIGAIASGIFINHKYYYLGLDEGAPT----EFNPSNRFGVAALTLFTLITLYS 365
Query: 300 PIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKT 359
IIPISLYVSIE IKF Q TQ+INKDLHMYHAE+NT A ARTSNLNEELGQVEYIFSDKT
Sbjct: 366 TIIPISLYVSIEMIKFIQCTQFINKDLHMYHAETNTAALARTSNLNEELGQVEYIFSDKT 425
Query: 360 GTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPR 419
GTLTRNLMEFFKCSIGGE+YGTGITEIERG AQ GMK+ EV + V A+HEKGFNFDD R
Sbjct: 426 GTLTRNLMEFFKCSIGGEVYGTGITEIERGGAQWNGMKVQEVHKPVGAIHEKGFNFDDSR 485
Query: 420 LLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGF 479
L+RGAWRNE N D CKEFFRCLAICHTVLPEGDESPE+ITYQAASPDEAALVTAAKNFGF
Sbjct: 486 LMRGAWRNEPNADTCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVTAAKNFGF 545
Query: 480 FFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKG 539
FFYRRTPTMIYVRESH EKMGK+QDV YEILNVLEFNSTRKRQSVVCRY DGRLVLYCKG
Sbjct: 546 FFYRRTPTMIYVRESHAEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKG 605
Query: 540 ADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSS 599
AD+VI+ERLA+GN+ LKK+TREHLEQFG +GLRTLCLAYRDLSP++YE WNEKFIQAKSS
Sbjct: 606 ADTVIFERLADGNDGLKKITREHLEQFGCAGLRTLCLAYRDLSPELYESWNEKFIQAKSS 665
Query: 600 LRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETA 659
LRDRE+KLDEVAELIEK+L LIG TAIEDKLQEGVP CIETL+RAGIKIWVLTGDKMETA
Sbjct: 666 LRDREKKLDEVAELIEKELILIGSTAIEDKLQEGVPGCIETLSRAGIKIWVLTGDKMETA 725
Query: 660 INIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQY 719
INIAYACNLINNEMKQFII+SET+AIR+VE +GD VEIARF++EEVK+EL KC++EAQ
Sbjct: 726 INIAYACNLINNEMKQFIISSETDAIREVENKGDQVEIARFIKEEVKKELKKCLEEAQHS 785
Query: 720 IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG 779
++++SG KLAL+IDGKCLMYALDP+LR +LLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG
Sbjct: 786 LNTVSGPKLALVIDGKCLMYALDPTLRAMLLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG 845
Query: 780 ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWS 839
ARKITLSIGDGANDVSMIQAAHIGVGISG EGMQAVMASDFAIAQF +L DLLLVHGRWS
Sbjct: 846 ARKITLSIGDGANDVSMIQAAHIGVGISGLEGMQAVMASDFAIAQFCYLADLLLVHGRWS 905
Query: 840 YLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLF 899
YLRICKV+ YFFYKNLTFTLTQFWFTF TGFSGQRFYDDWFQSLYNVIFT++PVI++GLF
Sbjct: 906 YLRICKVITYFFYKNLTFTLTQFWFTFHTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLF 965
Query: 900 EKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSG 959
+KDVSASLSKKYP+LY+EGI+N FF WRVV WA FSVYQSL+ Y+ VTTSSA+G+NSSG
Sbjct: 966 DKDVSASLSKKYPELYKEGIRNAFFKWRVVVTWACFSVYQSLIFYHFVTTSSASGKNSSG 1025
Query: 960 KIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1019
++FG+WDVSTMAFTCVVVTVNLRLLM+CN+ITR+HYI+VGGSILAWF F+F+Y+
Sbjct: 1026 RMFGLWDVSTMAFTCVVVTVNLRLLMICNSITRWHYISVGGSILAWFTFIFVYSIF---- 1081
Query: 1020 DRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHRHDP 1079
+ENVFFVI+VLMSTFYFY TL+LVP++ALLGDFI+QG QRWF PYDYQIVQE+HRH+P
Sbjct: 1082 --RENVFFVIYVLMSTFYFYLTLLLVPIVALLGDFIYQGAQRWFFPYDYQIVQEIHRHEP 1139
Query: 1080 EDRRMADLVEIGNQLTPEEARSYAIAQLPRELSKHTGFAFDSPGYESFFASQLGIYAPQK 1139
+D A +EI N+LTP+E RSYAIAQLPRE+SKHTGFAFDSPGYESFFA+QLGIYAPQK
Sbjct: 1140 DDSSRAGFLEIENRLTPQEERSYAIAQLPREISKHTGFAFDSPGYESFFAAQLGIYAPQK 1199
Query: 1140 PWDVARRASMRSRPRIPKK 1158
WDVARRASMRS+P+ PKK
Sbjct: 1200 AWDVARRASMRSQPKTPKK 1218
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359495585|ref|XP_002265337.2| PREDICTED: phospholipid-transporting ATPase 3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1969 bits (5102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 940/1126 (83%), Positives = 1038/1126 (92%), Gaps = 4/1126 (0%)
Query: 33 PVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVG 92
PV+P+TNVVPLSLVL VSL+KEA+EDWKR QND IN+ ++VLQ Q+W IPW+KLQVG
Sbjct: 61 PVHPITNVVPLSLVLFVSLVKEAFEDWKRLQNDKAINNALIDVLQDQKWERIPWKKLQVG 120
Query: 93 DIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASE 152
DIV VKQDGFFPAD+LFLA TN DGVCYIETANLDGETNLKIRKALE+TWDYLTPEKASE
Sbjct: 121 DIVKVKQDGFFPADILFLAGTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASE 180
Query: 153 FKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETK 212
FKGEVQCEQPNNSLYTFTGNLI+QKQTLPL+PNQILLRGCSLRNTEYI+GAVIF GHETK
Sbjct: 181 FKGEVQCEQPNNSLYTFTGNLIIQKQTLPLSPNQILLRGCSLRNTEYIVGAVIFTGHETK 240
Query: 213 VMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNS 272
VMMN+MN+PSKRSTLERKLDKLILALF L +MCLI AI S +FI++K+YYLGL G S
Sbjct: 241 VMMNAMNVPSKRSTLERKLDKLILALFGGLFLMCLIGAIASGVFINRKYYYLGL---GAS 297
Query: 273 VEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAE 332
VE+ QFNP RFLV L MFTLITLYS IIPISLYVSIE IKF QSTQ+INKDLHMYH E
Sbjct: 298 VEN-QFNPSNRFLVATLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLHMYHVE 356
Query: 333 SNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQ 392
+NTPA ARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGE+YGTGITEIE+G A+
Sbjct: 357 TNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIEKGGAE 416
Query: 393 QTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGD 452
+ G+K+ EV +S KAVHEKGFNFDD RL+ GAWRNE +PDACKEFFRCLAICHTVLPEGD
Sbjct: 417 RRGIKLEEVHKSSKAVHEKGFNFDDARLMLGAWRNEPDPDACKEFFRCLAICHTVLPEGD 476
Query: 453 ESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNV 512
ESPE++TYQAASPDEAALVTAAKNFGFFFYRRTPT IYVRESHVEKMGK+QDV YEILNV
Sbjct: 477 ESPEKVTYQAASPDEAALVTAAKNFGFFFYRRTPTTIYVRESHVEKMGKVQDVSYEILNV 536
Query: 513 LEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLR 572
LEFNSTRKRQSVVCRY DGRLVLYCKGADSVI+ERL +GN DLKK TREHLEQFGS+GLR
Sbjct: 537 LEFNSTRKRQSVVCRYPDGRLVLYCKGADSVIFERLGDGNGDLKKTTREHLEQFGSAGLR 596
Query: 573 TLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQE 632
TLCLAYRDLS DMYE WNEKFIQAKSSLRDRE+KLDEVAELIEKDL LIGCTAIEDKLQE
Sbjct: 597 TLCLAYRDLSTDMYEHWNEKFIQAKSSLRDREKKLDEVAELIEKDLVLIGCTAIEDKLQE 656
Query: 633 GVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERG 692
GVP+CIETL+RAGIKIWVLTGDKMETAINIAYACNLINN+MKQFII+SET+AIR+VE RG
Sbjct: 657 GVPSCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNDMKQFIISSETDAIREVENRG 716
Query: 693 DPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNL 752
D VEIARF++E V +L K ++EAQQ++H+ISG KLAL+IDGKCLMYALDP+LR +LLNL
Sbjct: 717 DQVEIARFIKESVTADLKKFLEEAQQHLHTISGPKLALVIDGKCLMYALDPNLRGMLLNL 776
Query: 753 SLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGM 812
SLNC+SVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAH+GVGISG EGM
Sbjct: 777 SLNCTSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHVGVGISGLEGM 836
Query: 813 QAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSG 872
QAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVV YFFYKNLTFTLTQFWFTFQTGFSG
Sbjct: 837 QAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSG 896
Query: 873 QRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIW 932
QRFYDDWFQSLYNVIFT++PVI++GLF+KDVS SLSKKYP+LY+EGI++ FF WRVV IW
Sbjct: 897 QRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSESLSKKYPELYKEGIRDSFFKWRVVGIW 956
Query: 933 AFFSVYQSLVLYNCVTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITR 992
AFFS YQSLV Y VT+SS++GQNSSGK+FG+WDVSTMAFTCVVVTVNLRLLM+CN+ITR
Sbjct: 957 AFFSFYQSLVFYYFVTSSSSSGQNSSGKMFGLWDVSTMAFTCVVVTVNLRLLMLCNSITR 1016
Query: 993 FHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLMSTFYFYFTLILVPVLALLG 1052
+HYI+V GSILAWF+F+F+Y+G+MTP DRQENVFFVI+VLMSTFYFY TL+LVP+ ALLG
Sbjct: 1017 WHYISVAGSILAWFIFIFIYSGVMTPYDRQENVFFVIYVLMSTFYFYLTLLLVPIAALLG 1076
Query: 1053 DFIFQGVQRWFSPYDYQIVQEMHRHDPEDRRMADLVEIGNQLTPEEARSYAIAQLPRELS 1112
DFIFQGVQRWF PYDYQI+QE++RH+P+ ++L++I N LTP+EARSYAI+QLPRE S
Sbjct: 1077 DFIFQGVQRWFFPYDYQIIQEIYRHEPDQSSRSELLDIRNDLTPDEARSYAISQLPREKS 1136
Query: 1113 KHTGFAFDSPGYESFFASQLGIYAPQKPWDVARRASMRSRPRIPKK 1158
KHTGFAFDSPGYESFFASQ G+YAPQK WDVARRASMRS R +K
Sbjct: 1137 KHTGFAFDSPGYESFFASQQGVYAPQKAWDVARRASMRSGARTAQK 1182
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356524099|ref|XP_003530670.1| PREDICTED: phospholipid-transporting ATPase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1966 bits (5092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 941/1157 (81%), Positives = 1052/1157 (90%), Gaps = 9/1157 (0%)
Query: 2 FLPFYQKGCLN--RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDW 59
F F KG RRVAN YFL ISILSTTP+SPV+P+TNV+PLSLVLLVSLIKEA+EDW
Sbjct: 71 FFTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSLVLLVSLIKEAFEDW 130
Query: 60 KRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVC 119
KRFQNDM+IN+ ++VL Q+W S+PW+KLQVGDIV VKQD FFPADLLFLASTNADGVC
Sbjct: 131 KRFQNDMSINNNTIDVLHDQKWESVPWKKLQVGDIVKVKQDAFFPADLLFLASTNADGVC 190
Query: 120 YIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQT 179
YIETANLDGETNLKIRKALE+TWDY+TPEKASEFKGE++CEQPNNSLYTFTGNLI QKQT
Sbjct: 191 YIETANLDGETNLKIRKALEKTWDYVTPEKASEFKGEIECEQPNNSLYTFTGNLITQKQT 250
Query: 180 LPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALF 239
LPL+PNQILLRGCSLRNTEYI+G VIF G ETKVMMN+MN+PSKRSTLERKLDKLIL LF
Sbjct: 251 LPLSPNQILLRGCSLRNTEYIVGVVIFTGQETKVMMNTMNVPSKRSTLERKLDKLILTLF 310
Query: 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDD--QFNPDKRFLVFVLNMFTLITL 297
ATL VMC I A+GSAIF++KK++YL L +S E+ QFNP RFLVF+L MFTLITL
Sbjct: 311 ATLFVMCFIGAVGSAIFVNKKYFYLHL----DSSEEGSAQFNPKNRFLVFLLTMFTLITL 366
Query: 298 YSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSD 357
YS IIPISLYVSIE IKF QSTQ+INKDL MYH E+NTPA ARTSNLNEELGQVEYIFSD
Sbjct: 367 YSTIIPISLYVSIEMIKFIQSTQFINKDLCMYHNETNTPALARTSNLNEELGQVEYIFSD 426
Query: 358 KTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDD 417
KTGTLTRNLMEFFKCSIGGE+YG G+TEIERG+A++ GMKI E RS AVHE+GFNFDD
Sbjct: 427 KTGTLTRNLMEFFKCSIGGEVYGNGVTEIERGLAERNGMKIEE-NRSPNAVHERGFNFDD 485
Query: 418 PRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNF 477
R++RGAWRNE NPD CKEFFRCLAICHTVLPEGDESPE+I YQAASPDEAALV AAK+F
Sbjct: 486 ARIMRGAWRNEPNPDVCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKHF 545
Query: 478 GFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYC 537
GFFFYRRTPTM+YVRESHVEKMGK+QDV YEILNVLEFNSTRKRQSVVCRY DGRLVLYC
Sbjct: 546 GFFFYRRTPTMVYVRESHVEKMGKVQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYC 605
Query: 538 KGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAK 597
KGAD+V+YERLA+GN ++KKVTREHLEQFGS+GLRTLCLAY++L PD+YE WNEKFIQAK
Sbjct: 606 KGADNVVYERLADGNNNIKKVTREHLEQFGSAGLRTLCLAYKELHPDVYESWNEKFIQAK 665
Query: 598 SSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKME 657
SSL DRE+KLDEVAELIE DL LIG TAIEDKLQEGVPACIETL RAGIKIWVLTGDK+E
Sbjct: 666 SSLNDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIE 725
Query: 658 TAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQ 717
TAINIAYACNLINNEMKQF+I+SET+ IR+VE+RGD VEIARF++E VKREL KC++EAQ
Sbjct: 726 TAINIAYACNLINNEMKQFVISSETDEIREVEDRGDQVEIARFIKEVVKRELKKCLEEAQ 785
Query: 718 QYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVK 777
S+ G KLAL+IDGKCLMYALDPSLRV+LLNLSLNC +VVCCRVSPLQKAQVTS+VK
Sbjct: 786 SSFQSLRGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSMVK 845
Query: 778 KGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGR 837
KGA+KITLSIGDGANDVSMIQAAH+GVGISG EGMQAVMASDFAIAQFR+L DLLLVHGR
Sbjct: 846 KGAQKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLADLLLVHGR 905
Query: 838 WSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLG 897
WSYLRICKVV+YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFT++PVI++G
Sbjct: 906 WSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVG 965
Query: 898 LFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNS 957
LF+KDVS+SLSKKYPQLY EGI+NVFF W+VVAIWAFFSVYQSL+ + V++++ + +NS
Sbjct: 966 LFDKDVSSSLSKKYPQLYMEGIRNVFFKWKVVAIWAFFSVYQSLIFFYFVSSTNLSAKNS 1025
Query: 958 SGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMT 1017
+GKIFG+WDVSTMAFTCVV+TVNLRLLM+CN+ITR+HYI+VGGSILAWFLF+F+Y+GI T
Sbjct: 1026 AGKIFGLWDVSTMAFTCVVITVNLRLLMICNSITRWHYISVGGSILAWFLFIFIYSGIST 1085
Query: 1018 PNDRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHRH 1077
P DRQEN++FVI+VLMSTFYFY L LVPV AL DF++QGVQRWF PYDYQI+QEMHR
Sbjct: 1086 PYDRQENIYFVIYVLMSTFYFYVMLFLVPVAALFCDFVYQGVQRWFFPYDYQIIQEMHRD 1145
Query: 1078 DPEDRRMADLVEIGNQLTPEEARSYAIAQLPRELSKHTGFAFDSPGYESFFASQLGIYAP 1137
+ + A L+EIGNQLTP+EARSYAI+QLPRELSKHTGFAFDSPGYESFFA+QLG+YAP
Sbjct: 1146 EVDSTGRAQLLEIGNQLTPDEARSYAISQLPRELSKHTGFAFDSPGYESFFAAQLGVYAP 1205
Query: 1138 QKPWDVARRASMRSRPR 1154
K WDVARRASMRSR +
Sbjct: 1206 PKAWDVARRASMRSRSK 1222
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15218927|ref|NP_176191.1| phospholipid-transporting ATPase 3 [Arabidopsis thaliana] gi|30316321|sp|Q9XIE6.2|ALA3_ARATH RecName: Full=Phospholipid-transporting ATPase 3; Short=AtALA3; AltName: Full=Aminophospholipid ATPase 3; AltName: Full=Aminophospholipid flippase 3; AltName: Full=Protein IRREGULAR TRICHOME BRANCH 2 gi|20147219|gb|AAM10325.1| At1g59820/F23H11_14 [Arabidopsis thaliana] gi|332195500|gb|AEE33621.1| phospholipid-transporting ATPase 3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1962 bits (5082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 917/1159 (79%), Positives = 1047/1159 (90%), Gaps = 13/1159 (1%)
Query: 2 FLPFYQKGCLN--RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDW 59
FLP KG RR+AN YFL IS LS TP+SPV+P+TNV PLS+VLLVSLIKEA+EDW
Sbjct: 66 FLP---KGLFEQFRRIANIYFLGISCLSMTPISPVSPITNVAPLSMVLLVSLIKEAFEDW 122
Query: 60 KRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVC 119
KRFQNDM+IN++ VE+LQ Q+WVSIPWRKLQVGDIV +K+DGFFPAD+LF++STN+DG+C
Sbjct: 123 KRFQNDMSINNSTVEILQDQQWVSIPWRKLQVGDIVKIKKDGFFPADILFMSSTNSDGIC 182
Query: 120 YIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQT 179
Y+ETANLDGETNLKIRKALERTWDYL PEKA EFKGE+QCEQPNNSLYTFTGNL++QKQT
Sbjct: 183 YVETANLDGETNLKIRKALERTWDYLVPEKAYEFKGEIQCEQPNNSLYTFTGNLVVQKQT 242
Query: 180 LPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALF 239
LPL+P+Q+LLRGCSLRNTEYI+GAV+F GHETKVMMN+MN PSKRSTLE+KLDKLI+ +F
Sbjct: 243 LPLSPDQLLLRGCSLRNTEYIVGAVVFTGHETKVMMNAMNAPSKRSTLEKKLDKLIITIF 302
Query: 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYS 299
L MCLI AIG +I D++ YLGLHN + ++ FTL+TL+S
Sbjct: 303 CVLVTMCLIGAIGCSIVTDREDKYLGLHN-------SDWEYRNGLMIGFFTFFTLVTLFS 355
Query: 300 PIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKT 359
IIPISLYVSIE IKF QSTQ+IN+DL+MYHAE+NTPASARTSNLNEELGQVEYIFSDKT
Sbjct: 356 SIIPISLYVSIEMIKFIQSTQFINRDLNMYHAETNTPASARTSNLNEELGQVEYIFSDKT 415
Query: 360 GTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPR 419
GTLTRNLMEFFKCSIGG YG G+TEIE+G+AQ+ G+K+ E +RS A+ EKGFNFDDPR
Sbjct: 416 GTLTRNLMEFFKCSIGGVSYGCGVTEIEKGIAQRHGLKVQEEQRSTGAIREKGFNFDDPR 475
Query: 420 LLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGF 479
L+RGAWRNE NPD CKE FRCLAICHTVLPEGDESPE+I YQAASPDEAALVTAAKNFGF
Sbjct: 476 LMRGAWRNEPNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGF 535
Query: 480 FFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKG 539
FFYRRTPTM+YVRESHVEKMGK+QDV YEILNVLEFNSTRKRQSVVCR+ DGRLVLYCKG
Sbjct: 536 FFYRRTPTMVYVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKG 595
Query: 540 ADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSS 599
AD+VI+ERLANG +D++KVTREHLE FGSSGLRTLCLAY+DL+P+ Y+ WNEKFIQAKS+
Sbjct: 596 ADNVIFERLANGMDDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSA 655
Query: 600 LRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETA 659
LRDRE+KLDEVAELIEKDL LIG TAIEDKLQEGVP CIETL+RAGIKIWVLTGDKMETA
Sbjct: 656 LRDREKKLDEVAELIEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETA 715
Query: 660 INIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQY 719
INIAYACNLINNEMKQF+I+SET+AIR+ EERGD VEIAR ++EEVKREL K ++EAQ
Sbjct: 716 INIAYACNLINNEMKQFVISSETDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHS 775
Query: 720 IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG 779
+H+++G KL+L+IDGKCLMYALDPSLRV+LL+LSLNC+SVVCCRVSPLQKAQVTSLV+KG
Sbjct: 776 LHTVAGPKLSLVIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKG 835
Query: 780 ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWS 839
A+KITLSIGDGANDVSMIQAAH+G+GISG EGMQAVMASDFAIAQFRFLTDLLLVHGRWS
Sbjct: 836 AQKITLSIGDGANDVSMIQAAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWS 895
Query: 840 YLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLF 899
YLRICKVV+YFFYKNLTFTLTQFWFTF+TGFSGQRFYDDWFQSL+NV+FT++PVI+LGLF
Sbjct: 896 YLRICKVVMYFFYKNLTFTLTQFWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLF 955
Query: 900 EKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSG 959
EKDVSASLSK+YP+LY+EGI+N FF WRVVA+WA +VYQSLV Y VTTSS NSSG
Sbjct: 956 EKDVSASLSKRYPELYREGIRNSFFKWRVVAVWATSAVYQSLVCYLFVTTSSFGAVNSSG 1015
Query: 960 KIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1019
K+FG+WDVSTM FTC+V+ VN+R+L+M N+ITR+HYITVGGSILAW +F F+Y GIMTP+
Sbjct: 1016 KVFGLWDVSTMVFTCLVIAVNVRILLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPH 1075
Query: 1020 DRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHRHDP 1079
DR ENV+FVI+VLMSTFYFYFTL+LVP+++LLGDFIFQGV+RWF PYDYQIVQE+HRH+
Sbjct: 1076 DRNENVYFVIYVLMSTFYFYFTLLLVPIVSLLGDFIFQGVERWFFPYDYQIVQEIHRHE- 1134
Query: 1080 EDRRMADLVEIGNQLTPEEARSYAIAQLPRELSKHTGFAFDSPGYESFFASQLGIYAPQK 1139
D AD +E+ N+LTP+EARSYAI+QLPRELSKHTGFAFDSPGYESFFASQLGIYAPQK
Sbjct: 1135 SDASKADQLEVENELTPQEARSYAISQLPRELSKHTGFAFDSPGYESFFASQLGIYAPQK 1194
Query: 1140 PWDVARRASMRSRPRIPKK 1158
WDVARRASMRSRP++PKK
Sbjct: 1195 AWDVARRASMRSRPKVPKK 1213
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297840577|ref|XP_002888170.1| hypothetical protein ARALYDRAFT_475328 [Arabidopsis lyrata subsp. lyrata] gi|297334011|gb|EFH64429.1| hypothetical protein ARALYDRAFT_475328 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1960 bits (5078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 917/1159 (79%), Positives = 1044/1159 (90%), Gaps = 13/1159 (1%)
Query: 2 FLPFYQKGCLN--RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDW 59
FLP KG RR+AN YFL IS LS TP+SPV+P+TNV PLS+VLLVSLIKEA+EDW
Sbjct: 68 FLP---KGLFEQFRRIANIYFLGISCLSMTPISPVSPITNVAPLSMVLLVSLIKEAFEDW 124
Query: 60 KRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVC 119
KRFQNDM+IN++ VE+LQ Q+WVSIPWRKLQVGDIV +K+DGFFPAD+LFL+STNADG+C
Sbjct: 125 KRFQNDMSINNSTVEILQDQQWVSIPWRKLQVGDIVKIKKDGFFPADILFLSSTNADGIC 184
Query: 120 YIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQT 179
Y+ETANLDGETNLKIRKALERTWDYL PEKA EFKGE+QCEQPNNSLYTFTGNL++QKQT
Sbjct: 185 YVETANLDGETNLKIRKALERTWDYLVPEKAYEFKGEIQCEQPNNSLYTFTGNLVVQKQT 244
Query: 180 LPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALF 239
LPL+P+Q+LLRGCSLRNTEYI+GAV+F GHETKVMMN+MN PSKRSTLE+KLDKLI+ +F
Sbjct: 245 LPLSPDQLLLRGCSLRNTEYIVGAVVFTGHETKVMMNAMNAPSKRSTLEKKLDKLIITIF 304
Query: 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYS 299
L MCLI AIG +I D++ YLGLH + ++ FTL+TL+S
Sbjct: 305 CVLVTMCLIGAIGCSIVTDREDKYLGLHK-------SDWEYRNGLMIGFFTFFTLVTLFS 357
Query: 300 PIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKT 359
IIPISLYVSIE IKF QSTQ+IN+DL MYHAE+NTPASARTSNLNEELGQVEYIFSDKT
Sbjct: 358 SIIPISLYVSIEMIKFIQSTQFINRDLSMYHAETNTPASARTSNLNEELGQVEYIFSDKT 417
Query: 360 GTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPR 419
GTLTRNLMEFFKCSIGG YG G+TEIERG+AQ+ G+K+ E +RS A+ EKGFNFDDPR
Sbjct: 418 GTLTRNLMEFFKCSIGGISYGCGVTEIERGIAQRHGLKVQEEQRSTGAIREKGFNFDDPR 477
Query: 420 LLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGF 479
L+RGAWRNE NPD CKE FRCLAICHTVLPEGDESPE+I YQAASPDEAALVTAAKNFGF
Sbjct: 478 LMRGAWRNEPNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGF 537
Query: 480 FFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKG 539
FFYRRTPTM+YVRE+HVEKMGK+QDV YEILNVLEFNSTRKRQSVVCR+ DGRLVLYCKG
Sbjct: 538 FFYRRTPTMVYVREAHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKG 597
Query: 540 ADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSS 599
AD+VI+ERLANG +D++KVTREHLE FGSSGLRTLCLAY+DL+P+ Y+ WNEKFIQAKS+
Sbjct: 598 ADNVIFERLANGMDDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSA 657
Query: 600 LRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETA 659
LRDRE+KLDEVAELIEKDL LIG TAIEDKLQEGVP CIETL+RAGIKIWVLTGDKMETA
Sbjct: 658 LRDREKKLDEVAELIEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETA 717
Query: 660 INIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQY 719
INIAYACNLINNEMKQF+I+SET+AIR+ EERGD VEIAR ++EEVKREL K ++EAQ
Sbjct: 718 INIAYACNLINNEMKQFVISSETDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHS 777
Query: 720 IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG 779
+H+++G KL+L+IDGKCLMYALDPSLRV+LL+LSLNC+SVVCCRVSPLQKAQVTSLV+KG
Sbjct: 778 LHTVAGPKLSLVIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKG 837
Query: 780 ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWS 839
A+KITLSIGDGANDVSMIQAAH+G+GISG EGMQAVMASDFAIAQFRFLTDLLLVHGRWS
Sbjct: 838 AQKITLSIGDGANDVSMIQAAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWS 897
Query: 840 YLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLF 899
YLRICKVV+YFFYKNLTFTLTQFWFTF+TGFSGQRFYDDWFQSL+NV+FT++PVI+LGLF
Sbjct: 898 YLRICKVVMYFFYKNLTFTLTQFWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLF 957
Query: 900 EKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSG 959
EKDVSASLSK+YP+LY+EGI+N FF WRVVA+WA +VYQSLV Y VTTSS NSSG
Sbjct: 958 EKDVSASLSKRYPELYREGIRNSFFKWRVVAVWASSAVYQSLVCYLFVTTSSFGAVNSSG 1017
Query: 960 KIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1019
K+FG+WDVSTM FTC+V+ VN+R+L+M N+ITR+HYITVGGSILAW +F F+Y GIMTP+
Sbjct: 1018 KVFGLWDVSTMVFTCLVIAVNVRILLMSNSITRWHYITVGGSILAWLVFAFIYCGIMTPH 1077
Query: 1020 DRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHRHDP 1079
DR ENV+FVI+VLMSTFYFYF L+LVP+++LLGDFIFQGV+RWF PYDYQIVQE+HRH+
Sbjct: 1078 DRNENVYFVIYVLMSTFYFYFALLLVPIVSLLGDFIFQGVERWFFPYDYQIVQEIHRHE- 1136
Query: 1080 EDRRMADLVEIGNQLTPEEARSYAIAQLPRELSKHTGFAFDSPGYESFFASQLGIYAPQK 1139
D AD +E+ N+LTP+EARSYAI+QLPRELSKHTGFAFDSPGYESFFASQLGIYAPQK
Sbjct: 1137 SDASKADQLEVENELTPQEARSYAISQLPRELSKHTGFAFDSPGYESFFASQLGIYAPQK 1196
Query: 1140 PWDVARRASMRSRPRIPKK 1158
WDVARRASMRSRP++PKK
Sbjct: 1197 AWDVARRASMRSRPKVPKK 1215
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449478491|ref|XP_004155332.1| PREDICTED: LOW QUALITY PROTEIN: phospholipid-transporting ATPase 3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1882 bits (4876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 890/1064 (83%), Positives = 984/1064 (92%), Gaps = 4/1064 (0%)
Query: 95 VMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFK 154
+ V+QDGFFPADLLFLASTN DGV YIETANLDGETNLKIRKALE+TWDYLTPEKASEFK
Sbjct: 1 MQVRQDGFFPADLLFLASTNPDGVSYIETANLDGETNLKIRKALEKTWDYLTPEKASEFK 60
Query: 155 GEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVM 214
GEVQCEQPNNSLYTFTGN+I+QKQTLPL+PNQ+LLRGCSLRNTEYI+GAVIF GHETKVM
Sbjct: 61 GEVQCEQPNNSLYTFTGNVIIQKQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVM 120
Query: 215 MNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVE 274
MN+MN+PSKRSTLE+KLDKLIL LFATL VMCLI AIGS +F+++++YYL L G
Sbjct: 121 MNAMNVPSKRSTLEKKLDKLILTLFATLFVMCLIGAIGSGVFVNEEYYYLALDKGG---- 176
Query: 275 DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESN 334
++QFNP RFLV +L MFTLITLYS IIPISLYVSIE IKF QSTQYINKDL+M+HA+SN
Sbjct: 177 ENQFNPRNRFLVIILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMFHADSN 236
Query: 335 TPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQT 394
TPA ARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGE+YGTGITEIERG+A+Q
Sbjct: 237 TPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIERGIAEQN 296
Query: 395 GMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDES 454
G+K+ E +S AV EKGFNFDDPRL+RGAWRNE N D CKEFFRCLAICHTVLPEGDES
Sbjct: 297 GLKVEEAHKSANAVQEKGFNFDDPRLMRGAWRNEPNSDLCKEFFRCLAICHTVLPEGDES 356
Query: 455 PERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLE 514
PE+ITYQAASPDEAALV AAKNFGFFFYRRTPT IYVRESHVEKMGK+QDV YEILNVLE
Sbjct: 357 PEKITYQAASPDEAALVAAAKNFGFFFYRRTPTTIYVRESHVEKMGKIQDVSYEILNVLE 416
Query: 515 FNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTL 574
FNS RKRQSVVCRY+DGRL+LYCKGAD+V+YERLA GN+DLK +TREHLE+FGSSGLRTL
Sbjct: 417 FNSVRKRQSVVCRYSDGRLILYCKGADTVVYERLAGGNDDLKNITREHLEKFGSSGLRTL 476
Query: 575 CLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGV 634
CLAYRDL PD+YE WNEKFIQAKSSLRDRE+KLDEVAELIEKDL LIGCTAIEDKLQEGV
Sbjct: 477 CLAYRDLHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIEKDLILIGCTAIEDKLQEGV 536
Query: 635 PACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDP 694
P CI+TL+RAGIKIWVLTGDKMETAINIAYACNLINNEMKQFII+SET+ IR+VE RGD
Sbjct: 537 PNCIQTLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIISSETDEIREVENRGDQ 596
Query: 695 VEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSL 754
VE+ARF+REEVKR L +C++EAQ +HSI KLAL+IDGKCLMYALDPSLRV LL LSL
Sbjct: 597 VELARFIREEVKRXLKRCLEEAQLCLHSIPPPKLALVIDGKCLMYALDPSLRVTLLKLSL 656
Query: 755 NCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQA 814
NCSSVVCCRVSPLQKAQVTSLVKKGA+KITLSIGDGANDVSMIQAAH+G+GISGQEGMQA
Sbjct: 657 NCSSVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQAAHVGIGISGQEGMQA 716
Query: 815 VMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQR 874
VMASDFAIAQFRFLTDLLLVHGRWSYLRICKVV YFFYKNLTFTLTQFWFTFQTGFSGQR
Sbjct: 717 VMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQR 776
Query: 875 FYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAF 934
FYDDWFQSLYNVIFT++PVI++GLF+KDVSA+LSKKYP+LY+EGI+NVFF WRVV WAF
Sbjct: 777 FYDDWFQSLYNVIFTALPVIIVGLFDKDVSAALSKKYPELYREGIRNVFFKWRVVTTWAF 836
Query: 935 FSVYQSLVLYNCVTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFH 994
FSVYQSLV Y VT SS++ Q+SSGK+FG+WD+STM FTC+VVTVNLRLLM+CN+ITR+H
Sbjct: 837 FSVYQSLVFYYFVTASSSSSQSSSGKVFGLWDISTMTFTCIVVTVNLRLLMICNSITRWH 896
Query: 995 YITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDF 1054
YITVGGSILAWFLF+FLY+GIMTP+DRQENV+FVI+VLMST YFY +ILVPV+ALL DF
Sbjct: 897 YITVGGSILAWFLFIFLYSGIMTPHDRQENVYFVIYVLMSTLYFYVAVILVPVVALLCDF 956
Query: 1055 IFQGVQRWFSPYDYQIVQEMHRHDPEDRRMADLVEIGNQLTPEEARSYAIAQLPRELSKH 1114
+QG+QRWF PYDYQIVQE+HRH+PE R A L+EI N LTPEEARSYA++QLPRELSKH
Sbjct: 957 AYQGLQRWFFPYDYQIVQEIHRHEPEGRGTAGLLEIQNHLTPEEARSYAMSQLPRELSKH 1016
Query: 1115 TGFAFDSPGYESFFASQLGIYAPQKPWDVARRASMRSRPRIPKK 1158
TGFAFDSPGYESFFA+QLGIYAPQK WDVARRAS++SRP+I +K
Sbjct: 1017 TGFAFDSPGYESFFAAQLGIYAPQKAWDVARRASVKSRPKIREK 1060
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1159 | ||||||
| TAIR|locus:2025961 | 1213 | ALA3 "aminophospholipid ATPase | 0.988 | 0.944 | 0.740 | 0.0 | |
| TAIR|locus:2102345 | 1202 | AT3G25610 [Arabidopsis thalian | 0.920 | 0.887 | 0.442 | 1.7e-233 | |
| TAIR|locus:2026900 | 1200 | AT1G68710 [Arabidopsis thalian | 0.915 | 0.884 | 0.438 | 4.2e-230 | |
| TAIR|locus:2031860 | 1203 | ACA.l "autoinhibited Ca2+/ATPa | 0.912 | 0.879 | 0.445 | 1.4e-229 | |
| TAIR|locus:2007858 | 1216 | AT1G17500 [Arabidopsis thalian | 0.917 | 0.874 | 0.433 | 3e-227 | |
| TAIR|locus:2030180 | 1228 | AT1G72700 [Arabidopsis thalian | 0.568 | 0.536 | 0.438 | 4.4e-226 | |
| TAIR|locus:2088217 | 1243 | AT3G13900 [Arabidopsis thalian | 0.568 | 0.530 | 0.433 | 3.9e-225 | |
| TAIR|locus:2020038 | 1240 | AT1G54280 [Arabidopsis thalian | 0.570 | 0.533 | 0.436 | 1.5e-223 | |
| UNIPROTKB|L7N093 | 1085 | LOC486036 "Uncharacterized pro | 0.301 | 0.322 | 0.472 | 6.4e-197 | |
| POMBASE|SPBC887.12 | 1258 | SPBC887.12 "P-type ATPase (pre | 0.310 | 0.286 | 0.416 | 1.6e-192 |
| TAIR|locus:2025961 ALA3 "aminophospholipid ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4530 (1599.7 bits), Expect = 0., P = 0.
Identities = 856/1156 (74%), Positives = 978/1156 (84%)
Query: 5 FYQKGCLN--RRVANCYFLMISILXXXXXXXXXXXXXXXXXXXXXXXXXIKEAWEDWKRF 62
F KG RR+AN YFL IS L IKEA+EDWKRF
Sbjct: 66 FLPKGLFEQFRRIANIYFLGISCLSMTPISPVSPITNVAPLSMVLLVSLIKEAFEDWKRF 125
Query: 63 QNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIE 122
QNDM+IN++ VE+LQ Q+WVSIPWRKLQVGDIV +K+DGFFPAD+LF++STN+DG+CY+E
Sbjct: 126 QNDMSINNSTVEILQDQQWVSIPWRKLQVGDIVKIKKDGFFPADILFMSSTNSDGICYVE 185
Query: 123 TANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPL 182
TANLDGETNLKIRKALERTWDYL PEKA EFKGE+QCEQPNNSLYTFTGNL++QKQTLPL
Sbjct: 186 TANLDGETNLKIRKALERTWDYLVPEKAYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPL 245
Query: 183 NPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATL 242
+P+Q+LLRGCSLRNTEYI+GAV+F GHETKVMMN+MN PSKRSTLE+KLDKLI+ +F L
Sbjct: 246 SPDQLLLRGCSLRNTEYIVGAVVFTGHETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVL 305
Query: 243 TVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPII 302
MCLI AIG +I D++ YLGLHN D ++ ++ FTL+TL+S II
Sbjct: 306 VTMCLIGAIGCSIVTDREDKYLGLHN-----SDWEYR--NGLMIGFFTFFTLVTLFSSII 358
Query: 303 PISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTL 362
PISLYVSIE IKF QSTQ+IN+DL+MYHAE+NTPASARTSNLNEELGQVEYIFSDKTGTL
Sbjct: 359 PISLYVSIEMIKFIQSTQFINRDLNMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTL 418
Query: 363 TRNLMEFFKCSXXXXXXXXXXXXXXRGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLR 422
TRNLMEFFKCS +G+AQ+ G+K+ E +RS A+ EKGFNFDDPRL+R
Sbjct: 419 TRNLMEFFKCSIGGVSYGCGVTEIEKGIAQRHGLKVQEEQRSTGAIREKGFNFDDPRLMR 478
Query: 423 GAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFY 482
GAWRNE NPD CKE FRCLAICHTVLPEGDESPE+I YQAASPDEAALVTAAKNFGFFFY
Sbjct: 479 GAWRNEPNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFY 538
Query: 483 RRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADS 542
RRTPTM+YVRESHVEKMGK+QDV YEILNVLEFNSTRKRQSVVCR+ DGRLVLYCKGAD+
Sbjct: 539 RRTPTMVYVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADN 598
Query: 543 VIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRD 602
VI+ERLANG +D++KVTREHLE FGSSGLRTLCLAY+DL+P+ Y+ WNEKFIQAKS+LRD
Sbjct: 599 VIFERLANGMDDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALRD 658
Query: 603 REQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINI 662
RE+KLDEVAELIEKDL LIG TAIEDKLQEGVP CIETL+RAGIKIWVLTGDKMETAINI
Sbjct: 659 REKKLDEVAELIEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINI 718
Query: 663 AYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHS 722
AYACNLINNEMKQF+I+SET+AIR+ EERGD VEIAR ++EEVKREL K ++EAQ +H+
Sbjct: 719 AYACNLINNEMKQFVISSETDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHT 778
Query: 723 ISGEKLALIIDGKCLMYALDPSLRXXXXXXXXXXXXXXXXXXXPLQKAQVTSLVKKGARK 782
++G KL+L+IDGKCLMYALDPSLR PLQKAQVTSLV+KGA+K
Sbjct: 779 VAGPKLSLVIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQK 838
Query: 783 ITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLR 842
ITLSIGDGANDVSMIQAAH+G+GISG EGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLR
Sbjct: 839 ITLSIGDGANDVSMIQAAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLR 898
Query: 843 ICKVVLYFFYKNXXXXXXXXXXXXXXXXSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKD 902
ICKVV+YFFYKN SGQRFYDDWFQSL+NV+FT++PVI+LGLFEKD
Sbjct: 899 ICKVVMYFFYKNLTFTLTQFWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKD 958
Query: 903 VSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSGKIF 962
VSASLSK+YP+LY+EGI+N FF WRVVA+WA +VYQSLV Y VTTSS NSSGK+F
Sbjct: 959 VSASLSKRYPELYREGIRNSFFKWRVVAVWATSAVYQSLVCYLFVTTSSFGAVNSSGKVF 1018
Query: 963 GIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDRQ 1022
G+WDVSTM FTC+V+ VN+R+L+M N+ITR+HYITVGGSILAW +F F+Y GIMTP+DR
Sbjct: 1019 GLWDVSTMVFTCLVIAVNVRILLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPHDRN 1078
Query: 1023 ENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHRHDPEDR 1082
ENV+FVI+VLMSTFYFYFTL+LVP+++LLGDFIFQGV+RWF PYDYQIVQE+HRH+ D
Sbjct: 1079 ENVYFVIYVLMSTFYFYFTLLLVPIVSLLGDFIFQGVERWFFPYDYQIVQEIHRHE-SDA 1137
Query: 1083 RMADLVEIGNQLTPEEARSYAIAQLPRELSKHTGFAFDSPGYESFFASQLGIYAPQKPWD 1142
AD +E+ N+LTP+EARSYAI+QLPRELSKHTGFAFDSPGYESFFASQLGIYAPQK WD
Sbjct: 1138 SKADQLEVENELTPQEARSYAISQLPRELSKHTGFAFDSPGYESFFASQLGIYAPQKAWD 1197
Query: 1143 VARRASMRSRPRIPKK 1158
VARRASMRSRP++PKK
Sbjct: 1198 VARRASMRSRPKVPKK 1213
|
|
| TAIR|locus:2102345 AT3G25610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2252 (797.8 bits), Expect = 1.7e-233, P = 1.7e-233
Identities = 486/1098 (44%), Positives = 658/1098 (59%)
Query: 5 FYQKGCLN--RRVANCYFLMISILXXXXXXXXXXXXXXXXXXXXXXXXXIKEAWEDWKRF 62
F+ K RRVAN YFL+ IL +KE EDW+R
Sbjct: 72 FFPKSLFEQFRRVANFYFLVTGILSLTDLSPYGAVSALLPLALVISATMVKEGIEDWRRK 131
Query: 63 QNDMTINSTPVEVLQGQR-WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYI 121
Q D+ +N+ V+V G + WR L+VGDIV V++D FFPADLL L+S+ D VCY+
Sbjct: 132 QQDIEVNNRKVKVHDGNGIFRQEEWRNLRVGDIVRVEKDEFFPADLLLLSSSYEDSVCYV 191
Query: 122 ETANLDGETNLKIRKALERTWDYLTPEKA-SEFKGEVQCEQPNNSLYTFTGNLIMQKQTL 180
ET NLDGETNLK+++ LE T L + +F+G V+CE PN +LY F G L ++++
Sbjct: 192 ETMNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEERF 251
Query: 181 PLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFA 240
PL+ QILLR LRNTEY+ GAV+F GH+TKV+ NS + PSKRS +ER +DK+I +F
Sbjct: 252 PLSIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMFG 311
Query: 241 TLTVMCLICAIGSAIF-IDKKHYYL--GLHNMGNSVEDDQ---FNPDKRFLVFVLNMFTL 294
+ +M + GS IF ++ + + G DD F+P++ + + + FT
Sbjct: 312 LVFLMSFV---GSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIYHFFTA 368
Query: 295 ITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYI 354
LYS IPISLYVSIE +K QS +IN+D+HMY+ E++ PA ARTSNLNEELG V+ I
Sbjct: 369 TMLYSYFIPISLYVSIEIVKVLQSI-FINRDIHMYYEETDKPAQARTSNLNEELGMVDTI 427
Query: 355 FSDKTGTLTRNLMEFFKCSXXXXXXXXXXXXXXRGVAQQTGMKIPEVERSVKAVHE---- 410
SDKTGTLT N MEF KCS R +A ++G P V + V +
Sbjct: 428 LSDKTGTLTCNSMEFIKCSIAGKAYGRGITEVERAMAVRSGGS-PLVNEDLDVVVDQSGP 486
Query: 411 --KGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEA 468
KGFNF+D R++ G W + ++FFR LA+CHT +PE DE ++Y+A SPDEA
Sbjct: 487 KVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIPETDEESGNVSYEAESPDEA 546
Query: 469 ALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRY 528
A V AA+ FGF F+ RT I RE + K++ V Y +LNVLEFNSTRKR SV+ R
Sbjct: 547 AFVVAAREFGFEFFNRTQNGISFRELDLVSGEKVERV-YRLLNVLEFNSTRKRMSVIVRD 605
Query: 529 ADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYER 588
DG+L+L KGAD+V++ERLA + T+EH+ Q+ +GLRTL LAYR++ + Y
Sbjct: 606 DDGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAGLRTLVLAYREVDENEYIE 665
Query: 589 WNEKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIK 647
+N+ F +AK+S+ DRE +DE+ + +E+DL L+G TA+EDKLQ GVP CI+ LA+AGIK
Sbjct: 666 FNKSFNEAKASVSEDREALIDEITDKMERDLILLGATAVEDKLQNGVPECIDKLAQAGIK 725
Query: 648 IWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707
IWVLTGDKMETAINI +A +L+ EMKQ II ET I+ +E+ G EI RE V
Sbjct: 726 IWVLTGDKMETAINIGFASSLLRQEMKQIIINLETPQIKSLEKSGGKDEIELASRESVVM 785
Query: 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRXXXXXXXXXXXXXXXXXXXPL 767
+L + +A S E ALIIDGK L YAL+ ++ P
Sbjct: 786 QLQE--GKALLAASGASSEAFALIIDGKSLTYALEDEIKKMFLDLATSCASVICCRSSPK 843
Query: 768 QKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 827
QKA VT LVK G K TL+IGDGANDV M+Q A IGVGISG EGMQAVM+SD AIAQFR+
Sbjct: 844 QKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRY 903
Query: 828 LTDLLLVHGRWSYLRICKVVLYFFYKNXXXXXXXXXXXXXXXXSGQRFYDDWFQSLYNVI 887
L LLLVHG W Y RI ++ YFFYKN SGQ Y+DWF SL+NV
Sbjct: 904 LERLLLVHGHWCYSRIASMICYFFYKNITFGVTVFLYEAYTSFSGQPAYNDWFLSLFNVF 963
Query: 888 FTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSL-VLYNC 946
F+S+PVI LG+F++DVSA K+P LYQEG++N+ F+W+ + W F +L + + C
Sbjct: 964 FSSLPVIALGVFDQDVSARFCYKFPLLYQEGVQNILFSWKRIIGWMFNGFISALAIFFLC 1023
Query: 947 VTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWF 1006
+ + GK G + +TCVV VNL++ + + T +I + GSI W+
Sbjct: 1024 KESLKHQLFDPDGKTAGREILGGTMYTCVVWVVNLQMALSISYFTWVQHIVIWGSIAFWY 1083
Query: 1007 LFVFLYTGIMTPNDRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPY 1066
+F+ +Y G MTP+ + + L ++ T + V + AL+ F+++ VQ F P
Sbjct: 1084 IFLMIY-GAMTPSFSTDAYMVFLEALAPAPSYWLTTLFVMIFALIPYFVYKSVQMRFFPK 1142
Query: 1067 DYQIVQ----EMHRHDPE 1080
+Q++Q E H +DPE
Sbjct: 1143 YHQMIQWIRYEGHSNDPE 1160
|
|
| TAIR|locus:2026900 AT1G68710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2220 (786.5 bits), Expect = 4.2e-230, P = 4.2e-230
Identities = 478/1089 (43%), Positives = 658/1089 (60%)
Query: 13 RRVANCYFLMISILXXXXXXXXXXXXXXXXXXXXXXXXXIKEAWEDWKRFQNDMTINSTP 72
RRVAN YFL+ +L +KE EDW+R + D +N+
Sbjct: 84 RRVANFYFLVTGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGVEDWRRQKQDNEVNNRK 143
Query: 73 VEVLQGQ-RWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETN 131
V+V +G + + W+ L +GDIV V+++ FFPADL+ L+S+ D +CY+ET NLDGETN
Sbjct: 144 VKVHRGDGSFDAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYEDAICYVETMNLDGETN 203
Query: 132 LKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRG 191
LK+++ LE T F+ V+CE PN +LY+F G + ++ PL+P Q+LLR
Sbjct: 204 LKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYPLSPQQLLLRD 263
Query: 192 CSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAI 251
LRNT++I GAVIF GH+TKV+ NS + PSKRS +E+K+DK+I +F + M I ++
Sbjct: 264 SKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFMVITMAFIGSV 323
Query: 252 --GSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVS 309
G D K + + F+P + + + + T + LYS IPISLYVS
Sbjct: 324 IFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYSYFIPISLYVS 383
Query: 310 IETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEF 369
IE +K QS +IN+D+HMY+ E++ PA ARTSNLNEELGQV+ I SDKTGTLT N MEF
Sbjct: 384 IEIVKVLQSI-FINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEF 442
Query: 370 FKCSXXXXXXXXXXXXXXRGVAQQTGMKIP--------EVERSVKAVHE----KGFNFDD 417
KCS + ++ G + ++E S +A+ E KGFNF D
Sbjct: 443 IKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITEESTVKGFNFRD 502
Query: 418 PRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNF 477
R++ G W E + D ++FFR LA+CHTV+PE DE E+I+Y+A SPDEAA V AA+
Sbjct: 503 ERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEAAFVIAAREL 562
Query: 478 GFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYC 537
GF F+ RT T I VRE + GK + Y++LNVLEFNSTRKR SV+ + DG+L+L C
Sbjct: 563 GFEFFNRTQTTISVRELDLVS-GKRVERLYKVLNVLEFNSTRKRMSVIVQEEDGKLLLLC 621
Query: 538 KGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAK 597
KGAD+V++ERL+ + ++ TR+H+ ++ +GLRTL LAYR+L Y+ +NE+ +AK
Sbjct: 622 KGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEKEYKVFNERISEAK 681
Query: 598 SSLR-DREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKM 656
SS+ DRE ++EV E IEKDL L+G TA+EDKLQ GVP CI+ LA+AGIKIWVLTGDKM
Sbjct: 682 SSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKM 741
Query: 657 ETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEA 716
ETAINI +AC+L+ +MKQ II ET I+ +E+ G+ IA+ +E V L++ I+
Sbjct: 742 ETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKENV---LSQIINGK 798
Query: 717 QQYIHSISGEKLALIIDGKCLMYALDPSLRXXXXXXXXXXXXXXXXXXXPLQKAQVTSLV 776
Q +S G ALIIDGK L YALD ++ P QKA VT LV
Sbjct: 799 TQLKYS-GGNAFALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSSPKQKALVTRLV 857
Query: 777 KKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHG 836
K G K TL+IGDGANDV M+Q A IGVGISG EGMQAVM+SD AIAQFR+L LLLVHG
Sbjct: 858 KSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHG 917
Query: 837 RWSYLRICKVVLYFFYKNXXXXXXXXXXXXXXXXSGQRFYDDWFQSLYNVIFTSMPVIML 896
W Y RI ++ YFFYKN S Y+DWF SLYNV F+S+PVI L
Sbjct: 918 HWCYRRISTMICYFFYKNITFGFTLFLYETYTTFSSTPAYNDWFLSLYNVFFSSLPVIAL 977
Query: 897 GLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYN-CVTTSSATGQ 955
G+F++DVSA K+P LYQEG++NV F+WR + W F Y +++++ C ++ +
Sbjct: 978 GVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILGWMFNGFYSAVIIFFLCKSSLQSQAF 1037
Query: 956 NSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGI 1015
N GK G + +TC+V VNL++ + + T +I + SI+ W+ F+ +Y +
Sbjct: 1038 NHDGKTPGREILGGTMYTCIVWVVNLQMALAISYFTLIQHIVIWSSIVVWYFFITVYGEL 1097
Query: 1016 MTPNDRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQ--- 1072
+ FV + S Y+ TL +V V L+ FI+ +Q F P + ++Q
Sbjct: 1098 PSRISTGAYKVFVEALAPSLSYWLITLFVV-VATLMPYFIYSALQMSFFPMYHGMIQWLR 1156
Query: 1073 -EMHRHDPE 1080
E +DPE
Sbjct: 1157 YEGQCNDPE 1165
|
|
| TAIR|locus:2031860 ACA.l "autoinhibited Ca2+/ATPase II" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2215 (784.8 bits), Expect = 1.4e-229, P = 1.4e-229
Identities = 486/1092 (44%), Positives = 656/1092 (60%)
Query: 13 RRVANCYFLMISILXXXXXXXXXXXXXXXXXXXXXXXXXIKEAWEDWKRFQNDMTINSTP 72
RRVAN YFL+ +L +KEA EDW R + D+ +N+
Sbjct: 80 RRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMVKEAIEDWGRKKQDIEMNNRK 139
Query: 73 VEVLQGQR-WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETN 131
V+V G + WR L+VG+IV V++D FFPADLL L+S+ D +CY+ET NLDGETN
Sbjct: 140 VKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLSSSYEDSICYVETMNLDGETN 199
Query: 132 LKIRKALERTWDYLTPEKA-SEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLR 190
LK+++ LE T L + E K V+CE PN LYTF G L ++Q LPL+ Q+LLR
Sbjct: 200 LKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVGTLHFEEQRLPLSITQLLLR 259
Query: 191 GCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICA 250
LRNTEYI G V+F GH+TKV+ NS + PSKRS +ERK+DK+I +F V+ L+
Sbjct: 260 DSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKMDKIIYLMFG---VVFLMSF 316
Query: 251 IGSAIF-IDKKHYYLGLHNMGNS----VEDDQ----FNPDKRFLVFVLNMFTLITLYSPI 301
IGS +F I+ + + N G + + D F+PD+ + V + FT + LYS
Sbjct: 317 IGSIVFGIETREDRV--RNGGRTERWYLRPDNADIFFDPDRAPMAAVYHFFTAVMLYSYF 374
Query: 302 IPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGT 361
IPISLYVSIE +K QS +IN D+ MY+ E++ PA ARTSNLNEELG V+ I SDKTGT
Sbjct: 375 IPISLYVSIEIVKVLQSL-FINNDILMYYEENDKPAHARTSNLNEELGMVDTILSDKTGT 433
Query: 362 LTRNLMEFFKCSXXXXXXXXXXXXXXRGVAQQT-GMKIPEVERSVKAVHE----KGFNFD 416
LT N MEF KCS R +A ++ G + + V KGFNF
Sbjct: 434 LTCNSMEFIKCSIAGTAYGRGITEVERSMAMRSNGSSLVGDDLDVVVDQSGPKIKGFNFL 493
Query: 417 DPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKN 476
D R+++G W + + ++FFR LA+CHT +PE DE+ ++Y+A SPDEAA V AA+
Sbjct: 494 DERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSYEAESPDEAAFVVAARE 553
Query: 477 FGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLY 536
FGF F+ RT I RE + GK + Y +LNVLEFNS RKR SV+ R DGRL+L
Sbjct: 554 FGFEFFSRTQNGISFRELDLAS-GKTVERVYRLLNVLEFNSARKRMSVIVRDEDGRLLLL 612
Query: 537 CKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQA 596
KGAD+V++ERLA ++ TREH+ ++ +GLRTL LAYR++ + Y +++ F +A
Sbjct: 613 SKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREVDENEYIEFSKNFNEA 672
Query: 597 KSSLR-DREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDK 655
K+S+ DRE +DE+ E +E+DL L+G TA+EDKLQ GVP CI+ LA+AGIKIWVLTGDK
Sbjct: 673 KNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDK 732
Query: 656 METAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELN--KCI 713
METAINI +AC+L+ EMKQ II ET I+ +E+ G+ I RE V ++ K +
Sbjct: 733 METAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHASRESVVNQMEEGKAL 792
Query: 714 DEAQQYIHSISGEKLALIIDGKCLMYALDPSLRXXXXXXXXXXXXXXXXXXXPLQKAQVT 773
A + S E ALIIDGK L YAL+ + P QKA VT
Sbjct: 793 LTASS--SASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVICCRSSPKQKALVT 850
Query: 774 SLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLL 833
LVK G K TL+IGDGANDV M+Q A IGVGISG EGMQAVM+SD AIAQFR+L LLL
Sbjct: 851 RLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLL 910
Query: 834 VHGRWSYLRICKVVLYFFYKNXXXXXXXXXXXXXXXXSGQRFYDDWFQSLYNVIFTSMPV 893
VHG W Y RI ++ YFFYKN S Q Y+DWF SL+NV F+S+PV
Sbjct: 911 VHGHWCYSRISSMICYFFYKNITFGVTVFLYEAYTSFSAQPAYNDWFLSLFNVFFSSLPV 970
Query: 894 IMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSL-VLYNCVTTSSA 952
I LG+F++DVSA K+P LYQEG++N+ F+W+ + W F V+ +L + + C +
Sbjct: 971 IALGVFDQDVSARYCYKFPLLYQEGVQNLLFSWKRIIGWMFNGVFTALAIFFLCKESLKH 1030
Query: 953 TGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLY 1012
N +GK G + +TCVV VNL++ + + T +I + GS+ W++F+ +Y
Sbjct: 1031 QLYNPNGKTAGREILGGTMYTCVVWVVNLQMALAISYFTWLQHIVIWGSVAFWYIFLMIY 1090
Query: 1013 TGIMTPNDRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQ 1072
G +TP+ + I L ++ T + V AL+ F+F+ VQ F P +Q++Q
Sbjct: 1091 -GAITPSFSTDAYKVFIEALAPAPSYWLTTLFVMFFALIPFFVFKSVQMRFFPGYHQMIQ 1149
Query: 1073 ----EMHRHDPE 1080
E H +DPE
Sbjct: 1150 WIRYEGHSNDPE 1161
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|
| TAIR|locus:2007858 AT1G17500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2193 (777.0 bits), Expect = 3.0e-227, P = 3.0e-227
Identities = 483/1113 (43%), Positives = 666/1113 (59%)
Query: 3 LPFYQKGCLNR---RVANCYFLMISILXXXXXXXXXXXXXXXXXXXXXXXXXIKEAWEDW 59
+ F+ K CL R AN YFL+ +IL +KEA EDW
Sbjct: 71 ITFFPK-CLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLKEALEDW 129
Query: 60 KRFQNDMTINSTPVEVLQGQ-RWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 118
RF D+ IN++ V V + + W+K+ VGDIV V++DGFFPADLL L+S+ DG+
Sbjct: 130 SRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLLLSSSYEDGI 189
Query: 119 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQ 178
CY+ET NLDGETNLK++++LE T + +F G ++CE PN SLYTF GNL ++Q
Sbjct: 190 CYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTFVGNLEYERQ 249
Query: 179 TLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILAL 238
PL+P+QILLR LRNT Y+ G V+F GH+TKVM NS PSKRS +E+ +D +I L
Sbjct: 250 IFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKTMDYIIYTL 309
Query: 239 FATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQF-NPDKRFLVFVLNMFTLITL 297
L ++ LI I S+ F + +++ E + NP +++ T + L
Sbjct: 310 ---LVLLILISCISSSGFAWETKFHMPKWWYLRPEEPENLTNPSNPVYAGFVHLITALLL 366
Query: 298 YSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSD 357
Y +IPISLYVSIE +K Q++ +INKDLHMY +ES PA ARTSNLNEELGQV+ I SD
Sbjct: 367 YGYLIPISLYVSIEVVKVLQAS-FINKDLHMYDSESGVPAHARTSNLNEELGQVDTILSD 425
Query: 358 KTGTLTRNLMEFFKCSXXXXXXXXXXXXXXRGVAQQTGMKI------------P------ 399
KTGTLT N M+F KCS AQQ + + P
Sbjct: 426 KTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTPRAQARD 485
Query: 400 -EVERSVKA-VHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPER 457
EVE S+ + KGF F+D RL+ G W E + D FFR LAICHT +PE +E +
Sbjct: 486 IEVESSITPRIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIPELNEETGK 545
Query: 458 ITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNS 517
TY+A SPDEA+ +TAA FGF F++RT + +YV E + G+ + Y++LN+L+F S
Sbjct: 546 YTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHE-RLSHSGQTIEREYKVLNLLDFTS 604
Query: 518 TRKRQSVVCRYADGRLVLYCKGADSVIYERLA-NGNEDLKKVTREHLEQFGSSGLRTLCL 576
RKR SVV R +G+++L CKGADS+I+ERLA NG L T+ HL ++G +GLRTL L
Sbjct: 605 KRKRMSVVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTK-HLNEYGEAGLRTLAL 663
Query: 577 AYRDLSPDMYERWNEKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVP 635
+YR L + Y WN +F +AK+S+ DR++ L+ ++++IEKDL L+G TA+EDKLQ+GVP
Sbjct: 664 SYRKLDEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDKLQKGVP 723
Query: 636 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPV 695
CI+ LA+AG+K+WVLTGDKMETAINI Y+C+L+ MKQ IT V G
Sbjct: 724 QCIDKLAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITV-------VNSEGASQ 776
Query: 696 EIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRXXXXXXXXX 755
+ A+ +++ + ++ K + + + ALIIDGK L YAL+ ++
Sbjct: 777 D-AKAVKDNILNQITKAVQMVK--LEKDPHAAFALIIDGKTLTYALEDEMKYQFLALAVD 833
Query: 756 XXXXXXXXXXPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAV 815
P QKA VT LVK+G KITL+IGDGANDV MIQ A IGVGISG EGMQAV
Sbjct: 834 CASVICCRVSPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQAV 893
Query: 816 MASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNXXXXXXXXXXXXXXXXSGQRF 875
MASDF+IAQFRFL LL+VHG W Y RI +++ YFFYKN SGQ
Sbjct: 894 MASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSV 953
Query: 876 YDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFF 935
Y+D++ L+NV+ TS+PVI LG+FE+DVS+ + ++P LYQ+G KN+FF W + W
Sbjct: 954 YNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICLQFPALYQQGKKNLFFDWYRILGWMGN 1013
Query: 936 SVYQSLVLYNC-VTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFH 994
VY SLV++ + SG+ + V T FTC++ VN+++ + + T
Sbjct: 1014 GVYSSLVIFFLNIGIIYEQAFRVSGQTADMDAVGTTMFTCIIWAVNVQIALTVSHFTWIQ 1073
Query: 995 YITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLMSTFYFYF-TLILVPVLALLGD 1053
++ + GSI W+LFV LY G+M P+ N++ ++ +++ Y+ LV V +L
Sbjct: 1074 HVLIWGSIGLWYLFVALY-GMMPPS-LSGNIYRILVEILAPAPIYWIATFLVTVTTVLPY 1131
Query: 1054 FIFQGVQRWFSPYDYQIVQEM--HRHDPEDRRM 1084
F QR+ P D+ I+QE+ ++ D EDRRM
Sbjct: 1132 FAHISFQRFLHPLDHHIIQEIKYYKRDVEDRRM 1164
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| TAIR|locus:2030180 AT1G72700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1418 (504.2 bits), Expect = 4.4e-226, Sum P(2) = 4.4e-226
Identities = 299/682 (43%), Positives = 423/682 (62%)
Query: 411 KGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAAL 470
KGF F+D RL+ G W E P+ +FFR LAICHT +PE +E + TY+A SPDEA+
Sbjct: 510 KGFGFEDNRLMNGNWLRESQPNDILQFFRILAICHTAIPELNEETGKYTYEAESPDEASF 569
Query: 471 VTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD 530
+ AA+ FGF F++RT + +++RE G++ + Y++LN+LEF S RKR +V+ R +
Sbjct: 570 LAAAREFGFEFFKRTQSSVFIRE-RFSGSGQIIEREYKVLNLLEFTSKRKRMTVIVRDEE 628
Query: 531 GRLVLYCKGADSVIYERLA-NGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERW 589
G+++L CKGADS+I+ERLA NG L TR HL ++G +GLRTL LAYR L D Y W
Sbjct: 629 GQILLLCKGADSIIFERLAKNGKTYLGPTTR-HLTEYGEAGLRTLALAYRKLDEDEYAAW 687
Query: 590 NEKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKI 648
N +F++AK+S+ DR++ L+ A++IEK+L LIG TA+EDKLQ+GVP CI+ LA+AG+K+
Sbjct: 688 NSEFLKAKTSIGSDRDELLETGADMIEKELILIGATAVEDKLQKGVPQCIDKLAQAGLKL 747
Query: 649 WVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708
WVLTGDKMETAINI +AC+L+ M+Q ITS + G + R ++E + +
Sbjct: 748 WVLTGDKMETAINIGFACSLLRQGMRQICITS-------MNSEGGSQDSKRVVKENILNQ 800
Query: 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRXXXXXXXXXXXXXXXXXXXPLQ 768
L K + + + ALIIDGK L YAL+ ++ P Q
Sbjct: 801 LTKAVQMVK--LEKDPHAAFALIIDGKTLTYALEDDMKYQFLALAVDCASVICCRVSPKQ 858
Query: 769 KAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFL 828
KA V LVK+G K TL+IGDGANDV MIQ A IGVGISG EGMQAVMASDF+IAQFRFL
Sbjct: 859 KALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFL 918
Query: 829 TDLLLVHGRWSYLRICKVVLYFFYKNXXXXXXXXXXXXXXXXSGQRFYDDWFQSLYNVIF 888
LL+VHG W Y RI +++ YFFYKN SGQ Y+D++ L+NV+
Sbjct: 919 ERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLFNVVL 978
Query: 889 TSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLY--NC 946
TS+PVI LG+FE+DVS+ + ++P LYQ+G KN+FF W + W VY SLV++ N
Sbjct: 979 TSLPVIALGVFEQDVSSEICLQFPALYQQGTKNLFFDWSRILGWMCNGVYASLVIFFLNI 1038
Query: 947 -VTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAW 1005
+ S A N G+ + V T FTC++ N+++ + + T ++ + GSI W
Sbjct: 1039 GIIYSQAFRDN--GQTADMDAVGTTMFTCIIWAANVQIALTMSHFTWIQHVLIWGSIGMW 1096
Query: 1006 FLFVFLYTGIMTPNDRQENVFFVIFVLMSTFYFYF-TLILVPVLALLGDFIFQGVQRWFS 1064
+LFV +Y+ M P N++ ++ +++ Y+ +LV V A+L QR+ +
Sbjct: 1097 YLFVAIYS--MMPPSYSGNIYRILDEILAPAPIYWMATLLVTVAAVLPYVAHIAFQRFLN 1154
Query: 1065 PYDYQIVQEM--HRHDPEDRRM 1084
P D+ I+QE+ + D ED R+
Sbjct: 1155 PLDHHIIQEIKYYGRDIEDARL 1176
|
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| TAIR|locus:2088217 AT3G13900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1370 (487.3 bits), Expect = 3.9e-225, Sum P(2) = 3.9e-225
Identities = 295/680 (43%), Positives = 414/680 (60%)
Query: 411 KGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAAL 470
KGF+F+D RL+ G W NE N D F R LA+CHT +PE DE + TY+A SPDE A
Sbjct: 519 KGFSFEDQRLMGGNWLNEPNSDDILMFLRILAVCHTAIPEVDEDTGKCTYEAESPDEVAF 578
Query: 471 VTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD 530
+ AA FGF F +RT + +++ E H G+ + Y++LNVL+F S RKR SV+ R
Sbjct: 579 LVAAGEFGFEFTKRTQSSVFISERH---SGQPVEREYKVLNVLDFTSKRKRMSVIVRDEK 635
Query: 531 GRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWN 590
G+++L CKGADS+I+ERL+ ++ + T +HL +G +GLRTL L+YR L Y WN
Sbjct: 636 GQILLLCKGADSIIFERLSKNGKNYLEATSKHLNGYGEAGLRTLALSYRKLDETEYSIWN 695
Query: 591 EKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIW 649
+F +AK+S+ DR++ L++V++++EK+L L+G TA+EDKLQ+GVP CI+ LA+AG+KIW
Sbjct: 696 SEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 755
Query: 650 VLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKREL 709
VLTGDKMETAINI YAC+L+ MKQ I A+R+ E E A RE + L
Sbjct: 756 VLTGDKMETAINIGYACSLLRQGMKQIYI-----ALRNEEGSSQDPEAAA--RENI---L 805
Query: 710 NKCIDEAQQY-IHSISGEKLALIIDGKCLMYALDPSLRXXXXXXXXXXXXXXXXXXXPLQ 768
+ I+ +Q + ALIIDGK L YAL+ ++ P Q
Sbjct: 806 MQIINASQMIKLEKDPHAAFALIIDGKTLTYALEDDIKYQFLALAVDCASVICCRVSPKQ 865
Query: 769 KAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFL 828
KA VT L K+G K TL+IGDGANDV MIQ A IGVGISG EGMQAVMASDF+IAQFRFL
Sbjct: 866 KALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFL 925
Query: 829 TDLLLVHGRWSYLRICKVVLYFFYKNXXXXXXXXXXXXXXXXSGQRFYDDWFQSLYNVIF 888
LL+VHG W Y RI +++ YFFYKN SGQ Y+D + L+NVI
Sbjct: 926 ERLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFEAFTGFSGQAIYNDSYLLLFNVIL 985
Query: 889 TSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNC-V 947
TS+PVI LG+FE+DVS+ + ++P LYQ+G KN+FF W + W VY S+V+++ +
Sbjct: 986 TSLPVIALGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRIIGWMANGVYASVVIFSLNI 1045
Query: 948 TTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFL 1007
S G+ + + T FTC++ VN+++ + + T ++ + GSI+ W++
Sbjct: 1046 GIFHVQSFCSGGQTADMDAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVLIWGSIVTWYI 1105
Query: 1008 FVFLYTGIMTPNDRQENVFFVIF-VLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPY 1066
F+ L+ G++ P N+F ++ L F+ T +LV L + QR +P
Sbjct: 1106 FLALF-GMLPPKV-SGNIFHMLSETLAPAPIFWLTSLLVIAATTLPYLAYISFQRSLNPL 1163
Query: 1067 DYQIVQEM-H-RHDPEDRRM 1084
D+ I+QE+ H R D +D M
Sbjct: 1164 DHHIIQEIKHFRIDVQDECM 1183
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| TAIR|locus:2020038 AT1G54280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1365 (485.6 bits), Expect = 1.5e-223, Sum P(2) = 1.5e-223
Identities = 297/680 (43%), Positives = 410/680 (60%)
Query: 411 KGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAAL 470
KGF+F+D RL+ W NE N D FFR LA+CHT +PE DE TY+A SPDE A
Sbjct: 519 KGFSFEDNRLMNENWLNEPNSDDILMFFRILAVCHTAIPEVDEDTGMCTYEAESPDEVAF 578
Query: 471 VTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD 530
+ A++ FGF F +RT + +++ E G+ D Y+ILN+L+F S RKR S + R +
Sbjct: 579 LVASREFGFEFTKRTQSSVFIAE-RFSSSGQPVDREYKILNLLDFTSKRKRMSAIVRDEE 637
Query: 531 GRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWN 590
G+++L CKGADS+I+ERL+ ++ T +HL +G +GLRTL L YR L Y WN
Sbjct: 638 GQILLLCKGADSIIFERLSKSGKEYLGATSKHLNVYGEAGLRTLALGYRKLDETEYAAWN 697
Query: 591 EKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIW 649
+F +AK+S+ DR++ L++V++++EK+L L+G TA+EDKLQ+GVP CI+ LA+AG+KIW
Sbjct: 698 SEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKIW 757
Query: 650 VLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKREL 709
VLTGDKMETAINI YAC+L+ MKQ I S TN VEE E A +E + ++
Sbjct: 758 VLTGDKMETAINIGYACSLLRQGMKQISI-SLTN----VEESSQNSEAAA--KESILMQI 810
Query: 710 NKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRXXXXXXXXXXXXXXXXXXXPLQK 769
+ I ALIIDGK L YAL ++ P QK
Sbjct: 811 TNASQMIK--IEKDPHAAFALIIDGKTLTYALKDDVKYQFLALAVDCASVICCRVSPKQK 868
Query: 770 AQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLT 829
A VT L K+G K TL+IGDGANDV MIQ A IGVGISG EGMQAVMASDF+IAQFRFL
Sbjct: 869 ALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLE 928
Query: 830 DLLLVHGRWSYLRICKVVLYFFYKNXXXXXXXXXXXXXXXXSGQRFYDDWFQSLYNVIFT 889
LL+VHG W Y RI +++ YFFYKN SGQ Y+D + L+NV+ T
Sbjct: 929 RLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFECFTGFSGQSIYNDSYLLLFNVVLT 988
Query: 890 SMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNC-VT 948
S+PVI LG+FE+DV + + ++P LYQ+G KN+FF W + W VY S+V++ +
Sbjct: 989 SLPVISLGVFEQDVPSDVCLQFPALYQQGPKNLFFDWYRILGWMGNGVYASIVIFTLNLG 1048
Query: 949 TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLF 1008
S G+ + + T FTC++ VN+++ + + T ++ + GSI AW++F
Sbjct: 1049 IFHVQSFRSDGQTADMNAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVMIWGSIGAWYVF 1108
Query: 1009 VFLYTGIMTPNDRQENVFFVIF-VLMSTFYFYFTLILVPVLALLGDFIFQ-GVQRWFSPY 1066
+ LY G M P N+F ++ +L F+ T +LV + A ++F QR +P
Sbjct: 1109 LALY-G-MLPVKLSGNIFHMLVEILAPAPIFWLTSLLV-IAATTLPYLFHISYQRSVNPL 1165
Query: 1067 DYQIVQEM-H-RHDPEDRRM 1084
D+ I+QE+ H R D ED RM
Sbjct: 1166 DHHIIQEIKHFRIDVEDERM 1185
|
|
| UNIPROTKB|L7N093 LOC486036 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 793 (284.2 bits), Expect = 6.4e-197, Sum P(3) = 6.4e-197
Identities = 174/368 (47%), Positives = 234/368 (63%)
Query: 316 FQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSXX 375
+ +IN D M++ E+N A ARTSNLNEELGQV+Y+FSDKTGTLT N+M+F KCS
Sbjct: 361 YVQAMFINWDEDMHYKENNIYAIARTSNLNEELGQVKYLFSDKTGTLTCNIMKFKKCSIA 420
Query: 376 XXXXXXXXXXXXRGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEH-NPDAC 434
+ ++ + + SV + + F+DP LL+ + N H D
Sbjct: 421 GIIYGFPQESVRQN---KSSLFFLSLSPSVLT---ESYEFNDPTLLQN-FENGHPTKDYI 473
Query: 435 KEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRES 494
KEF L +CHTV+PE DE ++I YQA+SPDEAALV K GF F RTPT + +
Sbjct: 474 KEFLTLLCVCHTVIPERDE--DKIIYQASSPDEAALVKWVKKLGFVFTTRTPTSVTI--- 528
Query: 495 HVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNED 554
E MG ++ +EILN+LEF+S RKR SV+ R G L LYCKGAD+VIYERL+ +
Sbjct: 529 --EAMG--ENFTFEILNILEFSSNRKRMSVIVRTPTGNLRLYCKGADTVIYERLSEDSLF 584
Query: 555 LKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELI 614
+K+ T HLE F GLRTLC+AY DL+ + Y++W ++ +A S ++DR Q L+E + I
Sbjct: 585 MKE-TLTHLEHFAKGGLRTLCVAYTDLTEEEYQQWLTEYKKASSVIQDRMQSLEECYDKI 643
Query: 615 EKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK 674
EK L+G TAIED+LQ VP I TL +A I+IWVLTGDK ETAINIAY+C LI+ +M
Sbjct: 644 EKKFLLLGATAIEDRLQARVPETIVTLLKANIRIWVLTGDKQETAINIAYSCKLISAQMP 703
Query: 675 QFIITSET 682
+ + + +
Sbjct: 704 RIRLNTHS 711
|
|
| POMBASE|SPBC887.12 SPBC887.12 "P-type ATPase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 719 (258.2 bits), Expect = 1.6e-192, Sum P(3) = 1.6e-192
Identities = 156/375 (41%), Positives = 230/375 (61%)
Query: 2 FLPFYQKGCLNRRVANCYFLMISILXXXXXXXXXXXXXXXX-XXXXXXXXXIKEAWEDWK 60
FLP + K ++ AN +FL +++ IKE ED K
Sbjct: 172 FLPKFLKEQFSK-YANLFFLFTAVVQQIPGITPVNRYTTIGPMLIVLSVSGIKEIMEDIK 230
Query: 61 RFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCY 120
R + D +N +P VLQG +V W+ + VGDIV + + FFPADL+ L+S+ +G+CY
Sbjct: 231 RKKQDQELNESPCYVLQGTGFVEKQWKDVVVGDIVKIVSETFFPADLVLLSSSEPEGLCY 290
Query: 121 IETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTF--TGNLIMQKQ 178
IETANLDGETNLKI++AL T L P + + GEV+ EQPNN+LYTF T L+ +
Sbjct: 291 IETANLDGETNLKIKQALPETAGLLKPVELGQLSGEVKSEQPNNNLYTFDATLKLLPSDR 350
Query: 179 TLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILAL 238
LPL+P+Q+LLRG LRNT ++ G V+F GHE+K+M N+ P KR+++E++++ IL L
Sbjct: 351 ELPLSPDQLLLRGAQLRNTPWVYGIVVFTGHESKLMKNTTETPIKRTSVEKQVNSQILFL 410
Query: 239 FATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLY 298
+C ++G+ I + Y G+++ ++ ++ + F + T LY
Sbjct: 411 LCIFVFLCFASSLGALIH---RSVY------GSALSYVKYTSNRAGMFFK-GLLTFWILY 460
Query: 299 SPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDK 358
S ++PISL+V+ E +++ Q+ Q I+ DL MY+ E++TPA+ RTS+L EELGQV YIFSDK
Sbjct: 461 SNLVPISLFVTFELVRYIQA-QLISSDLDMYNEETDTPAACRTSSLVEELGQVGYIFSDK 519
Query: 359 TGTLTRNLMEFFKCS 373
TGTLTRN MEF +C+
Sbjct: 520 TGTLTRNQMEFRQCT 534
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q29449 | AT8A1_BOVIN | 3, ., 6, ., 3, ., 1 | 0.4222 | 0.8403 | 0.8476 | yes | no |
| Q9NTI2 | AT8A2_HUMAN | 3, ., 6, ., 3, ., 1 | 0.4263 | 0.8610 | 0.8693 | yes | no |
| Q9XIE6 | ALA3_ARATH | 3, ., 6, ., 3, ., 1 | 0.7911 | 0.9887 | 0.9447 | yes | no |
| P70704 | AT8A1_MOUSE | 3, ., 6, ., 3, ., 1 | 0.4278 | 0.8403 | 0.8476 | yes | no |
| O94296 | YOOC_SCHPO | 3, ., 6, ., 3, ., 1 | 0.4255 | 0.8861 | 0.8163 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1159 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-140 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 6e-53 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 3e-30 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 4e-28 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 7e-27 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-15 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 6e-11 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 7e-11 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-08 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 4e-08 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 7e-06 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-05 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 2e-05 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-05 | |
| cd02637 | 65 | cd02637, R3H_PARN, R3H domain of Poly(A)-specific | 4e-05 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 5e-05 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 3e-04 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 3e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 6e-04 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 0.001 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 0.002 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 1440 bits (3729), Expect = 0.0
Identities = 548/1082 (50%), Positives = 719/1082 (66%), Gaps = 50/1082 (4%)
Query: 2 FLPFYQKGCLN--RRVANCYFLMISILSTTP-MSPVNPVTNVVPLSLVLLVSLIKEAWED 58
FLP K +R AN YFL++++L P +SP T++VPL+ VL+V+ IKEA ED
Sbjct: 16 FLP---KNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIED 72
Query: 59 WKRFQNDMTINSTPVEVLQG-QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADG 117
+R + D +N+ EVL+G ++V IPW+ L+VGDIV VK+D PADLL L+S+ DG
Sbjct: 73 IRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDG 132
Query: 118 VCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQ- 176
VCY+ETANLDGETNLK+R+ALE T L + F GE++CEQPN SLY+F GN+ +
Sbjct: 133 VCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTING 192
Query: 177 KQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLIL 236
+ PL+P+ ILLRGC+LRNT+++IG V++ GH+TK+M N+ PSKRS LE++L+ LI+
Sbjct: 193 DRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKRSRLEKELNFLII 252
Query: 237 ALFATLTVMCLICAIGSAIFID---KKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFT 293
LF L V+CLI ++G+ I+ D K +Y+ L + + F + T
Sbjct: 253 ILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGF----------FSFLT 302
Query: 294 LITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEY 353
+ L+S +IPISLYVS+E +K Q+ +IN DL MYH +++TPAS RTSNLNEELGQVEY
Sbjct: 303 FLILFSSLIPISLYVSLELVKSVQA-YFINSDLQMYHEKTDTPASVRTSNLNEELGQVEY 361
Query: 354 IFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGF 413
IFSDKTGTLT+N+MEF KCSI G YG G TEI+ G+ ++ G + + V KGF
Sbjct: 362 IFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENSML--VESKGF 419
Query: 414 NFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEG-DESPERITYQAASPDEAALVT 472
F DPRL+ N+ N EFF LA+CHTV+PE D+ PE ITYQAASPDEAALV
Sbjct: 420 TFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVK 479
Query: 473 AAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGR 532
AA++ GF F+ RTP I + + YEILNVLEFNS RKR SV+ R DGR
Sbjct: 480 AARDVGFVFFERTPKSISLLIEMH-----GETKEYEILNVLEFNSDRKRMSVIVRNPDGR 534
Query: 533 LVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEK 592
+ L CKGAD+VI++RL++G + + T+EHLE + S GLRTLC+AYR+LS + YE WNE+
Sbjct: 535 IKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEE 594
Query: 593 FIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLT 652
+ +A ++L DRE+KLD VAE IEKDL L+G TAIEDKLQEGVP IE L +AGIKIWVLT
Sbjct: 595 YNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLT 654
Query: 653 GDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKC 712
GDK+ETAINI Y+C L++ M+Q +ITS++ + R + +K L
Sbjct: 655 GDKVETAINIGYSCRLLSRNMEQIVITSDSL------------DATRSVEAAIKFGLEGT 702
Query: 713 IDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQV 772
+E + +AL+IDGK L YALD L L L+L C +V+CCRVSP QKA V
Sbjct: 703 SEEFN---NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADV 759
Query: 773 TSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLL 832
LVKK K TL+IGDGANDVSMIQ A +GVGISG+EGMQAVMASDFAI QFRFLT LL
Sbjct: 760 VRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLL 819
Query: 833 LVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMP 892
LVHGRWSY RI K++LYFFYKNL F + QFW++F GFSGQ Y+ W+ LYNV FT++P
Sbjct: 820 LVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALP 879
Query: 893 VIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSA 952
VI LG+F++DVSASLS +YPQLY+EG K F+ + W +YQSLV++ +
Sbjct: 880 VISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYI 939
Query: 953 TGQ-NSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFL 1011
G SSG + V + FT +VV VNL++ + N IT+ GSIL W +FV +
Sbjct: 940 LGDFVSSGSVDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIV 999
Query: 1012 YTGIMTPNDRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIV 1071
Y+ I + +M TF F+ L+++ +++LL F ++ +QR F P DY IV
Sbjct: 1000 YSSIFP----SPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIV 1055
Query: 1072 QE 1073
QE
Sbjct: 1056 QE 1057
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 707 bits (1827), Expect = 0.0
Identities = 404/1097 (36%), Positives = 614/1097 (55%), Gaps = 88/1097 (8%)
Query: 14 RVANCYFLMISILSTTPMSPV-NPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTP 72
RVA YFL+I++L+ P V +++PL+ VLLV+ +K+A+EDW+R ++D N+
Sbjct: 113 RVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRL 172
Query: 73 VEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNL 132
VL ++ W+ ++VG+I+ ++ + P D++ L++++ GV Y++T NLDGE+NL
Sbjct: 173 AWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNL 232
Query: 133 KIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGC 192
K R A + T + PEK G ++CE+PN ++Y F N+ + + L L P+ I+LRGC
Sbjct: 233 KTRYAKQETLSKI-PEKEK-INGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGC 290
Query: 193 SLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIG 252
L+NT + IG ++ G ETK M+N+ PSKRS LE +++ I+ L L +C I ++
Sbjct: 291 ELKNTAWAIGVAVYCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVC 350
Query: 253 SAI-------------FIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYS 299
+A+ F +K + + +N + ++
Sbjct: 351 AAVWLRRHRDELDTIPFYRRKDF--------SEGGPKNYNYYGWGWEIFFTFLMSVIVFQ 402
Query: 300 PIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKT 359
+IPISLY+S+E ++ Q+ I D MY SN+ R N+NE+LGQ++Y+FSDKT
Sbjct: 403 IMIPISLYISMELVRVGQAYFMIR-DDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKT 461
Query: 360 GTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGM---KIPEVERSVKAVHEKGFNFD 416
GTLT N MEF SI G Y G T + A + KI + VK
Sbjct: 462 GTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKV--------- 512
Query: 417 DPRLLRGAWRNEHNPDACK---EFFRCLAICHTVLP-----EGDESPERITYQAASPDEA 468
DP+LL + ++ + + K +FF LA C+T++P D + + + YQ SPDE
Sbjct: 513 DPQLLELS-KSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQ 571
Query: 469 ALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRY 528
ALV AA +GF RT I + + G+ Q + +L + EF+S RKR SV+
Sbjct: 572 ALVYAAAAYGFMLIERTSGHIVI-----DIHGERQR--FNVLGLHEFDSDRKRMSVILGC 624
Query: 529 ADGRLVLYCKGADSVIYERLANG-NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYE 587
D + ++ KGAD+ ++ + N ++ + T HL + S GLRTL + R+L+ +E
Sbjct: 625 PDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFE 684
Query: 588 RWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIK 647
+W+ F A ++L R L +VA +E +LT++G +AIEDKLQ+GVP IE+L AGIK
Sbjct: 685 QWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIK 744
Query: 648 IWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707
+WVLTGDK ETAI+I Y+ L+ N+M Q II S + E +E A M +++
Sbjct: 745 VWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSK-----ESCRKSLEDALVMSKKLT- 798
Query: 708 ELNKCIDEAQQYIHSISGEK---LALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRV 764
+ Q S +ALIIDG L+Y LD L L L+ CS V+CCRV
Sbjct: 799 ----TVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRV 854
Query: 765 SPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 824
+PLQKA + +LVK +TL+IGDGANDVSMIQ A +GVGISGQEG QAVMASDFA+ Q
Sbjct: 855 APLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQ 914
Query: 825 FRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLY 884
FRFL LLLVHG W+Y R+ ++LY FY+N F L FW+ T F+ ++W LY
Sbjct: 915 FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLY 974
Query: 885 NVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLY 944
+VI+T++P I++G+ +KD+S KYPQLY G + + ++ + +++QS V++
Sbjct: 975 SVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVF 1034
Query: 945 NCVTTS--SATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYIT---VG 999
+ ++T SS I D+ T+A VV+ VNL L M I R+++IT +
Sbjct: 1035 FVPLFAYWASTIDGSS-----IGDLWTLA---VVILVNLHLAM---DIIRWNWITHAAIW 1083
Query: 1000 GSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGV 1059
GSI+A F+ V + I T ++ IF + T F+ L+ + V ALL F+ + +
Sbjct: 1084 GSIVATFICVIVIDAIPTLPG-----YWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKVL 1138
Query: 1060 QRWFSPYDYQIVQEMHR 1076
++F+P D QI +E +
Sbjct: 1139 YQYFTPCDVQIAREAEK 1155
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 447 bits (1152), Expect = e-140
Identities = 235/1026 (22%), Positives = 368/1026 (35%), Gaps = 256/1026 (24%)
Query: 45 LVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFP 104
++ + + + K + ++S +VL+ ++V IP +L GDIV+++ P
Sbjct: 114 VINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVP 173
Query: 105 ADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNN 164
ADL L S++ ++ + L GE+ ++AL T + + P
Sbjct: 174 ADLRLLESSDL----EVDESALTGESLPVEKQALPLT----------------KSDAPLG 213
Query: 165 SLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKR 224
L+ + +L G ++ + G V+ G ET+ + +P+K+
Sbjct: 214 -----------------LDRDNMLFSGTTVVSGR-AKGIVVATGFETEFGKIARLLPTKK 255
Query: 225 ST---LERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPD 281
L+RKL+KL L V+ L+ + + GL
Sbjct: 256 EVKTPLQRKLNKLGKFLL----VLALVLGALVFV-VGLFRGGNGLLES------------ 298
Query: 282 KRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASART 341
T + L +P L + Q + KD + R+
Sbjct: 299 ---------FLTALALAVAAVPEGLPAVVTIALALG-AQRMAKDNAIV----------RS 338
Query: 342 SNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEV 401
N E LG V+ I SDKTGTLT+N M K I G
Sbjct: 339 LNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG------------------------ 374
Query: 402 ERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQ 461
G + DD L + A F A+C++V PE + YQ
Sbjct: 375 ----------GKDIDDKDL--------KDSPALLRFLLAAALCNSVTPEKNGW-----YQ 411
Query: 462 AASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKR 521
A P E ALV A+ GF V Y IL + F+S RKR
Sbjct: 412 AGDPTEGALVEFAEKLGFSLDLSGLE-----------------VEYPILAEIPFDSERKR 454
Query: 522 QSVVCRYADGRLVLYCKGADSVIYER------LANGNEDLKKVTREHLEQFGSSGLRTLC 575
SV+ + +G+ +L+ KGA VI ER L E+ + E +++ S GLR L
Sbjct: 455 MSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLA 514
Query: 576 LAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVP 635
+AY+ L DR +K DEV E IE DL +G T IED +E V
Sbjct: 515 VAYKKL--------------------DRAEKDDEVDE-IESDLVFLGLTGIEDPPREDVK 553
Query: 636 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPV 695
IE L AGIK+W++TGD +ETAI IA C + +I
Sbjct: 554 EAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDG--------------- 598
Query: 696 EIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLN 755
EL+ DE L L
Sbjct: 599 -----------AELDALSDEE--------------------------------LAELVEE 615
Query: 756 CSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAV 815
S V RVSP QKA++ ++K + + GDG ND ++AA +G+ + G EG A
Sbjct: 616 LS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGIAM-GGEGTDAA 671
Query: 816 MASD--FAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQ 873
+ + L +V GR Y+ I K +LY KN+ LT ++ F+
Sbjct: 672 KEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSL---FNLF 728
Query: 874 RF-YDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIW 932
N++ S+P + LG+ + + S K P G + F ++ +
Sbjct: 729 FLPLTPLQLLWINLLTDSLPALALGVEDPE---SDVMKRP---PRGPEEGLFNRKIFWRF 782
Query: 933 AFFSVYQSLV-------LYNCVTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLM 985
S + LY ++ G + + T AFT +V+ L L
Sbjct: 783 ILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALL-----QTTAFTVLVLIQLLLTL- 836
Query: 986 MCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLMSTFYFYFTLILV 1045
+ R ++ S +L + + + + IF F + + +
Sbjct: 837 AVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIA 896
Query: 1046 PVLALL 1051
L LL
Sbjct: 897 VALLLL 902
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 194 bits (496), Expect = 6e-53
Identities = 86/386 (22%), Positives = 138/386 (35%), Gaps = 77/386 (19%)
Query: 37 VTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVM 96
+ L VLLV K ED R +D +N+ P VL+ W IP + L GD+V+
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVL 59
Query: 97 VKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGE 156
VK PAD + L+ G C+++ +NL GE+N ++ AL+ T G
Sbjct: 60 VKSGETVPADGVLLS-----GSCFVDESNLTGESNPVLKTALKETQ-----------SGT 103
Query: 157 VQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMN 216
+ + Y F G LI+ + P IL T I V+ G ET
Sbjct: 104 ITGDLVFAGTYVFGGTLIVV-----VTPTGIL-------TTVGRIAVVVKTGFET----- 146
Query: 217 SMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDD 276
R+ L+ K D+L +F ++ +
Sbjct: 147 -------RTPLQSKRDRLENFIFILFLLLLALAVFLYLFIR------------------- 180
Query: 277 QFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTP 336
+L ++ + ++P +L ++ D +
Sbjct: 181 -GWDPNSIFKALLRALIVLVI---VVPPALPAAVTVALAVG-------DARLAKK----G 225
Query: 337 ASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTG- 395
R N EELG+V+Y+ SDKTGTLT+N M I G + + +G
Sbjct: 226 ILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSSLVACDNNYLSGD 285
Query: 396 -MKIPEVERSVKAVHEKGFNFDDPRL 420
M+ ++ + N + L
Sbjct: 286 PMEKALLKSAELVGKADKGNKEYKIL 311
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 127 bits (320), Expect = 3e-30
Identities = 54/213 (25%), Positives = 74/213 (34%), Gaps = 61/213 (28%)
Query: 457 RITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFN 516
Y + P E AL+ +A+ G Y+IL+V F+
Sbjct: 278 DNNYLSGDPMEKALLKSAELVGKADKGNKE--------------------YKILDVFPFS 317
Query: 517 STRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCL 576
S KR SV+ DG +L+ KGA I ER N E + GLR L
Sbjct: 318 SVLKRMSVIVETPDGSDLLFVKGAPEFILERCNN--------YEEKYLELARQGLRVLAF 369
Query: 577 AYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPA 636
A ++L DL +G ED L+
Sbjct: 370 ASKELED---------------------------------DLEFLGLITFEDPLRPDAKE 396
Query: 637 CIETLARAGIKIWVLTGDKMETAINIAYACNLI 669
IE L AGIK+ ++TGD + TA IA +
Sbjct: 397 TIEELKAAGIKVVMITGDNVLTAKAIAKELGID 429
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 4e-28
Identities = 101/487 (20%), Positives = 173/487 (35%), Gaps = 110/487 (22%)
Query: 349 GQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAV 408
G+++ DKTGTLT + ++ RGV
Sbjct: 446 GKIDVCCFDKTGTLTEDGLDL------------------RGVQ-----------GLSGNQ 476
Query: 409 HEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVL-----PEGDESPERITYQAA 463
+D L + LA CH++ GD
Sbjct: 477 EFLKIVTEDSSLKPS------------ITHKALATCHSLTKLEGKLVGD----------- 513
Query: 464 SPDEAALVTAAKNFGFFFYRRTPTMIYVRES--HVEKMGKMQDVC----YEILNVLEFNS 517
P + + A G+ T+ ES + ++ I+ +F+S
Sbjct: 514 -PLDKKMFEA---TGW-------TLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSS 562
Query: 518 TRKRQSVVCRYAD-GRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCL 576
+R SV+ D + KGA I + E + +E L+ + G R L L
Sbjct: 563 ALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP--ETVPSDYQEVLKSYTREGYRVLAL 620
Query: 577 AYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPA 636
AY++L K K+ R+ +E +LT +G E+ L+
Sbjct: 621 AYKEL---------PKLTLQKAQDLSRDA--------VESNLTFLGFIVFENPLKPDTKE 663
Query: 637 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE 696
I+ L RA I+ ++TGD TA+++A C ++N + +E E G P +
Sbjct: 664 VIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEP------PESGKPNQ 717
Query: 697 IARFMREEVKRELNKC---IDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLS 753
I + + + + Q + + + L + GK L +LL L
Sbjct: 718 IKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAF-AVLQAHSPELLLRLL 776
Query: 754 LNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQ 813
+ + V R++P QK + L++K GDGAND ++ A +G+ +S E
Sbjct: 777 SHTT--VFARMAPDQKETLVELLQKLDY-TVGMCGDGANDCGALKQADVGISLSEAE--- 830
Query: 814 AVMASDF 820
A +A+ F
Sbjct: 831 ASVAAPF 837
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 7e-27
Identities = 184/853 (21%), Positives = 296/853 (34%), Gaps = 256/853 (30%)
Query: 46 VLLVSLIKEAWEDWK---RFQNDMTINST-PVEVLQGQRWVSIPWRKLQVGDIVMVKQDG 101
V+LV L+ A D+K +F+ S + V++G + I + VGDIV +
Sbjct: 139 VILVVLVT-AVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGD 197
Query: 102 FFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQ 161
PA DGV +I +L + E + +T E KG VQ
Sbjct: 198 VVPA----------DGV-FISGLSL---------EIDESS---ITGESDPIKKGPVQ--- 231
Query: 162 PNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE--YIIGAVIFAGHETKVMMNSMN 219
+ LL G + ++ AV K+MM
Sbjct: 232 -----------------------DPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQ 268
Query: 220 IPSKRSTLERKLDKL--ILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQ 277
+ L+ KL +L ++ F + + + + + + ++ ED Q
Sbjct: 269 AGEDSTPLQEKLSELAGLIGKFG-----MGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQ 323
Query: 278 FNPDKRFLVFVLNMFTLITLYSP-IIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTP 336
FL + T++ + P +P+++ TI S + + KD ++
Sbjct: 324 -----TFLDHFIIAVTIVVVAVPEGLPLAV-----TIALAYSMKKMMKDNNL-------- 365
Query: 337 ASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGM 396
R E +G I SDKTGTLT+N+M + IG + + R V +
Sbjct: 366 --VRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNV------RDVLR---- 413
Query: 397 KIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPE 456
+P+ R++ L+ G N + E
Sbjct: 414 NVPKHVRNI--------------LVEGISLN------------------SSSEEV-VDRG 440
Query: 457 RITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFN 516
S E AL+ R + E V+ + FN
Sbjct: 441 GKRAFIGSKTECALLDFGLLLL-----RDYQEVRAEEKVVK--------------IYPFN 481
Query: 517 STRKRQSVVCRYADGRLVLYCKGADSVI-----YERLANG-----NEDLKKVTREHLEQF 566
S RK SVV +++ G+ + KGA ++ +NG ++D K + +E
Sbjct: 482 SERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPL 541
Query: 567 GSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAI 626
S LRT+CLAYRD +P+ + R + K LTLIG I
Sbjct: 542 ASDALRTICLAYRDFAPEEFPRK----------------------DYPNKGLTLIGVVGI 579
Query: 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN-----NEMKQFIITSE 681
+D L+ GV ++ RAGI + ++TGD ++TA IA C ++ E K+F
Sbjct: 580 KDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEF----- 634
Query: 682 TNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYAL 741
R V E M +
Sbjct: 635 --------------------RSLVYEE-----------------------------MDPI 645
Query: 742 DPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAH 801
P LRV+ R SPL K Q+ L+ K ++ GDG ND ++ A
Sbjct: 646 LPKLRVL-------------ARSSPLDK-QLLVLMLKDMGEVVAVTGDGTNDAPALKLAD 691
Query: 802 IG--VGISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFT 858
+G +GISG E A ASD + F + + + GR Y I K + + N+
Sbjct: 692 VGFSMGISGTE--VAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAV 749
Query: 859 LTQFWFTFQTGFS 871
+ F + + S
Sbjct: 750 ILTFVGSCISSTS 762
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 81.4 bits (201), Expect = 2e-15
Identities = 109/511 (21%), Positives = 168/511 (32%), Gaps = 121/511 (23%)
Query: 346 EELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSV 405
E LG I SDKTGTLT N M V + + +
Sbjct: 284 ETLGCTTVICSDKTGTLTTNQMS---------------------VCKVVALDPSSSSLNE 322
Query: 406 KAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAAS- 464
V + + + +E A+C+ D + + Y+
Sbjct: 323 FCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCND--SSLDFNERKGVYEKVGE 380
Query: 465 PDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSV 524
EAAL + G + + + + ++ L LEF+ RK SV
Sbjct: 381 ATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDK---FKKLATLEFSRDRKSMSV 437
Query: 525 VCRYADGRLVLYCKGADSVIYER---LANGNE--------DLKKVTREHLEQFGSSGLRT 573
+C+ + L+ KGA + ER + NG+ + E + LR
Sbjct: 438 LCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRC 496
Query: 574 LCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVA--ELIEKDLTLIGCTAIEDKLQ 631
L LA++D+ E L + A E IE DLT IG + D +
Sbjct: 497 LALAFKDIPD-----------------PREEDLLSDPANFEAIESDLTFIGVVGMLDPPR 539
Query: 632 EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEER 691
V IE AGI++ ++TGD ETA I ++ I S +
Sbjct: 540 PEVADAIEKCRTAGIRVIMITGDNKETAEAIC----------RRIGIFSPDEDVTFKSFT 589
Query: 692 GDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLN 751
G RE ++ Q L ++PS
Sbjct: 590 G--------------REFDEMGPAKQ-----------RAACRSAVLFSRVEPS------- 617
Query: 752 LSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQE 810
K+++ L+++ +I GDG ND ++ A IG+ + SG E
Sbjct: 618 ----------------HKSELVELLQE-QGEIVAMTGDGVNDAPALKKADIGIAMGSGTE 660
Query: 811 GMQAVMASDFAIAQFRFLTDLLLVH-GRWSY 840
A ASD +A F T + V GR Y
Sbjct: 661 --VAKEASDMVLADDNFATIVAAVEEGRAIY 689
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 6e-11
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 20/85 (23%)
Query: 464 SPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQS 523
P E+AL+ A+ G + +R Y + + FNS RKR S
Sbjct: 22 DPTESALLVFAEKLGID-------VEELRAR------------YPRVAEIPFNSERKRMS 62
Query: 524 VVCRYA-DGRLVLYCKGADSVIYER 547
V + D L+ KGA I ER
Sbjct: 63 TVHKLEDDDGYRLFVKGAPERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 7e-11
Identities = 73/337 (21%), Positives = 115/337 (34%), Gaps = 112/337 (33%)
Query: 346 EELGQVEYIFSDKTGTLTRNLMEFFKC----SIGGEIYGTGITEIERGVAQQTGMKI--- 398
E LG V I SDKTGTLT+N M K + + + + + +
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYT 378
Query: 399 PEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERI 458
V R ++A G ++ + RNE + T+L
Sbjct: 379 VAVSRILEA----GNLCNNAKF-----RNEAD---------------TLL---------- 404
Query: 459 TYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNST 518
+P + AL+ FG R T Y+R + V F+S
Sbjct: 405 ----GNPTDVALIELLMKFGLDDLRET----YIRVAEVP-----------------FSSE 439
Query: 519 RKRQSVVCRYADGR-LVLYCKGADSVIYE----------RLANGNEDLKKVTREHLEQFG 567
RK +V C + R + + KGA + + + + + V +E +
Sbjct: 440 RKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMA 499
Query: 568 SSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKD-LTLIGCTAI 626
S+GLR + A EK LT +G I
Sbjct: 500 SAGLRVIAFAS----------------------------------GPEKGQLTFLGLVGI 525
Query: 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIA 663
D + GV + TL G++I ++TGD ETA++IA
Sbjct: 526 NDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA 562
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 1e-08
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 10/110 (9%)
Query: 759 VVCCRVSPLQKAQ-VTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMA 817
V RVSP QK Q V +L KKG I GDG ND ++ A +G+ + + A
Sbjct: 429 DVFARVSPEQKLQIVEALQKKG--HIVAMTGDGVNDAPALKKADVGIAMGAKA------A 480
Query: 818 SDFAIAQFRFLTDLLLV-HGRWSYLRICKVVLYFFYKNLTFTLTQFWFTF 866
+D + + V GR + I + + NL
Sbjct: 481 ADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIV 530
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 4e-08
Identities = 142/677 (20%), Positives = 237/677 (35%), Gaps = 131/677 (19%)
Query: 43 LSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGF 102
++L +L+ I+E ++ K + + S V++ + +I L GDI ++K
Sbjct: 91 IALNILIGFIQE-YKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDT 149
Query: 103 FPADLLFLASTNAD---------GVCYIETANL----DGETNLKIRKALERTWDYLTPEK 149
PADL + + N D + I+ A+ + +T + R L + +T +
Sbjct: 150 IPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGR 209
Query: 150 ASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQI------LLRGCSLRNTEYIIGA 203
A KG N+ + L L P + L L+ T+ + GA
Sbjct: 210 A---KGICIATALNSEIGAIAAGL-QGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGA 265
Query: 204 VIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYY 263
+ +N+ + L RKL KL + LF C+ AI AI + H
Sbjct: 266 FL-----------GLNVGTP---LHRKLSKLAVILF------CI--AIIFAIIVMAAH-- 301
Query: 264 LGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYIN 323
+F+ DK ++ I L IIP SL + +
Sbjct: 302 -------------KFDVDKEVAIYA------ICLAISIIPESLIAVLSITMAMGAANMSK 342
Query: 324 KDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLM---EFFKCSIGGEIYG 380
+++ + ++ E LG V I SDKTGT+T+ M + + G
Sbjct: 343 RNVIVRKLDAL-----------EALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISID 391
Query: 381 TGITEIERGVAQQTGMKIPEVERSVKAVHEKGF-----NFDDPRLLRGAWRNEHNPDACK 435
+G IP + +E F D L + + D
Sbjct: 392 NSDDAFNPNEGNVSG--IPRFSPYEYSHNEAADQDILKEFKD-ELKEIDLPEDIDMDLFI 448
Query: 436 EFFRCLAICH--TVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRT-------- 485
+ A+ + TV + D + + P E A+ AK F T
Sbjct: 449 KLLETAALANIATVFKD-DATDCWKAH--GDPTEIAIHVFAKKFDLPHNALTGEEDLLKS 505
Query: 486 -PTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRL-VLYCKGADSV 543
H EK G Q +E + F+S KR + + G +Y KGA
Sbjct: 506 NENDQSSLSQHNEKPGSAQ---FEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFER 562
Query: 544 IYERLA--NGNEDLKKVT---------REHLEQFGSSGLRTLCLAYRDLSPDMYERWNEK 592
I E + NG + +K ++E + GLR L A + + +++
Sbjct: 563 IIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKA--DNNDDQ 620
Query: 593 FIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLT 652
++ ++ R E DL +G I D + +E +AGI + +LT
Sbjct: 621 -LKNETLNRA----------TAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLT 669
Query: 653 GDKMETAINIAYACNLI 669
GD ETA IA +I
Sbjct: 670 GDFPETAKAIAQEVGII 686
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 7e-06
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 3/114 (2%)
Query: 553 EDLKKVTREHLEQFGSSGLRTLCLAYRD--LSPDMYERWNEKFIQAKSSLRDREQKLDEV 610
L+ +E +E+ G+ + + + + I A L + + +
Sbjct: 306 RGLELPKQEDVEEVPGKGVEATVDGGEEVRIGNPRFLELAIEPISASPDLLNEGESQGKT 365
Query: 611 AELIEKDLTLIGCTAIEDKLQEGVPACIETLARAG-IKIWVLTGDKMETAINIA 663
+ D L+G A+ D+L+ I L RAG IK+ +LTGD A +A
Sbjct: 366 VVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA 419
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 1e-05
Identities = 82/313 (26%), Positives = 121/313 (38%), Gaps = 71/313 (22%)
Query: 515 FNSTRKRQSVVCRYAD---GRLVLYCKGADSVIYER----LANGNED-LKKVTREHLE-- 564
FNST K Q + D R +L KGA I ER L +G E L + +E +
Sbjct: 456 FNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNA 515
Query: 565 --QFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIG 622
+ G G R L + L + + +F D+V + L +G
Sbjct: 516 YLELGGLGERVLGFCHLYLPDEQFPE-GFQF------------DTDDVNFPTDN-LCFVG 561
Query: 623 CTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSET 682
++ D + VP + AGIK+ ++TGD TA IA K I SE
Sbjct: 562 LISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA----------KGVGIISEG 611
Query: 683 N-AIRDVEERGD-PVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYA 740
N + D+ R + PV + R+ C+ + G L + +
Sbjct: 612 NETVEDIAARLNIPVS------QVNPRDAKACV---------VHGSDLKDMTSEQ----- 651
Query: 741 LDPSLRVILLNLSLNCSSVVCCRVSPLQK-AQVTSLVKKGARKITLSIGDGANDVSMIQA 799
LD L+ + +V R SP QK V ++GA I GDG ND ++
Sbjct: 652 LDEILK--------YHTEIVFARTSPQQKLIIVEGCQRQGA--IVAVTGDGVNDSPALKK 701
Query: 800 AHIGV--GISGQE 810
A IGV GI+G +
Sbjct: 702 ADIGVAMGIAGSD 714
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 2e-05
Identities = 42/223 (18%), Positives = 80/223 (35%), Gaps = 69/223 (30%)
Query: 43 LSLVLLVSLIKEAWEDWK---RFQ--NDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMV 97
L LVL+ +L+ EA+++++ + + T V++ + IP +L VGDIV++
Sbjct: 3 LLLVLINALL-EAYQEYRARKALKALKKLL-PPTAATVIRDGKEEEIPADELVVGDIVLL 60
Query: 98 KQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEV 157
K PAD + +G ++ + L GE+ P
Sbjct: 61 KPGDRVPADGRII-----EGSLEVDESALTGES---------------LP---------- 90
Query: 158 QCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHET---KVM 214
+ + + G + + E + V G +T K+
Sbjct: 91 ----------------------VEKSRGDTVFAGTVVLSGE-LKVIVTATGEDTELGKIA 127
Query: 215 MNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFI 257
S ++ L+R LDKL L ++ A+ +F+
Sbjct: 128 RLVEEAKSAKTPLQRLLDKLAKILV------PIVLALAILVFL 164
|
Length = 222 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-05
Identities = 42/206 (20%), Positives = 73/206 (35%), Gaps = 35/206 (16%)
Query: 494 SHVEKMGKMQDVC-YEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYE--RLAN 550
V++ ++ ++ + F+ R+R SVV L CKGA I
Sbjct: 427 EGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVR 486
Query: 551 GNEDLKKVTREHLEQ-------FGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDR 603
N ++ + L + GLR + +A + L + D
Sbjct: 487 HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAR----------EGDYQRAD- 535
Query: 604 EQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIA 663
E DL L G A D +E ++ L +G+ + +LTGD A A
Sbjct: 536 -----------ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVA---A 581
Query: 664 YACNLINNEMKQFIITSETNAIRDVE 689
C+ + + + +I S+ + D E
Sbjct: 582 KVCHEVGLDAGEVLIGSDIETLSDDE 607
|
Length = 902 |
| >gnl|CDD|100066 cd02637, R3H_PARN, R3H domain of Poly(A)-specific ribonuclease (PARN) | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 4e-05
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 600 LRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETA 659
+ + ++++ E E DL L C + KL +E GI + L +K E
Sbjct: 1 IDEVIERIEAFLESEEDDLELEPCNGFQRKLIYQT---LEQKYPKGIHVETLETEKKERL 57
Query: 660 INIA 663
I I
Sbjct: 58 IVIE 61
|
PARN is a poly(A)-specific 3' exonuclease from the RNase D family that, in Xenopus, deadenylates a specific class of maternal mRNAs which results in their translational repression. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA. Length = 65 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 5e-05
Identities = 60/305 (19%), Positives = 103/305 (33%), Gaps = 96/305 (31%)
Query: 513 LEFNSTRKRQSVVCRYADGRLVLYCKGADSVIY---------ERLANGNEDLKKVTREHL 563
+ F+ R+R SVV L CKGA + + +E K ++
Sbjct: 412 IPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMT 471
Query: 564 EQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGC 623
+ G+R + +A + +L+ E + E + L + G
Sbjct: 472 AEMNRQGIRVIAVATK-------------------TLKVGEADFTKTDE---EQLIIEGF 509
Query: 624 TAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETN 683
D +E I L + GI + VLTGD I A C + + F++ +
Sbjct: 510 LGFLDPPKESTKEAIAALFKNGINVKVLTGD---NEIVTARICQEVGIDANDFLLGA--- 563
Query: 684 AIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDP 743
D+EE D EE+ REL K
Sbjct: 564 ---DIEELSD---------EELARELRK-------------------------------- 579
Query: 744 SLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIG 803
+ R++P+QK+++ L+KK + +GDG ND ++ A +G
Sbjct: 580 --------------YHIFARLTPMQKSRIIGLLKKAGHTVGF-LGDGINDAPALRKADVG 624
Query: 804 VGISG 808
+ +
Sbjct: 625 ISVDT 629
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 3e-04
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 35/154 (22%)
Query: 513 LEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLA------NGNED--LKKVTREHL- 563
L F+ R+R SVV A G+ +L CKGA + E LA +G+ L + RE L
Sbjct: 445 LPFDFVRRRLSVVVEDAQGQHLLICKGA---VEEMLAVATHVRDGDTVRPLDEARRERLL 501
Query: 564 ---EQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTL 620
E + + G R L +A R++ ++++ + E+DL +
Sbjct: 502 ALAEAYNADGFRVLLVATREIPGG----------ESRAQYSTAD----------ERDLVI 541
Query: 621 IGCTAIEDKLQEGVPACIETLARAGIKIWVLTGD 654
G D +E I L G+ + VLTGD
Sbjct: 542 RGFLTFLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 3e-04
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 590 NEKFIQAK----SSLRDREQKLDEVAE---LIEKDLTLIGCTAIEDKLQEGVPACIETLA 642
N + + + L +R + L+ + + D L+G A+ D+L+ I L
Sbjct: 491 NARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALK 550
Query: 643 RAGIKIWVLTGDKMETAINIA 663
GIK+ +LTGD TA IA
Sbjct: 551 ALGIKVVMLTGDNRRTAEAIA 571
|
Length = 713 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 6e-04
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 784 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLL 832
T+++GDGAND+SMI+AA +G+ + + +Q +D I + LTD+L
Sbjct: 171 TVAVGDGANDLSMIKAAGLGIAFNAKPKLQQK--ADICI-NKKDLTDIL 216
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 0.001
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 590 NEKFIQAKSSLRD--REQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIK 647
NEK + D E+ + L+ + L G A+ D+L+ I+ L R GI+
Sbjct: 373 NEKLLGENGLKTDGEVEEGGGTTSVLVAVNGELAGVLALADQLKPEAKEVIQALKRRGIE 432
Query: 648 IWVLTGDKMETAINIA 663
+LTGD +TA +A
Sbjct: 433 PVMLTGDNRKTAKAVA 448
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 583 PDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLA 642
++ R + + + L + + V + DL ++G A+ D L G ++ L
Sbjct: 50 EELVRRLLLRALAGEELLEELLRAGATV--VAVLDLVVLGLIALTDPLYPGAREALKELK 107
Query: 643 RAGIKIWVLTGDKMETAINIA 663
AGIK+ +LTGD TA IA
Sbjct: 108 EAGIKLAILTGDNRLTANAIA 128
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1159 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.97 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.87 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.5 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.44 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.09 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 98.88 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.64 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.61 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.54 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.45 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.15 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.12 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.12 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.05 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.02 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.0 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 97.98 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 97.97 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 97.9 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 97.83 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.83 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 97.8 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.76 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 97.75 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 97.75 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 97.74 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.69 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.68 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 97.67 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.65 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.61 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 97.55 | |
| PLN02887 | 580 | hydrolase family protein | 97.55 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.53 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 97.5 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.43 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.42 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.42 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 97.41 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.39 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.38 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.33 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.22 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.21 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.2 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.09 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.09 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.04 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.04 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 96.81 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.78 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.7 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 96.69 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.66 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.51 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.39 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.37 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.26 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.21 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.15 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 95.98 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 95.86 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 95.81 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 95.77 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 95.65 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 95.42 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.34 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 95.34 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 95.29 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 95.14 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 94.99 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 94.93 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 94.89 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 94.7 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 94.69 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 94.45 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 94.45 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 94.41 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 94.27 | |
| PLN02811 | 220 | hydrolase | 93.85 | |
| PRK06769 | 173 | hypothetical protein; Validated | 93.78 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 93.76 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 93.64 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 93.49 | |
| PLN02940 | 382 | riboflavin kinase | 93.26 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 93.2 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 93.18 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 93.18 | |
| PLN02580 | 384 | trehalose-phosphatase | 93.11 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 92.98 | |
| PLN03017 | 366 | trehalose-phosphatase | 92.67 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 92.66 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 92.59 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 92.48 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 92.46 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 92.37 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 92.37 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 91.22 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 91.07 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 91.03 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 90.8 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 90.56 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 90.32 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 90.26 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 90.2 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 90.09 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 89.06 | |
| PLN02423 | 245 | phosphomannomutase | 87.95 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 87.66 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 87.44 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 86.2 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 85.92 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 85.18 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 85.02 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 83.37 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 81.4 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 81.38 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 80.9 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-222 Score=2021.21 Aligned_cols=1038 Identities=53% Similarity=0.897 Sum_probs=957.8
Q ss_pred ccccccHHHhh--hhhhHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhccceEEEeeCC
Q 001087 2 FLPFYQKGCLN--RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQ 79 (1159)
Q Consensus 2 ~~tFlpk~L~~--~~~~n~yfl~i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~~~~~V~r~g 79 (1159)
++|||||+||| +|+||+|||++++||++|++|++++++++||++|+.++++||++||++||++|+++|+++++|++++
T Consensus 44 ~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~vl~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~ 123 (1151)
T KOG0206|consen 44 LFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFVLGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGD 123 (1151)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeeeehHHHHHHHHhhhhhhhccHHhhcceeEEecCC
Confidence 68999999999 9999999999999999999999999999999999999999999999999999999999999999964
Q ss_pred e-EEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEE
Q 001087 80 R-WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQ 158 (1159)
Q Consensus 80 ~-~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~ 158 (1159)
. +++..|++|+|||+|++.++|.+|||++||+||+++|.|||||+|||||||+|.|++++.+....+.+.+.+++|.|+
T Consensus 124 ~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~ 203 (1151)
T KOG0206|consen 124 GCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIE 203 (1151)
T ss_pred ceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceeeehhhhhcccccccccccCCceE
Confidence 3 999999999999999999999999999999999999999999999999999999999999988556677889999999
Q ss_pred ecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccCCCCCCcCHHHHHHHHHHHHH
Q 001087 159 CEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILAL 238 (1159)
Q Consensus 159 ~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~~~~~k~s~l~~~~n~~~~~l 238 (1159)
||+||+++|.|.|++..+++..|++++|+++|||+||||.|++|+|++||+|||+|+|+..+|.|+|+++|.+|+.+..+
T Consensus 204 cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~ 283 (1151)
T KOG0206|consen 204 CEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILL 283 (1151)
T ss_pred EcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHhcCCCccccchhhhhhhhhHHHH
Confidence 99999999999999998877679999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccc------cccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHH
Q 001087 239 FATLTVMCLICAIGSAIFIDKK------HYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIET 312 (1159)
Q Consensus 239 ~~~~~~l~~i~~i~~~~~~~~~------~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~ 312 (1159)
+++++++|++++++..+|...+ .||+... +....++..|++++++|+++||+|||+++|+
T Consensus 284 ~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~f~t~~il~~~liPISLyvsiEi 349 (1151)
T KOG0206|consen 284 FVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPS--------------EAAYAGFVHFLTFIILYQYLIPISLYVSIEI 349 (1151)
T ss_pred HHHHHHHHHHHHhhhheeeeecccccCchhhhcCc--------------hHHHHHHHHHHHHHhhhhceEEEEEEEEeee
Confidence 9999999999999999987632 4555321 1335677899999999999999999999999
Q ss_pred HHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhh
Q 001087 313 IKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQ 392 (1159)
Q Consensus 313 ~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~ 392 (1159)
++++| +.+|++|.+||++++++++.+|+++++|+||||+||+||||||||+|.|+|++|+|+|..|+...++.+....+
T Consensus 350 ik~~q-s~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~ 428 (1151)
T KOG0206|consen 350 VKVLQ-SIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAK 428 (1151)
T ss_pred hHHHH-HHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCc
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999988776555444
Q ss_pred ccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHH
Q 001087 393 QTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVT 472 (1159)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~ 472 (1159)
+.+.. . .....+++.|.++.++++.+...+++..+.+|++++|+||+++|+.+++++++.|+|+||||.|||+
T Consensus 429 ~~~~~-~------~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~ 501 (1151)
T KOG0206|consen 429 RSGGD-V------NEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVE 501 (1151)
T ss_pred ccccc-c------cccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHH
Confidence 32221 0 0122467889999999999998889999999999999999999999766669999999999999999
Q ss_pred HHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCC
Q 001087 473 AAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGN 552 (1159)
Q Consensus 473 ~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~ 552 (1159)
+|+++|+.|..|+++.++++..+ .+.+|++|+++||+|+|||||||||+|+|+++|||||||++|++||+.++
T Consensus 502 aAr~~gf~f~~Rt~~~vti~~~g-------~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~ 574 (1151)
T KOG0206|consen 502 AARELGFVFLGRTPDSVTIRELG-------VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNG 574 (1151)
T ss_pred HHHhcCceeeeccCceEEEeccc-------cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcc
Confidence 99999999999999999998432 35799999999999999999999999999999999999999999999888
Q ss_pred hhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccC
Q 001087 553 EDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQE 632 (1159)
Q Consensus 553 ~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~ 632 (1159)
....+.+.+|+++||.+||||||+|||+++++||.+|+++|++|++++.||++++++++++||+||+|+|+|||||+||+
T Consensus 575 ~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQd 654 (1151)
T KOG0206|consen 575 EKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQD 654 (1151)
T ss_pred hHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhcc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHH
Q 001087 633 GVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKC 712 (1159)
Q Consensus 633 ~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (1159)
||||||+.|++||||+|||||||+|||+|||++|+|++++|+++.++..+.+ ..++..+.. ...+.+..+..+.
T Consensus 655 gVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~-----~~~~~~~~~-~~~~~l~~~~~~~ 728 (1151)
T KOG0206|consen 655 GVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSE-----ELSSLDATA-ALKETLLRKFTEE 728 (1151)
T ss_pred CchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChh-----hhcchhhHH-HHHHHHHHhhhHH
Confidence 9999999999999999999999999999999999999999999999987754 111122222 3445555554444
Q ss_pred HHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCcc
Q 001087 713 IDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGAN 792 (1159)
Q Consensus 713 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~N 792 (1159)
...... ......++|||||++|.++++++.+..|+++|..|++|||||+||.|||+||+++|+..|.+|||||||||
T Consensus 729 ~~~~~~---~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGAN 805 (1151)
T KOG0206|consen 729 LEEAKL---EHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGAN 805 (1151)
T ss_pred HHHHhh---ccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCc
Confidence 333322 11114799999999999999999999999999999999999999999999999998899999999999999
Q ss_pred CHHHHHhcccceeecCccchhhhhccceeeccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 001087 793 DVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSG 872 (1159)
Q Consensus 793 Dv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~lll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg 872 (1159)
||+|||+|||||||+|+||+||+++|||+|+||+||.+|||+||||+|.|++++++|+||||+++++++|||.+++||||
T Consensus 806 DVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSg 885 (1151)
T KOG0206|consen 806 DVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSG 885 (1151)
T ss_pred cchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hcc
Q 001087 873 QRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSS 951 (1159)
Q Consensus 873 ~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~ 951 (1159)
|++|++|++.+||++||++|++++|+||||++++.++++|+||+.|+++..|+|++|+.|+++|++||+++||+++ .+.
T Consensus 886 q~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~ 965 (1151)
T KOG0206|consen 886 QTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFE 965 (1151)
T ss_pred CccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhhe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 666
Q ss_pred CCccCCCCcccccccchhHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeee
Q 001087 952 ATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFV 1031 (1159)
Q Consensus 952 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1159)
......+|++.|+|.+|+++||++|+++++++++++++|||++|+++|||+++||++.++|...+|.++.+.+.++.+.+
T Consensus 966 ~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~ 1045 (1151)
T KOG0206|consen 966 EQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEH 1045 (1151)
T ss_pred eeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHH
Confidence 56788899999999999999999999999999999999999999999999999999999998755555443244444445
Q ss_pred eccchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHhhc
Q 001087 1032 LMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHRH 1077 (1159)
Q Consensus 1032 ~~~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~~p~~~~~~~~~~~~ 1077 (1159)
.+++|.||+++++++++|++|+++++++++.++|++++++||+++.
T Consensus 1046 ~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~~ 1091 (1151)
T KOG0206|consen 1046 LLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEKY 1091 (1151)
T ss_pred HhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHhc
Confidence 5599999999999999999999999999999999999999999973
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-193 Score=1833.46 Aligned_cols=1036 Identities=36% Similarity=0.624 Sum_probs=886.5
Q ss_pred ccccccHHHhh--hhhhHHHHHHHHHHhhcc-cccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhccceEEEeeC
Q 001087 2 FLPFYQKGCLN--RRVANCYFLMISILSTTP-MSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQG 78 (1159)
Q Consensus 2 ~~tFlpk~L~~--~~~~n~yfl~i~il~~i~-~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~~~~~V~r~ 78 (1159)
+||||||+||| +|++|+|||+++|+|++| +++++++++++||++|++++++||++||++|+++|+++|+++++|+++
T Consensus 99 ~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~~ 178 (1178)
T PLN03190 99 VFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVD 178 (1178)
T ss_pred cHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCcEEEEEEC
Confidence 68999999999 999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEE
Q 001087 79 QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQ 158 (1159)
Q Consensus 79 g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~ 158 (1159)
|++++++|++|+|||||+|++||.||||++||+|++++|.||||||+|||||+||.|++.+.+... ..+..+++|.|+
T Consensus 179 ~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~ 256 (1178)
T PLN03190 179 DQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSK--IPEKEKINGLIK 256 (1178)
T ss_pred CeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccchhhhc--chhhhhceEEEE
Confidence 999999999999999999999999999999999999999999999999999999999998766422 123356899999
Q ss_pred ecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccCCCCCCcCHHHHHHHHHHHHH
Q 001087 159 CEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILAL 238 (1159)
Q Consensus 159 ~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~~~~~k~s~l~~~~n~~~~~l 238 (1159)
||.||+++|.|.|++.++|+..|++++|+++|||.||||+|++|+|+|||+|||+|+|..+++.|+|++|+++|+++.++
T Consensus 257 ~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l 336 (1178)
T PLN03190 257 CEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLNNSGAPSKRSRLETRMNLEIIIL 336 (1178)
T ss_pred EeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhcCCCCCCCccHHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcc---ccccccccCCCCCcc--CCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHH
Q 001087 239 FATLTVMCLICAIGSAIFIDK---KHYYLGLHNMGNSVE--DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETI 313 (1159)
Q Consensus 239 ~~~~~~l~~i~~i~~~~~~~~---~~wy~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~ 313 (1159)
+++++++|++++++..+|... ..||+.+........ ...++........+..|++++++++++||+||+|++|++
T Consensus 337 ~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleiv 416 (1178)
T PLN03190 337 SLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELV 416 (1178)
T ss_pred HHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHH
Confidence 999999999998887776432 245543221000000 000000011123456788899999999999999999999
Q ss_pred HHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhc
Q 001087 314 KFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQ 393 (1159)
Q Consensus 314 ~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~ 393 (1159)
|++| +++|++|.+||+++.++++.||+++++||||||+|||||||||||+|+|+|++|+++|..|+.+....+......
T Consensus 417 k~~q-a~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~ 495 (1178)
T PLN03190 417 RVGQ-AYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGY 495 (1178)
T ss_pred HHHH-HHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhcc
Confidence 9999 999999999999999999999999999999999999999999999999999999999999975322111100000
Q ss_pred cCCCCcccccchhhhccCCCCCCChhhhhcccc--CCCChhhHHHHHHHHhcccceEecccCC--C---CceEEecCChh
Q 001087 394 TGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWR--NEHNPDACKEFFRCLAICHTVLPEGDES--P---ERITYQAASPD 466 (1159)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lalCh~v~~~~~~~--~---~~~~y~~~spd 466 (1159)
....+. .. ..+......++.+...... +.+....+.+|++++|+||++.|+..++ . +.+.|+++|||
T Consensus 496 -~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPd 569 (1178)
T PLN03190 496 -SVEVDG---KI--LRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPD 569 (1178)
T ss_pred -cccccc---cc--ccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCc
Confidence 000000 00 0000001122222221111 1122345789999999999999963221 1 24679999999
Q ss_pred HHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHH
Q 001087 467 EAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYE 546 (1159)
Q Consensus 467 E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~ 546 (1159)
|.||+++|+++|+.|..|+++.+.+...+ ...+|++++++||+|+|||||||+++++|++++||||||++|++
T Consensus 570 E~ALv~~a~~~G~~l~~r~~~~i~i~~~~-------~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~ 642 (1178)
T PLN03190 570 EQALVYAAAAYGFMLIERTSGHIVIDIHG-------ERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFS 642 (1178)
T ss_pred HHHHHHHHHHCCCeEecccCCeEEEeecc-------ceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHH
Confidence 99999999999999999999999886543 35789999999999999999999999999999999999999999
Q ss_pred HhhcC-ChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEee
Q 001087 547 RLANG-NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTA 625 (1159)
Q Consensus 547 ~~~~~-~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ 625 (1159)
+|... +.+..+.+.+++++||++||||||+|||+++++|+++|.++|++|+.++.+|+++++++++++|+||+++|+++
T Consensus 643 ~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~ 722 (1178)
T PLN03190 643 VIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASA 722 (1178)
T ss_pred hhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEE
Confidence 99753 33467788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHH
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEV 705 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1159)
++|+||+||+++|+.|++|||++||||||+.+||++||++|||+++++..+.++..+.+. ..+...+.+
T Consensus 723 ~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~-----------~~~~l~~~~ 791 (1178)
T PLN03190 723 IEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKES-----------CRKSLEDAL 791 (1178)
T ss_pred EecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhh-----------HHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999888886554210 001111100
Q ss_pred HH--HHHH---HHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhcc
Q 001087 706 KR--ELNK---CIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA 780 (1159)
Q Consensus 706 ~~--~~~~---~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~ 780 (1159)
.. +... ..+.... .......+.++||||.+|.+++++++++.|.+++..|++|||||+||+||++||+++|+..
T Consensus 792 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~ 870 (1178)
T PLN03190 792 VMSKKLTTVSGISQNTGG-SSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRT 870 (1178)
T ss_pred hhhhhccccccccccccc-cccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcC
Confidence 00 0000 0000000 0112245678999999999999988999999999999999999999999999999997666
Q ss_pred CcEEEEecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 001087 781 RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLT 860 (1159)
Q Consensus 781 g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~lll~~Gr~~~~ri~~~i~~~~~kni~~~~~ 860 (1159)
+++|||||||+|||+|||+|||||||+|+||+||++||||+|.+|++|++||++||||+|+|++++++|+||||++++++
T Consensus 871 ~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~ 950 (1178)
T PLN03190 871 SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLV 950 (1178)
T ss_pred CcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHH
Q 001087 861 QFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQS 940 (1159)
Q Consensus 861 ~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s 940 (1159)
+|||+++++|||+++|++|.+++||++||++|++++|+||+|++++.+.++|+||+.++++..|+.+.||.|++.|+|||
T Consensus 951 qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs 1030 (1178)
T PLN03190 951 LFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQS 1030 (1178)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-hccCCccCCCCcccccccchhHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhccCCC
Q 001087 941 LVLYNCVT-TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1019 (1159)
Q Consensus 941 ~vif~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~~~~~~~~~~~~~~ 1019 (1159)
+++||+++ .+.... .+.+.+|+++++++++++++++++.+++|+|++++++|+|+++|+++.++|..++..
T Consensus 1031 ~iiff~~~~~~~~~~-------~~~~~~~~~~~~~~v~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~~~- 1102 (1178)
T PLN03190 1031 AVVFFVPLFAYWAST-------IDGSSIGDLWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIVIDAIPTL- 1102 (1178)
T ss_pred HHHHHHHHHHhcCCC-------cCceeEhHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcccc-
Confidence 99999988 443321 244567888999999999999999999999999999999999999998888765421
Q ss_pred CCCCceeeEeeeeccchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHhhc
Q 001087 1020 DRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQEMHRH 1077 (1159)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~~p~~~~~~~~~~~~ 1077 (1159)
..|+.++..+.+|.||+.++++++++++|+++++++++.++|.+++++||.++.
T Consensus 1103 ----~~~~~~~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~~~~ 1156 (1178)
T PLN03190 1103 ----PGYWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREAEKF 1156 (1178)
T ss_pred ----hhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 224444444578999999999999999999999999999999999999997654
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-179 Score=1729.74 Aligned_cols=1035 Identities=53% Similarity=0.882 Sum_probs=902.3
Q ss_pred ccccccHHHhh--hhhhHHHHHHHHHHhhcc-cccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhccceEEEeeC
Q 001087 2 FLPFYQKGCLN--RRVANCYFLMISILSTTP-MSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQG 78 (1159)
Q Consensus 2 ~~tFlpk~L~~--~~~~n~yfl~i~il~~i~-~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~~~~~V~r~ 78 (1159)
+|||||++||+ +|++|+|||+++++|++| ++|.+++++++||++|++++++++++||++||++|+++|+++++|+|+
T Consensus 13 ~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n~~~~~v~~~ 92 (1057)
T TIGR01652 13 VLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEG 92 (1057)
T ss_pred chhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHhCcEEEEECC
Confidence 68999999999 999999999999999999 999999999999999999999999999999999999999999999997
Q ss_pred -CeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEE
Q 001087 79 -QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEV 157 (1159)
Q Consensus 79 -g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i 157 (1159)
|++++++|+||+|||||+|++||.||||++||++++++|.|+||||+|||||+||.|++.+.+........+.+++|.|
T Consensus 93 ~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i 172 (1057)
T TIGR01652 93 HGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEI 172 (1057)
T ss_pred CCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEE
Confidence 8999999999999999999999999999999999999999999999999999999999987776555556677889999
Q ss_pred EecCCCCCcceeEEEEEEcC-ccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccCCCCCCcCHHHHHHHHHHH
Q 001087 158 QCEQPNNSLYTFTGNLIMQK-QTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLIL 236 (1159)
Q Consensus 158 ~~e~pn~~l~~f~Gt~~~~g-~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~~~~~k~s~l~~~~n~~~~ 236 (1159)
+||.||+++|.|.|++.+++ ...|++.+|+++|||.|+||+|++|+|+|||+|||+++|+..++.|+|++|+++|+++.
T Consensus 173 ~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k~s~le~~ln~~~~ 252 (1057)
T TIGR01652 173 ECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKRSRLEKELNFLII 252 (1057)
T ss_pred EEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCcccccHHHHHHhhHHH
Confidence 99999999999999999988 77899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcc---ccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHH
Q 001087 237 ALFATLTVMCLICAIGSAIFIDK---KHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETI 313 (1159)
Q Consensus 237 ~l~~~~~~l~~i~~i~~~~~~~~---~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~ 313 (1159)
+++.+++++|++++++..+|... ..||+.... +........+..++++++|++++||+|||++++++
T Consensus 253 ~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~----------~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~ 322 (1057)
T TIGR01652 253 ILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDV----------SERNAAANGFFSFLTFLILFSSLIPISLYVSLELV 322 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHheecccCCCccceecCc----------ccccchhHHHHHHHHHHHHHhhhcceeeeehHHHH
Confidence 99999999999998877666532 268875322 01112234566889999999999999999999999
Q ss_pred HHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhc
Q 001087 314 KFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQ 393 (1159)
Q Consensus 314 ~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~ 393 (1159)
+++| +.+|++|.+||+++.++++.+|+++++|+||+|+|||||||||||+|+|+|++|+++|..|+....+......+.
T Consensus 323 ~~~~-~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~ 401 (1057)
T TIGR01652 323 KSVQ-AYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRER 401 (1057)
T ss_pred HHHH-HHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhc
Confidence 9999 999999999999888899999999999999999999999999999999999999999999986543322211111
Q ss_pred cCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecc-cCCCCceEEecCChhHHHHHH
Q 001087 394 TGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEG-DESPERITYQAASPDEAALVT 472 (1159)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~-~~~~~~~~y~~~spdE~Alv~ 472 (1159)
.+...+. +... ....+...+.++.+.+....+++..+.+.+|++++++||++.++. +++++.+.|+++||||.||++
T Consensus 402 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~ 479 (1057)
T TIGR01652 402 LGSYVEN-ENSM-LVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVK 479 (1057)
T ss_pred ccccccc-cccc-cccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHH
Confidence 1100000 0000 000012345555554433323334456789999999999999976 332345889999999999999
Q ss_pred HHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCC
Q 001087 473 AAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGN 552 (1159)
Q Consensus 473 ~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~ 552 (1159)
+|+.+|+.+.+|+++++.+..... | ....|++++++||+|+|||||||+++++|++++||||||++|+++|...+
T Consensus 480 ~a~~~g~~~~~~~~~~~~~~i~~~---~--~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~ 554 (1057)
T TIGR01652 480 AARDVGFVFFERTPKSISLLIEMH---G--ETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGG 554 (1057)
T ss_pred HHHHCCCEEEEecCCceEEEEEeC---C--CEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccc
Confidence 999999999999988544322110 1 24789999999999999999999999999999999999999999998655
Q ss_pred hhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccC
Q 001087 553 EDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQE 632 (1159)
Q Consensus 553 ~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~ 632 (1159)
++..+.+.+++++|+.+|+||||+|||+++++|+++|.++|++|+.++.+|++++++.++++|+||+|+|++|+|||||+
T Consensus 555 ~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~ 634 (1057)
T TIGR01652 555 NQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQE 634 (1057)
T ss_pred hhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhh
Confidence 56678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHH
Q 001087 633 GVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKC 712 (1159)
Q Consensus 633 ~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (1159)
|||++|+.|++||||+|||||||.+||++||++|||++++++.+.+++++.+.. +...+.+.++....
T Consensus 635 ~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~------------~~~~~~i~~~~~~~ 702 (1057)
T TIGR01652 635 GVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDAT------------RSVEAAIKFGLEGT 702 (1057)
T ss_pred ccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhh------------HHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999888888876542110 00011111221111
Q ss_pred HHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCcc
Q 001087 713 IDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGAN 792 (1159)
Q Consensus 713 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~N 792 (1159)
..... ......+++++|||++|+.+++++++++|.+++..|+++||||+||+||++||+++|+..|++|+|||||+|
T Consensus 703 ~~~~~---~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~N 779 (1057)
T TIGR01652 703 SEEFN---NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGAN 779 (1057)
T ss_pred HHhhh---hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 11111 122346789999999999999988889999999999999999999999999999996555999999999999
Q ss_pred CHHHHHhcccceeecCccchhhhhccceeeccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 001087 793 DVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSG 872 (1159)
Q Consensus 793 Dv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~lll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg 872 (1159)
|+||||+||||||++|+||.||+++|||+|.+|+++.+++++|||++|+|+++++.|.||||+++++++|||.++++|||
T Consensus 780 D~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~ 859 (1057)
T TIGR01652 780 DVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSG 859 (1057)
T ss_pred cHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hcc
Q 001087 873 QRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSS 951 (1159)
Q Consensus 873 ~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~ 951 (1159)
+++|++|++++||+++|++|++++|++|+|++++++.++|++|+.++++..++.+.|+.|++.|+||++++|++.+ .+.
T Consensus 860 ~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~ 939 (1057)
T TIGR01652 860 QTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYI 939 (1057)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998888 555
Q ss_pred CCccCCCCcccccccchhHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeee
Q 001087 952 ATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFV 1031 (1159)
Q Consensus 952 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 (1159)
......+|.+.+++.+|+++|+++++++++++++.+++|+|++++++|+|+++|+++.++|...++ +. ..|+.+..
T Consensus 940 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~--~~--~~~~~~~~ 1015 (1057)
T TIGR01652 940 LGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFP--SP--AFYKAAPR 1015 (1057)
T ss_pred CCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc--cc--cHHHHHHH
Confidence 444446899999999999999999999999999999999999999999999999999888875432 11 33444444
Q ss_pred eccchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHH
Q 001087 1032 LMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQE 1073 (1159)
Q Consensus 1032 ~~~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~~p~~~~~~~~ 1073 (1159)
.+.+|.||+.++++++++++|+++++++++.|+|+.++++||
T Consensus 1016 ~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 1016 VMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred HHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhC
Confidence 448999999999999999999999999999999999999875
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-160 Score=1338.32 Aligned_cols=949 Identities=32% Similarity=0.507 Sum_probs=836.7
Q ss_pred ccccccHHHhh--hhhhHHHHHHHHHHhhcc-cccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhccceEEEeeC
Q 001087 2 FLPFYQKGCLN--RRVANCYFLMISILSTTP-MSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQG 78 (1159)
Q Consensus 2 ~~tFlpk~L~~--~~~~n~yfl~i~il~~i~-~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~~~~~V~r~ 78 (1159)
++||+|.-||+ +.+.|+|||++++.|++| +......+.+.|+.+|++++++||++||++|++.|++.|+.+.+++..
T Consensus 91 ~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Nse~y~~ltr 170 (1051)
T KOG0210|consen 91 IFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNSEKYTKLTR 170 (1051)
T ss_pred eEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhheeecc
Confidence 58999999999 999999999999999999 777888899999999999999999999999999999999999999854
Q ss_pred CeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEE
Q 001087 79 QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQ 158 (1159)
Q Consensus 79 g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~ 158 (1159)
......++++|+|||+|.+++||+||||++||.+|+..|.|+|.|..|||||++|.|-|.+.++++....++.+++ +.
T Consensus 171 ~~~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~--v~ 248 (1051)
T KOG0210|consen 171 DGTRREPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEIS--VY 248 (1051)
T ss_pred CCcccccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceeeccchhhccCCcccchheEE--Ee
Confidence 4445559999999999999999999999999999999999999999999999999999999999999888888777 89
Q ss_pred ecCCCCCcceeEEEEEEcCc--cccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccCCCCCCcCHHHHHHHHHHH
Q 001087 159 CEQPNNSLYTFTGNLIMQKQ--TLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLIL 236 (1159)
Q Consensus 159 ~e~pn~~l~~f~Gt~~~~g~--~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~~~~~k~s~l~~~~n~~~~ 236 (1159)
.|+|+++++.|.|++.+..+ ..+|+.+|.||.++.+.. +-++|+|+|||.||+-+||.+.++.|-..+|..+|-+.+
T Consensus 249 Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs-~t~~gvVvYTG~dtRsvMNts~pr~KvGllelEiN~ltK 327 (1051)
T KOG0210|consen 249 AEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVAS-GTAIGVVVYTGRDTRSVMNTSRPRSKVGLLELEINGLTK 327 (1051)
T ss_pred ccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEec-CcEEEEEEEecccHHHHhccCCcccccceeeeecccHHH
Confidence 99999999999999998654 579999999999999985 449999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHH
Q 001087 237 ALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFF 316 (1159)
Q Consensus 237 ~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~ 316 (1159)
++++++++++++....-++ ...||+ .++++++|+++.|||||.+.++++|.+
T Consensus 328 iL~~~vlvLs~vmv~~~g~---~~~wyi-------------------------~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 328 ILFCFVLVLSIVMVAMKGF---GSDWYI-------------------------YIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred HHHHHHHHHHHHHHHhhcC---CCchHH-------------------------HHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 9999999888776443332 235875 789999999999999999999999999
Q ss_pred hhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCch-hhhhhhhhccC
Q 001087 317 QSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGIT-EIERGVAQQTG 395 (1159)
Q Consensus 317 ~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~-~~~~~~~~~~~ 395 (1159)
. ++.|..|.+. .+.++|++++.||||+|+|+.+|||||||+|+|+|++++.+-..|+.+.. +.+.....-..
T Consensus 380 y-s~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~ 452 (1051)
T KOG0210|consen 380 Y-SWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYT 452 (1051)
T ss_pred H-hhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhC
Confidence 9 9999988755 67899999999999999999999999999999999999999999986532 22221111100
Q ss_pred CCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHH
Q 001087 396 MKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAK 475 (1159)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~ 475 (1159)
.. +. .+++. ....+++.+...++..+++|+||+|.|..++ +|...|||.||||.|+|++..
T Consensus 453 ~~--~~-------~~~~~---------~~~~k~~~s~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe 513 (1051)
T KOG0210|consen 453 PG--RN-------KGKGA---------LSRVKKDMSARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTE 513 (1051)
T ss_pred CC--cc-------ccccc---------chhhcCcccHHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeee
Confidence 00 00 00000 1112234455678999999999999998765 479999999999999999999
Q ss_pred HcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcC-CCcEEEEEecchhHHHHHhhcCChh
Q 001087 476 NFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYA-DGRLVLYCKGADSVIYERLANGNED 554 (1159)
Q Consensus 476 ~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~g~~~l~~KGA~~~i~~~~~~~~~~ 554 (1159)
..|..+..|+.+.+.++.+.+ ...+|+||.++||+|++|||++|||++ .|++..|.||||.+|-.....
T Consensus 514 ~VGl~L~~Rd~~~itL~~~~~------~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~---- 583 (1051)
T KOG0210|consen 514 TVGLKLAKRDRHAITLRVPLD------DELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY---- 583 (1051)
T ss_pred ecceEEeecccceEEEecCCC------cceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc----
Confidence 999999999999999987743 358999999999999999999999997 689999999999999776543
Q ss_pred hHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH-hhhcCcEEEEEeeecccccCC
Q 001087 555 LKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAE-LIEKDLTLIGCTAIEDKLQEG 633 (1159)
Q Consensus 555 ~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~-~iE~dl~llG~~~ieD~lq~~ 633 (1159)
.++.++....+|++|||||++|.|.|+++||+.|.+.|++|+.++.||+++++++.+ .+|+||+++|+||+||+||++
T Consensus 584 -NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~d 662 (1051)
T KOG0210|consen 584 -NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDD 662 (1051)
T ss_pred -chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhh
Confidence 456788889999999999999999999999999999999999999999999999988 899999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHH
Q 001087 634 VPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCI 713 (1159)
Q Consensus 634 v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (1159)
|+.+++.||+||||||||||||.|||+.||++.+|+..+..+..+..-... +....+++
T Consensus 663 Vk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr------------------~dah~eL~--- 721 (1051)
T KOG0210|consen 663 VKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSR------------------GDAHNELN--- 721 (1051)
T ss_pred hHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCc------------------hHHHHHHH---
Confidence 999999999999999999999999999999999999999888887754421 11111111
Q ss_pred HHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccC
Q 001087 714 DEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGAND 793 (1159)
Q Consensus 714 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND 793 (1159)
.. ......+|||||.+|+..+. ..+++|.++++.|.+||||||||.|||++++++|+++|+.|++||||.||
T Consensus 722 -~l------R~k~~~aLvi~G~Sl~~cl~-yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGND 793 (1051)
T KOG0210|consen 722 -NL------RRKTDCALVIDGESLEFCLK-YYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGND 793 (1051)
T ss_pred -Hh------hcCCCcEEEEcCchHHHHHH-HHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCcc
Confidence 11 12467899999999999885 67889999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccceeecCccchhhhhccceeeccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 001087 794 VSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQ 873 (1159)
Q Consensus 794 v~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~lll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~ 873 (1159)
|+|||+||+||||-|+||.||..||||+|.||+++.+||++|||.+|+|.+++-+|.+.+..++..+|..|+....|.+.
T Consensus 794 VsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V 873 (1051)
T KOG0210|consen 794 VSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPV 873 (1051)
T ss_pred chheeecccceeeecccccccchhccccHHHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hccC
Q 001087 874 RFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSA 952 (1159)
Q Consensus 874 ~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~~ 952 (1159)
++|..|.|..|..++|.+|++.+ +.|+|+++.+...||+||++-.+++.++.++|+.|++.++||+.++.++.+ .+..
T Consensus 874 ~LyqG~LmvgysT~YTmlPVFSl-v~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~ 952 (1051)
T KOG0210|consen 874 ALYQGFLMVGYSTCYTMLPVFSL-VLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDT 952 (1051)
T ss_pred HHhhhhHHHHHHHHHHHhhhhee-eecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhh
Confidence 99999999999999999999999 679999999999999999999999999999999999999999999998766 4332
Q ss_pred CccCCCCcccccccchhHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeee-
Q 001087 953 TGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFV- 1031 (1159)
Q Consensus 953 ~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1031 (1159)
+.....++.|++++++..+.+++..++|+|.....-..|++++++.+.... .++.
T Consensus 953 ----------ef~~ivaisFtaLi~tELiMVaLtv~tw~~~m~vae~lsL~~Yivsl~~l~--------------~yfd~ 1008 (1051)
T KOG0210|consen 953 ----------EFIHIVAISFTALILTELIMVALTVRTWHWLMVVAELLSLALYIVSLAFLH--------------EYFDR 1008 (1051)
T ss_pred ----------hheEeeeeeeHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH--------------hHHHH
Confidence 233566889999999999999999999999877666667666665543321 1121
Q ss_pred -eccchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHH
Q 001087 1032 -LMSTFYFYFTLILVPVLALLGDFIFQGVQRWFSPYDYQIVQ 1072 (1159)
Q Consensus 1032 -~~~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~~p~~~~~~~ 1072 (1159)
.+.+..|+.-+.++..++.+|.++.|+++|++.|+.|.+++
T Consensus 1009 ~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl~ 1050 (1051)
T KOG0210|consen 1009 YFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAKLQ 1050 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhcc
Confidence 22677777777788899999999999999999999998875
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-118 Score=1132.10 Aligned_cols=803 Identities=28% Similarity=0.392 Sum_probs=634.6
Q ss_pred ccccHHHhh-hhhhHHHHHHHHHHhhcc--ccccc-ccchhhhHHHHHHHHHHHHHHHHHHH---hhhhHhhccceEEEe
Q 001087 4 PFYQKGCLN-RRVANCYFLMISILSTTP--MSPVN-PVTNVVPLSLVLLVSLIKEAWEDWKR---FQNDMTINSTPVEVL 76 (1159)
Q Consensus 4 tFlpk~L~~-~~~~n~yfl~i~il~~i~--~s~~~-~~~~~~pl~~vl~vs~ik~~~ed~~r---~~~d~~~n~~~~~V~ 76 (1159)
+++.++|.+ ..+.+..+++.+++++.. +.+.. .+..+++ +++++++...+++++. .++.+++++.+++|+
T Consensus 69 ~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~~~~~~I~~---~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~ 145 (917)
T COG0474 69 SLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVDAIVILL---VVVINALLGFVQEYRAEKALEALKKMSSPKAKVL 145 (917)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcceeeehH---HHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE
Confidence 566677766 555555555555555443 33332 2223333 3334444445555555 566778889999999
Q ss_pred eCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceE
Q 001087 77 QGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGE 156 (1159)
Q Consensus 77 r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~ 156 (1159)
|||++++++|++|+|||||+++.||.||||++||++++. +||||+|||||+|+.|++.....
T Consensus 146 R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l----~VdEs~LTGES~pv~K~~~~~~~-------------- 207 (917)
T COG0474 146 RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL----EVDESALTGESLPVEKQALPLTK-------------- 207 (917)
T ss_pred eCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc----eEEcccccCCCcchhcccccccc--------------
Confidence 999999999999999999999999999999999999885 69999999999999999876441
Q ss_pred EEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccCCCC---CCcCHHHHHHHH
Q 001087 157 VQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIP---SKRSTLERKLDK 233 (1159)
Q Consensus 157 i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~~~~---~k~s~l~~~~n~ 233 (1159)
.|.|. .++..|++++||.++|+. +.|+|++||.+|++++++...+ .+.||+++.+++
T Consensus 208 --~~~~~-----------------~~d~~n~l~sGt~V~~G~-~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~ 267 (917)
T COG0474 208 --SDAPL-----------------GLDRDNMLFSGTTVVSGR-AKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNK 267 (917)
T ss_pred --ccccc-----------------cCCccceEEeCCEEEcce-EEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHHH
Confidence 11111 156789999999999654 9999999999999888776433 468999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHH
Q 001087 234 LILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETI 313 (1159)
Q Consensus 234 ~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~ 313 (1159)
+..+++.+.++++++.++... +.....| ...+++++++++.+||++||++++++
T Consensus 268 ~~~~l~~~~l~~~~~~~~~~~-~~~~~~~-------------------------~~~~~~~v~l~va~IPegLp~~vti~ 321 (917)
T COG0474 268 LGKFLLVLALVLGALVFVVGL-FRGGNGL-------------------------LESFLTALALAVAAVPEGLPAVVTIA 321 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhcCccH-------------------------HHHHHHHHHHHHhccccchHHHHHHH
Confidence 999999999988888776653 2211112 33899999999999999999999999
Q ss_pred HHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhc
Q 001087 314 KFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQ 393 (1159)
Q Consensus 314 ~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~ 393 (1159)
++++ +.+| +++++++|+++++|+||++++||||||||||+|+|+|++|++++. +.+.+
T Consensus 322 la~g-~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~--~~~~~--------- 379 (917)
T COG0474 322 LALG-AQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG--GKDID--------- 379 (917)
T ss_pred HHHH-HHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCC--ccccc---------
Confidence 9999 9999 789999999999999999999999999999999999999999851 00000
Q ss_pred cCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHH
Q 001087 394 TGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTA 473 (1159)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~ 473 (1159)
+ ..........+++..+++||++.+..+ + .|+.+||+|.||+++
T Consensus 380 -----------------------~--------~~~~~~~~~~~~l~~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~ 423 (917)
T COG0474 380 -----------------------D--------KDLKDSPALLRFLLAAALCNSVTPEKN-G----WYQAGDPTEGALVEF 423 (917)
T ss_pred -----------------------c--------cccccchHHHHHHHHHHhcCccccccc-C----ceecCCccHHHHHHH
Confidence 0 001112334578999999999988755 3 677899999999999
Q ss_pred HHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhc---
Q 001087 474 AKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLAN--- 550 (1159)
Q Consensus 474 a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~--- 550 (1159)
|.+.|+.+ .+ ......|++++.+||||+|||||+|++..+|+++++|||||++|+++|+.
T Consensus 424 a~~~~~~~-~~----------------~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~ 486 (917)
T COG0474 424 AEKLGFSL-DL----------------SGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGE 486 (917)
T ss_pred HHhcCCcC-CH----------------HHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCc
Confidence 99999843 10 00245678999999999999999999987888999999999999999984
Q ss_pred ---CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeec
Q 001087 551 ---GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIE 627 (1159)
Q Consensus 551 ---~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ie 627 (1159)
..++.++.+.+..++|+++|||+|++|||.+++++... .. +.+|+||+|+|+++|+
T Consensus 487 ~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~--------------------~~-~~~E~dl~~lGl~g~~ 545 (917)
T COG0474 487 LEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDD--------------------EV-DEIESDLVFLGLTGIE 545 (917)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccc--------------------hh-hhhhccceeehhhhcc
Confidence 23456788899999999999999999999776654211 11 6789999999999999
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
||||++|+++|+.|++||||+||+||||++||++||++||+..+..
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~---------------------------------- 591 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE---------------------------------- 591 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCC----------------------------------
Confidence 9999999999999999999999999999999999999999854321
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEe
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 787 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~i 787 (1159)
. +++|||.+|..+.++++.+.+. .|+ ||||+||+||++||+.+ |+.|++|+|+
T Consensus 592 ------------------~--~~vi~G~el~~l~~~el~~~~~----~~~--VfARvsP~qK~~IV~~l-q~~g~vVamt 644 (917)
T COG0474 592 ------------------S--ALVIDGAELDALSDEELAELVE----ELS--VFARVSPEQKARIVEAL-QKSGHVVAMT 644 (917)
T ss_pred ------------------c--eeEeehHHhhhcCHHHHHHHhh----hCc--EEEEcCHHHHHHHHHHH-HhCCCEEEEe
Confidence 1 6799999999999886555554 444 99999999999999999 5679999999
Q ss_pred cCCccCHHHHHhcccceeec--Cccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 788 GDGANDVSMIQAAHIGVGIS--GQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWF 864 (1159)
Q Consensus 788 GDG~NDv~mL~~AdVGIgis--g~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~ 864 (1159)
|||+||+||||+||||||+. |+|. |+.|||+++.+++|.... +++|||++|.|+++++.|.+++|+..+++++++
T Consensus 645 GDGvNDapALk~ADVGIamg~~Gtda--ak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~ 722 (917)
T COG0474 645 GDGVNDAPALKAADVGIAMGGEGTDA--AKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIY 722 (917)
T ss_pred CCCchhHHHHHhcCccEEecccHHHH--HHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999884 5776 889999999999998877 799999999999999999999999999999999
Q ss_pred HHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHH
Q 001087 865 TFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLY 944 (1159)
Q Consensus 865 ~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif 944 (1159)
.+++.+ ..+|+++|++|+|++++++|++++|++++ +.+.|.++|+ +++..+|+++.++.|++...+++.+++
T Consensus 723 ~~~~~~--~~p~~~~qll~inll~d~~pa~~L~~~~~--~~~~m~~~~~----~p~~~i~~~~~~~~~i~~~~~~~~i~~ 794 (917)
T COG0474 723 SLFNLF--FLPLTPLQLLWINLLTDSLPALALGVEDP--ESDVMKRPPR----GPEEGLFNRKIFWRFILIIGLLSAILF 794 (917)
T ss_pred HHHhcc--cccHHHHHHHHHHHHHhhhhhheeecCCC--cccccccCCC----CccccccchhHHHHHHHHHHHHHHHHH
Confidence 999776 56799999999999999999999999873 6677777776 788899999999999999999988888
Q ss_pred HHHH-hccCCc-cCCCCcccccccchhHHHHHHHHHHHHHHHHhhccc----h--hhHHHHHHHHHHHHHHHHHHHhhcc
Q 001087 945 NCVT-TSSATG-QNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTI----T--RFHYITVGGSILAWFLFVFLYTGIM 1016 (1159)
Q Consensus 945 ~~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~----~--~~~~~~i~~si~~~~~~~~~~~~~~ 1016 (1159)
++.+ ++.... ....+.........++.|+.++++..+........| . ++.+..+|+++++..++.++..+.+
T Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~ 874 (917)
T COG0474 795 ILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLP 874 (917)
T ss_pred HHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhH
Confidence 7777 332221 112221112455678888888888777755433221 1 1256667777666666655555544
Q ss_pred CCCCCCCceeeEeeeec-cchHHHHHHHHHHH
Q 001087 1017 TPNDRQENVFFVIFVLM-STFYFYFTLILVPV 1047 (1159)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~ 1047 (1159)
+. ....++.. .+...|+..+.+..
T Consensus 875 ~~-------~~~~f~~~~~~~~~~~~~~~~~~ 899 (917)
T COG0474 875 PL-------NLKIFQPTPLSLFEWLIAIAVAL 899 (917)
T ss_pred Hh-------HhhhccCCCCcHHHHHHHHHHHH
Confidence 31 11345555 44666777665553
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-112 Score=982.83 Aligned_cols=862 Identities=22% Similarity=0.265 Sum_probs=652.2
Q ss_pred HHHhh---hhhhHHHHHHH---HHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhH---hhccceEEEeeC
Q 001087 8 KGCLN---RRVANCYFLMI---SILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDM---TINSTPVEVLQG 78 (1159)
Q Consensus 8 k~L~~---~~~~n~yfl~i---~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~---~~n~~~~~V~r~ 78 (1159)
+.+|+ +++-|...+++ ++++++- .++...+.+.+++++.++...+++|+..|+.. ++-+..++|+|+
T Consensus 47 ~~~wk~vLeQF~n~Li~iLL~sA~ISfvl----~~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~ 122 (972)
T KOG0202|consen 47 ESLWKLVLEQFDNPLILILLLSAAISFVL----ADFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRS 122 (972)
T ss_pred CcHHHHHHHHHHhHHHHHHHHHHHHHHHH----HhcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEec
Confidence 45666 77777554443 3444432 12222222334445555557888898888755 455789999999
Q ss_pred CeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEE
Q 001087 79 QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQ 158 (1159)
Q Consensus 79 g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~ 158 (1159)
|+.+.++.++|+|||||.|+-||+||||++|++..+.. ||||+|||||.|+.|.+..... .+ .
T Consensus 123 gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~sl~----iDeS~LTGEs~pv~K~t~~v~~--~~-----------~ 185 (972)
T KOG0202|consen 123 GKLQHILARELVPGDIVELKVGDKIPADLRLIEAKSLR----IDESSLTGESEPVSKDTDAVPK--DE-----------N 185 (972)
T ss_pred CcccceehhccCCCCEEEEecCCccccceeEEeeeeee----eecccccCCcccccccCccccC--CC-----------C
Confidence 99999999999999999999999999999999998876 9999999999999997644221 00 0
Q ss_pred ecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhc---cCCCCCCcCHHHHHHHHHH
Q 001087 159 CEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMN---SMNIPSKRSTLERKLDKLI 235 (1159)
Q Consensus 159 ~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n---~~~~~~k~s~l~~~~n~~~ 235 (1159)
++..++....|+||.+..|+ +.|+|+.||.+|.+++. ....+..+||+|+++|.+.
T Consensus 186 ~~~~dk~NiaFsGT~V~~G~---------------------a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G 244 (972)
T KOG0202|consen 186 ADVQDKKNIAFSGTLVVAGR---------------------AKGIVIGTGLNTEIGKIFKMMQATESPKTPLQKKLDEFG 244 (972)
T ss_pred CccccceeeEeecceeecCc---------------------eeEEEEeccccchHHHHHHHHhccCCCCCcHHHHHHHHH
Confidence 11112333556666666666 99999999999966322 2334666899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHH
Q 001087 236 LALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKF 315 (1159)
Q Consensus 236 ~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~ 315 (1159)
..+.-+..++|+...+...- |++.+.. .+..|......|..++.|.+++||+|||+.+++..+
T Consensus 245 ~qLs~~is~i~v~v~~~nig------~f~~p~~-----------~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLA 307 (972)
T KOG0202|consen 245 KQLSKVISFICVGVWLLNIG------HFLDPVH-----------GGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLA 307 (972)
T ss_pred HHHHHHheehhhhHHHhhhh------hhccccc-----------cccchhchhhhhhHHHHHHHHhccCCCcchhhhhHH
Confidence 99986555555554443111 1111100 011112334578889999999999999999999999
Q ss_pred HhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccC
Q 001087 316 FQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTG 395 (1159)
Q Consensus 316 ~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 395 (1159)
++ .++| +++++++|.+..+|+||.+++||||||||||+|+|.+.++++.+..++.. ++...
T Consensus 308 LG-~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~-~~f~~------- 368 (972)
T KOG0202|consen 308 LG-TRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV-DEFNP------- 368 (972)
T ss_pred Hh-HHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc-ccccc-------
Confidence 99 9988 89999999999999999999999999999999999999999987655432 11000
Q ss_pred CCCcccccchhhhccCCCCCCChhhhhcccc--CCCChhhHHHHHHHHhcccceEecccCCCCceEEe-cCChhHHHHHH
Q 001087 396 MKIPEVERSVKAVHEKGFNFDDPRLLRGAWR--NEHNPDACKEFFRCLAICHTVLPEGDESPERITYQ-AASPDEAALVT 472 (1159)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~-~~spdE~Alv~ 472 (1159)
.+.++.+......+.... .....+.+.++....++||.+..+.++. + .|+ .|.|+|.||..
T Consensus 369 -------------tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~--~~~~~G~pTE~AL~v 432 (972)
T KOG0202|consen 369 -------------TGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-D--CYEKVGEPTEGALIV 432 (972)
T ss_pred -------------CCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-h--hHHhcCCchHHHHHH
Confidence 001111111111111001 1223456889999999999998876653 2 233 38999999999
Q ss_pred HHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCc--EEEEEecchhHHHHHhhc
Q 001087 473 AAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGR--LVLYCKGADSVIYERLAN 550 (1159)
Q Consensus 473 ~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~--~~l~~KGA~~~i~~~~~~ 550 (1159)
.|.++|+.-...+..+ -.+ .+.+ .++-.+.++...++||+|+||+|||.+.++.++ ..+|+|||+|.|++||+.
T Consensus 433 laeKm~l~~~~~~~~s--~~~-~~~c-~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~ 508 (972)
T KOG0202|consen 433 LAEKMGLPGTRSTNLS--NEE-ASAC-NRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCST 508 (972)
T ss_pred HHHHcCCCcchhhccc--ccc-cccc-hhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhc
Confidence 9999998643311000 001 1111 111234556678999999999999999987665 899999999999999954
Q ss_pred -----------CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCH---HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhc
Q 001087 551 -----------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSP---DMYERWNEKFIQAKSSLRDREQKLDEVAELIEK 616 (1159)
Q Consensus 551 -----------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~---~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~ 616 (1159)
-.+..++.+.+...+|+++|||+|++|+++.+. ++-.-| + ..-+...|.
T Consensus 509 ~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~------------~-----~s~~~~~E~ 571 (972)
T KOG0202|consen 509 YYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLN------------D-----TSNRATAES 571 (972)
T ss_pred EEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhc------------c-----ccccccccc
Confidence 123467888899999999999999999997763 111000 0 012356799
Q ss_pred CcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHH
Q 001087 617 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE 696 (1159)
Q Consensus 617 dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 696 (1159)
||+|+|++|+-||+|++|+++|+.|++|||+|.|+|||+++||.+||++.|+..++.+
T Consensus 572 ~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed---------------------- 629 (972)
T KOG0202|consen 572 DLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED---------------------- 629 (972)
T ss_pred ceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc----------------------
Confidence 9999999999999999999999999999999999999999999999999999875421
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHH
Q 001087 697 IARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLV 776 (1159)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~l 776 (1159)
--.-+.+|++++.+.++++..... +..+|+|++|.+|.+||+.|
T Consensus 630 ------------------------------~~~~~~TG~efD~ls~~~~~~~~~------~~~vFaR~~P~HK~kIVeaL 673 (972)
T KOG0202|consen 630 ------------------------------VSSMALTGSEFDDLSDEELDDAVR------RVLVFARAEPQHKLKIVEAL 673 (972)
T ss_pred ------------------------------ccccccchhhhhcCCHHHHHHHhh------cceEEEecCchhHHHHHHHH
Confidence 001257888888887777665544 35699999999999999999
Q ss_pred HhccCcEEEEecCCccCHHHHHhcccce--eecCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHH
Q 001087 777 KKGARKITLSIGDGANDVSMIQAAHIGV--GISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYK 853 (1159)
Q Consensus 777 k~~~g~~vl~iGDG~NDv~mL~~AdVGI--gisg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~k 853 (1159)
|+.|.+|+|+|||+||+||||.||||| |++|++. |++|||++|.|++|.+++ .+.+||.+|.||++++.|.+..
T Consensus 674 -q~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV--aKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSs 750 (972)
T KOG0202|consen 674 -QSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV--AKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSS 750 (972)
T ss_pred -HhcCCEEEecCCCccchhhhhhcccceeecCCccHh--hHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Confidence 789999999999999999999999999 5589999 999999999999999999 7999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccc-chhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHH
Q 001087 854 NLTFTLTQFWFTFQTGFSGQR-FYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIW 932 (1159)
Q Consensus 854 ni~~~~~~~~~~~~~~fsg~~-~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~ 932 (1159)
|+......|+...+ |.| ++++.|++|.|++++.+|+.+||+.++ ++++|+|+|+ ..+..++++..|+.+
T Consensus 751 nVgev~~I~l~aa~----~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~--D~DiM~kpPR----~~~~~iit~~l~~r~ 820 (972)
T KOG0202|consen 751 NVGEVVLIFLTAAF----GIPEPLIPVQILWINLVTDGPPATALGFEPV--DPDIMKKPPR----DSKDGIITGWLIFRY 820 (972)
T ss_pred hHHHHHHHHHHHHh----CCCCcccchhhheeeeeccCCchhhcCCCCC--ChhHHhCCCC----CCCCCeeeHHHHHHH
Confidence 99999999988887 444 489999999999999999999998766 7899999998 778889999999999
Q ss_pred HHHHHHHHHHHHHHHH-hccCC-ccCCCCcc-----------------cccccchhHHHHHHHHHHHHHHHHhhccch--
Q 001087 933 AFFSVYQSLVLYNCVT-TSSAT-GQNSSGKI-----------------FGIWDVSTMAFTCVVVTVNLRLLMMCNTIT-- 991 (1159)
Q Consensus 933 ~~~~~~~s~vif~~~~-~~~~~-~~~~~g~~-----------------~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~-- 991 (1159)
+..|+|.++...+.+. ++... +.-+--++ .......|+.++++++.-.+. ++.+++++
T Consensus 821 l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfN-aL~~~se~~s 899 (972)
T KOG0202|consen 821 LAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFN-ALNCLSENKS 899 (972)
T ss_pred HHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHH-HhhcccCCcc
Confidence 9999999877665555 33321 00000000 000122378888888887777 56666664
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 001087 992 -----RFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGVQRWFS 1064 (1159)
Q Consensus 992 -----~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~~ 1064 (1159)
.|.+.++.+++++.++..+...|+|| ++.+|+.. +++.-|++++.+....++.+.++|++.|.+.
T Consensus 900 lf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~--------l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 900 LFTMPPWSNRWLLWAIALSFVLHFLVLYVPP--------LQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred eEEecccccHHHHHHHHHHHHhhheEEEech--------hhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 36777888899999988888777754 45667777 9999999999999999999999999999875
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-108 Score=1053.69 Aligned_cols=875 Identities=19% Similarity=0.197 Sum_probs=628.2
Q ss_pred hhhhHHHHHH---HHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHh---hccceEEEeeCCeEEEeec
Q 001087 13 RRVANCYFLM---ISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMT---INSTPVEVLQGQRWVSIPW 86 (1159)
Q Consensus 13 ~~~~n~yfl~---i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~---~n~~~~~V~r~g~~~~i~~ 86 (1159)
+++.|.+.++ .++++++. ..|..+++ ++++++++++..++++++..++... +.+.+++|+|||++++|+.
T Consensus 58 ~q~~~~~~~iL~~aails~~~---~~~~~~~i-Il~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a 133 (1053)
T TIGR01523 58 HQVCNAMCMVLIIAAAISFAM---HDWIEGGV-ISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDS 133 (1053)
T ss_pred HHHhCHHHHHHHHHHHHHHHH---hhHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCH
Confidence 4555555444 44444432 34555544 5556666666689999998887544 4567899999999999999
Q ss_pred cCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCc
Q 001087 87 RKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSL 166 (1159)
Q Consensus 87 ~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l 166 (1159)
+||+|||||.|+.||.||||++|+++++. .||||+|||||.|+.|.+...... .. .+...+...
T Consensus 134 ~eLVpGDIv~L~~Gd~VPAD~rLi~~~~L----~VDES~LTGES~pV~K~~~~~~~~---~~---------~~~~~d~~n 197 (1053)
T TIGR01523 134 HDLVPGDICLLKTGDTIPADLRLIETKNF----DTDEALLTGESLPVIKDAHATFGK---EE---------DTPIGDRIN 197 (1053)
T ss_pred hhCCCCCEEEECCCCEeeccEEEEEeCce----EEEchhhcCCCCceeccccccccc---cc---------cCCcccCCC
Confidence 99999999999999999999999998765 599999999999999986431100 00 000011222
Q ss_pred ceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccC---CC-----C-C---------------
Q 001087 167 YTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSM---NI-----P-S--------------- 222 (1159)
Q Consensus 167 ~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~---~~-----~-~--------------- 222 (1159)
..|+||.+.+|+ +.|+|+.||.+|.+++... .. + .
T Consensus 198 ~lf~GT~V~~G~---------------------g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (1053)
T TIGR01523 198 LAFSSSAVTKGR---------------------AKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWIL 256 (1053)
T ss_pred ccccCceEEeee---------------------EEEEEEEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccc
Confidence 456666665555 9999999999996644332 11 0 0
Q ss_pred --------------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHH
Q 001087 223 --------------KRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFV 288 (1159)
Q Consensus 223 --------------k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1159)
.+||+|++++++..+++.+.++++++.++...+ . + ..
T Consensus 257 ~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~--~---~------------------------~~ 307 (1053)
T TIGR01523 257 KVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF--D---V------------------------DK 307 (1053)
T ss_pred cccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--h---h------------------------hH
Confidence 149999999999999888888777765543211 0 0 01
Q ss_pred HHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceE
Q 001087 289 LNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 368 (1159)
Q Consensus 289 ~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~ 368 (1159)
..++.++.+.+.+||++||++++++.+++ +++| +++++++|+++.+|+||++++||+|||||||+|+|+
T Consensus 308 ~~~~~av~l~Va~VPegLp~~vti~La~g-~~rM----------ak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~ 376 (1053)
T TIGR01523 308 EVAIYAICLAISIIPESLIAVLSITMAMG-AANM----------SKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMI 376 (1053)
T ss_pred HHHHHHHHHHHHHcccchHHHHHHHHHHH-HHHH----------HhcCCEeccchhhhhccCccEEEecCcCccccceEE
Confidence 25566789999999999999999999999 9999 889999999999999999999999999999999999
Q ss_pred EEEEEECCE-eecCCchhhhhhhhhccCC--CCcccccchhhhccCCCCCCChhhhhcc-----ccC---CCChhhHHHH
Q 001087 369 FFKCSIGGE-IYGTGITEIERGVAQQTGM--KIPEVERSVKAVHEKGFNFDDPRLLRGA-----WRN---EHNPDACKEF 437 (1159)
Q Consensus 369 ~~~~~i~~~-~y~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~ 437 (1159)
++++++++. .|......... .+..+. .......... ......+....... ..+ ........++
T Consensus 377 V~~i~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 450 (1053)
T TIGR01523 377 ARQIWIPRFGTISIDNSDDAF--NPNEGNVSGIPRFSPYEY----SHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKL 450 (1053)
T ss_pred EEEEEEcCCceEEecCCCCCC--CCcccccccccccccccc----cccccccccccccccccccccccccccccHHHHHH
Confidence 999998752 23211000000 000000 0000000000 00000000000000 000 0012345678
Q ss_pred HHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEee-cCc--------e-EEEEeccccccCccceEEE
Q 001087 438 FRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRR-TPT--------M-IYVRESHVEKMGKMQDVCY 507 (1159)
Q Consensus 438 ~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r-~~~--------~-i~i~~~~~~~~~~~~~~~~ 507 (1159)
+.+.++||++....+++.+... ..+||+|.||+.+|.+.|+..... +.+ . ..+.... .+.....|
T Consensus 451 l~~~~lcn~a~~~~~~~~~~~~-~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 525 (1053)
T TIGR01523 451 LETAALANIATVFKDDATDCWK-AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHN----EKPGSAQF 525 (1053)
T ss_pred HHHHHhccCCeeeccCCCCcee-eCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccccccccccc----cccccccc
Confidence 9999999998765432222221 358999999999999999743100 000 0 0000000 00013468
Q ss_pred EEeEeecCCCCCceEEEEEEcCCC-cEEEEEecchhHHHHHhhcC-----------ChhhHHHHHHHHHHHhhcCCeEEE
Q 001087 508 EILNVLEFNSTRKRQSVVCRYADG-RLVLYCKGADSVIYERLANG-----------NEDLKKVTREHLEQFGSSGLRTLC 575 (1159)
Q Consensus 508 ~il~~~~F~s~rkrmsviv~~~~g-~~~l~~KGA~~~i~~~~~~~-----------~~~~~~~~~~~l~~~a~~GlRtL~ 575 (1159)
++++.+||||+|||||++++++++ ++++|+|||||+|+++|+.. +++.++.+.+++++|+++|+|||+
T Consensus 526 ~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa 605 (1053)
T TIGR01523 526 EFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLA 605 (1053)
T ss_pred ceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEE
Confidence 999999999999999999997655 58999999999999999741 223467788899999999999999
Q ss_pred EEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCc
Q 001087 576 LAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDK 655 (1159)
Q Consensus 576 ~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~ 655 (1159)
+|||+++++++..+ .+. ....+| +.+|+||+|+|+++++||+|+||+++|+.|++|||+|||+|||+
T Consensus 606 ~A~r~l~~~~~~~~--~~~---~~~~~~--------~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~ 672 (1053)
T TIGR01523 606 FASKSFDKADNNDD--QLK---NETLNR--------ATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDF 672 (1053)
T ss_pred EEEEECCchhccch--hhh---ccccch--------hhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCC
Confidence 99999987654221 110 000111 45799999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEccc
Q 001087 656 METAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGK 735 (1159)
Q Consensus 656 ~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~ 735 (1159)
++||.+||++|||++++.. .. .+ ......+++|+
T Consensus 673 ~~tA~~iA~~~Gi~~~~~~---~~-~~------------------------------------------~~~~~~vitG~ 706 (1053)
T TIGR01523 673 PETAKAIAQEVGIIPPNFI---HD-RD------------------------------------------EIMDSMVMTGS 706 (1053)
T ss_pred HHHHHHHHHHcCCCCcccc---cc-cc------------------------------------------ccccceeeehH
Confidence 9999999999999865311 00 00 00123699999
Q ss_pred chhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee--cCccchh
Q 001087 736 CLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI--SGQEGMQ 813 (1159)
Q Consensus 736 ~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi--sg~e~~q 813 (1159)
+++.+.++++++... +..||||++|+||.++|+.+ |+.|++|+|+|||+||+|||++|||||++ +|+|.
T Consensus 707 ~l~~l~~~~l~~~~~------~~~V~ar~sP~~K~~iV~~l-q~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v-- 777 (1053)
T TIGR01523 707 QFDALSDEEVDDLKA------LCLVIARCAPQTKVKMIEAL-HRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV-- 777 (1053)
T ss_pred HhhhcCHHHHHHHhh------cCeEEEecCHHHHHHHHHHH-HhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHH--
Confidence 999887766654332 34699999999999999999 67799999999999999999999999965 68888
Q ss_pred hhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc--chhhHHHHHHHhhhhh
Q 001087 814 AVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQR--FYDDWFQSLYNVIFTS 890 (1159)
Q Consensus 814 A~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~--~~~~~~l~~~n~i~t~ 890 (1159)
|+++||+++.+++|.... ++.|||++|+|+++++.|.+++|+..+++.+++.++..++|.+ +++++|++|+|+++++
T Consensus 778 ak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~ 857 (1053)
T TIGR01523 778 AKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSC 857 (1053)
T ss_pred HHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHH
Confidence 999999999998887776 7999999999999999999999999999999999998887764 4789999999999999
Q ss_pred hHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hccCC--cc-CCC-----Ccc
Q 001087 891 MPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSAT--GQ-NSS-----GKI 961 (1159)
Q Consensus 891 lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~~~--~~-~~~-----g~~ 961 (1159)
+|++++|+.++ ++++|.++|+ .+...+++++.++.+++.|++.+++.+..++ .++.. +. ... +..
T Consensus 858 ~palaL~~e~~--~~~~m~~~Pr----~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1053)
T TIGR01523 858 FPAMGLGLEKA--APDLMDRLPH----DNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAG 931 (1053)
T ss_pred HHHHhhccCCC--ChhHHhcCCC----CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccccccccc
Confidence 99999998544 8899999998 4566799998888888999998877665444 21110 00 000 000
Q ss_pred -cccccchhHHHHHHHHHHHHHHHHhhcc-----ch-----------------hhHHHHHHHHHHHHHHHHHHHhhccCC
Q 001087 962 -FGIWDVSTMAFTCVVVTVNLRLLMMCNT-----IT-----------------RFHYITVGGSILAWFLFVFLYTGIMTP 1018 (1159)
Q Consensus 962 -~~~~~~~~~~~~~~v~~~~~~~~l~~~~-----~~-----------------~~~~~~i~~si~~~~~~~~~~~~~~~~ 1018 (1159)
.+.....|+.|+++++...++. +.+++ |+ .+.+..++.++++.+++.++..++|+
T Consensus 932 ~~~~~~a~t~~f~~l~~~~~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~- 1009 (1053)
T TIGR01523 932 CNDVFKARSAAFATMTFCALILA-VEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPV- 1009 (1053)
T ss_pred ccchhhhHHHHHHHHHHHHHHHH-HHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhh-
Confidence 1234457888888888777764 33332 21 13566777777777777766666653
Q ss_pred CCCCCceeeE-eeeec-cchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001087 1019 NDRQENVFFV-IFVLM-STFYFYFTLILVPVLALLGDFIFQGVQRWF 1063 (1159)
Q Consensus 1019 ~~~~~~~~~~-~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~ 1063 (1159)
++. +|++. .++ .|+.++.++++.++.+.++|+++|++
T Consensus 1010 -------~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 1010 -------INDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred -------hhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 343 67776 554 78888888888888999999988755
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-108 Score=1049.61 Aligned_cols=860 Identities=21% Similarity=0.225 Sum_probs=646.3
Q ss_pred hhhhHHHHHHHHHHhhcc-ccc------ccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhh---ccceEEEeeCCeEE
Q 001087 13 RRVANCYFLMISILSTTP-MSP------VNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTI---NSTPVEVLQGQRWV 82 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~-~s~------~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~---n~~~~~V~r~g~~~ 82 (1159)
+.+.++++++.++++++. +.+ ..|+..++.++ +++++++...+++++..++.+.+ .+.+++|+|||+++
T Consensus 6 ~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~-vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRdg~~~ 84 (917)
T TIGR01116 6 EDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILL-ILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDGRWS 84 (917)
T ss_pred hCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEE
Confidence 778899999999999987 332 35556655444 44455555888888888775544 46789999999999
Q ss_pred EeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCC
Q 001087 83 SIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQP 162 (1159)
Q Consensus 83 ~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p 162 (1159)
+++++||+|||||.|++||.||||++|+++++ |+||||+|||||.|+.|.+.....
T Consensus 85 ~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~-------------------- 140 (917)
T TIGR01116 85 VIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPD-------------------- 140 (917)
T ss_pred EEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCc--------------------
Confidence 99999999999999999999999999999764 579999999999999998753210
Q ss_pred CCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhh---ccCCCCCCcCHHHHHHHHHHHHHH
Q 001087 163 NNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM---NSMNIPSKRSTLERKLDKLILALF 239 (1159)
Q Consensus 163 n~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~---n~~~~~~k~s~l~~~~n~~~~~l~ 239 (1159)
....+.+.+|++++||.+.+ |++.|+|++||.+|++++ +...++.++||+|++++++...++
T Consensus 141 --------------~~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~ 205 (917)
T TIGR01116 141 --------------ERAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLS 205 (917)
T ss_pred --------------cccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHH
Confidence 00123455678888888875 679999999999997764 556677889999999999999988
Q ss_pred HHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhh
Q 001087 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQST 319 (1159)
Q Consensus 240 ~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~ 319 (1159)
.+.++++++.+++...+ |..... ....+...+..+..++++++.+||++||++++++++++ +
T Consensus 206 ~~~~~~~~i~~~~~~~~------~~~~~~-----------~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~-~ 267 (917)
T TIGR01116 206 KVIGLICILVWVINIGH------FNDPAL-----------GGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALG-T 267 (917)
T ss_pred HHHHHHHHHHHHHHHHH------hccccc-----------cchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHH-H
Confidence 88777776655443221 110000 00011122335556788999999999999999999999 9
Q ss_pred hhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCc
Q 001087 320 QYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIP 399 (1159)
Q Consensus 320 ~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~ 399 (1159)
+++ .++++++|+++.+|+||++++||||||||||+|+|++.+++..+..+... .... .
T Consensus 268 ~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~-~~~~---~-------- 325 (917)
T TIGR01116 268 RKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL-NEFC---V-------- 325 (917)
T ss_pred HHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc-ceEE---e--------
Confidence 988 77899999999999999999999999999999999999998866432100 0000 0
Q ss_pred ccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEe-cCChhHHHHHHHHHHcC
Q 001087 400 EVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQ-AASPDEAALVTAAKNFG 478 (1159)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~-~~spdE~Alv~~a~~~g 478 (1159)
...++.+.+....+.......+.....++++++++||++.+..+++.+ .|+ .+||+|.||++++++.|
T Consensus 326 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~--~~~~~gdp~E~ALl~~~~~~g 394 (917)
T TIGR01116 326 ---------TGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKG--VYEKVGEATEAALKVLVEKMG 394 (917)
T ss_pred ---------cCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCC--ceeeccChhHHHHHHHHHHcC
Confidence 000011000000000000011223466789999999998775433222 233 48999999999999999
Q ss_pred cEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhc--------
Q 001087 479 FFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLAN-------- 550 (1159)
Q Consensus 479 ~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~-------- 550 (1159)
+....+.++.+.....+.. ...+..|++++.+||||+|||||++++. ++++++|+|||||.|+++|+.
T Consensus 395 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~ 470 (917)
T TIGR01116 395 LPATKNGVSSKRRPALGCN---SVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRA 470 (917)
T ss_pred CCchhcccccccccccchh---HHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCe
Confidence 8776554444333211100 0013568899999999999999999986 477899999999999999974
Q ss_pred --CChhhHHHHHHHHHHHhh-cCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeec
Q 001087 551 --GNEDLKKVTREHLEQFGS-SGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIE 627 (1159)
Q Consensus 551 --~~~~~~~~~~~~l~~~a~-~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ie 627 (1159)
.+++..+.+.+++++|++ +|+|||++|||.+++++... . ..+ +...+.+|+||+|+|+++++
T Consensus 471 ~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~-~---------~~~-----~~~~~~~e~~l~~lGl~~~~ 535 (917)
T TIGR01116 471 VPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREED-L---------LSD-----PANFEAIESDLTFIGVVGML 535 (917)
T ss_pred eeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCcccccc-c---------ccc-----chhhhhhcCCcEEEEEeeee
Confidence 113456778889999999 99999999999997643211 0 011 11235689999999999999
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
||+|+||+++|+.|++|||++||+|||+.+||.+||++||+..++.++
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v-------------------------------- 583 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDV-------------------------------- 583 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccc--------------------------------
Confidence 999999999999999999999999999999999999999998654221
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEe
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 787 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~i 787 (1159)
...+++|+++..+.++++.. ..++.+||||++|+||.++|+.+ |..|++|+||
T Consensus 584 --------------------~~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~K~~iV~~l-q~~g~~va~i 636 (917)
T TIGR01116 584 --------------------TFKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSHKSELVELL-QEQGEIVAMT 636 (917)
T ss_pred --------------------cceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHHHHHHHHHH-HhcCCeEEEe
Confidence 12356777776655444322 23467899999999999999999 5789999999
Q ss_pred cCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 788 GDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFT 865 (1159)
Q Consensus 788 GDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~ 865 (1159)
|||+||+|||++|||||++ +|+|. |+.+||+++.+++|.... ++.|||++|+|+++++.|.+++|+..+++++++.
T Consensus 637 GDG~ND~~alk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 714 (917)
T TIGR01116 637 GDGVNDAPALKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTA 714 (917)
T ss_pred cCCcchHHHHHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 9999999999999999999 78887 889999999997776655 6899999999999999999999999999999998
Q ss_pred HhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHH
Q 001087 866 FQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYN 945 (1159)
Q Consensus 866 ~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~ 945 (1159)
++.. ..+|++++++|+|++++++|+++++.+++ ++++|.++|+ .+++++++++.++.|++.|++++++.++
T Consensus 715 ~~~~---~~pl~~~qll~inli~d~lp~~~l~~~~~--~~~~m~~pP~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~ 785 (917)
T TIGR01116 715 ALGI---PEGLIPVQLLWVNLVTDGLPATALGFNPP--DKDIMWKPPR----RPDEPLITGWLFFRYLVVGVYVGLATVG 785 (917)
T ss_pred HHcC---CchHHHHHHHHHHHHHHHHHHHHHhcCCc--chhHhcCCCC----CCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 8731 24689999999999999999999998776 6899999997 5677899999999999999999988554
Q ss_pred HHH-hccCCcc-CC-----------CCcc----cccccchhHHHHHHHHHHHHHHHHhhccc--h-----hhHHHHHHHH
Q 001087 946 CVT-TSSATGQ-NS-----------SGKI----FGIWDVSTMAFTCVVVTVNLRLLMMCNTI--T-----RFHYITVGGS 1001 (1159)
Q Consensus 946 ~~~-~~~~~~~-~~-----------~g~~----~~~~~~~~~~~~~~v~~~~~~~~l~~~~~--~-----~~~~~~i~~s 1001 (1159)
.+. .+....+ .. ++.. .+.....|++|+++++...++.. .+++. + .+.+..+|++
T Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~-~~r~~~~~~~~~~~~~n~~~~~~ 864 (917)
T TIGR01116 786 GFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNAL-NALSEDQSLLRMPPWVNKWLIGA 864 (917)
T ss_pred HHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHH-HHcCCcccccccCCccCHHHHHH
Confidence 443 2211011 00 1100 01234568899999888877743 44432 1 1345667777
Q ss_pred HHHHHHHHHHHhhccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 1002 ILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGVQR 1061 (1159)
Q Consensus 1002 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~~~ 1061 (1159)
+++.++++++..++|+ ++.+|++. .++..|+.++.++++.++.+.++|+++|
T Consensus 865 ~~~~~~l~~~~~~v~~--------~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 865 ICLSMALHFLILYVPF--------LSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHHHHHHHHHHhHH--------HHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7777776666656542 35667777 8899999999999999999999998764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-107 Score=1042.95 Aligned_cols=845 Identities=19% Similarity=0.210 Sum_probs=638.3
Q ss_pred hhhhHHHHHHHHHHhhcc--cc--------cccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhcc---ceEEEeeCC
Q 001087 13 RRVANCYFLMISILSTTP--MS--------PVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINS---TPVEVLQGQ 79 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~--~s--------~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~---~~~~V~r~g 79 (1159)
..+.++.+++.++++++. +. ...|+. .++++++++++++..+++++|++++++.+++ .+++|+|||
T Consensus 71 ~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~-~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg 149 (997)
T TIGR01106 71 FGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYL-GVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDG 149 (997)
T ss_pred hcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECC
Confidence 555666666666665543 11 123333 4568888889999999999999998877664 589999999
Q ss_pred eEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEe
Q 001087 80 RWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQC 159 (1159)
Q Consensus 80 ~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~ 159 (1159)
++++|+++||+|||||.|++||.||||++|+++++ |.||||+|||||.|+.|.+.+..
T Consensus 150 ~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LTGES~pv~K~~~~~~------------------ 207 (997)
T TIGR01106 150 EKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLTGESEPQTRSPEFTH------------------ 207 (997)
T ss_pred EEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccCCCCCceeccCCCcc------------------
Confidence 99999999999999999999999999999999865 46999999999999999874311
Q ss_pred cCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccC---CCCCCcCHHHHHHHHHHH
Q 001087 160 EQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSM---NIPSKRSTLERKLDKLIL 236 (1159)
Q Consensus 160 e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~---~~~~k~s~l~~~~n~~~~ 236 (1159)
..|++.+|++++||.+. .|++.|+|++||.+|+++++.. ..+.+++|+++.++++..
T Consensus 208 -------------------~~~~~~~n~l~~Gt~v~-~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~ 267 (997)
T TIGR01106 208 -------------------ENPLETRNIAFFSTNCV-EGTARGIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIH 267 (997)
T ss_pred -------------------cCccccCCeEEeccEee-eeeEEEEEEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHH
Confidence 12445566677776666 3569999999999998876654 556678999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHH
Q 001087 237 ALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFF 316 (1159)
Q Consensus 237 ~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~ 316 (1159)
.+..+.++++++.++++.+.. ..| ...+..++.+++.+||++||++++++..+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~--~~~-------------------------~~~~~~~i~v~v~~iP~~L~~~v~i~l~~ 320 (997)
T TIGR01106 268 IITGVAVFLGVSFFILSLILG--YTW-------------------------LEAVIFLIGIIVANVPEGLLATVTVCLTL 320 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCH-------------------------HHHHHHHHHHHhhcCCccchHHHHHHHHH
Confidence 988888777766555443221 111 12455667788888999999999999999
Q ss_pred hhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCC
Q 001087 317 QSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGM 396 (1159)
Q Consensus 317 ~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~ 396 (1159)
+ +.++ .++++++|+++.+|+||+|++||||||||||+|+|+|.++++++..|..+..+..
T Consensus 321 ~-~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~--------- 380 (997)
T TIGR01106 321 T-AKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQ--------- 380 (997)
T ss_pred H-HHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCC---------
Confidence 9 8888 7889999999999999999999999999999999999999999887753210000
Q ss_pred CCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCC--CceEEecCChhHHHHHHHH
Q 001087 397 KIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESP--ERITYQAASPDEAALVTAA 474 (1159)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~--~~~~y~~~spdE~Alv~~a 474 (1159)
.+.. ........+.+++++++||++.+..+.+. ..-.+..+||+|.||+++|
T Consensus 381 --------------~~~~------------~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a 434 (997)
T TIGR01106 381 --------------SGVS------------FDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCI 434 (997)
T ss_pred --------------CCcc------------CCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHH
Confidence 0000 00111234578889999999876543211 0112456899999999999
Q ss_pred HHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcC---CCcEEEEEecchhHHHHHhhc-
Q 001087 475 KNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYA---DGRLVLYCKGADSVIYERLAN- 550 (1159)
Q Consensus 475 ~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~g~~~l~~KGA~~~i~~~~~~- 550 (1159)
.+.+.... + .+..|+.+..+||+|+||||+++++.. ++++++|+|||||+|+++|+.
T Consensus 435 ~~~~~~~~----------~---------~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~ 495 (997)
T TIGR01106 435 ELCLGSVM----------E---------MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSI 495 (997)
T ss_pred HHhCCCHH----------H---------HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHH
Confidence 86543210 0 134678899999999999999988643 256899999999999999963
Q ss_pred --------CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHH-HHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEE
Q 001087 551 --------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYER-WNEKFIQAKSSLRDREQKLDEVAELIEKDLTLI 621 (1159)
Q Consensus 551 --------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~-~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~ll 621 (1159)
.+++.++.+.+++++|+++|+|||++|||+++++++.+ |.. +++ ..+.+|+||+|+
T Consensus 496 ~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~----------~~~-----~~~~~e~~L~fl 560 (997)
T TIGR01106 496 LIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQF----------DTD-----DVNFPTDNLCFV 560 (997)
T ss_pred hcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccc----------cch-----hhhccccCcEEE
Confidence 12345677888999999999999999999998765432 211 010 013458999999
Q ss_pred EEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHH
Q 001087 622 GCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFM 701 (1159)
Q Consensus 622 G~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 701 (1159)
|+++++||+|++|+++|+.|+++||++||+|||+..||.++|+++|+++++... ..+
T Consensus 561 Gli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~------~~~----------------- 617 (997)
T TIGR01106 561 GLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNET------VED----------------- 617 (997)
T ss_pred EEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccc------hhh-----------------
Confidence 999999999999999999999999999999999999999999999999765321 000
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC
Q 001087 702 REEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR 781 (1159)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g 781 (1159)
+.+++....+. ........++++|++++.+.++++ .++...|+.+||||++|+||++||+.+ |+.|
T Consensus 618 ---i~~~~~~~~~~------~~~~~~~~~vi~G~~l~~l~~~el----~~~~~~~~~~VfaR~sPeqK~~IV~~l-q~~g 683 (997)
T TIGR01106 618 ---IAARLNIPVSQ------VNPRDAKACVVHGSDLKDMTSEQL----DEILKYHTEIVFARTSPQQKLIIVEGC-QRQG 683 (997)
T ss_pred ---hhhhccccccc------cccccccceEEEhHHhhhCCHHHH----HHHHHhcCCEEEEECCHHHHHHHHHHH-HHCC
Confidence 00000000000 001122358999999999877654 445556677899999999999999999 6789
Q ss_pred cEEEEecCCccCHHHHHhccccee--ecCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 001087 782 KITLSIGDGANDVSMIQAAHIGVG--ISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFT 858 (1159)
Q Consensus 782 ~~vl~iGDG~NDv~mL~~AdVGIg--isg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~ 858 (1159)
++|+|+|||+||+|||++|||||+ ++|+|+ |+++||++|.+++|.... ++.|||++|.|+++++.|.+++|+..+
T Consensus 684 ~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v--ak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~ 761 (997)
T TIGR01106 684 AIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEI 761 (997)
T ss_pred CEEEEECCCcccHHHHhhCCcceecCCcccHH--HHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 999999999999999999999995 478999 899999999998888877 799999999999999999999999999
Q ss_pred HHHHHHHHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHH-HHH
Q 001087 859 LTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAF-FSV 937 (1159)
Q Consensus 859 ~~~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~-~~~ 937 (1159)
++.+++.++..+ .+++++|++|+|++++++|+++++..+ +++++|.++|+ ..+...+++++.++.|++ .|+
T Consensus 762 ~~~~~~~~~~~~---~pl~~~qlL~inli~d~lp~~al~~e~--~~~~~m~~~P~---~~~~~~l~~~~~~~~~~~~~g~ 833 (997)
T TIGR01106 762 TPFLIFIIANIP---LPLGTITILCIDLGTDMVPAISLAYEK--AESDIMKRQPR---NPKTDKLVNERLISMAYGQIGM 833 (997)
T ss_pred HHHHHHHHHcCc---chhHHHHHHHHHHHHHHHHHHHHhcCC--CCcccccCCCc---CCccccccCHHHHHHHHHHHHH
Confidence 999999888543 357899999999999999999999844 48899999998 224568899888877654 588
Q ss_pred HHHHHHHHHHH-hccCCc------cC-----C----CCc--ccc-----------cccchhHHHHHHHHHHHHHHHHhhc
Q 001087 938 YQSLVLYNCVT-TSSATG------QN-----S----SGK--IFG-----------IWDVSTMAFTCVVVTVNLRLLMMCN 988 (1159)
Q Consensus 938 ~~s~vif~~~~-~~~~~~------~~-----~----~g~--~~~-----------~~~~~~~~~~~~v~~~~~~~~l~~~ 988 (1159)
+++++.|+.++ .++..+ +. . ++. ..+ .+...|++|+.+++...++.. .++
T Consensus 834 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~-~~R 912 (997)
T TIGR01106 834 IQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLI-ICK 912 (997)
T ss_pred HHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHH-Hhc
Confidence 88887776655 221100 00 0 000 000 014578889998888877744 333
Q ss_pred cc--hh----hHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 989 TI--TR----FHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGVQR 1061 (1159)
Q Consensus 989 ~~--~~----~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~~~ 1061 (1159)
+. +. +.+..++.++++.+++..+..++| .++.++++. .++..|+.++.+.++.++.+.+.|+++|
T Consensus 913 ~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p--------~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r 984 (997)
T TIGR01106 913 TRRNSVFQQGMKNKILIFGLFEETALAAFLSYCP--------GMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIR 984 (997)
T ss_pred cCcccccccCCcCHHHHHHHHHHHHHHHHHHHhh--------hhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 11 345566666665555555444443 235567777 7889999999999988999999998887
Q ss_pred hh
Q 001087 1062 WF 1063 (1159)
Q Consensus 1062 ~~ 1063 (1159)
.+
T Consensus 985 ~~ 986 (997)
T TIGR01106 985 RN 986 (997)
T ss_pred hC
Confidence 64
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-108 Score=947.68 Aligned_cols=819 Identities=23% Similarity=0.262 Sum_probs=631.6
Q ss_pred HHhh--hhhhHHHHHHHHHHhhcc-c----ccccccchhhhHHHHHHHHHHHHHHHHHHHhhh----hHhhccceEEEee
Q 001087 9 GCLN--RRVANCYFLMISILSTTP-M----SPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQN----DMTINSTPVEVLQ 77 (1159)
Q Consensus 9 ~L~~--~~~~n~yfl~i~il~~i~-~----s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~----d~~~n~~~~~V~r 77 (1159)
++|| +...-+...+.|++++.. + .+.+||.....++.|+++-.+ .++.||++.++ +++..+.++.|+|
T Consensus 148 fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~V-tA~nDy~qe~QF~~L~~~k~~~k~~ViR 226 (1034)
T KOG0204|consen 148 FVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLV-TAVNDYRQELQFRKLQKEKRNIKFQVIR 226 (1034)
T ss_pred HHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEE-eecchhHHhhhhhhhhhhhhceEEEEEE
Confidence 3455 555555556666666643 2 344888877665554443322 44555555555 4555578899999
Q ss_pred CCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEE
Q 001087 78 GQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEV 157 (1159)
Q Consensus 78 ~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i 157 (1159)
||+.++|+..||+||||+.|+.||.+|||++++++++.+ ||||+|||||+++.|....
T Consensus 227 ~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~----iDESSlTGESd~v~k~~~~------------------ 284 (1034)
T KOG0204|consen 227 GGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLK----IDESSLTGESDHVQKSLDK------------------ 284 (1034)
T ss_pred CCEEEEEEEeeeeeccEEEeecCCccccceEEEecccee----EecccccCCCcceeccCCC------------------
Confidence 999999999999999999999999999999999998876 9999999999999997643
Q ss_pred EecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHH
Q 001087 158 QCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKL 234 (1159)
Q Consensus 158 ~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~ 234 (1159)
+.+.++||.+++|. +.++|+.+|.+|.. |.........+||+|-+++++
T Consensus 285 -------dPfLlSGTkv~eGs---------------------gkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~l 336 (1034)
T KOG0204|consen 285 -------DPFLLSGTKVMEGS---------------------GKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGL 336 (1034)
T ss_pred -------CCeEeecceeecCc---------------------ceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHH
Confidence 33788899998888 99999999999954 555556666789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccc-cccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHH
Q 001087 235 ILALFATLTVMCLICAIGSAIFIDKK-HYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETI 313 (1159)
Q Consensus 235 ~~~l~~~~~~l~~i~~i~~~~~~~~~-~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~ 313 (1159)
+..+..+.++++.+..++..+..-.. .+-.+. . ..-.+......++..|..++.+++.++|++||+++++.
T Consensus 337 A~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~-------~-~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLs 408 (1034)
T KOG0204|consen 337 ATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGG-------T-GTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLS 408 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhheeeecCCC-------C-CccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHH
Confidence 99888887777776665544321100 000000 0 00112222334445677788899999999999999999
Q ss_pred HHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhc
Q 001087 314 KFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQ 393 (1159)
Q Consensus 314 ~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~ 393 (1159)
.++. .++|. +.++++|.++++|++|+.+.||+|||||||.|.|++.+.++++..|..+.+. .
T Consensus 409 LAys-~kkMm----------kD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~-~------ 470 (1034)
T KOG0204|consen 409 LAYS-MKKMM----------KDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPK-S------ 470 (1034)
T ss_pred HHHH-HHHHh----------cchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcc-c------
Confidence 9999 88773 4567899999999999999999999999999999999999999887643211 0
Q ss_pred cCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHH
Q 001087 394 TGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTA 473 (1159)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~ 473 (1159)
..-.+.....++.+++...+-....++..+...-+.+||+|.||+.+
T Consensus 471 ---------------------------------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f 517 (1034)
T KOG0204|consen 471 ---------------------------------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGF 517 (1034)
T ss_pred ---------------------------------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHH
Confidence 00111223344555555444333333333333445699999999999
Q ss_pred HHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhc---
Q 001087 474 AKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLAN--- 550 (1159)
Q Consensus 474 a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~--- 550 (1159)
+.++|..|.. .+.+.++++++||||.||||+++++.++|..++|+|||.|.++.+|..
T Consensus 518 ~~~LG~~~~~-------------------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~ 578 (1034)
T KOG0204|consen 518 GLKLGMDFQD-------------------VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYID 578 (1034)
T ss_pred HHHhCcchHh-------------------hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheEC
Confidence 9999987632 245678999999999999999999998887239999999999999986
Q ss_pred -------CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHH--HHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEE
Q 001087 551 -------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPD--MYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLI 621 (1159)
Q Consensus 551 -------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~--e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~ll 621 (1159)
-+++....+++.++.||++||||+|+|||+..+. +..+|.. .+..+.||+++
T Consensus 579 ~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~-------------------~~~~~~~lt~l 639 (1034)
T KOG0204|consen 579 SNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN-------------------EELPEGGLTLL 639 (1034)
T ss_pred CCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc-------------------cccCCCCeEEE
Confidence 1234456788999999999999999999996543 1122211 14568999999
Q ss_pred EEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHH
Q 001087 622 GCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFM 701 (1159)
Q Consensus 622 G~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 701 (1159)
|++||+||.|||||++|+.|++|||+|.|+||||..||.+||.+|||++++..
T Consensus 640 aivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d--------------------------- 692 (1034)
T KOG0204|consen 640 AIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD--------------------------- 692 (1034)
T ss_pred EEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc---------------------------
Confidence 99999999999999999999999999999999999999999999999987632
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC
Q 001087 702 REEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR 781 (1159)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g 781 (1159)
-++++|+++..+.+++..+...+|. |.+|.||.+|..+|+.+ +..|
T Consensus 693 ---------------------------~~~lEG~eFr~~s~ee~~~i~pkl~------VlARSSP~DK~lLVk~L-~~~g 738 (1034)
T KOG0204|consen 693 ---------------------------FLALEGKEFRELSQEERDKIWPKLR------VLARSSPNDKHLLVKGL-IKQG 738 (1034)
T ss_pred ---------------------------cceecchhhhhcCHHHHHhhhhhhe------eeecCCCchHHHHHHHH-HhcC
Confidence 3478899998888888888888775 99999999999999999 5889
Q ss_pred cEEEEecCCccCHHHHHhcccce--eecCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 001087 782 KITLSIGDGANDVSMIQAAHIGV--GISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFT 858 (1159)
Q Consensus 782 ~~vl~iGDG~NDv~mL~~AdVGI--gisg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~ 858 (1159)
++|+.+|||.||+|||++||||. ||+|+|. |+++||++|+|++|.++. .+.+||..|.+|+|+++|.+.-|++..
T Consensus 739 ~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAl 816 (1034)
T KOG0204|consen 739 EVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVAL 816 (1034)
T ss_pred cEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEee
Confidence 99999999999999999999999 7799999 999999999999999988 899999999999999999999999999
Q ss_pred HHHHHHHHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHH
Q 001087 859 LTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVY 938 (1159)
Q Consensus 859 ~~~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~ 938 (1159)
++.|..++.. +.+++...||+|.|++++.|.+++|+.+++ ++++|+|.|. |++.++++..+|-..+.+++|
T Consensus 817 iv~fv~A~~~---~dsPLtAVQlLWVNLIMDTLgALALATepP--t~~Lm~RkP~----GR~~~LIt~tMwknil~qa~Y 887 (1034)
T KOG0204|consen 817 IVNFVSACAT---GDSPLTAVQLLWVNLIMDTLGALALATEPP--TDELMKRKPV----GRTKPLITRTMWKNILGQAVY 887 (1034)
T ss_pred hhhhhhhhhc---CCccHHHHHHHHHHHHHHHHHHHHhccCCC--ChHHhcCCCC----CCCCcchHHHHHHHHHHHHHH
Confidence 9999888775 567899999999999999999999997665 7889999999 999999999999999999999
Q ss_pred HHHHHHHHHHhccCCccCCCCccc-ccccchhHHHHHHHHHHHHHHHHhhcc------ch-hhHHHHHHHHHHHHHHHHH
Q 001087 939 QSLVLYNCVTTSSATGQNSSGKIF-GIWDVSTMAFTCVVVTVNLRLLMMCNT------IT-RFHYITVGGSILAWFLFVF 1010 (1159)
Q Consensus 939 ~s~vif~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~v~~~~~~~~l~~~~------~~-~~~~~~i~~si~~~~~~~~ 1010 (1159)
|-+++|.+.+. ....+..+|... ......|++|.++|+.+.+.-. ..+. |. .+++..+.+-+.+.++++.
T Consensus 888 Ql~vl~iL~F~-G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEi-naRki~~~NvFkgi~~N~~F~~ii~~T~v~Qv 965 (1034)
T KOG0204|consen 888 QLIVLFILNFA-GKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEI-NARKIDERNVFKGIFRNRLFCVIITITVVSQV 965 (1034)
T ss_pred HHHHHHHHHhc-chhhhccCCCCCCchhhheeeehhHHHHHHHHHHH-hhcchhHHhHHHHHhcCceEEEEeeeeeehhh
Confidence 99999988771 111111222221 1224456677777766655532 2222 21 1223333334444455554
Q ss_pred HHhhccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 1011 LYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGV 1059 (1159)
Q Consensus 1011 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~ 1059 (1159)
++..+ .+.++.+. .++..|++++++.++.++...+.|.+
T Consensus 966 iIveF----------~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 966 IIVEF----------GGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred hhhhh----------cCcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 44322 23456666 89999999999998888887777644
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-104 Score=1020.54 Aligned_cols=804 Identities=21% Similarity=0.253 Sum_probs=616.2
Q ss_pred hhhhHHHHHHHHHHhhcc--ccc--------ccccchh---hhHHHHHHHHHHHHHHHHHHHhhhhHhhccceEEEeeCC
Q 001087 13 RRVANCYFLMISILSTTP--MSP--------VNPVTNV---VPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQ 79 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~--~s~--------~~~~~~~---~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~~~~~V~r~g 79 (1159)
+.+.++++++.++++++. ..| .+|+..+ ++++++++++++++..++++.++.++..++.+++|+|||
T Consensus 95 ~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG 174 (941)
T TIGR01517 95 SDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGG 174 (941)
T ss_pred hCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECC
Confidence 677888888888888873 111 2455543 444555667777788777777776666678899999999
Q ss_pred eEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEe
Q 001087 80 RWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQC 159 (1159)
Q Consensus 80 ~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~ 159 (1159)
++++|++++|+|||||.|++||.||||++|+++++ +.||||+|||||.|+.|.+.+..
T Consensus 175 ~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~----l~VdES~LTGES~pv~K~~~~~n------------------ 232 (941)
T TIGR01517 175 QEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLS----LEIDESSITGESDPIKKGAPKDS------------------ 232 (941)
T ss_pred EEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCc----EEEEecccCCCCCcccccCCCCc------------------
Confidence 99999999999999999999999999999998644 56999999999999999864311
Q ss_pred cCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchh---hhhccCCCCCCcCHHHHHHHHHHH
Q 001087 160 EQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETK---VMMNSMNIPSKRSTLERKLDKLIL 236 (1159)
Q Consensus 160 e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk---~~~n~~~~~~k~s~l~~~~n~~~~ 236 (1159)
..|+||.+.+|. +.|+|++||.+|. ++++....+ +++|+++.++++..
T Consensus 233 -------~v~~GT~v~~G~---------------------~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~ 283 (941)
T TIGR01517 233 -------FLLSGTVVNEGS---------------------GRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAG 283 (941)
T ss_pred -------eEEeCCeEEeeE---------------------EEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHH
Confidence 457777776666 9999999999994 444554444 46799999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhh-hccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHH
Q 001087 237 ALFATLTVMCLICAIGSAIF-IDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKF 315 (1159)
Q Consensus 237 ~l~~~~~~l~~i~~i~~~~~-~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~ 315 (1159)
.+..+.++++++.++++.+. .....|.. . ..+......+...+..++.+++.+||++|+++++++..
T Consensus 284 ~~~~~~l~~~~i~~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~ 351 (941)
T TIGR01517 284 LIGKFGMGSAVLLFLVLSLRYVFRIIRGD---G---------RDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALA 351 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccc---c---------cccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHH
Confidence 88887777776665544321 00000000 0 00100112234478889999999999999999999999
Q ss_pred HhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccC
Q 001087 316 FQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTG 395 (1159)
Q Consensus 316 ~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 395 (1159)
.+ +.++ .++++++|+++.+|+||++++||||||||||+|+|++++++..+..|+...
T Consensus 352 ~~-~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~------------ 408 (941)
T TIGR01517 352 YS-MKKM----------MKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD------------ 408 (941)
T ss_pred HH-HHHH----------HhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCc------------
Confidence 98 8877 789999999999999999999999999999999999999987665443210
Q ss_pred CCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHH
Q 001087 396 MKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAK 475 (1159)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~ 475 (1159)
. . .. .+....+++...+.||+..+...++.+ ..+..+||+|.|++++++
T Consensus 409 -----------------~-------~-----~~-~~~~~~~~l~~~~~~~s~~~~~~~~~~-~~~~~g~p~e~All~~~~ 457 (941)
T TIGR01517 409 -----------------V-------L-----RN-VPKHVRNILVEGISLNSSSEEVVDRGG-KRAFIGSKTECALLGFLL 457 (941)
T ss_pred -----------------c-------c-----cc-CCHHHHHHHHHHHHhCCCCccccCCCC-ccccCCCccHHHHHHHHH
Confidence 0 0 00 011234455555556555443211111 234569999999999999
Q ss_pred HcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhc----C
Q 001087 476 NFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLAN----G 551 (1159)
Q Consensus 476 ~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~----~ 551 (1159)
+.|..... .+..|++++.+||+|+||||+++++.+++++++|+||||+.|+++|+. +
T Consensus 458 ~~~~~~~~-------------------~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~ 518 (941)
T TIGR01517 458 LLGRDYQE-------------------VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSN 518 (941)
T ss_pred HcCCCHHH-------------------HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcC
Confidence 87743200 123567888999999999999999987788999999999999999964 1
Q ss_pred Ch-----hhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeee
Q 001087 552 NE-----DLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAI 626 (1159)
Q Consensus 552 ~~-----~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~i 626 (1159)
+. +.++.+.+++++|+++|+||+++|||+++.+++..| +..|+||+|+|++++
T Consensus 519 g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~----------------------~~~e~~l~~lGli~~ 576 (941)
T TIGR01517 519 GEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK----------------------DYPNGGLTLIGVVGI 576 (941)
T ss_pred CCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc----------------------cccccCcEEEEEeec
Confidence 11 134667888999999999999999999976554322 234789999999999
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHH
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVK 706 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (1159)
+|++|++++++|+.|++||||+||+|||+++||.+||++|||.+++.
T Consensus 577 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~--------------------------------- 623 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG--------------------------------- 623 (941)
T ss_pred cCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc---------------------------------
Confidence 99999999999999999999999999999999999999999986431
Q ss_pred HHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEE
Q 001087 707 RELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLS 786 (1159)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~ 786 (1159)
.+++|+++..+.++++.+.+. +..||||++|+||.++|+.+ |+.|++|+|
T Consensus 624 -----------------------~vi~G~~~~~l~~~el~~~i~------~~~Vfar~sPe~K~~iV~~l-q~~g~vVam 673 (941)
T TIGR01517 624 -----------------------LAMEGKEFRRLVYEEMDPILP------KLRVLARSSPLDKQLLVLML-KDMGEVVAV 673 (941)
T ss_pred -----------------------eEeeHHHhhhCCHHHHHHHhc------cCeEEEECCHHHHHHHHHHH-HHCCCEEEE
Confidence 268888888777666655443 44699999999999999999 678999999
Q ss_pred ecCCccCHHHHHhcccceee--cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 787 IGDGANDVSMIQAAHIGVGI--SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFW 863 (1159)
Q Consensus 787 iGDG~NDv~mL~~AdVGIgi--sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~ 863 (1159)
||||+||+|||++|||||++ +|+|+ |+++||++|.+++|.... ++.|||++|+|+++++.|.+++|+...++.++
T Consensus 674 ~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~ 751 (941)
T TIGR01517 674 TGDGTNDAPALKLADVGFSMGISGTEV--AKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFV 751 (941)
T ss_pred ECCCCchHHHHHhCCcceecCCCccHH--HHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999966 68898 999999999998887766 78999999999999999999999999999998
Q ss_pred HHHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHH
Q 001087 864 FTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVL 943 (1159)
Q Consensus 864 ~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vi 943 (1159)
+.++.+ ..+++++|++|+|++++++|+++++...+ ++++|.++|. .+..+++++..+..|++.|++++++.
T Consensus 752 ~~~~~~---~~pl~~~qil~inl~~d~~~al~l~~e~~--~~~lm~~~P~----~~~~~li~~~~~~~i~~~~~~~~~~~ 822 (941)
T TIGR01517 752 GSCISS---TSPLTAVQLLWVNLIMDTLAALALATEPP--TEALLDRKPI----GRNAPLISRSMWKNILGQAGYQLVVT 822 (941)
T ss_pred HHHHhc---cccHHHHHHHHHHHHHHHhhHHHHccCCc--cHHHHhCCCC----CCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 888753 45689999999999999999999996544 7888989997 56677899999999999999999887
Q ss_pred HHHHH-hccCCccCC-CC-cccccccchhHHHHHHHHHHHHHHHHhhcc------c-hhhHHHHHHHHHHHHHHHHHHHh
Q 001087 944 YNCVT-TSSATGQNS-SG-KIFGIWDVSTMAFTCVVVTVNLRLLMMCNT------I-TRFHYITVGGSILAWFLFVFLYT 1013 (1159)
Q Consensus 944 f~~~~-~~~~~~~~~-~g-~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~------~-~~~~~~~i~~si~~~~~~~~~~~ 1013 (1159)
|++.+ ......... ++ .........|++|.++++...++... +++ | .++++..+|.++++.+++++++.
T Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~-~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~ 901 (941)
T TIGR01517 823 FILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEIN-ARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIV 901 (941)
T ss_pred HHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHH-HccCCcccccccccccHHHHHHHHHHHHHHHHHH
Confidence 76655 211000000 00 00012345688888888887777543 222 2 22456667776666666665544
Q ss_pred hccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 1014 GIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGV 1059 (1159)
Q Consensus 1014 ~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~ 1059 (1159)
.. .+.+|++. .++..|+.+++++++.++...+.|.+
T Consensus 902 ~~----------~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 902 EF----------GGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HH----------HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 21 23456666 78899999999988888888777765
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-99 Score=964.81 Aligned_cols=791 Identities=20% Similarity=0.216 Sum_probs=602.4
Q ss_pred HHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhh---ccceEEEeeCCeEEEeeccCcccce
Q 001087 17 NCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTI---NSTPVEVLQGQRWVSIPWRKLQVGD 93 (1159)
Q Consensus 17 n~yfl~i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~---n~~~~~V~r~g~~~~i~~~~l~vGD 93 (1159)
++.+++.++++++- ..|..+++.+ +++++.++..++++++..++.+.+ ++.+++|+|||++++|+++||+|||
T Consensus 64 ~~~L~~aa~ls~~~---g~~~~~~~i~-~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GD 139 (884)
T TIGR01522 64 ILLLIASAVISVFM---GNIDDAVSIT-LAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGD 139 (884)
T ss_pred HHHHHHHHHHHHHH---cchhhHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCC
Confidence 33344444444432 3444544433 334444555888888888776554 4678999999999999999999999
Q ss_pred EEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEE
Q 001087 94 IVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNL 173 (1159)
Q Consensus 94 IV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~ 173 (1159)
||.|++||.||||++|+++++. .||||+|||||.|+.|.+.+..... ..+..+.+...|+||.
T Consensus 140 iv~l~~Gd~IPaDg~ii~g~~l----~VDES~LTGES~pv~K~~~~~~~~~-------------~~~~~~~~n~v~~GT~ 202 (884)
T TIGR01522 140 LVCLSVGDRVPADLRIVEAVDL----SIDESNLTGETTPVSKVTAPIPAAT-------------NGDLAERSNIAFMGTL 202 (884)
T ss_pred EEEecCCCEEeeeEEEEEcCce----EEEcccccCCCcceecccccccccc-------------cccccccCceEEeCCE
Confidence 9999999999999999997654 5999999999999999986532100 0111123335566666
Q ss_pred EEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhh---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 174 IMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM---NSMNIPSKRSTLERKLDKLILALFATLTVMCLICA 250 (1159)
Q Consensus 174 ~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~---n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~ 250 (1159)
+.+|. +.++|++||.+|.+++ ........++|+++.++++..++.++.++++++.+
T Consensus 203 v~~G~---------------------~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~ 261 (884)
T TIGR01522 203 VRCGH---------------------GKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVIC 261 (884)
T ss_pred EEeee---------------------EEEEEEEecCccHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66665 9999999999996544 33455566899999999999988776655544433
Q ss_pred HHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhcccccccc
Q 001087 251 IGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYH 330 (1159)
Q Consensus 251 i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~ 330 (1159)
++.. +.. ..| ...+..++.+++.+||++||++++++..++ +.++
T Consensus 262 ~~~~-~~~-~~~-------------------------~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~-~~r~-------- 305 (884)
T TIGR01522 262 LVGW-FQG-KDW-------------------------LEMFTISVSLAVAAIPEGLPIIVTVTLALG-VLRM-------- 305 (884)
T ss_pred HHHH-Hhc-CCH-------------------------HHHHHHHHHHHHHHccchHHHHHHHHHHHH-HHHH--------
Confidence 3221 111 111 226677889999999999999999999999 8888
Q ss_pred ccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecC-CchhhhhhhhhccCCCCcccccchhhhc
Q 001087 331 AESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGT-GITEIERGVAQQTGMKIPEVERSVKAVH 409 (1159)
Q Consensus 331 ~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (1159)
+++++++|+++.+|+||++++||||||||||+|+|++.+++..+..+.. .....+ ..
T Consensus 306 --ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~----~~---------------- 363 (884)
T TIGR01522 306 --SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLN----QF---------------- 363 (884)
T ss_pred --hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccC----CC----------------
Confidence 7899999999999999999999999999999999999999876543211 000000 00
Q ss_pred cCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceE
Q 001087 410 EKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMI 489 (1159)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i 489 (1159)
..+..++ .......+....+++.+.++||++..+..+ ++ ..+||+|.|+++++++.|+..
T Consensus 364 -~~~~~~~------~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--~~---~~g~p~e~All~~~~~~~~~~-------- 423 (884)
T TIGR01522 364 -GEVIVDG------DVLHGFYTVAVSRILEAGNLCNNAKFRNEA--DT---LLGNPTDVALIELLMKFGLDD-------- 423 (884)
T ss_pred -Ccccccc------cccccccCHHHHHHHHHHhhhCCCeecCCC--CC---cCCChHHHHHHHHHHHcCcHh--------
Confidence 0000000 000011123466788899999998654322 11 137999999999999887631
Q ss_pred EEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcC-CCcEEEEEecchhHHHHHhhcC----------ChhhHHH
Q 001087 490 YVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYA-DGRLVLYCKGADSVIYERLANG----------NEDLKKV 558 (1159)
Q Consensus 490 ~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~g~~~l~~KGA~~~i~~~~~~~----------~~~~~~~ 558 (1159)
....|+.++.+||+|.||||+++++.+ ++++++|+|||||.|+++|... +++.++.
T Consensus 424 -------------~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~ 490 (884)
T TIGR01522 424 -------------LRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDV 490 (884)
T ss_pred -------------HHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHH
Confidence 123577889999999999999999864 5678999999999999999641 1234566
Q ss_pred HHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHH
Q 001087 559 TREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACI 638 (1159)
Q Consensus 559 ~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI 638 (1159)
+.+++++++.+|+|++++|||++ ++||+|+|+++++|++|+|++++|
T Consensus 491 i~~~~~~~a~~G~rvl~~A~~~~---------------------------------~~~l~~lGli~l~Dp~r~~~~~~i 537 (884)
T TIGR01522 491 IQEEAAEMASAGLRVIAFASGPE---------------------------------KGQLTFLGLVGINDPPRPGVKEAV 537 (884)
T ss_pred HHHHHHHHHhcCCEEEEEEEEcC---------------------------------CCCeEEEEEEeccCcchhHHHHHH
Confidence 78888999999999999999875 358999999999999999999999
Q ss_pred HHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhh
Q 001087 639 ETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQ 718 (1159)
Q Consensus 639 ~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 718 (1159)
+.|+++||+++|+|||+.+||.+||++|||.+....
T Consensus 538 ~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~-------------------------------------------- 573 (884)
T TIGR01522 538 TTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ-------------------------------------------- 573 (884)
T ss_pred HHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc--------------------------------------------
Confidence 999999999999999999999999999999754311
Q ss_pred hccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHH
Q 001087 719 YIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQ 798 (1159)
Q Consensus 719 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~ 798 (1159)
+++|+++..+.++++++.+. +..||||++|+||..+|+.+ |+.|++|+|||||+||+|||+
T Consensus 574 ------------~v~g~~l~~~~~~~l~~~~~------~~~Vfar~~P~~K~~iv~~l-q~~g~~v~mvGDGvND~pAl~ 634 (884)
T TIGR01522 574 ------------SVSGEKLDAMDDQQLSQIVP------KVAVFARASPEHKMKIVKAL-QKRGDVVAMTGDGVNDAPALK 634 (884)
T ss_pred ------------eeEhHHhHhCCHHHHHHHhh------cCeEEEECCHHHHHHHHHHH-HHCCCEEEEECCCcccHHHHH
Confidence 45677776665555555433 45699999999999999999 677999999999999999999
Q ss_pred hcccceee--cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 001087 799 AAHIGVGI--SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRF 875 (1159)
Q Consensus 799 ~AdVGIgi--sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~ 875 (1159)
+|||||++ +|++. |+.+||+++.++++.... ++.+||.+|+|+++++.|.++.|+...++.+++.++. ...+
T Consensus 635 ~AdVGia~g~~g~~v--a~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~p 709 (884)
T TIGR01522 635 LADIGVAMGQTGTDV--AKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMG---FPNP 709 (884)
T ss_pred hCCeeEecCCCcCHH--HHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc---CCCc
Confidence 99999988 35666 779999999999998877 7999999999999999999999999888877766663 3346
Q ss_pred hhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 001087 876 YDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQ 955 (1159)
Q Consensus 876 ~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~~~~~~~~ 955 (1159)
++++|++|+|++++.+|+++++..++ ++++|.++|+ .++.+++++..+..|++.|+++.++.++.+......
T Consensus 710 l~~~qiL~inl~~d~~~a~~l~~e~~--~~~~m~~~P~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-- 781 (884)
T TIGR01522 710 LNAMQILWINILMDGPPAQSLGVEPV--DKDVMRKPPR----PRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD-- 781 (884)
T ss_pred hhHHHHHHHHHHHHhhHHHHhccCCC--ChhHhhCCCC----CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--
Confidence 89999999999999999999997444 7899999997 677889999999999999999887766554421111
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHhhcc-----c--hhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeE
Q 001087 956 NSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNT-----I--TRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFV 1028 (1159)
Q Consensus 956 ~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~-----~--~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~ 1028 (1159)
|. ......|++|.++++...++.. .+++ | .++++..+|+++++.++++++..++|+ ...
T Consensus 782 ---~~--~~~~~~t~~f~~~v~~q~~~~~-~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~--------~~~ 847 (884)
T TIGR01522 782 ---GV--ITARDTTMTFTCFVFFDMFNAL-ACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPP--------LQS 847 (884)
T ss_pred ---Cc--chhhHHHHHHHHHHHHHHHHHH-HHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHH--------HHH
Confidence 10 1123457888888887777743 3333 2 124567788887777777766666542 345
Q ss_pred eeeec-cchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001087 1029 IFVLM-STFYFYFTLILVPVLALLGDFIFQGVQRWF 1063 (1159)
Q Consensus 1029 ~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~ 1063 (1159)
+|++. .++..|+.+++++++.++.+.++|+++|.+
T Consensus 848 ~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 848 VFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred HHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 66666 789999999999999999999999988764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-97 Score=958.23 Aligned_cols=733 Identities=19% Similarity=0.231 Sum_probs=535.5
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhc--cceEEEeeCCeEEEeeccCcccceEEEEc--cCCccCceEEEEe
Q 001087 36 PVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTIN--STPVEVLQGQRWVSIPWRKLQVGDIVMVK--QDGFFPADLLFLA 111 (1159)
Q Consensus 36 ~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n--~~~~~V~r~g~~~~i~~~~l~vGDIV~v~--~ge~iPAD~~lL~ 111 (1159)
|+.+++.+ ++++++.+...++.++..++.+++. +..++|+|||++++|+++||+|||||.|+ +|+.+|||++|++
T Consensus 193 ~~~~~~i~-~i~~~~~~~~~~~~~k~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~ 271 (1054)
T TIGR01657 193 YYYSLCIV-FMSSTSISLSVYQIRKQMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS 271 (1054)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe
Confidence 44444433 4444555557777777776666554 56899999999999999999999999999 9999999999997
Q ss_pred ecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeecc
Q 001087 112 STNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRG 191 (1159)
Q Consensus 112 ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrG 191 (1159)
|.|.||||+|||||.|+.|.+.+.... +.+. +.+ .+.+.+|++++|
T Consensus 272 -----g~~~VdES~LTGES~Pv~K~~~~~~~~--~~~~-------~~~--------------------~~~~~~~~lf~G 317 (1054)
T TIGR01657 272 -----GSCIVNESMLTGESVPVLKFPIPDNGD--DDED-------LFL--------------------YETSKKHVLFGG 317 (1054)
T ss_pred -----CcEEEecccccCCccceecccCCcccc--cccc-------ccc--------------------cccccceEEEcC
Confidence 457899999999999999988653100 0000 000 112334455555
Q ss_pred ceeec------CCcEEEEEEEeccch---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q 001087 192 CSLRN------TEYIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHY 262 (1159)
Q Consensus 192 s~l~n------t~~i~gvVv~tG~~T---k~~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~w 262 (1159)
|.+.. +|.+.|+|++||.+| ++.+....++.+.+++++.+.+++.+++.+.++.+++..+ .++..+ .
T Consensus 318 T~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~-~~~~~~-~-- 393 (1054)
T TIGR01657 318 TKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTII-ELIKDG-R-- 393 (1054)
T ss_pred CEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcC-C--
Confidence 55542 356999999999999 5555555566677899999988887766554433322211 111111 1
Q ss_pred cccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCC
Q 001087 263 YLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTS 342 (1159)
Q Consensus 263 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~ 342 (1159)
.....+++++.+++.+||++||++++++..++ +.++ ++++++||++
T Consensus 394 -----------------------~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~-~~rL----------~k~~il~~~~ 439 (1054)
T TIGR01657 394 -----------------------PLGKIILRSLDIITIVVPPALPAELSIGINNS-LARL----------KKKGIFCTSP 439 (1054)
T ss_pred -----------------------cHHHHHHHHHHHHHhhcCchHHHHHHHHHHHH-HHHH----------HHCCEEEcCc
Confidence 12237888999999999999999999999999 8888 7899999999
Q ss_pred cccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhh
Q 001087 343 NLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLR 422 (1159)
Q Consensus 343 ~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (1159)
+.+|.||+|+++|||||||||+|+|+|.+++..+...... . . .
T Consensus 440 ~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~-----~----~--------------------~-------- 482 (1054)
T TIGR01657 440 FRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFL-----K----I--------------------V-------- 482 (1054)
T ss_pred ccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccc-----c----c--------------------c--------
Confidence 9999999999999999999999999999987543210000 0 0 0
Q ss_pred ccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEe-ecCc---e--EEEEeccc
Q 001087 423 GAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYR-RTPT---M--IYVRESHV 496 (1159)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~-r~~~---~--i~i~~~~~ 496 (1159)
..........+..++++||++.... +. ..+||.|.|+++++ |+.+.. .+.. . ..+....
T Consensus 483 ----~~~~~~~~~~~~~~~a~C~~~~~~~----~~---~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~~- 547 (1054)
T TIGR01657 483 ----TEDSSLKPSITHKALATCHSLTKLE----GK---LVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTDD- 547 (1054)
T ss_pred ----ccccccCchHHHHHHHhCCeeEEEC----CE---EecCHHHHHHHHhC---CCEEECCCCcccccccccceeccC-
Confidence 0000012235667899999987542 21 35899999999974 565433 1100 0 0000000
Q ss_pred cccCccceEEEEEeEeecCCCCCceEEEEEEcCC-CcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEE
Q 001087 497 EKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD-GRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLC 575 (1159)
Q Consensus 497 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~ 575 (1159)
....|++++.+||+|+||||||+++.++ +++++|+|||||.|+++|.+.. .++++.+.+++|+++|+|||+
T Consensus 548 ------~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~--~p~~~~~~~~~~a~~G~RVLa 619 (1054)
T TIGR01657 548 ------PPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET--VPSDYQEVLKSYTREGYRVLA 619 (1054)
T ss_pred ------CCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC--CChhHHHHHHHHHhcCCEEEE
Confidence 1257999999999999999999999764 5688999999999999998642 467788899999999999999
Q ss_pred EEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCc
Q 001087 576 LAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDK 655 (1159)
Q Consensus 576 ~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~ 655 (1159)
+|||++++.++.++.+ .+ .+.+|+||+|+|+++++|++|++++++|+.|++|||++||+|||+
T Consensus 620 lA~k~l~~~~~~~~~~---------~~--------r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~ 682 (1054)
T TIGR01657 620 LAYKELPKLTLQKAQD---------LS--------RDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDN 682 (1054)
T ss_pred EEEeecCccchhhhhh---------cc--------HHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCC
Confidence 9999998543322211 12 256899999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHcCccccCceEEEEecCCcc------cchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceE
Q 001087 656 METAINIAYACNLINNEMKQFIITSETNA------IRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLA 729 (1159)
Q Consensus 656 ~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1159)
+.||.+||++|||++++..++..+..... ............ .... ........+. ........+.
T Consensus 683 ~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~----~~~~~~~~~~ 753 (1054)
T TIGR01657 683 PLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFA-STQV----EIPYPLGQDS----VEDLLASRYH 753 (1054)
T ss_pred HHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccc-cccc----cccCcccccc----hhhhcccceE
Confidence 99999999999999877555554321100 000000000000 0000 0000000000 0111224567
Q ss_pred EEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceeecCc
Q 001087 730 LIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQ 809 (1159)
Q Consensus 730 lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~ 809 (1159)
++++|+++.++.+. ..+.+.++...| .||||++|+||.++|+.+ |+.|++|+|||||+||+||||+|||||++++.
T Consensus 754 ~~itG~~l~~l~~~-~~~~l~~~~~~~--~VfAR~sP~qK~~iV~~l-q~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~ 829 (1054)
T TIGR01657 754 LAMSGKAFAVLQAH-SPELLLRLLSHT--TVFARMAPDQKETLVELL-QKLDYTVGMCGDGANDCGALKQADVGISLSEA 829 (1054)
T ss_pred EEEEcHHHHHHHHh-hHHHHHHHHhcC--eEEEecCHHHHHHHHHHH-HhCCCeEEEEeCChHHHHHHHhcCcceeeccc
Confidence 99999999886532 123455555544 499999999999999999 67899999999999999999999999999877
Q ss_pred cchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHhhh
Q 001087 810 EGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIF 888 (1159)
Q Consensus 810 e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~~~~~~l~~~n~i~ 888 (1159)
| |+.||||++.++++.... ++.+||.++.++.+++.|.+..+++..+..+...+. + ..+.++|++|.|+++
T Consensus 830 d---as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-~~l~~~Q~l~i~li~ 901 (1054)
T TIGR01657 830 E---ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLI----G-SNLGDGQFLTIDLLL 901 (1054)
T ss_pred c---ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----c-CcCccHHHHHHHHHH
Confidence 7 568999999999998877 799999999999999999999988775554433222 3 447899999999999
Q ss_pred hhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 889 TSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT 948 (1159)
Q Consensus 889 t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~ 948 (1159)
+.+|.++++..++ .++++.+.| ..+++++..+...+++++++.++.++...
T Consensus 902 ~~~~~l~l~~~~p--~~~l~~~~P-------~~~l~~~~~~~si~~q~~i~~~~~~~~~~ 952 (1054)
T TIGR01657 902 IFPVALLMSRNKP--LKKLSKERP-------PSNLFSVYILTSVLIQFVLHILSQVYLVF 952 (1054)
T ss_pred HHHHHHHHHcCCc--hhhcCCCCC-------CccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999997655 566777666 35799999999999999999988877766
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-95 Score=918.34 Aligned_cols=779 Identities=16% Similarity=0.156 Sum_probs=564.7
Q ss_pred hhhhHHHHHHHHHHhhcc--ccc------ccccchhhhHHHHHHHHHHHHHHHHHHHhhhhH---hhccceEEEeeC---
Q 001087 13 RRVANCYFLMISILSTTP--MSP------VNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDM---TINSTPVEVLQG--- 78 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~--~s~------~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~---~~n~~~~~V~r~--- 78 (1159)
..+.++.+++.++++++. +.+ .+|...+ .++++++++++.+.+++++..++.+ ++.+.+++|+|+
T Consensus 80 ~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~-iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~ 158 (903)
T PRK15122 80 NNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVI-IILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHA 158 (903)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCcc
Confidence 334444555555666543 111 2344444 4555666666779999998877644 445688999999
Q ss_pred ---CeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccce
Q 001087 79 ---QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKG 155 (1159)
Q Consensus 79 ---g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g 155 (1159)
|++++|+.++|+|||||.|++||.||||++|+++++. .||||+|||||.|+.|.+.+........... .+
T Consensus 159 ~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~l----~VDES~LTGES~PV~K~~~~~~~~~~~~~~~---~~ 231 (903)
T PRK15122 159 GAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDL----FISQAVLTGEALPVEKYDTLGAVAGKSADAL---AD 231 (903)
T ss_pred CCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCce----EEEccccCCCCcceeeecccccccccccccc---cc
Confidence 4899999999999999999999999999999997663 5999999999999999863210000000000 00
Q ss_pred EEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhcc---CCCCCCcCHHHHHHH
Q 001087 156 EVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNS---MNIPSKRSTLERKLD 232 (1159)
Q Consensus 156 ~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~---~~~~~k~s~l~~~~n 232 (1159)
. ..+..+.....|+||.+.+|+ +.++|+.||.+|.+.+.. .. +...+++++.++
T Consensus 232 ~-~~~~~~~~n~vfaGT~V~~G~---------------------~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~ 288 (903)
T PRK15122 232 D-EGSLLDLPNICFMGTNVVSGT---------------------ATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVN 288 (903)
T ss_pred c-cCCcccccceEEeCCEEEeee---------------------EEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHH
Confidence 0 000001122445555555555 999999999999664433 33 445789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHH
Q 001087 233 KLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIET 312 (1159)
Q Consensus 233 ~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~ 312 (1159)
++...+..+.++++.+..++..+... . +...+..++.+++.+||++||+++++
T Consensus 289 ~i~~~l~~~~~~~~~~v~~~~~~~~~--~-------------------------~~~~l~~aisl~V~~~Pe~Lp~~vt~ 341 (903)
T PRK15122 289 SVSWLLIRFMLVMVPVVLLINGFTKG--D-------------------------WLEALLFALAVAVGLTPEMLPMIVSS 341 (903)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhccC--C-------------------------HHHHHHHHHHHHHHHccchHHHHHHH
Confidence 99888776666555444333221110 1 12267778999999999999999999
Q ss_pred HHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhh
Q 001087 313 IKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQ 392 (1159)
Q Consensus 313 ~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~ 392 (1159)
+...+ +.++ +++++++|+.+.+|+||++|+||||||||||+|+|++.+++..+. +
T Consensus 342 ~La~g-~~~m----------ak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~-~------------- 396 (903)
T PRK15122 342 NLAKG-AIAM----------ARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSG-R------------- 396 (903)
T ss_pred HHHHH-HHHH----------HHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCC-C-------------
Confidence 99998 8877 789999999999999999999999999999999999988642110 0
Q ss_pred ccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHH
Q 001087 393 QTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVT 472 (1159)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~ 472 (1159)
.. .+++...++|.. .. . ..+||.|.|+++
T Consensus 397 -------------------------------------~~---~~~l~~a~l~s~-~~---~-------~~~~p~e~All~ 425 (903)
T PRK15122 397 -------------------------------------KD---ERVLQLAWLNSF-HQ---S-------GMKNLMDQAVVA 425 (903)
T ss_pred -------------------------------------Ch---HHHHHHHHHhCC-CC---C-------CCCChHHHHHHH
Confidence 00 123333333311 00 0 147999999999
Q ss_pred HHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcC-
Q 001087 473 AAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANG- 551 (1159)
Q Consensus 473 ~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~- 551 (1159)
+|.+.|... ....|+.+..+||+|.||||+++++.++|++++++|||++.|+++|+..
T Consensus 426 ~a~~~~~~~---------------------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~ 484 (903)
T PRK15122 426 FAEGNPEIV---------------------KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVR 484 (903)
T ss_pred HHHHcCchh---------------------hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhh
Confidence 998876421 1234667788999999999999999878889999999999999999741
Q ss_pred --------ChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEE
Q 001087 552 --------NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGC 623 (1159)
Q Consensus 552 --------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~ 623 (1159)
+++.++.+.+.+++++.+|+|++++|||+++.++..++ ..+..|+||+|+|+
T Consensus 485 ~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~--------------------~~~~~e~~l~~lGl 544 (903)
T PRK15122 485 DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQ--------------------YSTADERDLVIRGF 544 (903)
T ss_pred cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccc--------------------cccccccCcEEEEE
Confidence 22345567788899999999999999999876432110 01235789999999
Q ss_pred eeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHH
Q 001087 624 TAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMRE 703 (1159)
Q Consensus 624 ~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 703 (1159)
++++||+|++++++|+.|+++||+++|+|||++.||.+||++|||..+.
T Consensus 545 i~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~~------------------------------- 593 (903)
T PRK15122 545 LTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPGE------------------------------- 593 (903)
T ss_pred EeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-------------------------------
Confidence 9999999999999999999999999999999999999999999994211
Q ss_pred HHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcE
Q 001087 704 EVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKI 783 (1159)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~ 783 (1159)
+++|.+++.+.++++.+...+ ..||||++|+||.++|+.+ |+.|++
T Consensus 594 ---------------------------vi~G~el~~~~~~el~~~v~~------~~VfAr~sPe~K~~iV~~L-q~~G~v 639 (903)
T PRK15122 594 ---------------------------PLLGTEIEAMDDAALAREVEE------RTVFAKLTPLQKSRVLKAL-QANGHT 639 (903)
T ss_pred ---------------------------ccchHhhhhCCHHHHHHHhhh------CCEEEEeCHHHHHHHHHHH-HhCCCE
Confidence 577888887776666555443 3499999999999999999 678999
Q ss_pred EEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 784 TLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQ 861 (1159)
Q Consensus 784 vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~ 861 (1159)
|+|+|||+||+|||++|||||++ +|+|. |+++||+++.+++|.... ++.+||..|+|+++++.|.+..|+..+++.
T Consensus 640 VamtGDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~ 717 (903)
T PRK15122 640 VGFLGDGINDAPALRDADVGISVDSGADI--AKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSV 717 (903)
T ss_pred EEEECCCchhHHHHHhCCEEEEeCcccHH--HHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 99999999999999999999988 68888 999999999999998887 799999999999999999999999888877
Q ss_pred HHHHHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHH
Q 001087 862 FWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSL 941 (1159)
Q Consensus 862 ~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~ 941 (1159)
++..++. +..++.+.|++|.|++++. |.++++..++ ++++| ++|+ .++.+++++..++ ..+.+.+.++
T Consensus 718 ~~~~~~~---~~~pl~~~qil~~nli~D~-~~lal~~d~~--~~~~m-~~P~----~~~~~~~~~~~~~-~g~~~~~~~~ 785 (903)
T PRK15122 718 LVASAFI---PFLPMLAIHLLLQNLMYDI-SQLSLPWDKM--DKEFL-RKPR----KWDAKNIGRFMLW-IGPTSSIFDI 785 (903)
T ss_pred HHHHHHh---ccchhHHHHHHHHHHHHHH-HHHhhcCCCC--CHhhc-CCCC----CCChhhhHHHHHH-HHHHHHHHHH
Confidence 7666653 2245789999999999995 9999987544 67788 9998 5666777764443 2222333333
Q ss_pred HHHHHHH-hccCCccCCCCcccccccchhHHHHHHHHHHHHHHHHhhccc--hhhHHHHHHHHHHHHHHHHHHHhhccCC
Q 001087 942 VLYNCVT-TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTI--TRFHYITVGGSILAWFLFVFLYTGIMTP 1018 (1159)
Q Consensus 942 vif~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~--~~~~~~~i~~si~~~~~~~~~~~~~~~~ 1018 (1159)
+.|++.+ .+. .+ ... ....+.+..|+.+++...+++ +.+++. .++.+...+..+++.+++.++..++|+
T Consensus 786 ~~~~~~~~~~~-~~----~~~-~~~~~~t~~f~~l~~~q~~~~-~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~- 857 (903)
T PRK15122 786 TTFALMWFVFA-AN----SVE-MQALFQSGWFIEGLLSQTLVV-HMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPF- 857 (903)
T ss_pred HHHHHHHHHhc-cC----cHh-hhhhhHHHHHHHHHHHHHHHH-HhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhH-
Confidence 3443322 221 11 000 001245667888888887774 344432 223344455555555555555455442
Q ss_pred CCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHH
Q 001087 1019 NDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQG 1058 (1159)
Q Consensus 1019 ~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~ 1058 (1159)
..++.+|++. +++.+|++++.++++.++...+.|.
T Consensus 858 -----~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~ 893 (903)
T PRK15122 858 -----SPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKR 893 (903)
T ss_pred -----HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1134566776 7889999998888777777767663
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-94 Score=915.28 Aligned_cols=754 Identities=16% Similarity=0.191 Sum_probs=552.6
Q ss_pred hhhhHHHHHH---HHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhh---hHhhccceEEEeeC------Ce
Q 001087 13 RRVANCYFLM---ISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQN---DMTINSTPVEVLQG------QR 80 (1159)
Q Consensus 13 ~~~~n~yfl~---i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~---d~~~n~~~~~V~r~------g~ 80 (1159)
+.+.|.+.++ .++++++. ..|...+ .++++++++.+.+.++++|..++ .+++.+.+++|+|+ |+
T Consensus 99 ~~~~~p~~~lL~~aa~ls~~~---~~~~~a~-~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~ 174 (902)
T PRK10517 99 VCYRNPFNILLTILGAISYAT---EDLFAAG-VIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENG 174 (902)
T ss_pred HHHHhHHHHHHHHHHHHHHHH---ccHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCe
Confidence 4555554444 44444432 3344444 45556666777788888888766 44455688999999 78
Q ss_pred EEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEec
Q 001087 81 WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCE 160 (1159)
Q Consensus 81 ~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e 160 (1159)
+++|++++|+|||||.|++||.||||++|+++++ ++||||+|||||.|+.|.+.+..... .+
T Consensus 175 ~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES~PV~K~~~~~~~~~--------------~~ 236 (902)
T PRK10517 175 WLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGESLPVEKFATTRQPEH--------------SN 236 (902)
T ss_pred EEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCCCceecccccccccc--------------cC
Confidence 9999999999999999999999999999999765 46999999999999999886532100 00
Q ss_pred CCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhh---ccCCCCCCcCHHHHHHHHHHHH
Q 001087 161 QPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM---NSMNIPSKRSTLERKLDKLILA 237 (1159)
Q Consensus 161 ~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~---n~~~~~~k~s~l~~~~n~~~~~ 237 (1159)
.-+.+...|+||.+.+|. +.++|+.||.+|.+++ ....+..+++++++.++++..+
T Consensus 237 ~~~~~n~vfaGT~V~~G~---------------------~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~ 295 (902)
T PRK10517 237 PLECDTLCFMGTNVVSGT---------------------AQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWL 295 (902)
T ss_pred ccccccceeeCceEeeee---------------------EEEEEEEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHH
Confidence 001122456666665555 9999999999996644 4445667789999999999998
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHh
Q 001087 238 LFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQ 317 (1159)
Q Consensus 238 l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~ 317 (1159)
+..+.++++.+.++++.+... . +...+..++.+++.+||++||++++++...+
T Consensus 296 l~~~~~~~~~~v~~i~~~~~~--~-------------------------~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g 348 (902)
T PRK10517 296 LIRFMLVMAPVVLLINGYTKG--D-------------------------WWEAALFALSVAVGLTPEMLPMIVTSTLARG 348 (902)
T ss_pred HHHHHHHHHHHhhhHHHHhcC--C-------------------------HHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 888777777665444322111 1 1236777899999999999999999999998
Q ss_pred hhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCC
Q 001087 318 STQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMK 397 (1159)
Q Consensus 318 ~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~ 397 (1159)
+.++ +++++++|+++.+|+||++|+||||||||||+|+|++.++... .+.
T Consensus 349 -~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~---~~~---------------- 398 (902)
T PRK10517 349 -AVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI---SGK---------------- 398 (902)
T ss_pred -HHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC---CCC----------------
Confidence 8888 7899999999999999999999999999999999999875210 000
Q ss_pred CcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHc
Q 001087 398 IPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNF 477 (1159)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~ 477 (1159)
..+++++..++|.... . ..+||.|.|+++++...
T Consensus 399 -----------------------------------~~~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~ 432 (902)
T PRK10517 399 -----------------------------------TSERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEE 432 (902)
T ss_pred -----------------------------------CHHHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhc
Confidence 0123444444443221 1 13799999999998753
Q ss_pred CcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcC------
Q 001087 478 GFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANG------ 551 (1159)
Q Consensus 478 g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~------ 551 (1159)
+.. . ....|+.+..+||||+||||+++++.+++...+++|||++.|+++|+..
T Consensus 433 ~~~-------------~--------~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~ 491 (902)
T PRK10517 433 SAR-------------S--------LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEI 491 (902)
T ss_pred chh-------------h--------hhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCe
Confidence 210 0 1245677888999999999999998877888999999999999999741
Q ss_pred ---ChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecc
Q 001087 552 ---NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIED 628 (1159)
Q Consensus 552 ---~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD 628 (1159)
+++..+.+.+..++++.+|+|++++|||+++.++. ++ ....|+|++|+|+++++|
T Consensus 492 ~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~-~~---------------------~~~~e~~l~~lGli~~~D 549 (902)
T PRK10517 492 VPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG-DY---------------------QRADESDLILEGYIAFLD 549 (902)
T ss_pred ecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc-cc---------------------ccccccCceeeehHhhhC
Confidence 12345667778899999999999999998865421 00 011378999999999999
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
|+|++++++|+.|+++||+|+|+|||++.||.+||++|||..+.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~------------------------------------ 593 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGE------------------------------------ 593 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCccC------------------------------------
Confidence 99999999999999999999999999999999999999994211
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEec
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 788 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iG 788 (1159)
+++|.+++.+.++++.+...+ ..||||++|+||.++|+.+ |+.|++|+|+|
T Consensus 594 ----------------------v~~G~el~~l~~~el~~~~~~------~~VfAr~sPe~K~~IV~~L-q~~G~vVam~G 644 (902)
T PRK10517 594 ----------------------VLIGSDIETLSDDELANLAER------TTLFARLTPMHKERIVTLL-KREGHVVGFMG 644 (902)
T ss_pred ----------------------ceeHHHHHhCCHHHHHHHHhh------CcEEEEcCHHHHHHHHHHH-HHCCCEEEEEC
Confidence 567777777666665554443 3499999999999999999 67899999999
Q ss_pred CCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 789 DGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTF 866 (1159)
Q Consensus 789 DG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~ 866 (1159)
||+||+|||++|||||++ +|+|. |+++||++|.++++.... ++.+||..|+|+++++.|.+..|+..++..++..+
T Consensus 645 DGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~ 722 (902)
T PRK10517 645 DGINDAPALRAADIGISVDGAVDI--AREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASA 722 (902)
T ss_pred CCcchHHHHHhCCEEEEeCCcCHH--HHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999999988 77887 999999999999998877 79999999999999999999999999888887776
Q ss_pred hcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHH-HHHHHHHHHHHHHHH
Q 001087 867 QTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVA-IWAFFSVYQSLVLYN 945 (1159)
Q Consensus 867 ~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~-~~~~~~~~~s~vif~ 945 (1159)
+..| .++.+.|++|.|++++ +|.++++.++. ++++|.++|+ ++.+.+. ..++.|++.+++.+.
T Consensus 723 ~~~~---~pl~~~qiL~inl~~D-~~~~al~~d~~--~~~~m~~p~r----------~~~~~~~~~~~~~g~~~~~~~~~ 786 (902)
T PRK10517 723 FLPF---LPMLPLHLLIQNLLYD-VSQVAIPFDNV--DDEQIQKPQR----------WNPADLGRFMVFFGPISSIFDIL 786 (902)
T ss_pred Hhhh---hhhHHHHHHHHHHHHH-HhHHhhcCCCC--ChhhhcCCCC----------CCHHHHHHHHHHHHHHHHHHHHH
Confidence 6322 3588999999999999 79999987544 6778877665 1111122 123445554433332
Q ss_pred HHHh-ccCCccCCCCcccccccchhHHHHHHHHHHHHHHHHhhccc--hhhHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 001087 946 CVTT-SSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTI--TRFHYITVGGSILAWFLFVFLYTGIMTPNDRQ 1022 (1159)
Q Consensus 946 ~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~--~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~ 1022 (1159)
.++. ++..... ... ....+.+..|+.+++...+.+. .+++. .++.+...|..+++.++..++..++|.
T Consensus 787 ~~~~~~~~~~~~-~~~--~~~~~~~~~F~~~~~~q~~~~~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----- 857 (902)
T PRK10517 787 TFCLMWWVFHAN-TPE--TQTLFQSGWFVVGLLSQTLIVH-MIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPF----- 857 (902)
T ss_pred HHHHHHHHcccc-chh--hHhHHHHHHHHHHHHHHHHHHH-hhccCCCCcccchHHHHHHHHHHHHHHHHHHhhH-----
Confidence 2221 1100000 000 0012334457777777777643 33433 334556677777766666655555541
Q ss_pred CceeeEeeeec-cc--hHHHHHHHHHHHH
Q 001087 1023 ENVFFVIFVLM-ST--FYFYFTLILVPVL 1048 (1159)
Q Consensus 1023 ~~~~~~~~~~~-~~--~~~w~~~l~~~~~ 1048 (1159)
+.++.++++. .+ ...|+.+++++.+
T Consensus 858 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 885 (902)
T PRK10517 858 -SPLASYLQLQALPLSYFPWLVAILAGYM 885 (902)
T ss_pred -HHHHHhhCCcCCChhHHHHHHHHHHHHH
Confidence 1234566666 44 4667776665555
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-93 Score=903.97 Aligned_cols=751 Identities=17% Similarity=0.178 Sum_probs=548.6
Q ss_pred hhhhHHHH---HHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhh---hHhhccceEEEee------CCe
Q 001087 13 RRVANCYF---LMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQN---DMTINSTPVEVLQ------GQR 80 (1159)
Q Consensus 13 ~~~~n~yf---l~i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~---d~~~n~~~~~V~r------~g~ 80 (1159)
+.+.|.+. ++.++++++. ..|+..++ ++++++++++-+.+++++..++ .+++.+.+++|+| ||+
T Consensus 65 ~~~~~p~~~iL~~~a~ls~~~---~~~~~~~i-I~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~ 140 (867)
T TIGR01524 65 RAFNNPFIYILAMLMGVSYLT---DDLEATVI-IALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGS 140 (867)
T ss_pred HHHhhHHHHHHHHHHHHHHHH---hhHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCe
Confidence 44445444 4444444432 34444444 4455556666678888777655 3455568899999 999
Q ss_pred EEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEec
Q 001087 81 WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCE 160 (1159)
Q Consensus 81 ~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e 160 (1159)
+++|+.+||+|||||.|++||.||||++|+++++ +.||||+|||||.|+.|.+.+.... .. +
T Consensus 141 ~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGES~PV~K~~~~~~~~---~~-----------~ 202 (867)
T TIGR01524 141 MDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGESLPVEKFVEDKRAR---DP-----------E 202 (867)
T ss_pred EEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCCCCcccccCCccccc---cc-----------c
Confidence 9999999999999999999999999999999766 3599999999999999988653200 00 0
Q ss_pred CCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhh---ccCCCCCCcCHHHHHHHHHHHH
Q 001087 161 QPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM---NSMNIPSKRSTLERKLDKLILA 237 (1159)
Q Consensus 161 ~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~---n~~~~~~k~s~l~~~~n~~~~~ 237 (1159)
..+.....|+||.+.+|. +.++|+.||.+|.+.+ .... +.+++++++.++++..+
T Consensus 203 ~~~~~n~vfaGT~v~~G~---------------------~~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~ 260 (867)
T TIGR01524 203 ILERENLCFMGTNVLSGH---------------------AQAVVLATGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKL 260 (867)
T ss_pred ccccccceecCCeEEEeE---------------------EEEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHH
Confidence 011222456666666666 9999999999996643 3344 55679999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHh
Q 001087 238 LFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQ 317 (1159)
Q Consensus 238 l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~ 317 (1159)
+..+.++++++.++++.+... .| ...+..++.+++.+||++||++++++...+
T Consensus 261 ~~~~~~~~~~i~~~~~~~~~~--~~-------------------------~~~~~~al~l~v~~iP~~Lp~~vt~~la~g 313 (867)
T TIGR01524 261 LIRFMLVMVPVVLMINGLMKG--DW-------------------------LEAFLFALAVAVGLTPEMLPMIVSSNLAKG 313 (867)
T ss_pred HHHHHHHHHHHheehHHHhcC--CH-------------------------HHHHHHHHHHHHHhCcchHHHHHHHHHHHH
Confidence 888888777665544322111 11 226777889999999999999999999998
Q ss_pred hhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCC
Q 001087 318 STQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMK 397 (1159)
Q Consensus 318 ~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~ 397 (1159)
+.++ +++++++|+++.+|+||++++||||||||||+|+|++.++.... .
T Consensus 314 -~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~----~---------------- 362 (867)
T TIGR01524 314 -AINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSS----G---------------- 362 (867)
T ss_pred -HHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCC----C----------------
Confidence 8888 78999999999999999999999999999999999998863100 0
Q ss_pred CcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHc
Q 001087 398 IPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNF 477 (1159)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~ 477 (1159)
. ...+++...++|.... . ..+||.|.|+++++.+.
T Consensus 363 -------------------------------~---~~~~~l~~a~l~~~~~----~-------~~~~p~~~Al~~~~~~~ 397 (867)
T TIGR01524 363 -------------------------------E---TSERVLKMAWLNSYFQ----T-------GWKNVLDHAVLAKLDES 397 (867)
T ss_pred -------------------------------C---CHHHHHHHHHHhCCCC----C-------CCCChHHHHHHHHHHhh
Confidence 0 0123344444443210 0 13699999999998753
Q ss_pred CcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcC------
Q 001087 478 GFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANG------ 551 (1159)
Q Consensus 478 g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~------ 551 (1159)
+.. . ....|+.+..+||+|+||||+++++++++...+++|||++.|+++|+..
T Consensus 398 ~~~------------~---------~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~ 456 (867)
T TIGR01524 398 AAR------------Q---------TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAV 456 (867)
T ss_pred chh------------h---------HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCce
Confidence 211 0 1245677788999999999999998877678899999999999999741
Q ss_pred ---ChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecc
Q 001087 552 ---NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIED 628 (1159)
Q Consensus 552 ---~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD 628 (1159)
+++..+.+.+.+++++.+|+|++++|||+++.++.+ + .+..|+||+|+|+++++|
T Consensus 457 ~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~---------------------~~~~e~~l~~lGli~l~D 514 (867)
T TIGR01524 457 VTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-F---------------------TKTDEEQLIIEGFLGFLD 514 (867)
T ss_pred ecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-c---------------------cccccCCcEEEEEEEeeC
Confidence 123456678888999999999999999998764320 0 012378999999999999
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
|+|+|++++|++|+++||+++|+|||+..||.+||+++||.+++
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~------------------------------------ 558 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND------------------------------------ 558 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC------------------------------------
Confidence 99999999999999999999999999999999999999995321
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEec
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 788 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iG 788 (1159)
+++|.+++.+.++++.+... +..||||++|+||.++|+.+ |+.|++|+|+|
T Consensus 559 ----------------------v~~g~~l~~~~~~el~~~~~------~~~vfAr~~Pe~K~~iV~~l-q~~G~vVam~G 609 (867)
T TIGR01524 559 ----------------------FLLGADIEELSDEELARELR------KYHIFARLTPMQKSRIIGLL-KKAGHTVGFLG 609 (867)
T ss_pred ----------------------eeecHhhhhCCHHHHHHHhh------hCeEEEECCHHHHHHHHHHH-HhCCCEEEEEC
Confidence 45666666655555444333 33599999999999999999 67899999999
Q ss_pred CCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 789 DGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTF 866 (1159)
Q Consensus 789 DG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~ 866 (1159)
||+||+|||++|||||++ +|+|. |+++||+++.+++|.... ++.+||..|+|+++++.|.+..|+..++..++..+
T Consensus 610 DGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~ 687 (867)
T TIGR01524 610 DGINDAPALRKADVGISVDTAADI--AKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASA 687 (867)
T ss_pred CCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 999999999999999998 67887 999999999999998877 79999999999999999999999998888777666
Q ss_pred hcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHH---
Q 001087 867 QTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVL--- 943 (1159)
Q Consensus 867 ~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vi--- 943 (1159)
+. +..++.+.|++|.|++++ +|.++++..++ ++++|.++|+ . +.+. ....++..|++.+++.
T Consensus 688 ~~---~~~pl~~~qil~inl~~d-~~~~al~~~~~--~~~~m~~p~~-~----~~~~----~~~~~~~~g~~~~~~~~~~ 752 (867)
T TIGR01524 688 FI---PFLPMLSLHLLIQNLLYD-FSQLTLPWDKM--DREFLKKPHQ-W----EQKG----MGRFMLCIGPVSSIFDIAT 752 (867)
T ss_pred Hh---hhhhHHHHHHHHHHHHHH-HHHHhhcCCCC--ChHhhCCCCC-C----Chhh----HHHHHHHHHHHHHHHHHHH
Confidence 53 224589999999999999 79999997544 6777764443 2 1111 1222334455444333
Q ss_pred HHHHH-hccCCccCCCCcccccccchhHHHHHHHHHHHHHHHHhhccc--hhhHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 001087 944 YNCVT-TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTI--TRFHYITVGGSILAWFLFVFLYTGIMTPND 1020 (1159)
Q Consensus 944 f~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~--~~~~~~~i~~si~~~~~~~~~~~~~~~~~~ 1020 (1159)
|++.+ .+.. .+. .....+.+..|+.+++...+.+. .+|+. ..+.+...+..+++.+++.++..++|+.
T Consensus 753 ~~~~~~~~~~-----~~~-~~~~~~~t~~f~~~~~~~~~~~~-~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~-- 823 (867)
T TIGR01524 753 FLLMWFVFSA-----NTV-EEQALFQSGWFVVGLLSQTLVVH-MIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFS-- 823 (867)
T ss_pred HHHHHHHhcc-----cch-hhhhHHHHHHHHHHHHHHHHHHH-hhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchh--
Confidence 32222 1110 010 01112456678888888877743 44443 2345566677777776666665555431
Q ss_pred CCCceeeEeeeec-c--chHHHHHHHHHHHH
Q 001087 1021 RQENVFFVIFVLM-S--TFYFYFTLILVPVL 1048 (1159)
Q Consensus 1021 ~~~~~~~~~~~~~-~--~~~~w~~~l~~~~~ 1048 (1159)
+++.+|++. . ++..|+.++.++.+
T Consensus 824 ----~~~~~f~~~~l~~~~~~~~~~~~~~~~ 850 (867)
T TIGR01524 824 ----PLGHSIGLVSLPLSYFPWLIAILVGYM 850 (867)
T ss_pred ----hhhhhhccccCCccHHHHHHHHHHHHH
Confidence 123455555 3 34457666665544
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-89 Score=853.65 Aligned_cols=676 Identities=18% Similarity=0.227 Sum_probs=522.1
Q ss_pred hhhhHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHh---hccceEEEeeCCeEEEeeccCc
Q 001087 13 RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMT---INSTPVEVLQGQRWVSIPWRKL 89 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~---~n~~~~~V~r~g~~~~i~~~~l 89 (1159)
..+.++.+++.++++++. ..|...++ ++++++++++.+++++++..++.+. +.+.+++|+|||++++|+.+||
T Consensus 35 ~~~~~~lL~~aa~~s~~~---~~~~~~~~-i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~L 110 (755)
T TIGR01647 35 WNPLSWVMEAAAIIAIAL---ENWVDFVI-ILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASEL 110 (755)
T ss_pred hchHHHHHHHHHHHHHhh---cchhhhhh-hhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhC
Confidence 444444455555565543 34555544 4455556666689999888876544 4578899999999999999999
Q ss_pred ccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCccee
Q 001087 90 QVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTF 169 (1159)
Q Consensus 90 ~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f 169 (1159)
+|||||.|++||.||||++++++++. .||||+|||||.|+.|.+.+ ..|
T Consensus 111 v~GDiV~l~~Gd~IPaDg~vi~g~~~----~VDeS~LTGES~PV~K~~~~---------------------------~v~ 159 (755)
T TIGR01647 111 VPGDVVRLKIGDIVPADCRLFEGDYI----QVDQAALTGESLPVTKKTGD---------------------------IAY 159 (755)
T ss_pred cCCCEEEECCCCEEeceEEEEecCce----EEEcccccCCccceEeccCC---------------------------eee
Confidence 99999999999999999999987653 59999999999999998754 459
Q ss_pred EEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhh---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHH
Q 001087 170 TGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM---NSMNIPSKRSTLERKLDKLILALFATLTVMC 246 (1159)
Q Consensus 170 ~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~---n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~ 246 (1159)
+||.+.+|. +.++|+.||.+|.+.+ ...+.+..++++|+.++++..++.++.++++
T Consensus 160 aGT~v~~G~---------------------~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~ 218 (755)
T TIGR01647 160 SGSTVKQGE---------------------AEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLV 218 (755)
T ss_pred ccCEEEccE---------------------EEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999988 9999999999996644 4445566679999999999999988888877
Q ss_pred HHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhcccc
Q 001087 247 LICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDL 326 (1159)
Q Consensus 247 ~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~ 326 (1159)
++.++++.+... .. +...+..++.+++.+||++||++++++...+ +.++
T Consensus 219 ~i~~~~~~~~~~-~~-------------------------~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g-~~r~---- 267 (755)
T TIGR01647 219 LIELVVLFFGRG-ES-------------------------FREGLQFALVLLVGGIPIAMPAVLSVTMAVG-AAEL---- 267 (755)
T ss_pred HHHHHHHHHHcC-CC-------------------------HHHHHHHHHHHHHHhCCcchHHHHHHHHHHH-HHHH----
Confidence 776655433111 11 1236777899999999999999999999999 8888
Q ss_pred ccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchh
Q 001087 327 HMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVK 406 (1159)
Q Consensus 327 ~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (1159)
+++++++|+.+.+|+||.+|+||||||||||+|+|++.+++..+..+
T Consensus 268 ------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~--------------------------- 314 (755)
T TIGR01647 268 ------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF--------------------------- 314 (755)
T ss_pred ------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCC---------------------------
Confidence 78999999999999999999999999999999999999986532100
Q ss_pred hhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecC
Q 001087 407 AVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTP 486 (1159)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~ 486 (1159)
...++++..++|+. + ..+||.|.|+++++++.+-
T Consensus 315 --------------------------~~~~~l~~a~~~~~------~-------~~~~pi~~Ai~~~~~~~~~------- 348 (755)
T TIGR01647 315 --------------------------DKDDVLLYAALASR------E-------EDQDAIDTAVLGSAKDLKE------- 348 (755)
T ss_pred --------------------------CHHHHHHHHHHhCC------C-------CCCChHHHHHHHHHHHhHH-------
Confidence 01134555555542 1 1369999999999876431
Q ss_pred ceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCC-CcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHH
Q 001087 487 TMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD-GRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQ 565 (1159)
Q Consensus 487 ~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~ 565 (1159)
....|++++.+||+|.+|+|+++++.++ |+.++++|||++.|+++|+.. .+..+.+.+.+++
T Consensus 349 ----------------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-~~~~~~~~~~~~~ 411 (755)
T TIGR01647 349 ----------------ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-KEIEEKVEEKVDE 411 (755)
T ss_pred ----------------HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-HHHHHHHHHHHHH
Confidence 1234677888999999999999998764 778889999999999999753 2456677888999
Q ss_pred HhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcC
Q 001087 566 FGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAG 645 (1159)
Q Consensus 566 ~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aG 645 (1159)
++.+|+|++++|+|+ .|++|+|+|+++++||+|+|++++|+.|+++|
T Consensus 412 ~~~~G~rvl~vA~~~---------------------------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aG 458 (755)
T TIGR01647 412 LASRGYRALGVARTD---------------------------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLG 458 (755)
T ss_pred HHhCCCEEEEEEEEc---------------------------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCC
Confidence 999999999999972 14799999999999999999999999999999
Q ss_pred CeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCC
Q 001087 646 IKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISG 725 (1159)
Q Consensus 646 IkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (1159)
|+++|+|||++.||.+||++|||.++. ++.+.
T Consensus 459 I~v~miTGD~~~tA~~IA~~lGI~~~~-----~~~~~------------------------------------------- 490 (755)
T TIGR01647 459 VEVKMVTGDHLAIAKETARRLGLGTNI-----YTADV------------------------------------------- 490 (755)
T ss_pred CeEEEECCCCHHHHHHHHHHcCCCCCC-----cCHHH-------------------------------------------
Confidence 999999999999999999999996421 00000
Q ss_pred CceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhccccee
Q 001087 726 EKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVG 805 (1159)
Q Consensus 726 ~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIg 805 (1159)
+.+|.+++.+.++++.+...+ ..+|||++|+||.++|+.+ |+.|++|+|+|||+||+|||++|||||+
T Consensus 491 -----l~~~~~~~~~~~~~~~~~~~~------~~vfAr~~Pe~K~~iV~~l-q~~G~~VamvGDGvNDapAL~~AdVGIA 558 (755)
T TIGR01647 491 -----LLKGDNRDDLPSGELGEMVED------ADGFAEVFPEHKYEIVEIL-QKRGHLVGMTGDGVNDAPALKKADVGIA 558 (755)
T ss_pred -----hcCCcchhhCCHHHHHHHHHh------CCEEEecCHHHHHHHHHHH-HhcCCEEEEEcCCcccHHHHHhCCeeEE
Confidence 122333333333343333332 2499999999999999999 6789999999999999999999999999
Q ss_pred e-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHH
Q 001087 806 I-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSL 883 (1159)
Q Consensus 806 i-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~~~~~~l~~ 883 (1159)
+ +|+|. |+++||+++.++++.... ++.+||..|+|+++++.|.+..|+...++.+...++.+| + +++++++|
T Consensus 559 m~~gtdv--AkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~---~-l~~~~il~ 632 (755)
T TIGR01647 559 VAGATDA--ARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF---Y-FPPIMVVI 632 (755)
T ss_pred ecCCcHH--HHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc---c-hhHHHHHH
Confidence 9 67787 999999999999998877 899999999999999999999999988777766655443 3 88999999
Q ss_pred HHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hccCCcc-CCCCcc
Q 001087 884 YNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSATGQ-NSSGKI 961 (1159)
Q Consensus 884 ~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~~~~~-~~~g~~ 961 (1159)
.|++.+. |.++++....+.+ +.|+ ...++ +.+...++.|++.++..|.+.+ .+....+ ...+..
T Consensus 633 ~~l~~d~-~~~~l~~~~~~~~-----~~p~-------~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (755)
T TIGR01647 633 IAILNDG-TIMTIAYDNVKPS-----KLPQ-------RWNLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQ 698 (755)
T ss_pred HHHHHhH-hHhhccCCCCCCC-----CCCC-------ccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccccc
Confidence 9999995 7999986554321 2332 22222 3344456678877776665554 2211000 001111
Q ss_pred cccccchhHHHHHHHHHHHHHHH
Q 001087 962 FGIWDVSTMAFTCVVVTVNLRLL 984 (1159)
Q Consensus 962 ~~~~~~~~~~~~~~v~~~~~~~~ 984 (1159)
.....+.|++|+.+++...+.+.
T Consensus 699 ~~~~~~~t~~f~~~~~~~~~~~~ 721 (755)
T TIGR01647 699 LLHGNLQSLIYLQVSISGQATIF 721 (755)
T ss_pred ccHhhhHHHHHHHHHHHHHHHHh
Confidence 12235779999999998888854
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-89 Score=788.45 Aligned_cols=852 Identities=19% Similarity=0.223 Sum_probs=637.8
Q ss_pred cHHH-hhhhhhHH---HHHHHHHHhhcc--c--------ccccccchhhhHHHHHHHHHHHHHHHHHHHh---hhhHhhc
Q 001087 7 QKGC-LNRRVANC---YFLMISILSTTP--M--------SPVNPVTNVVPLSLVLLVSLIKEAWEDWKRF---QNDMTIN 69 (1159)
Q Consensus 7 pk~L-~~~~~~n~---yfl~i~il~~i~--~--------s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~---~~d~~~n 69 (1159)
|+.. |.++..|. ..++.++++++. + ++.+.|..++ |..++.++.+-..+++.+.. .+-+.+-
T Consensus 83 ~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~gii-L~~vv~vtg~~~~~qe~ks~~im~sF~~l~ 161 (1019)
T KOG0203|consen 83 PEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIV-LAAVVIVTGLFSYYQEAKSSKIMDSFKNLV 161 (1019)
T ss_pred hHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEE-EEEEEEEEecCCCccchhhHHHHHHHhccc
Confidence 4444 44455444 444456666653 1 1234444444 44444555554555554443 3456677
Q ss_pred cceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhh
Q 001087 70 STPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEK 149 (1159)
Q Consensus 70 ~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~ 149 (1159)
+..++|+|+|+...+..++|+|||+|.++-|+++|||++++++.+ |+||+|+|||||.|..+.+.-...+-.
T Consensus 162 P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTGesEP~~~~~~~t~~~~~---- 233 (1019)
T KOG0203|consen 162 PQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTGESEPQTRSPEFTHENPL---- 233 (1019)
T ss_pred hhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEeccccccccCCccCCccccccCch----
Confidence 899999999999999999999999999999999999999999887 579999999999999987754221110
Q ss_pred hcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccC---CCCCCcCH
Q 001087 150 ASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSM---NIPSKRST 226 (1159)
Q Consensus 150 ~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~---~~~~k~s~ 226 (1159)
......|.+|..++|. ++|+|++||.+|.+++.+. .....++|
T Consensus 234 -------------Et~Ni~f~st~~veG~---------------------~~givi~tGd~Tv~G~ia~l~~~~~~~~t~ 279 (1019)
T KOG0203|consen 234 -------------ETRNIAFFSTNCVEGT---------------------GRGIVIATGDRTVMGRIASLASGLEDGKTP 279 (1019)
T ss_pred -------------hheeeeeeeeEEecce---------------------EEEEEEecCCceEEeehhhhhccCCCCCCc
Confidence 1222568888888887 9999999999998866553 45677999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchh
Q 001087 227 LERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISL 306 (1159)
Q Consensus 227 l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL 306 (1159)
+++.+++++.++....+++.+..++....... ..+..+...+.+.++.+|.+|
T Consensus 280 ~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy---------------------------~~l~avv~~i~iivAnvPeGL 332 (1019)
T KOG0203|consen 280 IAKEIEHFIHIITGVAIFLGISFFILALILGY---------------------------EWLRAVVFLIGIIVANVPEGL 332 (1019)
T ss_pred chhhhhchHHHHHHHHHHHHHHHHHHHHhhcc---------------------------hhHHHhhhhheeEEecCcCCc
Confidence 99999999999988888777666544443311 122355557888899999999
Q ss_pred HHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhh
Q 001087 307 YVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEI 386 (1159)
Q Consensus 307 ~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~ 386 (1159)
+++++.....- +++| +++++++|++.++|.||...+||||||||||+|.|+|..+|.++........+.
T Consensus 333 ~~tvTv~Ltlt-akrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~ 401 (1019)
T KOG0203|consen 333 LATVTVCLTLT-AKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTED 401 (1019)
T ss_pred cceehhhHHHH-HHHH----------hhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhh
Confidence 99999999999 9999 899999999999999999999999999999999999999999887654332221
Q ss_pred hhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCce--EEecCC
Q 001087 387 ERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERI--TYQAAS 464 (1159)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~--~y~~~s 464 (1159)
.... . ....+.....+.++..+||.+.....+.+-.+ .-..++
T Consensus 402 ~~~~-----------------------~------------~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~ 446 (1019)
T KOG0203|consen 402 QSGQ-----------------------S------------FDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGD 446 (1019)
T ss_pred hhcc-----------------------c------------ccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCC
Confidence 1110 0 01113456688999999999988754432111 123589
Q ss_pred hhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCC---CcEEEEEecch
Q 001087 465 PDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD---GRLVLYCKGAD 541 (1159)
Q Consensus 465 pdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~---g~~~l~~KGA~ 541 (1159)
+.|.||++++.-.-... ...+..++.+...||||++|..-.+.+.+| .+..+.+||||
T Consensus 447 ~se~ALlk~~e~~~~~~-------------------~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGap 507 (1019)
T KOG0203|consen 447 ASEVALLKFIELILGSV-------------------MELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAP 507 (1019)
T ss_pred HHHHHHHHHHHHhcchH-------------------HHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCCh
Confidence 99999999987532110 002456677888999999999999998765 57899999999
Q ss_pred hHHHHHhhc---------CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 001087 542 SVIYERLAN---------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAE 612 (1159)
Q Consensus 542 ~~i~~~~~~---------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~ 612 (1159)
|.++++|+. .+++..+.+.+...++...|-||+.||++.++++++.+...-.-+ . -+
T Consensus 508 e~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d---~-----------~n 573 (1019)
T KOG0203|consen 508 ERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTD---D-----------VN 573 (1019)
T ss_pred HHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecC---C-----------CC
Confidence 999999986 234566778888899999999999999999998876542111000 0 01
Q ss_pred hhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccC
Q 001087 613 LIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERG 692 (1159)
Q Consensus 613 ~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~ 692 (1159)
.--.+|.|+|++++-||+|..+|+++..|+.||||+.|+|||++.||.+||++.||+.+.....
T Consensus 574 ~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~---------------- 637 (1019)
T KOG0203|consen 574 FPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETV---------------- 637 (1019)
T ss_pred CcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhh----------------
Confidence 1236899999999999999999999999999999999999999999999999999987653211
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHH
Q 001087 693 DPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQV 772 (1159)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~i 772 (1159)
+. ...+.....+ ...+....+.||.|.+|..+.++++.+.+. .-.-.||||.||+||..|
T Consensus 638 ------e~----~a~r~~~~v~------~vn~~~a~a~VihG~eL~~~~~~qld~il~----nh~eIVFARTSPqQKLiI 697 (1019)
T KOG0203|consen 638 ------ED----IAKRLNIPVE------QVNSRDAKAAVIHGSELPDMSSEQLDELLQ----NHQEIVFARTSPQQKLII 697 (1019)
T ss_pred ------hh----hHHhcCCccc------ccCccccceEEEecccccccCHHHHHHHHH----hCCceEEEecCccceEEe
Confidence 00 1111111111 122334679999999999888776665554 445689999999999999
Q ss_pred HHHHHhccCcEEEEecCCccCHHHHHhcccce--eecCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHH
Q 001087 773 TSLVKKGARKITLSIGDGANDVSMIQAAHIGV--GISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLY 849 (1159)
Q Consensus 773 V~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI--gisg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~ 849 (1159)
|+.. |+.|.+|+.+|||+||+||||.||||| ||+|++. ++.|||++|.|++|.++. -+.+||.+|.|++|.|.|
T Consensus 698 Ve~c-Qr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAY 774 (1019)
T KOG0203|consen 698 VEGC-QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAY 774 (1019)
T ss_pred Ehhh-hhcCcEEEEeCCCcCCChhhcccccceeeccccchH--HHhhcceEEecCcchhheeecccceehhhhHHHHHHH
Confidence 9999 899999999999999999999999999 6699999 999999999999999988 589999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccc-hhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHH
Q 001087 850 FFYKNLTFTLTQFWFTFQTGFSGQRF-YDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRV 928 (1159)
Q Consensus 850 ~~~kni~~~~~~~~~~~~~~fsg~~~-~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~ 928 (1159)
.+..|+..+.+.++|.++ |.|+ +...+++.+.+..+..|++.|+.+.+ ++++|+|.|+ .+...++.|.+.
T Consensus 775 TLTsNipEI~PfL~fi~~----giPLplgtitIL~IDLgTDmvPAiSLAYE~a--EsDIM~r~PR---~p~~D~LVN~rL 845 (1019)
T KOG0203|consen 775 TLTSNIPEITPFLLFILF----GIPLPLGTVTILCIDLGTDIVPAISLAYEKA--ESDIMLRPPR---NPKDDKLVNKRL 845 (1019)
T ss_pred HHHhcchhHhHHHHHHHh----CCCcccchhhhhhhHhhcccchhhhHhccCc--hhhHHhcCCC---CCcccccccchh
Confidence 999999999999888888 7887 78899999999999999999998665 8899999998 235677888887
Q ss_pred H-HHHHHHHHHHHHHHHHHHH-hccCCccC---------------------CCCccccc-------ccchhHHHHHHHHH
Q 001087 929 V-AIWAFFSVYQSLVLYNCVT-TSSATGQN---------------------SSGKIFGI-------WDVSTMAFTCVVVT 978 (1159)
Q Consensus 929 f-~~~~~~~~~~s~vif~~~~-~~~~~~~~---------------------~~g~~~~~-------~~~~~~~~~~~v~~ 978 (1159)
+ ..++..|.+|++..|+.++ .+...++. +-|+.-.+ +...+..|.+++.+
T Consensus 846 i~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~ 925 (1019)
T KOG0203|consen 846 ISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVV 925 (1019)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHH
Confidence 4 5688889999999998877 44433332 11222111 12234455555555
Q ss_pred HHHHHHHh-hccchh----hHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHH
Q 001087 979 VNLRLLMM-CNTITR----FHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLG 1052 (1159)
Q Consensus 979 ~~~~~~l~-~~~~~~----~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~ 1052 (1159)
+...+.+. ++.-+. +.++.++.++++-.++..+..+.|. ....+++. +-+.+|+..+...++.++.
T Consensus 926 Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg--------~~~~l~~~pl~~~~wl~a~P~~ilIfvy 997 (1019)
T KOG0203|consen 926 QWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPG--------VLYALGMYPLKFQWWLVAFPFGILIFVY 997 (1019)
T ss_pred hHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCcc--------HHHHhccCCCCcEEEEecccceeeeeeH
Confidence 55554332 222222 2345555555555555455555432 33445555 6678899999999999999
Q ss_pred HHHHHHHHHhh
Q 001087 1053 DFIFQGVQRWF 1063 (1159)
Q Consensus 1053 ~~~~k~~~~~~ 1063 (1159)
|.+.|++-|.|
T Consensus 998 dE~Rk~~IR~~ 1008 (1019)
T KOG0203|consen 998 DEVRKLFIRRY 1008 (1019)
T ss_pred HHHHhHhhhhC
Confidence 99999888865
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-84 Score=758.55 Aligned_cols=785 Identities=19% Similarity=0.257 Sum_probs=545.2
Q ss_pred hhhhHHHHHHHHHHhhcc-cccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhcc--ceEEEeeCCeEEEeeccCc
Q 001087 13 RRVANCYFLMISILSTTP-MSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINS--TPVEVLQGQRWVSIPWRKL 89 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~-~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~--~~~~V~r~g~~~~i~~~~l 89 (1159)
..+-|.||++-++--.+. ...+.+|. ..++++...|.+-..+|..+..+..+++-. ..|+|+|+|.|++|.++||
T Consensus 191 ~EvL~PfYlFQ~fSv~lW~~d~Y~~YA--~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eL 268 (1140)
T KOG0208|consen 191 KEVLNPFYLFQAFSVALWLADSYYYYA--FCIVIISVYSIVLSVYETRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSEL 268 (1140)
T ss_pred HhccchHHHHHhHHhhhhhcccchhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCEEEEEecccc
Confidence 667778888764433333 33344443 334445555666666777666666666654 4789999999999999999
Q ss_pred ccceEEEEcc-CCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcce
Q 001087 90 QVGDIVMVKQ-DGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYT 168 (1159)
Q Consensus 90 ~vGDIV~v~~-ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~ 168 (1159)
+||||+.+.+ +-..|||++|++ |.|.||||+|||||.|+.|.+++.-.+ ...-.+.+..-+.+...
T Consensus 269 VPGDil~i~~~~~~~PcDa~Li~-----g~civNEsmLTGESVPv~K~~l~~~~~--------~~~~~~~~~~~~~rh~l 335 (1140)
T KOG0208|consen 269 VPGDILYIPPPGKIMPCDALLIS-----GDCIVNESMLTGESVPVTKTPLPMGTD--------SLDSITISMSTNSRHTL 335 (1140)
T ss_pred ccccEEEECCCCeEeecceEEEe-----CcEEeecccccCCcccccccCCccccc--------cCcCeeechhhcCccee
Confidence 9999999998 999999999997 779999999999999999999872111 01112334444666788
Q ss_pred eEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccch---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH
Q 001087 169 FTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALFATLTVM 245 (1159)
Q Consensus 169 f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~T---k~~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l 245 (1159)
|.||..++-+... .+-+.++|++||..| ++.++...++.-...+.+..-+++..+.++
T Consensus 336 fcGT~vlq~r~~~---------------g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~i---- 396 (1140)
T KOG0208|consen 336 FCGTKVLQARAYL---------------GGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVII---- 396 (1140)
T ss_pred eccceEEEeecCC---------------CCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHH----
Confidence 9999988755221 233899999999999 566676666655566666665555444433
Q ss_pred HHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccc
Q 001087 246 CLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKD 325 (1159)
Q Consensus 246 ~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d 325 (1159)
+++++++..+..... + ...-..+++++.++...+|.+||.++++..... ..++
T Consensus 397 a~~gfiy~~i~l~~~----g-------------------~~~~~iiirsLDliTi~VPPALPAaltvG~~~a-~~RL--- 449 (1140)
T KOG0208|consen 397 ALIGFIYTAIVLNLL----G-------------------VPLKTIIIRSLDLITIVVPPALPAALTVGIIYA-QSRL--- 449 (1140)
T ss_pred HHHHHHHHhHhHHHc----C-------------------CCHHHHhhhhhcEEEEecCCCchhhhhHHHHHH-HHHH---
Confidence 333333322221100 0 001127888999999999999999999998888 7777
Q ss_pred cccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccch
Q 001087 326 LHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSV 405 (1159)
Q Consensus 326 ~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (1159)
.++++.|-+++.+..-|+++.+|||||||||++.+++-.+..-...-..+ ++.......
T Consensus 450 -------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~-~~~~~~~~~------------- 508 (1140)
T KOG0208|consen 450 -------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDG-PELKVVTED------------- 508 (1140)
T ss_pred -------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecccccccc-chhhhhhhh-------------
Confidence 78999999999999999999999999999999999998876532211000 000000000
Q ss_pred hhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeec
Q 001087 406 KAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRT 485 (1159)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~ 485 (1159)
....+ .... -+........|..++|.||+....... ..++|.|.-+.+. .|+.+.+.+
T Consensus 509 -----~~~~~------~~l~-~~~~~~~~~~~~~a~atCHSL~~v~g~-------l~GDPLdlkmfe~---t~w~~ee~~ 566 (1140)
T KOG0208|consen 509 -----SLQLF------YKLS-LRSSSLPMGNLVAAMATCHSLTLVDGT-------LVGDPLDLKMFES---TGWVYEEAD 566 (1140)
T ss_pred -----hccce------eecc-ccccCCchHHHHHHHhhhceeEEeCCe-------eccCceeeeeeec---cceEEEecc
Confidence 00000 0000 001111235788999999988664322 2367777666554 667764421
Q ss_pred -----------CceEEEEecc---ccccCccceEEEEEeEeecCCCCCceEEEEEEcC-CCcEEEEEecchhHHHHHhhc
Q 001087 486 -----------PTMIYVRESH---VEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYA-DGRLVLYCKGADSVIYERLAN 550 (1159)
Q Consensus 486 -----------~~~i~i~~~~---~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~g~~~l~~KGA~~~i~~~~~~ 550 (1159)
.....++-+. ...... ....+.+++.+||+|..+||||||+++ +.+..+|+|||||.|.+.|++
T Consensus 567 ~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~-~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p 645 (1140)
T KOG0208|consen 567 IEDEATREFNTLIPTVVRPPENAFNQSTEC-GEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP 645 (1140)
T ss_pred ccchhhhhhCCccCCEeCCCcccccCCCcC-CCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc
Confidence 0111121111 000000 123799999999999999999999987 357899999999999999998
Q ss_pred CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccc
Q 001087 551 GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKL 630 (1159)
Q Consensus 551 ~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~l 630 (1159)
+. +++++++.+++|+.+|+|++++|+|.|+.. .|.+. ....++.+|.||+|+|++.+|++|
T Consensus 646 ~t--vP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~--------------~~~~Rd~vEs~l~FlGLiVmeNkL 706 (1140)
T KOG0208|consen 646 ET--VPADYQEVLKEYTHQGFRVIALASKELETS---TLQKA--------------QKLSRDTVESNLEFLGLIVMENKL 706 (1140)
T ss_pred cc--CCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHH--------------hhccHhhhhccceeeEEEEeeccc
Confidence 64 678899999999999999999999999876 33221 112347889999999999999999
Q ss_pred cCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccch---h--cccCChHHHHHHHHHHH
Q 001087 631 QEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRD---V--EERGDPVEIARFMREEV 705 (1159)
Q Consensus 631 q~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~---~--~~~~~~~~~~~~~~~~~ 705 (1159)
|+..+.+|++|++|+|+++|+||||..||+.+|++||++.+..+++....+..+..+ . ...++.... ...++..
T Consensus 707 K~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~-~~~~~~~ 785 (1140)
T KOG0208|consen 707 KEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQF-LDPKEPD 785 (1140)
T ss_pred ccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCcccc-CCCCccC
Confidence 999999999999999999999999999999999999999998887776654221100 0 000000000 0000000
Q ss_pred HHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEE
Q 001087 706 KRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITL 785 (1159)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl 785 (1159)
. + ....+...+......+.+.++|+++..++ .+..+.+.++..+| .|||||+|.||+++|+.+ |+.|++|+
T Consensus 786 ~-~----~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~~Il~~~--~VfARMsP~qK~~Lie~l-Qkl~y~Vg 856 (1140)
T KOG0208|consen 786 P-D----LASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVPKILLKG--TVFARMSPDQKAELIEAL-QKLGYKVG 856 (1140)
T ss_pred c-c----ccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHHHHHhcC--eEEeecCchhHHHHHHHH-HhcCcEEE
Confidence 0 0 00000000112346789999999999999 44455555555554 599999999999999999 78999999
Q ss_pred EecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 786 SIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWF 864 (1159)
Q Consensus 786 ~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~ 864 (1159)
|||||||||+|||+|||||++|.+| |.-||.|.-.-++.-..+ ++.+||.++..-.....|.-.+. +++|..
T Consensus 857 fCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs----~iqFis 929 (1140)
T KOG0208|consen 857 FCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYS----AIQFIS 929 (1140)
T ss_pred ecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHH----HHHHHh
Confidence 9999999999999999999999998 888999998877777666 79999999887777777764333 344444
Q ss_pred HHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHH
Q 001087 865 TFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLY 944 (1159)
Q Consensus 865 ~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif 944 (1159)
.++. ++-...+.+.|.++.+++....-+++++.+|+ ..++-...| ...+++.+.+...+++.++..++-+
T Consensus 930 v~~L-Y~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a--~~~L~~~rP-------~~~L~s~~~~~~l~~q~vli~l~q~ 999 (1140)
T KOG0208|consen 930 VVFL-YLINSNLGDLQFLFIDLLIITPIAVMMSRFDA--SDKLFPKRP-------PTNLLSKKILVPLLLQIVLICLVQW 999 (1140)
T ss_pred hhee-eeecccccchhhhhhHHHHHHHHHHHHccCcH--HHHhcCCCC-------CccccccchhhhhHHHHHHHHHHHH
Confidence 4332 22345578899999999887776777776664 444444333 4568888887777766666666655
Q ss_pred HHHH
Q 001087 945 NCVT 948 (1159)
Q Consensus 945 ~~~~ 948 (1159)
..++
T Consensus 1000 i~~l 1003 (1140)
T KOG0208|consen 1000 ILTL 1003 (1140)
T ss_pred hhhe
Confidence 5554
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-75 Score=707.53 Aligned_cols=548 Identities=16% Similarity=0.173 Sum_probs=415.3
Q ss_pred cHHHhhhhhhHHHHHHHHHHhhcc-ccc-----ccc--cchhhhHHHHHHHHHHHHHHH---HHHHhhhhHhhc---cc-
Q 001087 7 QKGCLNRRVANCYFLMISILSTTP-MSP-----VNP--VTNVVPLSLVLLVSLIKEAWE---DWKRFQNDMTIN---ST- 71 (1159)
Q Consensus 7 pk~L~~~~~~n~yfl~i~il~~i~-~s~-----~~~--~~~~~pl~~vl~vs~ik~~~e---d~~r~~~d~~~n---~~- 71 (1159)
|+.+| +.+..+..++.++++++. .-+ .+| +..+..++++++...+..+.| ++|..++.+.+. +.
T Consensus 26 ~~~~~-~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~ 104 (673)
T PRK14010 26 PVYMI-KNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEM 104 (673)
T ss_pred HHHHH-HChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 44444 445555555666666643 111 111 223333333333333333444 555544433333 33
Q ss_pred eEE-EeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhh
Q 001087 72 PVE-VLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKA 150 (1159)
Q Consensus 72 ~~~-V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~ 150 (1159)
+++ |.|||++++++.++|+|||+|.|++||.||||+++++++ +.||||+|||||.|+.|.++.+.
T Consensus 105 ~a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~-----~~VDESaLTGES~PV~K~~g~d~--------- 170 (673)
T PRK14010 105 KARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGL-----ATVDESAITGESAPVIKESGGDF--------- 170 (673)
T ss_pred eEEEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcc-----eEEecchhcCCCCceeccCCCcc---------
Confidence 565 679999999999999999999999999999999999864 45999999999999999986211
Q ss_pred cccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhh---hhccCCCCCCcCHH
Q 001087 151 SEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKV---MMNSMNIPSKRSTL 227 (1159)
Q Consensus 151 ~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l 227 (1159)
+ .+|+||.+.+|. +.++|+.||.+|.+ ....+.++.++||+
T Consensus 171 --------------~-~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~ 214 (673)
T PRK14010 171 --------------D-NVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPN 214 (673)
T ss_pred --------------C-eeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHH
Confidence 0 269999998887 99999999999955 44456677788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhH
Q 001087 228 ERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLY 307 (1159)
Q Consensus 228 ~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~ 307 (1159)
|..++.+...+.++.++++ .++. .+.. |. .....+...+.+.+.+||++|+
T Consensus 215 e~~l~~l~~~l~ii~l~~~--~~~~-~~~~-----~~---------------------~~~~~~~~~val~V~~IP~aL~ 265 (673)
T PRK14010 215 EIALFTLLMTLTIIFLVVI--LTMY-PLAK-----FL---------------------NFNLSIAMLIALAVCLIPTTIG 265 (673)
T ss_pred HHHHHHHHHHHhHHHHHHH--HHHH-HHHh-----hc---------------------cHHHHHHHHHHHHHHhhhhhHH
Confidence 9887766544433222111 1111 0000 00 0011445566777788999999
Q ss_pred HHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhh
Q 001087 308 VSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIE 387 (1159)
Q Consensus 308 v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~ 387 (1159)
..++++...+ +.++ +++++++|+.+.+|.||++|+||||||||||+|++.+.++...+.
T Consensus 266 ~~~~~~~~~g-~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~---------- 324 (673)
T PRK14010 266 GLLSAIGIAG-MDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS---------- 324 (673)
T ss_pred HHHHHHHHHH-HHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC----------
Confidence 9999988888 8887 899999999999999999999999999999997776655421000
Q ss_pred hhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhH
Q 001087 388 RGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDE 467 (1159)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE 467 (1159)
...++++...++|+.. +.||.+
T Consensus 325 --------------------------------------------~~~~~ll~~a~~~~~~--------------s~~P~~ 346 (673)
T PRK14010 325 --------------------------------------------SSFERLVKAAYESSIA--------------DDTPEG 346 (673)
T ss_pred --------------------------------------------ccHHHHHHHHHHhcCC--------------CCChHH
Confidence 0123455666677532 258999
Q ss_pred HHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHH
Q 001087 468 AALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYER 547 (1159)
Q Consensus 468 ~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~ 547 (1159)
.|++++|++.|+... .......||++++|+|++.++ |+ .+.|||++.+.++
T Consensus 347 ~AIv~~a~~~~~~~~------------------------~~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~ 397 (673)
T PRK14010 347 RSIVKLAYKQHIDLP------------------------QEVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKR 397 (673)
T ss_pred HHHHHHHHHcCCCch------------------------hhhcceeccccccceeEEEEC---CE--EEEECCHHHHHHH
Confidence 999999998775321 001123799999999999753 33 4569999999999
Q ss_pred hhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeec
Q 001087 548 LANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIE 627 (1159)
Q Consensus 548 ~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ie 627 (1159)
|...+........+..++++++|+|+++++ .|++++|+++++
T Consensus 398 ~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~--------------------------------------~~~~~lG~i~l~ 439 (673)
T PRK14010 398 VKEAGGHIPVDLDALVKGVSKKGGTPLVVL--------------------------------------EDNEILGVIYLK 439 (673)
T ss_pred hhhcCCCCchHHHHHHHHHHhCCCeEEEEE--------------------------------------ECCEEEEEEEee
Confidence 986443334456677788999999999876 267899999999
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
|++|+|++++|++||++||+++|+|||++.||.+||+++|+.+
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~------------------------------------- 482 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR------------------------------------- 482 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-------------------------------------
Confidence 9999999999999999999999999999999999999999931
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEe
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 787 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~i 787 (1159)
+++|++|+||.++|+.+ |+.|++|+|+
T Consensus 483 ----------------------------------------------------v~A~~~PedK~~iV~~l-Q~~G~~VaMt 509 (673)
T PRK14010 483 ----------------------------------------------------FVAECKPEDKINVIREE-QAKGHIVAMT 509 (673)
T ss_pred ----------------------------------------------------EEcCCCHHHHHHHHHHH-HhCCCEEEEE
Confidence 89999999999999999 6789999999
Q ss_pred cCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 788 GDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFT 865 (1159)
Q Consensus 788 GDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~ 865 (1159)
|||+||+|||++|||||++ +|++. |+++||+++.++++.+.. ++..||..|.++++++.|++..|+..++..+...
T Consensus 510 GDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~ 587 (673)
T PRK14010 510 GDGTNDAPALAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAM 587 (673)
T ss_pred CCChhhHHHHHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHH
Confidence 9999999999999999998 88888 999999999999999887 8999999999999999999999999888777655
Q ss_pred Hhccccc
Q 001087 866 FQTGFSG 872 (1159)
Q Consensus 866 ~~~~fsg 872 (1159)
|...|.+
T Consensus 588 ~~~~~~~ 594 (673)
T PRK14010 588 FMAAMPA 594 (673)
T ss_pred HHHhccc
Confidence 5544433
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-74 Score=694.64 Aligned_cols=505 Identities=18% Similarity=0.213 Sum_probs=405.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHhhc---cc-eEEEeeCCe-EEEeeccCcccceEEEEccCCccCceEEEEeecCCCC
Q 001087 43 LSLVLLVSLIKEAWEDWKRFQNDMTIN---ST-PVEVLQGQR-WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADG 117 (1159)
Q Consensus 43 l~~vl~vs~ik~~~ed~~r~~~d~~~n---~~-~~~V~r~g~-~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g 117 (1159)
+++.++++..-|.+.++|..++.+.+. +. +++|+|+|+ +++++.++|++||+|.|++||.||||+++++++
T Consensus 72 l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~---- 147 (679)
T PRK01122 72 LWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV---- 147 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc----
Confidence 333444444556677776666544443 33 699999987 899999999999999999999999999999864
Q ss_pred eEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecC
Q 001087 118 VCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNT 197 (1159)
Q Consensus 118 ~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt 197 (1159)
+.||||.|||||.|+.|.++++. ..+|+||.+.+|.
T Consensus 148 -a~VDESaLTGES~PV~K~~G~~~------------------------~~V~aGT~v~~G~------------------- 183 (679)
T PRK01122 148 -ASVDESAITGESAPVIRESGGDF------------------------SSVTGGTRVLSDW------------------- 183 (679)
T ss_pred -EEEEcccccCCCCceEeCCCCcc------------------------CeEEeceEEEeee-------------------
Confidence 46999999999999999986531 1269999999887
Q ss_pred CcEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCcc
Q 001087 198 EYIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVE 274 (1159)
Q Consensus 198 ~~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~ 274 (1159)
+.++|+.+|.+|.+ ......++.++||+|+.++.+...++.+.++++++...+ . ||...
T Consensus 184 --~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~-~-------~~~g~-------- 245 (679)
T PRK01122 184 --IVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPF-A-------AYSGG-------- 245 (679)
T ss_pred --EEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHH-H-------HHhCc--------
Confidence 99999999999955 444556667789999998887766655444333222111 1 11100
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEE
Q 001087 275 DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYI 354 (1159)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I 354 (1159)
-..+...+++++.+||++|+..++++...+ +.++ .++++++|+.+.+|.||++|+|
T Consensus 246 -------------~~~l~~~iallV~aiP~alg~l~~~i~i~g-~~r~----------ak~gvLvk~~~avE~lg~v~~I 301 (679)
T PRK01122 246 -------------ALSITVLVALLVCLIPTTIGGLLSAIGIAG-MDRV----------LQANVIATSGRAVEAAGDVDTL 301 (679)
T ss_pred -------------hHHHHHHHHHHHHcccchhhhHHHHHHHHH-HHHH----------hcCCeeecCchHHHHhcCCCEE
Confidence 015667788999999999998888887777 7777 7899999999999999999999
Q ss_pred EecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhH
Q 001087 355 FSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDAC 434 (1159)
Q Consensus 355 ~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (1159)
|+|||||||+|+|++.+++..+. ...
T Consensus 302 ~~DKTGTLT~g~~~v~~~~~~~~------------------------------------------------------~~~ 327 (679)
T PRK01122 302 LLDKTGTITLGNRQASEFLPVPG------------------------------------------------------VTE 327 (679)
T ss_pred EEeCCCCCcCCcEEEEEEEeCCC------------------------------------------------------CCH
Confidence 99999999999999988743110 001
Q ss_pred HHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHH-cCcEEEeecCceEEEEeccccccCccceEEEEEeEee
Q 001087 435 KEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKN-FGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVL 513 (1159)
Q Consensus 435 ~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~-~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~ 513 (1159)
++++.+.++|+.. ..||...|++++|++ .|+.. .+..++..+..
T Consensus 328 ~~ll~~a~~~s~~--------------s~hP~~~AIv~~a~~~~~~~~---------------------~~~~~~~~~~~ 372 (679)
T PRK01122 328 EELADAAQLSSLA--------------DETPEGRSIVVLAKQRFNLRE---------------------RDLQSLHATFV 372 (679)
T ss_pred HHHHHHHHHhcCC--------------CCCchHHHHHHHHHhhcCCCc---------------------hhhccccceeE
Confidence 2455666666432 247999999999986 34321 01124556778
Q ss_pred cCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHH
Q 001087 514 EFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKF 593 (1159)
Q Consensus 514 ~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~ 593 (1159)
||++.+|+|++.+. | ..|+|||++.+++.|...+.+.+++..+.+++++++|+|++++|+
T Consensus 373 pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~--------------- 432 (679)
T PRK01122 373 PFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAE--------------- 432 (679)
T ss_pred eecCcCceEEEEEC---C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEE---------------
Confidence 99999998887652 4 578999999999999765545566778888999999999999994
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCc
Q 001087 594 IQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEM 673 (1159)
Q Consensus 594 ~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~ 673 (1159)
|++++|+++++|++|+|++++|++|+++||+++|+|||++.||.+||++||+.+
T Consensus 433 -----------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~--- 486 (679)
T PRK01122 433 -----------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD--- 486 (679)
T ss_pred -----------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE---
Confidence 678999999999999999999999999999999999999999999999999931
Q ss_pred eEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHh
Q 001087 674 KQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLS 753 (1159)
Q Consensus 674 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~ 753 (1159)
T Consensus 487 -------------------------------------------------------------------------------- 486 (679)
T PRK01122 487 -------------------------------------------------------------------------------- 486 (679)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-
Q 001087 754 LNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL- 831 (1159)
Q Consensus 754 ~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l- 831 (1159)
+++|++|+||.++|+.+ |+.|++|+|+|||+||+|||++|||||++ +|++. |+++||+++.++++.+..
T Consensus 487 ------v~A~~~PedK~~iV~~l-Q~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~ 557 (679)
T PRK01122 487 ------FLAEATPEDKLALIRQE-QAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIE 557 (679)
T ss_pred ------EEccCCHHHHHHHHHHH-HHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHH
Confidence 89999999999999999 68899999999999999999999999999 88888 999999999999998877
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 832 LLVHGRWSYLRICKVVLYFFYKNLTFTLTQ 861 (1159)
Q Consensus 832 ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~ 861 (1159)
++..||...-.-..+..|++...++-++..
T Consensus 558 av~~GR~~~~tr~~~~~f~~~n~~~~~~~i 587 (679)
T PRK01122 558 VVEIGKQLLMTRGALTTFSIANDVAKYFAI 587 (679)
T ss_pred HHHHHHHHHhhhHhhhhhhHHHHHHHHHHH
Confidence 799999999777778888887666544433
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-70 Score=662.17 Aligned_cols=510 Identities=18% Similarity=0.218 Sum_probs=405.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhHhhcc---c-eEEEee-CCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEE
Q 001087 46 VLLVSLIKEAWEDWKRFQNDMTINS---T-PVEVLQ-GQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCY 120 (1159)
Q Consensus 46 vl~vs~ik~~~ed~~r~~~d~~~n~---~-~~~V~r-~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~ 120 (1159)
.+++...-|.+.++|..++.+.+++ . .++|+| +|++++|+.++|+|||+|.|++||.||||++++++ .+.
T Consensus 76 ~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-----~~~ 150 (675)
T TIGR01497 76 TVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-----VAS 150 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-----cEE
Confidence 3445555577777777776555543 3 478885 89999999999999999999999999999999985 356
Q ss_pred EeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcE
Q 001087 121 IETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYI 200 (1159)
Q Consensus 121 Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i 200 (1159)
||||.|||||.|+.|.+++.. ..+|+||.+.+|. +
T Consensus 151 VDESaLTGES~PV~K~~g~~~------------------------~~V~aGT~v~~G~---------------------~ 185 (675)
T TIGR01497 151 VDESAITGESAPVIKESGGDF------------------------ASVTGGTRILSDW---------------------L 185 (675)
T ss_pred EEcccccCCCCceeecCCCCc------------------------ceeecCcEEEeeE---------------------E
Confidence 999999999999999986531 0258899888887 9
Q ss_pred EEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCC
Q 001087 201 IGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQ 277 (1159)
Q Consensus 201 ~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~ 277 (1159)
.++|+.+|.+|.+ ....+.++.++||+|..++.+..++.++.++++++.. .+..+..
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~-~~~~~~~------------------- 245 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLW-PFAAYGG------------------- 245 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcC-------------------
Confidence 9999999999955 4444566777899999888877665444333322111 1111100
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEec
Q 001087 278 FNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSD 357 (1159)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sD 357 (1159)
. ...+...+.+++.+||++|......+...+ +.++ .++++++|+...+|.||++|+||||
T Consensus 246 ---~------~~~~~~lvallV~aiP~aLg~l~~av~iag-~~r~----------ar~gvLvK~~~avE~lg~v~~I~~D 305 (675)
T TIGR01497 246 ---N------AISVTVLVALLVCLIPTTIGGLLSAIGIAG-MDRV----------LGFNVIATSGRAVEACGDVDTLLLD 305 (675)
T ss_pred ---h------hHHHHHHHHHHHHhCchhhhhHHHHHHHHH-HHHH----------HHCCeEeeCcHHHHHhhCCCEEEEC
Confidence 0 014555688899999997766555555556 6666 7899999999999999999999999
Q ss_pred CCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHH
Q 001087 358 KTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEF 437 (1159)
Q Consensus 358 KTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (1159)
||||||+|+|++.+++..+. ...+++
T Consensus 306 KTGTLT~g~~~v~~~~~~~~------------------------------------------------------~~~~~l 331 (675)
T TIGR01497 306 KTGTITLGNRLASEFIPAQG------------------------------------------------------VDEKTL 331 (675)
T ss_pred CCCcccCCCeEEEEEEecCC------------------------------------------------------CcHHHH
Confidence 99999999999998753110 011245
Q ss_pred HHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCC
Q 001087 438 FRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNS 517 (1159)
Q Consensus 438 ~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s 517 (1159)
+...++|+.. +.||.+.|++++|++.|.... ...++..+..||++
T Consensus 332 l~~aa~~~~~--------------s~hP~a~Aiv~~a~~~~~~~~---------------------~~~~~~~~~~pf~~ 376 (675)
T TIGR01497 332 ADAAQLASLA--------------DDTPEGKSIVILAKQLGIRED---------------------DVQSLHATFVEFTA 376 (675)
T ss_pred HHHHHHhcCC--------------CCCcHHHHHHHHHHHcCCCcc---------------------ccccccceEEEEcC
Confidence 5666666432 258999999999998775321 11234456789999
Q ss_pred CCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHH
Q 001087 518 TRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAK 597 (1159)
Q Consensus 518 ~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~ 597 (1159)
.+|+|++.+. +| ..++|||++.+.+.|...+...++.+.+.+++++++|+|++++|+
T Consensus 377 ~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~------------------- 433 (675)
T TIGR01497 377 QTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE------------------- 433 (675)
T ss_pred CCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEE-------------------
Confidence 9887776553 44 478999999999988765444556678888999999999999995
Q ss_pred hhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEE
Q 001087 598 SSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFI 677 (1159)
Q Consensus 598 ~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~ 677 (1159)
|.+++|+++++|++|+|++++|++|+++||+++|+|||+..||.++|+++|+.+
T Consensus 434 -------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~------- 487 (675)
T TIGR01497 434 -------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD------- 487 (675)
T ss_pred -------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-------
Confidence 458999999999999999999999999999999999999999999999999831
Q ss_pred EecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCC
Q 001087 678 ITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCS 757 (1159)
Q Consensus 678 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~ 757 (1159)
T Consensus 488 -------------------------------------------------------------------------------- 487 (675)
T TIGR01497 488 -------------------------------------------------------------------------------- 487 (675)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhh
Q 001087 758 SVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVH 835 (1159)
Q Consensus 758 ~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~ 835 (1159)
+++|++|+||..+|+.+ |+.|+.|+|+|||.||+|||++|||||++ +|++. |+++||+++.++++.+.. ++.+
T Consensus 488 --v~a~~~PedK~~~v~~l-q~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~--akeaadivLldd~~s~Iv~av~~ 562 (675)
T TIGR01497 488 --FIAEATPEDKIALIRQE-QAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSDPTKLIEVVHI 562 (675)
T ss_pred --EEcCCCHHHHHHHHHHH-HHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEECCCCHHHHHHHHHH
Confidence 78999999999999999 67889999999999999999999999999 66777 899999999999998877 7999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001087 836 GRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQT 868 (1159)
Q Consensus 836 Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~ 868 (1159)
||..+-....+..|++..+++-++..+-..|..
T Consensus 563 GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~~~ 595 (675)
T TIGR01497 563 GKQLLITRGALTTFSIANDVAKYFAIIPAIFAA 595 (675)
T ss_pred HHHHHHHHHHHheeeecccHHHHHHHHHHHHHh
Confidence 999999999999999999988777655444443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-70 Score=625.92 Aligned_cols=863 Identities=19% Similarity=0.233 Sum_probs=536.0
Q ss_pred Hhh-hhhhHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhc--cceEEEeeCCeEEEeec
Q 001087 10 CLN-RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTIN--STPVEVLQGQRWVSIPW 86 (1159)
Q Consensus 10 L~~-~~~~n~yfl~i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n--~~~~~V~r~g~~~~i~~ 86 (1159)
||. |-.+.+|.+.+.+..+|-+.. .||.+++.|++++.+-+. -..+..+..+..+.+. +..+.|+|+++|+.+..
T Consensus 191 LFkE~A~aPfFVFQVFcvgLWCLDe-yWYySlFtLfMli~fE~t-lV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~s 268 (1160)
T KOG0209|consen 191 LFKEHAVAPFFVFQVFCVGLWCLDE-YWYYSLFTLFMLIAFEAT-LVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMS 268 (1160)
T ss_pred HHHHhccCceeeHhHHhHHHHHhHH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCCceEEEEEecCcceeccc
Confidence 566 888888888888887776544 477787777776665332 1222223333334443 45678999999999999
Q ss_pred cCcccceEEEEcc---CCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCC
Q 001087 87 RKLQVGDIVMVKQ---DGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPN 163 (1159)
Q Consensus 87 ~~l~vGDIV~v~~---ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn 163 (1159)
+||.|||+|.|.. +..+|||++||. |.|.||||+|||||.|..|.+++... .++. +..+...
T Consensus 269 eeLlPgDvVSI~r~~ed~~vPCDllLL~-----GsciVnEaMLtGESvPl~KE~Ie~~~----~d~~------ld~~~d~ 333 (1160)
T KOG0209|consen 269 EELLPGDVVSIGRGAEDSHVPCDLLLLR-----GSCIVNEAMLTGESVPLMKESIELRD----SDDI------LDIDRDD 333 (1160)
T ss_pred cccCCCceEEeccCcccCcCCceEEEEe-----cceeechhhhcCCCccccccccccCC----hhhh------ccccccc
Confidence 9999999999987 778999999997 77889999999999999999987552 2222 2223334
Q ss_pred CCcceeEEEEEEcCccccCCCCceeeccceeec-CCcEEEEEEEeccch---hhhhccCCCCCCcCHHHHHHHHHHHHHH
Q 001087 164 NSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRN-TEYIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALF 239 (1159)
Q Consensus 164 ~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~n-t~~i~gvVv~tG~~T---k~~~n~~~~~~k~s~l~~~~n~~~~~l~ 239 (1159)
+....|.||.+++-..-+ -++++. .+-+.+.|++||.|| |+++.......+-|.-.+ + ..+++
T Consensus 334 k~hVlfGGTkivQht~p~---------~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTaNn~--E--tf~FI 400 (1160)
T KOG0209|consen 334 KLHVLFGGTKIVQHTPPK---------KASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTANNR--E--TFIFI 400 (1160)
T ss_pred ceEEEEcCceEEEecCCc---------cccccCCCCCeEEEEEeccccccCCceeeeEEecceeeeeccH--H--HHHHH
Confidence 556789999888643100 111221 234899999999999 344333222222222111 2 22233
Q ss_pred HHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhh
Q 001087 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQST 319 (1159)
Q Consensus 240 ~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~ 319 (1159)
+++++++++.+ +++|.... -+|... --..|+-...++...||.-||+-++++--.. .
T Consensus 401 LFLlVFAiaAa--~Yvwv~Gs-----------------kd~~Rs---rYKL~LeC~LIlTSVvPpELPmELSmAVNsS-L 457 (1160)
T KOG0209|consen 401 LFLLVFAIAAA--GYVWVEGS-----------------KDPTRS---RYKLFLECTLILTSVVPPELPMELSMAVNSS-L 457 (1160)
T ss_pred HHHHHHHHHhh--heEEEecc-----------------cCcchh---hhheeeeeeEEEeccCCCCCchhhhHHHHHH-H
Confidence 33333333332 33343211 011110 0114555677788899999997766654333 2
Q ss_pred hhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCc
Q 001087 320 QYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIP 399 (1159)
Q Consensus 320 ~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~ 399 (1159)
..+ ++.++.|-.+=.+.-.|+||..|||||||||+..|.|..+- |..-..+ ..
T Consensus 458 ~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gva--g~~~~~~--~~------------- 510 (1160)
T KOG0209|consen 458 IAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVA--GLSADEG--AL------------- 510 (1160)
T ss_pred HHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEEecc--cccCCcc--cc-------------
Confidence 333 56677777777778899999999999999999999998762 2110000 00
Q ss_pred ccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCc
Q 001087 400 EVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGF 479 (1159)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~ 479 (1159)
.+-++.-.+-.+.+|.||+...-.++ --|+|.|.|.+++ .|+
T Consensus 511 ----------------------------~~~s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W 552 (1160)
T KOG0209|consen 511 ----------------------------TPASKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGW 552 (1160)
T ss_pred ----------------------------cchhhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCc
Confidence 00001112346789999998765433 3489999999987 677
Q ss_pred EEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCC----CcEEEEEecchhHHHHHhhcCChhh
Q 001087 480 FFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD----GRLVLYCKGADSVIYERLANGNEDL 555 (1159)
Q Consensus 480 ~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~----g~~~l~~KGA~~~i~~~~~~~~~~~ 555 (1159)
.+...+ .+..++. .....+|.+.+.|+|..|||||++...+ -+++..+|||||+|.+++.. .
T Consensus 553 ~~~k~~--~v~p~~~--------~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----v 618 (1160)
T KOG0209|consen 553 NLEKKN--SVCPREG--------NGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----V 618 (1160)
T ss_pred ccccCc--ccCCCcC--------CCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----C
Confidence 654322 1111111 1235788999999999999999997643 36899999999999999974 5
Q ss_pred HHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChH
Q 001087 556 KKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVP 635 (1159)
Q Consensus 556 ~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~ 635 (1159)
++++++...+|+++|.|||++|||.+..--.++ .| |.-+|.+|.||+|.|++.+.-||++|++
T Consensus 619 P~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q-------------~r----d~~Re~vEsdLtFaGFlif~CPlK~Ds~ 681 (1160)
T KOG0209|consen 619 PKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQ-------------VR----DLKREDVESDLTFAGFLIFSCPLKPDSK 681 (1160)
T ss_pred chhHHHHHHHHhhccceEEEEecccccccchhh-------------hh----hhhhhhhhhcceeeeeEEEeCCCCccHH
Confidence 667778889999999999999999997422111 11 1234789999999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHH
Q 001087 636 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDE 715 (1159)
Q Consensus 636 etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (1159)
++|+.|++++.++.|+||||+.||.++|+++|+..+...++.+..+.......-...|. .+.-.....-.
T Consensus 682 ~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~-t~~lp~~p~~~--------- 751 (1160)
T KOG0209|consen 682 KTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDG-TIVLPLKPGKK--------- 751 (1160)
T ss_pred HHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCC-ceeecCCCCcc---------
Confidence 99999999999999999999999999999999998876665555443211110000000 00000000000
Q ss_pred hhhhccccCCCceEEEEcccchhHhcchhH-HHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCH
Q 001087 716 AQQYIHSISGEKLALIIDGKCLMYALDPSL-RVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDV 794 (1159)
Q Consensus 716 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~-~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv 794 (1159)
...--..+.|.|+|.+|+++...+. ...+. +.-||||++|.||..|+..+ ++.|+.|||||||.|||
T Consensus 752 -----~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~------hv~VfARvaP~QKE~ii~tl-K~~Gy~TLMCGDGTNDV 819 (1160)
T KOG0209|consen 752 -----KTLLAETHDLCITGSALDHLQATDQLRRLIP------HVWVFARVAPKQKEFIITTL-KKLGYVTLMCGDGTNDV 819 (1160)
T ss_pred -----chhhhhhhhhhcchhHHHHHhhhHHHHHhhh------heeEEEeeChhhHHHHHHHH-HhcCeEEEEecCCCcch
Confidence 0000134578999999999987663 33333 34599999999999999999 68999999999999999
Q ss_pred HHHHhcccceee-cCccch---------------h---------------------------------------------
Q 001087 795 SMIQAAHIGVGI-SGQEGM---------------Q--------------------------------------------- 813 (1159)
Q Consensus 795 ~mL~~AdVGIgi-sg~e~~---------------q--------------------------------------------- 813 (1159)
+|||+|||||++ .+.+.+ .
T Consensus 820 GALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~ 899 (1160)
T KOG0209|consen 820 GALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDK 899 (1160)
T ss_pred hhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcc
Confidence 999999999987 443200 0
Q ss_pred ---------hhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHH
Q 001087 814 ---------AVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSL 883 (1159)
Q Consensus 814 ---------A~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~~~~~~l~~ 883 (1159)
|..||.|.----+..... ++..||......-++ ||-.++-...-.|+..--+---.=|.+.|.+.
T Consensus 900 ~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQM-----fKILALN~LisAYslSvlyldGVKfgD~QaTi 974 (1160)
T KOG0209|consen 900 GDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQM-----FKILALNCLISAYSLSVLYLDGVKFGDTQATI 974 (1160)
T ss_pred cCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHH-----HHHHHHHHHHHHHHHHHhhhcCceecchhHhH
Confidence 112222222111122222 578899887665444 44444444433343321111111256677666
Q ss_pred HHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hccCCccCCC---C
Q 001087 884 YNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSATGQNSS---G 959 (1159)
Q Consensus 884 ~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~~~~~~~~---g 959 (1159)
--++.. +.++.+....+=+. |-++.|...+||...+...+.+-+.|-..++++.- +......... -
T Consensus 975 sGlLla---~cFlfISrskPLet-------LSkeRP~~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~ 1044 (1160)
T KOG0209|consen 975 SGLLLA---ACFLFISRSKPLET-------LSKERPLPNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLE 1044 (1160)
T ss_pred HHHHHH---HHHhheecCCchhh-------HhhcCCCCCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChh
Confidence 555432 33333333322233 33344456789999998888888888887777766 3322211110 1
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHh--hccc--hhhHHHHHHHHHHHHHH-HHHHHhhccCCCCCCCceeeEeeeec-
Q 001087 960 KIFGIWDVSTMAFTCVVVTVNLRLLMM--CNTI--TRFHYITVGGSILAWFL-FVFLYTGIMTPNDRQENVFFVIFVLM- 1033 (1159)
Q Consensus 960 ~~~~~~~~~~~~~~~~v~~~~~~~~l~--~~~~--~~~~~~~i~~si~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 1033 (1159)
...+...+.+.+|......+....+.. -+.| +...+..+..+++.... +..+..-.. +.+...++.+
T Consensus 1045 ~~F~PsllNt~vyiisl~~QvsTFAVNY~G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~-------peLn~~~~lV~ 1117 (1160)
T KOG0209|consen 1045 EKFSPSLLNTTVYIISLAQQVSTFAVNYQGRPFRESLRENKGLLYGLLGSAGVIIALATGSS-------PELNEKFELVD 1117 (1160)
T ss_pred cccChhhhhhHHHHHHHHHHHHHhhhhccCcchhhhhhhccchHHHHHHHHHHHHHHHhccC-------hhHHhheeeec
Confidence 112222344555544333222222211 1112 12234444444443322 222222111 4455666666
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 001087 1034 STFYFYFTLILVPVLALLGDFIFQGVQRWFSP 1065 (1159)
Q Consensus 1034 ~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~~p 1065 (1159)
..-.|-..++.+.++-++..+++.-+.+++++
T Consensus 1118 mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~ 1149 (1160)
T KOG0209|consen 1118 MPQDFKIKLLAVLVLDFVLCYLVERVLKFFFG 1149 (1160)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 44456666666666666666777666667766
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-68 Score=646.84 Aligned_cols=477 Identities=31% Similarity=0.449 Sum_probs=401.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhHhhccceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCe
Q 001087 39 NVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 118 (1159)
Q Consensus 39 ~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~ 118 (1159)
.+++++..++....+...++..+...++.+++++++|+|+| ++++++++|+|||+|.|++||.+|||++++++ .
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-----~ 76 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-----S 76 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-----c
Confidence 45667777777777777777777777777899999999999 99999999999999999999999999999985 5
Q ss_pred EEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCC
Q 001087 119 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 198 (1159)
Q Consensus 119 ~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 198 (1159)
|+||||+|||||.|+.|++++. .|+|+.+.+|.
T Consensus 77 ~~vdes~LTGEs~pv~k~~g~~---------------------------v~~gs~~~~G~-------------------- 109 (499)
T TIGR01494 77 CFVDESNLTGESVPVLKTAGDA---------------------------VFAGTYVFNGT-------------------- 109 (499)
T ss_pred EEEEcccccCCCCCeeeccCCc---------------------------cccCcEEeccE--------------------
Confidence 7899999999999999998653 38888888887
Q ss_pred cEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCcc
Q 001087 199 YIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLI-LALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVE 274 (1159)
Q Consensus 199 ~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~-~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~ 274 (1159)
+.+.|..+|.+|.. ..........+++++++.+++. .++.++.++++++.++++.......
T Consensus 110 -~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~-------------- 174 (499)
T TIGR01494 110 -LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP-------------- 174 (499)
T ss_pred -EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc--------------
Confidence 88899999999854 3333344455789999999998 6777777777766665543321100
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEE
Q 001087 275 DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYI 354 (1159)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I 354 (1159)
. .+...+.+++++++.+|||+|+++++++...+ ..++ .++++++|+++.+|+||+++++
T Consensus 175 ------~----~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~-~~~~----------~~~gilvk~~~~lE~l~~v~~i 233 (499)
T TIGR01494 175 ------N----SIFKIFLRALILLVIAIPIALPLAVTIALAVG-DARL----------AKKGIVVRSLNALEELGKVDYI 233 (499)
T ss_pred ------c----cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH-HHHH----------HHCCcEEechhhhhhccCCcEE
Confidence 0 12347889999999999999999999999999 7777 6789999999999999999999
Q ss_pred EecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhH
Q 001087 355 FSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDAC 434 (1159)
Q Consensus 355 ~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (1159)
|||||||||+|+|+|.++++.+.
T Consensus 234 ~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------------------- 256 (499)
T TIGR01494 234 CSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------------------- 256 (499)
T ss_pred EeeCCCccccCceEEEEEEecCC---------------------------------------------------------
Confidence 99999999999999999864321
Q ss_pred HHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeec
Q 001087 435 KEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLE 514 (1159)
Q Consensus 435 ~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~ 514 (1159)
++.++||+|.|++++++..+ ++..|
T Consensus 257 ------------------------~~~s~hp~~~ai~~~~~~~~-------------------------------~~~~~ 281 (499)
T TIGR01494 257 ------------------------EYLSGHPDERALVKSAKWKI-------------------------------LNVFE 281 (499)
T ss_pred ------------------------CcCCCChHHHHHHHHhhhcC-------------------------------cceec
Confidence 01247999999999986421 13469
Q ss_pred CCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHH
Q 001087 515 FNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFI 594 (1159)
Q Consensus 515 F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~ 594 (1159)
|++.+|+|+++++.+++ .|+||+++.+.++|.. +.+.+++++.+|+|++++|++.
T Consensus 282 f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g~~~~~~a~~~-------------- 336 (499)
T TIGR01494 282 FSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSGLRVLAVASKE-------------- 336 (499)
T ss_pred cCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCCCEEEEEEECC--------------
Confidence 99999999999987444 4789999999988742 2344567889999999999742
Q ss_pred HHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCce
Q 001087 595 QAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK 674 (1159)
Q Consensus 595 ~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~ 674 (1159)
+++|+++++|++|++++++|+.|+++|+++||+|||+++||..+|+++|+
T Consensus 337 ------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi------ 386 (499)
T TIGR01494 337 ------------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI------ 386 (499)
T ss_pred ------------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc------
Confidence 69999999999999999999999999999999999999999999998864
Q ss_pred EEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhh
Q 001087 675 QFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSL 754 (1159)
Q Consensus 675 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~ 754 (1159)
T Consensus 387 -------------------------------------------------------------------------------- 386 (499)
T TIGR01494 387 -------------------------------------------------------------------------------- 386 (499)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccchh-hh
Q 001087 755 NCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL-LL 833 (1159)
Q Consensus 755 ~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~l-ll 833 (1159)
+||++|+||+++|+.+ |..|+.|+|+|||+||+|||++|||||++. |+.+||+++.++++.... ++
T Consensus 387 ------~~~~~p~~K~~~v~~l-~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~ 453 (499)
T TIGR01494 387 ------FARVTPEEKAALVEAL-QKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDAL 453 (499)
T ss_pred ------eeccCHHHHHHHHHHH-HHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHH
Confidence 4778999999999999 677899999999999999999999999994 688999999997776655 79
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 834 VHGRWSYLRICKVVLYFFYKNLTFTLTQFWF 864 (1159)
Q Consensus 834 ~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~ 864 (1159)
.+||+.++++++++.|.+++|++.....+++
T Consensus 454 ~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 454 KEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987776653
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-64 Score=611.21 Aligned_cols=524 Identities=20% Similarity=0.221 Sum_probs=412.5
Q ss_pred hhhhHHHHHHHHHHhh-cccccc--cccchhhhHHHHHHHHHHHHHHHHHHHhhhhHh------hccceEEEee-CCeEE
Q 001087 13 RRVANCYFLMISILST-TPMSPV--NPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQ-GQRWV 82 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~-i~~s~~--~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~------~n~~~~~V~r-~g~~~ 82 (1159)
++..|+-+|+...... +.++.+ -+..++.--++++++-.+.+++|++.+.|+.+. +.++++++++ ||+.+
T Consensus 144 ~~~~~md~Lv~la~~~A~~~s~~~~~~~~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~ 223 (713)
T COG2217 144 RGRLNMDTLVALATIGAYAYSLYATLFPVYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEE 223 (713)
T ss_pred cCCCChHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEE
Confidence 6667777776432221 111111 000222233445555566689999888876443 3468887776 45599
Q ss_pred EeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCC
Q 001087 83 SIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQP 162 (1159)
Q Consensus 83 ~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~p 162 (1159)
+++.++|++||+|.|++||+||+|++++++++ .||||+|||||.|+.|.+++..
T Consensus 224 ~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-----~vDeS~iTGEs~PV~k~~Gd~V--------------------- 277 (713)
T COG2217 224 EVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-----SVDESMLTGESLPVEKKPGDEV--------------------- 277 (713)
T ss_pred EEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-----EeecchhhCCCCCEecCCCCEE---------------------
Confidence 99999999999999999999999999998665 4999999999999999999855
Q ss_pred CCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHHHH
Q 001087 163 NNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALF 239 (1159)
Q Consensus 163 n~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~l~ 239 (1159)
|+||++.+|. +...|+.+|.||.+ .+..++++.+|+|+|+..|++..++.
T Consensus 278 ------~aGtiN~~G~---------------------l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fv 330 (713)
T COG2217 278 ------FAGTVNLDGS---------------------LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFV 330 (713)
T ss_pred ------eeeEEECCcc---------------------EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccH
Confidence 9999999998 99999999999954 55566888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhh
Q 001087 240 ATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQST 319 (1159)
Q Consensus 240 ~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~ 319 (1159)
++.++++++++++|.+.... .| -..+.+++.+++..|||+|.++.+++...+ .
T Consensus 331 p~vl~ia~l~f~~w~~~~~~-~~-------------------------~~a~~~a~avLVIaCPCALgLAtP~ai~~g-~ 383 (713)
T COG2217 331 PVVLVIAALTFALWPLFGGG-DW-------------------------ETALYRALAVLVIACPCALGLATPTAILVG-I 383 (713)
T ss_pred HHHHHHHHHHHHHHHHhcCC-cH-------------------------HHHHHHHHhheeeeCccHHHhHHHHHHHHH-H
Confidence 99999998887765444321 11 127888999999999999999999999998 7
Q ss_pred hhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCc
Q 001087 320 QYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIP 399 (1159)
Q Consensus 320 ~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~ 399 (1159)
... +++++++|+.+.+|.|+++|+|+||||||||+|+|++..+...+. +
T Consensus 384 g~a----------A~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~------------------- 432 (713)
T COG2217 384 GRA----------ARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D------------------- 432 (713)
T ss_pred HHH----------HhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C-------------------
Confidence 777 799999999999999999999999999999999999998854321 0
Q ss_pred ccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCc
Q 001087 400 EVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGF 479 (1159)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~ 479 (1159)
..+++...+. .+-.++||...|++++|++.|.
T Consensus 433 ----------------------------------e~~~L~laAa--------------lE~~S~HPiA~AIv~~a~~~~~ 464 (713)
T COG2217 433 ----------------------------------EDELLALAAA--------------LEQHSEHPLAKAIVKAAAERGL 464 (713)
T ss_pred ----------------------------------HHHHHHHHHH--------------HHhcCCChHHHHHHHHHHhcCC
Confidence 0122222221 1123689999999999998762
Q ss_pred EEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHH
Q 001087 480 FFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVT 559 (1159)
Q Consensus 480 ~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~ 559 (1159)
.-. .. ...+| ..++--+. +|+ .+.-|.+..+.+.-. .... .
T Consensus 465 ~~~----------------------~~---~~~i~------G~Gv~~~v-~g~--~v~vG~~~~~~~~~~----~~~~-~ 505 (713)
T COG2217 465 PDV----------------------ED---FEEIP------GRGVEAEV-DGE--RVLVGNARLLGEEGI----DLPL-L 505 (713)
T ss_pred CCc----------------------cc---eeeec------cCcEEEEE-CCE--EEEEcCHHHHhhcCC----Cccc-h
Confidence 100 00 11111 22222222 342 333488877754211 1111 4
Q ss_pred HHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHH
Q 001087 560 REHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIE 639 (1159)
Q Consensus 560 ~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~ 639 (1159)
.+..+.+..+|..++.++. |-+++|+++++|++|++++++|+
T Consensus 506 ~~~~~~~~~~G~t~v~va~--------------------------------------dg~~~g~i~~~D~~R~~a~~aI~ 547 (713)
T COG2217 506 SERIEALESEGKTVVFVAV--------------------------------------DGKLVGVIALADELRPDAKEAIA 547 (713)
T ss_pred hhhHHHHHhcCCeEEEEEE--------------------------------------CCEEEEEEEEeCCCChhHHHHHH
Confidence 5667788899998888884 56899999999999999999999
Q ss_pred HHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhh
Q 001087 640 TLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQY 719 (1159)
Q Consensus 640 ~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (1159)
.|++.||++.|||||++.||.+||+++||..
T Consensus 548 ~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------------------------------------- 578 (713)
T COG2217 548 ALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------------------------------------- 578 (713)
T ss_pred HHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-------------------------------------------------
Confidence 9999999999999999999999999999921
Q ss_pred ccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHh
Q 001087 720 IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQA 799 (1159)
Q Consensus 720 ~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~ 799 (1159)
+.+.+.|+||+++|+.+ |..|++|+|||||+||+|||.+
T Consensus 579 ----------------------------------------v~AellPedK~~~V~~l-~~~g~~VamVGDGINDAPALA~ 617 (713)
T COG2217 579 ----------------------------------------VRAELLPEDKAEIVREL-QAEGRKVAMVGDGINDAPALAA 617 (713)
T ss_pred ----------------------------------------heccCCcHHHHHHHHHH-HhcCCEEEEEeCCchhHHHHhh
Confidence 88999999999999999 6789999999999999999999
Q ss_pred cccceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 800 AHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWF 864 (1159)
Q Consensus 800 AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~ 864 (1159)
|||||+| +|+|. |.++||+++.+.+..... ++..+|..+++|++++.|.|.+|.+++.+..+.
T Consensus 618 AdVGiAmG~GtDv--A~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 618 ADVGIAMGSGTDV--AIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred cCeeEeecCCcHH--HHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999 78999 999999999999887766 799999999999999999999999887665543
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-64 Score=563.92 Aligned_cols=554 Identities=19% Similarity=0.240 Sum_probs=422.4
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhh---ccceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEE
Q 001087 34 VNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTI---NSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFL 110 (1159)
Q Consensus 34 ~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~---n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL 110 (1159)
..|..... ++..+++++...++|+++.-..-.++ -..+++|+|||+|.+++...|+||||+.++.|+.+|||++||
T Consensus 95 ~DW~DF~g-I~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl 173 (942)
T KOG0205|consen 95 PDWQDFVG-ICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLL 173 (942)
T ss_pred cchhhhhh-hheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCcccee
Confidence 34544433 34445555556778887766553333 357899999999999999999999999999999999999999
Q ss_pred eecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeec
Q 001087 111 ASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLR 190 (1159)
Q Consensus 111 ~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llr 190 (1159)
.+.-++ ||+|.|||||.|+.|.+++++ |+|+.+-+|+
T Consensus 174 ~gD~Lk----iDQSAlTGESLpvtKh~gd~v---------------------------fSgSTcKqGE------------ 210 (942)
T KOG0205|consen 174 EGDPLK----IDQSALTGESLPVTKHPGDEV---------------------------FSGSTCKQGE------------ 210 (942)
T ss_pred cCCccc----cchhhhcCCccccccCCCCce---------------------------ecccccccce------------
Confidence 998776 999999999999999999866 9999999988
Q ss_pred cceeecCCcEEEEEEEeccchhhhhccC--CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccC
Q 001087 191 GCSLRNTEYIIGAVIFAGHETKVMMNSM--NIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHN 268 (1159)
Q Consensus 191 Gs~l~nt~~i~gvVv~tG~~Tk~~~n~~--~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~ 268 (1159)
+.+||++||..|-.++.+. .+.....++++.++-+..++.+.+. +.+++-+...++.... -|-
T Consensus 211 ---------~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~-~g~lie~~vmy~~q~R-~~r---- 275 (942)
T KOG0205|consen 211 ---------IEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIA-LGMLIEITVMYPIQHR-LYR---- 275 (942)
T ss_pred ---------EEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhhh-hhh----
Confidence 9999999999996654432 2355678999999998776654332 2222222222222111 000
Q ss_pred CCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccc
Q 001087 269 MGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEEL 348 (1159)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~L 348 (1159)
...-+.+++++.-||++||..+++..+++ +.++ ++++++++..+++|+|
T Consensus 276 --------------------~~i~nLlvllIGgiPiamPtVlsvTMAiG-s~rL----------aqqgAItkrmtAIEem 324 (942)
T KOG0205|consen 276 --------------------DGIDNLLVLLIGGIPIAMPTVLSVTMAIG-SHRL----------SQQGAITKRMTAIEEM 324 (942)
T ss_pred --------------------hhhhheheeeecccccccceeeeehhhHH-HHHH----------HhcccHHHHHHHHHHh
Confidence 02223455666779999999999999999 8888 7899999999999999
Q ss_pred cCceEEEecCCCCCCCCceEEEE----EEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhcc
Q 001087 349 GQVEYIFSDKTGTLTRNLMEFFK----CSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGA 424 (1159)
Q Consensus 349 G~V~~I~sDKTGTLT~n~m~~~~----~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (1159)
+.+|++|||||||||.|++.+.+ ++..| ...
T Consensus 325 AGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g------------------------------------v~~--------- 359 (942)
T KOG0205|consen 325 AGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG------------------------------------VDK--------- 359 (942)
T ss_pred hCceEEeecCcCceeecceecCcCcceeeecC------------------------------------CCh---------
Confidence 99999999999999999998865 11111 111
Q ss_pred ccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccce
Q 001087 425 WRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQD 504 (1159)
Q Consensus 425 ~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~ 504 (1159)
++.++..|.. ... +..+..+.|++...++- +...
T Consensus 360 ----------D~~~L~A~rA--sr~-----------en~DAID~A~v~~L~dP-----------------------Kear 393 (942)
T KOG0205|consen 360 ----------DDVLLTAARA--SRK-----------ENQDAIDAAIVGMLADP-----------------------KEAR 393 (942)
T ss_pred ----------HHHHHHHHHH--hhh-----------cChhhHHHHHHHhhcCH-----------------------HHHh
Confidence 1222222222 111 12567888998875430 1135
Q ss_pred EEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHH
Q 001087 505 VCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPD 584 (1159)
Q Consensus 505 ~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~ 584 (1159)
..|+.++.+|||+..||-...+.+|||+....+||||+.|++.|.... +.++...+.+++||+.|+|.|++|++..++.
T Consensus 394 a~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~-~i~~~vh~~id~~AeRGlRSLgVArq~v~e~ 472 (942)
T KOG0205|consen 394 AGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH-DIPERVHSIIDKFAERGLRSLAVARQEVPEK 472 (942)
T ss_pred hCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC-cchHHHHHHHHHHHHhcchhhhhhhhccccc
Confidence 678999999999999999999999999999999999999999998754 6888999999999999999999999988764
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHH
Q 001087 585 MYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAY 664 (1159)
Q Consensus 585 e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~ 664 (1159)
.- +.-..-.+++|..-+-||+|.+..+||..-...|..|.|+|||...-|...++
T Consensus 473 ~~-------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgr 527 (942)
T KOG0205|consen 473 TK-------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 527 (942)
T ss_pred cc-------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhh
Confidence 21 11235678999999999999999999999999999999999999999999999
Q ss_pred HcCccccCce---EEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhc
Q 001087 665 ACNLINNEMK---QFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYAL 741 (1159)
Q Consensus 665 ~~gl~~~~~~---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l 741 (1159)
.+|+-++-.+ +...+.++ -+.|.......
T Consensus 528 rlgmgtnmypss~llG~~~~~------------------------------------------------~~~~~~v~eli 559 (942)
T KOG0205|consen 528 RLGMGTNMYPSSALLGLGKDG------------------------------------------------SMPGSPVDELI 559 (942)
T ss_pred hhccccCcCCchhhccCCCCC------------------------------------------------CCCCCcHHHHh
Confidence 9988654221 00000000 01111111111
Q ss_pred chhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceeecCccchhhhhcccee
Q 001087 742 DPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFA 821 (1159)
Q Consensus 742 ~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~ 821 (1159)
+ ++.=|+.+-|+||..+|+.+ |.+|++++|+|||+||+|+|+.||+||++.+.-.. |..+||++
T Consensus 560 ---------e-----~adgfAgVfpehKy~iV~~L-q~r~hi~gmtgdgvndapaLKkAdigiava~atda-ar~asdiV 623 (942)
T KOG0205|consen 560 ---------E-----KADGFAGVFPEHKYEIVKIL-QERKHIVGMTGDGVNDAPALKKADIGIAVADATDA-ARSASDIV 623 (942)
T ss_pred ---------h-----hccCccccCHHHHHHHHHHH-hhcCceecccCCCcccchhhcccccceeeccchhh-hcccccEE
Confidence 1 23478999999999999999 88999999999999999999999999999554332 78899999
Q ss_pred eccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 001087 822 IAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFT 858 (1159)
Q Consensus 822 i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~ 858 (1159)
+..-....+. .+..+|.+|+|+.....|.+.-.+-.+
T Consensus 624 ltepglSviI~avltSraIfqrmknytiyavsitiriv 661 (942)
T KOG0205|consen 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661 (942)
T ss_pred EcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHH
Confidence 9998887776 688999999999999888876665443
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-61 Score=599.45 Aligned_cols=485 Identities=20% Similarity=0.236 Sum_probs=387.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHh------hccceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCe
Q 001087 45 LVLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 118 (1159)
Q Consensus 45 ~vl~vs~ik~~~ed~~r~~~d~~------~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~ 118 (1159)
+++++..+.+.+|++.++|+.+. +++.+++|+|+|++++++.++|+|||+|.|++||.||||+++++++
T Consensus 211 ~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~----- 285 (741)
T PRK11033 211 MVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPF----- 285 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECc-----
Confidence 44445556688888877776543 3467899999999999999999999999999999999999999854
Q ss_pred EEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCC
Q 001087 119 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 198 (1159)
Q Consensus 119 ~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 198 (1159)
+.||||.|||||.|+.|++++. +|+|+++.+|.
T Consensus 286 ~~vdes~lTGEs~Pv~k~~Gd~---------------------------V~aGt~~~~G~-------------------- 318 (741)
T PRK11033 286 ASFDESALTGESIPVERATGEK---------------------------VPAGATSVDRL-------------------- 318 (741)
T ss_pred EEeecccccCCCCCEecCCCCe---------------------------eccCCEEcCce--------------------
Confidence 4699999999999999998763 49999999988
Q ss_pred cEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccC
Q 001087 199 YIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVED 275 (1159)
Q Consensus 199 ~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~ 275 (1159)
+.+.|+.+|.+|.+ .+...+++.+++|+|+.+|++..++.+++++++++.++++.++... +|
T Consensus 319 -~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~-~~------------- 383 (741)
T PRK11033 319 -VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA-PW------------- 383 (741)
T ss_pred -EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CH-------------
Confidence 99999999999954 4445677778999999999999999999999998887765332211 11
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEE
Q 001087 276 DQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIF 355 (1159)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~ 355 (1159)
-..+.+++.+++..|||+|.++.+++.... .... +++++++|+.+.+|.|++||+||
T Consensus 384 ------------~~~i~~a~svlviacPcaL~latP~a~~~~-l~~a----------ar~gilik~~~alE~l~~v~~v~ 440 (741)
T PRK11033 384 ------------QEWIYRGLTLLLIGCPCALVISTPAAITSG-LAAA----------ARRGALIKGGAALEQLGRVTTVA 440 (741)
T ss_pred ------------HHHHHHHHHHHHHhchhhhhhhhHHHHHHH-HHHH----------HHCCeEEcCcHHHHHhhCCCEEE
Confidence 115667889999999999977777776666 4444 68899999999999999999999
Q ss_pred ecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHH
Q 001087 356 SDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACK 435 (1159)
Q Consensus 356 sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1159)
||||||||+|+|++.++...+. + ...
T Consensus 441 fDKTGTLT~g~~~v~~~~~~~~-~-----------------------------------------------------~~~ 466 (741)
T PRK11033 441 FDKTGTLTEGKPQVTDIHPATG-I-----------------------------------------------------SES 466 (741)
T ss_pred EeCCCCCcCCceEEEEEEecCC-C-----------------------------------------------------CHH
Confidence 9999999999999998753211 0 001
Q ss_pred HHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecC
Q 001087 436 EFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEF 515 (1159)
Q Consensus 436 ~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F 515 (1159)
+++...+. + + ..+.||.+.|+++++++.|.. +||
T Consensus 467 ~~l~~aa~---~--e---------~~s~hPia~Ai~~~a~~~~~~--------------------------------~~~ 500 (741)
T PRK11033 467 ELLALAAA---V--E---------QGSTHPLAQAIVREAQVRGLA--------------------------------IPE 500 (741)
T ss_pred HHHHHHHH---H--h---------cCCCCHHHHHHHHHHHhcCCC--------------------------------CCC
Confidence 22222221 1 1 124799999999999876542 345
Q ss_pred CCCCceEE---EEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHH
Q 001087 516 NSTRKRQS---VVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEK 592 (1159)
Q Consensus 516 ~s~rkrms---viv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~ 592 (1159)
.++++.+. +... -+|+.+ .-|+++.+.+ + .+...+.++++..+|+|++++|+
T Consensus 501 ~~~~~~~~g~Gv~~~-~~g~~~--~ig~~~~~~~-~-------~~~~~~~~~~~~~~g~~~v~va~-------------- 555 (741)
T PRK11033 501 AESQRALAGSGIEGQ-VNGERV--LICAPGKLPP-L-------ADAFAGQINELESAGKTVVLVLR-------------- 555 (741)
T ss_pred CcceEEEeeEEEEEE-ECCEEE--EEecchhhhh-c-------cHHHHHHHHHHHhCCCEEEEEEE--------------
Confidence 55555542 2112 244432 2388887754 1 12344556788999999999995
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccC
Q 001087 593 FIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNE 672 (1159)
Q Consensus 593 ~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~ 672 (1159)
|.+++|+++++|++|+|++++|+.|+++|++++|+|||+..+|..+|+++||.
T Consensus 556 ------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~--- 608 (741)
T PRK11033 556 ------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID--- 608 (741)
T ss_pred ------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---
Confidence 56899999999999999999999999999999999999999999999999982
Q ss_pred ceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHH
Q 001087 673 MKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNL 752 (1159)
Q Consensus 673 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l 752 (1159)
T Consensus 609 -------------------------------------------------------------------------------- 608 (741)
T PRK11033 609 -------------------------------------------------------------------------------- 608 (741)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh
Q 001087 753 SLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL 831 (1159)
Q Consensus 753 ~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l 831 (1159)
..++++|+||..+|+.++ + ++.|+|||||.||+|||++|||||++ +|++. |.++||+++.+.++....
T Consensus 609 -------~~~~~~p~~K~~~v~~l~-~-~~~v~mvGDgiNDapAl~~A~vgia~g~~~~~--a~~~adivl~~~~l~~l~ 677 (741)
T PRK11033 609 -------FRAGLLPEDKVKAVTELN-Q-HAPLAMVGDGINDAPAMKAASIGIAMGSGTDV--ALETADAALTHNRLRGLA 677 (741)
T ss_pred -------eecCCCHHHHHHHHHHHh-c-CCCEEEEECCHHhHHHHHhCCeeEEecCCCHH--HHHhCCEEEecCCHHHHH
Confidence 345678999999999995 3 35899999999999999999999998 56666 889999999988876665
Q ss_pred -hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 832 -LLVHGRWSYLRICKVVLYFFYKNLTFTLTQF 862 (1159)
Q Consensus 832 -ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~ 862 (1159)
++..||..+++|++++.|.+.+|+++..+.+
T Consensus 678 ~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 678 QMIELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999987765544
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-60 Score=558.05 Aligned_cols=505 Identities=19% Similarity=0.196 Sum_probs=401.7
Q ss_pred HHHHHHHHHHHHHhhhhH------hhccceEEEeeCCe-EEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEE
Q 001087 49 VSLIKEAWEDWKRFQNDM------TINSTPVEVLQGQR-WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYI 121 (1159)
Q Consensus 49 vs~ik~~~ed~~r~~~d~------~~n~~~~~V~r~g~-~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~V 121 (1159)
+.++.+.+|...++|+-. .+.+.++.++.+|+ .++|+.+.|++||+|+|.+|++||+|+++++ |.|+|
T Consensus 350 fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~-----Gss~V 424 (951)
T KOG0207|consen 350 FITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD-----GSSEV 424 (951)
T ss_pred HHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEe-----Cceee
Confidence 334557888888887633 34578899999986 8999999999999999999999999999998 55679
Q ss_pred eccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEE
Q 001087 122 ETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYII 201 (1159)
Q Consensus 122 dts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~ 201 (1159)
|||.+|||+.|+.|++++.. .+|+++.+|. .+
T Consensus 425 DEs~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~---------------------l~ 456 (951)
T KOG0207|consen 425 DESLITGESMPVPKKKGSTV---------------------------IAGSINLNGT---------------------LL 456 (951)
T ss_pred chhhccCCceecccCCCCee---------------------------eeeeecCCce---------------------EE
Confidence 99999999999999998844 8999999998 89
Q ss_pred EEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCC
Q 001087 202 GAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQF 278 (1159)
Q Consensus 202 gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~ 278 (1159)
.-++.+|.||.+ .+..++++..++|+|+.+|++..++.++++++++.++++|.+......||..
T Consensus 457 VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~------------- 523 (951)
T KOG0207|consen 457 VKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPR------------- 523 (951)
T ss_pred EEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcc-------------
Confidence 999999999954 5556788888999999999999999999999999999888877653333321
Q ss_pred CCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecC
Q 001087 279 NPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDK 358 (1159)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDK 358 (1159)
..+..+...|..++.+++.+|||+|.++.+.+.+.+ ..-- +.+|+++|..+.+|.+.+|++|.|||
T Consensus 524 ---~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmva-tgvg----------A~nGvLIKGge~LE~~hkv~tVvFDK 589 (951)
T KOG0207|consen 524 ---SFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVA-TGVG----------ATNGVLIKGGEALEKAHKVKTVVFDK 589 (951)
T ss_pred ---hhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEE-echh----------hhcceEEcCcHHHHHHhcCCEEEEcC
Confidence 111233457888999999999999999888766655 3333 68999999999999999999999999
Q ss_pred CCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHH
Q 001087 359 TGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFF 438 (1159)
Q Consensus 359 TGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1159)
|||||+|++.+.++.+-+.. -..++++
T Consensus 590 TGTLT~G~~~V~~~~~~~~~-----------------------------------------------------~~~~e~l 616 (951)
T KOG0207|consen 590 TGTLTEGKPTVVDFKSLSNP-----------------------------------------------------ISLKEAL 616 (951)
T ss_pred CCceecceEEEEEEEecCCc-----------------------------------------------------ccHHHHH
Confidence 99999999999988654321 0122333
Q ss_pred HHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCC
Q 001087 439 RCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNST 518 (1159)
Q Consensus 439 ~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~ 518 (1159)
...+.- | -.++||...|++++|++.+-. ++. -.++..-.|...
T Consensus 617 ~~v~a~-----E---------s~SeHPig~AIv~yak~~~~~-----~~~------------------~~~~~~~~~pg~ 659 (951)
T KOG0207|consen 617 ALVAAM-----E---------SGSEHPIGKAIVDYAKEKLVE-----PNP------------------EGVLSFEYFPGE 659 (951)
T ss_pred HHHHHH-----h---------cCCcCchHHHHHHHHHhcccc-----cCc------------------cccceeecccCC
Confidence 222211 1 124799999999999987611 000 011122223222
Q ss_pred CceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHh
Q 001087 519 RKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKS 598 (1159)
Q Consensus 519 rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~ 598 (1159)
.+...+.+ +++. .+-|.-+.+-. ++....++.++.+++-...|..+.++|.
T Consensus 660 g~~~~~~~---~~~~--i~iGN~~~~~r----~~~~~~~~i~~~~~~~e~~g~tvv~v~v-------------------- 710 (951)
T KOG0207|consen 660 GIYVTVTV---DGNE--VLIGNKEWMSR----NGCSIPDDILDALTESERKGQTVVYVAV-------------------- 710 (951)
T ss_pred CcccceEE---eeeE--EeechHHHHHh----cCCCCchhHHHhhhhHhhcCceEEEEEE--------------------
Confidence 22222222 2222 23377555533 2222345577778888899999999996
Q ss_pred hhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEE
Q 001087 599 SLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFII 678 (1159)
Q Consensus 599 ~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i 678 (1159)
|-++.|+++++|++|+|+..+|+.|++.||++.||||||..||.++|+++|+-
T Consensus 711 ------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--------- 763 (951)
T KOG0207|consen 711 ------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--------- 763 (951)
T ss_pred ------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc---------
Confidence 67899999999999999999999999999999999999999999999999951
Q ss_pred ecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCc
Q 001087 679 TSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSS 758 (1159)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~ 758 (1159)
T Consensus 764 -------------------------------------------------------------------------------- 763 (951)
T KOG0207|consen 764 -------------------------------------------------------------------------------- 763 (951)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhh
Q 001087 759 VVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHG 836 (1159)
Q Consensus 759 vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~G 836 (1159)
.|+|.+.|+||+++|+.+ |+.|+.|+|+|||.||+|||.+|||||+| .|++. |.++||+++...+....+ .+..+
T Consensus 764 ~V~aev~P~~K~~~Ik~l-q~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~v--AieaADIVLmrn~L~~v~~ai~LS 840 (951)
T KOG0207|consen 764 NVYAEVLPEQKAEKIKEI-QKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDV--AIEAADIVLMRNDLRDVPFAIDLS 840 (951)
T ss_pred eEEeccCchhhHHHHHHH-HhcCCcEEEEeCCCCccHHHHhhccceeeccccHH--HHhhCCEEEEccchhhhHHHHHHH
Confidence 299999999999999999 67789999999999999999999999999 77887 999999999999887776 68999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 837 RWSYLRICKVVLYFFYKNLTFTLTQF 862 (1159)
Q Consensus 837 r~~~~ri~~~i~~~~~kni~~~~~~~ 862 (1159)
|...+|++.++.|++.+|++.+.+..
T Consensus 841 rkt~~rIk~N~~~A~~yn~~~IpIAa 866 (951)
T KOG0207|consen 841 RKTVKRIKLNFVWALIYNLVGIPIAA 866 (951)
T ss_pred HHHHhhHHHHHHHHHHHHHhhhhhhe
Confidence 99999999999999999998655543
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-59 Score=571.42 Aligned_cols=490 Identities=20% Similarity=0.247 Sum_probs=382.7
Q ss_pred HHHHHHHHHHHHHHhhhhHh------hccceEEEeeCC-eEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEE
Q 001087 48 LVSLIKEAWEDWKRFQNDMT------INSTPVEVLQGQ-RWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCY 120 (1159)
Q Consensus 48 ~vs~ik~~~ed~~r~~~d~~------~n~~~~~V~r~g-~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~ 120 (1159)
++..+.++++.+.++++.+. .++..++|+|+| +++++++++|+|||+|.|++||.||||+++++++ +.
T Consensus 26 ~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g~-----~~ 100 (556)
T TIGR01525 26 FLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGE-----SE 100 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEecc-----eE
Confidence 33334456666666555443 345789999996 9999999999999999999999999999999854 56
Q ss_pred EeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcE
Q 001087 121 IETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYI 200 (1159)
Q Consensus 121 Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i 200 (1159)
||||.|||||.|+.|++++ .+|+||.+.+|. +
T Consensus 101 vdes~lTGEs~pv~k~~g~---------------------------~v~aGt~v~~g~---------------------~ 132 (556)
T TIGR01525 101 VDESALTGESMPVEKKEGD---------------------------EVFAGTINGDGS---------------------L 132 (556)
T ss_pred EeehhccCCCCCEecCCcC---------------------------EEeeceEECCce---------------------E
Confidence 9999999999999998765 359999998888 9
Q ss_pred EEEEEEeccchhhhh---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCC
Q 001087 201 IGAVIFAGHETKVMM---NSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQ 277 (1159)
Q Consensus 201 ~gvVv~tG~~Tk~~~---n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~ 277 (1159)
+++|+.||.+|.+.+ .....+.+++++++.++++..++.++.++++++.++.+.+...
T Consensus 133 ~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~------------------- 193 (556)
T TIGR01525 133 TIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA------------------- 193 (556)
T ss_pred EEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------------
Confidence 999999999996644 3345566789999999999999999888888887766543211
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEec
Q 001087 278 FNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSD 357 (1159)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sD 357 (1159)
. ..+..++.+++..||++|+++++++.... ..++ .++++++|+++.+|.||++|++|||
T Consensus 194 --~--------~~~~~~~~vlv~~~P~al~l~~~~~~~~~-~~~~----------~~~gilvk~~~~le~l~~v~~i~fD 252 (556)
T TIGR01525 194 --L--------GALYRALAVLVVACPCALGLATPVAILVA-IGVA----------ARRGILIKGGDALEKLAKVKTVVFD 252 (556)
T ss_pred --c--------hHHHHHHHHHhhccccchhehhHHHHHHH-HHHH----------HHCCceecCchHHHHhhcCCEEEEe
Confidence 0 26778899999999999999999999998 8877 7899999999999999999999999
Q ss_pred CCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHH
Q 001087 358 KTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEF 437 (1159)
Q Consensus 358 KTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (1159)
||||||+|+|++.++...+... . ...++
T Consensus 253 KTGTLT~~~~~v~~~~~~~~~~--------------------------------------------------~--~~~~~ 280 (556)
T TIGR01525 253 KTGTLTTGKPTVVDVEPLDDAS--------------------------------------------------I--SEEEL 280 (556)
T ss_pred CCCCCcCCceEEEEEEecCCCC--------------------------------------------------c--cHHHH
Confidence 9999999999999876432110 0 01122
Q ss_pred HHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCC
Q 001087 438 FRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNS 517 (1159)
Q Consensus 438 ~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s 517 (1159)
+...+.+. ..+.||.+.|+++++++.|..... .++ ...+
T Consensus 281 l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~~~~~~----------------------~~~-~~~~---- 319 (556)
T TIGR01525 281 LALAAALE--------------QSSSHPLARAIVRYAKKRGLELPK----------------------QED-VEEV---- 319 (556)
T ss_pred HHHHHHHh--------------ccCCChHHHHHHHHHHhcCCCccc----------------------ccC-eeEe----
Confidence 22222111 123699999999999987653210 000 0000
Q ss_pred CCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHH
Q 001087 518 TRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAK 597 (1159)
Q Consensus 518 ~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~ 597 (1159)
..++.+..+ +|. .-+..|+++.+ + .. ... .+...+.+++++.+|+|++.+|.
T Consensus 320 ~~~gi~~~~---~g~-~~~~lg~~~~~-~-~~--~~~-~~~~~~~~~~~~~~g~~~~~v~~------------------- 371 (556)
T TIGR01525 320 PGKGVEATV---DGQ-EEVRIGNPRLL-E-LA--AEP-ISASPDLLNEGESQGKTVVFVAV------------------- 371 (556)
T ss_pred cCCeEEEEE---CCe-eEEEEecHHHH-h-hc--CCC-chhhHHHHHHHhhCCcEEEEEEE-------------------
Confidence 112233222 231 12334776655 1 11 111 12234567788999999999984
Q ss_pred hhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcC-CeEEEEeCCcHhHHHHHHHHcCccccCceEE
Q 001087 598 SSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAG-IKIWVLTGDKMETAINIAYACNLINNEMKQF 676 (1159)
Q Consensus 598 ~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aG-IkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i 676 (1159)
|.+++|.+.++|+++||++++|+.|+++| ++++|+|||+..+|..+++++|+-.
T Consensus 372 -------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~------ 426 (556)
T TIGR01525 372 -------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE------ 426 (556)
T ss_pred -------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe------
Confidence 66899999999999999999999999999 9999999999999999999999821
Q ss_pred EEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcC
Q 001087 677 IITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNC 756 (1159)
Q Consensus 677 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~ 756 (1159)
T Consensus 427 -------------------------------------------------------------------------------- 426 (556)
T TIGR01525 427 -------------------------------------------------------------------------------- 426 (556)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeeccccccchh-hhh
Q 001087 757 SSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRFLTDL-LLV 834 (1159)
Q Consensus 757 ~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f~~l~~l-ll~ 834 (1159)
+|+++.|++|..+++.+ +..++.|+|+|||.||++|+++|||||++. +.+. ++.+||+++.+.++.... ++.
T Consensus 427 ---~f~~~~p~~K~~~v~~l-~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~--~~~~Ad~vi~~~~~~~l~~~i~ 500 (556)
T TIGR01525 427 ---VHAELLPEDKLAIVKEL-QEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDV--AIEAADIVLLNDDLSSLPTAID 500 (556)
T ss_pred ---eeccCCHHHHHHHHHHH-HHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHHHH
Confidence 78889999999999999 557789999999999999999999999874 4444 778999999988877766 799
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 835 HGRWSYLRICKVVLYFFYKNLTFTLTQF 862 (1159)
Q Consensus 835 ~Gr~~~~ri~~~i~~~~~kni~~~~~~~ 862 (1159)
.||..++++++++.|.+.+|++.+...+
T Consensus 501 ~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 501 LSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998865554
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-58 Score=559.81 Aligned_cols=476 Identities=20% Similarity=0.230 Sum_probs=375.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhHh------hccceEEEeeC-CeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCe
Q 001087 46 VLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQG-QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 118 (1159)
Q Consensus 46 vl~vs~ik~~~ed~~r~~~d~~------~n~~~~~V~r~-g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~ 118 (1159)
++++..+.+.+|++.++|+.+. +.+.+++|+|+ |++++|+.++|+|||+|.|++||.||||++++++ .
T Consensus 60 i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g-----~ 134 (562)
T TIGR01511 60 LITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEG-----E 134 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEEC-----c
Confidence 3333444577788766665443 34578899885 6779999999999999999999999999999985 4
Q ss_pred EEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCC
Q 001087 119 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 198 (1159)
Q Consensus 119 ~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 198 (1159)
+.||||.||||+.|+.|++++. +|+||++.+|.
T Consensus 135 ~~vdes~lTGEs~pv~k~~gd~---------------------------V~aGt~~~~g~-------------------- 167 (562)
T TIGR01511 135 SEVDESLVTGESLPVPKKVGDP---------------------------VIAGTVNGTGS-------------------- 167 (562)
T ss_pred eEEehHhhcCCCCcEEcCCCCE---------------------------EEeeeEECCce--------------------
Confidence 5699999999999999998773 49999999998
Q ss_pred cEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccC
Q 001087 199 YIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVED 275 (1159)
Q Consensus 199 ~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~ 275 (1159)
+++.|+.||.+|.+ .+....++.+++++++.++++..++.+++++++++.++.|.
T Consensus 168 -~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~--------------------- 225 (562)
T TIGR01511 168 -LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL--------------------- 225 (562)
T ss_pred -EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 99999999999955 44445667778999999999999999988888877655432
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEE
Q 001087 276 DQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIF 355 (1159)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~ 355 (1159)
..+.+++.+++..|||+|+++++++.... ..++ .++++++|+.+.+|.|+++|+||
T Consensus 226 -------------~~~~~~~svlvvacPcaL~la~p~a~~~~-~~~a----------a~~gIlik~~~~lE~l~~v~~i~ 281 (562)
T TIGR01511 226 -------------FALEFAVTVLIIACPCALGLATPTVIAVA-TGLA----------AKNGVLIKDGDALERAANIDTVV 281 (562)
T ss_pred -------------HHHHHHHHHHHHhccchhhhHHHHHHHHH-HHHH----------HHCCeEEcChHHHHHhhCCCEEE
Confidence 16777899999999999999999999998 7777 78999999999999999999999
Q ss_pred ecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHH
Q 001087 356 SDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACK 435 (1159)
Q Consensus 356 sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1159)
||||||||+|+|++.++...+.. . ..
T Consensus 282 fDKTGTLT~g~~~v~~i~~~~~~---------------------------------------------------~---~~ 307 (562)
T TIGR01511 282 FDKTGTLTQGKPTVTDVHVFGDR---------------------------------------------------D---RT 307 (562)
T ss_pred ECCCCCCcCCCEEEEEEecCCCC---------------------------------------------------C---HH
Confidence 99999999999999987432110 0 01
Q ss_pred HHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecC
Q 001087 436 EFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEF 515 (1159)
Q Consensus 436 ~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F 515 (1159)
+++..++. +. ..+.||.+.|+++++++.|..... + ..++ ..
T Consensus 308 ~~l~~aa~---~e-----------~~s~HPia~Ai~~~~~~~~~~~~~-------~-------------~~~~---~~-- 348 (562)
T TIGR01511 308 ELLALAAA---LE-----------AGSEHPLAKAIVSYAKEKGITLVE-------V-------------SDFK---AI-- 348 (562)
T ss_pred HHHHHHHH---Hh-----------ccCCChHHHHHHHHHHhcCCCcCC-------C-------------CCeE---EE--
Confidence 23322221 11 124699999999999887653210 0 0011 01
Q ss_pred CCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHH
Q 001087 516 NSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQ 595 (1159)
Q Consensus 516 ~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~ 595 (1159)
..+.++..+ +|+ -+..|+++.+.+. +.. +.++..+|.+++.++
T Consensus 349 --~g~Gi~~~~---~g~--~~~iG~~~~~~~~----~~~--------~~~~~~~g~~~~~~~------------------ 391 (562)
T TIGR01511 349 --PGIGVEGTV---EGT--KIQLGNEKLLGEN----AIK--------IDGKAEQGSTSVLVA------------------ 391 (562)
T ss_pred --CCceEEEEE---CCE--EEEEECHHHHHhC----CCC--------CChhhhCCCEEEEEE------------------
Confidence 122333332 232 2345888876431 111 112457899988887
Q ss_pred HHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceE
Q 001087 596 AKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQ 675 (1159)
Q Consensus 596 a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~ 675 (1159)
.|.+++|.++++|++++|++++|+.|++.|++++|+|||+..+|..+++++|+-
T Consensus 392 --------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------ 445 (562)
T TIGR01511 392 --------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------ 445 (562)
T ss_pred --------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------
Confidence 477899999999999999999999999999999999999999999999999981
Q ss_pred EEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhc
Q 001087 676 FIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLN 755 (1159)
Q Consensus 676 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~ 755 (1159)
T Consensus 446 -------------------------------------------------------------------------------- 445 (562)
T TIGR01511 446 -------------------------------------------------------------------------------- 445 (562)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hh
Q 001087 756 CSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LL 833 (1159)
Q Consensus 756 ~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll 833 (1159)
+++++.|++|.++++.+ +..++.|+|||||.||++|+++|||||++ .|.+. +..+||+++.+.+.-... ++
T Consensus 446 ----~~~~~~p~~K~~~v~~l-~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~--a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 446 ----VRAEVLPDDKAALIKEL-QEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDV--AIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred ----EEccCChHHHHHHHHHH-HHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHH--HHhhCCEEEeCCCHHHHHHHH
Confidence 55677899999999999 56788999999999999999999999988 45555 788999999876665544 69
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 834 VHGRWSYLRICKVVLYFFYKNLTFTLTQF 862 (1159)
Q Consensus 834 ~~Gr~~~~ri~~~i~~~~~kni~~~~~~~ 862 (1159)
..||..++++++++.|.+.+|++.+...+
T Consensus 519 ~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 519 DLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998765544
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-57 Score=549.03 Aligned_cols=464 Identities=19% Similarity=0.225 Sum_probs=367.9
Q ss_pred HHHHHHHHhhhhH------hhccceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCC
Q 001087 54 EAWEDWKRFQNDM------TINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLD 127 (1159)
Q Consensus 54 ~~~ed~~r~~~d~------~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~Lt 127 (1159)
..++.+.++|+.+ .+++.+++|+|+|+++++++++|+|||+|.|++||.+|||++++++ .+.||||+||
T Consensus 32 ~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g-----~~~vdes~lT 106 (536)
T TIGR01512 32 ETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSG-----TSTVDESALT 106 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEeC-----cEEEEecccC
Confidence 4455555554433 3467899999999999999999999999999999999999999985 4569999999
Q ss_pred CCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEe
Q 001087 128 GETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFA 207 (1159)
Q Consensus 128 GEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~t 207 (1159)
|||.|+.|.+++ ..|+||.+.+|. ++++|+.|
T Consensus 107 GEs~pv~k~~g~---------------------------~v~aGt~v~~G~---------------------~~~~V~~~ 138 (536)
T TIGR01512 107 GESVPVEKAPGD---------------------------EVFAGAINLDGV---------------------LTIVVTKL 138 (536)
T ss_pred CCCCcEEeCCCC---------------------------EEEeeeEECCce---------------------EEEEEEEe
Confidence 999999998865 359999999888 99999999
Q ss_pred ccchhhhh---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhh
Q 001087 208 GHETKVMM---NSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRF 284 (1159)
Q Consensus 208 G~~Tk~~~---n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~ 284 (1159)
|.+|.+.+ .....+.+++++++.++++..++.++.++++++.++.+.+... |
T Consensus 139 g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------------------- 193 (536)
T TIGR01512 139 PADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR---W---------------------- 193 (536)
T ss_pred ccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---c----------------------
Confidence 99996643 3445566789999999999999999888888776655432211 0
Q ss_pred HHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCC
Q 001087 285 LVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTR 364 (1159)
Q Consensus 285 ~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~ 364 (1159)
...+.+++.+++..|||+|+++++++...+ ..++ .++++++|+++.+|.||+++++|||||||||+
T Consensus 194 ---~~~~~~~~svlv~~~P~aL~la~~~~~~~~-~~~~----------~k~gilik~~~~le~l~~v~~i~fDKTGTLT~ 259 (536)
T TIGR01512 194 ---PFWVYRALVLLVVASPCALVISAPAAYLSA-ISAA----------ARHGILIKGGAALEALAKIKTVAFDKTGTLTT 259 (536)
T ss_pred ---HHHHHHHHHHHhhcCccccccchHHHHHHH-HHHH----------HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcC
Confidence 116777889999999999999999999988 8777 78999999999999999999999999999999
Q ss_pred CceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcc
Q 001087 365 NLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAIC 444 (1159)
Q Consensus 365 n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalC 444 (1159)
|+|++.++.. .+++...+.+
T Consensus 260 ~~~~v~~~~~------------------------------------------------------------~~~l~~a~~~ 279 (536)
T TIGR01512 260 GRPKVVDVVP------------------------------------------------------------AEVLRLAAAA 279 (536)
T ss_pred CceEEEEeeH------------------------------------------------------------HHHHHHHHHH
Confidence 9999987631 0122222211
Q ss_pred cceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEE
Q 001087 445 HTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSV 524 (1159)
Q Consensus 445 h~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv 524 (1159)
+ ..+.||.+.|+++++++.+ .+ +. . ..+| .+.+..
T Consensus 280 -----e---------~~~~hp~~~Ai~~~~~~~~-~~-----~~------------------~---~~~~----g~gi~~ 314 (536)
T TIGR01512 280 -----E---------QASSHPLARAIVDYARKRE-NV-----ES------------------V---EEVP----GEGVRA 314 (536)
T ss_pred -----h---------ccCCCcHHHHHHHHHHhcC-CC-----cc------------------e---EEec----CCeEEE
Confidence 1 1246999999999998754 10 00 0 0111 122222
Q ss_pred EEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHH
Q 001087 525 VCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDRE 604 (1159)
Q Consensus 525 iv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~ 604 (1159)
.+ +|.. +..|+++.+.+. + ...+..+|.+++.++
T Consensus 315 ~~---~g~~--~~ig~~~~~~~~----~----------~~~~~~~~~~~~~v~--------------------------- 348 (536)
T TIGR01512 315 VV---DGGE--VRIGNPRSLEAA----V----------GARPESAGKTIVHVA--------------------------- 348 (536)
T ss_pred EE---CCeE--EEEcCHHHHhhc----C----------CcchhhCCCeEEEEE---------------------------
Confidence 22 3332 234887654321 1 014566788877765
Q ss_pred HHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCC-eEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCc
Q 001087 605 QKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGI-KIWVLTGDKMETAINIAYACNLINNEMKQFIITSETN 683 (1159)
Q Consensus 605 ~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGI-kvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~ 683 (1159)
+|..++|.+.++|++++|++++|+.|+++|+ +++|+|||+..+|..+++++|+..
T Consensus 349 -----------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~------------- 404 (536)
T TIGR01512 349 -----------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE------------- 404 (536)
T ss_pred -----------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-------------
Confidence 4778999999999999999999999999999 999999999999999999999821
Q ss_pred ccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEe
Q 001087 684 AIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR 763 (1159)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R 763 (1159)
++++
T Consensus 405 ----------------------------------------------------------------------------~f~~ 408 (536)
T TIGR01512 405 ----------------------------------------------------------------------------VHAE 408 (536)
T ss_pred ----------------------------------------------------------------------------hhhc
Confidence 6778
Q ss_pred cChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceeec--Cccchhhhhccceeeccccccchh-hhhhhhhHH
Q 001087 764 VSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS--GQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSY 840 (1159)
Q Consensus 764 ~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgis--g~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~ 840 (1159)
+.|++|..+++.+ +..++.|+|+|||.||++|+++|||||++. |++. +..+||+++.+.++.... ++..||..+
T Consensus 409 ~~p~~K~~~i~~l-~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~--~~~~ad~vl~~~~l~~l~~~i~~~r~~~ 485 (536)
T TIGR01512 409 LLPEDKLEIVKEL-REKYGPVAMVGDGINDAPALAAADVGIAMGASGSDV--AIETADVVLLNDDLSRLPQAIRLARRTR 485 (536)
T ss_pred cCcHHHHHHHHHH-HhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHH--HHHhCCEEEECCCHHHHHHHHHHHHHHH
Confidence 8899999999999 677899999999999999999999999884 4444 788999999776666555 699999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 001087 841 LRICKVVLYFFYKNLTFTLTQFW 863 (1159)
Q Consensus 841 ~ri~~~i~~~~~kni~~~~~~~~ 863 (1159)
+++++++.|.+.+|++.+...++
T Consensus 486 ~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 486 RIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887666553
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-56 Score=567.39 Aligned_cols=490 Identities=18% Similarity=0.203 Sum_probs=390.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHh------hccceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCe
Q 001087 45 LVLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 118 (1159)
Q Consensus 45 ~vl~vs~ik~~~ed~~r~~~d~~------~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~ 118 (1159)
+++++..+.+++|++.+.|+.+. +.+.+++|+|+|++++|+.++|+|||+|.|++||.||||++++++ .
T Consensus 291 ~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g-----~ 365 (834)
T PRK10671 291 MIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG-----E 365 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc-----e
Confidence 34444455688888888776543 346789999999999999999999999999999999999999984 4
Q ss_pred EEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCC
Q 001087 119 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 198 (1159)
Q Consensus 119 ~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 198 (1159)
++||||.|||||.|+.|++++. +|+||++.+|.
T Consensus 366 ~~vdeS~lTGEs~pv~k~~gd~---------------------------V~aGt~~~~G~-------------------- 398 (834)
T PRK10671 366 AWLDEAMLTGEPIPQQKGEGDS---------------------------VHAGTVVQDGS-------------------- 398 (834)
T ss_pred EEEeehhhcCCCCCEecCCCCE---------------------------EEecceeccee--------------------
Confidence 6799999999999999999874 49999999998
Q ss_pred cEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccC
Q 001087 199 YIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVED 275 (1159)
Q Consensus 199 ~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~ 275 (1159)
+.+.|+.+|.+|.+ .+...+++..++++++.++++..++.+++++++++.+++|.+....
T Consensus 399 -~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~---------------- 461 (834)
T PRK10671 399 -VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPA---------------- 461 (834)
T ss_pred -EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc----------------
Confidence 99999999999955 4444556667899999999999999999998888877665432110
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEE
Q 001087 276 DQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIF 355 (1159)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~ 355 (1159)
......+..++.+++..|||+|+++++++...+ ..++ +++++++|+.+.+|.||++|++|
T Consensus 462 ---------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~-~~~~----------a~~gilvk~~~~le~l~~v~~v~ 521 (834)
T PRK10671 462 ---------PQIVYTLVIATTVLIIACPCALGLATPMSIISG-VGRA----------AEFGVLVRDADALQRASTLDTLV 521 (834)
T ss_pred ---------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHH-HHHH----------HHCCeEEecHHHHHhhcCCCEEE
Confidence 012236777899999999999999999999998 7777 78999999999999999999999
Q ss_pred ecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHH
Q 001087 356 SDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACK 435 (1159)
Q Consensus 356 sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1159)
||||||||+|+|++.++...+.. + ..
T Consensus 522 fDKTGTLT~g~~~v~~~~~~~~~-----~-------------------------------------------------~~ 547 (834)
T PRK10671 522 FDKTGTLTEGKPQVVAVKTFNGV-----D-------------------------------------------------EA 547 (834)
T ss_pred EcCCCccccCceEEEEEEccCCC-----C-------------------------------------------------HH
Confidence 99999999999999876432100 0 01
Q ss_pred HHHH-HHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeec
Q 001087 436 EFFR-CLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLE 514 (1159)
Q Consensus 436 ~~~~-~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~ 514 (1159)
+++. +.+++. .+.||.+.|++++++..+.. ... +
T Consensus 548 ~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~----------------------~~~--------~ 582 (834)
T PRK10671 548 QALRLAAALEQ---------------GSSHPLARAILDKAGDMTLP----------------------QVN--------G 582 (834)
T ss_pred HHHHHHHHHhC---------------CCCCHHHHHHHHHHhhCCCC----------------------Ccc--------c
Confidence 2222 222221 24799999999988643210 001 1
Q ss_pred CCCCC-ceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHH
Q 001087 515 FNSTR-KRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKF 593 (1159)
Q Consensus 515 F~s~r-krmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~ 593 (1159)
|.... +.+... . +|+ .+.+|+++.+.+... ..+.+.+.+++++.+|.+++++|+
T Consensus 583 ~~~~~g~Gv~~~--~-~g~--~~~~G~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~v~va~--------------- 637 (834)
T PRK10671 583 FRTLRGLGVSGE--A-EGH--ALLLGNQALLNEQQV-----DTKALEAEITAQASQGATPVLLAV--------------- 637 (834)
T ss_pred ceEecceEEEEE--E-CCE--EEEEeCHHHHHHcCC-----ChHHHHHHHHHHHhCCCeEEEEEE---------------
Confidence 11111 122222 1 343 345699987754211 123456667788999999999985
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCc
Q 001087 594 IQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEM 673 (1159)
Q Consensus 594 ~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~ 673 (1159)
|..++|+++++|++|+|++++|+.|++.|++++|+|||+.++|..+++++|+..
T Consensus 638 -----------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~--- 691 (834)
T PRK10671 638 -----------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE--- 691 (834)
T ss_pred -----------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE---
Confidence 457999999999999999999999999999999999999999999999999831
Q ss_pred eEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHh
Q 001087 674 KQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLS 753 (1159)
Q Consensus 674 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~ 753 (1159)
T Consensus 692 -------------------------------------------------------------------------------- 691 (834)
T PRK10671 692 -------------------------------------------------------------------------------- 691 (834)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-
Q 001087 754 LNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL- 831 (1159)
Q Consensus 754 ~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l- 831 (1159)
+++++.|++|.++++.+ +..++.|+|+|||.||++|+++|||||++ .|++. |+++||+++.+.++....
T Consensus 692 ------~~~~~~p~~K~~~i~~l-~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~--a~~~ad~vl~~~~~~~i~~ 762 (834)
T PRK10671 692 ------VIAGVLPDGKAEAIKRL-QSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDV--AIETAAITLMRHSLMGVAD 762 (834)
T ss_pred ------EEeCCCHHHHHHHHHHH-hhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHH--HHHhCCEEEecCCHHHHHH
Confidence 77889999999999999 56788999999999999999999999988 55565 889999999998887766
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 832 LLVHGRWSYLRICKVVLYFFYKNLTFTLTQF 862 (1159)
Q Consensus 832 ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~ 862 (1159)
++..||..++++++++.|.|.+|++.+...+
T Consensus 763 ~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 763 ALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999988765543
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-49 Score=436.53 Aligned_cols=516 Identities=17% Similarity=0.218 Sum_probs=379.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhHhhc----cceEEEeeC-CeEEEeeccCcccceEEEEccCCccCceEEEEeecCC
Q 001087 41 VPLSLVLLVSLIKEAWEDWKRFQNDMTIN----STPVEVLQG-QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNA 115 (1159)
Q Consensus 41 ~pl~~vl~vs~ik~~~ed~~r~~~d~~~n----~~~~~V~r~-g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~ 115 (1159)
+.|+|.+++..+-|++.+-|-+.+-..+. ...++++++ |+++.++..+|+.||||.|+.||.||+|+-+++
T Consensus 70 ~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe---- 145 (681)
T COG2216 70 IILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE---- 145 (681)
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe----
Confidence 44555666666667777655443322221 234566665 899999999999999999999999999999997
Q ss_pred CCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceee
Q 001087 116 DGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLR 195 (1159)
Q Consensus 116 ~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~ 195 (1159)
|.++||||++||||.|+.|.++...+. +-- |+.+.
T Consensus 146 -G~asVdESAITGESaPViresGgD~ss------------------------VtG--------------------gT~v~ 180 (681)
T COG2216 146 -GVASVDESAITGESAPVIRESGGDFSS------------------------VTG--------------------GTRVL 180 (681)
T ss_pred -eeeecchhhccCCCcceeeccCCCccc------------------------ccC--------------------CcEEe
Confidence 666799999999999999998754311 011 33333
Q ss_pred cCCcEEEEEEEeccch---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCC
Q 001087 196 NTEYIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNS 272 (1159)
Q Consensus 196 nt~~i~gvVv~tG~~T---k~~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~ 272 (1159)
++|+...++..-.+| |+....+.+..++||-|--++.+..-+.++.++. +++...+..| ....
T Consensus 181 -SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~-~~Tl~p~a~y-------~~g~----- 246 (681)
T COG2216 181 -SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLA-VATLYPFAIY-------SGGG----- 246 (681)
T ss_pred -eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHH-HHhhhhHHHH-------cCCC-----
Confidence 688999999888888 5566667888889998888877665554332221 1111111111 1000
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCce
Q 001087 273 VEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVE 352 (1159)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~ 352 (1159)
-..+...+.|++.+||-...-.+...-..+ +-++ .+.++++++...+|..|.||
T Consensus 247 ---------------~~~i~~LiALlV~LIPTTIGgLLsAIGIAG-MdRv----------~~~NViA~SGRAVEaaGDvd 300 (681)
T COG2216 247 ---------------AASVTVLVALLVCLIPTTIGGLLSAIGIAG-MDRV----------TQFNVIATSGRAVEAAGDVD 300 (681)
T ss_pred ---------------CcCHHHHHHHHHHHhcccHHHHHHHhhhhh-hhHh----------hhhceeecCcchhhhcCCcc
Confidence 014556678899999988877776666666 5555 67899999999999999999
Q ss_pred EEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChh
Q 001087 353 YIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPD 432 (1159)
Q Consensus 353 ~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (1159)
++..|||||+|-|.=.-.++...+. .
T Consensus 301 tliLDKTGTIT~GnR~A~~f~p~~g------------------------------------------------------v 326 (681)
T COG2216 301 TLLLDKTGTITLGNRQASEFIPVPG------------------------------------------------------V 326 (681)
T ss_pred EEEecccCceeecchhhhheecCCC------------------------------------------------------C
Confidence 9999999999987543333221110 1
Q ss_pred hHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEe
Q 001087 433 ACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNV 512 (1159)
Q Consensus 433 ~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~ 512 (1159)
..+++..+..+++-. -+.|....+|+.|++.|+....+. .. .....
T Consensus 327 ~~~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~~~~~------------------~~--~~~~f 372 (681)
T COG2216 327 SEEELADAAQLASLA--------------DETPEGRSIVELAKKLGIELREDD------------------LQ--SHAEF 372 (681)
T ss_pred CHHHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCCCccc------------------cc--cccee
Confidence 123444444443222 145778889999999986542111 00 02345
Q ss_pred ecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHH
Q 001087 513 LEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEK 592 (1159)
Q Consensus 513 ~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~ 592 (1159)
.||+.+.|..++-. +++ .-+-|||.+.|.+.....+...++.++...++-++.|-..|+++.
T Consensus 373 vpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~-------------- 434 (681)
T COG2216 373 VPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVE-------------- 434 (681)
T ss_pred eecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEE--------------
Confidence 79988776666544 344 456799999999998876666888999999999999999999983
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccC
Q 001087 593 FIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNE 672 (1159)
Q Consensus 593 ~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~ 672 (1159)
|-.++|++.++|-+++|.+|-+++||+.|||.+|+||||+.||..||.+.|+.+
T Consensus 435 ------------------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd-- 488 (681)
T COG2216 435 ------------------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-- 488 (681)
T ss_pred ------------------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh--
Confidence 678999999999999999999999999999999999999999999999999831
Q ss_pred ceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHH
Q 001087 673 MKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNL 752 (1159)
Q Consensus 673 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l 752 (1159)
T Consensus 489 -------------------------------------------------------------------------------- 488 (681)
T COG2216 489 -------------------------------------------------------------------------------- 488 (681)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh
Q 001087 753 SLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL 831 (1159)
Q Consensus 753 ~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l 831 (1159)
..+.++|++|..+++.- |..|+.|+|+|||.||+|||.+||||++| +|+.. |++|++++=.|-+.-+.+
T Consensus 489 -------fiAeatPEdK~~~I~~e-Q~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqA--AkEAaNMVDLDS~PTKli 558 (681)
T COG2216 489 -------FIAEATPEDKLALIRQE-QAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSNPTKLI 558 (681)
T ss_pred -------hhhcCChHHHHHHHHHH-HhcCcEEEEcCCCCCcchhhhhcchhhhhccccHH--HHHhhcccccCCCcccee
Confidence 55788999999999999 78999999999999999999999999999 88877 999999998887776655
Q ss_pred -hhhhhhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHh
Q 001087 832 -LLVHGRWSYLRICKVVLYFFYKNLTFT---LTQFWFTFQ 867 (1159)
Q Consensus 832 -ll~~Gr~~~~ri~~~i~~~~~kni~~~---~~~~~~~~~ 867 (1159)
++.-|+...-.=-.+..|++..-++-+ ++.+++.++
T Consensus 559 evV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~ 598 (681)
T COG2216 559 EVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAY 598 (681)
T ss_pred hHhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhc
Confidence 566777765554555556655544433 344444444
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=279.97 Aligned_cols=222 Identities=26% Similarity=0.421 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHhhcc---ce-EEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCe
Q 001087 43 LSLVLLVSLIKEAWEDWKRFQNDMTINS---TP-VEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 118 (1159)
Q Consensus 43 l~~vl~vs~ik~~~ed~~r~~~d~~~n~---~~-~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~ 118 (1159)
++++++++.+.+.++++++++..+++++ .+ ++|+|+|++++++|+||+|||||+|++||.+|||+++|+ +|.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g~ 77 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SGS 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SSE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee----ccc
Confidence 5677778888899999999999887653 34 899999999999999999999999999999999999997 478
Q ss_pred EEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCC
Q 001087 119 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 198 (1159)
Q Consensus 119 ~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 198 (1159)
|+||||+||||+.|+.|.+. +++.+|++++||.++ +|
T Consensus 78 ~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~-~g 114 (230)
T PF00122_consen 78 AYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV-SG 114 (230)
T ss_dssp EEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-EE
T ss_pred cccccccccccccccccccc------------------------------------------cccccchhhcccccc-cc
Confidence 99999999999999999863 567889999999999 88
Q ss_pred cEEEEEEEeccchhhhhcc---CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccC
Q 001087 199 YIIGAVIFAGHETKVMMNS---MNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVED 275 (1159)
Q Consensus 199 ~i~gvVv~tG~~Tk~~~n~---~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~ 275 (1159)
|++|+|++||.+|++.++. ..++.+++++++.++++..++.++.+++++++.+++.++.....|
T Consensus 115 ~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 181 (230)
T PF00122_consen 115 WGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFNDSGISF------------- 181 (230)
T ss_dssp EEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGSTTCHC-------------
T ss_pred ccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceeccccccc-------------
Confidence 9999999999999764443 356667899999999999999988888888776554432111122
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCccccc
Q 001087 276 DQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEE 347 (1159)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~ 347 (1159)
...+..++.+++.++|++|+++++++..++ +.++ .++++++|+++.+|+
T Consensus 182 ------------~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~-~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 182 ------------FKSFLFAISLLIVLIPCALPLALPLSLAIA-ARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp ------------CHHHHHHHHHHHHHS-TTHHHHHHHHHHHH-HHHH----------HHTTEEESSTTHHHH
T ss_pred ------------ccccccccceeeeecccceeehHHHHHHHH-HHHH----------HHCCEEEeCcccccC
Confidence 127788899999999999999999999999 8888 789999999999884
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.3e-22 Score=212.47 Aligned_cols=97 Identities=32% Similarity=0.490 Sum_probs=90.4
Q ss_pred CcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHH
Q 001087 617 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE 696 (1159)
Q Consensus 617 dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 696 (1159)
++.++|.+.+.|++++|++++|+.|+++||+++|+|||+..+|.++|+.+||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 789999999999999999999999999999999999999999999999999931
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEec--ChhhH--HHH
Q 001087 697 IARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRV--SPLQK--AQV 772 (1159)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~--sP~qK--~~i 772 (1159)
..|++++ +|++| .++
T Consensus 169 -------------------------------------------------------------~~v~a~~~~kP~~k~~~~~ 187 (215)
T PF00702_consen 169 -------------------------------------------------------------SIVFARVIGKPEPKIFLRI 187 (215)
T ss_dssp -------------------------------------------------------------EEEEESHETTTHHHHHHHH
T ss_pred -------------------------------------------------------------ccccccccccccchhHHHH
Confidence 3499999 99999 999
Q ss_pred HHHHHhccCcEEEEecCCccCHHHHHhcc
Q 001087 773 TSLVKKGARKITLSIGDGANDVSMIQAAH 801 (1159)
Q Consensus 773 V~~lk~~~g~~vl~iGDG~NDv~mL~~Ad 801 (1159)
++.+ +..+..|+|||||.||++|+++||
T Consensus 188 i~~l-~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 188 IKEL-QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHH-TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred HHHH-hcCCCEEEEEccCHHHHHHHHhCc
Confidence 9999 555569999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.3e-14 Score=131.35 Aligned_cols=90 Identities=37% Similarity=0.523 Sum_probs=71.1
Q ss_pred hcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCce
Q 001087 442 AICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKR 521 (1159)
Q Consensus 442 alCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkr 521 (1159)
++||++....+++.+... ..|+|+|.||+.+|.++|..+.. ...+..|++++.+||||+|||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~-----------------~~~~~~~~~~~~~pF~S~rK~ 62 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI-----------------KEIRSKYKIVAEIPFDSERKR 62 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH-----------------HHHHhhcceeEEEccCcccce
Confidence 689999886655333322 46899999999999999764321 013578999999999999999
Q ss_pred EEEEEEcCCCcEEEEEecchhHHHHHhhc
Q 001087 522 QSVVCRYADGRLVLYCKGADSVIYERLAN 550 (1159)
Q Consensus 522 msviv~~~~g~~~l~~KGA~~~i~~~~~~ 550 (1159)
|+||++ .++.+++|+|||||.|+++|+.
T Consensus 63 msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 63 MSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred eEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 999999 3456888999999999999974
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.2e-13 Score=124.45 Aligned_cols=122 Identities=21% Similarity=0.345 Sum_probs=105.1
Q ss_pred cEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHH
Q 001087 618 LTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEI 697 (1159)
Q Consensus 618 l~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~ 697 (1159)
+...+.++---+|=++|+++|+.|++. ++|.+-|||..-+-...|.-.|+-.+
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 456788888899999999999999999 99999999999999999998886321
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHH
Q 001087 698 ARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVK 777 (1159)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk 777 (1159)
-+++-.-|+.|+.+++.|
T Consensus 72 -------------------------------------------------------------rv~a~a~~e~K~~ii~eL- 89 (152)
T COG4087 72 -------------------------------------------------------------RVFAGADPEMKAKIIREL- 89 (152)
T ss_pred -------------------------------------------------------------eeecccCHHHHHHHHHHh-
Confidence 188888999999999999
Q ss_pred hccCcEEEEecCCccCHHHHHhcccceeecCccchh--hhhccceeecccccc
Q 001087 778 KGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQ--AVMASDFAIAQFRFL 828 (1159)
Q Consensus 778 ~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~q--A~~asD~~i~~f~~l 828 (1159)
++.++.|.|+|||+||.+||++||+||..-+.|+.. +..+||+++-+-+-.
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ 142 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEI 142 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHH
Confidence 568899999999999999999999999776666643 457999998775443
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.2e-10 Score=117.65 Aligned_cols=170 Identities=15% Similarity=0.136 Sum_probs=122.2
Q ss_pred chhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hccCC
Q 001087 875 FYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSAT 953 (1159)
Q Consensus 875 ~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~~~ 953 (1159)
++++.|++|.|++.+.+|++++|.+++ ++++|.|+|+ .++.++++++.+...+..|++++++.++.++ .....
T Consensus 3 Pl~~~qiL~inli~d~~~a~al~~e~~--~~~im~r~Pr----~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~ 76 (182)
T PF00689_consen 3 PLTPIQILWINLITDLLPALALGFEPP--DPDIMKRPPR----DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIF 76 (182)
T ss_dssp SS-HHHHHHHHHTTTHHHHHHGGGSS---STTGGGS-------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHST
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhcCcc--hhhhhhcccc----ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 478899999999999999999998665 7899999998 7888999999988889999999998887776 32211
Q ss_pred ccCCCCcccccccchhHHHHHHHHHHHHHHHHhhcc-----c---hhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCce
Q 001087 954 GQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNT-----I---TRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENV 1025 (1159)
Q Consensus 954 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~-----~---~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~ 1025 (1159)
+....+...+.....|++|+++++...+.. +.+++ | ....+..++.++++.++++++..++|.
T Consensus 77 ~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~-~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~-------- 147 (182)
T PF00689_consen 77 GWDEETNNDNLAQAQTMAFTALVLSQLFNA-FNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPG-------- 147 (182)
T ss_dssp CSSSHHHTTCHHHHHHHHHHHHHHHHHHHH-HHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTT--------
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhh-cccccccccceecccccccchHHHHHHHHHHHHHHHhcchh--------
Confidence 221111111244678999999999888874 44444 2 234567788888888887777777642
Q ss_pred eeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 1026 FFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGV 1059 (1159)
Q Consensus 1026 ~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~ 1059 (1159)
.+.++++. .++..|+.++..+++.++.++++|++
T Consensus 148 ~~~~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 148 LNRIFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHHST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred hHhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 34556666 78999999999999999999999874
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.1e-06 Score=99.27 Aligned_cols=287 Identities=15% Similarity=0.179 Sum_probs=170.0
Q ss_pred hhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCccc-chhcccC
Q 001087 614 IEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAI-RDVEERG 692 (1159)
Q Consensus 614 iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~-~~~~~~~ 692 (1159)
.-.+-.|.|++...-+.+.+....|+.|-+|.|+.+..+-.+.....-.|.+.||-......+.+..+...- .+... .
T Consensus 811 a~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~p-a 889 (1354)
T KOG4383|consen 811 AFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGP-A 889 (1354)
T ss_pred HhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCC-C
Confidence 346778999999999999999999999999999999999999999999999999988877767666543210 00000 0
Q ss_pred ChHHHH-HHHHHHHHHHHHHHHHHhhhh-ccccCCCceEE-EEcccchhHhcch----------hHHHHHHHHhhcC--C
Q 001087 693 DPVEIA-RFMREEVKRELNKCIDEAQQY-IHSISGEKLAL-IIDGKCLMYALDP----------SLRVILLNLSLNC--S 757 (1159)
Q Consensus 693 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l-vi~G~~l~~~l~~----------~~~~~~~~l~~~~--~ 757 (1159)
.++... +..+.....++.........- .+........+ -.|...-+.+-++ ..+.++.++- +. -
T Consensus 890 ~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iD-NVPLL 968 (1354)
T KOG4383|consen 890 HEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEID-NVPLL 968 (1354)
T ss_pred ChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCccccccc-Cccee
Confidence 000000 000001111100000000000 00000000000 0011100111110 0111111110 00 0
Q ss_pred ceEEEecChhhHHHHHHHHHhccCcEEEEecCCccC--HHHHHhcccceeecCccch----------------hh-----
Q 001087 758 SVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGAND--VSMIQAAHIGVGISGQEGM----------------QA----- 814 (1159)
Q Consensus 758 ~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND--v~mL~~AdVGIgisg~e~~----------------qA----- 814 (1159)
.-.|-.++|+.--++++.+ |+.|.+|+.+|..+|- .-..-+|||+|++-..|.. ||
T Consensus 969 V~LFTDcnpeamcEMIeIM-QE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandgls 1047 (1354)
T KOG4383|consen 969 VGLFTDCNPEAMCEMIEIM-QENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLS 1047 (1354)
T ss_pred eeeccCCCHHHHHHHHHHH-HHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCC
Confidence 1268899999999999999 8999999999999994 3455689999976443211 11
Q ss_pred ---------hhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHH
Q 001087 815 ---------VMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLY 884 (1159)
Q Consensus 815 ---------~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~~~~~~l~~~ 884 (1159)
+.+.|+-+.+-..++.. |++..|....-+++.++|.++....+..++|...++. -.++|+.-.++|.
T Consensus 1048 plQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~---LP~i~s~sdii~l 1124 (1354)
T KOG4383|consen 1048 PLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFF---LPIIFSHSDIILL 1124 (1354)
T ss_pred ceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---ccchhccchHHHH
Confidence 12233333333334444 6889999999999999999999999999998877763 3345776677776
Q ss_pred HhhhhhhHHHhhh-ccccCCChhhh
Q 001087 885 NVIFTSMPVIMLG-LFEKDVSASLS 908 (1159)
Q Consensus 885 n~i~t~lp~~~l~-~~d~~~~~~~~ 908 (1159)
..+- +|.+.+| +|.+......+
T Consensus 1125 Scfc--~PlL~i~tL~gk~~hkSii 1147 (1354)
T KOG4383|consen 1125 SCFC--IPLLFIGTLFGKFEHKSII 1147 (1354)
T ss_pred HHHH--HHHHHHHHHhcCCCccceE
Confidence 6543 6888777 55554444433
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.6e-07 Score=98.87 Aligned_cols=113 Identities=21% Similarity=0.240 Sum_probs=87.1
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
.++.+|+.+.++.++++|.+||++||=-..-+..||+.+|+...-.+.+...+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d--------------------------- 128 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD--------------------------- 128 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC---------------------------
Confidence 78999999999999999999999999999999999999999643322222211
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCc---EE
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARK---IT 784 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~---~v 784 (1159)
. +++|. ++.-.+..+.|...++.+.+..|. -+
T Consensus 129 ---------------------G-~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~ 163 (212)
T COG0560 129 ---------------------G-KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEET 163 (212)
T ss_pred ---------------------C-EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHe
Confidence 0 22332 233334457888888666555554 59
Q ss_pred EEecCCccCHHHHHhcccceeecCccch
Q 001087 785 LSIGDGANDVSMIQAAHIGVGISGQEGM 812 (1159)
Q Consensus 785 l~iGDG~NDv~mL~~AdVGIgisg~e~~ 812 (1159)
.|+|||+||.|||+.|+.+|++......
T Consensus 164 ~a~gDs~nDlpml~~ag~~ia~n~~~~l 191 (212)
T COG0560 164 VAYGDSANDLPMLEAAGLPIAVNPKPKL 191 (212)
T ss_pred EEEcCchhhHHHHHhCCCCeEeCcCHHH
Confidence 9999999999999999999999887663
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.6e-07 Score=99.95 Aligned_cols=117 Identities=18% Similarity=0.150 Sum_probs=85.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.||+.+.|+.|++.| ++.++||-....+..++..+|+..--.+.+.+....
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57999999999999975 999999999999999999999842110001110000
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEec
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 788 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iG 788 (1159)
.++|. .. ..|..|..+++.+ +..|..+.|+|
T Consensus 121 ----------------------~~tG~------------------------~~--~~~~~K~~~l~~l-~~~~~~~v~vG 151 (203)
T TIGR02137 121 ----------------------RVVGY------------------------QL--RQKDPKRQSVIAF-KSLYYRVIAAG 151 (203)
T ss_pred ----------------------eeECe------------------------ee--cCcchHHHHHHHH-HhhCCCEEEEe
Confidence 11221 11 3477899999999 56677899999
Q ss_pred CCccCHHHHHhcccceeecCccchhhhhccceee
Q 001087 789 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAI 822 (1159)
Q Consensus 789 DG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i 822 (1159)
||.||.+|++.|++||++.+++..+ ..+=|+..
T Consensus 152 Ds~nDl~ml~~Ag~~ia~~ak~~~~-~~~~~~~~ 184 (203)
T TIGR02137 152 DSYNDTTMLSEAHAGILFHAPENVI-REFPQFPA 184 (203)
T ss_pred CCHHHHHHHHhCCCCEEecCCHHHH-HhCCCCCc
Confidence 9999999999999999999988752 33444443
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.9e-07 Score=104.68 Aligned_cols=128 Identities=23% Similarity=0.258 Sum_probs=90.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.||+.++|+.|+++|+++.++||.....+..+..++|+..--.+.+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 48899999999999999999999999988888888888884211111111000
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC---cEEE
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR---KITL 785 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g---~~vl 785 (1159)
.++|.... .+ +..+.|+..++.+.++.| ..|.
T Consensus 234 ----------------------~ltg~v~g--------------------~i---v~~k~K~~~L~~la~~lgi~~~qtI 268 (322)
T PRK11133 234 ----------------------KLTGNVLG--------------------DI---VDAQYKADTLTRLAQEYEIPLAQTV 268 (322)
T ss_pred ----------------------EEEeEecC--------------------cc---CCcccHHHHHHHHHHHcCCChhhEE
Confidence 01111000 01 234678888888765555 6799
Q ss_pred EecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccchh
Q 001087 786 SIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL 831 (1159)
Q Consensus 786 ~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~l 831 (1159)
|||||+||.+|+++|++||++...+. .+..||.++.. ..+.-+
T Consensus 269 aVGDg~NDl~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~~-~~l~~~ 311 (322)
T PRK11133 269 AIGDGANDLPMIKAAGLGIAYHAKPK--VNEQAQVTIRH-ADLMGV 311 (322)
T ss_pred EEECCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEecC-cCHHHH
Confidence 99999999999999999999977766 56799999974 344433
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.6e-07 Score=97.05 Aligned_cols=128 Identities=24% Similarity=0.301 Sum_probs=90.3
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.+|++++++.|++.|+++.++||.....+..+....|+..--...+..+ +.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~--~~------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVE--DG------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEE--CC-------------------------
Confidence 589999999999999999999999999999999999998843100000000 00
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEe-cChhhHHHHHHHHHhccC---cEE
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR-VSPLQKAQVTSLVKKGAR---KIT 784 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R-~sP~qK~~iV~~lk~~~g---~~v 784 (1159)
+++|. +.++ +.+..|..+++.+.++.| ..+
T Consensus 138 ----------------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 171 (219)
T TIGR00338 138 ----------------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENT 171 (219)
T ss_pred ----------------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHE
Confidence 00110 1111 123346666665534433 458
Q ss_pred EEecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccchh
Q 001087 785 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL 831 (1159)
Q Consensus 785 l~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~l 831 (1159)
++|||+.||+.|.+.|+++|++.+.+. ..++||++|.+.++...+
T Consensus 172 i~iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~~~~~~ 216 (219)
T TIGR00338 172 VAVGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKDLTDIL 216 (219)
T ss_pred EEEECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCCHHHHH
Confidence 899999999999999999999988776 668999999987765433
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=6.3e-06 Score=92.47 Aligned_cols=61 Identities=20% Similarity=0.314 Sum_probs=48.8
Q ss_pred EecCh--hhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeecc
Q 001087 762 CRVSP--LQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 762 ~R~sP--~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~ 824 (1159)
..++| -.|+.-++.+.+..| .-|+++|||.||.+||+.|++||+|. +.+. ++.+||++..+
T Consensus 188 ~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~--vK~~A~~vt~~ 254 (270)
T PRK10513 188 LEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPS--VKEVAQFVTKS 254 (270)
T ss_pred EEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHH--HHHhcCeeccC
Confidence 34555 389888888766655 56999999999999999999999994 4444 78899998764
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.1e-05 Score=85.29 Aligned_cols=93 Identities=20% Similarity=0.250 Sum_probs=69.4
Q ss_pred CChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHH
Q 001087 632 EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNK 711 (1159)
Q Consensus 632 ~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (1159)
+++++.|+.++++|+++|++||+....+..+++.+|+.... ++.-....
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~----------------------------- 140 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFD----------------------------- 140 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEEC-----------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeee-----------------------------
Confidence 66669999999999999999999999999999999996432 11110000
Q ss_pred HHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChh-h--HHHHHHHH-----HhccCcE
Q 001087 712 CIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPL-Q--KAQVTSLV-----KKGARKI 783 (1159)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~-q--K~~iV~~l-----k~~~g~~ 783 (1159)
++ ......|++|. + |+..++.+ ++.....
T Consensus 141 ---------------------~~----------------------~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~ 177 (192)
T PF12710_consen 141 ---------------------NG----------------------GGIFTGRITGSNCGGKAEALKELYIRDEEDIDPDR 177 (192)
T ss_dssp ---------------------TT----------------------CCEEEEEEEEEEESHHHHHHHHHHHHHHHTHTCCE
T ss_pred ---------------------cc----------------------cceeeeeECCCCCCcHHHHHHHHHHHhhcCCCCCe
Confidence 00 12355666666 4 99999888 1234689
Q ss_pred EEEecCCccCHHHHH
Q 001087 784 TLSIGDGANDVSMIQ 798 (1159)
Q Consensus 784 vl~iGDG~NDv~mL~ 798 (1159)
+.++|||.||.+|||
T Consensus 178 ~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 178 VIAIGDSINDLPMLR 192 (192)
T ss_dssp EEEEESSGGGHHHHH
T ss_pred EEEEECCHHHHHHhC
Confidence 999999999999997
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.7e-05 Score=87.09 Aligned_cols=194 Identities=17% Similarity=0.160 Sum_probs=101.7
Q ss_pred eeeccc-ccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHH
Q 001087 624 TAIEDK-LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMR 702 (1159)
Q Consensus 624 ~~ieD~-lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 702 (1159)
+.-.|. +.+.+.++|+.+++.|+++.+.||-....+..+..++++-. .++..++.- +....+.-....+....-
T Consensus 14 Ll~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~--i~~~~~~i~~~~l~~~~~ 88 (264)
T COG0561 14 LLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGAL--IYNGGELLFQKPLSREDV 88 (264)
T ss_pred ccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeE--EecCCcEEeeecCCHHHH
Confidence 333344 78889999999999999999999999999999999999854 233333221 111100000000111111
Q ss_pred HHHHHHHHHHHHHhhhhccc-----cCCC-----------ceEE---EEcccc-hhH-hc---chhHHHHHHHHhhcCC-
Q 001087 703 EEVKRELNKCIDEAQQYIHS-----ISGE-----------KLAL---IIDGKC-LMY-AL---DPSLRVILLNLSLNCS- 757 (1159)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~-----~~~~-----------~~~l---vi~G~~-l~~-~l---~~~~~~~~~~l~~~~~- 757 (1159)
..+................. .... .... -.+... ... .. .+.+.+....+...+.
T Consensus 89 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 168 (264)
T COG0561 89 EELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPD 168 (264)
T ss_pred HHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccc
Confidence 11111111100000000000 0000 0000 000000 000 00 0111222222222222
Q ss_pred -ceEEEecCh---------hhHHHHHHHHHhccCcE---EEEecCCccCHHHHHhcccceeecCc-cchhhhhccceeec
Q 001087 758 -SVVCCRVSP---------LQKAQVTSLVKKGARKI---TLSIGDGANDVSMIQAAHIGVGISGQ-EGMQAVMASDFAIA 823 (1159)
Q Consensus 758 -~vI~~R~sP---------~qK~~iV~~lk~~~g~~---vl~iGDG~NDv~mL~~AdVGIgisg~-e~~qA~~asD~~i~ 823 (1159)
...+++..| -.|+.-++.+.+..|-. |+++|||.||.+||+.|..||++... +. ++..||++..
T Consensus 169 ~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~--~k~~A~~vt~ 246 (264)
T COG0561 169 LGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEE--LKELADYVTT 246 (264)
T ss_pred cceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHH--HHhhCCcccC
Confidence 344444444 38999998887767754 99999999999999999999999554 44 8889996644
Q ss_pred c
Q 001087 824 Q 824 (1159)
Q Consensus 824 ~ 824 (1159)
.
T Consensus 247 ~ 247 (264)
T COG0561 247 S 247 (264)
T ss_pred C
Confidence 3
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.05 E-value=8.1e-06 Score=82.06 Aligned_cols=113 Identities=21% Similarity=0.337 Sum_probs=79.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCce--EEEEecCCcccchhcccCChHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK--QFIITSETNAIRDVEERGDPVEIARFMREEVK 706 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (1159)
.|-+|++|..+.|++.|.++.+++|-=..-+..||.++||...+.. .+..+.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~-------------------------- 141 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDK-------------------------- 141 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeecc--------------------------
Confidence 4679999999999999999999999999999999999999653321 111110
Q ss_pred HHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhcc-CcEEE
Q 001087 707 RELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA-RKITL 785 (1159)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~-g~~vl 785 (1159)
+|+-+..-. --.-+...-|+.+++.+++.. -+.++
T Consensus 142 --------------------------~Gk~~gfd~------------------~~ptsdsggKa~~i~~lrk~~~~~~~~ 177 (227)
T KOG1615|consen 142 --------------------------DGKYLGFDT------------------NEPTSDSGGKAEVIALLRKNYNYKTIV 177 (227)
T ss_pred --------------------------CCccccccc------------------CCccccCCccHHHHHHHHhCCChheeE
Confidence 111111000 000011347999999997543 47899
Q ss_pred EecCCccCHHHHHhcccceeecCccc
Q 001087 786 SIGDGANDVSMIQAAHIGVGISGQEG 811 (1159)
Q Consensus 786 ~iGDG~NDv~mL~~AdVGIgisg~e~ 811 (1159)
|||||+||.+|+..||.=||..|...
T Consensus 178 mvGDGatDlea~~pa~afi~~~g~~~ 203 (227)
T KOG1615|consen 178 MVGDGATDLEAMPPADAFIGFGGNVI 203 (227)
T ss_pred EecCCccccccCCchhhhhccCCceE
Confidence 99999999999999877776655443
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.3e-05 Score=83.96 Aligned_cols=121 Identities=17% Similarity=0.188 Sum_probs=82.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.||++++++.|+++ +++.++||-....+..+...+|+..--...+....+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 3579999999999999 9999999999999999999988842100111110000
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEec
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 788 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iG 788 (1159)
.+.|.. . ..|..|...++.+ +..+..++|||
T Consensus 121 ----------------------~i~~~~-----------------------~---~~p~~k~~~l~~~-~~~~~~~v~iG 151 (205)
T PRK13582 121 ----------------------MITGYD-----------------------L---RQPDGKRQAVKAL-KSLGYRVIAAG 151 (205)
T ss_pred ----------------------eEECcc-----------------------c---cccchHHHHHHHH-HHhCCeEEEEe
Confidence 001100 0 1367788888877 45678899999
Q ss_pred CCccCHHHHHhcccceeecCccchhhhhccce-eecccc
Q 001087 789 DGANDVSMIQAAHIGVGISGQEGMQAVMASDF-AIAQFR 826 (1159)
Q Consensus 789 DG~NDv~mL~~AdVGIgisg~e~~qA~~asD~-~i~~f~ 826 (1159)
||.||..|.++|++||.....+... ...++. ++.+++
T Consensus 152 Ds~~D~~~~~aa~~~v~~~~~~~~~-~~~~~~~~~~~~~ 189 (205)
T PRK13582 152 DSYNDTTMLGEADAGILFRPPANVI-AEFPQFPAVHTYD 189 (205)
T ss_pred CCHHHHHHHHhCCCCEEECCCHHHH-HhCCcccccCCHH
Confidence 9999999999999999875554422 234454 555544
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.6e-05 Score=79.44 Aligned_cols=95 Identities=15% Similarity=0.185 Sum_probs=70.4
Q ss_pred HHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHh
Q 001087 637 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEA 716 (1159)
Q Consensus 637 tI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1159)
+|+.|++.|+++.++||+....+..+....|+-.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------------------------- 69 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------------------------- 69 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------------------------
Confidence 9999999999999999999999999999888731
Q ss_pred hhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhcc---CcEEEEecCCccC
Q 001087 717 QQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA---RKITLSIGDGAND 793 (1159)
Q Consensus 717 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~---g~~vl~iGDG~ND 793 (1159)
.+.. ...|...++.+.++. ...++|+||+.||
T Consensus 70 -------------------------------------------~~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D 104 (154)
T TIGR01670 70 -------------------------------------------LYQG--QSNKLIAFSDILEKLALAPENVAYIGDDLID 104 (154)
T ss_pred -------------------------------------------EEec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 0000 022344343332322 3579999999999
Q ss_pred HHHHHhcccceeecCccchhhhhccceeec
Q 001087 794 VSMIQAAHIGVGISGQEGMQAVMASDFAIA 823 (1159)
Q Consensus 794 v~mL~~AdVGIgisg~e~~qA~~asD~~i~ 823 (1159)
.+|++.|.+++++..... .....||+++.
T Consensus 105 ~~~~~~ag~~~~v~~~~~-~~~~~a~~i~~ 133 (154)
T TIGR01670 105 WPVMEKVGLSVAVADAHP-LLIPRADYVTR 133 (154)
T ss_pred HHHHHHCCCeEecCCcCH-HHHHhCCEEec
Confidence 999999999999954432 25677888885
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.7e-05 Score=85.13 Aligned_cols=181 Identities=18% Similarity=0.164 Sum_probs=95.8
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccc--hhcccCChHHHHHHHHHHHHH
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIR--DVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
+-+.+.++|+.|++.|+++.+.||-....+..+++.+++-. ..+..++.---.. ........ + +... .+..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~--~-~~~~-~~~~ 93 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFLGD--I-EECE-KAYS 93 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEEcc--h-HHHH-HHHH
Confidence 67889999999999999999999999999999999988732 2332222110000 00000000 0 0010 1111
Q ss_pred HHHHHHHHhhhhcccc-C-CCceEEE-EcccchhHhcchhHHHHHHHHhhc---CCceEEEecChhh--HHHHHHHHHhc
Q 001087 708 ELNKCIDEAQQYIHSI-S-GEKLALI-IDGKCLMYALDPSLRVILLNLSLN---CSSVVCCRVSPLQ--KAQVTSLVKKG 779 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~-~-~~~~~lv-i~G~~l~~~l~~~~~~~~~~l~~~---~~~vI~~R~sP~q--K~~iV~~lk~~ 779 (1159)
.+.+............ . .....+. .+.... ++..+.+.+.... ..+..+..+.|.. |+.-++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~ 168 (230)
T PRK01158 94 ELKKRFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAEL 168 (230)
T ss_pred HHHHhccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHH
Confidence 1111000000000000 0 0001111 122111 1222222221100 1111234666655 88888887655
Q ss_pred cC---cEEEEecCCccCHHHHHhcccceeecC-ccchhhhhccceeecc
Q 001087 780 AR---KITLSIGDGANDVSMIQAAHIGVGISG-QEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 780 ~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~asD~~i~~ 824 (1159)
.| .-++++|||.||.+|++.|++||++.+ .+. .+..||++..+
T Consensus 169 ~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~--vk~~a~~v~~~ 215 (230)
T PRK01158 169 MGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEE--LKEAADYVTEK 215 (230)
T ss_pred hCCCHHHEEEECCchhhHHHHHhcCceEEecCccHH--HHHhcceEecC
Confidence 44 569999999999999999999999944 443 67889998764
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.7e-05 Score=84.25 Aligned_cols=174 Identities=14% Similarity=0.165 Sum_probs=95.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCC-----cccchhcccCChHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSET-----NAIRDVEERGDPVEIARFMRE 703 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~-----~~~~~~~~~~~~~~~~~~~~~ 703 (1159)
++-+.+.++|++|+++|+++.+.||-....+..+++.+++-. ..+..++.- ..+ ......+ .........
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~-~~~~~~~-~~~~~~~~~ 92 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDI-FLANMEE-EWFLDEEKK 92 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcE-EEecccc-hhhHHHhhh
Confidence 478899999999999999999999999999999999888632 222222211 100 0000000 000000000
Q ss_pred HHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCce---EEEecC--hhhHHHHHHHHHh
Q 001087 704 EVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSV---VCCRVS--PLQKAQVTSLVKK 778 (1159)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v---I~~R~s--P~qK~~iV~~lk~ 778 (1159)
. ........ .........+..+++.... +...+.... ...+ .+-.++ .-.|+..++.+.+
T Consensus 93 ----~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~--~~~~~~~~~~ei~~~~~~K~~~i~~l~~ 157 (215)
T TIGR01487 93 ----K-RFPRDRLS---NEYPRASLVIMREGKDVDE-----VREIIKERG--LNLVDSGFAIHIMKKGVDKGVGVEKLKE 157 (215)
T ss_pred ----h-hhhhhhcc---cccceeEEEEecCCccHHH-----HHHHHHhCC--eEEEecCceEEEecCCCChHHHHHHHHH
Confidence 0 00000000 0000111222233332221 111111110 1111 122333 4589998888865
Q ss_pred ccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeecc
Q 001087 779 GAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 779 ~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~ 824 (1159)
..| ..++++||+.||.+|++.|++||++ .+.+. ++..||++...
T Consensus 158 ~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~--~k~~A~~v~~~ 205 (215)
T TIGR01487 158 LLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQ--LKEIADYVTSN 205 (215)
T ss_pred HhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHH--HHHhCCEEcCC
Confidence 554 3599999999999999999999999 44444 77889998753
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=97.90 E-value=5e-05 Score=82.67 Aligned_cols=184 Identities=15% Similarity=0.125 Sum_probs=94.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
.+.+.+.++|+.|+++||++.+.||-....+..+.+..|+.. ..+..++..-...+.....-...+.+.........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 367788899999999999999999999999999999988522 23322222100000000000000000000000000
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhc---CCceEEEecCh--hhHHHHHHHHHhccC--
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLN---CSSVVCCRVSP--LQKAQVTSLVKKGAR-- 781 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~---~~~vI~~R~sP--~qK~~iV~~lk~~~g-- 781 (1159)
........... .........+.... ..+ .......++... +.+..+..+.| ..|..-++.+.+..|
T Consensus 92 ~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~ 164 (225)
T TIGR01482 92 KTFPFSRLKVQ-YPRRASLVKMRYGI-DVD-----TVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIK 164 (225)
T ss_pred cccchhhhccc-cccccceEEEeecC-CHH-----HHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCC
Confidence 00000000000 00001111122211 111 111111111111 01122445555 478888877755544
Q ss_pred -cEEEEecCCccCHHHHHhcccceeecC-ccchhhhhccceeecc
Q 001087 782 -KITLSIGDGANDVSMIQAAHIGVGISG-QEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 782 -~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~asD~~i~~ 824 (1159)
..|+++||+.||.+|++.|++||+|.. .+. .+..||++...
T Consensus 165 ~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~--~k~~A~~vt~~ 207 (225)
T TIGR01482 165 PGETLVCGDSENDIDLFEVPGFGVAVANAQPE--LKEWADYVTES 207 (225)
T ss_pred HHHEEEECCCHhhHHHHHhcCceEEcCChhHH--HHHhcCeecCC
Confidence 569999999999999999999999954 443 67889998754
|
catalyze the same reaction as SPP. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=97.83 E-value=9.4e-05 Score=78.83 Aligned_cols=118 Identities=20% Similarity=0.261 Sum_probs=80.3
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.+|+.++++.|++.|+++.++||-....+..++...|+..--...+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999988632100111100000
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC---cEEE
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR---KITL 785 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g---~~vl 785 (1159)
...+ ..+-.+.|..|..+++.+.+..| ..++
T Consensus 134 ----------------------~~~p------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i 167 (201)
T TIGR01491 134 ----------------------FIQP------------------------DGIVRVTFDNKGEAVERLKRELNPSLTETV 167 (201)
T ss_pred ----------------------eEec------------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEE
Confidence 0000 01222446678777776644433 4699
Q ss_pred EecCCccCHHHHHhcccceeecCccchhhhhccc
Q 001087 786 SIGDGANDVSMIQAAHIGVGISGQEGMQAVMASD 819 (1159)
Q Consensus 786 ~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD 819 (1159)
+|||+.||++|+++|++++++.+.... ...|+|
T Consensus 168 ~iGDs~~D~~~a~~ag~~~a~~~~~~~-~~~a~~ 200 (201)
T TIGR01491 168 AVGDSKNDLPMFEVADISISLGDEGHA-DYLAKD 200 (201)
T ss_pred EEcCCHhHHHHHHhcCCeEEECCCccc-hhhccc
Confidence 999999999999999999998553322 445555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.83 E-value=4.5e-05 Score=82.38 Aligned_cols=112 Identities=12% Similarity=0.162 Sum_probs=73.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
-++++|+++.++.|++.|+++.++||.....+..+....+... . +.-+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~-i~~n---------------------------- 116 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---R-IYCN---------------------------- 116 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---c-EEec----------------------------
Confidence 4799999999999999999999999999988888887664321 1 1000
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceE-EEecChhhHHHHHHHHHhccCcEEEE
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVV-CCRVSPLQKAQVTSLVKKGARKITLS 786 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI-~~R~sP~qK~~iV~~lk~~~g~~vl~ 786 (1159)
-++++|..+..... + .... |..-....|..+++.++ .....++|
T Consensus 117 ---------------------~~~~~~~~~~~~~p-~------------~~~~~~~~~cg~~K~~~l~~~~-~~~~~~i~ 161 (214)
T TIGR03333 117 ---------------------EADFSNEYIHIDWP-H------------PCDGTCQNQCGCCKPSLIRKLS-EPNDYHIV 161 (214)
T ss_pred ---------------------eeEeeCCeeEEeCC-C------------CCccccccCCCCCHHHHHHHHh-hcCCcEEE
Confidence 01112221110000 0 0000 00111458999999884 45667899
Q ss_pred ecCCccCHHHHHhcccceee
Q 001087 787 IGDGANDVSMIQAAHIGVGI 806 (1159)
Q Consensus 787 iGDG~NDv~mL~~AdVGIgi 806 (1159)
||||.||..|.+.||++++-
T Consensus 162 iGDg~~D~~~a~~Ad~~~ar 181 (214)
T TIGR03333 162 IGDSVTDVEAAKQSDLCFAR 181 (214)
T ss_pred EeCCHHHHHHHHhCCeeEeh
Confidence 99999999999999997653
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=5.5e-05 Score=79.44 Aligned_cols=96 Identities=16% Similarity=0.177 Sum_probs=70.5
Q ss_pred HHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHH
Q 001087 636 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDE 715 (1159)
Q Consensus 636 etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (1159)
..|+.|++.|+++.++||.....+..++++.|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 68999999999999999999999999999988731
Q ss_pred hhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC---cEEEEecCCcc
Q 001087 716 AQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR---KITLSIGDGAN 792 (1159)
Q Consensus 716 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g---~~vl~iGDG~N 792 (1159)
++. ..+.|...++.+.+..| .-|+||||+.|
T Consensus 90 --------------------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~ 123 (183)
T PRK09484 90 --------------------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLI 123 (183)
T ss_pred --------------------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence 000 01223333333323333 56999999999
Q ss_pred CHHHHHhcccceeecCccchhhhhccceeec
Q 001087 793 DVSMIQAAHIGVGISGQEGMQAVMASDFAIA 823 (1159)
Q Consensus 793 Dv~mL~~AdVGIgisg~e~~qA~~asD~~i~ 823 (1159)
|.+|++.|.+++++...+. .+...||+++.
T Consensus 124 D~~~a~~aG~~~~v~~~~~-~~~~~a~~v~~ 153 (183)
T PRK09484 124 DWPVMEKVGLSVAVADAHP-LLLPRADYVTR 153 (183)
T ss_pred HHHHHHHCCCeEecCChhH-HHHHhCCEEec
Confidence 9999999999988743322 25667899885
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00011 Score=79.96 Aligned_cols=41 Identities=17% Similarity=0.404 Sum_probs=38.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|++++++.|++.|+++.++||.....+..+...+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999985
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0001 Score=82.58 Aligned_cols=61 Identities=25% Similarity=0.262 Sum_probs=47.4
Q ss_pred EEecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccc--eeec
Q 001087 761 CCRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASD--FAIA 823 (1159)
Q Consensus 761 ~~R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD--~~i~ 823 (1159)
+..+.|. .|+.-++.+.+..| .-|+++|||.||.+||+.|+.||+|. +.+. ++..|| ++..
T Consensus 181 ~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~--vK~~A~~~~v~~ 249 (266)
T PRK10976 181 CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQR--LKDLLPELEVIG 249 (266)
T ss_pred eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHH--HHHhCCCCeecc
Confidence 4456665 69998888866665 56999999999999999999999994 4444 677777 5554
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=6.6e-05 Score=84.33 Aligned_cols=58 Identities=17% Similarity=0.257 Sum_probs=47.0
Q ss_pred EEecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeecC-ccchhhhhccce
Q 001087 761 CCRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISG-QEGMQAVMASDF 820 (1159)
Q Consensus 761 ~~R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~asD~ 820 (1159)
+..++|. .|+.-++.+.+..| .-|+++|||-||.+||+.|+.||+|.. .+. ++.+||+
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~--vK~~A~~ 242 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQ--LRAELPH 242 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHH--HHHhCCC
Confidence 3456666 59998888866665 579999999999999999999999944 444 7788886
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=97.74 E-value=8.4e-05 Score=76.52 Aligned_cols=97 Identities=15% Similarity=0.163 Sum_probs=70.8
Q ss_pred HHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHH
Q 001087 636 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDE 715 (1159)
Q Consensus 636 etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (1159)
..|+.|+++|+++-++|+.....+..+...+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 48999999999999999999999999999999841
Q ss_pred hhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecC--hhhHHHHHHHHHhccCcEEEEecCCccC
Q 001087 716 AQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVS--PLQKAQVTSLVKKGARKITLSIGDGAND 793 (1159)
Q Consensus 716 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~s--P~qK~~iV~~lk~~~g~~vl~iGDG~ND 793 (1159)
.|.... |+--..+++.+ .-...-+++|||+.||
T Consensus 76 --------------------------------------------~f~~~kpkp~~~~~~~~~l-~~~~~ev~~iGD~~nD 110 (169)
T TIGR02726 76 --------------------------------------------FHEGIKKKTEPYAQMLEEM-NISDAEVCYVGDDLVD 110 (169)
T ss_pred --------------------------------------------EEecCCCCHHHHHHHHHHc-CcCHHHEEEECCCHHH
Confidence 111111 22112222222 1223569999999999
Q ss_pred HHHHHhcccceeecCccchhhhhccceeec
Q 001087 794 VSMIQAAHIGVGISGQEGMQAVMASDFAIA 823 (1159)
Q Consensus 794 v~mL~~AdVGIgisg~e~~qA~~asD~~i~ 823 (1159)
.+|++.|++++++..... +.+..||++..
T Consensus 111 i~~~~~ag~~~am~nA~~-~lk~~A~~I~~ 139 (169)
T TIGR02726 111 LSMMKRVGLAVAVGDAVA-DVKEAAAYVTT 139 (169)
T ss_pred HHHHHHCCCeEECcCchH-HHHHhCCEEcC
Confidence 999999999999965432 26788999875
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00012 Score=76.36 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=37.5
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
+++|+++.++.+++.|++++++||.....+..++...|+-
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999998874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0091 Score=71.88 Aligned_cols=41 Identities=22% Similarity=0.175 Sum_probs=38.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.+.++.++++|++++++|+=....+..++...|+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF 112 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF 112 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999999999983
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00011 Score=80.81 Aligned_cols=57 Identities=18% Similarity=0.263 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeecC-ccchhhhhccceeeccc
Q 001087 767 LQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISG-QEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 767 ~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~asD~~i~~f 825 (1159)
-.|+.-++.+.+..| ..++++||+-||.+|++.|+.||++.. .+. .+..||++...-
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~--~k~~a~~i~~~~ 245 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE--LKKAADYITPSN 245 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH--HHHHSSEEESSG
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH--HHHhCCEEecCC
Confidence 589998888866554 689999999999999999999999944 444 678999987653
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00015 Score=77.52 Aligned_cols=113 Identities=13% Similarity=0.060 Sum_probs=78.4
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHH
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEV 705 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1159)
+..++.+++.+.|+.+++.|++++++||-....+..+++.+|+..--...+....+.
T Consensus 84 ~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g----------------------- 140 (202)
T TIGR01490 84 IESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG----------------------- 140 (202)
T ss_pred HHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC-----------------------
Confidence 355789999999999999999999999999999999999999832000000000000
Q ss_pred HHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC---c
Q 001087 706 KRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR---K 782 (1159)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g---~ 782 (1159)
..+|+... -.+.++.|...++.+.+..+ .
T Consensus 141 -------------------------~~~g~~~~-----------------------~~~~g~~K~~~l~~~~~~~~~~~~ 172 (202)
T TIGR01490 141 -------------------------IYTGNIDG-----------------------NNCKGEGKVHALAELLAEEQIDLK 172 (202)
T ss_pred -------------------------EEeCCccC-----------------------CCCCChHHHHHHHHHHHHcCCCHH
Confidence 11221110 11246778877766544444 3
Q ss_pred EEEEecCCccCHHHHHhcccceeecCc
Q 001087 783 ITLSIGDGANDVSMIQAAHIGVGISGQ 809 (1159)
Q Consensus 783 ~vl~iGDG~NDv~mL~~AdVGIgisg~ 809 (1159)
.++++||+.+|.+|++.|+.++.+...
T Consensus 173 ~~~~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 173 DSYAYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred HcEeeeCCcccHHHHHhCCCcEEeCCC
Confidence 689999999999999999999988654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00018 Score=75.78 Aligned_cols=42 Identities=12% Similarity=0.081 Sum_probs=38.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++.+|+.++++.|++.|+++.++|+.....+..+....|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 478999999999999999999999999999999998888874
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00043 Score=77.04 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=36.1
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.-+.+.++|+.|+++|+++.+.||-....+..+.+++|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4446899999999999999999999999999999999874
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00046 Score=84.41 Aligned_cols=55 Identities=27% Similarity=0.436 Sum_probs=45.9
Q ss_pred hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeecc
Q 001087 768 QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 768 qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~ 824 (1159)
.|+.-++.+.+..| .-|+++|||.||.+||+.|+.||+| .+.+. .+.+||++...
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~ee--VK~~Ad~VT~s 565 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEK--TKAVADVIGVS 565 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHH--HHHhCCEEeCC
Confidence 78888888866665 5699999999999999999999999 45554 77889998754
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00073 Score=75.84 Aligned_cols=39 Identities=8% Similarity=0.106 Sum_probs=35.7
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
+-+.+.++|++|+++||++++.||-....+..+..++|+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~ 63 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGL 63 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCC
Confidence 345688999999999999999999999999999999997
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00043 Score=77.69 Aligned_cols=55 Identities=25% Similarity=0.420 Sum_probs=43.7
Q ss_pred hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeecc
Q 001087 768 QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 768 qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~ 824 (1159)
.|+.-++.+.+..| .-|+++||+.||.+|++.|++||++. +.+. .+..||++..+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~--lk~~Ad~v~~~ 257 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDA--VKARADLVIGD 257 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHH--HHHhCCEEEec
Confidence 68887776655555 56999999999999999999999984 3333 56789998864
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00042 Score=75.10 Aligned_cols=38 Identities=13% Similarity=0.240 Sum_probs=35.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 666 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~ 666 (1159)
+++||+.++++.|++.|+++.++||-....+..+....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence 68999999999999999999999999998888888877
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0011 Score=73.49 Aligned_cols=178 Identities=16% Similarity=0.142 Sum_probs=94.6
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHH-HHHHH
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARF-MREEV 705 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 705 (1159)
..+..+.+.++|+.+++.||++++.||-....+..+..+.++..++ . .+..+...+...... .....+.. ..+..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~--~-~I~~NGa~I~~~~~~-~~~~~~~~~~~~~~ 94 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD--I-WVTSVGSEIYYGGAE-VPDQHWAEYLSEKW 94 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC--E-EEEcCCceEEeCCCC-cCCHHHHHHHhccc
Confidence 4567788999999999999999999999999999999989986544 1 222222222211000 00011100 00000
Q ss_pred -HHHHHHHHHHhhhhc----cccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEE----ecCh--hhHHHHHH
Q 001087 706 -KRELNKCIDEAQQYI----HSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCC----RVSP--LQKAQVTS 774 (1159)
Q Consensus 706 -~~~~~~~~~~~~~~~----~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~----R~sP--~qK~~iV~ 774 (1159)
...+........... ...+..++.+..+.......+ .++.+.+......++.++++ .+.| ..|..-++
T Consensus 95 ~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~ 173 (249)
T TIGR01485 95 QRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVI-KQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQ 173 (249)
T ss_pred CHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHH-HHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHH
Confidence 001111111111000 011112333333322211111 22233333222223222322 4555 47888888
Q ss_pred HHHhccC---cEEEEecCCccCHHHHHh-cccceeecCc
Q 001087 775 LVKKGAR---KITLSIGDGANDVSMIQA-AHIGVGISGQ 809 (1159)
Q Consensus 775 ~lk~~~g---~~vl~iGDG~NDv~mL~~-AdVGIgisg~ 809 (1159)
.+.+..| ..|+++||+.||++|++. +..||++.+.
T Consensus 174 ~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 174 YLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred HHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 8866544 679999999999999998 6789999544
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0013 Score=72.45 Aligned_cols=42 Identities=10% Similarity=0.025 Sum_probs=37.3
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
+..-+.+.++|+.|+++||.+++.||-.......+..++++-
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 345566899999999999999999999999999999999973
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00053 Score=76.29 Aligned_cols=61 Identities=21% Similarity=0.383 Sum_probs=48.2
Q ss_pred EecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeecc
Q 001087 762 CRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 762 ~R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~ 824 (1159)
-.+.|. .|+.-++.+.+..| ..++++||+.||++|++.|+.|+++. +.+. .+..||++...
T Consensus 180 leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~--~k~~a~~~~~~ 246 (256)
T TIGR00099 180 IEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEE--LKALADYVTDS 246 (256)
T ss_pred EEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHH--HHHhCCEEecC
Confidence 345554 59998888866554 57999999999999999999999994 3343 67789998764
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00055 Score=67.28 Aligned_cols=117 Identities=18% Similarity=0.158 Sum_probs=77.8
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHH
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEV 705 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1159)
-..++.++++++++.|++.|++++++||.....+......+|+......++.......
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------------------- 78 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAI---------------------- 78 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhh----------------------
Confidence 3458999999999999999999999999999999999999987422111111100000
Q ss_pred HHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEE
Q 001087 706 KRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITL 785 (1159)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl 785 (1159)
.... ..... ....+++++-.|..+..+.+.+ ......++
T Consensus 79 ---------------~~~~----~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 117 (139)
T cd01427 79 ---------------YYPK----EGLFL---------------------GGGPFDIGKPNPDKLLAALKLL-GVDPEEVL 117 (139)
T ss_pred ---------------hccc----ccccc---------------------cccccccCCCCHHHHHHHHHHc-CCChhhEE
Confidence 0000 00000 1123466667777777777776 44467899
Q ss_pred EecCCccCHHHHHh-ccccee
Q 001087 786 SIGDGANDVSMIQA-AHIGVG 805 (1159)
Q Consensus 786 ~iGDG~NDv~mL~~-AdVGIg 805 (1159)
++||+.||+.|.+. +.-+|+
T Consensus 118 ~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 118 MVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred EeCCCHHHHHHHHHcCCceee
Confidence 99999999999998 444443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00094 Score=73.31 Aligned_cols=177 Identities=16% Similarity=0.156 Sum_probs=89.3
Q ss_pred HHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHH-H-HHHHHHHHH
Q 001087 635 PACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMR-E-EVKRELNKC 712 (1159)
Q Consensus 635 ~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 712 (1159)
.++++ ++++||++.+.||-....+..+...+++...+ .++..++. .+..... ......+.... + ....++...
T Consensus 21 ~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~-~~I~~nGa--~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 95 (236)
T TIGR02471 21 VELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPD-VLIARVGT--EIYYGPE-LQPDRFWQKHIDHDWRRQAVVEA 95 (236)
T ss_pred HHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCC-EEEECCCc--eEEeCCC-CCCChhHHHHHhcCCCHHHHHHH
Confidence 35666 68899999999999999999999999874322 12222221 1110000 00000010000 0 000111111
Q ss_pred HHHhhhh-ccccC---CCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEE----ecChh--hHHHHHHHHHhccC-
Q 001087 713 IDEAQQY-IHSIS---GEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCC----RVSPL--QKAQVTSLVKKGAR- 781 (1159)
Q Consensus 713 ~~~~~~~-~~~~~---~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~----R~sP~--qK~~iV~~lk~~~g- 781 (1159)
....... .+... ..+..+..+.+.... + .++.+.+......++.+.++ .+.|. .|...++.+.++.|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~ 173 (236)
T TIGR02471 96 LADIPGLTLQDDQEQGPFKISYLLDPEGEPI-L-PQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGL 173 (236)
T ss_pred HhcCCCcEeCChhcCCCeeEEEEECcccchH-H-HHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCC
Confidence 1111100 00111 122233333321110 0 12222332222112222222 35564 89999988866555
Q ss_pred --cEEEEecCCccCHHHHHhcccceeecCccchhhhhccc
Q 001087 782 --KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASD 819 (1159)
Q Consensus 782 --~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD 819 (1159)
.-++++||+.||.+|++.|+.||++.+.+.. .+..||
T Consensus 174 ~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~ 212 (236)
T TIGR02471 174 PLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRH 212 (236)
T ss_pred CHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhc
Confidence 3589999999999999999999999554332 566788
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.001 Score=72.32 Aligned_cols=43 Identities=9% Similarity=0.010 Sum_probs=38.1
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.++.-+++.++|+.|+++|+++.+.||-....+..+..++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455667999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0022 Score=69.56 Aligned_cols=36 Identities=19% Similarity=0.227 Sum_probs=34.1
Q ss_pred hHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 634 VPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 634 v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
+.++|+.|+++||++.+.||-....+..+...+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 789999999999999999999999999999999974
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0031 Score=70.92 Aligned_cols=42 Identities=14% Similarity=0.088 Sum_probs=38.0
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
+.+-+++.++|+.|++.|+++.+.||-....+..+..++|+.
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 345677999999999999999999999999999999999974
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0012 Score=71.76 Aligned_cols=42 Identities=21% Similarity=0.260 Sum_probs=38.6
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++.+|+.+.++.|++.|+++.++||.....+..+....|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468899999999999999999999999999998999888874
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0034 Score=68.06 Aligned_cols=44 Identities=25% Similarity=0.283 Sum_probs=40.9
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 670 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~ 670 (1159)
+.++-+|++++++.|+++|++.-++|++....+..+....|+..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~ 130 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD 130 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc
Confidence 66789999999999999999999999999999999999988853
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0044 Score=75.82 Aligned_cols=37 Identities=5% Similarity=0.003 Sum_probs=34.2
Q ss_pred CChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 632 EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 632 ~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
+.+.++|+.|+++||++.+.||-....+..+++++++
T Consensus 436 ~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 436 STALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4678999999999999999999999999999999986
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0069 Score=67.63 Aligned_cols=182 Identities=11% Similarity=0.186 Sum_probs=92.2
Q ss_pred cccCChHHHHHHHHH-cCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLAR-AGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~-aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
.+-+++.++|+.|++ .|++++++||-....+..+....++ .++..++.. +.+.........+.......+.+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~-----~~i~~nGa~--i~~~~~~~~~~~l~~~~~~~i~~ 108 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRF-----PLAGVHGAE--RRDINGKTHIVHLPDAIARDISV 108 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccc-----eEEEeCCCe--eecCCCCeeeccCChhHHHHHHH
Confidence 345788899999998 7999999999999998887765542 122222111 10000000000011111122222
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCce------EEEecCh--hhHHHHHHHHHhc
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSV------VCCRVSP--LQKAQVTSLVKKG 779 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v------I~~R~sP--~qK~~iV~~lk~~ 779 (1159)
.+.+....... ..-.....+++........ -++.+......+...+..+ -+-.+.| ..|+.-++.+.+.
T Consensus 109 ~l~~~~~~~pg--~~ve~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~ 185 (266)
T PRK10187 109 QLHTALAQLPG--AELEAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQE 185 (266)
T ss_pred HHHHHhccCCC--cEEEeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHh
Confidence 22221111100 0001122334433322210 0111222222333222211 2233444 4899988776555
Q ss_pred cC---cEEEEecCCccCHHHHHhc----ccceeecCccchhhhhccceeeccc
Q 001087 780 AR---KITLSIGDGANDVSMIQAA----HIGVGISGQEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 780 ~g---~~vl~iGDG~NDv~mL~~A----dVGIgisg~e~~qA~~asD~~i~~f 825 (1159)
.| ..++++||+.||.+|++.+ ..||.+.. |...|++.+.+-
T Consensus 186 ~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~-----a~~~A~~~l~~~ 233 (266)
T PRK10187 186 APFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGT-----GATQASWRLAGV 233 (266)
T ss_pred cCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECC-----CCCcCeEeCCCH
Confidence 54 6799999999999999999 77777732 335678877753
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0039 Score=66.72 Aligned_cols=38 Identities=21% Similarity=0.342 Sum_probs=34.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 666 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~ 666 (1159)
++-+.+.++|++|++.|+++.++||-....+..+....
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~ 54 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQL 54 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence 46688899999999999999999999999999988873
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0038 Score=67.14 Aligned_cols=41 Identities=20% Similarity=0.237 Sum_probs=37.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+-....+..+....|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 68899999999999999999999999988888888888874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.011 Score=70.25 Aligned_cols=169 Identities=18% Similarity=0.101 Sum_probs=88.8
Q ss_pred HHH-HHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHH-H-HHHHHHH
Q 001087 636 ACI-ETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREE-V-KRELNKC 712 (1159)
Q Consensus 636 etI-~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 712 (1159)
+++ +.+++.|+...+.||-....+..+.+..++..++.- +......+...+... ....+....+. . ...+.+.
T Consensus 35 ~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~---I~~nGt~I~~~~~~~-~d~~w~~~l~~~w~~~~v~~~ 110 (413)
T PLN02382 35 NALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDIT---IMSVGTEIAYGESMV-PDHGWVEYLNKKWDREIVVEE 110 (413)
T ss_pred HHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEE---EEcCCcEEEeCCCCc-cChhHHHHHhccCChhhHHHH
Confidence 344 888999999999999999999999999998877622 211221121110000 01111111100 0 0001111
Q ss_pred HHHhhhh----ccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCce----EEEecChh--hHHHHHHHHHhcc--
Q 001087 713 IDEAQQY----IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSV----VCCRVSPL--QKAQVTSLVKKGA-- 780 (1159)
Q Consensus 713 ~~~~~~~----~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v----I~~R~sP~--qK~~iV~~lk~~~-- 780 (1159)
....... .......+..+..+.+....+ .+++.+.+......++.+ -+..+.|. .|+.-++.+.+..
T Consensus 111 ~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~ 189 (413)
T PLN02382 111 TSKFPELKLQPETEQRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKA 189 (413)
T ss_pred HhcCCCcccCCcccCCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhh
Confidence 1111000 001112233444443332221 223333333211112111 23466775 4999888886654
Q ss_pred -C---cEEEEecCCccCHHHHHhcc-cceeecCc
Q 001087 781 -R---KITLSIGDGANDVSMIQAAH-IGVGISGQ 809 (1159)
Q Consensus 781 -g---~~vl~iGDG~NDv~mL~~Ad-VGIgisg~ 809 (1159)
| ..|+++||+.||.+||+.|+ .||+|.+.
T Consensus 190 ~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 190 EGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred cCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence 3 47899999999999999999 69999543
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0048 Score=69.22 Aligned_cols=42 Identities=12% Similarity=0.185 Sum_probs=36.3
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
..++.+|+.++++.|++.|+++.++||-..+.+..+....|+
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 347889999999999999999999999888877777766665
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0057 Score=65.46 Aligned_cols=41 Identities=24% Similarity=0.334 Sum_probs=37.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++||.....+..+-...|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 78899999999999999999999999888888888877774
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.02 Score=63.45 Aligned_cols=44 Identities=9% Similarity=0.245 Sum_probs=40.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccC
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNE 672 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~ 672 (1159)
++++|+++.++.|++.||++.++||=-...+..+.++.|+....
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 57999999999999999999999999999999999999986554
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0088 Score=65.32 Aligned_cols=41 Identities=22% Similarity=0.123 Sum_probs=36.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+.....+..+-...|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 57899999999999999999999999888877777777763
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.015 Score=65.19 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=38.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++-++|+.....+..+-...||.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 67899999999999999999999999999999998888874
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.023 Score=61.06 Aligned_cols=111 Identities=15% Similarity=0.135 Sum_probs=76.1
Q ss_pred cccCChHHHHH-HHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIE-TLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 629 ~lq~~v~etI~-~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
.+.|++.++|+ .+++.|++++++|+=....+..+|+..++...+ +++...-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57999999996 788899999999999999999999986664421 22211100
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEe
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 787 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~i 787 (1159)
+.+|.. +.--.|.-++|..-++..-.......-+=
T Consensus 147 -----------------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aY 181 (210)
T TIGR01545 147 -----------------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGY 181 (210)
T ss_pred -----------------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEe
Confidence 011100 01123456788775553312223455688
Q ss_pred cCCccCHHHHHhcccceeecCccc
Q 001087 788 GDGANDVSMIQAAHIGVGISGQEG 811 (1159)
Q Consensus 788 GDG~NDv~mL~~AdVGIgisg~e~ 811 (1159)
||..||.|||+.|+-.+.+++.+.
T Consensus 182 sDS~~D~pmL~~a~~~~~Vnp~~~ 205 (210)
T TIGR01545 182 SDSKQDNPLLAFCEHRWRVSKRGE 205 (210)
T ss_pred cCCcccHHHHHhCCCcEEECcchH
Confidence 999999999999999999977654
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.1 Score=67.04 Aligned_cols=181 Identities=16% Similarity=0.145 Sum_probs=89.7
Q ss_pred ccCChHHHHHHHHH-cCCeEEEEeCCcHhHHHHHHHHcC--ccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHH
Q 001087 630 LQEGVPACIETLAR-AGIKIWVLTGDKMETAINIAYACN--LINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVK 706 (1159)
Q Consensus 630 lq~~v~etI~~L~~-aGIkvwmLTGD~~eTAi~Ia~~~g--l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (1159)
+-+++.++++.|.+ .|+.|+++||-............+ ++.++...+...+. .. .........+ ++.+.
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~--~w---~~~~~~~~~w---~~~v~ 586 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGG--EW---QLLEPVATEW---KDAVR 586 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCC--ce---EECCCcchhH---HHHHH
Confidence 55778889999999 699999999999998877654333 22222221111100 00 0000001111 12222
Q ss_pred HHHHHHHHHhhhhccccCCCceEEEEc--c--cchhHhcchhHHHHHHHHhhcCCceEE-----EecCh--hhHHHHHHH
Q 001087 707 RELNKCIDEAQQYIHSISGEKLALIID--G--KCLMYALDPSLRVILLNLSLNCSSVVC-----CRVSP--LQKAQVTSL 775 (1159)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~lvi~--G--~~l~~~l~~~~~~~~~~l~~~~~~vI~-----~R~sP--~qK~~iV~~ 775 (1159)
.-++........ ........+++.. . ..+......++...+..+.......+. ..+.| -.|+..++.
T Consensus 587 ~il~~~~~~~~g--s~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ 664 (726)
T PRK14501 587 PILEEFVDRTPG--SFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRR 664 (726)
T ss_pred HHHHHHHhcCCC--cEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHH
Confidence 112111111110 0001122333332 1 111111112333344333222111111 23445 589999988
Q ss_pred HHhcc-CcEEEEecCCccCHHHHHhcc---cceeecCccchhhhhccceeeccc
Q 001087 776 VKKGA-RKITLSIGDGANDVSMIQAAH---IGVGISGQEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 776 lk~~~-g~~vl~iGDG~NDv~mL~~Ad---VGIgisg~e~~qA~~asD~~i~~f 825 (1159)
+.+.. -..++++||+.||.+|++.++ .||.+.. +..+|++.+.+-
T Consensus 665 ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~~~ 713 (726)
T PRK14501 665 LLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLPSQ 713 (726)
T ss_pred HHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCCCH
Confidence 85432 258999999999999999974 4444422 346788988764
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.017 Score=64.14 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=37.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+-....+..+-..+|+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 149 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGME 149 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCH
Confidence 57899999999999999999999999999998888888874
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.014 Score=63.25 Aligned_cols=42 Identities=17% Similarity=0.202 Sum_probs=37.9
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++-+|+.++++.|++.|+++.++||.....+..+.+..||.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 468899999999999999999999999988888888888864
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.021 Score=61.63 Aligned_cols=41 Identities=22% Similarity=0.113 Sum_probs=37.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|+++|+++.++||-....+..+-...|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 37899999999999999999999999998888888888874
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.065 Score=57.68 Aligned_cols=112 Identities=9% Similarity=0.087 Sum_probs=77.4
Q ss_pred cccCChHHHH-HHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACI-ETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 629 ~lq~~v~etI-~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
.+.+|+.++| +.|++.|++++++|+-....+..++...|+.. ...++...-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l--------------------------- 146 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQM--------------------------- 146 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEE---------------------------
Confidence 4589999999 57888999999999999999999999988632 112221110
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEe
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 787 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~i 787 (1159)
....+|+- ..-.|..+.|..-++..-.......-+=
T Consensus 147 ---------------------~~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY 182 (211)
T PRK11590 147 ---------------------QRRYGGWV-----------------------LTLRCLGHEKVAQLERKIGTPLRLYSGY 182 (211)
T ss_pred ---------------------EEEEccEE-----------------------CCccCCChHHHHHHHHHhCCCcceEEEe
Confidence 00112221 1223557888776654312233455688
Q ss_pred cCCccCHHHHHhcccceeecCccch
Q 001087 788 GDGANDVSMIQAAHIGVGISGQEGM 812 (1159)
Q Consensus 788 GDG~NDv~mL~~AdVGIgisg~e~~ 812 (1159)
||..||.|||+.|+-.+.+.....+
T Consensus 183 ~Ds~~D~pmL~~a~~~~~vnp~~~l 207 (211)
T PRK11590 183 SDSKQDNPLLYFCQHRWRVTPRGEL 207 (211)
T ss_pred cCCcccHHHHHhCCCCEEECccHHh
Confidence 9999999999999999999876653
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.1 Score=57.69 Aligned_cols=48 Identities=25% Similarity=0.335 Sum_probs=38.5
Q ss_pred ecCh--hhHHHHHHHHHhccCcEEEEecC----CccCHHHHHhc-ccceeecCccc
Q 001087 763 RVSP--LQKAQVTSLVKKGARKITLSIGD----GANDVSMIQAA-HIGVGISGQEG 811 (1159)
Q Consensus 763 R~sP--~qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~A-dVGIgisg~e~ 811 (1159)
.+.| -.|+.-++.+.+. ..-|+++|| |-||.+||+.| -.|+++.+.+-
T Consensus 181 eI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~ 235 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPED 235 (247)
T ss_pred EeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHH
Confidence 4444 4899988888554 678999999 99999999987 78888876654
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.021 Score=56.30 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=30.6
Q ss_pred HHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 636 ACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 636 etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
--|+.|.++||++-++||-+..-+..=|+++||
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI 74 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGI 74 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCC
Confidence 379999999999999999999999999999998
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.054 Score=58.58 Aligned_cols=40 Identities=23% Similarity=0.222 Sum_probs=33.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++.||+.++++.|+++|+++.++|+.....+..+-...|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999877666555455555
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.06 Score=58.21 Aligned_cols=42 Identities=21% Similarity=0.214 Sum_probs=38.6
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.++.+|+++.++.|++.|+++.++||-..+.+..+-...|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999998888888874
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.071 Score=55.43 Aligned_cols=163 Identities=20% Similarity=0.182 Sum_probs=91.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
+|-||+.+|++.|+.. ....+++---..-+..+|.-+|+-..+...-.++-++..+. +..++.+..
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~P------------eeeR~E~L~- 148 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVP------------EEEREELLS- 148 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCC------------hHHHHHHHH-
Confidence 5679999999998865 45666666677788899999988655433222222211111 111111111
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHH----HHHHHHhhcCCceEEEecChhhHHHHHHHHHhcc--Cc
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLR----VILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA--RK 782 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~----~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~--g~ 782 (1159)
.+. ..-.++|.+|-.-+|+-+. ...-+++...++|-. ..|+.+++.+-.-. ..
T Consensus 149 ------~~~----------~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGg-----g~ka~i~e~~~ele~~d~ 207 (315)
T COG4030 149 ------IID----------VIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGG-----GEKAKIMEGYCELEGIDF 207 (315)
T ss_pred ------hcC----------ccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccC-----cchhHHHHHHHhhcCCCc
Confidence 111 0113566655443332110 111122222222211 34556655553222 23
Q ss_pred EEEEecCCccCHHHHHhcc----cceeecCccchhhhhccceeecccccc
Q 001087 783 ITLSIGDGANDVSMIQAAH----IGVGISGQEGMQAVMASDFAIAQFRFL 828 (1159)
Q Consensus 783 ~vl~iGDG~NDv~mL~~Ad----VGIgisg~e~~qA~~asD~~i~~f~~l 828 (1159)
-.+.+||.+.|+.||+++. +.|+..|.|- |..-||+++..-...
T Consensus 208 sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvisp~~~ 255 (315)
T COG4030 208 SAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVISPTAM 255 (315)
T ss_pred ceeEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEeccchh
Confidence 4678999999999999984 5567799998 899999998765443
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.089 Score=58.07 Aligned_cols=166 Identities=20% Similarity=0.220 Sum_probs=86.8
Q ss_pred HHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHH-HHHH-HHHHHHHHHHHHhhh
Q 001087 641 LARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIAR-FMRE-EVKRELNKCIDEAQQ 718 (1159)
Q Consensus 641 L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 718 (1159)
..+.++...+.||-+.+.+..+..+.++..++ +.+.+...++-..+ .......|. .+.. .-.+.+.+....+..
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd---~~I~svGt~I~~~~-~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~ 106 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPD---YIITSVGTEIYYGE-NWQPDEEWQAHIDERWDRERVEEILAELPG 106 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-S---EEEETTTTEEEESS-TTEE-HHHHHHHHTT--HHHHHHHHHCHCC
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCC---EEEecCCeEEEEcC-CCcChHHHHHHHHhcCChHHHHHHHHHhhC
Confidence 34778999999999999999999999987653 23333322222211 111111111 1111 011222222222211
Q ss_pred h----ccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCce----EEEecCh--hhHHHHHHHHHhccC---cEEE
Q 001087 719 Y----IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSV----VCCRVSP--LQKAQVTSLVKKGAR---KITL 785 (1159)
Q Consensus 719 ~----~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v----I~~R~sP--~qK~~iV~~lk~~~g---~~vl 785 (1159)
- .......+.+..++.......+ ++++..+..-...|+.+ -+..+.| ..|..-|+.++++.+ ..|+
T Consensus 107 l~~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl 185 (247)
T PF05116_consen 107 LRPQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVL 185 (247)
T ss_dssp EEEGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEE
T ss_pred cccCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEE
Confidence 0 0111233555566655444322 33444443333333222 1234445 489999999976654 4688
Q ss_pred EecCCccCHHHHHhcccceeecCccc
Q 001087 786 SIGDGANDVSMIQAAHIGVGISGQEG 811 (1159)
Q Consensus 786 ~iGDG~NDv~mL~~AdVGIgisg~e~ 811 (1159)
++||+.||.+||..++-||-+.+.+.
T Consensus 186 ~aGDSgND~~mL~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 186 VAGDSGNDLEMLEGGDHGVVVGNAQP 211 (247)
T ss_dssp EEESSGGGHHHHCCSSEEEE-TTS-H
T ss_pred EEeCCCCcHHHHcCcCCEEEEcCCCH
Confidence 89999999999999999998866543
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.19 Score=55.40 Aligned_cols=66 Identities=14% Similarity=0.140 Sum_probs=46.0
Q ss_pred EEEecChhhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhc--------ccceeecCccchhhhhccceeecccccc
Q 001087 760 VCCRVSPLQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAA--------HIGVGISGQEGMQAVMASDFAIAQFRFL 828 (1159)
Q Consensus 760 I~~R~sP~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~A--------dVGIgisg~e~~qA~~asD~~i~~f~~l 828 (1159)
+-.+-.+..|...++.+.+..+ ..++++||+.||..|++.+ ..||.+. ++. ....|++.+.+..-+
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g~-~~~~A~~~~~~~~~v 235 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SGS-KKTVAKFHLTGPQQV 235 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cCC-cCCCceEeCCCHHHH
Confidence 3344556689998888755544 4799999999999999999 3455553 221 345689988865443
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.067 Score=56.82 Aligned_cols=44 Identities=25% Similarity=0.191 Sum_probs=39.2
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.++++.++++++++.|++.|+++.++||-....+..+-...|+.
T Consensus 103 ~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 103 IEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred hccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 35567788899999999999999999999999999999988874
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.12 Score=58.57 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=31.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 665 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~ 665 (1159)
++.||+.++++.|++.|+++.++|+-..+....+-..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~ 180 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT 180 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 5789999999999999999999999877766655443
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.048 Score=59.41 Aligned_cols=41 Identities=20% Similarity=0.194 Sum_probs=35.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCC----cHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGD----KMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD----~~eTAi~Ia~~~gl~ 669 (1159)
.+.+++.+.++.|++.|+++.++|+= ...++.++.+..|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 45556999999999999999999996 667899999889984
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.12 Score=60.15 Aligned_cols=41 Identities=15% Similarity=0.161 Sum_probs=37.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.+.+|+.++++.|+++|+++.++|+-..+.+..+-...||.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 47799999999999999999999999999999988888874
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.13 Score=50.67 Aligned_cols=41 Identities=20% Similarity=0.237 Sum_probs=34.5
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCc--------HhHHHHHHHHcCc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDK--------METAINIAYACNL 668 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~--------~eTAi~Ia~~~gl 668 (1159)
-++.+|+.++++.|+++|+++.++|+.. .+.+..+....|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999987 5666666666666
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.11 Score=57.48 Aligned_cols=41 Identities=32% Similarity=0.199 Sum_probs=36.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++-+|+.++++.|++.|+++.++||...+.+..+-...|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 46799999999999999999999999998888887777764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.11 Score=55.02 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=36.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++.+|+.++++.|++.|+++.++|+-....+..+....||
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 5789999999999999999999999888888888888886
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.1 Score=56.83 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=36.2
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeC----CcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTG----DKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTG----D~~eTAi~Ia~~~gl~ 669 (1159)
-.+.+|+.++++.|++.|+++.++|| -...|+.++.+..|+-
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 44778899999999999999999999 3466899988888883
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.16 Score=61.52 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=38.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.||+.++++.|++.|+++-++|+-..+.+..+-..+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 68899999999999999999999999999999998888874
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.22 Score=53.84 Aligned_cols=40 Identities=13% Similarity=0.159 Sum_probs=35.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++.+|+.++++.|++.|++++++|+=....+...-...|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 5789999999999999999999999877777777777776
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.19 Score=54.39 Aligned_cols=31 Identities=26% Similarity=0.339 Sum_probs=27.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETA 659 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTA 659 (1159)
++.+|+.++|+.|++.|+++.++||-.....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 5789999999999999999999998765533
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.32 Score=50.53 Aligned_cols=41 Identities=29% Similarity=0.254 Sum_probs=32.1
Q ss_pred cCcEEEEEeeecc----cccCChHHHHHHHHHcCCeEEEEeCCcH
Q 001087 616 KDLTLIGCTAIED----KLQEGVPACIETLARAGIKIWVLTGDKM 656 (1159)
Q Consensus 616 ~dl~llG~~~ieD----~lq~~v~etI~~L~~aGIkvwmLTGD~~ 656 (1159)
.|-++.|-..+.+ ++.+||+++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4556656545443 2689999999999999999999998653
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.29 Score=54.08 Aligned_cols=41 Identities=20% Similarity=0.087 Sum_probs=37.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+-....+..+-...||.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999998888888874
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.31 Score=52.77 Aligned_cols=39 Identities=15% Similarity=0.096 Sum_probs=32.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++.+|+.++++.|+ +|+++.++|+.....+...-.+.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 47899999999999 6899999999877777666666665
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.34 Score=54.23 Aligned_cols=41 Identities=27% Similarity=0.152 Sum_probs=34.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++-+|+.++++.|++.|+++.++||.....+..+-...|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56799999999999999999999999888777666666553
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.3 Score=57.57 Aligned_cols=40 Identities=13% Similarity=0.071 Sum_probs=32.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHH-HcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAY-ACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~-~~gl 668 (1159)
++.+|+.++++.|++.|+++.++|+-....+...-. ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999988777665443 4555
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.2 Score=51.34 Aligned_cols=44 Identities=18% Similarity=0.170 Sum_probs=40.3
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-..++.+|+.+.++.|++.|++++++|+-..+.........|+.
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 45688999999999999999999999999999999999988886
|
... |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.3 Score=50.84 Aligned_cols=40 Identities=25% Similarity=0.262 Sum_probs=32.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|+++|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 688999999999999999999999977776 4444446663
|
HAD subfamilies caused by an overly broad single model. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.52 Score=49.33 Aligned_cols=27 Identities=26% Similarity=0.288 Sum_probs=24.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDK 655 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~ 655 (1159)
++.+|++++++.|++.|+++.++|...
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999999999999999875
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.11 E-value=2.2 Score=49.81 Aligned_cols=63 Identities=14% Similarity=0.235 Sum_probs=42.3
Q ss_pred ecCh---hhHHHHHHHHHhccC-----c-EEEEecCCccCHHHHHh-----cccceeecCccchhhhhccceeecccccc
Q 001087 763 RVSP---LQKAQVTSLVKKGAR-----K-ITLSIGDGANDVSMIQA-----AHIGVGISGQEGMQAVMASDFAIAQFRFL 828 (1159)
Q Consensus 763 R~sP---~qK~~iV~~lk~~~g-----~-~vl~iGDG~NDv~mL~~-----AdVGIgisg~e~~qA~~asD~~i~~f~~l 828 (1159)
.+.| -.|..-|+.+-+..| . .++++||+.||-.|++. +++||.++.... .-.|+|.+.+-.-.
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~eV 369 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSEV 369 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHHH
Confidence 4455 499998888755544 1 35899999999999996 466665542111 23577887764433
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.33 Score=52.76 Aligned_cols=41 Identities=20% Similarity=0.131 Sum_probs=35.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+-..+.+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 67899999999999999999999998888777766666663
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.67 E-value=5.7 Score=46.01 Aligned_cols=200 Identities=16% Similarity=0.141 Sum_probs=99.7
Q ss_pred CcEEEEEeeecc--cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccc--h-hc-c
Q 001087 617 DLTLIGCTAIED--KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIR--D-VE-E 690 (1159)
Q Consensus 617 dl~llG~~~ieD--~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~--~-~~-~ 690 (1159)
|.+|+-++.-.| .+-++..++|+.|+ .|++++++||-......... ++ .+..++..++..-... . .. .
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~---~l--~~l~l~g~hGa~i~~p~~~~~~~~ 192 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV---KL--AELYYAGSHGMDIKGPAKGFSRHK 192 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh---cc--cCceEEEcCCcEEecCCCcceecc
Confidence 666665554333 37788899999999 78999999999999988773 33 1222222222110000 0 00 0
Q ss_pred cCC------hHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCC------c
Q 001087 691 RGD------PVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCS------S 758 (1159)
Q Consensus 691 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~------~ 758 (1159)
++. ...-+....+.+...+.+....... ..-..+.+++.+-=.......-.++...+..++.... .
T Consensus 193 ~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pG--a~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~G 270 (366)
T PLN03017 193 RVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPG--AKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQG 270 (366)
T ss_pred ccccccccccchhhHHHHHHHHHHHHHHHhcCCC--CEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCC
Confidence 000 0000111112222223222222211 1112344555543332221111223333333322221 1
Q ss_pred eEEEecCh---hhHHHHHHHHHhccC------cEEEEecCCccCHHHHHhcc---cceee-cCc-cchhhhhccceeecc
Q 001087 759 VVCCRVSP---LQKAQVTSLVKKGAR------KITLSIGDGANDVSMIQAAH---IGVGI-SGQ-EGMQAVMASDFAIAQ 824 (1159)
Q Consensus 759 vI~~R~sP---~qK~~iV~~lk~~~g------~~vl~iGDG~NDv~mL~~Ad---VGIgi-sg~-e~~qA~~asD~~i~~ 824 (1159)
--.-.+.| -+|...|+.+-+..| ..++++||-..|-.|++... -|+|| -|. .+ ..+|+|.+.+
T Consensus 271 kkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~d 347 (366)
T PLN03017 271 RKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQD 347 (366)
T ss_pred CeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCC
Confidence 11223344 499999988755432 36899999999999999774 35665 232 22 2468888876
Q ss_pred ccc
Q 001087 825 FRF 827 (1159)
Q Consensus 825 f~~ 827 (1159)
-.-
T Consensus 348 p~e 350 (366)
T PLN03017 348 PSE 350 (366)
T ss_pred HHH
Confidence 443
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.29 Score=51.14 Aligned_cols=39 Identities=18% Similarity=0.268 Sum_probs=32.5
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
-++.+|+.++++.|++.|+++.++|+- ..+..+-...|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l 125 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGL 125 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcCh
Confidence 478999999999999999999999986 555556666666
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=92.59 E-value=0.24 Score=51.79 Aligned_cols=39 Identities=21% Similarity=0.305 Sum_probs=30.4
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
.++.||+.++++.|+++|+++.++|+.. .+..+-...||
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l 124 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGL 124 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCc
Confidence 3678999999999999999999999743 23445555555
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.61 Score=48.36 Aligned_cols=53 Identities=21% Similarity=0.160 Sum_probs=42.9
Q ss_pred CcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCC-cHhHHHHHHHHcCcc
Q 001087 617 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGD-KMETAINIAYACNLI 669 (1159)
Q Consensus 617 dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD-~~eTAi~Ia~~~gl~ 669 (1159)
+-......+-+-++.+|+.++++.|+++|+++-++|+= ...++..+-...|+-
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 33455556666788999999999999999999999964 888888887777763
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=92.46 E-value=0.3 Score=55.61 Aligned_cols=45 Identities=20% Similarity=0.115 Sum_probs=40.9
Q ss_pred eecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 625 AIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 625 ~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
...+++.+++.++++.|++.|+++.++||-...++..+...+++.
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 357899999999999999999999999999999999888888774
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=92.37 E-value=3.3 Score=53.84 Aligned_cols=38 Identities=11% Similarity=0.165 Sum_probs=30.4
Q ss_pred cccCChHHHHHHH-HHcCCeEEEEeCCcHhHHHHHHHHc
Q 001087 629 KLQEGVPACIETL-ARAGIKIWVLTGDKMETAINIAYAC 666 (1159)
Q Consensus 629 ~lq~~v~etI~~L-~~aGIkvwmLTGD~~eTAi~Ia~~~ 666 (1159)
.+-+++.++++.| ++.|+.++++||-...+....-..+
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 4556778888887 6679999999999999988776543
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=92.37 E-value=0.63 Score=48.46 Aligned_cols=46 Identities=20% Similarity=0.223 Sum_probs=31.8
Q ss_pred cEEEEecCCccCHHHHHhcccc--eee-cCccchh-hhhccceeeccccc
Q 001087 782 KITLSIGDGANDVSMIQAAHIG--VGI-SGQEGMQ-AVMASDFAIAQFRF 827 (1159)
Q Consensus 782 ~~vl~iGDG~NDv~mL~~AdVG--Igi-sg~e~~q-A~~asD~~i~~f~~ 827 (1159)
.-++||||..+|+.+=++|++. |++ .|..... ....+|+++.++.-
T Consensus 124 ~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~e 173 (176)
T TIGR00213 124 AQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLAD 173 (176)
T ss_pred hhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHH
Confidence 6688999999999999999985 355 4432111 12348888876543
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=91.22 E-value=1.3 Score=45.11 Aligned_cols=34 Identities=26% Similarity=0.298 Sum_probs=30.7
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHH
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAI 660 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi 660 (1159)
+|.+.+++.++++.+++.|+++..+||-....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999998777663
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=91.07 E-value=0.92 Score=48.94 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=35.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++. +++.++|+-..+.+..+-.+.|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 6789999999999999 999999998888888888877774
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=91.03 E-value=0.67 Score=45.53 Aligned_cols=39 Identities=10% Similarity=0.109 Sum_probs=32.8
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCC-cHhHHHHHHHHcC
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGD-KMETAINIAYACN 667 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD-~~eTAi~Ia~~~g 667 (1159)
++.+|+.++++.|+++|+++.++|+- ..+.+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999998 6766666555444
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=90.80 E-value=0.85 Score=47.22 Aligned_cols=41 Identities=20% Similarity=0.292 Sum_probs=33.7
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCc-HhHHHHHHHHcCc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDK-METAINIAYACNL 668 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~-~eTAi~Ia~~~gl 668 (1159)
.++-++++++++.|++.|+++.++|+-. ...+..+.+.+|+
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3678999999999999999999999977 4556666666665
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=90.56 E-value=1.4 Score=44.91 Aligned_cols=37 Identities=16% Similarity=0.209 Sum_probs=29.9
Q ss_pred hhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccce
Q 001087 767 LQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGV 804 (1159)
Q Consensus 767 ~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI 804 (1159)
.+|..+|+.+ ++....+.+||||+-|++|-+.+|+=.
T Consensus 146 ~dK~~vI~~l-~e~~e~~fy~GDsvsDlsaaklsDllF 182 (220)
T COG4359 146 HDKSSVIHEL-SEPNESIFYCGDSVSDLSAAKLSDLLF 182 (220)
T ss_pred CCcchhHHHh-hcCCceEEEecCCcccccHhhhhhhHh
Confidence 4799999999 566677999999999988776666544
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=90.32 E-value=0.76 Score=46.28 Aligned_cols=27 Identities=30% Similarity=0.439 Sum_probs=24.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDK 655 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~ 655 (1159)
++.+|+.++++.|++.|+++.++|...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999865
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=90.26 E-value=1 Score=46.25 Aligned_cols=26 Identities=27% Similarity=0.505 Sum_probs=23.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCC
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGD 654 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD 654 (1159)
++-+|+.++++.|++.|+++.++|--
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46799999999999999999999974
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=90.20 E-value=0.84 Score=48.55 Aligned_cols=39 Identities=13% Similarity=0.123 Sum_probs=30.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++-+|+.++++.|+++|+++.++|+-... +..+-...|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 68899999999999999999999975443 3445555555
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=90.09 E-value=1 Score=45.42 Aligned_cols=40 Identities=18% Similarity=0.310 Sum_probs=33.0
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 666 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~ 666 (1159)
+.+..+|+.++++.|++.|+++.++|+-..+.+...-+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4455689999999999999999999998888777655543
|
HAD subfamilies caused by an overly broad single model. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.06 E-value=1.2 Score=51.43 Aligned_cols=26 Identities=27% Similarity=0.406 Sum_probs=24.4
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeC
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTG 653 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTG 653 (1159)
-++.||+.++++.|+++|+++.++|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 46789999999999999999999998
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=87.95 E-value=3.1 Score=45.84 Aligned_cols=49 Identities=20% Similarity=0.329 Sum_probs=39.3
Q ss_pred EEecChh--hHHHHHHHHHhccCcEEEEecC----CccCHHHHHh-cccceeecCccc
Q 001087 761 CCRVSPL--QKAQVTSLVKKGARKITLSIGD----GANDVSMIQA-AHIGVGISGQEG 811 (1159)
Q Consensus 761 ~~R~sP~--qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~-AdVGIgisg~e~ 811 (1159)
+..+.|. .|+.-++.+ + ...-|++.|| |.||.+||+. -=.|+.++|-+.
T Consensus 180 ~iDi~~~gvnKg~al~~L-~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 180 SFDVFPQGWDKTYCLQFL-E-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEeeCCCCHHHHHHHh-c-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 3344543 899999999 4 6778999999 9999999996 777888887654
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=87.66 E-value=2.4 Score=47.10 Aligned_cols=43 Identities=12% Similarity=0.175 Sum_probs=31.7
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhH---HHHHHHHcCcc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMET---AINIAYACNLI 669 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eT---Ai~Ia~~~gl~ 669 (1159)
..++-+|+.+.++.|++.|+++.++|+-.... ....-+..|+-
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 44577999999999999999999999965332 33333445553
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=87.44 E-value=0.7 Score=46.64 Aligned_cols=43 Identities=14% Similarity=0.022 Sum_probs=37.3
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
..-+++||+.+.++.|+ .++++.+.|.=..+.|..+-..+++.
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34468999999999999 57999999999999999988877763
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=86.20 E-value=2.1 Score=44.17 Aligned_cols=26 Identities=31% Similarity=0.496 Sum_probs=23.2
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCc
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDK 655 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~ 655 (1159)
+-+|+.++++.|+++|+++.++|.-.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~ 68 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQS 68 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 34999999999999999999999743
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=85.92 E-value=31 Score=38.09 Aligned_cols=49 Identities=10% Similarity=0.114 Sum_probs=39.0
Q ss_pred EEeeecccccCChHHHHHHHHHcCCeEEEEeC---CcHhHHHHHHHHcCccc
Q 001087 622 GCTAIEDKLQEGVPACIETLARAGIKIWVLTG---DKMETAINIAYACNLIN 670 (1159)
Q Consensus 622 G~~~ieD~lq~~v~etI~~L~~aGIkvwmLTG---D~~eTAi~Ia~~~gl~~ 670 (1159)
|++.-.+.+=+++.++|+.|++.|++++++|| -..+.......+.|+-.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44445567778999999999999999999997 55777777777788743
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=85.18 E-value=2.8 Score=45.31 Aligned_cols=39 Identities=15% Similarity=0.280 Sum_probs=32.0
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHH
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAY 664 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~ 664 (1159)
.+-++.+|+.++++.|+++|+++.++|.........+-.
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~ 130 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFG 130 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh
Confidence 345789999999999999999999999987765555443
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=85.02 E-value=1.4 Score=47.17 Aligned_cols=29 Identities=31% Similarity=0.340 Sum_probs=25.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHh
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKME 657 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~e 657 (1159)
++.+|+.++++.|++.|+++.++|.....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 57899999999999999999999986543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=83.37 E-value=3.7 Score=54.96 Aligned_cols=41 Identities=17% Similarity=0.017 Sum_probs=36.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.+-+|+.++++.|+++|+++.++|+-..+.+..+-.+.|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 46799999999999999999999998888888777777774
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=81.40 E-value=3.3 Score=47.68 Aligned_cols=37 Identities=16% Similarity=0.227 Sum_probs=32.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 665 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~ 665 (1159)
++-+|+.++|+.|++.|+++.+.|.-..+.|..+-..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 4568999999999999999999999988888887765
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=81.38 E-value=6.2 Score=43.32 Aligned_cols=48 Identities=6% Similarity=0.099 Sum_probs=36.4
Q ss_pred EEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHH--HHHHHcCcc
Q 001087 622 GCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAI--NIAYACNLI 669 (1159)
Q Consensus 622 G~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi--~Ia~~~gl~ 669 (1159)
|.+.-.+++-||++++++.|+++|+++.++|.-....+. ....+.|+-
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 556667788999999999999999999999994443332 344566663
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=80.90 E-value=6.8 Score=42.63 Aligned_cols=41 Identities=12% Similarity=0.172 Sum_probs=33.9
Q ss_pred cccCChHHHHHHH--HHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETL--ARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L--~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
|+.+|.++.++.+ ++.|+.+.++|-=|..--..|=+.-||-
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 5779999999999 4589999999988877777777777764
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1159 | ||||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 6e-08 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 6e-07 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 6e-07 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 5e-06 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-05 |
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1159 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 8e-34 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-32 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-29 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 7e-18 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 3e-17 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 3e-14 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 7e-06 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 2e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 4e-05 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 4e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 4e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 5e-05 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-04 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 5e-04 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 7e-04 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 8e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 8e-34
Identities = 103/481 (21%), Positives = 150/481 (31%), Gaps = 125/481 (25%)
Query: 346 EELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSV 405
E LG I SDKTGTLT+N M I+ TE
Sbjct: 375 ETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTE-------------------- 414
Query: 406 KAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAIC-HTVLPEGDESPERITYQAA- 463
+ G FD + + + R L +C G ++
Sbjct: 415 ---DQSGQTFD------------QSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIG 459
Query: 464 SPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQS 523
E AL+ ++ + + + + + FNST K Q
Sbjct: 460 DASETALLKFSELTLG---------------NAMGYRE----RFPKVCEIPFNSTNKFQL 500
Query: 524 VVCRY---ADGRLVLYCKGADSVIYER----LANG-----NEDLKKVTREHLEQFGSSGL 571
+ D R VL KGA + ER L G +E ++ + G G
Sbjct: 501 SIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGE 560
Query: 572 RTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQ 631
R L LS Y E L+ G ++ D +
Sbjct: 561 RVLGFCQLYLSEKDYPPGYA--------------FDVEAMNFPTSGLSFAGLVSMIDPPR 606
Query: 632 EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEER 691
VP + AGI++ ++TGD TA IA + II+ + + D+ R
Sbjct: 607 ATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVG---------IISEGSETVEDIAAR 657
Query: 692 GDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPS-LRVILL 750
R ++ I+G +L +DPS L L
Sbjct: 658 --------------LRVPVDQVNRKDARACVINGMQLK----------DMDPSELVEALR 693
Query: 751 NLSLNCSSVVCCRVSPLQKAQ-VTSLVKKGARKITLSIGDGANDVSMIQAAHIGV--GIS 807
+V R SP QK V S + G I GDG ND ++ A IGV GI+
Sbjct: 694 TH----PEMVFARTSPQQKLVIVESCQRLG--AIVAVTGDGVNDSPALKKADIGVAMGIA 747
Query: 808 G 808
G
Sbjct: 748 G 748
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 1e-32
Identities = 108/480 (22%), Positives = 154/480 (32%), Gaps = 123/480 (25%)
Query: 346 EELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSV 405
E LG I SDKTGTLT+N M +I+ TE + G
Sbjct: 370 ETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSG---------------- 413
Query: 406 KAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAIC-HTVLPEGDESPERITYQAA- 463
F+ R A+C V G ++ + A
Sbjct: 414 -----AAFDKTSATW--------------SALSRIAALCNRAVFQAGQDNVPILKRSVAG 454
Query: 464 SPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQS 523
E+AL+ + V+ M + + FNST K Q
Sbjct: 455 DASESALLKCIELCCG---------------SVQGMRD----RNPKIVEIPFNSTNKYQL 495
Query: 524 VVCRY---ADGRLVLYCKGADSVIYER----LANG-----NEDLKKVTREHLEQFGSSGL 571
+ ++ R +L KGA I +R L NG ED+K+ + + G G
Sbjct: 496 SIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGE 555
Query: 572 RTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQ 631
R L + L D Y + + DL +G A+ D +
Sbjct: 556 RVLGFCHFALPEDKYN--------------EGYPFDADEPNFPTTDLCFVGLMAMIDPPR 601
Query: 632 EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEER 691
VP + AGIK+ ++TGD TA IA II+ I D+ R
Sbjct: 602 AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG---------IISEGNETIEDIAAR 652
Query: 692 GDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLN 751
+ R+ A ++ G L L IL
Sbjct: 653 LNIPIGQVNPRDAK-----------------------ACVVHGSDLKDLSTEVLDDILHY 689
Query: 752 LSLNCSSVVCCRVSPLQKAQ-VTSLVKKGARKITLSIGDGANDVSMIQAAHIGV--GISG 808
+ +V R SP QK V ++G I GDG ND ++ A IGV GISG
Sbjct: 690 H----TEIVFARTSPQQKLIIVEGCQRQG--AIVAVTGDGVNDSPALKKADIGVAMGISG 743
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 2e-29
Identities = 99/479 (20%), Positives = 146/479 (30%), Gaps = 120/479 (25%)
Query: 346 EELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSV 405
E LG I SDKTGTLT N M K I ++ G + E + TG
Sbjct: 341 ETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSI---TG---------- 387
Query: 406 KAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAIC-HTVLPEGDESPERITYQAA- 463
+ + L D E A+C + L D + + Y+
Sbjct: 388 -----STYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSL---DFNETKGVYEKVG 439
Query: 464 SPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQS 523
E AL T + F R + + + + LEF+ RK S
Sbjct: 440 EATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQL---MKKEFTLEFSRDRKSMS 496
Query: 524 VVCRYADGRL-----VLYCKGA-DSVI----YERLANGNEDLKKVTREHLEQ------FG 567
V C A ++ KGA + VI Y R+ + +E + G
Sbjct: 497 VYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG 556
Query: 568 SSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIE 627
LR L LA RD P E + E DLT +G +
Sbjct: 557 RDTLRCLALATRDTPPKREEMVLDD---------------SSRFMEYETDLTFVGVVGML 601
Query: 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRD 687
D ++ V I+ AGI++ ++TGD TAI I
Sbjct: 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC------------------------ 637
Query: 688 VEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPS-LR 746
R + + + + +G + L + R
Sbjct: 638 -------------------RRIGIFGENEEVADRAYTGREFD----------DLPLAEQR 668
Query: 747 VILLNLSLNCSSVVCCRVSPLQKAQ-VTSLVKKGARKITLSIGDGANDVSMIQAAHIGV 804
RV P K++ V L +IT GDG ND ++ A IG+
Sbjct: 669 EACRRAC------CFARVEPSHKSKIVEYLQSYD--EITAMTGDGVNDAPALKKAEIGI 719
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 7e-18
Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 27/191 (14%)
Query: 507 YEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQF 566
++ L FN KR ++ G KGA I E N+ KKV ++++
Sbjct: 392 IREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKV-LSIIDKY 450
Query: 567 GSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAI 626
GLR+L +A + + ++ E +G +
Sbjct: 451 AERGLRSLAVARQVVP-------------------------EKTKESPGAPWEFVGLLPL 485
Query: 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK-QFIITSETNAI 685
D + I G+ + ++TGD++ + N ++ + +A
Sbjct: 486 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDAN 545
Query: 686 RDVEERGDPVE 696
+ +E
Sbjct: 546 LASIPVEELIE 556
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 3e-17
Identities = 88/590 (14%), Positives = 169/590 (28%), Gaps = 167/590 (28%)
Query: 494 SHVEKMGKMQDVC--YEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANG 551
++ + + V Y++L F+ K+ V G + KGA + + +
Sbjct: 428 KSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEED 487
Query: 552 ---NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLD 608
E++ + + + +F + G R+L +A +
Sbjct: 488 HPIPEEVDQAYKNKVAEFATRGFRSLGVARKR---------------------------- 519
Query: 609 EVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668
E ++G D + + G+ I +LTGD + A + L
Sbjct: 520 -----GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL 574
Query: 669 INNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKL 728
N I +E + + E+ ++ A
Sbjct: 575 GTN-----IYNAERLGLGGGGDMPG-------------SEVYDFVEAA------------ 604
Query: 729 ALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQ-VTSLVKKGARKITLSI 787
DG +A V P K V L ++G +
Sbjct: 605 ----DG----FA----------------------EVFPQHKYNVVEILQQRG--YLVAMT 632
Query: 788 GDGANDVSMIQAAHIGVGISGQEGMQAVMASDFA--IAQFRFLTDLLLV------HGRWS 839
GDG ND ++ A G+ + G +SD A A FL L R
Sbjct: 633 GDGVNDAPSLKKADTGIAVEG--------SSDAARSAADIVFLAPGLGAIIDALKTSRQI 684
Query: 840 YLRICKVVLYFFYKN------LTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPV 893
+ R+ V+Y + L + + ++ IF +
Sbjct: 685 FHRMYAYVVYRIALSIHLEIFLGLWIAILNRSLNI-----------ELVVFIAIFADVAT 733
Query: 894 IMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAF---FSVYQSLVLYNCVTTS 950
+ + S + P W + +W V ++ + VTT
Sbjct: 734 LAIAYDNAPYS-----QTPV-----------KWNLPKLWGMSVLLGVVLAVGTWITVTTM 777
Query: 951 SATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFV- 1009
A G+N G + ++ + F + +T N + T + + SI +W L
Sbjct: 778 YAQGEN-GGIVQNFGNMDEVLFLQISLTENWLIF---ITRANGPFWS---SIPSWQLSGA 830
Query: 1010 FLYTGIMTPNDRQENVFFVIFVLMSTFYFYFTLILVPVLALLGDFIFQGV 1059
I+ F + + ++ + + + I GV
Sbjct: 831 IFLVDILAT------CFTIWGWFEHSDTSIVAVVRIWIFSFGIFCIMGGV 874
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 3e-14
Identities = 26/123 (21%), Positives = 38/123 (30%), Gaps = 31/123 (25%)
Query: 515 FNSTRKRQSVVCRYADGRLVLYCKGADSVIYER----LANG-----NEDLKKVTREHLEQ 565
F+ R+R SVV L CKGA I NG ++ + + + +
Sbjct: 64 FDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDT 123
Query: 566 FGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTA 625
GLR + +A + L + E DL L G A
Sbjct: 124 LNRQGLRVVAVATKYLPAR----------------------EGDYQRADESDLILEGYIA 161
Query: 626 IED 628
D
Sbjct: 162 FLD 164
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 71.0 bits (173), Expect = 2e-12
Identities = 83/721 (11%), Positives = 182/721 (25%), Gaps = 243/721 (33%)
Query: 88 KLQVGDIVMVKQDGFFPADLLFLASTNADGVCY-IETANLDGETNLKIRKALERTWDYLT 146
+ Q DI+ V +D F + D C ++ D ++ ++ ++
Sbjct: 15 QYQYKDILSVFEDAFV-DNF--------D--CKDVQ----DMPKSILSKEEIDHIIMSKD 59
Query: 147 PEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIF 206
+ + + F ++ ++P + R S+ YI
Sbjct: 60 AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI------ 113
Query: 207 AGHETKVMMNSMNIPSKRS-TLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLG 265
+ + N + +K + + + KL AL + +
Sbjct: 114 --EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLE-----------------LRPAKNVL 154
Query: 266 LHNM---GNSV------EDDQFNPDKRFLVFVLNMFTLITLYSPIIPI-SLYVSIETIKF 315
+ + G + + F +F LN+ + + + + L I+
Sbjct: 155 IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID---- 210
Query: 316 FQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLM-------- 367
+ + S+ ++ + ++ ++ + K L+
Sbjct: 211 -----------PNWTSRSDHSSNIK-LRIHSIQAELRRLLKSKP--YENCLLVLLNVQNA 256
Query: 368 ----EF-FKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLR 422
F C I +T + V H
Sbjct: 257 KAWNAFNLSCKIL-------LTTRFKQVTDFLSAATTTHISLDH--HSMTLT-------- 299
Query: 423 GAWRNEHNPDACKEFF-RCLAICHTVLPEGDESPERITYQAA--SPDEAALVTAAKNFGF 479
PD K + L LP + +P +++
Sbjct: 300 --------PDEVKSLLLKYLDCRPQDLPR----------EVLTTNPRRLSIIAE------ 335
Query: 480 FFYRRTPTMI-YVRESHVEKMGKMQDVCYEILN-----------------------VLEF 515
R + + +K+ + + +L +L
Sbjct: 336 -SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL 394
Query: 516 --------------NSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTRE 561
N K V + + + + IY L E+ + R
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP----S--IYLELKVKLENEYALHRS 448
Query: 562 HLEQFGSSGLRTLCLAYRDLSP---DMY---------------ERWNE--------KFIQ 595
++ + + +T DL P D Y ER +F++
Sbjct: 449 IVDHY--NIPKTFD--SDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE 504
Query: 596 AKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDK 655
K + +I + LQ+ +K + K
Sbjct: 505 QK---------------IRHDSTAWNASGSILNTLQQ-------------LKFY-----K 531
Query: 656 METAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIA-----RFMREEVKRELN 710
N L+N + F+ E N I + D + IA + EE +++
Sbjct: 532 PYICDNDPKYERLVN-AILDFLPKIEENLICS--KYTDLLRIALMAEDEAIFEEAHKQVQ 588
Query: 711 K 711
+
Sbjct: 589 R 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 67.6 bits (164), Expect = 2e-11
Identities = 90/723 (12%), Positives = 190/723 (26%), Gaps = 247/723 (34%)
Query: 495 HVE-KMGKMQDVCYEILNVLE--FNSTRKRQSVVCRYADG--RLVLYCKGADSVIYER-- 547
H++ + G+ Q +IL+V E F + C+ + +L + D +I +
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAF-----VDNFDCKDVQDMPKSILSKEEIDHIIMSKDA 60
Query: 548 -----------LANGNEDLKKVTREHLEQ---FGSSGLRTLCLAYRDLSPDMYER----- 588
L+ E ++K E L F S ++T + MY
Sbjct: 61 VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ-PSMMTRMYIEQRDRL 119
Query: 589 WNEKFIQAKSSLRDREQKLDEVAELI-----EKDLTLIG-------CTAIEDKLQEGVPA 636
+N+ + AK ++ R Q ++ + + K++ + G A++
Sbjct: 120 YNDNQVFAKYNVS-RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD--------V 170
Query: 637 C--IETLARAGIKI-WVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGD 693
C + + KI W +N+ CN ++ + + R D
Sbjct: 171 CLSYKVQCKMDFKIFW----------LNLKN-CNSPETVLEM-LQKLLYQIDPNWTSRSD 218
Query: 694 PVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLS 753
+ ++ EL + + + Y + + L++ + +
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKS-KPYENCL------LVLLNVQ-----NAK---AWNAFN 263
Query: 754 LNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGM- 812
L+C ++ R QVT + +S+ H + ++ E
Sbjct: 264 LSCKILLTTR-----FKQVTDFLSAATTT----------HISLD---HHSMTLTPDEVKS 305
Query: 813 ---------------QAVMASDFAIAQF-RFLTDLLLVHGRWSYLRICKVVLYFFYKNLT 856
+ + + ++ + D L W + + LT
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL---ATWDNWK------HVNCDKLT 356
Query: 857 FTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQ 916
+ ++ +D L +F P
Sbjct: 357 TIIESS-LNVLEPAEYRKMFDR-----------------LSVFPPSA------HIPT--- 389
Query: 917 EGIKNVFFTWRVVAI-WAFFSVYQS-LVLYNCVTTSSATGQNSSGKIFGIWDVSTMAFTC 974
++++ W +V+ S Q I I +
Sbjct: 390 ----------ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI-SIPSIY------ 432
Query: 975 VVVTVNLRLLMMCNTITRFH------------YITVGGSILAWFLFVFLYTGI-MTPNDR 1021
L L + H + + + + + G + +
Sbjct: 433 ------LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH 486
Query: 1022 QENVFFVIFVLMSTFYFYFTLI-------------LVPVLALLGDFIFQGVQRWFSPYDY 1068
E L + F + +L L F Y
Sbjct: 487 PER-----MTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF---------YKP 532
Query: 1069 QIVQEMHRHDPEDRRM--------------------ADLVEIGNQLTPEEARSYAIA--Q 1106
I +DP+ R+ DL+ I L E+ + A Q
Sbjct: 533 YIC----DNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIA--LMAEDEAIFEEAHKQ 586
Query: 1107 LPR 1109
+ R
Sbjct: 587 VQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 8e-09
Identities = 74/527 (14%), Positives = 154/527 (29%), Gaps = 182/527 (34%)
Query: 343 NLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVE 402
+++ E G+ +Y + D ++ F C + ++ + + + E++
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCK--------DVQDMPKSI-----LSKEEID 52
Query: 403 RSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQA 462
+ + LR F L E + +
Sbjct: 53 HIIMSKDA------VSGTLR--------------LFWTL----------LSKQEEMVQKF 82
Query: 463 ASPDEAALVTAAKNFGFFFYR-----RTPTMIYVR-ESHVEKMGKMQDVCYEILNVLEFN 516
E L N+ F R P+M+ +++ V + NV
Sbjct: 83 V---EEVL---RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV-FAKYNV---- 131
Query: 517 STRKRQSVVCRYA------DGRLVLY---------------------CKGADSVIYERLA 549
+R + + R A +++ CK + + L
Sbjct: 132 -SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190
Query: 550 NGNEDLKKVTREHLEQFGSSGLRTLCL-------AYRDLSPDMYERWNEKFIQAKSSLRD 602
N N LE L+ L + D S ++ R + + + L+
Sbjct: 191 NCNSP-----ETVLEM-----LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 603 REQK-----LDEV--AELIEK-DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGD 654
+ + L V A+ + + C KI + T
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFN---LSC-----------------------KILLTTRF 274
Query: 655 KMET-AINIAYACNLINNEMKQFIITSETNAI----RDVEERGDPVE-----------IA 698
K T ++ A ++ + + E ++ D + P E IA
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334
Query: 699 RFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPS-LRVILLNLSL--- 754
+R+ + + H ++ +KL II+ L L+P+ R + LS+
Sbjct: 335 ESIRDGLAT--------WDNWKH-VNCDKLTTIIE-SSLN-VLEPAEYRKMFDRLSVFPP 383
Query: 755 --NCSSVVCCRV----------SPLQKAQVTSLVKKGARKITLSIGD 789
+ +++ + + K SLV+K ++ T+SI
Sbjct: 384 SAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS 430
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 4e-05
Identities = 63/391 (16%), Positives = 117/391 (29%), Gaps = 130/391 (33%)
Query: 21 LMISILSTTPMS-PVNPVTNVVPLSLVLLVSLIKEA---WEDWKRFQND--MTINSTPVE 74
L++ L P P V P L ++ I++ W++WK D TI + +
Sbjct: 306 LLLKYLDCRPQDLPRE-VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 75 VLQGQRWVSIP--WRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNL 132
VL+ P +RK+ + + FP
Sbjct: 365 VLE-------PAEYRKMFD-RLSV------FPPS-------------------------A 385
Query: 133 KI-RKALERTWDYLTPEKASEF------KGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPN 185
I L W + V+ +QP S + +
Sbjct: 386 HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE-KQPKESTIS-------------IPSI 431
Query: 186 QILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVM 245
+ L+ L N + H + +++ NIP D L
Sbjct: 432 YLELK-VKLENEYAL--------H--RSIVDHYNIPKT-----FDSDDL----------- 464
Query: 246 CLICAIGSAIFIDKKHY-YLGLH--NMGNSVEDDQFNP---DKRFLVFVLNMFTLITLYS 299
++D+ Y ++G H N+ + F D RFL + +
Sbjct: 465 -------IPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRH----DSTA 513
Query: 300 PIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVE--YIFSD 357
S+ +++ +KF++ YI + Y + + + L ++E I S
Sbjct: 514 WNASGSILNTLQQLKFYK--PYICDNDPKYE--------RLVNAILDFLPKIEENLICSK 563
Query: 358 KTGTLTRNLMEFFKCSIGGEIYGTGITEIER 388
T L LM + I+ +++R
Sbjct: 564 YTDLLRIALM-----AEDEAIFEEAHKQVQR 589
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 7e-06
Identities = 26/209 (12%), Positives = 55/209 (26%), Gaps = 28/209 (13%)
Query: 638 IETLARAGIKIWVLTGDKMETAIN--------IAYACNLINNEMKQFIITSETNAIRDVE 689
+E L G+ + +T K + I + + V
Sbjct: 25 LERLRALGVPVVPVTA-KTRKEVEALGLEPPFIVENGGGLYLPRDWPVRAGRPKGGYRVV 83
Query: 690 ERGDPVEIARFMREEVKRELNKCI-------DEAQQYIHSISGEKLALIIDGKCLMYALD 742
P R E + + I EA + +S E + +
Sbjct: 84 SLAWPYRKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETLVL 143
Query: 743 PSLRVILLNLSLNCSSVVCCRVSPL-------QKAQ-----VTSLVKKGARKITLSIGDG 790
V + +L + K + + + +GD
Sbjct: 144 CPEEVEAVLEALEAVGLEWTHGGRFYHAAKGADKGRAVARLRALWPDPEEARFAVGLGDS 203
Query: 791 ANDVSMIQAAHIGVGISGQEGMQAVMASD 819
ND+ + +A + V + + + V+A+
Sbjct: 204 LNDLPLFRAVDLAVYVGRGDPPEGVLATP 232
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-05
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 784 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLL 832
T+++GDGAND+SM + A + + + ++ +D I + R L ++L
Sbjct: 162 TVAVGDGANDISMFKKAGLKIAFCAKPILKE--KADICI-EKRDLREIL 207
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 784 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLL 832
++ GDGAND+ M++ A G+ + ++ I + LL
Sbjct: 265 IIACGDGANDLPMLEHAGTGIAWKAKPVVRE--KIHHQI-NYHGFELLL 310
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 784 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLL 832
TL +GDGAND+SM + AHI + + +E ++ + I L +
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIAFNAKEVLKQ--HATHCI-NEPDLALIK 206
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 4e-05
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 784 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMA-SDFAIAQFRFLTDLL 832
+ IGDGA D+ A +G G Q V + + I F L L
Sbjct: 174 IIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 4e-05
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 784 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLL 832
T+++GDGAND+ M+ AA +GV + ++A + A+ +F L ++
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVAYHAKPKVEA--KAQTAV-RFAGLGGVV 309
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 5e-05
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 784 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLL 832
T+++GDGAND+ M+ AA +G+ + + ++ +D ++ +L +L
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIAFNAKPALRE--VADASL-SHPYLDTVL 387
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 3e-04
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 590 NEKFIQAKS-SLRDREQKLDEVAE------LIEKDLTLIGCTAIEDKLQEGVPACIETLA 642
N + +Q +K DE+ + D + +ED ++ P I L
Sbjct: 508 NARLMQEHGGDNAPLFEKADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQ 567
Query: 643 RAGIKIWVLTGDKMETAINIA 663
++GI+I +LTGD TA +A
Sbjct: 568 QSGIEIVMLTGDSKRTAEAVA 588
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 5e-04
Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 590 NEKFIQAKSSLRDREQKLDEVAE---LIEKDLTLIGCTAIEDKLQEGVPACIETLARAGI 646
+ + + + +KL+ A+ ++ ++ + G A+ D L+E ++ L R GI
Sbjct: 415 EDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGI 474
Query: 647 KIWVLTGDKMETAINIA 663
K+ ++TGD +A I+
Sbjct: 475 KVGMITGDNWRSAEAIS 491
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 7e-04
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 784 TLSIGDGANDVSMIQAAHIGV 804
++ GD ND +M+ AH G+
Sbjct: 148 VIAAGDSYNDTTMLSEAHAGI 168
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 8e-04
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 613 LIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIA 663
+ + I I D + + +E L G+KI +L+GDK + ++
Sbjct: 120 AVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELS 170
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1159 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.83 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.86 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.81 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.8 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.71 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.71 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.53 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.95 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.8 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.69 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.64 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.62 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.54 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.53 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.46 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.43 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.41 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.37 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.31 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.31 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.3 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.3 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.22 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.21 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.18 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.15 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.12 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.08 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.05 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.0 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 97.98 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.96 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 97.95 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.91 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 97.86 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 97.82 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 97.81 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 97.78 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 97.75 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.75 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.7 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.69 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 97.68 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 97.66 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.64 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.63 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.62 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.61 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 97.6 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.59 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 97.58 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.53 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.53 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.5 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.49 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 97.46 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.44 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 97.44 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 97.43 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.4 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 97.38 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.37 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.34 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.34 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.32 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.32 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.28 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.24 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.24 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.21 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.21 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.21 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.19 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.14 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.13 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.08 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.05 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.02 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 96.98 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 96.98 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 96.97 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 96.94 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 96.93 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 96.91 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 96.89 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.87 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 96.73 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 96.71 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 96.7 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 96.7 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 96.66 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 96.63 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 96.62 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 96.52 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 96.49 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 96.45 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 96.32 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.26 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.26 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 96.25 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 96.23 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 96.17 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 95.82 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 95.69 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 95.6 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 95.59 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 95.54 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 95.54 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 95.35 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.19 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 95.08 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 95.05 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 95.02 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 95.01 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 94.81 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 94.7 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 94.69 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 94.68 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 94.63 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 94.22 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 94.2 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 94.1 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 94.02 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 93.68 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 93.5 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 93.44 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 93.42 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 93.27 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 92.87 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 92.57 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 92.27 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 91.99 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 91.86 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 91.8 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 91.77 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 91.66 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 91.13 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 90.05 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 85.31 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 84.59 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 84.25 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 82.02 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 81.64 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 80.3 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-107 Score=1053.71 Aligned_cols=874 Identities=20% Similarity=0.215 Sum_probs=642.6
Q ss_pred HHHhh--hhhhHHHHHHHHHHhhcc-cccc------cccchhhhHHHHHHHHHHHHHHHHHHHhhh---hHhhccceEEE
Q 001087 8 KGCLN--RRVANCYFLMISILSTTP-MSPV------NPVTNVVPLSLVLLVSLIKEAWEDWKRFQN---DMTINSTPVEV 75 (1159)
Q Consensus 8 k~L~~--~~~~n~yfl~i~il~~i~-~s~~------~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~---d~~~n~~~~~V 75 (1159)
+.|++ +++.|+++++.+++++++ +.+. .|+..++ ++++++++++.+.++++|..++ .+++++.+++|
T Consensus 52 ~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V 130 (995)
T 3ar4_A 52 ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFV-ILLILIANAIVGVWQERNAENAIEALKEYEPEMGKV 130 (995)
T ss_dssp HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHH-HHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEE
Confidence 44555 889999999999999987 4431 2333333 3345556666677777776554 34556789999
Q ss_pred eeCCe--EEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhccc
Q 001087 76 LQGQR--WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEF 153 (1159)
Q Consensus 76 ~r~g~--~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~ 153 (1159)
+|+|+ .++|+|++|+|||||+|++||.||||++|+++++ +.|+||||+|||||+|+.|++.+..
T Consensus 131 ~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LTGES~pv~K~~~~~~------------ 196 (995)
T 3ar4_A 131 YRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGESVSVIKHTEPVP------------ 196 (995)
T ss_dssp EBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHHCCCSCEEECCSCCC------------
T ss_pred EeCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEee--ceEEEEcccccCCCcceeccccccC------------
Confidence 99887 6999999999999999999999999999987654 5699999999999999999876421
Q ss_pred ceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhh---hccCCCCCCcCHHHHH
Q 001087 154 KGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVM---MNSMNIPSKRSTLERK 230 (1159)
Q Consensus 154 ~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~---~n~~~~~~k~s~l~~~ 230 (1159)
.| ...+.+.+|++++||.+.+ |+++|+|++||++|+++ +....++.++||+|+.
T Consensus 197 -------~~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~tplq~~ 253 (995)
T 3ar4_A 197 -------DP---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQK 253 (995)
T ss_dssp -------CT---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEECGGGSHHHHHHHHHHTCCCCCCHHHHH
T ss_pred -------Cc---------------ccCcccccceEecCCEEEc-ceEEEEEEEcCcchHHHHHHHHhhcCCCCCCcHHHH
Confidence 00 1124567788999999886 67999999999999764 4455778889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHH
Q 001087 231 LDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSI 310 (1159)
Q Consensus 231 ~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i 310 (1159)
+|++..+++.+++++|++.++++..+.... + . ...........|..++++++.+||++||+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------~-~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~v 316 (995)
T 3ar4_A 254 LDEFGEQLSKVISLICVAVWLINIGHFNDP-V---------------H-GGSWIRGAIYYFKIAVALAVAAIPEGLPAVI 316 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTGGGGGSC-S---------------S-SSCHHHHHHHHHHHHHHHHHHHSCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccc-c---------------c-cchHHHHHHHHHHHHHHHHHHhcCcchHHHH
Confidence 999999999888888777655432111000 0 0 0000112233566788999999999999999
Q ss_pred HHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhh
Q 001087 311 ETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGV 390 (1159)
Q Consensus 311 ~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~ 390 (1159)
+++.+++ +.++ +++++++|+++.+|+||++++||||||||||+|+|+|++|++.+..++.... .....
T Consensus 317 t~~la~~-~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~-~~~~~ 384 (995)
T 3ar4_A 317 TTCLALG-TRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCS-LNEFS 384 (995)
T ss_dssp HHHHHHH-HHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEE-EEEEE
T ss_pred HHHHHHH-HHHh----------ccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccc-cceee
Confidence 9999999 8887 6889999999999999999999999999999999999999987654432100 00000
Q ss_pred hhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHH
Q 001087 391 AQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAAL 470 (1159)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Al 470 (1159)
.. + .++.+.......+........+.+.+++.++++||++.++.+++.+. ....+||+|.||
T Consensus 385 ~~--~---------------~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~-~~~~g~p~E~Al 446 (995)
T 3ar4_A 385 IT--G---------------STYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGV-YEKVGEATETAL 446 (995)
T ss_dssp EC--C---------------SSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTE-EEEESCHHHHHH
T ss_pred cc--C---------------CCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCc-eeecCCccHHHH
Confidence 00 0 00000000000000111122345778999999999988754432222 223489999999
Q ss_pred HHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCC-----cEEEEEecchhHHH
Q 001087 471 VTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADG-----RLVLYCKGADSVIY 545 (1159)
Q Consensus 471 v~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g-----~~~l~~KGA~~~i~ 545 (1159)
+.+|++.|+ +. +....+...+..... ....+..|++++.+||+|+||||||+++.++| ++.+|+||||+.|+
T Consensus 447 ~~~a~~~g~-~~-~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il 523 (995)
T 3ar4_A 447 TTLVEKMNV-FN-TEVRNLSKVERANAC-NSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVI 523 (995)
T ss_dssp HHHHHHHCT-TC-CCCTTSCTTTSTTHH-HHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHH
T ss_pred HHHHHHcCC-cc-ccccccccccccccc-hhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHH
Confidence 999999987 21 110000000000000 00013569999999999999999999998776 68999999999999
Q ss_pred HHhhcC---------ChhhHHHHHHHHHHH--hhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 001087 546 ERLANG---------NEDLKKVTREHLEQF--GSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELI 614 (1159)
Q Consensus 546 ~~~~~~---------~~~~~~~~~~~l~~~--a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~i 614 (1159)
++|... +++.++.+.+++++| +++|+|||++|||+++.++. ...+.+ ...++.+
T Consensus 524 ~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~----------~~~~~~-----~~~~~~~ 588 (995)
T 3ar4_A 524 DRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE----------EMVLDD-----SSRFMEY 588 (995)
T ss_dssp HTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG----------GCCTTC-----GGGHHHH
T ss_pred HhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccc----------cccccc-----chhhhhh
Confidence 999741 234567788999999 99999999999999864320 111111 1234678
Q ss_pred hcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCCh
Q 001087 615 EKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDP 694 (1159)
Q Consensus 615 E~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~ 694 (1159)
|+||+|+|+++++|++|+|++++|+.|+++||++||+|||+.+||.+||++|||...+...
T Consensus 589 e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i------------------- 649 (995)
T 3ar4_A 589 ETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV------------------- 649 (995)
T ss_dssp TCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCC-------------------
T ss_pred ccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcc-------------------
Confidence 9999999999999999999999999999999999999999999999999999997643210
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHH
Q 001087 695 VEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTS 774 (1159)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~ 774 (1159)
...+++|+++..+.++++.+.+. +..+|||++|+||+++|+
T Consensus 650 ---------------------------------~~~~~~g~~~~~l~~~~~~~~~~------~~~v~~r~~P~~K~~~v~ 690 (995)
T 3ar4_A 650 ---------------------------------ADRAYTGREFDDLPLAEQREACR------RACCFARVEPSHKSKIVE 690 (995)
T ss_dssp ---------------------------------TTTEEEHHHHHTSCHHHHHHHHH------HCCEEESCCSSHHHHHHH
T ss_pred ---------------------------------cceEEEchhhhhCCHHHHHHHHh------hCcEEEEeCHHHHHHHHH
Confidence 01256777776655544444332 356999999999999999
Q ss_pred HHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHH
Q 001087 775 LVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFY 852 (1159)
Q Consensus 775 ~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~ 852 (1159)
.+| +.|++|+|||||+||+|||++|||||++ +|++. |+++||+++.++++.... ++.|||++|+|+++++.|.++
T Consensus 691 ~l~-~~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~--ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~ 767 (995)
T 3ar4_A 691 YLQ-SYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAV--AKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLIS 767 (995)
T ss_dssp HHH-TTTCCEEEEECSGGGHHHHHHSTEEEEETTSCHH--HHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-HCCCEEEEEcCCchhHHHHHHCCeEEEeCCCCHH--HHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 994 5699999999999999999999999999 56666 889999999998887766 699999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHH
Q 001087 853 KNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIW 932 (1159)
Q Consensus 853 kni~~~~~~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~ 932 (1159)
+|+..+++.+++.++.. ..++.++|++|+|++++++|++++|++++ ++++|.++|+ .++.++++++.++.|
T Consensus 768 ~Ni~~~~~~~~~~~~g~---~~pl~~~qil~~nl~~d~~p~l~l~~~~~--~~~~m~~~P~----~~~~~l~~~~~~~~~ 838 (995)
T 3ar4_A 768 SNVGEVVCIFLTAALGL---PEALIPVQLLWVNLVTDGLPATALGFNPP--DLDIMDRPPR----SPKEPLISGWLFFRY 838 (995)
T ss_dssp HHHHHHHHHHHHHHTTC---CCSSCHHHHHHHHHTTTHHHHHHHTTCCC--CTTGGGSCCC----CTTCCSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC---cchHHHHHHHHHHHHHHHHHHHhhccCCC--ChhHHhCCCC----CCcccccCHHHHHHH
Confidence 99999999888887732 23578999999999999999999998776 5789999997 566789999999999
Q ss_pred HHHHHHHHHHHHHHHH-hcc--CCc--c--C---------CCCccc-----c---cccchhHHHHHHHHHHHHHHHHhhc
Q 001087 933 AFFSVYQSLVLYNCVT-TSS--ATG--Q--N---------SSGKIF-----G---IWDVSTMAFTCVVVTVNLRLLMMCN 988 (1159)
Q Consensus 933 ~~~~~~~s~vif~~~~-~~~--~~~--~--~---------~~g~~~-----~---~~~~~~~~~~~~v~~~~~~~~l~~~ 988 (1159)
++.|++++++.++.+. ++. ... . . .++... + .....|++|+++++...++.+ .++
T Consensus 839 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~-~~r 917 (995)
T 3ar4_A 839 MAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNAL-NSL 917 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHH-TTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHH-Hhh
Confidence 9999999988765433 221 100 0 0 000000 0 123578889998888877754 332
Q ss_pred c-----c--hhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 989 T-----I--TRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGVQ 1060 (1159)
Q Consensus 989 ~-----~--~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~~ 1060 (1159)
+ | ..+.+..++.++++.++++++..++| .++.++++. .++.+|+.++++++++++++.++|+++
T Consensus 918 ~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p--------~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 989 (995)
T 3ar4_A 918 SENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVD--------PLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIA 989 (995)
T ss_dssp CSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHST--------HHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccccchhccCCccCHHHHHHHHHHHHHHHHHHHHH--------HHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 1 12345555555555555544444443 234556666 789999999999999999999999998
Q ss_pred Hhh
Q 001087 1061 RWF 1063 (1159)
Q Consensus 1061 ~~~ 1063 (1159)
|.|
T Consensus 990 r~~ 992 (995)
T 3ar4_A 990 RNY 992 (995)
T ss_dssp HHS
T ss_pred hcC
Confidence 865
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-105 Score=1041.10 Aligned_cols=850 Identities=18% Similarity=0.201 Sum_probs=652.3
Q ss_pred hhhhHHHHHHHHHHhhcc--cc-------cccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhc---cceEEEeeCCe
Q 001087 13 RRVANCYFLMISILSTTP--MS-------PVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTIN---STPVEVLQGQR 80 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~--~s-------~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n---~~~~~V~r~g~ 80 (1159)
..+.++++++.++++++. +. ..+.+...++++++++++++.++++++|+.++.+.++ +.+++|+|||+
T Consensus 107 ~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~ 186 (1034)
T 3ixz_A 107 AGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGD 186 (1034)
T ss_pred hChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCE
Confidence 566677777777777653 11 1123445677888889999999999999998866554 57899999999
Q ss_pred EEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEec
Q 001087 81 WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCE 160 (1159)
Q Consensus 81 ~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e 160 (1159)
+++|+|++|+|||||.|++||.||||++|+++++. .||||+|||||.|+.|.+.+....
T Consensus 187 ~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~l----~VdES~LTGES~pv~K~~~~~~~~----------------- 245 (1034)
T 3ixz_A 187 KFQINADQLVVGDLVEMKGGDRVPADIRILQAQGR----KVDNSSLTGESEPQTRSPECTHES----------------- 245 (1034)
T ss_pred EEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCCc----eEEecccCCCCCCeeccCCCcccc-----------------
Confidence 99999999999999999999999999999998775 499999999999999987542100
Q ss_pred CCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccch---hhhhccCCCCCCcCHHHHHHHHHHHH
Q 001087 161 QPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILA 237 (1159)
Q Consensus 161 ~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~T---k~~~n~~~~~~k~s~l~~~~n~~~~~ 237 (1159)
+.......|.||.+.+|. ++|+|++||.+| |+.++....+.+++|+++.++++..+
T Consensus 246 ~~~~~n~~f~GT~v~~G~---------------------~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~ 304 (1034)
T 3ixz_A 246 PLETRNIAFFSTMCLEGT---------------------AQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDI 304 (1034)
T ss_pred ccccccceecceeEEeec---------------------ceEEEEeehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHH
Confidence 001122345555555554 999999999999 45555667778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHh
Q 001087 238 LFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQ 317 (1159)
Q Consensus 238 l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~ 317 (1159)
+..+.++++++.++++.+... .+...++.++.+++.+||++||++++++.+++
T Consensus 305 l~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~ 357 (1034)
T 3ixz_A 305 IAGLAILFGATFFIVAMCIGY---------------------------TFLRAMVFFMAIVVAYVPEGLLATVTVCLSLT 357 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhcc---------------------------hHHHHHHHHHHHHHheeccccHHHHHHHHHHH
Confidence 988888888776665433211 12337778899999999999999999999999
Q ss_pred hhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCC
Q 001087 318 STQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMK 397 (1159)
Q Consensus 318 ~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~ 397 (1159)
++++ ++++++||+++.+|+||++++||||||||||+|+|+|.++++++..|.....+...
T Consensus 358 -~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~--------- 417 (1034)
T 3ixz_A 358 -AKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQS--------- 417 (1034)
T ss_pred -HHHH----------hhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCccccc---------
Confidence 9988 78999999999999999999999999999999999999999988776532211000
Q ss_pred CcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCC--ceEEecCChhHHHHHHHHH
Q 001087 398 IPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPE--RITYQAASPDEAALVTAAK 475 (1159)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~--~~~y~~~spdE~Alv~~a~ 475 (1159)
+.. ..........+++++++||++.....++.. .-.+..++|+|.|+++++.
T Consensus 418 --------------~~~------------~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~ 471 (1034)
T 3ixz_A 418 --------------GQT------------FDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSE 471 (1034)
T ss_pred --------------ccc------------cCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHH
Confidence 000 011234567889999999998775433211 1123468999999999999
Q ss_pred HcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCC---CcEEEEEecchhHHHHHhhc--
Q 001087 476 NFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD---GRLVLYCKGADSVIYERLAN-- 550 (1159)
Q Consensus 476 ~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~---g~~~l~~KGA~~~i~~~~~~-- 550 (1159)
..|..... .+..|+.+..+||+|+||||+++++.++ +++++|+||||+.|+++|+.
T Consensus 472 ~~~~~~~~-------------------~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~ 532 (1034)
T 3ixz_A 472 LTLGNAMG-------------------YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSIL 532 (1034)
T ss_pred HhCCChHH-------------------HHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhh
Confidence 87643210 2356888999999999999999887643 78999999999999999974
Q ss_pred -------CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEE
Q 001087 551 -------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGC 623 (1159)
Q Consensus 551 -------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~ 623 (1159)
.+++.++.+.+++++|+.+|+|||++|+|.++++++.++..... +..+.+|+||+|+|+
T Consensus 533 ~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~--------------~~~~~~e~~l~~lGl 598 (1034)
T 3ixz_A 533 IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDV--------------EAMNFPTSGLSFAGL 598 (1034)
T ss_pred cCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccch--------------hhhhccccCcEEEEE
Confidence 23345677889999999999999999999999877655432110 112456899999999
Q ss_pred eeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHH
Q 001087 624 TAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMRE 703 (1159)
Q Consensus 624 ~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 703 (1159)
++++||+|++++++|+.|+++||+|||+|||+.+||.+||++|||..++...+ .
T Consensus 599 v~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i--------------------------~ 652 (1034)
T 3ixz_A 599 VSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETV--------------------------E 652 (1034)
T ss_pred EeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHH--------------------------H
Confidence 99999999999999999999999999999999999999999999986542100 0
Q ss_pred HHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcE
Q 001087 704 EVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKI 783 (1159)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~ 783 (1159)
...++...... ..........+++|..+..+.++++. ++...++.++|||++|+||.++|+.+ |+.|++
T Consensus 653 ~~~~~~~~~~~------~~~~~~~~~~~~~g~~l~~~~~~~l~----~~~~~~~~~v~ar~~P~~K~~iv~~l-q~~g~~ 721 (1034)
T 3ixz_A 653 DIAARLRVPVD------QVNRKDARACVINGMQLKDMDPSELV----EALRTHPEMVFARTSPQQKLVIVESC-QRLGAI 721 (1034)
T ss_pred HHHHhhCccch------hccccccceeEEecHhhhhCCHHHHH----HHHHhCCceEEEecCHHHHHHHHHHH-HHcCCE
Confidence 00000000000 11123445789999999877665544 44455677899999999999999999 678999
Q ss_pred EEEecCCccCHHHHHhcccceeec--Cccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 001087 784 TLSIGDGANDVSMIQAAHIGVGIS--GQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLT 860 (1159)
Q Consensus 784 vl~iGDG~NDv~mL~~AdVGIgis--g~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~ 860 (1159)
|+|+|||+||++||++|||||+|. |+|. |+++||+++.++++...+ ++.|||++|+|+++++.|.+++|+..+++
T Consensus 722 V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~--aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~ 799 (1034)
T 3ixz_A 722 VAVTGDGVNDSPALKKADIGVAMGIAGSDA--AKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTP 799 (1034)
T ss_pred EEEECCcHHhHHHHHHCCeeEEeCCccCHH--HHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999884 5565 999999999999999988 68899999999999999999999999999
Q ss_pred HHHHHHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccC-cccccCHHHHHH-HHHHHHH
Q 001087 861 QFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGI-KNVFFTWRVVAI-WAFFSVY 938 (1159)
Q Consensus 861 ~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~-~~~~~~~~~f~~-~~~~~~~ 938 (1159)
.+++.++. ...++.++|++|+|++++.+|+++++.+++ ++++|.++|+ .+ ..++++.+.++. ++..|++
T Consensus 800 ~~~~~~~~---~~~pl~~~qiL~inl~~d~~palal~~e~~--~~~~m~~~Pr----~~~~~~l~~~~~~~~~~~~~g~~ 870 (1034)
T 3ixz_A 800 YLIYITVS---VPLPLGCITILFIELCTDIFPSVSLAYEKA--ESDIMHLRPR----NPKRDRLVNEPLAAYSYFQIGAI 870 (1034)
T ss_pred HHHHHHHh---hhhhHHHHHHHHHHHHHHHHHHHHhhcCCC--ChhhhhCCCC----CCccccccCHHHHHHHHHHHHHH
Confidence 99998873 223489999999999999999999997554 7889999997 44 467888887655 3445777
Q ss_pred HHHHHHHHHH-hccCCccCC-----------C----------Ccc-------cccccchhHHHHHHHHHHHHHHHHhhcc
Q 001087 939 QSLVLYNCVT-TSSATGQNS-----------S----------GKI-------FGIWDVSTMAFTCVVVTVNLRLLMMCNT 989 (1159)
Q Consensus 939 ~s~vif~~~~-~~~~~~~~~-----------~----------g~~-------~~~~~~~~~~~~~~v~~~~~~~~l~~~~ 989 (1159)
++++.|+.++ .+...++.. + |.. .......|+.|+++++...++.+ .+++
T Consensus 871 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~-~~r~ 949 (1034)
T 3ixz_A 871 QSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVL-IRKT 949 (1034)
T ss_pred HHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHH-hhcc
Confidence 7776655544 221111100 0 000 00112568888888887777744 3443
Q ss_pred -----ch--hhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 990 -----IT--RFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGVQR 1061 (1159)
Q Consensus 990 -----~~--~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~~~ 1061 (1159)
|. .+.+..+|+++++.+++++++.++|+ ++.+|++. .++..|+.+++++++.++.+++.|++.|
T Consensus 950 ~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~--------~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r 1021 (1034)
T 3ixz_A 950 RRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPG--------MPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVR 1021 (1034)
T ss_pred CCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhh--------HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 25677888888888888777777643 45667777 8899999999999999999999999998
Q ss_pred hhCCCh
Q 001087 1062 WFSPYD 1067 (1159)
Q Consensus 1062 ~~~p~~ 1067 (1159)
++-+..
T Consensus 1022 ~~~~~~ 1027 (1034)
T 3ixz_A 1022 CCPGSW 1027 (1034)
T ss_pred hCCCCh
Confidence 764443
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-106 Score=1042.85 Aligned_cols=846 Identities=19% Similarity=0.224 Sum_probs=646.9
Q ss_pred hhhhHHHHHHHHHHhhcc--cc----c---ccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHh---hccceEEEeeCCe
Q 001087 13 RRVANCYFLMISILSTTP--MS----P---VNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMT---INSTPVEVLQGQR 80 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~--~s----~---~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~---~n~~~~~V~r~g~ 80 (1159)
..+.++++++.++++++. +. . ...+...++++++++++++.++++++|..++.+. +.+.+++|+|||+
T Consensus 102 ~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~ 181 (1028)
T 2zxe_A 102 FGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGE 181 (1028)
T ss_dssp TSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTE
T ss_pred HhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCE
Confidence 778888888888888765 21 0 1123345567888889999999999888777554 4578999999999
Q ss_pred EEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEec
Q 001087 81 WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCE 160 (1159)
Q Consensus 81 ~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e 160 (1159)
+++|+|++|+|||||.|++||.||||++|+++++ |+||||+|||||+|+.|.+.+..
T Consensus 182 ~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LTGES~pv~K~~~~~~------------------- 238 (1028)
T 2zxe_A 182 KSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLTGESEPQTRSPEFSS------------------- 238 (1028)
T ss_dssp EEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHHSCCSCEECCSSCCC-------------------
T ss_pred EEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccCCCCcceecccCCCC-------------------
Confidence 9999999999999999999999999999999763 78999999999999999875421
Q ss_pred CCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhh---hhccCCCCCCcCHHHHHHHHHHHH
Q 001087 161 QPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILA 237 (1159)
Q Consensus 161 ~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~---~~n~~~~~~k~s~l~~~~n~~~~~ 237 (1159)
..|++.+|++++||.+.+ |+++|+|++||++|++ +++...++.++||+++.+|+++.+
T Consensus 239 ------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~ 299 (1028)
T 2zxe_A 239 ------------------ENPLETRNIAFFSTNCVE-GTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHI 299 (1028)
T ss_dssp ------------------SSTTTCSSEECTTCEEEE-EEEEEEEEECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHH
T ss_pred ------------------CCcccccceEEeCceEEc-ceEEEEEEEeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHH
Confidence 115567788888888885 6799999999999965 555667788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHh
Q 001087 238 LFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQ 317 (1159)
Q Consensus 238 l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~ 317 (1159)
++.+.++++++.+++.. +.. ..| ...+..++.+++.+||++||++++++++++
T Consensus 300 l~~~~l~~~~~~~~~~~-~~~-~~~-------------------------~~~~~~~i~llv~~iP~~Lp~~vti~l~~~ 352 (1028)
T 2zxe_A 300 ITGVAVFLGVSFFILSL-ILG-YSW-------------------------LEAVIFLIGIIVANVPEGLLATVTVCLTLT 352 (1028)
T ss_dssp HHHHHHHHHHHHHHHHH-HTT-CCH-------------------------HHHHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-Hcc-CcH-------------------------HHHHHHHHHHHHHHcCchHHHHHHHHHHHH
Confidence 99999888887766533 221 112 125566777888899999999999999999
Q ss_pred hhhhhccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCC
Q 001087 318 STQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMK 397 (1159)
Q Consensus 318 ~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~ 397 (1159)
+.++ ++++++||+++.+|+||++++||||||||||+|+|+|.++++++..|.....+..
T Consensus 353 -~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~---------- 411 (1028)
T 2zxe_A 353 -AKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQ---------- 411 (1028)
T ss_dssp -HHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTC----------
T ss_pred -HHHH----------hhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCc----------
Confidence 8888 7899999999999999999999999999999999999999999887743211000
Q ss_pred CcccccchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCC--ceEEecCChhHHHHHHHHH
Q 001087 398 IPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPE--RITYQAASPDEAALVTAAK 475 (1159)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~--~~~y~~~spdE~Alv~~a~ 475 (1159)
.+.. .+..+...++++.++++||++..+..++.. .-.+..+||+|.||+++|+
T Consensus 412 -------------~~~~------------~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~ 466 (1028)
T 2zxe_A 412 -------------SGAA------------FDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIE 466 (1028)
T ss_dssp -------------CSCC------------CCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHH
T ss_pred -------------cccc------------cccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHH
Confidence 0000 011223456888999999999876432111 1112468999999999998
Q ss_pred HcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcC---CCcEEEEEecchhHHHHHhhc--
Q 001087 476 NFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYA---DGRLVLYCKGADSVIYERLAN-- 550 (1159)
Q Consensus 476 ~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~g~~~l~~KGA~~~i~~~~~~-- 550 (1159)
+.|.... . .+..|+++..+||+|+|||||++++.+ +|++++|+||||+.|+++|..
T Consensus 467 ~~~~~~~-----------~--------~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~ 527 (1028)
T 2zxe_A 467 LCCGSVQ-----------G--------MRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTIL 527 (1028)
T ss_dssp HHHSCHH-----------H--------HHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEEC
T ss_pred HhCCCHH-----------H--------HHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhh
Confidence 8642110 0 124578889999999999999999974 578899999999999999974
Q ss_pred -------CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEE
Q 001087 551 -------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGC 623 (1159)
Q Consensus 551 -------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~ 623 (1159)
-+++.++.+.+++++|+++|+|||++|||+++++++.++. .. +++ ..+.+|+|++|+|+
T Consensus 528 ~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~--------~~-~~~-----~~~~~e~~l~~lG~ 593 (1028)
T 2zxe_A 528 LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY--------PF-DAD-----EPNFPTTDLCFVGL 593 (1028)
T ss_dssp BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC--------CC-CTT-----TTCSCCSSEEEEEE
T ss_pred cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCcccccccc--------cc-chh-----hhhhhhcCeEEEee
Confidence 1234567788999999999999999999999876543210 00 110 11345899999999
Q ss_pred eeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHH
Q 001087 624 TAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMRE 703 (1159)
Q Consensus 624 ~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 703 (1159)
++++||+|++++++|+.|+++||++||+|||+.+||.+||++|||..++...+ .
T Consensus 594 i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i---------~----------------- 647 (1028)
T 2zxe_A 594 MAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETI---------E----------------- 647 (1028)
T ss_dssp EEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCH---------H-----------------
T ss_pred eccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhH---------H-----------------
Confidence 99999999999999999999999999999999999999999999986543210 0
Q ss_pred HHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcE
Q 001087 704 EVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKI 783 (1159)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~ 783 (1159)
....+.. . ... .........++++|.++..+.++++. ++...|+.++|||++|+||..+|+.+ |+.|++
T Consensus 648 ~~~~~~~--~-~~~---~~~~~~~~~~vi~G~~l~~~~~~~l~----~~~~~~~~~v~ar~~P~~K~~iV~~l-q~~g~~ 716 (1028)
T 2zxe_A 648 DIAARLN--I-PIG---QVNPRDAKACVVHGSDLKDLSTEVLD----DILHYHTEIVFARTSPQQKLIIVEGC-QRQGAI 716 (1028)
T ss_dssp HHHHHTT--C-CGG---GSCGGGCCEEEEEHHHHTTCCHHHHH----HHHHHCSEEEEESCCHHHHHHHHHHH-HHTTCC
T ss_pred HHHhhcC--c-chh---hccccccceEEEEcHHhhhCCHHHHH----HHHhhCCcEEEEEcCHHHHHHHHHHH-HhCCCE
Confidence 0000000 0 000 11112334689999999877655444 44556777899999999999999999 567899
Q ss_pred EEEecCCccCHHHHHhcccceeec--Cccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 001087 784 TLSIGDGANDVSMIQAAHIGVGIS--GQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLT 860 (1159)
Q Consensus 784 vl~iGDG~NDv~mL~~AdVGIgis--g~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~ 860 (1159)
|+|+|||+||+|||++|||||++. |+|. |+++||+++.++++.... ++.|||++|+|+++++.|.+++|+..+++
T Consensus 717 V~~iGDG~ND~paLk~AdvGIAmg~~gtd~--ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~ 794 (1028)
T 2zxe_A 717 VAVTGDGVNDSPALKKADIGVAMGISGSDV--SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITP 794 (1028)
T ss_dssp EEEEECSGGGHHHHHHSSEEEEESSSCCHH--HHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred EEEEcCCcchHHHHHhCCceEEeCCccCHH--HHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999884 7777 889999999998887665 69999999999999999999999999998
Q ss_pred HHHHHHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCc-ccccCHHHHHH-HHHHHHH
Q 001087 861 QFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIK-NVFFTWRVVAI-WAFFSVY 938 (1159)
Q Consensus 861 ~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~-~~~~~~~~f~~-~~~~~~~ 938 (1159)
.+++.++.. ..++++++++|+|++++.+|+++++. |++ ++++|.++|+ .++ +++++++.++. |+..|++
T Consensus 795 ~~~~~~~~~---~~~l~~~qil~inl~~d~~pa~al~~-e~~-~~~~m~~~Pr----~~~~~~l~~~~~~~~~~~~~g~~ 865 (1028)
T 2zxe_A 795 FLVFIIGNV---PLPLGTVTILCIDLGTDMVPAISLAY-EQA-ESDIMKRQPR----NPKTDKLVNERLISMAYGQIGMI 865 (1028)
T ss_dssp HHHHHHHCC---CCSSCHHHHHHHHTTTTHHHHHHGGG-CCC-SSCGGGSCCC----CTTTCCSSCHHHHHHHTTTHHHH
T ss_pred HHHHHHHcc---cchhHHHHHHHHHHHHHHHHHHHhcc-Ccc-chhhhccCCC----CcccccccCHHHHHHHHHHHHHH
Confidence 888877732 23478999999999999999999985 443 6789999996 333 48999998776 5678999
Q ss_pred HHHHHHHHHH-hccCCcc------------CC---------CCccc-------ccccchhHHHHHHHHHHHHHHHHhhcc
Q 001087 939 QSLVLYNCVT-TSSATGQ------------NS---------SGKIF-------GIWDVSTMAFTCVVVTVNLRLLMMCNT 989 (1159)
Q Consensus 939 ~s~vif~~~~-~~~~~~~------------~~---------~g~~~-------~~~~~~~~~~~~~v~~~~~~~~l~~~~ 989 (1159)
++++.|+.++ .+....+ .. .|... ......|++|+++++.+.+.... +++
T Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~-~r~ 944 (1028)
T 2zxe_A 866 QALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLII-CKT 944 (1028)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHH-Hcc
Confidence 9988776554 2211110 00 01100 01146789999999988887543 332
Q ss_pred --chh----hHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeeeec-cchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001087 990 --ITR----FHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STFYFYFTLILVPVLALLGDFIFQGVQRW 1062 (1159)
Q Consensus 990 --~~~----~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~~~~ 1062 (1159)
.+. +.+..++.++++.+++.++..++|+ ++.+|++. .++..|+.++.+.++.++.+.+.|++.|.
T Consensus 945 ~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~--------~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~ 1016 (1028)
T 2zxe_A 945 RRNSIFQQGMKNKILIFGLFEETALAAFLSYCPG--------TDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRR 1016 (1028)
T ss_dssp SSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTT--------HHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhh--------HHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 222 2355666677766666666555542 34556666 78999999999999999999999988776
Q ss_pred h
Q 001087 1063 F 1063 (1159)
Q Consensus 1063 ~ 1063 (1159)
+
T Consensus 1017 ~ 1017 (1028)
T 2zxe_A 1017 S 1017 (1028)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-95 Score=918.13 Aligned_cols=745 Identities=15% Similarity=0.154 Sum_probs=546.8
Q ss_pred hhhhHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHhhc---cceEEEeeCCeEEEeeccCc
Q 001087 13 RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTIN---STPVEVLQGQRWVSIPWRKL 89 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~~s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~~n---~~~~~V~r~g~~~~i~~~~l 89 (1159)
..+.++.+++.++++++. ..|... +.++++++++++.+++++++..++.+.++ +.+++|+|||++++|++++|
T Consensus 121 ~~~~~~ll~~aai~s~~~---g~~~~~-~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eL 196 (920)
T 1mhs_A 121 VGPIQFVMEGAAVLAAGL---EDWVDF-GVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEV 196 (920)
T ss_dssp HHHHHHHHHHHHHHCTTC---SCSSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTS
T ss_pred HHHHHHHHHHHHHHHHHH---HhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHc
Confidence 444445555555555442 234443 44566777888889999999998876655 47899999999999999999
Q ss_pred ccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCccee
Q 001087 90 QVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTF 169 (1159)
Q Consensus 90 ~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f 169 (1159)
+|||||.|++||.||||++|+++++ .++||||+|||||.|+.|.+++ ..|
T Consensus 197 v~GDiV~l~~Gd~VPaDg~ll~g~~---~l~VDES~LTGES~PV~K~~gd---------------------------~v~ 246 (920)
T 1mhs_A 197 VPGDILQVEEGTIIPADGRIVTDDA---FLQVDQSALTGESLAVDKHKGD---------------------------QVF 246 (920)
T ss_dssp CTTSEEEECTTCBCSSEEEEEEESS---CCEEBCTTTSSCCCCEECCSSC---------------------------EEC
T ss_pred CCCCEEEeCCCCccccceEEEecCc---eeeeeccccCCCCcceEecCCC---------------------------eee
Confidence 9999999999999999999999874 1369999999999999998754 347
Q ss_pred EEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhcc---CCCCCCcCHHHHHHHHHHHHHHHHHHHHH
Q 001087 170 TGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNS---MNIPSKRSTLERKLDKLILALFATLTVMC 246 (1159)
Q Consensus 170 ~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~---~~~~~k~s~l~~~~n~~~~~l~~~~~~l~ 246 (1159)
+||++.+|. +.++|++||.+|++++.. ..++.+++++++.++++..+++++.++++
T Consensus 247 sGT~v~~G~---------------------~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~ 305 (920)
T 1mhs_A 247 ASSAVKRGE---------------------AFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTL 305 (920)
T ss_dssp SCBCCSCCC---------------------EEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceEecce---------------------EEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 777777666 999999999999876643 45667899999999999988887777666
Q ss_pred HHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhcccc
Q 001087 247 LICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDL 326 (1159)
Q Consensus 247 ~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~ 326 (1159)
++.++.+. |. .. .....+..++++++.+|||+||++++++.+++ +.++
T Consensus 306 ~i~~~~~~--------~~-~~------------------~~~~~l~~av~llV~aiP~aLp~~vti~la~g-~~~m---- 353 (920)
T 1mhs_A 306 LIVWVSSF--------YR-SN------------------PIVQILEFTLAITIIGVPVGLPAVVTTTMAVG-AAYL---- 353 (920)
T ss_dssp HHHHHTTT--------TT-TC------------------CHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH-HHHH----
T ss_pred HHHHHHHH--------hc-CC------------------cHHHHHHHHHHHHHHhCchhHHHHHHHHHHHH-HHHH----
Confidence 55433211 10 00 01236677889999999999999999999999 8888
Q ss_pred ccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchh
Q 001087 327 HMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVK 406 (1159)
Q Consensus 327 ~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (1159)
+++++++|+++.+|+||++++||||||||||+|+|++.+++..+. +
T Consensus 354 ------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~--------------------------- 399 (920)
T 1mhs_A 354 ------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-V--------------------------- 399 (920)
T ss_dssp ------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-C---------------------------
T ss_pred ------HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-C---------------------------
Confidence 788999999999999999999999999999999999987643210 0
Q ss_pred hhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecC
Q 001087 407 AVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTP 486 (1159)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~ 486 (1159)
.+ .+++.+.++|+... . ..+||+|.|+++++++.+..-
T Consensus 400 ---------------------~~-----~~ll~~a~l~~~~~----~-------~~~~P~e~Al~~~~~~~~~~~----- 437 (920)
T 1mhs_A 400 ---------------------DP-----EDLMLTACLAASRK----K-------KGIDAIDKAFLKSLKYYPRAK----- 437 (920)
T ss_dssp ---------------------CC-----THHHHHHHHSCCCS----S-------CSCCSHHHHHHHHHHHSSSCC-----
T ss_pred ---------------------CH-----HHHHHHHHHhcCCc----c-------cCCChHHHHHHHHHHhcccch-----
Confidence 00 13456677776531 1 014999999999998876310
Q ss_pred ceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcC---ChhhHHHHHHHH
Q 001087 487 TMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANG---NEDLKKVTREHL 563 (1159)
Q Consensus 487 ~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~---~~~~~~~~~~~l 563 (1159)
. ....|++++.+||+|.||||+++++.++|+.++|+||||+.|+++|... .++..+.+.+++
T Consensus 438 --------~-------~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~ 502 (920)
T 1mhs_A 438 --------S-------VLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKV 502 (920)
T ss_dssp --------G-------GGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHH
T ss_pred --------h-------hccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHH
Confidence 0 1245788899999999999999999888888899999999999999752 334566788899
Q ss_pred HHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHH
Q 001087 564 EQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLAR 643 (1159)
Q Consensus 564 ~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~ 643 (1159)
++|+.+|+|||++|+|.. |++++|+|+++++||+|++++++|+.|++
T Consensus 503 ~~~a~~G~RvL~vA~~~~---------------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~ 549 (920)
T 1mhs_A 503 AEFATRGFRSLGVARKRG---------------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKT 549 (920)
T ss_dssp HHHHTSSCCCCEECCCSS---------------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHH
T ss_pred HHHHhCCCEEEEEEEecc---------------------------------ccccEEEEEEEEeccccccHHHHHHHHhh
Confidence 999999999999998731 57899999999999999999999999999
Q ss_pred cCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 001087 644 AGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSI 723 (1159)
Q Consensus 644 aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (1159)
+||++||+|||++.||.+||++|||..... +.+.
T Consensus 550 aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~-----~~~~----------------------------------------- 583 (920)
T 1mhs_A 550 LGLSIKMLTGDAVGIARETSRQLGLGTNIY-----NAER----------------------------------------- 583 (920)
T ss_dssp HTCEEEEEESSCHHHHHHHHHHHTSSCSCC-----CSSS-----------------------------------------
T ss_pred cCceEEEEcCCCHHHHHHHHHHcCCCcccc-----Cccc-----------------------------------------
Confidence 999999999999999999999999964210 0000
Q ss_pred CCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccc
Q 001087 724 SGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIG 803 (1159)
Q Consensus 724 ~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVG 803 (1159)
++++|. ..+.++++.+ +. .+..||||++|+||.++|+.+ |+.|++|+|+|||+||+|||++||||
T Consensus 584 ------~~~~g~--~~~~~~el~~----~~--~~~~V~arv~P~~K~~iV~~L-q~~g~~Vam~GDGvNDapaLk~AdvG 648 (920)
T 1mhs_A 584 ------LGLGGG--GDMPGSEVYD----FV--EAADGFAEVFPQHKYNVVEIL-QQRGYLVAMTGDGVNDAPSLKKADTG 648 (920)
T ss_dssp ------SSSCBC--CCGGGGGGGT----TT--TTTSCEESCCSTHHHHHHHHH-HTTTCCCEECCCCGGGHHHHHHSSEE
T ss_pred ------eeecCc--ccCCHHHHHH----HH--hhCeEEEEeCHHHHHHHHHHH-HhCCCeEEEEcCCcccHHHHHhCCcC
Confidence 012222 0111112111 11 134599999999999999999 56699999999999999999999999
Q ss_pred eee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHH
Q 001087 804 VGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQ 881 (1159)
Q Consensus 804 Igi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~~~~~~l 881 (1159)
|++ +|++. |+++||+++.++++.... ++.|||++|+|+++++.|.++.|+.+.+..+++..+.++ + +++.++
T Consensus 649 IAmg~gtd~--ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~---~-l~~~~i 722 (920)
T 1mhs_A 649 IAVEGSSDA--ARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNR---S-LNIELV 722 (920)
T ss_dssp EEETTSCHH--HHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSC---C-CCHHHH
T ss_pred cccccccHH--HHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---c-CCHHHH
Confidence 999 45665 889999999999987766 799999999999999999999999875444444444444 3 567778
Q ss_pred HHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCccCCCCcc
Q 001087 882 SLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSGKI 961 (1159)
Q Consensus 882 ~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~~~~~~~~~~~g~~ 961 (1159)
+|.|++.+. |++++++++.+. .+.|+-... ..++ +..++.|++.++..++.+.+++... ..+|..
T Consensus 723 l~~~l~~d~-~~lal~~e~~~~-----~~~P~~~~~---~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~ 787 (920)
T 1mhs_A 723 VFIAIFADV-ATLAIAYDNAPY-----SQTPVKWNL---PKLW-----GMSVLLGVVLAVGTWITVTTMYAQG-ENGGIV 787 (920)
T ss_dssp HHHHHHHTT-HHHHCCCCCSGG-----GGSCCCCCS---SSCS-----SCHHHHHHHHHHHHHHHHHHHTTTT-TTCCSS
T ss_pred HHHHHHHHH-HhhhhcccCccc-----ccCCCCchH---HHHH-----HHHHHHHHHHHHHHHHHHHHHHHhc-cccccc
Confidence 888887775 999998765532 245542211 1122 1223446666555443333111110 011111
Q ss_pred cccccchhHHHHHHHHHHHHHHHHhhcc----chhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeeeec-cch
Q 001087 962 FGIWDVSTMAFTCVVVTVNLRLLMMCNT----ITRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STF 1036 (1159)
Q Consensus 962 ~~~~~~~~~~~~~~v~~~~~~~~l~~~~----~~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1036 (1159)
.+.....|++|+++++...+.++ .+++ |....+..+++++++..++...+.+.+ +|.+. .++
T Consensus 788 ~~~~~~~T~~f~~lv~~~~~~~~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~f~~~~l~~ 854 (920)
T 1mhs_A 788 QNFGNMDEVLFLQISLTENWLIF-ITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG------------WFEHSDTSI 854 (920)
T ss_dssp SSSSSHHHHHHHHHHHHHHHHTT-SSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSS------------STTSCSHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHH-HhccchhhhcCchHHHHHHHHHHHHHHHHHHHHhh------------hhccCCCCH
Confidence 12235789999999999888754 3333 221234444555444444433333221 33344 678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001087 1037 YFYFTLILVPVLALLGDFIFQGVQRWF 1063 (1159)
Q Consensus 1037 ~~w~~~l~~~~~~l~~~~~~k~~~~~~ 1063 (1159)
..|+.++++.++.++...+.|++.+..
T Consensus 855 ~~~~~~~~~~~~~~~~~e~~k~~~~~~ 881 (920)
T 1mhs_A 855 VAVVRIWIFSFGIFCIMGGVYYILQDS 881 (920)
T ss_dssp HTHHHHHHHTTHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 889999988888888888888655543
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-93 Score=903.87 Aligned_cols=755 Identities=17% Similarity=0.174 Sum_probs=530.3
Q ss_pred hhhhHHHHHHHHHHhhccc----ccccccchhhhHHHHHHHHHHHHHHHHHHHhhhhHh---hccceEEEeeCCeEEEee
Q 001087 13 RRVANCYFLMISILSTTPM----SPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMT---INSTPVEVLQGQRWVSIP 85 (1159)
Q Consensus 13 ~~~~n~yfl~i~il~~i~~----s~~~~~~~~~pl~~vl~vs~ik~~~ed~~r~~~d~~---~n~~~~~V~r~g~~~~i~ 85 (1159)
..+.++.+++.++++++.- .+..|+..+ .++++++++++.+.++++|..++.+. +++.+++|+|||++++|+
T Consensus 66 ~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~-~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~ 144 (885)
T 3b8c_A 66 WNPLSWVMEMAAIMAIALANGDGRPPDWQDFV-GIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQE 144 (885)
T ss_dssp CGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHH-HHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEE
Confidence 4555556666666766541 122455544 45556666777788888887776554 356789999999999999
Q ss_pred ccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCC
Q 001087 86 WRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNS 165 (1159)
Q Consensus 86 ~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~ 165 (1159)
+++|+|||||.|++||.||||++|+++++. +||||+|||||.|+.|.+++
T Consensus 145 ~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~l----~VdES~LTGES~Pv~K~~g~-------------------------- 194 (885)
T 3b8c_A 145 AAILVPGDIVSIKLGDIIPADARLLEGDPL----KVDQSALTGESLPVTKHPGQ-------------------------- 194 (885)
T ss_dssp TTTTCTTSBCCCCSSCCCSSCCCCCCSSCB----CCCCCSTTCCSSCCCBSSCC--------------------------
T ss_pred HHHCCCCCEEEECCCCEEeeceEEEEcCcc----cccccccCCCCcceEecCCC--------------------------
Confidence 999999999999999999999999997653 49999999999999998754
Q ss_pred cceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhccC--CCCCCcCHHHHHHHHHHHHHHH-HH
Q 001087 166 LYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSM--NIPSKRSTLERKLDKLILALFA-TL 242 (1159)
Q Consensus 166 l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n~~--~~~~k~s~l~~~~n~~~~~l~~-~~ 242 (1159)
..|+||.+.+|. ++++|++||.+|++++... +...+++++|+.++++..+++. +.
T Consensus 195 -~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~ 252 (885)
T 3b8c_A 195 -EVFSGSTCKQGE---------------------IEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIA 252 (885)
T ss_dssp -CCCSCCCCCSCC---------------------CCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHH
T ss_pred -ccccCeEEeeeE---------------------EEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHHHHHHHHHHHH
Confidence 247777766665 8999999999998766432 2256789999999999876433 22
Q ss_pred HHHHHHHHHHHhhhhccccccccccCCCCCccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhh
Q 001087 243 TVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYI 322 (1159)
Q Consensus 243 ~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i 322 (1159)
+.++++.++.+.+ ....|. ..+.+++++++.+||++||++++++..++ +.++
T Consensus 253 ~~~~~~~~~~~~~--~~~~~~-------------------------~~~~~~v~llv~aiP~aLp~~vti~la~g-~~r~ 304 (885)
T 3b8c_A 253 IGMVIEIIVMYPI--QRRKYR-------------------------DGIDNLLVLLIGGIPIAMPTVLSVTMAIG-SHRL 304 (885)
T ss_dssp HHHHHHSTTTTTT--TCSCST-------------------------THHHHHHHHTTTTCCSSTTTHHHHTTTHH-HHHH
T ss_pred HHHHHHHHHHHHH--ccCcHH-------------------------HHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHH
Confidence 2233222111111 100110 16778899999999999999999999999 8888
Q ss_pred ccccccccccCCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccc
Q 001087 323 NKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVE 402 (1159)
Q Consensus 323 ~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 402 (1159)
+++++++|+++.+|+||++++||||||||||+|+|++.++.+. .++.
T Consensus 305 ----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~--------------------- 351 (885)
T 3b8c_A 305 ----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCK--------------------- 351 (885)
T ss_dssp ----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCS---------------------
T ss_pred ----------HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccCC---------------------
Confidence 8999999999999999999999999999999999998643210 0000
Q ss_pred cchhhhccCCCCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEE
Q 001087 403 RSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFY 482 (1159)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~ 482 (1159)
+ ....+++...++|+... ++||.|.|+++++.+..
T Consensus 352 ---------~-------------------~~~~~ll~~aa~~~~~~-------------~~~p~~~Al~~~~~~~~---- 386 (885)
T 3b8c_A 352 ---------G-------------------VEKDQVLLFAAMASRVE-------------NQDAIDAAMVGMLADPK---- 386 (885)
T ss_dssp ---------S-------------------TTHHHHHHHHHHHCCSS-------------SCCSHHHHHHHTTCCTT----
T ss_pred ---------C-------------------CCHHHHHHHHHHHhCCC-------------CCCchHHHHHHHhhchh----
Confidence 0 01235677778887531 37999999998864310
Q ss_pred eecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHH
Q 001087 483 RRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREH 562 (1159)
Q Consensus 483 ~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~ 562 (1159)
+ .+..|+.++.+||+|.||||+++++.++|+.++|+||||+.|+++|.... +.++.+.++
T Consensus 387 ----------~---------~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~-~~~~~~~~~ 446 (885)
T 3b8c_A 387 ----------E---------ARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASN-DLSKKVLSI 446 (885)
T ss_dssp ----------C---------CCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCS-TTTTTHHHH
T ss_pred ----------h---------HhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCch-hhHHHHHHH
Confidence 0 12346678889999999999999988788888999999999999997432 345567788
Q ss_pred HHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHH
Q 001087 563 LEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLA 642 (1159)
Q Consensus 563 l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~ 642 (1159)
+++|+.+|+|||++|+|++++++. +..|+|++|+|+++++||+|++++++|+.|+
T Consensus 447 ~~~~a~~G~rvl~vA~~~~~~~~~-------------------------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~ 501 (885)
T 3b8c_A 447 IDKYAERGLRSLAVARQVVPEKTK-------------------------ESPGAPWEFVGLLPLFDPPRHDSAETIRRAL 501 (885)
T ss_dssp HHHHTTTTCEEEEECCBCCCSSSS-------------------------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHH
T ss_pred HHHHHhCCCeEEEEEEeccccccc-------------------------cccccCcEEEEEEEeecccchhHHHHHHHHH
Confidence 999999999999999998875321 3468899999999999999999999999999
Q ss_pred HcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 001087 643 RAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHS 722 (1159)
Q Consensus 643 ~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (1159)
++||++||+|||++.||.+||+++||..+... ..
T Consensus 502 ~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~-----~~----------------------------------------- 535 (885)
T 3b8c_A 502 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-----SS----------------------------------------- 535 (885)
T ss_dssp HTTCCCEEEESSCHHHHTHHHHTTTCTTCCST-----TS-----------------------------------------
T ss_pred HcCCcEEEEcCCChHHHHHHHHHhCCccccCC-----cc-----------------------------------------
Confidence 99999999999999999999999999642100 00
Q ss_pred cCCCceEEEEcccchhH-hcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcc
Q 001087 723 ISGEKLALIIDGKCLMY-ALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAH 801 (1159)
Q Consensus 723 ~~~~~~~lvi~G~~l~~-~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~Ad 801 (1159)
+++|.+++. +.+.++.+... +..||||++|+||.++|+.+ |+.|++|+|+|||+||+|||++||
T Consensus 536 --------~l~g~~~~~~~~~~~l~~~~~------~~~v~arv~P~~K~~iV~~l-q~~g~~Vam~GDGvNDapaLk~Ad 600 (885)
T 3b8c_A 536 --------ALLGTHKDANLASIPVEELIE------KADGFAGVFPEHKYEIVKKL-QERKHIVGMTGDGVNDAPALKKAD 600 (885)
T ss_dssp --------SCCBGGGGTTSCCSCHHHHHH------TSCCEECCCHHHHHHHHHHH-HHTTCCCCBCCCSSTTHHHHHHSS
T ss_pred --------eeeccccccccchhHHHHHHh------hCcEEEEECHHHHHHHHHHH-HHCCCeEEEEcCCchhHHHHHhCC
Confidence 123333332 11222222221 33599999999999999999 567999999999999999999999
Q ss_pred cceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhH
Q 001087 802 IGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDW 879 (1159)
Q Consensus 802 VGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~~~~~ 879 (1159)
|||++ +|++. |+++||+++.++++.... ++.+||++|+|+++++.|.+..|+...+..++..+ ++. .++.++
T Consensus 601 vGIAmg~gtd~--ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~~--~~l~p~ 674 (885)
T 3b8c_A 601 IGIAVADATDA--ARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL--IWE--FDFSAF 674 (885)
T ss_dssp SCCCCSSSHHH--HGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS--SCS--SCSCHH
T ss_pred EeEEeCCccHH--HHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccC--cCcCHH
Confidence 99999 45565 889999999999987766 79999999999999999999999876555554443 221 247889
Q ss_pred HHHHHHhhhhhhHHHhhhccccCCChhhhhcCchhhhccCcccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCccCCC-
Q 001087 880 FQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSS- 958 (1159)
Q Consensus 880 ~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~~~~~~~~~~~- 958 (1159)
+++|+|++.+..| ++++....+ +|. .+.... ..+.++.+++.|++.+++.++++++.....+..+
T Consensus 675 ~il~i~l~~d~~~-l~l~~~~~~--------~~~----~p~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 740 (885)
T 3b8c_A 675 MVLIIAILNDGTI-MTISKDRVK--------PSP----TPDSWK-LKEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDT 740 (885)
T ss_dssp HHHHHHHHHHTTT-CCCCCCCCC--------CSS----CCCSTT-TTTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCC
T ss_pred HHHHHHHHHHHHH-HhhcccccC--------ccc----CCcchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 9999999988765 777642221 121 112222 2334555667788887776654432111111000
Q ss_pred -Cc--c-cccccchhHHHHHHHHHHHHHHHHhhccchh--hHHH---HHHHHHHHHHHHHHHHhhccCCCCCCCceeeEe
Q 001087 959 -GK--I-FGIWDVSTMAFTCVVVTVNLRLLMMCNTITR--FHYI---TVGGSILAWFLFVFLYTGIMTPNDRQENVFFVI 1029 (1159)
Q Consensus 959 -g~--~-~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~--~~~~---~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1029 (1159)
|. . .....+.+++|...++...+ .++.+|+.++ +.+. .++..++..++.+ .+. .+. + ..+
T Consensus 741 ~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~---~--~~~ 809 (885)
T 3b8c_A 741 FGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRSWSFVERPGALLMIAFLIAQLIAT----LIA-VYA---N--WEF 809 (885)
T ss_dssp CCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCTTTSTTSTTTTTSGGGSSTTTTTT----SSS-SSC---C--CCS
T ss_pred cCcccccchHHHHHHHHHHHHHHHHHH-HHHHhccCCCCcccCccHHHHHHHHHHHHHHH----HHH-Hhc---c--ccc
Confidence 10 0 00112334444433333333 2455555432 2222 1111111111110 110 000 0 122
Q ss_pred eeec-cchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001087 1030 FVLM-STFYFYFTLILVPVLALLGDFIFQGVQRWF 1063 (1159)
Q Consensus 1030 ~~~~-~~~~~w~~~l~~~~~~l~~~~~~k~~~~~~ 1063 (1159)
+.+. .++..|+.+++..++.+++..+.|++.|+.
T Consensus 810 ~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 844 (885)
T 3b8c_A 810 AKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYI 844 (885)
T ss_dssp SCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC
T ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344 677888888888888888889999876654
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-72 Score=694.78 Aligned_cols=495 Identities=18% Similarity=0.229 Sum_probs=411.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHhh------ccceEEEee-CCeEEEeeccCcccceEEEEccCCccCceEEEEeecC
Q 001087 42 PLSLVLLVSLIKEAWEDWKRFQNDMTI------NSTPVEVLQ-GQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTN 114 (1159)
Q Consensus 42 pl~~vl~vs~ik~~~ed~~r~~~d~~~------n~~~~~V~r-~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~ 114 (1159)
..++++++..+.+.+|++.|+|+.+.+ .+.+++|+| ||++++|++++|+|||||+|++||.||||++|++
T Consensus 190 ~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~--- 266 (736)
T 3rfu_A 190 AAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE--- 266 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECS---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEE---
Confidence 344555666777899999998875544 367888887 8999999999999999999999999999999996
Q ss_pred CCCeEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeecccee
Q 001087 115 ADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSL 194 (1159)
Q Consensus 115 ~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l 194 (1159)
|.|+||||+|||||.|+.|++++. +|.||++.+|.
T Consensus 267 --G~~~VDES~LTGES~Pv~K~~gd~---------------------------v~~Gt~~~~G~---------------- 301 (736)
T 3rfu_A 267 --GRSFVDESMVTGEPIPVAKEASAK---------------------------VIGATINQTGS---------------- 301 (736)
T ss_dssp --SCEEEECSSSTTCSSCEEECTTCE---------------------------ECTTCEEESCC----------------
T ss_pred --CceEeeecccCCccccEEeccCCc---------------------------CCCceEeccce----------------
Confidence 667899999999999999998763 48888888877
Q ss_pred ecCCcEEEEEEEeccch---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCC
Q 001087 195 RNTEYIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGN 271 (1159)
Q Consensus 195 ~nt~~i~gvVv~tG~~T---k~~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~ 271 (1159)
++++|++||.+| ++++....++.+++|+|+.+|++..++++++++++++++++|.++.....|
T Consensus 302 -----~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~~~--------- 367 (736)
T 3rfu_A 302 -----FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQPAL--------- 367 (736)
T ss_dssp -----CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSST---------
T ss_pred -----EEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchH---------
Confidence 899999999999 556666677788999999999999999999999999988877655321111
Q ss_pred CccCCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCc
Q 001087 272 SVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQV 351 (1159)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V 351 (1159)
...+..++.+++.+|||+|+++++++...+ ..++ +++++++|+++.+|+||+|
T Consensus 368 ----------------~~~l~~ai~vlviacPcaL~la~p~a~~~~-~~~~----------a~~gilvk~~~alE~l~~v 420 (736)
T 3rfu_A 368 ----------------SYGLIAAVSVLIIACPCALGLATPMSIMVG-VGKG----------AQSGVLIKNAEALERMEKV 420 (736)
T ss_dssp ----------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHH-HHHH----------HHTTEEESCHHHHHHHTSC
T ss_pred ----------------HHHHHHHHHhHHHhhhhHHHHHHHHHHHHH-HHHH----------hhcceeechHHHHHHhcCC
Confidence 126788999999999999999999999999 8877 7899999999999999999
Q ss_pred eEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCCh
Q 001087 352 EYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNP 431 (1159)
Q Consensus 352 ~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (1159)
|+||||||||||+|+|++.++..++..
T Consensus 421 ~~i~fDKTGTLT~g~~~v~~i~~~~~~----------------------------------------------------- 447 (736)
T 3rfu_A 421 NTLVVDKTGTLTEGHPKLTRIVTDDFV----------------------------------------------------- 447 (736)
T ss_dssp CEEEECCBTTTBCSSCEEEEEEESSSC-----------------------------------------------------
T ss_pred CEEEEeCCCCCcCCceEEEEEEecCCC-----------------------------------------------------
Confidence 999999999999999999998732210
Q ss_pred hhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeE
Q 001087 432 DACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILN 511 (1159)
Q Consensus 432 ~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~ 511 (1159)
..+++...+.+ ++.++||.+.|++++|++.|+.+. .
T Consensus 448 --~~~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~~~----------------------------~ 483 (736)
T 3rfu_A 448 --EDNALALAAAL--------------EHQSEHPLANAIVHAAKEKGLSLG----------------------------S 483 (736)
T ss_dssp --HHHHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCCCC----------------------------C
T ss_pred --HHHHHHHHHHH--------------hhcCCChHHHHHHHHHHhcCCCcc----------------------------C
Confidence 01222222211 123579999999999998876421 2
Q ss_pred eecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHH
Q 001087 512 VLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNE 591 (1159)
Q Consensus 512 ~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~ 591 (1159)
..+|++.+++. +.... +|+ .+.+|+++.+.+.... .+...+.+++++.+|+|++++|+
T Consensus 484 ~~~f~~~~g~g-v~~~~-~g~--~~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~vl~va~------------- 541 (736)
T 3rfu_A 484 VEAFEAPTGKG-VVGQV-DGH--HVAIGNARLMQEHGGD-----NAPLFEKADELRGKGASVMFMAV------------- 541 (736)
T ss_dssp CSCCCCCTTTE-EEECS-SSS--CEEEESHHHHHHHCCC-----CHHHHHHHHHHHHTTCEEEEEEE-------------
T ss_pred cccccccCCce-EEEEE-CCE--EEEEcCHHHHHHcCCC-----hhHHHHHHHHHHhcCCeEEEEEE-------------
Confidence 34677777654 33332 443 2446999887654321 23456778899999999999996
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcccc
Q 001087 592 KFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINN 671 (1159)
Q Consensus 592 ~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~ 671 (1159)
|.+++|+++++|++|++++++|+.|+++||+++|+|||+..||.++|+++||..
T Consensus 542 -------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~- 595 (736)
T 3rfu_A 542 -------------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK- 595 (736)
T ss_dssp -------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC-
T ss_pred -------------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE-
Confidence 668999999999999999999999999999999999999999999999999831
Q ss_pred CceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHH
Q 001087 672 EMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLN 751 (1159)
Q Consensus 672 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~ 751 (1159)
T Consensus 596 -------------------------------------------------------------------------------- 595 (736)
T 3rfu_A 596 -------------------------------------------------------------------------------- 595 (736)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccch
Q 001087 752 LSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTD 830 (1159)
Q Consensus 752 l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~ 830 (1159)
+++|++|+||.++|+.+ +..|+.|+|+|||.||+|||++|||||++ +|++. |+++||+++.+.++...
T Consensus 596 --------v~a~~~P~~K~~~v~~l-~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~--a~~~AD~vl~~~~~~~i 664 (736)
T 3rfu_A 596 --------VVAEIMPEDKSRIVSEL-KDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDV--AIESAGVTLLHGDLRGI 664 (736)
T ss_dssp --------EECSCCHHHHHHHHHHH-HHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSH--HHHHCSEEECSCCSTTH
T ss_pred --------EEEecCHHHHHHHHHHH-HhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHH--HHHhCCEEEccCCHHHH
Confidence 89999999999999999 56789999999999999999999999999 77777 89999999998888776
Q ss_pred h-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 831 L-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQ 861 (1159)
Q Consensus 831 l-ll~~Gr~~~~ri~~~i~~~~~kni~~~~~~ 861 (1159)
. ++.+||..++++++++.|.|.+|++.+.+.
T Consensus 665 ~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplA 696 (736)
T 3rfu_A 665 AKARRLSESTMSNIRQNLFFAFIYNVLGVPLA 696 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 799999999999999999999999875543
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-71 Score=691.09 Aligned_cols=488 Identities=19% Similarity=0.251 Sum_probs=399.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHh------hccceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCC
Q 001087 44 SLVLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADG 117 (1159)
Q Consensus 44 ~~vl~vs~ik~~~ed~~r~~~d~~------~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g 117 (1159)
++++++..+.+++|++.++|+++. +.+.+++|+|+|++++++|++|+|||||.|++||.||||++|++ |
T Consensus 178 ~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~-----G 252 (723)
T 3j09_A 178 VLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-----G 252 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE-----C
Confidence 345555567789999999876443 34678999999999999999999999999999999999999997 6
Q ss_pred eEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecC
Q 001087 118 VCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNT 197 (1159)
Q Consensus 118 ~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt 197 (1159)
.|+||||+|||||.|+.|++++. .|+||++.+|.
T Consensus 253 ~~~VdeS~LTGES~pv~K~~g~~---------------------------v~~Gt~~~~g~------------------- 286 (723)
T 3j09_A 253 ESYVDESMISGEPVPVLKSKGDE---------------------------VFGATINNTGV------------------- 286 (723)
T ss_dssp CEEEECHHHHCCSSCEEECTTCE---------------------------ECTTCEECSSC-------------------
T ss_pred CeEEecccccCCCcceeecCCCe---------------------------eccceEEecCc-------------------
Confidence 68899999999999999987652 47777776665
Q ss_pred CcEEEEEEEeccch---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCcc
Q 001087 198 EYIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVE 274 (1159)
Q Consensus 198 ~~i~gvVv~tG~~T---k~~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~ 274 (1159)
+.++|++||.+| ++++....++.+++++++.+|+++.++++++++++++++++|.++... +|.
T Consensus 287 --~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~-~~~----------- 352 (723)
T 3j09_A 287 --LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA-PLL----------- 352 (723)
T ss_dssp --EEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTC-TTC-----------
T ss_pred --EEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cHH-----------
Confidence 999999999999 566777888889999999999999999999998888876654332110 110
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEE
Q 001087 275 DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYI 354 (1159)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I 354 (1159)
..+.+++.+++.+|||+|+++++++...+ ..++ +++++++|+++.+|+||++|+|
T Consensus 353 --------------~~~~~~i~vlvia~P~aL~la~p~a~~~~-~~~~----------a~~gilvk~~~~lE~lg~v~~i 407 (723)
T 3j09_A 353 --------------FAFTTLIAVLVVACPCAFGLATPTALTVG-MGKG----------AELGILIKNADALEVAEKVTAV 407 (723)
T ss_dssp --------------CSHHHHHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HTTTCEESSTTHHHHGGGCCEE
T ss_pred --------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHH-HHHH----------HHCCeEEeChHHHHHhhcCCEE
Confidence 15777899999999999999999999999 8877 7899999999999999999999
Q ss_pred EecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhH
Q 001087 355 FSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDAC 434 (1159)
Q Consensus 355 ~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (1159)
|||||||||+|+|++.++...+.. .
T Consensus 408 ~fDKTGTLT~g~~~v~~~~~~~~~-------------------------------------------------------~ 432 (723)
T 3j09_A 408 IFDKTGTLTKGKPEVTDLVPLNGD-------------------------------------------------------E 432 (723)
T ss_dssp EEEHHHHTSCSCCEEEEEEESSSC-------------------------------------------------------H
T ss_pred EEcCCCccccCceEEEEEEeCCCC-------------------------------------------------------H
Confidence 999999999999999998764310 1
Q ss_pred HHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeec
Q 001087 435 KEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLE 514 (1159)
Q Consensus 435 ~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~ 514 (1159)
.+++...+.|.. .++||++.|++++|++.|+.+... . +
T Consensus 433 ~~~l~~aa~~e~--------------~s~hP~~~Ai~~~a~~~~~~~~~~--------------------~--------~ 470 (723)
T 3j09_A 433 RELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEP--------------------E--------K 470 (723)
T ss_dssp HHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSC--------------------C--------C
T ss_pred HHHHHHHHHHhc--------------cCCCchhHHHHHHHHhcCCCcCCc--------------------c--------c
Confidence 234444444421 247999999999999988753211 0 1
Q ss_pred CCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHH
Q 001087 515 FNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFI 594 (1159)
Q Consensus 515 F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~ 594 (1159)
|.+...+ ++.. . .+++|+++.+.+... +..+...+++++++.+|+|++++|+
T Consensus 471 ~~~~~g~-g~~~----~---~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~va~---------------- 522 (723)
T 3j09_A 471 VEVIAGE-GVVA----D---GILVGNKRLMEDFGV----AVSNEVELALEKLEREAKTAVIVAR---------------- 522 (723)
T ss_dssp CEEETTT-EEEE----T---TEEEECHHHHHHTTC----CCCHHHHHHHHHHHTTTCEEEEEEE----------------
T ss_pred eEEecCC-ceEE----E---EEEECCHHHHHhcCC----CccHHHHHHHHHHHhcCCeEEEEEE----------------
Confidence 1111111 1110 1 245688877654322 2335677888999999999999995
Q ss_pred HHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCce
Q 001087 595 QAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK 674 (1159)
Q Consensus 595 ~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~ 674 (1159)
|++++|+++++|++|++++++|+.|+++||++||+|||+.+||.++|+++|+.
T Consensus 523 ----------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~----- 575 (723)
T 3j09_A 523 ----------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----- 575 (723)
T ss_dssp ----------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----
T ss_pred ----------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc-----
Confidence 67999999999999999999999999999999999999999999999999983
Q ss_pred EEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhh
Q 001087 675 QFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSL 754 (1159)
Q Consensus 675 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~ 754 (1159)
T Consensus 576 -------------------------------------------------------------------------------- 575 (723)
T 3j09_A 576 -------------------------------------------------------------------------------- 575 (723)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-h
Q 001087 755 NCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-L 832 (1159)
Q Consensus 755 ~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-l 832 (1159)
.++||++|+||+.+|+.+++ . +.|+|+|||.||+|||++|||||++ +|++. |+++||+++.+.++.... +
T Consensus 576 ----~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~ 647 (723)
T 3j09_A 576 ----LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA 647 (723)
T ss_dssp ----EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECCCCSCC--SSCCSSEECSSCCTTHHHHH
T ss_pred ----EEEccCCHHHHHHHHHHHhc-C-CeEEEEECChhhHHHHhhCCEEEEeCCCcHH--HHHhCCEEEeCCCHHHHHHH
Confidence 28999999999999999954 4 8999999999999999999999999 67776 899999999888876665 6
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001087 833 LVHGRWSYLRICKVVLYFFYKNLTFTLTQ 861 (1159)
Q Consensus 833 l~~Gr~~~~ri~~~i~~~~~kni~~~~~~ 861 (1159)
+.+||+.|+++++++.|.|++|++.+...
T Consensus 648 i~~~r~~~~~i~~nl~~a~~~n~~~i~~a 676 (723)
T 3j09_A 648 IQLSRKTMSKIKQNIFWALIYNVILIPAA 676 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999864443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-70 Score=680.37 Aligned_cols=487 Identities=19% Similarity=0.253 Sum_probs=398.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhH------hhccceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCC
Q 001087 44 SLVLLVSLIKEAWEDWKRFQNDM------TINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADG 117 (1159)
Q Consensus 44 ~~vl~vs~ik~~~ed~~r~~~d~------~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g 117 (1159)
++++++..+.+++|++.++|+++ .+.+++++|+|||+++++++++|+|||||+|++||.||||++|++ |
T Consensus 100 ~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~-----G 174 (645)
T 3j08_A 100 VLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-----G 174 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE-----C
Confidence 34445556778999999887643 345688999999999999999999999999999999999999997 5
Q ss_pred eEEEeccCCCCCCcceeeeccccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecC
Q 001087 118 VCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNT 197 (1159)
Q Consensus 118 ~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt 197 (1159)
.|+||||+|||||.|+.|++++. .|+||++.+|.
T Consensus 175 ~~~VdeS~LTGES~Pv~K~~g~~---------------------------v~~Gt~~~~g~------------------- 208 (645)
T 3j08_A 175 ESYVDESMISGEPVPVLKSKGDE---------------------------VFGATINNTGV------------------- 208 (645)
T ss_dssp CEEEECHHHHCCSSCEEECTTCE---------------------------ECTTCEECSSC-------------------
T ss_pred cEEEEcccccCCCCceecCCCCE---------------------------eeccEEEecCc-------------------
Confidence 68899999999999999987652 47777776665
Q ss_pred CcEEEEEEEeccch---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccCCCCCcc
Q 001087 198 EYIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVE 274 (1159)
Q Consensus 198 ~~i~gvVv~tG~~T---k~~~n~~~~~~k~s~l~~~~n~~~~~l~~~~~~l~~i~~i~~~~~~~~~~wy~~~~~~~~~~~ 274 (1159)
++++|++||.+| ++++....++.+++++++.+|+++.+++++++++++++++.|.++... +|.
T Consensus 209 --~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~-~~~----------- 274 (645)
T 3j08_A 209 --LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA-PLL----------- 274 (645)
T ss_dssp --EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSC-SCC-----------
T ss_pred --EEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cHH-----------
Confidence 999999999999 566777888889999999999999999999999888877654332111 111
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEE
Q 001087 275 DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYI 354 (1159)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I 354 (1159)
..+.+++.+++.+|||+|+++++++...+ ..++ +++++++|+++.+|+||++|+|
T Consensus 275 --------------~~~~~~i~vlvia~P~aL~la~p~a~~~~-~~~~----------a~~gilvk~~~~lE~lg~v~~i 329 (645)
T 3j08_A 275 --------------FAFTTLIAVLVVACPCAFGLATPTALTVG-MGKG----------AELGILIKNADALEVAEKVTAV 329 (645)
T ss_dssp --------------CTTTTTHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HTTCCCCSSTTHHHHGGGCCEE
T ss_pred --------------HHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHH----------HHCCeEecCchHHHHhhCCCEE
Confidence 14566788899999999999999999999 8877 7899999999999999999999
Q ss_pred EecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhccccCCCChhhH
Q 001087 355 FSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDAC 434 (1159)
Q Consensus 355 ~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (1159)
|||||||||+|+|++.++...+. ..
T Consensus 330 ~fDKTGTLT~~~~~v~~~~~~~~-------------------------------------------------------~~ 354 (645)
T 3j08_A 330 IFDKTGTLTKGKPEVTDLVPLNG-------------------------------------------------------DE 354 (645)
T ss_dssp EEEGGGTSSSSCCEEEEEEESSS-------------------------------------------------------CH
T ss_pred EEcCcccccCCCeEEEEEEeCCC-------------------------------------------------------CH
Confidence 99999999999999999976431 01
Q ss_pred HHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeec
Q 001087 435 KEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLE 514 (1159)
Q Consensus 435 ~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~ 514 (1159)
.+++...+.|+. .++||++.|++++|++.|+.+... . +
T Consensus 355 ~~~l~~aa~~e~--------------~s~hPla~Aiv~~a~~~g~~~~~~--------------------~--------~ 392 (645)
T 3j08_A 355 RELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEP--------------------E--------K 392 (645)
T ss_dssp HHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSC--------------------C--------C
T ss_pred HHHHHHHHHHhh--------------cCCChhHHHHHHHHHhcCCCcCCc--------------------c--------c
Confidence 234444444422 247999999999999988753211 0 1
Q ss_pred CCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHH
Q 001087 515 FNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFI 594 (1159)
Q Consensus 515 F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~ 594 (1159)
|.+...+ ++.. . .+++|+++.+.+... ...+...+++++++.+|+|++++|+
T Consensus 393 ~~~~~g~-g~~~----~---~v~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~l~va~---------------- 444 (645)
T 3j08_A 393 VEVIAGE-GVVA----D---GILVGNKRLMEDFGV----AVSNEVELALEKLEREAKTAVIVAR---------------- 444 (645)
T ss_dssp CEEETTT-EEEE----T---TEEEECHHHHHHTTC----CCCHHHHHHHHHHHTTTCCCEEEEE----------------
T ss_pred eEEecCC-ceEE----E---EEEECCHHHHHhcCC----CccHHHHHHHHHHHhcCCeEEEEEE----------------
Confidence 1111111 1110 1 245688877654321 2345677888999999999999995
Q ss_pred HHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCce
Q 001087 595 QAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK 674 (1159)
Q Consensus 595 ~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~ 674 (1159)
|++++|+++++|++|++++++|+.|+++||++||+|||+.++|.++|+++|+.
T Consensus 445 ----------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~----- 497 (645)
T 3j08_A 445 ----------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----- 497 (645)
T ss_dssp ----------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----
T ss_pred ----------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-----
Confidence 67899999999999999999999999999999999999999999999999983
Q ss_pred EEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhh
Q 001087 675 QFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSL 754 (1159)
Q Consensus 675 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~ 754 (1159)
T Consensus 498 -------------------------------------------------------------------------------- 497 (645)
T 3j08_A 498 -------------------------------------------------------------------------------- 497 (645)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-h
Q 001087 755 NCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-L 832 (1159)
Q Consensus 755 ~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-l 832 (1159)
.++||++|+||..+|+.+++ . +.|+|+|||.||++||++|||||++ +|++. |+++||+++.+.++.... +
T Consensus 498 ----~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~ 569 (645)
T 3j08_A 498 ----LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA 569 (645)
T ss_dssp ----EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEECCCSCC--SSCCSSSEESSCCTTHHHHH
T ss_pred ----EEEEeCCHHhHHHHHHHHhh-C-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHH--HHHhCCEEEecCCHHHHHHH
Confidence 28999999999999999954 4 8999999999999999999999999 66776 899999999887776655 6
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 001087 833 LVHGRWSYLRICKVVLYFFYKNLTFTLT 860 (1159)
Q Consensus 833 l~~Gr~~~~ri~~~i~~~~~kni~~~~~ 860 (1159)
+.+||+.|+++++++.|.|++|++.+..
T Consensus 570 i~~~r~~~~~i~~nl~~a~~~N~~~i~l 597 (645)
T 3j08_A 570 IQLSRKTMSKIKQNIFWALIYNVILIPA 597 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999985444
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-25 Score=246.82 Aligned_cols=138 Identities=23% Similarity=0.303 Sum_probs=115.4
Q ss_pred CcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHH
Q 001087 617 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE 696 (1159)
Q Consensus 617 dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 696 (1159)
+-.+.|.+.++|+++||++++|+.|++.|++++|+|||+..++..++..+||..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 345889999999999999999999999999999999999999999999888721
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHH
Q 001087 697 IARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLV 776 (1159)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~l 776 (1159)
+|+.+.|++|..+++.+
T Consensus 178 ---------------------------------------------------------------~f~~~~p~~k~~~~~~l 194 (263)
T 2yj3_A 178 ---------------------------------------------------------------YYSNLSPEDKVRIIEKL 194 (263)
Confidence 45556699999999999
Q ss_pred HhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHH
Q 001087 777 KKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKV 846 (1159)
Q Consensus 777 k~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~ 846 (1159)
+..+..|+|||||.||++|+++|++||++ .+.+. +...||+++...++.... ++..+|..+++++++
T Consensus 195 -~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~--~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 195 -KQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDI--SKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 56677899999999999999999999977 44444 677899999544443333 588899999988753
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.86 E-value=5.9e-21 Score=214.49 Aligned_cols=272 Identities=22% Similarity=0.276 Sum_probs=190.7
Q ss_pred CCCCccccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCC
Q 001087 333 SNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKG 412 (1159)
Q Consensus 333 ~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (1159)
+++++++|+++.+|.|++++.|+||||||||.+.+.+.++...+. +
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~------~---------------------------- 59 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------D---------------------------- 59 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS------C----------------------------
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC------C----------------------------
Confidence 789999999999999999999999999999999999988765431 0
Q ss_pred CCCCChhhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEE
Q 001087 413 FNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVR 492 (1159)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~ 492 (1159)
..+++. +|+.+ +. .+.||.+.|+.+++++.|+.....
T Consensus 60 ---------------------~~~~l~---~~~~~--e~---------~s~hp~~~a~~~~~~~~g~~~~~~-------- 96 (287)
T 3a1c_A 60 ---------------------ERELLR---LAAIA--ER---------RSEHPIAEAIVKKALEHGIELGEP-------- 96 (287)
T ss_dssp ---------------------HHHHHH---HHHHH--TT---------TCCSHHHHHHHHHHHHTTCCCCCC--------
T ss_pred ---------------------HHHHHH---HHHHH--hh---------cCCCHHHHHHHHHHHhcCCCcccc--------
Confidence 012222 22222 11 247999999999999998742110
Q ss_pred eccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCe
Q 001087 493 ESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLR 572 (1159)
Q Consensus 493 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR 572 (1159)
..+.. +. .+++.. . .+.+|.++.+.+... +..+...+..+.+..+|.+
T Consensus 97 ------------~~~~~---~~------G~~~~~----~---~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~ 144 (287)
T 3a1c_A 97 ------------EKVEV---IA------GEGVVA----D---GILVGNKRLMEDFGV----AVSNEVELALEKLEREAKT 144 (287)
T ss_dssp ------------SCEEE---ET------TTEEEE----T---TEEEECHHHHHHTTC----CCCHHHHHHHHHHHHTTCE
T ss_pred ------------cccee---ec------CCCeEE----E---EEEECCHHHHHhcCC----CccHHHHHHHHHHHhCCCe
Confidence 00100 00 001100 1 133566554432111 1112345567788889999
Q ss_pred EEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEe
Q 001087 573 TLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLT 652 (1159)
Q Consensus 573 tL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLT 652 (1159)
++++++ |..++|.+..++++.+|+.++++.|+++|+++.++|
T Consensus 145 ~i~~~~--------------------------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T 186 (287)
T 3a1c_A 145 AVIVAR--------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMIT 186 (287)
T ss_dssp EEEEEE--------------------------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEE--------------------------------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEe
Confidence 999986 457899999999999999999999999999999999
Q ss_pred CCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEE
Q 001087 653 GDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALII 732 (1159)
Q Consensus 653 GD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 732 (1159)
|+....+..+...+|+..
T Consensus 187 ~~~~~~~~~~l~~~gl~~-------------------------------------------------------------- 204 (287)
T 3a1c_A 187 GDNWRSAEAISRELNLDL-------------------------------------------------------------- 204 (287)
T ss_dssp SSCHHHHHHHHHHHTCSE--------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHhCCce--------------------------------------------------------------
Confidence 999999999999888721
Q ss_pred cccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceeec-Cccc
Q 001087 733 DGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEG 811 (1159)
Q Consensus 733 ~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~ 811 (1159)
+|+.+.|..|...++.+. .. ..++||||+.||+.|.++|++||++. +.+.
T Consensus 205 ---------------------------~f~~i~~~~K~~~~~~l~-~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~ 255 (287)
T 3a1c_A 205 ---------------------------VIAEVLPHQKSEEVKKLQ-AK-EVVAFVGDGINDAPALAQADLGIAVGSGSDV 255 (287)
T ss_dssp ---------------------------EECSCCTTCHHHHHHHHT-TT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCC
T ss_pred ---------------------------eeeecChHHHHHHHHHHh-cC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHH
Confidence 555666999999999884 44 88999999999999999999999883 3332
Q ss_pred hhhhhccceeeccccccchh-hhhhhhhHHHHHH
Q 001087 812 MQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRIC 844 (1159)
Q Consensus 812 ~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~ 844 (1159)
+...+|+++.+.++...+ ++..+|..+++|+
T Consensus 256 --~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 256 --AVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp --SSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred --HHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 456799999433333322 5888998888764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=7e-19 Score=196.05 Aligned_cols=274 Identities=23% Similarity=0.268 Sum_probs=184.9
Q ss_pred ccCCcccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCCh
Q 001087 339 ARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDP 418 (1159)
Q Consensus 339 ~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (1159)
+|+++.+|.|++++.|+|||+||||.|.|++.++...+.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~----------------------------------------- 39 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH----------------------------------------- 39 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS-----------------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC-----------------------------------------
Confidence 478889999999999999999999999999998754321
Q ss_pred hhhhccccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccc
Q 001087 419 RLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEK 498 (1159)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~ 498 (1159)
...+++..++.+.. .+.+|...++.+++++.|+....
T Consensus 40 --------------~~~~~~~~~~~~~~--------------~s~~~~~~a~~~~~~~~g~~~~~--------------- 76 (280)
T 3skx_A 40 --------------SEDELLQIAASLEA--------------RSEHPIAAAIVEEAEKRGFGLTE--------------- 76 (280)
T ss_dssp --------------CHHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCC---------------
T ss_pred --------------CHHHHHHHHHHhhc--------------cCCCHHHHHHHHHHHhcCCCCCC---------------
Confidence 01123333332211 13578899999999998864311
Q ss_pred cCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEE
Q 001087 499 MGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAY 578 (1159)
Q Consensus 499 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~ 578 (1159)
...+ ..++ .+.+...+ ++.. +..|.++.+.+...... ....++...+.+.+.+++
T Consensus 77 -----~~~~---~~~~----g~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 131 (280)
T 3skx_A 77 -----VEEF---RAIP----GKGVEGIV---NGRR--YMVVSPGYIRELGIKTD--------ESVEKLKQQGKTVVFILK 131 (280)
T ss_dssp -----CEEE---EEET----TTEEEEEE---TTEE--EEEECHHHHHHTTCCCC--------TTHHHHHTTTCEEEEEEE
T ss_pred -----ccce---eecC----CCEEEEEE---CCEE--EEEecHHHHHHcCCCch--------HHHHHHHhCCCeEEEEEE
Confidence 0111 1111 11122222 2221 22366666544322211 234566788888888774
Q ss_pred EecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhH
Q 001087 579 RDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMET 658 (1159)
Q Consensus 579 r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eT 658 (1159)
+..++|...++|++++|+.++++.|++.|+++.++||+....
T Consensus 132 --------------------------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~ 173 (280)
T 3skx_A 132 --------------------------------------NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFV 173 (280)
T ss_dssp --------------------------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred --------------------------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 557899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchh
Q 001087 659 AINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLM 738 (1159)
Q Consensus 659 Ai~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 738 (1159)
+..+...+|+..
T Consensus 174 ~~~~~~~~gl~~-------------------------------------------------------------------- 185 (280)
T 3skx_A 174 AKWVAEELGLDD-------------------------------------------------------------------- 185 (280)
T ss_dssp HHHHHHHHTCSE--------------------------------------------------------------------
T ss_pred HHHHHHHcCChh--------------------------------------------------------------------
Confidence 999999888731
Q ss_pred HhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceeec-Cccchhhhhc
Q 001087 739 YALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMA 817 (1159)
Q Consensus 739 ~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~a 817 (1159)
.|..+.|.+|...++-+.+ .. .++|||||.||+.|+++|++||++. +.+. ++.+
T Consensus 186 ---------------------~f~~~~~~~k~~~~k~~~~-~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~--~~~~ 240 (280)
T 3skx_A 186 ---------------------YFAEVLPHEKAEKVKEVQQ-KY-VTAMVGDGVNDAPALAQADVGIAIGAGTDV--AVET 240 (280)
T ss_dssp ---------------------EECSCCGGGHHHHHHHHHT-TS-CEEEEECTTTTHHHHHHSSEEEECSCCSSS--CCCS
T ss_pred ---------------------HhHhcCHHHHHHHHHHHHh-cC-CEEEEeCCchhHHHHHhCCceEEecCCcHH--HHhh
Confidence 5667779999999988843 33 5699999999999999999999883 3443 6778
Q ss_pred cceeeccccccchh-hhhhhhhHHHHHHHHHHHHHH
Q 001087 818 SDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFY 852 (1159)
Q Consensus 818 sD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~ 852 (1159)
||+++...+..... ++..+|..++++++++.|++.
T Consensus 241 a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 241 ADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp SSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred CCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998555544433 578899999999888887764
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.80 E-value=6e-20 Score=173.75 Aligned_cols=100 Identities=17% Similarity=0.268 Sum_probs=89.5
Q ss_pred hhHhhccceEEEeeCCeEEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccc
Q 001087 64 NDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWD 143 (1159)
Q Consensus 64 ~d~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~ 143 (1159)
+...+.+.+++|+|+|+++++++++|+|||+|.|++||.||||++++++ .|+||||+|||||.|+.|.+++
T Consensus 5 ~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g-----~~~vdeS~LTGEs~pv~k~~g~---- 75 (113)
T 2hc8_A 5 KLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG-----ESYVDESMISGEPVPVLKSKGD---- 75 (113)
T ss_dssp HHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC-----CEEEECHHHHCCSSCEEECTTC----
T ss_pred HHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-----eEEEEccccCCCCccEEECCCC----
Confidence 3455678899999999999999999999999999999999999999984 4789999999999999998865
Q ss_pred cCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhc
Q 001087 144 YLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMN 216 (1159)
Q Consensus 144 ~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n 216 (1159)
..|+||++.+|. +.++|++||.+|.+.+.
T Consensus 76 -----------------------~v~aGt~~~~G~---------------------~~~~V~~~g~~T~~~~i 104 (113)
T 2hc8_A 76 -----------------------EVFGATINNTGV---------------------LKIRATRVGGETLLAQI 104 (113)
T ss_dssp -----------------------EECTTCEECSSC---------------------EEEEEEECGGGSHHHHH
T ss_pred -----------------------EEEeCCEEeece---------------------EEEEEEEecCcCHHHHH
Confidence 359999999888 99999999999976543
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-18 Score=176.45 Aligned_cols=140 Identities=18% Similarity=0.190 Sum_probs=108.2
Q ss_pred HHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecC
Q 001087 436 EFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEF 515 (1159)
Q Consensus 436 ~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F 515 (1159)
+.++..++|+.... ..++|.|.|+++++...+.. .....|+++..+||
T Consensus 17 ~vl~~a~L~s~~~~-----------~~~n~~d~Ail~~~~~~~~~---------------------~~~~~~~~~~eiPF 64 (170)
T 3gwi_A 17 RVLHSAWLNSHYQT-----------GLKNLLDTAVLEGTDEESAR---------------------SLASRWQKIDEIPF 64 (170)
T ss_dssp HHHHHHHHHHHHCC-----------SCCCHHHHHHHHTSCHHHHH---------------------HHHHHSEEEEEECC
T ss_pred HHHHHHHHcCCCCC-----------CCCChHHHHHHHHHHhcChh---------------------hhhhcCeEEeeEec
Confidence 55667777754321 12689999999987543310 01346889999999
Q ss_pred CCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhc---------CChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHH
Q 001087 516 NSTRKRQSVVCRYADGRLVLYCKGADSVIYERLAN---------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMY 586 (1159)
Q Consensus 516 ~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~---------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~ 586 (1159)
+|+|||||++++.++|+.++|+||||++|+++|+. -+++.++.+.+.+++||.+|+|||++|||+++.++.
T Consensus 65 ds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~ 144 (170)
T 3gwi_A 65 DFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREG 144 (170)
T ss_dssp CTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSS
T ss_pred CcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcc
Confidence 99999999999988888999999999999999974 234567788999999999999999999999975421
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeeccc
Q 001087 587 ERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDK 629 (1159)
Q Consensus 587 ~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~ 629 (1159)
. .....|+||+|+|++|+-|.
T Consensus 145 ~----------------------~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 145 D----------------------YQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp C----------------------CCGGGSCSEEEEEEEEEEC-
T ss_pred c----------------------cCccccCCcEEEehhccccc
Confidence 0 01235899999999999875
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=5.3e-18 Score=163.37 Aligned_cols=98 Identities=16% Similarity=0.243 Sum_probs=86.2
Q ss_pred hHhhccceEEEeeCCe------EEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeecc
Q 001087 65 DMTINSTPVEVLQGQR------WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKAL 138 (1159)
Q Consensus 65 d~~~n~~~~~V~r~g~------~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~ 138 (1159)
...+.+..++|+|+|. +++++.++|+|||+|.|++||.||||++|++++. +||||+|||||.|+.|.+.
T Consensus 12 L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-----~vdeS~LTGEs~pv~k~~g 86 (124)
T 2kij_A 12 LISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-----MVDESLITGEAMPVAKKPG 86 (124)
T ss_dssp HHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-----EEECTTTTCCSSCEECCTT
T ss_pred HhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-----EEEeccccCCCccEEeCCC
Confidence 4456788999999763 7899999999999999999999999999998654 5999999999999999886
Q ss_pred ccccccCChhhhcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhh
Q 001087 139 ERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM 215 (1159)
Q Consensus 139 ~~~~~~~~~~~~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~ 215 (1159)
+ .+|+||++.+|. +.++|+.||.+|.+.+
T Consensus 87 ~---------------------------~v~aGt~~~~G~---------------------~~~~v~~~g~~T~~~~ 115 (124)
T 2kij_A 87 S---------------------------TVIAGSINQNGS---------------------LLICATHVGADTTLSQ 115 (124)
T ss_dssp E---------------------------EECTTCEEESSC---------------------CEEEECSCTTTCHHHH
T ss_pred C---------------------------EEEcCCEEeeeE---------------------EEEEEEEecccCHHHH
Confidence 5 459999999887 9999999999997644
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.53 E-value=4.5e-15 Score=167.28 Aligned_cols=143 Identities=12% Similarity=0.101 Sum_probs=106.3
Q ss_pred ecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHH
Q 001087 626 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEV 705 (1159)
Q Consensus 626 ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1159)
..+++++|++++++.|+++|+++.|+|||...++..||+++|+..++..++.-...-
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~----------------------- 194 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDF----------------------- 194 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEE-----------------------
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEE-----------------------
Confidence 357999999999999999999999999999999999999999976654432211000
Q ss_pred HHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEE
Q 001087 706 KRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITL 785 (1159)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl 785 (1159)
........+.|+.. ..+++..|.+|...+..+ +..++.|+
T Consensus 195 ------------------~~~~~~~~~~~~~i---------------------~~~~k~~~~~k~~~~~~~-~~~~~~v~ 234 (297)
T 4fe3_A 195 ------------------DENGVLKGFKGELI---------------------HVFNKHDGALKNTDYFSQ-LKDNSNII 234 (297)
T ss_dssp ------------------CTTSBEEEECSSCC---------------------CTTCHHHHHHTCHHHHHH-TTTCCEEE
T ss_pred ------------------cccceeEecccccc---------------------chhhcccHHHHHHHHHHh-hccCCEEE
Confidence 00111122222211 156778899998888888 67788999
Q ss_pred EecCCccCHHHHH---hcccceeec--Cccch----hhhhccceeeccccccchh
Q 001087 786 SIGDGANDVSMIQ---AAHIGVGIS--GQEGM----QAVMASDFAIAQFRFLTDL 831 (1159)
Q Consensus 786 ~iGDG~NDv~mL~---~AdVGIgis--g~e~~----qA~~asD~~i~~f~~l~~l 831 (1159)
|+|||+||+||++ .|||||+|. +.+.. .|++++|++|.++++....
T Consensus 235 ~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~ 289 (297)
T 4fe3_A 235 LLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVV 289 (297)
T ss_dssp EEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHH
T ss_pred EEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHH
Confidence 9999999999955 999999652 32221 1689999999999998755
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.95 E-value=5.9e-10 Score=116.44 Aligned_cols=136 Identities=14% Similarity=0.095 Sum_probs=100.7
Q ss_pred EEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHH
Q 001087 619 TLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIA 698 (1159)
Q Consensus 619 ~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 698 (1159)
..++...++|.+ +|+.|+++|+++.++||+..+.+..++..+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 345555555544 9999999999999999999999999999999832
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHh
Q 001087 699 RFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKK 778 (1159)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~ 778 (1159)
++..+ ..|...++.+.+
T Consensus 88 -------------------------------------------------------------~f~~~--~~K~~~~~~~~~ 104 (189)
T 3mn1_A 88 -------------------------------------------------------------LFQGR--EDKLVVLDKLLA 104 (189)
T ss_dssp -------------------------------------------------------------EECSC--SCHHHHHHHHHH
T ss_pred -------------------------------------------------------------HhcCc--CChHHHHHHHHH
Confidence 11111 566666666644
Q ss_pred ccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccc------cccchhhhhhhhhHHHHHHHHHH
Q 001087 779 GAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQF------RFLTDLLLVHGRWSYLRICKVVL 848 (1159)
Q Consensus 779 ~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f------~~l~~lll~~Gr~~~~ri~~~i~ 848 (1159)
..| ..++||||+.||++|+++|++|+++ .+.+. ++..||+++.+. +.+.. ++...|..++++.+.+.
T Consensus 105 ~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~--~~~~ad~v~~~~~~~G~~~~l~~-~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 105 ELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASF--VREHAHGITRAQGGEGAAREFCE-LILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHHTSSEECSSCTTTTHHHHHHH-HHHHHTTCHHHHHHTTS
T ss_pred HcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHH--HHHhCCEEecCCCCCcHHHHHHH-HHHHccCcHHHHHHHHh
Confidence 433 6799999999999999999999998 44443 677899999874 22333 35567888999999888
Q ss_pred HHHHHH
Q 001087 849 YFFYKN 854 (1159)
Q Consensus 849 ~~~~kn 854 (1159)
|.+.+|
T Consensus 182 ~~~~~~ 187 (189)
T 3mn1_A 182 EGHHHH 187 (189)
T ss_dssp TTC---
T ss_pred cccccc
Confidence 877665
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.80 E-value=6.8e-09 Score=118.73 Aligned_cols=152 Identities=20% Similarity=0.158 Sum_probs=98.3
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.+|+.++++.|+++|+++.|+||+....+..++..+|+..--...+.+...
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~--------------------------- 230 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSG--------------------------- 230 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCC---------------------------
Confidence 68999999999999999999999999999999999999984211111111000
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhcc---CcEEE
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA---RKITL 785 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~---g~~vl 785 (1159)
.++|.... --..++.|...++.+.+.. ...++
T Consensus 231 ----------------------~~tg~~~~-----------------------~~~~~kpk~~~~~~~~~~lgi~~~~~v 265 (335)
T 3n28_A 231 ----------------------KLTGQVLG-----------------------EVVSAQTKADILLTLAQQYDVEIHNTV 265 (335)
T ss_dssp ----------------------EEEEEEES-----------------------CCCCHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred ----------------------eeeeeecc-----------------------cccChhhhHHHHHHHHHHcCCChhhEE
Confidence 01110000 0012345555555543333 36799
Q ss_pred EecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccchh-hhhhhhhHHHHHHHHHHHHHHHH
Q 001087 786 SIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKN 854 (1159)
Q Consensus 786 ~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ri~~~i~~~~~kn 854 (1159)
|||||.||++|+++|++||++.+.+. .+..||+++...++...+ +|......-+|++.++.+.+.+|
T Consensus 266 ~vGDs~nDi~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 266 AVGDGANDLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp EEECSGGGHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--------
T ss_pred EEeCCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccccccccc
Confidence 99999999999999999999966665 677899998655554444 45444455567777777777665
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=3.2e-08 Score=102.29 Aligned_cols=129 Identities=15% Similarity=0.077 Sum_probs=90.6
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHH
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKREL 709 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (1159)
+.++..++|+.|+++|++++++||+....+..++..+|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 34456799999999999999999999999999999988731
Q ss_pred HHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC---cEEEE
Q 001087 710 NKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR---KITLS 786 (1159)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g---~~vl~ 786 (1159)
++.. ...|...++.+.+..| ..++|
T Consensus 77 --------------------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~ 104 (180)
T 1k1e_A 77 --------------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAY 104 (180)
T ss_dssp --------------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------------------------------------eecC--CCCcHHHHHHHHHHcCCCHHHEEE
Confidence 1111 1345666555434444 67999
Q ss_pred ecCCccCHHHHHhcccceeec-Cccchhhhhccceeeccccccc---hh--hhhhhhhHHHHHHHHHHHHH
Q 001087 787 IGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRFLT---DL--LLVHGRWSYLRICKVVLYFF 851 (1159)
Q Consensus 787 iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f~~l~---~l--ll~~Gr~~~~ri~~~i~~~~ 851 (1159)
|||+.||++|++.|++++.+. +.+. ++..||+++.+..... .+ .+...|..|+++...+.|.+
T Consensus 105 vGD~~~Di~~~~~ag~~~~~~~~~~~--~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~ 173 (180)
T 1k1e_A 105 IGDDSVDLPAFAACGTSFAVADAPIY--VKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVFDTAQGFLK 173 (180)
T ss_dssp EECSGGGHHHHHHSSEEEECTTSCHH--HHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHHHCHHHHHH
T ss_pred ECCCHHHHHHHHHcCCeEEeCCccHH--HHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhhhhccchhh
Confidence 999999999999999999883 4443 5678999998753221 11 12334444666665555543
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.64 E-value=4.5e-08 Score=103.78 Aligned_cols=107 Identities=12% Similarity=0.115 Sum_probs=83.0
Q ss_pred EEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHH
Q 001087 620 LIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIAR 699 (1159)
Q Consensus 620 llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 699 (1159)
.+....+.|.+ +++.|+++|+++.++||+..+.+..++..+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34455555554 9999999999999999999999999999999831
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhc
Q 001087 700 FMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG 779 (1159)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~ 779 (1159)
++..+ ..|..+++.+.+.
T Consensus 118 ------------------------------------------------------------~f~~~--k~K~~~l~~~~~~ 135 (211)
T 3ij5_A 118 ------------------------------------------------------------LYQGQ--SDKLVAYHELLAT 135 (211)
T ss_dssp ------------------------------------------------------------EECSC--SSHHHHHHHHHHH
T ss_pred ------------------------------------------------------------hhccc--CChHHHHHHHHHH
Confidence 22222 5566766666444
Q ss_pred c---CcEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeeccc
Q 001087 780 A---RKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 780 ~---g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f 825 (1159)
. ...++||||+.||++|+++|++++++. +.+. ++..||+++...
T Consensus 136 lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~--~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 136 LQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPL--LLPKAHYVTRIK 183 (211)
T ss_dssp HTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTT--TGGGSSEECSSC
T ss_pred cCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHH--HHhhCCEEEeCC
Confidence 3 467999999999999999999999984 4443 677899998764
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.62 E-value=6.2e-08 Score=99.76 Aligned_cols=105 Identities=15% Similarity=0.128 Sum_probs=80.6
Q ss_pred EEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHH
Q 001087 620 LIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIAR 699 (1159)
Q Consensus 620 llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 699 (1159)
.+....+.|.+ +|+.|+++|+++.++||+....+..++..+|+-
T Consensus 36 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------------------------ 79 (176)
T 3mmz_A 36 EFVSVHRGDGL------GIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------------------------ 79 (176)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC------------------------------
T ss_pred HhHhcccccHH------HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe------------------------------
Confidence 34445555544 899999999999999999999999999998872
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhc
Q 001087 700 FMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG 779 (1159)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~ 779 (1159)
+++.. ..|...++.+.+.
T Consensus 80 ------------------------------------------------------------~~~~~--~~k~~~l~~~~~~ 97 (176)
T 3mmz_A 80 ------------------------------------------------------------VLHGI--DRKDLALKQWCEE 97 (176)
T ss_dssp ------------------------------------------------------------EEESC--SCHHHHHHHHHHH
T ss_pred ------------------------------------------------------------eEeCC--CChHHHHHHHHHH
Confidence 11111 4566666555444
Q ss_pred cC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeecc
Q 001087 780 AR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 780 ~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~ 824 (1159)
.| ..++|+||+.||++|++.|++|+++ .+.+. ++..||+++.+
T Consensus 98 ~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~--~~~~ad~v~~~ 144 (176)
T 3mmz_A 98 QGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDV--VRGAARAVTTV 144 (176)
T ss_dssp HTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHH--HHHHSSEECSS
T ss_pred cCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHH--HHHhCCEEecC
Confidence 43 6799999999999999999999998 44443 66789999987
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.54 E-value=4e-08 Score=102.84 Aligned_cols=96 Identities=19% Similarity=0.171 Sum_probs=74.8
Q ss_pred HHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHh
Q 001087 637 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEA 716 (1159)
Q Consensus 637 tI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1159)
.|+.|+++|+++.|+||+....+..++..+|+..
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------------------------- 93 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------------------------- 93 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE----------------------------------------------
Confidence 3999999999999999999999999999999831
Q ss_pred hhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhcc---CcEEEEecCCccC
Q 001087 717 QQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA---RKITLSIGDGAND 793 (1159)
Q Consensus 717 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~---g~~vl~iGDG~ND 793 (1159)
++... +.|...++.+.+.. ...+++|||+.||
T Consensus 94 -------------------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nD 128 (195)
T 3n07_A 94 -------------------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLID 128 (195)
T ss_dssp -------------------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGG
T ss_pred -------------------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHH
Confidence 12222 44555555543433 3579999999999
Q ss_pred HHHHHhcccceeec-Cccchhhhhccceeeccc
Q 001087 794 VSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 794 v~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f 825 (1159)
++|+++|++|+++. +.+. ++..||+++...
T Consensus 129 i~~~~~ag~~va~~na~~~--~~~~ad~v~~~~ 159 (195)
T 3n07_A 129 WPVMEKVALRVCVADGHPL--LAQRANYVTHIK 159 (195)
T ss_dssp HHHHTTSSEEEECTTSCHH--HHHHCSEECSSC
T ss_pred HHHHHHCCCEEEECChHHH--HHHhCCEEEcCC
Confidence 99999999999984 4443 678899998753
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.53 E-value=9.5e-08 Score=97.35 Aligned_cols=106 Identities=16% Similarity=0.146 Sum_probs=80.3
Q ss_pred CcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHH--HcCccccCceEEEEecCCcccchhcccCCh
Q 001087 617 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAY--ACNLINNEMKQFIITSETNAIRDVEERGDP 694 (1159)
Q Consensus 617 dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~--~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~ 694 (1159)
+-..++.+.++|.. +|+.|+++|+++.|+||+ ..+..++. .+|+.
T Consensus 30 ~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 34567777777774 899999999999999999 67777777 44431
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHH
Q 001087 695 VEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTS 774 (1159)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~ 774 (1159)
++ ..+.+|...++
T Consensus 77 -----------------------------------------------------------------~~--~g~~~K~~~l~ 89 (168)
T 3ewi_A 77 -----------------------------------------------------------------TE--VSVSDKLATVD 89 (168)
T ss_dssp -----------------------------------------------------------------EE--CSCSCHHHHHH
T ss_pred -----------------------------------------------------------------EE--ECCCChHHHHH
Confidence 01 11346777776
Q ss_pred HHHhccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeecc
Q 001087 775 LVKKGAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 775 ~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~ 824 (1159)
.+.+..| .-++|+||+.||++|++.|++++++ .+.+. ++..||+++..
T Consensus 90 ~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~--~k~~Ad~v~~~ 141 (168)
T 3ewi_A 90 EWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSG--AQKAVGYICKC 141 (168)
T ss_dssp HHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCHH--HHTTCSEECSS
T ss_pred HHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhHH--HHHhCCEEeCC
Confidence 6645443 5799999999999999999999999 44444 77899999875
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=2e-07 Score=94.43 Aligned_cols=109 Identities=18% Similarity=0.077 Sum_probs=80.6
Q ss_pred HHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHh
Q 001087 637 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEA 716 (1159)
Q Consensus 637 tI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1159)
+++.|+++|+++.++||+....+..++..+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999998842
Q ss_pred hhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhcc---CcEEEEecCCccC
Q 001087 717 QQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA---RKITLSIGDGAND 793 (1159)
Q Consensus 717 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~---g~~vl~iGDG~ND 793 (1159)
++... +.|...++.+.+.. ...++||||+.||
T Consensus 73 -------------------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~D 107 (164)
T 3e8m_A 73 -------------------------------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLND 107 (164)
T ss_dssp -------------------------------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGG
T ss_pred -------------------------------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 11111 33555444443333 3579999999999
Q ss_pred HHHHHhcccceee-cCccchhhhhccceeecccc------ccchhhhhhhhhH
Q 001087 794 VSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFR------FLTDLLLVHGRWS 839 (1159)
Q Consensus 794 v~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~------~l~~lll~~Gr~~ 839 (1159)
++|.+.|++++.+ .+.+. +...||+++.+.+ .+...++ +|+|.
T Consensus 108 i~~~~~ag~~~~~~~~~~~--~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~~ 157 (164)
T 3e8m_A 108 AKLLKRVGIAGVPASAPFY--IRRLSTIFLEKRGGEGVFREFVEKVL-GINLE 157 (164)
T ss_dssp HHHHTTSSEEECCTTSCHH--HHTTCSSCCCCCTTTTHHHHHHHHHT-TCCHH
T ss_pred HHHHHHCCCeEEcCChHHH--HHHhCcEEeccCCCCcHHHHHHHHHH-ccCch
Confidence 9999999999987 44444 6788999998744 2223334 77654
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.43 E-value=1.7e-07 Score=97.78 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=73.1
Q ss_pred HHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhh
Q 001087 638 IETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQ 717 (1159)
Q Consensus 638 I~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1159)
|+.|+++|+++.++||+....+..++..+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999998842
Q ss_pred hhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEec--ChhhHHHHHHHHHhccCcEEEEecCCccCHH
Q 001087 718 QYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRV--SPLQKAQVTSLVKKGARKITLSIGDGANDVS 795 (1159)
Q Consensus 718 ~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~--sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~ 795 (1159)
++..+ .|+-...+.+.+ .-....++||||+.||++
T Consensus 88 ------------------------------------------~~~~~kpk~~~~~~~~~~~-~~~~~~~~~vGD~~~Di~ 124 (191)
T 3n1u_A 88 ------------------------------------------YYKGQVDKRSAYQHLKKTL-GLNDDEFAYIGDDLPDLP 124 (191)
T ss_dssp ------------------------------------------EECSCSSCHHHHHHHHHHH-TCCGGGEEEEECSGGGHH
T ss_pred ------------------------------------------ceeCCCChHHHHHHHHHHh-CCCHHHEEEECCCHHHHH
Confidence 11111 233333344444 333467999999999999
Q ss_pred HHHhcccceeecC-ccchhhhhccceeecccc
Q 001087 796 MIQAAHIGVGISG-QEGMQAVMASDFAIAQFR 826 (1159)
Q Consensus 796 mL~~AdVGIgisg-~e~~qA~~asD~~i~~f~ 826 (1159)
|++.|++++++.+ .+. +...||+++.+..
T Consensus 125 ~~~~ag~~~~~~~~~~~--~~~~ad~v~~~~~ 154 (191)
T 3n1u_A 125 LIQQVGLGVAVSNAVPQ--VLEFADWRTERTG 154 (191)
T ss_dssp HHHHSSEEEECTTCCHH--HHHHSSEECSSCT
T ss_pred HHHHCCCEEEeCCccHH--HHHhCCEEecCCC
Confidence 9999999998843 333 6778999998743
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.41 E-value=2.2e-07 Score=99.87 Aligned_cols=178 Identities=13% Similarity=0.075 Sum_probs=96.2
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccch--hc-c-cCChHHHHHHHH
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRD--VE-E-RGDPVEIARFMR 702 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~--~~-~-~~~~~~~~~~~~ 702 (1159)
..++.+.+.++|+.|+++|++++++||+....+..++..+|+-. ..+..++. .+.. .+ . ... .+ +..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~---~~I~~NGa--~i~~~~~~~i~~~~--~l-~~~- 90 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGG--IMFDNDGSIKKFFS--NE-GTN- 90 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGT--EEECTTSCEEESSC--SH-HHH-
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC---eEEEeCCc--EEEeCCCCEEEEec--cH-HHH-
Confidence 34677889999999999999999999999999999999998742 12221111 0100 00 0 000 01 111
Q ss_pred HHHHHHHHHHHHHhhh-hccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceE-----EEecCh--hhHHHHHH
Q 001087 703 EEVKRELNKCIDEAQQ-YIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVV-----CCRVSP--LQKAQVTS 774 (1159)
Q Consensus 703 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI-----~~R~sP--~qK~~iV~ 774 (1159)
..+ +.+.+.. ..+. +...-....+.. + +. ..+++..+.+.+. ....+ +..+.| ..|...++
T Consensus 91 ~~i-~~~~~~~-~~~~~~~~~~~~~~~~~-~----~~-~~~~~~~~~~~~~---~~~~~~~~~~~~ei~~~~~~K~~~l~ 159 (227)
T 1l6r_A 91 KFL-EEMSKRT-SMRSILTNRWREASTGF-D----ID-PEDVDYVRKEAES---RGFVIFYSGYSWHLMNRGEDKAFAVN 159 (227)
T ss_dssp HHH-HHHTTTS-SCBCCGGGGGCSSSEEE-B----CC-GGGHHHHHHHHHT---TTEEEEEETTEEEEEETTCSHHHHHH
T ss_pred HHH-HHHHHHh-cCCccccccceecccce-E----Ee-cCCHHHHHHHHHh---cCEEEEecCcEEEEecCCCCHHHHHH
Confidence 111 1111100 0000 000000000000 0 00 0111111222211 11111 223446 68999888
Q ss_pred HHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeecccc
Q 001087 775 LVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFR 826 (1159)
Q Consensus 775 ~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f~ 826 (1159)
.+.+..| ..++++|||.||.+|++.|++||++. +.+. .+..||+++.+..
T Consensus 160 ~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~~--~k~~a~~v~~~~~ 213 (227)
T 1l6r_A 160 KLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDN--IKAVSDFVSDYSY 213 (227)
T ss_dssp HHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHH--HHHHCSEECSCCT
T ss_pred HHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCchHH--HHHhCCEEecCCC
Confidence 8865544 56999999999999999999999984 3443 5678999886543
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.2e-06 Score=103.04 Aligned_cols=134 Identities=25% Similarity=0.286 Sum_probs=97.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.+|+.++++.|++.|+++.++||.....+..++..+|+-.--...+.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~------------------------------- 304 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELE------------------------------- 304 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEE-------------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEE-------------------------------
Confidence 7999999999999999999999999999999999999998321000000
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEe-----cChhhHHHHHHHHHhccC--
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR-----VSPLQKAQVTSLVKKGAR-- 781 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R-----~sP~qK~~iV~~lk~~~g-- 781 (1159)
+.+| ++.++ +.++.|..+++.+.++.|
T Consensus 305 ----------------------~~dg------------------------~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~ 338 (415)
T 3p96_A 305 ----------------------IVDG------------------------TLTGRVVGPIIDRAGKATALREFAQRAGVP 338 (415)
T ss_dssp ----------------------EETT------------------------EEEEEECSSCCCHHHHHHHHHHHHHHHTCC
T ss_pred ----------------------EeCC------------------------EEEeeEccCCCCCcchHHHHHHHHHHcCcC
Confidence 1111 12222 126677777776655544
Q ss_pred -cEEEEecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccchh-hhhhhhhHHH
Q 001087 782 -KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYL 841 (1159)
Q Consensus 782 -~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~l-ll~~Gr~~~~ 841 (1159)
..++|||||.||++|+++|++|+++.+.+. .+..||+++...++...+ ++-.+|.-+.
T Consensus 339 ~~~~i~vGD~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~~~l~~ll~~l~~~~~~~~ 398 (415)
T 3p96_A 339 MAQTVAVGDGANDIDMLAAAGLGIAFNAKPA--LREVADASLSHPYLDTVLFLLGVTRGEIE 398 (415)
T ss_dssp GGGEEEEECSGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECSSCTTHHHHHTTCCHHHHH
T ss_pred hhhEEEEECCHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEccCCHHHHHHHhCCCHHHHH
Confidence 569999999999999999999999966655 567899999876665544 4555554443
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.31 E-value=1.3e-06 Score=92.26 Aligned_cols=129 Identities=20% Similarity=0.235 Sum_probs=90.3
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
-++.+|+.++++.|++.|++++++|+.....+..+...+|+..--...+.....
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND-------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC--------------------------
Confidence 468999999999999999999999999999999999888874311111111000
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEec-ChhhHHHHHHHHHhccC---cE
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRV-SPLQKAQVTSLVKKGAR---KI 783 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~-sP~qK~~iV~~lk~~~g---~~ 783 (1159)
.++| .+.+.+ .+..|..+++.+.+..| ..
T Consensus 128 -----------------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~ 160 (217)
T 3m1y_A 128 -----------------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTN 160 (217)
T ss_dssp -----------------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTT
T ss_pred -----------------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhH
Confidence 0000 011111 24566666666544433 56
Q ss_pred EEEecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccchh
Q 001087 784 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL 831 (1159)
Q Consensus 784 vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~l 831 (1159)
+++|||+.||+.|++.|++++++.+.+. .+..||+++.+.++...+
T Consensus 161 ~i~vGDs~~Di~~a~~aG~~~~~~~~~~--l~~~ad~v~~~~dl~~~~ 206 (217)
T 3m1y_A 161 TLVVGDGANDLSMFKHAHIKIAFNAKEV--LKQHATHCINEPDLALIK 206 (217)
T ss_dssp EEEEECSGGGHHHHTTCSEEEEESCCHH--HHTTCSEEECSSBGGGGT
T ss_pred EEEEeCCHHHHHHHHHCCCeEEECccHH--HHHhcceeecccCHHHHH
Confidence 8999999999999999999999966555 567899999877665544
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=8.5e-07 Score=92.21 Aligned_cols=109 Identities=15% Similarity=0.164 Sum_probs=78.8
Q ss_pred HHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHh
Q 001087 637 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEA 716 (1159)
Q Consensus 637 tI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1159)
+|+.|+++|+++.++||+....+..+....|+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------------------------- 94 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------------------------- 94 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce----------------------------------------------
Confidence 8999999999999999999999999998888731
Q ss_pred hhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC---cEEEEecCCccC
Q 001087 717 QQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR---KITLSIGDGAND 793 (1159)
Q Consensus 717 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g---~~vl~iGDG~ND 793 (1159)
++.. ...|...++.+.+..| ..++||||+.||
T Consensus 95 -------------------------------------------~~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~D 129 (188)
T 2r8e_A 95 -------------------------------------------LYQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLID 129 (188)
T ss_dssp -------------------------------------------EECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGG
T ss_pred -------------------------------------------eecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 1111 1334444444434333 579999999999
Q ss_pred HHHHHhcccceeec-Cccchhhhhccceeeccc-------cccchhhhhhhhh
Q 001087 794 VSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQF-------RFLTDLLLVHGRW 838 (1159)
Q Consensus 794 v~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f-------~~l~~lll~~Gr~ 838 (1159)
+.|.+.|++++.+. +.+. +...||+++.+. .++..++-.+|+|
T Consensus 130 i~~a~~ag~~~~~~~~~~~--~~~~ad~v~~~~~~~g~~~~~l~~ll~~~~~~ 180 (188)
T 2r8e_A 130 WPVMEKVGLSVAVADAHPL--LIPRADYVTRIAGGRGAVREVCDLLLLAQGKL 180 (188)
T ss_dssp HHHHTTSSEEEECTTSCTT--TGGGSSEECSSCTTTTHHHHHHHHHHHHTTCC
T ss_pred HHHHHHCCCEEEecCcCHH--HHhcCCEEEeCCCCCcHHHHHHHHHHHhcCcH
Confidence 99999999999773 4333 556799999876 3333344456654
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.30 E-value=5.1e-07 Score=93.86 Aligned_cols=116 Identities=20% Similarity=0.284 Sum_probs=85.8
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.+|+.++++.|++.|++++++||+....+..+ ..+|+-.- ...+...
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~----------------------------- 127 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFE----------------------------- 127 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEE-----------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEee-----------------------------
Confidence 7899999999999999999999999998888777 77776321 1111110
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEec
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 788 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iG 788 (1159)
++ ..-.....|..|+..++.+ ....+++||
T Consensus 128 ------------------------~~-----------------------~~~~~~~~~~~k~~~l~~l---~~~~~i~iG 157 (201)
T 4ap9_A 128 ------------------------DG-----------------------KFQGIRLRFRDKGEFLKRF---RDGFILAMG 157 (201)
T ss_dssp ------------------------TT-----------------------EEEEEECCSSCHHHHHGGG---TTSCEEEEE
T ss_pred ------------------------CC-----------------------ceECCcCCccCHHHHHHhc---CcCcEEEEe
Confidence 00 0011455678898888777 456789999
Q ss_pred CCccCHHHHHhcccceeecCccchhhhhccceeeccccccch
Q 001087 789 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTD 830 (1159)
Q Consensus 789 DG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~~ 830 (1159)
|+.||+.|++.|++||++..... .||+++.++.-+..
T Consensus 158 D~~~Di~~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~ 194 (201)
T 4ap9_A 158 DGYADAKMFERADMGIAVGREIP-----GADLLVKDLKELVD 194 (201)
T ss_dssp CTTCCHHHHHHCSEEEEESSCCT-----TCSEEESSHHHHHH
T ss_pred CCHHHHHHHHhCCceEEECCCCc-----cccEEEccHHHHHH
Confidence 99999999999999999854332 78999987655443
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.30 E-value=1.9e-06 Score=97.38 Aligned_cols=124 Identities=16% Similarity=0.201 Sum_probs=85.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.+|+.++++.|+++|+++.++||.....+..+...+|+..--...+.....
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg--------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN--------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------------------
Confidence 48999999999999999999999999999999999999984211011111000
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEE-ecChhhHHHHHHHHHhccC---cEE
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCC-RVSPLQKAQVTSLVKKGAR---KIT 784 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~-R~sP~qK~~iV~~lk~~~g---~~v 784 (1159)
.++|. +.+ -..++-|..+++.+.+..| ..+
T Consensus 232 ----------------------~~tg~------------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~ 265 (317)
T 4eze_A 232 ----------------------VLTDN------------------------ITLPIMNAANKKQTLVDLAARLNIATENI 265 (317)
T ss_dssp ----------------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGE
T ss_pred ----------------------eeeee------------------------EecccCCCCCCHHHHHHHHHHcCCCcceE
Confidence 00110 000 0124566666655544433 579
Q ss_pred EEecCCccCHHHHHhcccceeecCccchhhhhccceeeccccc
Q 001087 785 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 827 (1159)
Q Consensus 785 l~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~ 827 (1159)
+||||+.||++|.+.|++|+.+.+.+. ....+|.++...++
T Consensus 266 i~VGDs~~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~~~~L 306 (317)
T 4eze_A 266 IACGDGANDLPMLEHAGTGIAWKAKPV--VREKIHHQINYHGF 306 (317)
T ss_dssp EEEECSGGGHHHHHHSSEEEEESCCHH--HHHHCCEEESSSCG
T ss_pred EEEeCCHHHHHHHHHCCCeEEeCCCHH--HHHhcCeeeCCCCH
Confidence 999999999999999999999965554 55678888754333
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=4.1e-06 Score=87.65 Aligned_cols=121 Identities=21% Similarity=0.264 Sum_probs=81.3
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.+++.++++.|++.|+++.+.||.....+..+...+|+..--...+.... .
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------------------- 128 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKD-G-------------------------- 128 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET-T--------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEEC-C--------------------------
Confidence 5678999999999999999999999988888777777776210000000000 0
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEe-cChhhHHHHHHHHHhccC---cEE
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR-VSPLQKAQVTSLVKKGAR---KIT 784 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R-~sP~qK~~iV~~lk~~~g---~~v 784 (1159)
.++|+ +.+. +.+..|...+..+.+..| ..+
T Consensus 129 ----------------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~ 162 (211)
T 1l7m_A 129 ----------------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDT 162 (211)
T ss_dssp ----------------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGE
T ss_pred ----------------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHE
Confidence 00110 0001 124577666655544444 459
Q ss_pred EEecCCccCHHHHHhcccceeecCccchhhhhccceeecc
Q 001087 785 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 785 l~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~ 824 (1159)
+++||+.||++|++.|++++++.+.+. .+..||+++.+
T Consensus 163 ~~iGD~~~Di~~~~~ag~~~~~~~~~~--~~~~a~~v~~~ 200 (211)
T 1l7m_A 163 VAVGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEK 200 (211)
T ss_dssp EEEECSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECS
T ss_pred EEEecChhHHHHHHHCCCEEEECCCHH--HHhhcceeecc
Confidence 999999999999999999999875544 45679999876
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.21 E-value=6e-07 Score=99.39 Aligned_cols=74 Identities=30% Similarity=0.426 Sum_probs=51.4
Q ss_pred ecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeecccc------ccch
Q 001087 763 RVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFR------FLTD 830 (1159)
Q Consensus 763 R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~------~l~~ 830 (1159)
.+.|. .|...++.+.+..| .-|+++||+.||.+|++.|++||++ .+.+. .+.+||++..+.+ .+.+
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~--~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEP--VKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHHHCSEECCCGGGTHHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHH--HHHhCCEEcCCCCCcHHHHHHHH
Confidence 45565 88888887766554 4699999999999999999999999 44444 6788999987533 3444
Q ss_pred hhhhhhhh
Q 001087 831 LLLVHGRW 838 (1159)
Q Consensus 831 lll~~Gr~ 838 (1159)
++..+|+.
T Consensus 268 ~~~~~~~~ 275 (279)
T 4dw8_A 268 IFNVEGHH 275 (279)
T ss_dssp HC------
T ss_pred HHhccccc
Confidence 55666654
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=8.1e-06 Score=81.41 Aligned_cols=107 Identities=16% Similarity=0.265 Sum_probs=76.3
Q ss_pred cCChhHHHHHHHHHHc-CcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecc
Q 001087 462 AASPDEAALVTAAKNF-GFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGA 540 (1159)
Q Consensus 462 ~~spdE~Alv~~a~~~-g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA 540 (1159)
+++|...|++++|++. |..... . ... .....+|++..++..|.+ +|+ -+.+|+
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~----------~--------~~~---~~~~~~F~a~~G~~Gv~v---~G~--~v~vGn 102 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERD----------V--------QSL---HATFVPFTAQSRMSGINI---DNR--MIRKGS 102 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCC----------H--------HHH---TCEEEEEETTTTEEEEEE---TTE--EEEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCccc----------c--------ccc---ccceeeccccCCCCeEEE---CCE--EEEEeC
Confidence 4799999999999986 653210 0 000 012357888888778754 553 466899
Q ss_pred hhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEE
Q 001087 541 DSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTL 620 (1159)
Q Consensus 541 ~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~l 620 (1159)
+..|.+.+...+-...+.+.+.+++++.+|.+++++|. |-.+
T Consensus 103 ~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~--------------------------------------d~~l 144 (156)
T 1svj_A 103 VDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVE--------------------------------------GSRV 144 (156)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEE--------------------------------------TTEE
T ss_pred cHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEE--------------------------------------CCEE
Confidence 88777766543222334567788999999999999994 5689
Q ss_pred EEEeeecccccC
Q 001087 621 IGCTAIEDKLQE 632 (1159)
Q Consensus 621 lG~~~ieD~lq~ 632 (1159)
+|++++.|++|+
T Consensus 145 ~GvIalaD~iK~ 156 (156)
T 1svj_A 145 LGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEecCCCC
Confidence 999999999996
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.15 E-value=1.9e-06 Score=95.31 Aligned_cols=75 Identities=20% Similarity=0.229 Sum_probs=45.2
Q ss_pred EecCh--hhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeecccc------ccc
Q 001087 762 CRVSP--LQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFR------FLT 829 (1159)
Q Consensus 762 ~R~sP--~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~------~l~ 829 (1159)
..+.| -.|+.-++.+.+..| .-|+++||+.||.+|++.|++||++ .+.+. .+.+||++..+.+ .+.
T Consensus 189 ~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~--~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 189 IEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDE--VKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp EEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCH--HHHHCSCBC------CHHHHHC
T ss_pred EEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHH--HHHhcceeccCCCccHHHHHHH
Confidence 34455 359988888766655 5699999999999999999999999 44554 6788999976532 344
Q ss_pred hhhhhhhhh
Q 001087 830 DLLLVHGRW 838 (1159)
Q Consensus 830 ~lll~~Gr~ 838 (1159)
++++-+|+.
T Consensus 267 ~~~~~~~~~ 275 (279)
T 3mpo_A 267 KYALNEGHH 275 (279)
T ss_dssp ---------
T ss_pred HHhcccCcc
Confidence 445555653
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.12 E-value=6.7e-06 Score=86.36 Aligned_cols=133 Identities=18% Similarity=0.225 Sum_probs=84.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
.+.+|+.++++.|++.|+++.++||.....+..+....|+.... .+..
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~------------------------------ 129 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFAV------------------------------ 129 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEEE------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEEe------------------------------
Confidence 38899999999999999999999999999999999998884321 1100
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEec
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 788 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iG 788 (1159)
.+++++.... ..+.....+|..|...+.....-....++|+|
T Consensus 130 --------------------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vG 171 (219)
T 3kd3_A 130 --------------------ETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIG 171 (219)
T ss_dssp --------------------EEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEE
T ss_pred --------------------eeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEE
Confidence 0011000000 00122233456666655443233457899999
Q ss_pred CCccCHHHHHh--cccceeec-Cccchhhhhccceeeccccccchh
Q 001087 789 DGANDVSMIQA--AHIGVGIS-GQEGMQAVMASDFAIAQFRFLTDL 831 (1159)
Q Consensus 789 DG~NDv~mL~~--AdVGIgis-g~e~~qA~~asD~~i~~f~~l~~l 831 (1159)
|+.||++|+++ +.+||+.. +......+..||+++.++.-+..+
T Consensus 172 D~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~ 217 (219)
T 3kd3_A 172 DGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVARNVAELASL 217 (219)
T ss_dssp SSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHH
T ss_pred CCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHh
Confidence 99999999965 23455542 222222456799999886665544
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.08 E-value=6.7e-06 Score=87.51 Aligned_cols=129 Identities=20% Similarity=0.244 Sum_probs=86.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
-++.+|+.++++.|+++|++++++||.....+..+...+|+...+ .+...
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~~~---------------------------- 134 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANR---------------------------- 134 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEEC----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEeee----------------------------
Confidence 368999999999999999999999999999999999999985311 11000
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEe-c-----ChhhHHHHHHHHHhccC
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR-V-----SPLQKAQVTSLVKKGAR 781 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R-~-----sP~qK~~iV~~lk~~~g 781 (1159)
+..+. ..++.+. . .+..|..+++.+.+..|
T Consensus 135 ----------------------~~~~~----------------------~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~ 170 (225)
T 1nnl_A 135 ----------------------LKFYF----------------------NGEYAGFDETQPTAESGGKGKVIKLLKEKFH 170 (225)
T ss_dssp ----------------------EEECT----------------------TSCEEEECTTSGGGSTTHHHHHHHHHHHHHC
T ss_pred ----------------------EEEcC----------------------CCcEecCCCCCcccCCCchHHHHHHHHHHcC
Confidence 00000 0011121 1 13456666665544444
Q ss_pred -cEEEEecCCccCHHHHHhcccceeecCcc-chhhhhccceeeccccccch
Q 001087 782 -KITLSIGDGANDVSMIQAAHIGVGISGQE-GMQAVMASDFAIAQFRFLTD 830 (1159)
Q Consensus 782 -~~vl~iGDG~NDv~mL~~AdVGIgisg~e-~~qA~~asD~~i~~f~~l~~ 830 (1159)
..+++|||+.||+.|.++|+++|++.... .......+|+++.++.-+..
T Consensus 171 ~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 221 (225)
T 1nnl_A 171 FKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLG 221 (225)
T ss_dssp CSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC
T ss_pred CCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHH
Confidence 57999999999999999999988874321 11233468999988665543
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.05 E-value=4.1e-06 Score=95.39 Aligned_cols=72 Identities=18% Similarity=0.261 Sum_probs=52.8
Q ss_pred hhhHHHHHHHHHhcc-CcEEEEecCCccCHHHHHhc----ccceeecCccchhhhhccceeeccccc------cchhhhh
Q 001087 766 PLQKAQVTSLVKKGA-RKITLSIGDGANDVSMIQAA----HIGVGISGQEGMQAVMASDFAIAQFRF------LTDLLLV 834 (1159)
Q Consensus 766 P~qK~~iV~~lk~~~-g~~vl~iGDG~NDv~mL~~A----dVGIgisg~e~~qA~~asD~~i~~f~~------l~~lll~ 834 (1159)
+.+|+..++-++... .++|+++|||.||++|++.| ++||++.+.+. ++.+||+++.+.+. +.. ++.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vamna~~~--lk~~Ad~v~~~~~~dGV~~~l~~-~~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIISPTAMSEAKVIEL-FME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEECSSTHHHHHHHHH-HHH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEecCCHH--HHhhCcEEecCCCCCHHHHHHHH-HHH
Confidence 678999888774322 25599999999999999999 99999943443 67889999875333 222 256
Q ss_pred hhhhHH
Q 001087 835 HGRWSY 840 (1159)
Q Consensus 835 ~Gr~~~ 840 (1159)
.||..+
T Consensus 282 ~~~~~~ 287 (332)
T 1y8a_A 282 RKERAF 287 (332)
T ss_dssp HGGGGG
T ss_pred cCCchh
Confidence 777665
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.00 E-value=1.8e-05 Score=84.55 Aligned_cols=41 Identities=17% Similarity=0.033 Sum_probs=38.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++||.....+..++..+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999999999999984
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=97.98 E-value=8.4e-06 Score=90.47 Aligned_cols=61 Identities=20% Similarity=0.276 Sum_probs=48.4
Q ss_pred ecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccc
Q 001087 763 RVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 763 R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f 825 (1159)
.+.|. .|+.-++.+.+..| .-|+++||+.||.+|++.|++||++ .+.+. .+.+||++..+.
T Consensus 204 ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~--~k~~A~~v~~s~ 270 (283)
T 3dao_A 204 DCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQE--VIAAAKHTCAPY 270 (283)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHH--HHHHSSEEECCG
T ss_pred EEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHH--HHHhcCeECCCC
Confidence 34453 59998888766665 5699999999999999999999999 44444 678999998753
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.96 E-value=8.4e-06 Score=94.13 Aligned_cols=41 Identities=12% Similarity=0.188 Sum_probs=39.0
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
.++.+++.+.|+.|+++|++|||+||.-.+.+..+|.++|+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 35899999999999999999999999999999999999987
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.95 E-value=2.2e-05 Score=87.18 Aligned_cols=76 Identities=18% Similarity=0.276 Sum_probs=52.7
Q ss_pred hhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeecccc------ccchhhhhhh
Q 001087 767 LQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFR------FLTDLLLVHG 836 (1159)
Q Consensus 767 ~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f~------~l~~lll~~G 836 (1159)
..|+..++.+.+..| .-|+++||+.||.+|++.|++||++. +.+. .+..||++..+.. ++.+++..++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~--~k~~Ad~v~~s~~edGv~~~i~~~~~~~~ 278 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPE--IKRKADWVTRSNDEQGVAYMMKEYFRMQQ 278 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHHHSSEECCCTTTTHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHH--HHHhcCEECCCCCccHHHHHHHHHHHhcC
Confidence 569888887766655 46999999999999999999999994 4444 7788999986533 2344445566
Q ss_pred hhHHHHHH
Q 001087 837 RWSYLRIC 844 (1159)
Q Consensus 837 r~~~~ri~ 844 (1159)
++-|.+-.
T Consensus 279 ~~~~~~~~ 286 (290)
T 3dnp_A 279 RKGFLDKF 286 (290)
T ss_dssp HC------
T ss_pred cccHHhHh
Confidence 66555433
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=1.6e-05 Score=83.21 Aligned_cols=126 Identities=18% Similarity=0.128 Sum_probs=83.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCc-eEEEEecCCcccchhcccCChHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEM-KQFIITSETNAIRDVEERGDPVEIARFMREEVK 706 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (1159)
-++.+|+.++++.|++.|+++.++|+.....+..+....|+..--. ..
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 117 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD------------------------------- 117 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG-------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce-------------------------------
Confidence 3678999999999999999999999999998888888888742100 00
Q ss_pred HHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhcc---CcE
Q 001087 707 RELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA---RKI 783 (1159)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~---g~~ 783 (1159)
++.+.. .. .+-|...++.+.+.. ..-
T Consensus 118 ------------------------i~~~~~-------------------------~~--~kp~~~~~~~~~~~~g~~~~~ 146 (205)
T 3m9l_A 118 ------------------------VLGRDE-------------------------AP--PKPHPGGLLKLAEAWDVSPSR 146 (205)
T ss_dssp ------------------------EECTTT-------------------------SC--CTTSSHHHHHHHHHTTCCGGG
T ss_pred ------------------------EEeCCC-------------------------CC--CCCCHHHHHHHHHHcCCCHHH
Confidence 000000 00 111222222222333 356
Q ss_pred EEEecCCccCHHHHHhccc-ceee-cCccchhhhhccceeeccccccchhhhhhhh
Q 001087 784 TLSIGDGANDVSMIQAAHI-GVGI-SGQEGMQAVMASDFAIAQFRFLTDLLLVHGR 837 (1159)
Q Consensus 784 vl~iGDG~NDv~mL~~AdV-GIgi-sg~e~~qA~~asD~~i~~f~~l~~lll~~Gr 837 (1159)
+++|||+.||+.|.++|.+ +|++ .|.+. ....||+++.++.-+..++=.+++
T Consensus 147 ~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~--~~~~ad~v~~~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 147 MVMVGDYRFDLDCGRAAGTRTVLVNLPDNP--WPELTDWHARDCAQLRDLLSAEGH 200 (205)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEECSSSSCS--CGGGCSEECSSHHHHHHHHHHTTC
T ss_pred EEEECCCHHHHHHHHHcCCEEEEEeCCCCc--ccccCCEEeCCHHHHHHHHHhccc
Confidence 9999999999999999999 9988 44433 455799999887666555433443
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.86 E-value=2.3e-05 Score=78.88 Aligned_cols=106 Identities=14% Similarity=0.141 Sum_probs=76.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
.+.+++.++++.|+++|+++.++||.....+..+....|+..
T Consensus 36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-------------------------------------- 77 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE-------------------------------------- 77 (162)
T ss_dssp EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE--------------------------------------
T ss_pred eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh--------------------------------------
Confidence 345677899999999999999999999999999998888731
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhc---cCcEEE
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITL 785 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~---~g~~vl 785 (1159)
.+.. +..|...++.+.+. ....++
T Consensus 78 ---------------------------------------------------~~~~--~kp~~~~~~~~~~~~~~~~~~~~ 104 (162)
T 2p9j_A 78 ---------------------------------------------------IYTG--SYKKLEIYEKIKEKYSLKDEEIG 104 (162)
T ss_dssp ---------------------------------------------------EEEC--C--CHHHHHHHHHHTTCCGGGEE
T ss_pred ---------------------------------------------------hccC--CCCCHHHHHHHHHHcCCCHHHEE
Confidence 1111 12233333222122 235699
Q ss_pred EecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccc
Q 001087 786 SIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRF 827 (1159)
Q Consensus 786 ~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~ 827 (1159)
+|||+.||+.|.+.|++++.+ .+.+. ....||+++.+..-
T Consensus 105 ~vGD~~~Di~~a~~ag~~~~~~~~~~~--~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 105 FIGDDVVDIEVMKKVGFPVAVRNAVEE--VRKVAVYITQRNGG 145 (162)
T ss_dssp EEECSGGGHHHHHHSSEEEECTTSCHH--HHHHCSEECSSCSS
T ss_pred EECCCHHHHHHHHHCCCeEEecCccHH--HHhhCCEEecCCCC
Confidence 999999999999999999877 44443 45679999887554
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=97.82 E-value=6.8e-05 Score=78.41 Aligned_cols=119 Identities=18% Similarity=0.186 Sum_probs=83.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.+|+.++++.|++. +++.++|+.....+..+...+|+..--...+....+.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 121 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCc--------------------------
Confidence 5789999999999999 9999999999999999999998842100011110000
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEE--ecChhhHHHHHHHHHhccCcEEEE
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCC--RVSPLQKAQVTSLVKKGARKITLS 786 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~--R~sP~qK~~iV~~lk~~~g~~vl~ 786 (1159)
.... .-.|..|...++.+ ......++|
T Consensus 122 --------------------------------------------------~~~~~~~p~p~~~~~~l~~l-~~~~~~~~~ 150 (206)
T 1rku_A 122 --------------------------------------------------RVVGYQLRQKDPKRQSVIAF-KSLYYRVIA 150 (206)
T ss_dssp --------------------------------------------------CEEEEECCSSSHHHHHHHHH-HHTTCEEEE
T ss_pred --------------------------------------------------eEEeeecCCCchHHHHHHHH-HhcCCEEEE
Confidence 0111 24688899999888 445678999
Q ss_pred ecCCccCHHHHHhcccceeecCccchhhhhcccee-ecccc
Q 001087 787 IGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFA-IAQFR 826 (1159)
Q Consensus 787 iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~-i~~f~ 826 (1159)
|||+.||+.|.+.|++++.+.+.+.. ...+.+++ +.++.
T Consensus 151 iGD~~~Di~~a~~aG~~~~~~~~~~~-~~~~~~~~~~~~~~ 190 (206)
T 1rku_A 151 AGDSYNDTTMLSEAHAGILFHAPENV-IREFPQFPAVHTYE 190 (206)
T ss_dssp EECSSTTHHHHHHSSEEEEESCCHHH-HHHCTTSCEECSHH
T ss_pred EeCChhhHHHHHhcCccEEECCcHHH-HHHHhhhccccchH
Confidence 99999999999999999887443332 12344554 44443
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.81 E-value=5.3e-05 Score=79.80 Aligned_cols=41 Identities=12% Similarity=0.178 Sum_probs=35.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.+.+++.+.++.|++.|++++++|+...+.+..+....|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~ 134 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR 134 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcH
Confidence 45799999999999999999999999888777777777663
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=97.78 E-value=2.6e-05 Score=83.29 Aligned_cols=42 Identities=26% Similarity=0.248 Sum_probs=37.7
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.++.+|+.++++.|++.|+++.++|+...+.+..+....|+.
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 144 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLD 144 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGG
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCch
Confidence 457899999999999999999999999998888888888864
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.75 E-value=5.3e-05 Score=80.16 Aligned_cols=121 Identities=17% Similarity=0.197 Sum_probs=82.1
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
-++.+|+.++++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 130 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD---------------------------------- 130 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee----------------------------------
Confidence 4678999999999999999999999998888888888887742110
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecC--hhhHHHHHHHHHhccC---c
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVS--PLQKAQVTSLVKKGAR---K 782 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~s--P~qK~~iV~~lk~~~g---~ 782 (1159)
.++++... +.-|...++.+.+..| .
T Consensus 131 --------------------------------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 160 (226)
T 3mc1_A 131 --------------------------------------------------AIVGSSLDGKLSTKEDVIRYAMESLNIKSD 160 (226)
T ss_dssp --------------------------------------------------EEEEECTTSSSCSHHHHHHHHHHHHTCCGG
T ss_pred --------------------------------------------------eeeccCCCCCCCCCHHHHHHHHHHhCcCcc
Confidence 11222211 1224444433323333 5
Q ss_pred EEEEecCCccCHHHHHhcccce-eec-Cccchhh--hhccceeeccccccchhh
Q 001087 783 ITLSIGDGANDVSMIQAAHIGV-GIS-GQEGMQA--VMASDFAIAQFRFLTDLL 832 (1159)
Q Consensus 783 ~vl~iGDG~NDv~mL~~AdVGI-gis-g~e~~qA--~~asD~~i~~f~~l~~ll 832 (1159)
-+++|||+.||+.|.++|++.. ++. |...... +..+|+++.++.-+..++
T Consensus 161 ~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 161 DAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp GEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 7999999999999999999933 332 3221112 467999999877776654
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.75 E-value=6.9e-05 Score=80.87 Aligned_cols=42 Identities=21% Similarity=0.224 Sum_probs=38.4
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.++.+|+.++++.|++.|++++++|+...+.+..+...+|+.
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 467899999999999999999999999999899999888874
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00012 Score=78.46 Aligned_cols=42 Identities=21% Similarity=0.197 Sum_probs=37.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++.+|+.++++.|++.|++++++|+.....+..+....|+.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDID 150 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcH
Confidence 457899999999999999999999999888888888888874
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.69 E-value=8.2e-05 Score=80.27 Aligned_cols=56 Identities=16% Similarity=0.248 Sum_probs=46.4
Q ss_pred EecChh--hHHHHHHHHHhccCcEEEEecCCccCHHHHHhc--ccceeecCccchhhhhccceeecc
Q 001087 762 CRVSPL--QKAQVTSLVKKGARKITLSIGDGANDVSMIQAA--HIGVGISGQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 762 ~R~sP~--qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~A--dVGIgisg~e~~qA~~asD~~i~~ 824 (1159)
..+.|. .|+.-++.+.+..| |+++|||.||.+||+.| +.||++.. |+..||+++.+
T Consensus 152 lei~~~~~~Kg~al~~l~~~~g--via~GD~~ND~~Ml~~a~~g~~vam~N-----a~~~A~~v~~~ 211 (239)
T 1u02_A 152 IELRVPGVNKGSAIRSVRGERP--AIIAGDDATDEAAFEANDDALTIKVGE-----GETHAKFHVAD 211 (239)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC--EEEEESSHHHHHHHHTTTTSEEEEESS-----SCCCCSEEESS
T ss_pred EEEEcCCCCHHHHHHHHHhhCC--eEEEeCCCccHHHHHHhhCCcEEEECC-----CCCcceEEeCC
Confidence 345565 89999999977778 99999999999999999 99999955 34678887765
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00015 Score=80.41 Aligned_cols=52 Identities=21% Similarity=0.216 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccce
Q 001087 767 LQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDF 820 (1159)
Q Consensus 767 ~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~ 820 (1159)
..|+.-++.+.+..| .-|+++||+.||.+|++.|++||++ .+.+. .+.+||+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~--vk~~A~~ 263 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQR--LKDLHPE 263 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHHHCTT
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHH--HHHhCCC
Confidence 469988888766665 5699999999999999999999999 44444 6778885
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.66 E-value=5.4e-05 Score=80.33 Aligned_cols=42 Identities=24% Similarity=0.156 Sum_probs=37.7
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++.+|+.+.++.|++.|+++.++|+...+.+..+....|+.
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh
Confidence 457899999999999999999999999998888888888874
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00013 Score=75.90 Aligned_cols=41 Identities=10% Similarity=0.083 Sum_probs=37.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|++++++|+...+.+..+....|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 129 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQ 129 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcH
Confidence 57899999999999999999999999998888888888874
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.63 E-value=8.6e-05 Score=78.82 Aligned_cols=42 Identities=26% Similarity=0.281 Sum_probs=37.9
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++.+|+.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 123 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS 123 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH
Confidence 467899999999999999999999999988888888888864
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.62 E-value=9.7e-05 Score=77.71 Aligned_cols=41 Identities=12% Similarity=0.068 Sum_probs=35.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.+.+++.+.++.|++.|++++++|+.....+..+....|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 45799999999999999999999999988888777777764
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=97.60 E-value=7.4e-05 Score=83.68 Aligned_cols=58 Identities=19% Similarity=0.299 Sum_probs=46.8
Q ss_pred hhhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccc
Q 001087 766 PLQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 766 P~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f 825 (1159)
+..|+.-++.+.+..| .-|+++||+.||.+|++.|++||++ .+.+. .+.+||++..+.
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~--~k~~Ad~v~~~~ 287 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKN--VKAAANYQAKSN 287 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHH--HHHHCSEECCCG
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHH--HHHhccEEcCCC
Confidence 3579988887766655 5699999999999999999999999 44444 678899988753
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.59 E-value=6e-05 Score=77.97 Aligned_cols=39 Identities=15% Similarity=0.180 Sum_probs=33.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
.+.+++.++++.|++.|++++++|++...... .....|+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~ 123 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGV 123 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTC
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCc
Confidence 46899999999999999999999999887766 6666665
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00021 Score=77.83 Aligned_cols=56 Identities=25% Similarity=0.378 Sum_probs=44.1
Q ss_pred hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeeccc
Q 001087 768 QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 768 qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f 825 (1159)
.|+.-++.+.+..| .-|+++|||.||.+|++.|++||++. +.+. .+..||++..+.
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~--~k~~A~~v~~~~ 242 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEE--VKRVADFVTKPV 242 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHH--HHHTCSEEECCG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHH--HHHhCCEEeCCC
Confidence 68887777755544 56999999999999999999999983 3333 677899988653
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00016 Score=76.79 Aligned_cols=47 Identities=23% Similarity=0.205 Sum_probs=34.0
Q ss_pred CcEEEEecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccc
Q 001087 781 RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLT 829 (1159)
Q Consensus 781 g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~ 829 (1159)
..-++||||+.||+.|.++|.+++.+-+... ....||+++.++.-+.
T Consensus 163 ~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~--~~~~ad~v~~s~~el~ 209 (233)
T 3nas_A 163 PADCAAIEDAEAGISAIKSAGMFAVGVGQGQ--PMLGADLVVRQTSDLT 209 (233)
T ss_dssp GGGEEEEECSHHHHHHHHHTTCEEEECC---------CSEECSSGGGCC
T ss_pred HHHEEEEeCCHHHHHHHHHcCCEEEEECCcc--ccccCCEEeCChHhCC
Confidence 3679999999999999999999986633322 2238999998877665
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00017 Score=76.59 Aligned_cols=42 Identities=19% Similarity=0.180 Sum_probs=37.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++.+|+.++++.|++.|+++.++|+.....+..+....|+.
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 143 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLT 143 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCch
Confidence 357899999999999999999999999998888888888874
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00017 Score=76.65 Aligned_cols=41 Identities=20% Similarity=0.216 Sum_probs=36.5
Q ss_pred cccCChHHHHHHHHHc-CCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARA-GIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~a-GIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++. |+++.++|+...+.+..+....|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 4789999999999999 9999999999988888887777764
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00015 Score=79.87 Aligned_cols=41 Identities=20% Similarity=0.274 Sum_probs=36.9
Q ss_pred cccCChHHHHHHHHHcCC--eEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGI--KIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGI--kvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+ +++++|+.....+..+....|+.
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~ 184 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIA 184 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCT
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcc
Confidence 567899999999999999 99999999988888888888874
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00067 Score=72.54 Aligned_cols=182 Identities=16% Similarity=0.135 Sum_probs=92.2
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCc-ccchhcccCChHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETN-AIRDVEERGDPVEIARFMREEVK 706 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 706 (1159)
..+.+.+.++++.|+++|+++.+.||-....+..+...+|+-. ..+..++... +..+....... +..+ .+.
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~l----~~~~-~i~ 90 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---PVVAEDGGAISYKKKRIFLASM----DEEW-ILW 90 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEEETTEEEESCCC----SHHH-HHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC---eEEEeCCcEEEeCCEEEEeccH----HHHH-HHH
Confidence 3466788999999999999999999999999999998888632 1221111000 00000000000 1111 111
Q ss_pred HHHHHHHHHhhh-hccccCCCceEEEEc-ccchhHhcchhHHHHHHHHhhcCCce---EEEecCh--hhHHHHHHHHHhc
Q 001087 707 RELNKCIDEAQQ-YIHSISGEKLALIID-GKCLMYALDPSLRVILLNLSLNCSSV---VCCRVSP--LQKAQVTSLVKKG 779 (1159)
Q Consensus 707 ~~~~~~~~~~~~-~~~~~~~~~~~lvi~-G~~l~~~l~~~~~~~~~~l~~~~~~v---I~~R~sP--~qK~~iV~~lk~~ 779 (1159)
+.+......... ....-....+ .+++ +.. .+..+..+..+....+.+ .+..+.| ..|...++.+.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~ 164 (231)
T 1wr8_A 91 NEIRKRFPNARTSYTMPDRRAGL-VIMRETIN-----VETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEF 164 (231)
T ss_dssp HHHHHHCTTCCBCTTGGGCSSCE-EECTTTSC-----HHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHhCCCceEEecCCCceeeE-EEECCCCC-----HHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHH
Confidence 111100000000 0000000011 1222 111 111222222211112211 1123333 4688888777554
Q ss_pred cC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeeccc
Q 001087 780 AR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 780 ~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f 825 (1159)
.| ..++++||+.||.+|++.|++||++. +.+. .+..||+++.+.
T Consensus 165 ~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~~--~~~~a~~v~~~~ 212 (231)
T 1wr8_A 165 LGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKI--LKENADYVTKKE 212 (231)
T ss_dssp HTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHTTCSEECSSC
T ss_pred cCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCHH--HHhhCCEEecCC
Confidence 44 56899999999999999999999883 3333 456789987653
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00024 Score=76.15 Aligned_cols=135 Identities=12% Similarity=0.167 Sum_probs=83.9
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
-++.+|+.++++.|+++|+++.++|+.....+..+.. ||..- ..++.-....
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~------------------------- 127 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASF------------------------- 127 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEEC-------------------------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEE-------------------------
Confidence 3689999999999999999999999999888888877 76443 2222111000
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhc-chhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEE
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYAL-DPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLS 786 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l-~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~ 786 (1159)
.++.+.... .+ ....+.+-.+..|..+++.+ ......++|
T Consensus 128 -------------------------~~~~~~~~~~kp-------------~p~~~~~~~~~~K~~~~~~~-~~~~~~~~~ 168 (236)
T 2fea_A 128 -------------------------DNDYIHIDWPHS-------------CKGTCSNQCGCCKPSVIHEL-SEPNQYIIM 168 (236)
T ss_dssp -------------------------SSSBCEEECTTC-------------CCTTCCSCCSSCHHHHHHHH-CCTTCEEEE
T ss_pred -------------------------cCCceEEecCCC-------------CccccccccCCcHHHHHHHH-hccCCeEEE
Confidence 000000000 00 00001111256788888888 455678999
Q ss_pred ecCCccCHHHHHhcccceeecCccchhhhh--ccceeeccccccch
Q 001087 787 IGDGANDVSMIQAAHIGVGISGQEGMQAVM--ASDFAIAQFRFLTD 830 (1159)
Q Consensus 787 iGDG~NDv~mL~~AdVGIgisg~e~~qA~~--asD~~i~~f~~l~~ 830 (1159)
|||+.||+.|.++|++.+...+.. ..... .+|+++.++.-+..
T Consensus 169 vGDs~~Di~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~ 213 (236)
T 2fea_A 169 IGDSVTDVEAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRK 213 (236)
T ss_dssp EECCGGGHHHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHH
T ss_pred EeCChHHHHHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHH
Confidence 999999999999999887532211 11112 27888877655543
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00041 Score=75.90 Aligned_cols=58 Identities=19% Similarity=0.311 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeecccc
Q 001087 767 LQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFR 826 (1159)
Q Consensus 767 ~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~ 826 (1159)
..|+..++.+.+..| .-++++||+.||.+|++.|++||++ .+.+. .+.+||++..+..
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~--~k~~A~~v~~~~~ 260 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQ--LKDIATSICEDIF 260 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHH--HHHHCSEEECCGG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHH--HHHhhhheeCCCc
Confidence 468887777655544 5699999999999999999999999 44444 6788999987543
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00011 Score=81.40 Aligned_cols=61 Identities=20% Similarity=0.277 Sum_probs=47.0
Q ss_pred ecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeeccc
Q 001087 763 RVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 763 R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f 825 (1159)
.+.|. .|...++.+.+..| ..++++||+.||.+|++.|++||++. +.+. .+..||+++.+.
T Consensus 191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~--~~~~a~~v~~~~ 257 (282)
T 1rkq_A 191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPS--VKEVANFVTKSN 257 (282)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHHHCSEECCCT
T ss_pred EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHH--HHhhCCEEecCC
Confidence 45554 89998888765544 46999999999999999999999984 3343 456799988653
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00027 Score=74.75 Aligned_cols=42 Identities=19% Similarity=0.243 Sum_probs=37.3
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++.+|+.++++.|++.|+++.++|+...+.+..+...+|+.
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 136 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLT 136 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCG
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 467899999999999999999999999988888888877774
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0013 Score=71.67 Aligned_cols=54 Identities=15% Similarity=0.262 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHhccC-----cEEEEecCCccCHHHHHhcccceeecCccchhhhhccceeecc
Q 001087 767 LQKAQVTSLVKKGAR-----KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 767 ~qK~~iV~~lk~~~g-----~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~ 824 (1159)
..|...++.+.+..| ..++++||+.||.+|++.|++||++...... +++++...
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~----~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDPP----EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCCC----TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhhc----CCcEEeCC
Confidence 689998888866665 6799999999999999999999999554431 56776654
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00016 Score=75.89 Aligned_cols=47 Identities=9% Similarity=0.025 Sum_probs=36.1
Q ss_pred CcEEEEecCCccCHHHHHhcccceeecCccchhhhhccceeeccccccc
Q 001087 781 RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLT 829 (1159)
Q Consensus 781 g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l~ 829 (1159)
..-++++||+.||+.|++.|.+++.+.+... ....||+++.+..-+.
T Consensus 162 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~--~~~~a~~v~~~~~el~ 208 (221)
T 2wf7_A 162 PSESIGLEDSQAGIQAIKDSGALPIGVGRPE--DLGDDIVIVPDTSHYT 208 (221)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESCHH--HHCSSSEEESSGGGCC
T ss_pred hhHeEEEeCCHHHHHHHHHCCCEEEEECCHH--HhccccchhcCHHhCC
Confidence 3568999999999999999999997644322 2238999998766654
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00014 Score=75.90 Aligned_cols=41 Identities=12% Similarity=0.216 Sum_probs=35.9
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++.+|+.++++.|++. +++.++|+.....+..+...+|+.
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~ 122 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFM 122 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGG
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChH
Confidence 35789999999999999 999999999988888888777763
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00054 Score=72.29 Aligned_cols=41 Identities=27% Similarity=0.275 Sum_probs=35.4
Q ss_pred cccCChHHHHHHHHHcC-CeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAG-IKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aG-IkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.+.++.|++.| +++.++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~ 146 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLS 146 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCG
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcH
Confidence 57899999999999999 999999988887777777777763
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00068 Score=72.58 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=36.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+.....+..+....|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 47799999999999999999999998888888888888864
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00077 Score=71.51 Aligned_cols=122 Identities=16% Similarity=0.130 Sum_probs=80.0
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
-++.+|+.++++.|++. +++.++|+...+.+..+....|+..--. .
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~-~-------------------------------- 147 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFK-D-------------------------------- 147 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCS-E--------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhh-e--------------------------------
Confidence 35789999999999999 9999999998888888877777743110 0
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC----cE
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR----KI 783 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g----~~ 783 (1159)
++.+.... ..+-|....+.+.+..| .-
T Consensus 148 -----------------------~~~~~~~~--------------------------~~kp~~~~~~~~~~~~g~~~~~~ 178 (238)
T 3ed5_A 148 -----------------------IFVSEDTG--------------------------FQKPMKEYFNYVFERIPQFSAEH 178 (238)
T ss_dssp -----------------------EEEGGGTT--------------------------SCTTCHHHHHHHHHTSTTCCGGG
T ss_pred -----------------------EEEecccC--------------------------CCCCChHHHHHHHHHcCCCChhH
Confidence 11110000 01112233333323444 57
Q ss_pred EEEecCCc-cCHHHHHhcccc-eee-cCccchhhhhccceeeccccccchhh
Q 001087 784 TLSIGDGA-NDVSMIQAAHIG-VGI-SGQEGMQAVMASDFAIAQFRFLTDLL 832 (1159)
Q Consensus 784 vl~iGDG~-NDv~mL~~AdVG-Igi-sg~e~~qA~~asD~~i~~f~~l~~ll 832 (1159)
+++|||+. ||+.|.+.|+++ |++ .|.........+|+++.++.-+..++
T Consensus 179 ~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 179 TLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp EEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred eEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 99999998 999999999995 455 33212124457899999887776653
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00066 Score=71.80 Aligned_cols=41 Identities=15% Similarity=0.130 Sum_probs=35.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCc---HhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDK---METAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~---~eTAi~Ia~~~gl~ 669 (1159)
.+.+++.++++.|++.|+++.++|+.. ...+..+....|+.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~ 142 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLM 142 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcH
Confidence 458999999999999999999999998 77777777777764
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00034 Score=75.39 Aligned_cols=51 Identities=18% Similarity=0.194 Sum_probs=37.5
Q ss_pred cEEEEecCCccCHHHHHhcccce-ee-cCccchhhhhccceeeccccccchhh
Q 001087 782 KITLSIGDGANDVSMIQAAHIGV-GI-SGQEGMQAVMASDFAIAQFRFLTDLL 832 (1159)
Q Consensus 782 ~~vl~iGDG~NDv~mL~~AdVGI-gi-sg~e~~qA~~asD~~i~~f~~l~~ll 832 (1159)
.-+++|||+.||+.|.++|++++ ++ .|.........||+++.++.-+...+
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHH
Confidence 67999999999999999999654 33 22212225678999999887775553
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00029 Score=76.73 Aligned_cols=40 Identities=33% Similarity=0.288 Sum_probs=34.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++.+++.++++.|++.|+++.++|++..+.+..+....|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 5679999999999999999999999988877777666655
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00026 Score=76.76 Aligned_cols=42 Identities=14% Similarity=0.097 Sum_probs=37.2
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
.-++.+|+.++++.|++.|++++++|+.....+..+....|+
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 149 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGL 149 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcCh
Confidence 345789999999999999999999999998888888887776
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00021 Score=79.94 Aligned_cols=59 Identities=19% Similarity=0.296 Sum_probs=46.2
Q ss_pred ecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeecC-ccchhhhhccceeec
Q 001087 763 RVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISG-QEGMQAVMASDFAIA 823 (1159)
Q Consensus 763 R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~asD~~i~ 823 (1159)
.+.|. .|+..++.+.+..| ..|+++||+.||.+|++.|++||++.. .+. .+..||+++.
T Consensus 217 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~--~k~~a~~v~~ 281 (301)
T 2b30_A 217 EVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDS--AKSHAKCVLP 281 (301)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHH--HHHHSSEECS
T ss_pred EecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHH--HHhhCCEEEc
Confidence 34454 89998888866554 468999999999999999999999843 333 5568999886
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00049 Score=72.95 Aligned_cols=42 Identities=7% Similarity=0.029 Sum_probs=37.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++.+|+.++++.|++.|+++.++|+...+.+..+...+|+.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 139 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMS 139 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCT
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcH
Confidence 467899999999999999999999999998888888888874
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00071 Score=72.55 Aligned_cols=40 Identities=15% Similarity=0.154 Sum_probs=35.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++.+|+.++++.|++.|+++.++|+...+.+..+-..+|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999888877777777776
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00089 Score=68.22 Aligned_cols=53 Identities=13% Similarity=0.118 Sum_probs=36.1
Q ss_pred CcEEEEecCCccCHHHHHhcccc-eee-cCccchhh----hhccceeeccccccchhhh
Q 001087 781 RKITLSIGDGANDVSMIQAAHIG-VGI-SGQEGMQA----VMASDFAIAQFRFLTDLLL 833 (1159)
Q Consensus 781 g~~vl~iGDG~NDv~mL~~AdVG-Igi-sg~e~~qA----~~asD~~i~~f~~l~~lll 833 (1159)
...++||||+.||+.|.++|.+. |++ .|...... ...+|+++.++.-+..+++
T Consensus 118 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 118 LAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp CTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred HHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 45699999999999999999863 344 33222111 1457999988776655543
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00065 Score=74.04 Aligned_cols=41 Identities=22% Similarity=0.121 Sum_probs=36.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+...+.+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 57899999999999999999999999988888887777764
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.011 Score=65.09 Aligned_cols=56 Identities=29% Similarity=0.315 Sum_probs=44.0
Q ss_pred hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeeccc
Q 001087 768 QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 768 qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f 825 (1159)
.|+..++.+.+..| ..++++||+.||.+|++.|++||++. +.+. .+..||+++.+.
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~--~~~~a~~v~~~~ 275 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARED--IKSIADAVTLTN 275 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHH--HHHHCSEECCCG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHH--HHhhCceeecCC
Confidence 78888877765554 46999999999999999999999984 3333 456799987653
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0016 Score=69.43 Aligned_cols=41 Identities=20% Similarity=0.150 Sum_probs=37.3
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57899999999999999999999999988888888888874
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00092 Score=73.20 Aligned_cols=61 Identities=21% Similarity=0.314 Sum_probs=46.2
Q ss_pred ecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeecC-ccchhhhhccceeeccc
Q 001087 763 RVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISG-QEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 763 R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~asD~~i~~f 825 (1159)
.+.|. .|...++.+.+..| .-++++||+.||.+|++.|++||++.. .+. .+..||+++.+.
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~--~~~~a~~v~~~~ 249 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEK--VKEASDIVTLTN 249 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHH--HHHHCSEECCCT
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHH--HHhhCCEEEccC
Confidence 44554 89988888755444 568999999999999999999998843 332 456799988653
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0019 Score=68.31 Aligned_cols=40 Identities=18% Similarity=0.211 Sum_probs=35.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+++.++++.|++. +++.++|+.....+..+....|+.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~ 139 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIK 139 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcH
Confidence 4679999999999999 999999999998888888887774
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0017 Score=68.05 Aligned_cols=40 Identities=18% Similarity=0.242 Sum_probs=35.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++ |+++.++|+...+.+..+-..+|+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~ 123 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIH 123 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCch
Confidence 578999999999999 9999999998888887777777874
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0011 Score=68.14 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=37.6
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCc-HhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDK-METAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~-~eTAi~Ia~~~gl~ 669 (1159)
-++.+|+.++++.|++.|+++.++||.. ...+..+....|+.
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 3678999999999999999999999998 68888888888874
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00059 Score=73.09 Aligned_cols=40 Identities=15% Similarity=0.183 Sum_probs=33.0
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
-++.+|+.++++.|++.|+++.++|+.....+...... |+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 147 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NF 147 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hH
Confidence 46789999999999999999999999877666555554 55
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0017 Score=68.74 Aligned_cols=41 Identities=20% Similarity=0.291 Sum_probs=37.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH
Confidence 57899999999999999999999999988888888888874
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0024 Score=67.59 Aligned_cols=40 Identities=15% Similarity=0.142 Sum_probs=35.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|+ .|+++.++|+...+.+..+-..+|+.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~ 146 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVD 146 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChH
Confidence 57899999999999 99999999999888888777777764
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.00085 Score=71.69 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=31.5
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
..++.+|+.++++.|++.|+++.++|+.....+...... |+
T Consensus 106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 146 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NF 146 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HS
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hH
Confidence 346789999999999999999999999877666555555 55
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0079 Score=65.98 Aligned_cols=41 Identities=7% Similarity=0.067 Sum_probs=36.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.+-+.+.++|++|+++|+++.+.||-....+..+...+++-
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 34567899999999999999999999999999999998863
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.003 Score=66.42 Aligned_cols=28 Identities=21% Similarity=0.394 Sum_probs=26.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKM 656 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~ 656 (1159)
++.+|+.++++.|+++|+++.++|+...
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~ 77 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSG 77 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTH
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCC
Confidence 7889999999999999999999999884
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.71 E-value=0.00095 Score=72.86 Aligned_cols=59 Identities=32% Similarity=0.427 Sum_probs=47.2
Q ss_pred hhhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeecccc
Q 001087 766 PLQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFR 826 (1159)
Q Consensus 766 P~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~ 826 (1159)
+..|+.-++.+.+..| .-|+++|||.||.+|++.|++||++ .+.+. ++.+||++..+..
T Consensus 192 ~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~--~k~~Ad~v~~~~~ 254 (268)
T 3r4c_A 192 GTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEK--VQSVADFVTDTVD 254 (268)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHHTCSEECCCTT
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHH--HHHhcCEeeCCCC
Confidence 4578888877766655 4699999999999999999999999 44444 6788999987543
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0023 Score=65.29 Aligned_cols=38 Identities=18% Similarity=0.336 Sum_probs=31.4
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
+.+++.++++.|++.|++++++|+... .+..+....|+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 679999999999999999999998764 45556666665
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0014 Score=72.58 Aligned_cols=65 Identities=17% Similarity=0.217 Sum_probs=46.8
Q ss_pred EEEecCh--hhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeecccc
Q 001087 760 VCCRVSP--LQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFR 826 (1159)
Q Consensus 760 I~~R~sP--~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f~ 826 (1159)
.+..+.| ..|...++.+.+..| ..++++||+.||.+|++.|++||++. +.+. .+..||+++....
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~--~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQE--AKNLHNLITDSEY 271 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHH--HHHHCCCBCSSCH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHH--HHHhCCEEcCCCC
Confidence 3444444 367777766655544 46999999999999999999999983 3333 5567898876543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0016 Score=68.53 Aligned_cols=38 Identities=13% Similarity=0.130 Sum_probs=31.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+++.+.++.|+. +++++|+...+.+..+....|+.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~ 124 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLK 124 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCG
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChH
Confidence 467888888888764 99999999988888888877764
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.002 Score=66.72 Aligned_cols=40 Identities=10% Similarity=0.161 Sum_probs=35.3
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
-++.+|+.+ ++.|++. +++.++|+...+.+..+...+|+.
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 112 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLL 112 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcH
Confidence 367899999 9999999 999999999988888888888874
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0022 Score=70.30 Aligned_cols=40 Identities=15% Similarity=-0.051 Sum_probs=35.2
Q ss_pred cccCChHHHHHHHHHc-CCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARA-GIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~a-GIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
.+.+|+.+.++.|++. |+++.++|+...+.+..+....|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4679999999999999 999999999998888777777776
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.002 Score=68.93 Aligned_cols=39 Identities=8% Similarity=0.052 Sum_probs=34.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++.+++.++++.|++. +++.++|+...+.+..+...+|+
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~ 154 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGI 154 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTC
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCC
Confidence 5689999999999997 99999999998888888888777
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0059 Score=65.79 Aligned_cols=39 Identities=15% Similarity=0.212 Sum_probs=35.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|+ |+++.++|+.....+..+....|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999998888888888874
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.013 Score=62.95 Aligned_cols=39 Identities=15% Similarity=0.200 Sum_probs=33.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
++.+|+.++++.|+ .|+++.++|+.....+.......|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l 150 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGL 150 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCc
Confidence 56899999999999 9999999999887777766666665
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.004 Score=65.80 Aligned_cols=36 Identities=8% Similarity=-0.027 Sum_probs=30.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 665 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~ 665 (1159)
++.+|+.++++.|++ |+++.++|+.....+..+...
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~ 134 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK 134 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh
Confidence 678999999999999 899999999887766655544
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0023 Score=67.57 Aligned_cols=29 Identities=31% Similarity=0.310 Sum_probs=26.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKM 656 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~ 656 (1159)
.++.+|+.++++.|+++|+++.++|+-..
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCC
Confidence 46789999999999999999999999876
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.02 Score=58.81 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=36.7
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcH---hHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKM---ETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~---eTAi~Ia~~~gl~ 669 (1159)
-++.+|+.++++.|+++|+++.++|+-.. +.+..+....|+.
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 36889999999999999999999998765 7888888888874
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0049 Score=66.99 Aligned_cols=40 Identities=13% Similarity=0.172 Sum_probs=33.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.|+++.++|+.... +..+-..+|+.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~ 145 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLR 145 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCG
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcH
Confidence 57899999999999999999999986654 56667777763
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0028 Score=67.95 Aligned_cols=40 Identities=13% Similarity=0.095 Sum_probs=34.5
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+++.++++.|++. +++.++|+...+.+..+...+|+.
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~ 159 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP 159 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC
Confidence 5679999999999985 999999999888888888877773
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0022 Score=69.41 Aligned_cols=58 Identities=14% Similarity=0.119 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHhc----cCcEEEEecCCccCHHHHHhcccceeecCccchhhhhccceeecc
Q 001087 767 LQKAQVTSLVKKG----ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 767 ~qK~~iV~~lk~~----~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~ 824 (1159)
-.|+.-++.+.+. ...-|+++|||.||.+|++.|++||++........+..||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4688777776544 346799999999999999999999999443211134468887654
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.011 Score=62.00 Aligned_cols=51 Identities=18% Similarity=0.204 Sum_probs=36.6
Q ss_pred CcEEEEecCCc-cCHHHHHhcccceee--cCccchhhhhccceeeccccccchh
Q 001087 781 RKITLSIGDGA-NDVSMIQAAHIGVGI--SGQEGMQAVMASDFAIAQFRFLTDL 831 (1159)
Q Consensus 781 g~~vl~iGDG~-NDv~mL~~AdVGIgi--sg~e~~qA~~asD~~i~~f~~l~~l 831 (1159)
...+++|||+. ||+.|.++|.+++.. .|.........+|+++.++.-+..+
T Consensus 172 ~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~ 225 (230)
T 3vay_A 172 ASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEV 225 (230)
T ss_dssp GGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHH
T ss_pred chheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHH
Confidence 36699999998 999999999998743 2222211245789999887766544
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.081 Score=56.87 Aligned_cols=40 Identities=13% Similarity=0.116 Sum_probs=34.8
Q ss_pred ccCChHHHHHHHHHcCCeEEEEe---CCcHhHHHHHHHHcCcc
Q 001087 630 LQEGVPACIETLARAGIKIWVLT---GDKMETAINIAYACNLI 669 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLT---GD~~eTAi~Ia~~~gl~ 669 (1159)
+-++..++++.+++.|+++.++| |-............|+-
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66888999999999999999999 88888888777777764
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=95.60 E-value=0.022 Score=61.73 Aligned_cols=40 Identities=23% Similarity=0.329 Sum_probs=35.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++ |+++.++|+.....+..+...+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 577999999999998 6999999999988888888888874
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.015 Score=59.75 Aligned_cols=40 Identities=13% Similarity=0.062 Sum_probs=35.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 36799999999999999 99999999888888887777764
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=95.54 E-value=0.025 Score=60.91 Aligned_cols=41 Identities=22% Similarity=0.312 Sum_probs=34.6
Q ss_pred hHHHHHHHHHhccCcEEEEecC----CccCHHHHHhcc-cceeecCc
Q 001087 768 QKAQVTSLVKKGARKITLSIGD----GANDVSMIQAAH-IGVGISGQ 809 (1159)
Q Consensus 768 qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~Ad-VGIgisg~ 809 (1159)
.|+.-++.+.+ .-.-|+++|| |.||.+||+.|. +|+|+.+.
T Consensus 187 ~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~ 232 (246)
T 3f9r_A 187 DKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSY 232 (246)
T ss_dssp SGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSH
T ss_pred CHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCH
Confidence 89988888755 6678999999 799999999995 89988553
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=95.54 E-value=0.0072 Score=66.07 Aligned_cols=58 Identities=24% Similarity=0.288 Sum_probs=44.9
Q ss_pred hhhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeecC-ccchhhhhccceeeccc
Q 001087 766 PLQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISG-QEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 766 P~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~asD~~i~~f 825 (1159)
...|...++.+.+..| ..++++||+.||.+|++.|++||++.. .+. .+..||+++.+.
T Consensus 189 ~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~--~k~~a~~v~~~~ 250 (271)
T 1rlm_A 189 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAEN--IKQIARYATDDN 250 (271)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHH--HHHHCSEECCCG
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHH--HHHhCCeeCcCC
Confidence 3478888877755544 469999999999999999999999843 333 567899988653
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=95.35 E-value=0.0051 Score=59.02 Aligned_cols=41 Identities=12% Similarity=0.068 Sum_probs=34.8
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
.++.+|+.++++.|++.|+++.++|+.....+..+...+|+
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 45778999999999999999999999888877766666665
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=95.08 E-value=0.011 Score=63.58 Aligned_cols=56 Identities=20% Similarity=0.284 Sum_probs=41.9
Q ss_pred hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhc-------cceeeccc
Q 001087 768 QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMA-------SDFAIAQF 825 (1159)
Q Consensus 768 qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~a-------sD~~i~~f 825 (1159)
.|...++.+.+..| ..|+++||+.||.+|++.|++||++. +.+. .+.. ||++..+.
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~--~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPE--LLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHH--HHHHHHHHCCTTEEECSSC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHH--HHHHHhcccccceeecCCc
Confidence 68887877765554 46899999999999999999999983 3333 3332 78887643
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=95.05 E-value=0.013 Score=60.80 Aligned_cols=36 Identities=8% Similarity=0.082 Sum_probs=30.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 665 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~ 665 (1159)
++.+++.++++.|++ |+++.++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 567899999999999 999999999877766665554
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=95.02 E-value=0.015 Score=63.04 Aligned_cols=60 Identities=28% Similarity=0.384 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeecCccchhhhhccceeeccccc
Q 001087 767 LQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 827 (1159)
Q Consensus 767 ~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~ 827 (1159)
..|...++.+.+..| .-++++||+.||.+|++.|++||++..... ..+..||+++.+..-
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~~~~ 248 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKE-DVKAAADYVTAPIDE 248 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCCGGG
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccH-HHHhhCCEEeccCch
Confidence 467777766655444 568999999999999999999998843221 245779998876443
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.01 E-value=0.19 Score=54.23 Aligned_cols=45 Identities=11% Similarity=0.009 Sum_probs=35.8
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeC---CcHhHHHHHHHHcCcccc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTG---DKMETAINIAYACNLINN 671 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTG---D~~eTAi~Ia~~~gl~~~ 671 (1159)
.+++-+++.++|+.|+++|+++.++|| -...........+|+...
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 455667899999999999999999999 556666666677887543
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.067 Score=55.32 Aligned_cols=34 Identities=12% Similarity=0.168 Sum_probs=29.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINI 662 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~I 662 (1159)
++-+|+.++++.|+++|+++.++||-....+..+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~ 69 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPL 69 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh
Confidence 6789999999999999999999999877766443
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=94.70 E-value=0.14 Score=55.26 Aligned_cols=43 Identities=12% Similarity=0.122 Sum_probs=34.0
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeC---CcHhHHHHHHHHcCccc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTG---DKMETAINIAYACNLIN 670 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTG---D~~eTAi~Ia~~~gl~~ 670 (1159)
+++-+++.++|+.|+++|+++.++|| -...........+|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44456799999999999999999999 55566666677788753
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=94.69 E-value=0.22 Score=53.72 Aligned_cols=40 Identities=20% Similarity=0.190 Sum_probs=34.7
Q ss_pred CChHHHHHHHHHcCCeEEEEe---CCcHhHHHHHHHHcCcccc
Q 001087 632 EGVPACIETLARAGIKIWVLT---GDKMETAINIAYACNLINN 671 (1159)
Q Consensus 632 ~~v~etI~~L~~aGIkvwmLT---GD~~eTAi~Ia~~~gl~~~ 671 (1159)
+++.++|+.++++|++++++| |-..........++|+...
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 899999999999999999999 7777777788888888543
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=94.68 E-value=0.035 Score=63.73 Aligned_cols=42 Identities=17% Similarity=0.213 Sum_probs=37.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 670 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~ 670 (1159)
++.||+.++++.|+++|+++.++|+-....+..+-...||..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 678899999999999999999999999988888888888753
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=94.63 E-value=0.0044 Score=64.11 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=26.3
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMET 658 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eT 658 (1159)
++.+|+.++++.|++.|++++++|+.....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 578999999999999999999999865443
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=94.22 E-value=0.11 Score=53.88 Aligned_cols=42 Identities=21% Similarity=0.206 Sum_probs=38.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 670 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~ 670 (1159)
++.+|+.++++.|++.|+++.++|+-..+.+..+-...|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999988888853
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=94.20 E-value=0.41 Score=51.57 Aligned_cols=42 Identities=17% Similarity=0.124 Sum_probs=36.5
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEe---CCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLT---GDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLT---GD~~eTAi~Ia~~~gl~ 669 (1159)
+++-+++.++|+.|++.|+++.++| |-...........+|+-
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 6677899999999999999999999 77777777778888874
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=94.10 E-value=0.085 Score=56.55 Aligned_cols=46 Identities=17% Similarity=0.358 Sum_probs=35.5
Q ss_pred CcEEEEecCCccCHHHHHhccc-ceeecCccchhhhhccceeeccccccc
Q 001087 781 RKITLSIGDGANDVSMIQAAHI-GVGISGQEGMQAVMASDFAIAQFRFLT 829 (1159)
Q Consensus 781 g~~vl~iGDG~NDv~mL~~AdV-GIgisg~e~~qA~~asD~~i~~f~~l~ 829 (1159)
..-+++|||..+|+.+=++|.+ .||+...+. ...||+++.++.-+.
T Consensus 187 p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 187 PQNCIGIEDASAGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQLK 233 (250)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGCC
T ss_pred hHHeEEECCCHHHHHHHHHcCCEEEEECChhH---hccCCEEECChHhCC
Confidence 3568999999999999999987 457755443 346899998877664
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=94.02 E-value=0.79 Score=46.65 Aligned_cols=53 Identities=17% Similarity=0.165 Sum_probs=36.0
Q ss_pred EEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 001087 535 LYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELI 614 (1159)
Q Consensus 535 l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~i 614 (1159)
.+.-|....|.+.-- ...+.....++++..+|..++.+|.
T Consensus 133 ~v~iGn~~~m~~~gi----~i~~~~~~~~~~~~~~G~T~V~vai------------------------------------ 172 (185)
T 2kmv_A 133 KVLIGNREWMIRNGL----VINNDVNDFMTEHERKGRTAVLVAV------------------------------------ 172 (185)
T ss_dssp EEEEECHHHHHHHTC----CCCHHHHHHHHHHHHTTCEEEEEEE------------------------------------
T ss_pred EEEECCHHHHHHcCC----CCCHHHHHHHHHHHhCCCeEEEEEE------------------------------------
Confidence 344599887654211 1123344556777888998888884
Q ss_pred hcCcEEEEEeeeccc
Q 001087 615 EKDLTLIGCTAIEDK 629 (1159)
Q Consensus 615 E~dl~llG~~~ieD~ 629 (1159)
|-.++|++++.|+
T Consensus 173 --dg~l~g~iavaD~ 185 (185)
T 2kmv_A 173 --DDELCGLIAIADT 185 (185)
T ss_dssp --TTEEEEEEEEECC
T ss_pred --CCEEEEEEEEEcC
Confidence 5679999999995
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=93.68 E-value=0.039 Score=58.41 Aligned_cols=61 Identities=11% Similarity=0.128 Sum_probs=39.8
Q ss_pred hHHHHHHHHHhccC---cEEEEecCC-ccCHHHHHhcccce-ee-cCccchh-hh---hccceeecccccc
Q 001087 768 QKAQVTSLVKKGAR---KITLSIGDG-ANDVSMIQAAHIGV-GI-SGQEGMQ-AV---MASDFAIAQFRFL 828 (1159)
Q Consensus 768 qK~~iV~~lk~~~g---~~vl~iGDG-~NDv~mL~~AdVGI-gi-sg~e~~q-A~---~asD~~i~~f~~l 828 (1159)
.|...++.+.+..| .-++||||+ .||+.|++.|.+++ ++ .|....+ .. ..+|+++.+..-+
T Consensus 177 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el 247 (250)
T 2c4n_A 177 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred CCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHh
Confidence 35555555534443 679999999 79999999999996 34 3322211 11 3689988775443
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=93.50 E-value=0.096 Score=58.69 Aligned_cols=43 Identities=16% Similarity=0.218 Sum_probs=38.7
Q ss_pred eeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHc
Q 001087 624 TAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 666 (1159)
Q Consensus 624 ~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~ 666 (1159)
..+...+.++..+.++.|+++|++||++||=..+.+..+|...
T Consensus 138 ~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 138 DVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred cccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 3445578899999999999999999999999999999999875
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=93.44 E-value=0.037 Score=56.14 Aligned_cols=41 Identities=20% Similarity=0.275 Sum_probs=33.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCC---------------cHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGD---------------KMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD---------------~~eTAi~Ia~~~gl~ 669 (1159)
++.||+.++++.|++.|+++.++|+- ..+.+..+....|+.
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 57899999999999999999999997 355666666677763
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=93.42 E-value=0.14 Score=55.14 Aligned_cols=43 Identities=5% Similarity=0.076 Sum_probs=34.5
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcH----hHHHHHHHHcCcc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKM----ETAINIAYACNLI 669 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~----eTAi~Ia~~~gl~ 669 (1159)
+.++-||+.+.++.|+++|+++.++||-.. +.+..-.++.||-
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 478899999999999999999999999754 3455555566763
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=93.27 E-value=0.024 Score=61.61 Aligned_cols=55 Identities=13% Similarity=0.253 Sum_probs=40.4
Q ss_pred hHHHHHHHHHhccCcEEEEecC----CccCHHHHHhcc-cceeecC-ccchhhhhccceeecc
Q 001087 768 QKAQVTSLVKKGARKITLSIGD----GANDVSMIQAAH-IGVGISG-QEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 768 qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~Ad-VGIgisg-~e~~qA~~asD~~i~~ 824 (1159)
.|+.-++.+..-...-|+++|| |.||.+||+.|+ +|+|+.. .+. .+..||++...
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~--~k~~a~~v~~~ 257 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT--VQRCREIFFPE 257 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH--HHHHHHHHCTT
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHH--HHHhhheeCCC
Confidence 6877777771223467999999 999999999998 5999933 233 56678887643
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=92.87 E-value=0.11 Score=54.27 Aligned_cols=40 Identities=15% Similarity=0.160 Sum_probs=33.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|+.++++.|+++|+++.++|+.... +..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcH
Confidence 57899999999999999999999997664 66677777763
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=92.57 E-value=0.39 Score=50.46 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=34.9
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl 668 (1159)
-++.+|+.++++.|++.| ++.++|+-....+..+....|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 468999999999999999 9999999888877777777766
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=92.27 E-value=0.18 Score=54.57 Aligned_cols=43 Identities=14% Similarity=0.181 Sum_probs=32.7
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhH---HHHHHHHcCcc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMET---AINIAYACNLI 669 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eT---Ai~Ia~~~gl~ 669 (1159)
+.++-+|+.++|+.|++.|+++.++||-.... ....-..+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 35788999999999999999999999976433 33333455653
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=91.99 E-value=0.1 Score=54.86 Aligned_cols=34 Identities=6% Similarity=-0.014 Sum_probs=29.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIA 663 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia 663 (1159)
++.+|+.++++.|++. +++.++|+.....+..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHH
Confidence 3668999999999999 999999999888777655
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=91.86 E-value=0.18 Score=55.63 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=28.3
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhH
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMET 658 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eT 658 (1159)
++++.+|+.++++.|+++|+++.++||-....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 56789999999999999999999999976543
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=91.80 E-value=0.031 Score=59.95 Aligned_cols=53 Identities=19% Similarity=0.263 Sum_probs=35.3
Q ss_pred hHHHHHHHHHhccCcEEEEecC----CccCHHHHHhccc-ceeecCccchhhhhcccee
Q 001087 768 QKAQVTSLVKKGARKITLSIGD----GANDVSMIQAAHI-GVGISGQEGMQAVMASDFA 821 (1159)
Q Consensus 768 qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~AdV-GIgisg~e~~qA~~asD~~ 821 (1159)
.|+.-++.+..-...-|+++|| |.||.+||+.|+. |+|+...... .+..||++
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~-vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDT-RRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHH-HHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHH-HHHHHhhc
Confidence 5666555551223468999999 9999999999976 9998543221 56677765
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=91.77 E-value=2.4 Score=44.81 Aligned_cols=43 Identities=12% Similarity=0.184 Sum_probs=29.8
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEe---CCcHhHHHHHHHHcCcc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLT---GDKMETAINIAYACNLI 669 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLT---GD~~eTAi~Ia~~~gl~ 669 (1159)
.+++-+++.++++.|++.|++++++| |-........-...|+-
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 45555788999999999999999999 44444444444556663
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=91.66 E-value=0.2 Score=53.91 Aligned_cols=43 Identities=12% Similarity=0.069 Sum_probs=34.0
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcH----hHHHHHHHHcCcc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKM----ETAINIAYACNLI 669 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~----eTAi~Ia~~~gl~ 669 (1159)
++++-||+.+.++.|+++|+++.++||-.. +.+..-....||-
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 578899999999999999999999998654 3444445556664
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=91.13 E-value=1.5 Score=48.27 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=34.1
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeC---CcHhHHHHHHHHcCcc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTG---DKMETAINIAYACNLI 669 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTG---D~~eTAi~Ia~~~gl~ 669 (1159)
.+++-+++.++|+.|++.|+++.++|| -.........+..|+-
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 567788999999999999999999994 5555555555666663
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=90.05 E-value=0.88 Score=48.98 Aligned_cols=37 Identities=14% Similarity=0.268 Sum_probs=32.1
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAY 664 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~ 664 (1159)
-++.+|+.++++.|+++|+++.++|+-....+..+-.
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~ 165 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFG 165 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHH
Confidence 4688999999999999999999999988877666544
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=85.31 E-value=7.4 Score=41.44 Aligned_cols=42 Identities=24% Similarity=0.240 Sum_probs=34.1
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHH---cCc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA---CNL 668 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~---~gl 668 (1159)
.+.+-+++.++|+.|+++|+++.++||-...+...++.. +|+
T Consensus 15 ~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~ 59 (263)
T 1zjj_A 15 GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGI 59 (263)
T ss_dssp TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 344458999999999999999999999987777776665 465
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=84.59 E-value=6.2 Score=41.91 Aligned_cols=42 Identities=10% Similarity=0.142 Sum_probs=33.7
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHH----cCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA----CNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~----~gl~ 669 (1159)
++.-+++.++++.|++.|+++.++||-...+...++.. .|+-
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 44446888999999999999999999987777776664 7764
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=84.25 E-value=1.4 Score=51.03 Aligned_cols=26 Identities=27% Similarity=0.456 Sum_probs=24.3
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCc
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDK 655 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~ 655 (1159)
+-+|+.++++.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999955
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=82.02 E-value=2.2 Score=45.03 Aligned_cols=40 Identities=18% Similarity=0.142 Sum_probs=31.6
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.++.+|+.++++.|++.|+++.++|+... +..+-...|+.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~ 133 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELR 133 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhc
Confidence 46789999999999999999999997543 44455666764
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=81.64 E-value=0.72 Score=48.03 Aligned_cols=28 Identities=25% Similarity=0.284 Sum_probs=24.8
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCcHh
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDKME 657 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~~e 657 (1159)
+.+++.++++.|+++|+++.++||-...
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~ 116 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPT 116 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 5679999999999999999999997644
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=80.30 E-value=0.48 Score=52.14 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=26.1
Q ss_pred CCCCccccCCcccccc---------cCceEEEecCCCCCCCCc
Q 001087 333 SNTPASARTSNLNEEL---------GQVEYIFSDKTGTLTRNL 366 (1159)
Q Consensus 333 ~~~~~~~r~~~~~E~L---------G~V~~I~sDKTGTLT~n~ 366 (1159)
.+.++++|++..+|++ .++. |+||||||||+..
T Consensus 17 ~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~ 58 (297)
T 4fe3_A 17 QKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFS 58 (297)
T ss_dssp TSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSE
T ss_pred hcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeec
Confidence 6788999999998873 3333 6779999999864
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1159 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 8e-30 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-21 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 4e-14 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-08 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 5e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-04 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 7e-04 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 0.001 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 116 bits (292), Expect = 8e-30
Identities = 41/231 (17%), Positives = 71/231 (30%), Gaps = 35/231 (15%)
Query: 412 GFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALV 471
+ + L D E A+C+ + +E+ + + + E AL
Sbjct: 28 TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNET-KGVYEKVGEATETALT 86
Query: 472 TAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADG 531
T + F R + + + + LEF+ RK SV C A
Sbjct: 87 TLVEKMNVFNTEVRNLSKVERANACNSVIRQL---MKKEFTLEFSRDRKSMSVYCSPAKS 143
Query: 532 -----RLVLYCKGADSVIYERLANG---------NEDLKKVTREHLEQFGSS--GLRTLC 575
++ KGA + +R +K+ ++++G+ LR L
Sbjct: 144 SRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLA 203
Query: 576 LAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAI 626
LA RD P E + E DLT +G +
Sbjct: 204 LATRDTPPKREEMVLDD---------------SSRFMEYETDLTFVGVVGM 239
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 92.6 bits (229), Expect = 1e-21
Identities = 31/214 (14%), Positives = 61/214 (28%), Gaps = 46/214 (21%)
Query: 428 EHNPDACKEFFRCLAICHTVLPEGDESPERITYQAA--SPDEAALVTAAKNFGFFFYRRT 485
+ R +C+ + + + ++ + E+AL+ +
Sbjct: 28 DKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG------ 81
Query: 486 PTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCR--YADGRLVLYCKGADSV 543
V KM + + FNST K Q + VL KGA
Sbjct: 82 ---------SVRKMRD----RNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPER 128
Query: 544 IYERLANGNEDLKKV---------TREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFI 594
I +R ++ K++ + + G G R L +L + R +
Sbjct: 129 ILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK--- 185
Query: 595 QAKSSLRDREQKLDEVAELIEKDLTLIGCTAIED 628
+ + L +G ++ D
Sbjct: 186 -----------FDTDELNFPTEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 73.3 bits (179), Expect = 4e-14
Identities = 49/497 (9%), Positives = 98/497 (19%), Gaps = 165/497 (33%)
Query: 346 EELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSV 405
LG +I + + R+
Sbjct: 34 CYLGLHSHIDWETLTDNDIQDI-----------------------------------RNR 58
Query: 406 KAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASP 465
+K N L W + + H + I + +
Sbjct: 59 IFQKDKILNKLKSLGLNSNW----------DMLFIVFSIHLI---------DILKKLSHD 99
Query: 466 DEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVV 525
+ A + + + + L + V
Sbjct: 100 EIEAFMYQDEPVELKL---------------QNISTN----LADCFNLNEQLPLQFLDNV 140
Query: 526 CRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDM 585
+ + A L + L + + L + L +
Sbjct: 141 KVGKNNIYAALEEFAT----TELHVSDATLFSL-KGALWTLAQEVYQEWYLGSKLY---- 191
Query: 586 YERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQ--EGVPACIETLAR 643
++V + I + G E L+ + V + L
Sbjct: 192 ----------------------EDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKG 229
Query: 644 AGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMRE 703
AG ++ + TG + L+ FI T+
Sbjct: 230 AGFELGIATGRPYTETVVPFENLGLLPYFEADFIATAS---------------------- 267
Query: 704 EVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR 763
+ L P+ + L
Sbjct: 268 ----------------------DVLEAENMYPQARPLGKPNPFSYIAAL-------YGNN 298
Query: 764 VSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAH---IGV--GISGQEGMQAVMAS 818
+ + +GD D+ Q IG G+ G++ + A
Sbjct: 299 RDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAH 357
Query: 819 --DFAIAQFRFLTDLLL 833
D+ I L +L
Sbjct: 358 HADYVINHLGELRGVLD 374
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 52.5 bits (125), Expect = 2e-08
Identities = 42/215 (19%), Positives = 68/215 (31%), Gaps = 60/215 (27%)
Query: 613 LIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNE 672
+I D T T D ++ V I+ AGI++ ++TGD TAI I
Sbjct: 4 VICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC--------- 54
Query: 673 MKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALII 732
++ I E + D G + Q+
Sbjct: 55 -RRIGIFGENEEVADRAYTGRE--------------FDDLPLAEQREAC----------- 88
Query: 733 DGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGAN 792
+ RV P K+++ ++ +IT GDG N
Sbjct: 89 -----------------------RRACCFARVEPSHKSKIVEYLQSY-DEITAMTGDGVN 124
Query: 793 DVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 827
D ++ A IG+ + G A AS+ +A F
Sbjct: 125 DAPALKKAEIGIAM-GSGTAVAKTASEMVLADDNF 158
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 45.1 bits (106), Expect = 5e-06
Identities = 18/68 (26%), Positives = 28/68 (41%)
Query: 609 EVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 668
E + D T D L+E ++ L R GIK+ ++TGD +A I+ NL
Sbjct: 1 EKVTAVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 60
Query: 669 INNEMKQF 676
+
Sbjct: 61 DLVIAEVL 68
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 41.2 bits (95), Expect = 3e-04
Identities = 26/189 (13%), Positives = 57/189 (30%), Gaps = 6/189 (3%)
Query: 616 KDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQ 675
D T+ + E I GI I ++TG+ ++ A + + +
Sbjct: 9 IDGTITY---PNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAE 65
Query: 676 FIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGK 735
R D I + + + + + +
Sbjct: 66 DGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVR 125
Query: 736 CLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVS 795
++ L+ +L + +++ + S ++KA +K K +GDG ND+
Sbjct: 126 EIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIK---PKEVAHVGDGENDLD 182
Query: 796 MIQAAHIGV 804
+ V
Sbjct: 183 AFKVVGYKV 191
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (93), Expect = 7e-04
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 772 VTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVM-ASDFAIAQFRFL 828
+ L +K K + IGDGA D+ A +G G Q V + + I F L
Sbjct: 158 IKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 39.6 bits (91), Expect = 0.001
Identities = 21/193 (10%), Positives = 52/193 (26%), Gaps = 18/193 (9%)
Query: 617 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQF 676
D L + + I + + G+ + +L+G+ + + +
Sbjct: 11 DGNLTD---RDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGI-----NGP 62
Query: 677 IITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKC 736
+ + D + I +F E + + + + ++
Sbjct: 63 VFGENGGIMFDNDG-----SIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDI 117
Query: 737 LMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKI-----TLSIGDGA 791
+D + + S + + + ++ K L IGD
Sbjct: 118 DPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177
Query: 792 NDVSMIQAAHIGV 804
ND+ M Q
Sbjct: 178 NDMPMFQLPVRKA 190
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1159 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.96 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.91 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.91 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.89 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.87 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.78 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.47 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.87 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.59 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.51 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 98.46 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.45 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.33 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.31 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.22 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.13 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.08 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.05 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 97.87 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 97.8 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 97.72 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 97.71 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 97.67 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.31 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.19 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.13 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.84 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 96.78 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.73 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 96.7 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.46 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.28 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.01 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.65 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 95.37 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.32 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 95.12 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 94.7 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 94.66 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 94.65 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.65 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 93.89 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 93.51 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 92.8 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 92.13 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 89.95 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 89.68 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 88.51 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 88.04 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 86.08 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 83.83 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 82.95 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 81.4 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=5e-30 Score=259.17 Aligned_cols=148 Identities=26% Similarity=0.337 Sum_probs=125.4
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
||+|++++++|+.|+++||++||+|||+.+||++||++|||+.++..+.
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~------------------------------- 67 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA------------------------------- 67 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCT-------------------------------
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccc-------------------------------
Confidence 9999999999999999999999999999999999999999987654210
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEe
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 787 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~i 787 (1159)
...++|.++......+..+...+ ..+|||++|+||..+|+.+ |+.|++|+|+
T Consensus 68 ---------------------~~~~~~~~~~~~~~~~~~~~~~~------~~v~ar~~p~~K~~lv~~l-~~~g~~Va~v 119 (168)
T d1wpga2 68 ---------------------DRAYTGREFDDLPLAEQREACRR------ACCFARVEPSHKSKIVEYL-QSYDEITAMT 119 (168)
T ss_dssp ---------------------TTEEEHHHHHHSCHHHHHHHHHH------CCEEESCCHHHHHHHHHHH-HHTTCCEEEE
T ss_pred ---------------------cccccccccchhhHHHHhhhhhh------hhhhhccchhHHHHHHHHH-HhcccceeEE
Confidence 11456666666666666555554 3499999999999999999 6789999999
Q ss_pred cCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh-hhhhh
Q 001087 788 GDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHG 836 (1159)
Q Consensus 788 GDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l-ll~~G 836 (1159)
|||+||++||++|||||++ +|++. |+++|||++.+.++...+ ++.+|
T Consensus 120 GDG~nD~~AL~~AdvGIa~~~gt~~--a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 120 GDGVNDAPALKKAEIGIAMGSGTAV--AKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp ECSGGGHHHHHHSSEEEEETTSCHH--HHHTCSEEETTCCTHHHHHHHHHH
T ss_pred ecCCCCHHHHHhCCEEEEeccccHH--HHHhCCEEEccCCHHHHHHHHHcC
Confidence 9999999999999999999 55555 889999999998888766 56665
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.91 E-value=1.9e-25 Score=216.17 Aligned_cols=122 Identities=28% Similarity=0.407 Sum_probs=102.4
Q ss_pred CcEEEEEeeecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHH
Q 001087 617 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE 696 (1159)
Q Consensus 617 dl~llG~~~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 696 (1159)
|.+..+.++++|++|++++++|+.|+++||++||||||+++||.++|++|||-
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~--------------------------- 61 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--------------------------- 61 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS---------------------------
T ss_pred CCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh---------------------------
Confidence 44556689999999999999999999999999999999999999999999982
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHH
Q 001087 697 IARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLV 776 (1159)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~l 776 (1159)
.++++++|++|..+|+.+
T Consensus 62 --------------------------------------------------------------~v~~~~~p~~k~~~v~~~ 79 (135)
T d2b8ea1 62 --------------------------------------------------------------LVIAEVLPHQKSEEVKKL 79 (135)
T ss_dssp --------------------------------------------------------------EEECSCCHHHHHHHHHHH
T ss_pred --------------------------------------------------------------hhccccchhHHHHHHHHH
Confidence 189999999999999998
Q ss_pred HhccCcEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeeccccccchh
Q 001087 777 KKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL 831 (1159)
Q Consensus 777 k~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~~l~~l 831 (1159)
|. |.+|+|+|||.||+|||++|||||++ ++++. ++.+||++|.+.++...+
T Consensus 80 -q~-~~~v~~vGDg~nD~~aL~~Advgia~~~~~~~--~~~aADivl~~~~l~~i~ 131 (135)
T d2b8ea1 80 -QA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVV 131 (135)
T ss_dssp -TT-TSCEEEEECSSSSHHHHHHSSEEEEECCC----------SEEESSCCTHHHH
T ss_pred -Hc-CCEEEEEeCCCCcHHHHHhCCeeeecCccCHH--HHHhCCEEEECCCHHHHH
Confidence 43 56999999999999999999999998 55555 889999999998766543
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.91 E-value=8.5e-26 Score=239.10 Aligned_cols=170 Identities=17% Similarity=0.201 Sum_probs=123.9
Q ss_pred hhhHHHHHHHHhcccceEecccCCCCce-E-EecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEE
Q 001087 431 PDACKEFFRCLAICHTVLPEGDESPERI-T-YQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYE 508 (1159)
Q Consensus 431 ~~~~~~~~~~lalCh~v~~~~~~~~~~~-~-y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~ 508 (1159)
++....+++++++||++....+++.... . ...|+|+|.||+.+|.+.|+.... .+..|+
T Consensus 31 ~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~-------------------~r~~~~ 91 (214)
T d1q3ia_ 31 SPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK-------------------MRDRNP 91 (214)
T ss_dssp SHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHH-------------------HHHTSC
T ss_pred CHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHH-------------------HHhhCc
Confidence 4566789999999999976544321110 0 125899999999999988764311 134577
Q ss_pred EeEeecCCCCCceEEEEEEcC--CCcEEEEEecchhHHHHHhhc---------CChhhHHHHHHHHHHHhhcCCeEEEEE
Q 001087 509 ILNVLEFNSTRKRQSVVCRYA--DGRLVLYCKGADSVIYERLAN---------GNEDLKKVTREHLEQFGSSGLRTLCLA 577 (1159)
Q Consensus 509 il~~~~F~s~rkrmsviv~~~--~g~~~l~~KGA~~~i~~~~~~---------~~~~~~~~~~~~l~~~a~~GlRtL~~A 577 (1159)
++..+||+|.||||++|++.+ ++++++|+||||++|+++|+. -+++.++.+.+.+++||.+|+|||++|
T Consensus 92 ~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A 171 (214)
T d1q3ia_ 92 KVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFC 171 (214)
T ss_dssp EEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEE
Confidence 889999999999999999976 456899999999999999974 235667889999999999999999999
Q ss_pred EEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccCC
Q 001087 578 YRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEG 633 (1159)
Q Consensus 578 ~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~ 633 (1159)
||+++.+++..|... +.+ ..+.+|+||+|+|++||+||+|++
T Consensus 172 ~k~l~~~~~~~~~~~---------~~~-----~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 172 QLNLPSGKFPRGFKF---------DTD-----ELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEEECTTTSCTTCCC---------CTT-----TTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EEecCcccccccccc---------Chh-----hhhhhcCCCEEEEEEEEEeCCCCC
Confidence 999998876544221 110 124568999999999999999975
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.89 E-value=1.3e-28 Score=284.28 Aligned_cols=332 Identities=12% Similarity=0.013 Sum_probs=214.5
Q ss_pred ccccccCceEEEecCCCCCCCCceEEEEEEECCEeecCCchhhhhhhhhccCCCCcccccchhhhccCCCCCCChhhhhc
Q 001087 344 LNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRG 423 (1159)
Q Consensus 344 ~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (1159)
..|.||...++|+|||||+|.|.|+.+.+.-+. ... .....+++
T Consensus 32 s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~---------il~------------------~~k~~g~n--------- 75 (380)
T d1qyia_ 32 DKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDK---------ILN------------------KLKSLGLN--------- 75 (380)
T ss_dssp CTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTH---------HHH------------------HHHHTTCC---------
T ss_pred chhhcccceeeecCcccchhhhhheeeeecchh---------hhH------------------hhhhcCCC---------
Confidence 348899999999999999999999753221000 000 00001111
Q ss_pred cccCCCChhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccc
Q 001087 424 AWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQ 503 (1159)
Q Consensus 424 ~~~~~~~~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~ 503 (1159)
+ --++....++||.+.... +.+.|++.+++..++..+..+.. .
T Consensus 76 -------~--~~dl~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-------------------~ 118 (380)
T d1qyia_ 76 -------S--NWDMLFIVFSIHLIDILK---------KLSHDEIEAFMYQDEPVELKLQN-------------------I 118 (380)
T ss_dssp -------C--HHHHHHHHHHHHHHHHHT---------TSCHHHHHHHHHCSSCHHHHHTT-------------------S
T ss_pred -------h--hHHHHHHHHHHHHHHHHh---------hcCCCcHHHHHHHHhhccchHHH-------------------H
Confidence 0 113455666677653221 13678888888765443322110 1
Q ss_pred eEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecchhHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCH
Q 001087 504 DVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSP 583 (1159)
Q Consensus 504 ~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~ 583 (1159)
...|.....+||+|.||+|+++....++.+..+.||+++.+. .. +.....+.+.+++++.+|+|+|++|++..++
T Consensus 119 ~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----~~-~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~ 193 (380)
T d1qyia_ 119 STNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----VS-DATLFSLKGALWTLAQEVYQEWYLGSKLYED 193 (380)
T ss_dssp GGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----CS-CCGGGSTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----Cc-HHHHHHHHhHHHHHHHHHHHHHHHhhhcccc
Confidence 223444567899999999998877655556666677776552 11 1223455677889999999999998764432
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeeecccccC--ChHHHHHHHHHcCCeEEEEeCCcHhHHHH
Q 001087 584 DMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQE--GVPACIETLARAGIKIWVLTGDKMETAIN 661 (1159)
Q Consensus 584 ~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~--~v~etI~~L~~aGIkvwmLTGD~~eTAi~ 661 (1159)
.+ .....++...|.++.+|+++| |++++++.|+++||+++|+|||+..+|..
T Consensus 194 ~~--------------------------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~ 247 (380)
T d1qyia_ 194 VE--------------------------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVV 247 (380)
T ss_dssp HH--------------------------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred cc--------------------------cccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 21 223355667899999999665 99999999999999999999999999999
Q ss_pred HHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhc
Q 001087 662 IAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYAL 741 (1159)
Q Consensus 662 Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l 741 (1159)
+++++||...-....++..++. .. ....... ... .++ .
T Consensus 248 il~~lgl~~~F~~~~i~~~~d~----------------------~~----~~~~~~~--~~~---------~~K-----P 285 (380)
T d1qyia_ 248 PFENLGLLPYFEADFIATASDV----------------------LE----AENMYPQ--ARP---------LGK-----P 285 (380)
T ss_dssp HHHHHTCGGGSCGGGEECHHHH----------------------HH----HHHHSTT--SCC---------CCT-----T
T ss_pred HHHHcCCcccCCcceEEecchh----------------------hh----hhhhccc--ccc---------ccC-----C
Confidence 9999999753111111111100 00 0000000 000 000 0
Q ss_pred chhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCccCHHHHHhcc---cce--eecCccchh--h
Q 001087 742 DPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAH---IGV--GISGQEGMQ--A 814 (1159)
Q Consensus 742 ~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~Ad---VGI--gisg~e~~q--A 814 (1159)
+ ...+... ..++|++|.||..+|+.+ +..+..|+|||||.||++|+++|| ||| |+.|+++.+ +
T Consensus 286 ~---p~~~~~~------~~~~~~~~~~k~~iv~~~-~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~ 355 (380)
T d1qyia_ 286 N---PFSYIAA------LYGNNRDKYESYINKQDN-IVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELE 355 (380)
T ss_dssp S---THHHHHH------HHCCCGGGHHHHHHCCTT-CSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHH
T ss_pred C---hHHHHHH------HHHcCCCHHHHHHHHHHh-CCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHH
Confidence 0 1122222 268899999999999999 778999999999999999999999 888 556766532 2
Q ss_pred hhccceeeccccccchh
Q 001087 815 VMASDFAIAQFRFLTDL 831 (1159)
Q Consensus 815 ~~asD~~i~~f~~l~~l 831 (1159)
...||+++.++..+..+
T Consensus 356 ~~~AD~ii~~~~el~~i 372 (380)
T d1qyia_ 356 AHHADYVINHLGELRGV 372 (380)
T ss_dssp HTTCSEEESSGGGHHHH
T ss_pred hCCCCEEECCHHHHHHH
Confidence 34799999998887766
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.87 E-value=5.3e-23 Score=221.39 Aligned_cols=177 Identities=23% Similarity=0.236 Sum_probs=127.2
Q ss_pred hhhHHHHHHHHhcccceEecccCCCCceEEecCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEe
Q 001087 431 PDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEIL 510 (1159)
Q Consensus 431 ~~~~~~~~~~lalCh~v~~~~~~~~~~~~y~~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il 510 (1159)
.+.+.+++.++++||++....++..+.+ +..++|+|.||+.+|.+.|+.........-. +..... ....+..|+.+
T Consensus 47 ~~~l~~ll~~~~LCn~a~l~~~~~~~~~-~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~v 122 (239)
T d1wpga3 47 FDGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNVFNTEVRNLSKV--ERANAC-NSVIRQLMKKE 122 (239)
T ss_dssp CHHHHHHHHHHHHSCSCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCTTCCCCSSSCHH--HHTTHH-HHHHHHHEEEE
T ss_pred cHHHHHHHHHHHhcCCCEeeecCCCCeE-EEcCCCCcHHHHHHHHHhCCChHHhhccchh--hhhccc-hhhhhhhCeEE
Confidence 4567889999999999988665544433 4569999999999999999754322110000 000000 00013578999
Q ss_pred EeecCCCCCceEEEEEEcCCC-----cEEEEEecchhHHHHHhhc---------CChhhHHHHHHHHHHH--hhcCCeEE
Q 001087 511 NVLEFNSTRKRQSVVCRYADG-----RLVLYCKGADSVIYERLAN---------GNEDLKKVTREHLEQF--GSSGLRTL 574 (1159)
Q Consensus 511 ~~~~F~s~rkrmsviv~~~~g-----~~~l~~KGA~~~i~~~~~~---------~~~~~~~~~~~~l~~~--a~~GlRtL 574 (1159)
..+||||+||||||+++.+++ .+++|+||||+.|+++|+. ..++.++.+.+.++++ |++|||||
T Consensus 123 ~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvL 202 (239)
T d1wpga3 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 202 (239)
T ss_dssp EEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred EEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEE
Confidence 999999999999999998765 3689999999999999974 2345667777778876 78999999
Q ss_pred EEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEEEEeee
Q 001087 575 CLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAI 626 (1159)
Q Consensus 575 ~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~i 626 (1159)
++|||+++.++...+. .+.+ ..+.+|+||+|+|++||
T Consensus 203 a~A~k~~~~~~~~~~~----------~~~~-----~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 203 ALATRDTPPKREEMVL----------DDSS-----RFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEEESSCCCGGGCCT----------TCGG-----GHHHHTCSEEEEEEEEE
T ss_pred EEEEEECCcccccccc----------cchh-----hHHHhcCCCEEEEEECC
Confidence 9999999876432211 1110 13568999999999997
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.78 E-value=9.7e-20 Score=169.72 Aligned_cols=108 Identities=21% Similarity=0.252 Sum_probs=85.9
Q ss_pred eEEEeeCCe--EEEeeccCcccceEEEEccCCccCceEEEEeecCCCCeEEEeccCCCCCCcceeeeccccccccCChhh
Q 001087 72 PVEVLQGQR--WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEK 149 (1159)
Q Consensus 72 ~~~V~r~g~--~~~i~~~~l~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~ 149 (1159)
.++|+|+|+ .++|++++|+|||||.|++|+.+|||++||...+ +.++||||+|||||.|+.|.+.+...
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~--~~l~vdes~lTGEs~pv~K~~~~~~~------- 72 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGESVSVIKHTEPVPD------- 72 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCCEEECHHHHSCCSCEECCCSCCCC-------
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeec--cceEEEEeecccceEEEEeecccccc-------
Confidence 579999996 4789999999999999999999999999997643 34789999999999999998754321
Q ss_pred hcccceEEEecCCCCCcceeEEEEEEcCccccCCCCceeeccceeecCCcEEEEEEEeccchhhhhc
Q 001087 150 ASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMN 216 (1159)
Q Consensus 150 ~~~~~g~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~i~gvVv~tG~~Tk~~~n 216 (1159)
+.....+..|++++||.+. .|.++++|++||.+|.+.+.
T Consensus 73 ---------------------------~~~~~~~~~n~lf~GT~V~-~G~~~~~V~~tG~~T~~G~i 111 (115)
T d1wpga1 73 ---------------------------PRAVNQDKKNMLFSGTNIA-AGKALGIVATTGVSTEIGKI 111 (115)
T ss_dssp ---------------------------TTCCGGGCTTEECTTCEEE-ECEEEEEEEECGGGSHHHHH
T ss_pred ---------------------------cccccccccceEEeccEEE-eeeEEEEEEEEccccHHHHH
Confidence 0111223567777777776 46699999999999977653
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.47 E-value=5.7e-13 Score=156.70 Aligned_cols=212 Identities=15% Similarity=0.107 Sum_probs=160.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHhhhhhhHHHhhhccccCCChhhhhcCchh
Q 001087 835 HGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQL 914 (1159)
Q Consensus 835 ~Gr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fsg~~~~~~~~l~~~n~i~t~lp~~~l~~~d~~~~~~~~~~~P~l 914 (1159)
.||..|.++.|.+.|.+..|+..++..+++.++. ..+++++.|++|.|++++.+|+++++.+++ ++++|.++|+
T Consensus 227 ~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~---~p~pl~~~qILwinli~d~lpaiaL~~ep~--d~~iM~~~Pr- 300 (472)
T d1wpga4 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG---LPEALIPVQLLWVNLVTDGLPATALGFNPP--DLDIMDRPPR- 300 (472)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCSCCHHHHHHHHHTTTHHHHHHHTTCCC--CSGGGGSCCC-
T ss_pred HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcC---CCccccHHHHHHHHHHhHHHHHHHHhcCCC--chhhhcCCCC-
Confidence 4999999999999999999999999999988874 345689999999999999999999998665 7889999998
Q ss_pred hhccCcccccCHHHHHHHHHHHHHHHHHHHHHHH-hccCCccC---------------C--------CCcccccccchhH
Q 001087 915 YQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSATGQN---------------S--------SGKIFGIWDVSTM 970 (1159)
Q Consensus 915 y~~~~~~~~~~~~~f~~~~~~~~~~s~vif~~~~-~~~~~~~~---------------~--------~g~~~~~~~~~~~ 970 (1159)
+++.++++.+.++.+...|++.+++.+...+ .+...... . +.+........|+
T Consensus 301 ---~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~ 377 (472)
T d1wpga4 301 ---SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTM 377 (472)
T ss_dssp ---CTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHH
T ss_pred ---CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHH
Confidence 7778899999999888888888877665544 22111000 0 0011122345688
Q ss_pred HHHHHHHHHHHHHHHhhccc-------hhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCceeeEeeeec-cchHHHHHH
Q 001087 971 AFTCVVVTVNLRLLMMCNTI-------TRFHYITVGGSILAWFLFVFLYTGIMTPNDRQENVFFVIFVLM-STFYFYFTL 1042 (1159)
Q Consensus 971 ~~~~~v~~~~~~~~l~~~~~-------~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~ 1042 (1159)
+|+++++.+.++. +.+++. .++.+..++.++++.+++.++..++|+ ++.++++. .++..|+.+
T Consensus 378 ~F~~lv~~q~~~~-~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~--------l~~vf~~~pL~~~~w~i~ 448 (472)
T d1wpga4 378 ALSVLVTIEMCNA-LNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDP--------LPMIFKLKALDLTQWLMV 448 (472)
T ss_dssp HHHHHHHHHHHHH-HTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTT--------THHHHTCCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhH--------HHHHHcccCCCHHHHHHH
Confidence 9999988877774 333331 234566777777777776666666543 34566777 889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhC
Q 001087 1043 ILVPVLALLGDFIFQGVQRWFS 1064 (1159)
Q Consensus 1043 l~~~~~~l~~~~~~k~~~~~~~ 1064 (1159)
+.+++++++.+++.|++.|+|.
T Consensus 449 l~~~~~~~~~~El~K~~~R~~~ 470 (472)
T d1wpga4 449 LKISLPVIGLDEILKFIARNYL 470 (472)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999988764
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=1.8e-09 Score=112.80 Aligned_cols=132 Identities=20% Similarity=0.295 Sum_probs=93.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
+++||+.++|+.|++.|++++++||.....+..+++.+|+-..+ ++. +.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~a-n~---------------------------- 130 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFA-NR---------------------------- 130 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEE-EC----------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eee-ee----------------------------
Confidence 47899999999999999999999999999999999999985321 110 00
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC-cEEEEe
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR-KITLSI 787 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g-~~vl~i 787 (1159)
+....+|.-..... .-.-..+..|+.+++.++++.+ ..++|+
T Consensus 131 -------------------~~~~~~G~~~g~~~------------------~~p~~~~~~K~~~v~~~~~~~~~~~~~~v 173 (217)
T d1nnla_ 131 -------------------LKFYFNGEYAGFDE------------------TQPTAESGGKGKVIKLLKEKFHFKKIIMI 173 (217)
T ss_dssp -------------------EEECTTSCEEEECT------------------TSGGGSTTHHHHHHHHHHHHHCCSCEEEE
T ss_pred -------------------eeeeehhcccccee------------------eeeeeccchHHHHHHHHHhccCccccEEE
Confidence 00001111100000 0011346789999999965433 468999
Q ss_pred cCCccCHHHHHhcccceeecCccc-hhhhhccceeecccccc
Q 001087 788 GDGANDVSMIQAAHIGVGISGQEG-MQAVMASDFAIAQFRFL 828 (1159)
Q Consensus 788 GDG~NDv~mL~~AdVGIgisg~e~-~qA~~asD~~i~~f~~l 828 (1159)
|||.||++|+++|++||++.+... .+.+..+|+.+.+|..+
T Consensus 174 GDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 174 GDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp ESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred EeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 999999999999999999966443 34567899999887654
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.59 E-value=1.9e-08 Score=105.05 Aligned_cols=182 Identities=16% Similarity=0.167 Sum_probs=96.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcc---cchhcccCChHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNA---IRDVEERGDPVEIARFMREEV 705 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 705 (1159)
.+.+.+.++|++|+++|+++++.||.....+...++..++-.. .+.-++.... .......... .....
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~---~i~~~g~~~~~~~~~~~~~~~~~---~~~~~--- 89 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP---VVAEDGGAISYKKKRIFLASMDE---EWILW--- 89 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC---EEEGGGTEEEETTEEEESCCCSH---HHHHH---
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcc---cccccceeeeccccccccccccH---HHHHH---
Confidence 4678899999999999999999999999999999998887421 1111110000 0000000000 00111
Q ss_pred HHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcC-----CceEEEecChhhHHHHHHHHHhcc
Q 001087 706 KRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNC-----SSVVCCRVSPLQKAQVTSLVKKGA 780 (1159)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~-----~~vI~~R~sP~qK~~iV~~lk~~~ 780 (1159)
.++.......... .........+.+....... +..++...++-... ...+-.......|...++.+.++.
T Consensus 90 -~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~ 164 (230)
T d1wr8a_ 90 -NEIRKRFPNARTS-YTMPDRRAGLVIMRETINV---ETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFL 164 (230)
T ss_dssp -HHHHHHCTTCCBC-TTGGGCSSCEEECTTTSCH---HHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHH
T ss_pred -HHHHHhcccccce-eecccceeeEEEecccccH---HHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhccccccc
Confidence 1111111111000 0011112222222221111 11122122211111 011122234458888888775544
Q ss_pred C---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeecccc
Q 001087 781 R---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFR 826 (1159)
Q Consensus 781 g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f~ 826 (1159)
| ..|+++|||.||.+|++.|++||++. +.+. ++.+||+++...+
T Consensus 165 ~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~--~k~~A~~v~~~~~ 212 (230)
T d1wr8a_ 165 GIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKI--LKENADYVTKKEY 212 (230)
T ss_dssp TSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHTTCSEECSSCH
T ss_pred ccchhheeeeecCccHHHHHHHCCeEEEECCCCHH--HHHhCCEEECCCC
Confidence 3 67999999999999999999999994 4444 7888999986543
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.51 E-value=3.2e-08 Score=103.53 Aligned_cols=181 Identities=13% Similarity=0.083 Sum_probs=99.2
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCc-c-cchhcccCChHHHHHHHHHH
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETN-A-IRDVEERGDPVEIARFMREE 704 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 704 (1159)
+.++.+++.++++.|++.|+++++.||.....+..++...|+-. ..+.-++... + ............+. .
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~---~~i~~~G~~~~~~~~~~~~~~~~~~~~-----~ 89 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNEGTN-----K 89 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSHHHH-----H
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc---eEEeecceEEEeCCccEEEecChHHHH-----H
Confidence 45677899999999999999999999999999999998888733 2221111000 0 00000001111111 1
Q ss_pred HHHHHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceE-----EEecCh--hhHHHHHHHHH
Q 001087 705 VKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVV-----CCRVSP--LQKAQVTSLVK 777 (1159)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI-----~~R~sP--~qK~~iV~~lk 777 (1159)
.........................+.++...+. .....+......+ ++...| ..|+..++.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~ 160 (225)
T d1l6ra_ 90 FLEEMSKRTSMRSILTNRWREASTGFDIDPEDVD---------YVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLK 160 (225)
T ss_dssp HHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHH---------HHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHH
T ss_pred HHHHHHHhcCcceeecccceeeeeccccCHHHHH---------HHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHh
Confidence 1111100000000000001111222223332222 2222222222223 333444 38998888775
Q ss_pred hccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeecccc
Q 001087 778 KGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFR 826 (1159)
Q Consensus 778 ~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f~ 826 (1159)
+..| .-|+++|||.||.+|++.|++||+++ +.+. ++..||++.....
T Consensus 161 ~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~--~k~~ad~v~~~~~ 211 (225)
T d1l6ra_ 161 EMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDN--IKAVSDFVSDYSY 211 (225)
T ss_dssp HHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHH--HHHHCSEECSCCT
T ss_pred hhhccchhheeeecCCcchHHHHHHCCeEEEECCCcHH--HHHhCCEEECCCC
Confidence 5543 55999999999999999999999994 4555 7789999776544
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.46 E-value=3e-08 Score=115.69 Aligned_cols=70 Identities=21% Similarity=0.162 Sum_probs=65.3
Q ss_pred HHHHHHHHhhccccchhHHHHHHHHHHhhhhhhccccccccccCCCCccccCCcccccccCceEEEecCC--CCCCCCce
Q 001087 290 NMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKT--GTLTRNLM 367 (1159)
Q Consensus 290 ~~~~~~~l~~~~iP~sL~v~i~~~~~~~~~~~i~~d~~my~~~~~~~~~~r~~~~~E~LG~V~~I~sDKT--GTLT~n~m 367 (1159)
.+..++.+.+.++|++||+.++++.+++ +++| ++++++||+.+.+|+||+..++|+||| +|||.|.+
T Consensus 180 ~~~~ai~l~V~~iPEgLp~~vti~La~~-~~rm----------ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~ 248 (472)
T d1wpga4 180 YFKIAVALAVAAIPEGLPAVITTCLALG-TRRM----------AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVG 248 (472)
T ss_dssp HHHHHHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHH-HHHH----------HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHH
Confidence 6777889999999999999999999999 9988 899999999999999999999999998 99999987
Q ss_pred EEE
Q 001087 368 EFF 370 (1159)
Q Consensus 368 ~~~ 370 (1159)
++.
T Consensus 249 ~v~ 251 (472)
T d1wpga4 249 EVV 251 (472)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.45 E-value=1.4e-07 Score=94.23 Aligned_cols=113 Identities=20% Similarity=0.176 Sum_probs=81.5
Q ss_pred HHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHHHHHHHHH
Q 001087 636 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDE 715 (1159)
Q Consensus 636 etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (1159)
..|+.|+.+|+.+.++||+....+...+.+.++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 37999999999999999999999999998887731
Q ss_pred hhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhcc---CcEEEEecCCcc
Q 001087 716 AQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA---RKITLSIGDGAN 792 (1159)
Q Consensus 716 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~---g~~vl~iGDG~N 792 (1159)
++. ....|...++.+.++. -..|+++|||.|
T Consensus 74 --------------------------------------------~~~--~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~n 107 (177)
T d1k1ea_ 74 --------------------------------------------FFL--GKLEKETACFDLMKQAGVTAEQTAYIGDDSV 107 (177)
T ss_dssp --------------------------------------------EEE--SCSCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred --------------------------------------------ccc--ccccHHHHHHHHHHHhcCCcceeEEecCCcc
Confidence 111 1233444443332333 378999999999
Q ss_pred CHHHHHhcccceeecCccchhhhhccceeeccc------cccc-hhhhhhhhhHH
Q 001087 793 DVSMIQAAHIGVGISGQEGMQAVMASDFAIAQF------RFLT-DLLLVHGRWSY 840 (1159)
Q Consensus 793 Dv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f------~~l~-~lll~~Gr~~~ 840 (1159)
|.+||+.|++|+++...... ++..|||++..- +-+. .+|-.+|+|.+
T Consensus 108 Dl~~l~~~g~siap~nA~~~-vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~~~ 161 (177)
T d1k1ea_ 108 DLPAFAACGTSFAVADAPIY-VKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 161 (177)
T ss_dssp GHHHHHHSSEEEECTTSCHH-HHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHhhCCeEEEcCCccHH-HHHhCCEEeCCCCCCchHHHHHHHHHHHCCChHH
Confidence 99999999999999554322 889999999752 2222 23456777765
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.33 E-value=1.9e-07 Score=100.21 Aligned_cols=194 Identities=12% Similarity=0.105 Sum_probs=101.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCc----ccchhcccCChHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETN----AIRDVEERGDPVEIARFMREE 704 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~----~~~~~~~~~~~~~~~~~~~~~ 704 (1159)
++.+.+.++|++|+++||++++.||.+...+..+..++++..+....+..++..- +........-.....+.+.+.
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~~ 100 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKL 100 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHHH
Confidence 4678889999999999999999999999999999999998765443332222110 000000000011111111111
Q ss_pred HHHH------------------------HHHHHHHhhhh------ccccCCCceEEEEcccchhHhcchhHHHHHHHHhh
Q 001087 705 VKRE------------------------LNKCIDEAQQY------IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSL 754 (1159)
Q Consensus 705 ~~~~------------------------~~~~~~~~~~~------~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~ 754 (1159)
.... .+......... ..........+.++......-....+...+.....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (271)
T d1rkqa_ 101 SREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 180 (271)
T ss_dssp HHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHEE
T ss_pred HHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcceE
Confidence 1000 00000000000 00001112233333332221111122222222110
Q ss_pred cC-CceEEEecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeecC-ccchhhhhccceeecc
Q 001087 755 NC-SSVVCCRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISG-QEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 755 ~~-~~vI~~R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~asD~~i~~ 824 (1159)
.. ..--+...+|. .|+..++.+.+..+ .-++++|||.||.+|++.|+.||++.. .+. .+..||++...
T Consensus 181 ~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~--lk~~a~~i~~~ 255 (271)
T d1rkqa_ 181 VLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPS--VKEVANFVTKS 255 (271)
T ss_dssp EEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHHHCSEECCC
T ss_pred EEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHH--HHHhCCEEcCC
Confidence 00 00012334555 69999988865543 458999999999999999999999944 444 67789998764
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.31 E-value=4.1e-07 Score=94.70 Aligned_cols=113 Identities=13% Similarity=0.184 Sum_probs=82.4
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++.||+.+.++.|++.|+++.++||-..+.+..+....|+... .+. +.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~---~~a-n~---------------------------- 122 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR---IYC-NH---------------------------- 122 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGG---EEE-EE----------------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccc---eee-ee----------------------------
Confidence 4789999999999999999999999999999999998887532 110 00
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEec
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 788 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iG 788 (1159)
+.+++........ ......+++.+|..|..+++.+ +..+..|+|||
T Consensus 123 ---------------------~~~~~~~~~~~~~------------~~~~~~~~~~k~~~~~~~~~~~-~~~~~~~i~iG 168 (226)
T d2feaa1 123 ---------------------ASFDNDYIHIDWP------------HSCKGTCSNQCGCCKPSVIHEL-SEPNQYIIMIG 168 (226)
T ss_dssp ---------------------EECSSSBCEEECT------------TCCCTTCCSCCSSCHHHHHHHH-CCTTCEEEEEE
T ss_pred ---------------------EEEeCCcceeccc------------cccccccccCCHHHHHHHHHHh-cCCCceEEEEe
Confidence 0111110000000 0001144567899999999999 67788999999
Q ss_pred CCccCHHHHHhcccceeec
Q 001087 789 DGANDVSMIQAAHIGVGIS 807 (1159)
Q Consensus 789 DG~NDv~mL~~AdVGIgis 807 (1159)
|+.||.+|+++||+++++.
T Consensus 169 Ds~~Dl~~a~~A~~~~a~~ 187 (226)
T d2feaa1 169 DSVTDVEAAKLSDLCFARD 187 (226)
T ss_dssp CCGGGHHHHHTCSEEEECH
T ss_pred CchhhHHHHHHCCEEEEec
Confidence 9999999999999999773
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.22 E-value=2.9e-06 Score=86.09 Aligned_cols=126 Identities=18% Similarity=0.161 Sum_probs=83.8
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
+..++....++.+ +.+.++..+||.-.......+...++..............
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------- 121 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc--------------------------
Confidence 4567777777766 5789999999999998888888887754322211111100
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEec
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 788 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iG 788 (1159)
.....-...+.-+...++.+ +....-|+|||
T Consensus 122 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~-~i~~~eviaiG 152 (206)
T d1rkua_ 122 ------------------------------------------------RVVGYQLRQKDPKRQSVIAF-KSLYYRVIAAG 152 (206)
T ss_dssp ------------------------------------------------CEEEEECCSSSHHHHHHHHH-HHTTCEEEEEE
T ss_pred ------------------------------------------------ccccccccchhhHHHHHHHh-cccccceEEec
Confidence 11123333444445566666 56678999999
Q ss_pred CCccCHHHHHhcccceeecCccchhhhhccceeec-cccccchh
Q 001087 789 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIA-QFRFLTDL 831 (1159)
Q Consensus 789 DG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~-~f~~l~~l 831 (1159)
||.||.+||+.|++||++...+.. .+.++||+.. ++.-+...
T Consensus 153 Dg~NDi~Ml~~Ag~gIAmna~~~v-~~~~~~~~~~~~~~d~~~~ 195 (206)
T d1rkua_ 153 DSYNDTTMLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp CSSTTHHHHHHSSEEEEESCCHHH-HHHCTTSCEECSHHHHHHH
T ss_pred CCccCHHHHHhCCccEEECCCHHH-HHhCCCceeecCHHHHHHH
Confidence 999999999999999999444433 5678899763 44444433
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.13 E-value=1.8e-06 Score=87.97 Aligned_cols=127 Identities=19% Similarity=0.188 Sum_probs=83.3
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
.++.+++.+.++.++..|..+.+.||.....+.......++...-...+......
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 128 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK------------------------- 128 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE-------------------------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc-------------------------
Confidence 4788999999999999999999999999999988888877643211111110000
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHH---hccCcEE
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVK---KGARKIT 784 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk---~~~g~~v 784 (1159)
...... ..-..+..|...++.+. +....-+
T Consensus 129 --------------------~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (210)
T d1j97a_ 129 --------------------LTGDVE---------------------------GEVLKENAKGEILEKIAKIEGINLEDT 161 (210)
T ss_dssp --------------------EEEEEE---------------------------CSSCSTTHHHHHHHHHHHHHTCCGGGE
T ss_pred --------------------cccccc---------------------------ccccccccccchhhhHHHHhcccccce
Confidence 000000 00001122222222221 2234568
Q ss_pred EEecCCccCHHHHHhcccceeecCccchhhhhccceeecccccc
Q 001087 785 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFL 828 (1159)
Q Consensus 785 l~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~~l 828 (1159)
+|+|||.||.+|+++|++||++.+.+. .+..||+++...++-
T Consensus 162 i~iGDs~nDi~m~~~ag~~va~na~~~--lk~~Ad~vi~~~d~~ 203 (210)
T d1j97a_ 162 VAVGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEKRDLR 203 (210)
T ss_dssp EEEESSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSSCGG
T ss_pred EEecCCcChHHHHHHCCCCEEECCCHH--HHHhCCEEEcCCCHH
Confidence 999999999999999999999977776 556899999865543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.08 E-value=1.3e-06 Score=93.36 Aligned_cols=61 Identities=21% Similarity=0.244 Sum_probs=49.5
Q ss_pred EecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeecc
Q 001087 762 CRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 762 ~R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~ 824 (1159)
..++|. .|+.-++.+.+..| .-|+++|||.||.+||+.|+.||++. +.+. .+..||++...
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~--lk~~A~~v~~~ 248 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAEN--IKQIARYATDD 248 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHH--HHHHCSEECCC
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHH--HHHhCCEEcCC
Confidence 456675 59999988866655 45999999999999999999999994 4454 77899998865
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.05 E-value=6e-06 Score=88.69 Aligned_cols=59 Identities=29% Similarity=0.332 Sum_probs=48.3
Q ss_pred cChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeecc
Q 001087 764 VSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 764 ~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~ 824 (1159)
++|. .|+.-++.+.+..| ..|+++|||.||.+||+.|+.||++ .+.+. ++..||++...
T Consensus 207 i~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~--~k~~A~~v~~~ 271 (285)
T d1nrwa_ 207 LSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARED--IKSIADAVTLT 271 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHH--HHHHCSEECCC
T ss_pred EecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHH--HHHhCCEEcCC
Confidence 4554 79998888866655 4699999999999999999999999 45444 77899998864
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.87 E-value=3.7e-05 Score=81.35 Aligned_cols=61 Identities=31% Similarity=0.468 Sum_probs=48.2
Q ss_pred ecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeeccc
Q 001087 763 RVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQF 825 (1159)
Q Consensus 763 R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~f 825 (1159)
.+.|. .|+.-++.+.++.| ..++++|||.||++||+.|+.||++. +.+. ++..||++....
T Consensus 179 ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~--lk~~A~~vt~~~ 245 (260)
T d2rbka1 179 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKED--VKAAADYVTAPI 245 (260)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHHHSSEECCCG
T ss_pred EEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHH--HHHhCCEEeCCC
Confidence 34454 79999888866544 57999999999999999999999995 4555 778999876543
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=97.80 E-value=4.9e-05 Score=78.19 Aligned_cols=41 Identities=7% Similarity=0.067 Sum_probs=38.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.+.+.+.++|++|+++|+++++.||-....+..+....++-
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 47788999999999999999999999999999999999873
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=97.72 E-value=2.6e-05 Score=82.93 Aligned_cols=63 Identities=21% Similarity=0.302 Sum_probs=50.2
Q ss_pred EecChh--hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceee-cCccchhhhhccceeecccc
Q 001087 762 CRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFR 826 (1159)
Q Consensus 762 ~R~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~asD~~i~~f~ 826 (1159)
..++|. .|+..++.+.+..| .-|+++|||.||.+||+.|++||++ .+.+. ++..||+++...+
T Consensus 182 ~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~--~k~~A~~i~~~~~ 250 (267)
T d1nf2a_ 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEK--VKEASDIVTLTNN 250 (267)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHH--HHHHCSEECCCTT
T ss_pred eeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHH--HHHhCCEEcCCCC
Confidence 346675 79999988865544 4589999999999999999999999 44444 7889999987543
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=97.71 E-value=2.5e-05 Score=83.37 Aligned_cols=55 Identities=16% Similarity=0.257 Sum_probs=44.4
Q ss_pred hHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeec-Cccchhhhhccceeecc
Q 001087 768 QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQ 824 (1159)
Q Consensus 768 qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~asD~~i~~ 824 (1159)
.|+.-++.+.+..+ ..|+++|||.||.+|++.|++||+++ +.+. ++..||++...
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~--~k~~a~~v~~~ 265 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDS--AKSHAKCVLPV 265 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHH--HHHHSSEECSS
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHH--HHHhCCEEECC
Confidence 68777777654443 67999999999999999999999994 4444 78899998864
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.67 E-value=7.1e-05 Score=77.70 Aligned_cols=43 Identities=12% Similarity=0.034 Sum_probs=38.6
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.+...+.+.++|+.|+++|+++++.||-....+..+....++-
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 4555677899999999999999999999999999999999874
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.31 E-value=4.5e-05 Score=79.75 Aligned_cols=56 Identities=21% Similarity=0.213 Sum_probs=42.9
Q ss_pred ChhhHHHHHHHHHhccC---cEEEEecCCccCHHHHHhcccceeecC-ccchhhhhccceee
Q 001087 765 SPLQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISG-QEGMQAVMASDFAI 822 (1159)
Q Consensus 765 sP~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~asD~~i 822 (1159)
....|+..++.+.+..| .-|+++|||.||.+||+.|+.||++.. .+. .+..||...
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~--lk~~a~~~~ 218 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPE--LLHWYDQWG 218 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHH--HHHHHHHHC
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHH--HHHHhhccc
Confidence 34579999988866655 458999999999999999999999954 333 455666443
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.19 E-value=0.00027 Score=72.13 Aligned_cols=61 Identities=18% Similarity=0.226 Sum_probs=44.6
Q ss_pred EEecChh--hHHHHHHHHHhccCcEEEEecCCccCHHHHHhcccceeecCccchhhhhccceeecccc
Q 001087 761 CCRVSPL--QKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 826 (1159)
Q Consensus 761 ~~R~sP~--qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~asD~~i~~f~ 826 (1159)
+..+.|. .|+.-++.+.+ . .-++++||+.||.+|++.|+-|+++.-.+ +..+|++.+.+-.
T Consensus 150 ~idi~p~g~~Kg~al~~l~~-~-~~~i~~GDs~ND~~Mf~~~~~~~av~~g~---~~~~A~~~~~~~~ 212 (229)
T d1u02a_ 150 IIELRVPGVNKGSAIRSVRG-E-RPAIIAGDDATDEAAFEANDDALTIKVGE---GETHAKFHVADYI 212 (229)
T ss_dssp EEEEECTTCCHHHHHHHHHT-T-SCEEEEESSHHHHHHHHTTTTSEEEEESS---SCCCCSEEESSHH
T ss_pred EEEEecCCCCHHHHHHHHhc-c-ccceeecCCCChHHHHhccCCeEEEEeCC---CCccCeEEcCCHH
Confidence 3455554 79999999843 3 45789999999999999998888773222 3357888887533
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.13 E-value=0.00073 Score=68.67 Aligned_cols=43 Identities=21% Similarity=0.228 Sum_probs=39.4
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 670 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~ 670 (1159)
.++.+|++++++.|++.|++++++||.....+..+..++||..
T Consensus 94 ~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~ 136 (224)
T d2hsza1 94 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH 136 (224)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred cchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchh
Confidence 3568999999999999999999999999999999999999853
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=96.84 E-value=0.0019 Score=65.37 Aligned_cols=41 Identities=12% Similarity=0.178 Sum_probs=38.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.||++++++.|+++|+++.++||.....+..+....||.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~ 128 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR 128 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 34699999999999999999999999999999999999994
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.001 Score=68.13 Aligned_cols=54 Identities=11% Similarity=0.225 Sum_probs=42.9
Q ss_pred hHHHHHHHHHhccCcEEEEecC----CccCHHHHHhcc-cceeecCccchhhhhccceee
Q 001087 768 QKAQVTSLVKKGARKITLSIGD----GANDVSMIQAAH-IGVGISGQEGMQAVMASDFAI 822 (1159)
Q Consensus 768 qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~Ad-VGIgisg~e~~qA~~asD~~i 822 (1159)
.|+.-++.|.+....-|+++|| |.||.+|+++|. .|+++.+.+-. ++..+||++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~-~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT-VQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH-HHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHH-HHHHHHhcC
Confidence 7888888886656678999999 679999999997 69999654432 667777765
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.73 E-value=0.002 Score=64.65 Aligned_cols=116 Identities=16% Similarity=0.118 Sum_probs=80.0
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHH
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 707 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1159)
-++.+|+.++++.|+..+ ++.++|+.....+..+....|+..--
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f----------------------------------- 126 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF----------------------------------- 126 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC-----------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc-----------------------------------
Confidence 467899999999999775 89999999999999999998875311
Q ss_pred HHHHHHHHhhhhccccCCCceEEEEcccchhHhcchhHHHHHHHHhhcCCceEEEecChhhHHHHHHHHHhcc---CcEE
Q 001087 708 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA---RKIT 784 (1159)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~---g~~v 784 (1159)
..++.+.-.+..|..+...+.+.. ..-+
T Consensus 127 -------------------------------------------------d~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 157 (210)
T d2ah5a1 127 -------------------------------------------------DGIYGSSPEAPHKADVIHQALQTHQLAPEQA 157 (210)
T ss_dssp -------------------------------------------------SEEEEECSSCCSHHHHHHHHHHHTTCCGGGE
T ss_pred -------------------------------------------------cccccccccccccccccchhhhhhhcccccc
Confidence 112333344444444444443333 3679
Q ss_pred EEecCCccCHHHHHhccc-ceee-cCccchhh--hhccceeecccccc
Q 001087 785 LSIGDGANDVSMIQAAHI-GVGI-SGQEGMQA--VMASDFAIAQFRFL 828 (1159)
Q Consensus 785 l~iGDG~NDv~mL~~AdV-GIgi-sg~e~~qA--~~asD~~i~~f~~l 828 (1159)
+||||+.||+.|-++|++ .|++ .|....+. ...+|+++.++.-+
T Consensus 158 v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el 205 (210)
T d2ah5a1 158 IIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV 205 (210)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred eeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence 999999999999999988 5666 34322222 23479988775543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.70 E-value=0.0013 Score=69.97 Aligned_cols=46 Identities=15% Similarity=0.324 Sum_probs=41.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCce
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK 674 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~ 674 (1159)
+||+|+++.++.|++.||++.++||-=......++++.|+..++.+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~ 180 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVK 180 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCce
Confidence 4899999999999999999999999999999999999998765543
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.46 E-value=0.00089 Score=62.92 Aligned_cols=107 Identities=17% Similarity=0.240 Sum_probs=74.0
Q ss_pred cCChhHHHHHHHHHHcCcEEEeecCceEEEEeccccccCccceEEEEEeEeecCCCCCceEEEEEEcCCCcEEEEEecch
Q 001087 462 AASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGAD 541 (1159)
Q Consensus 462 ~~spdE~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGA~ 541 (1159)
++||...|++++|++.|...... ..+.-....+|...++...+.+ +|+ .+..|++
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~g~~~---~g~--~v~~G~~ 83 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERD--------------------VQSLHATFVPFTAQSRMSGINI---DNR--MIRKGSV 83 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCC--------------------TTTTTCEEEEEETTTTEEEEEE---TTE--EEEEECH
T ss_pred CCchHHHHHHHHHHHhcCCCccc--------------------cccccccccccccccceEEEEE---CCE--EEEecHH
Confidence 57999999999999865421100 0011112345665555444433 443 4557999
Q ss_pred hHHHHHhhcCChhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhcCcEEE
Q 001087 542 SVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLI 621 (1159)
Q Consensus 542 ~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~ll 621 (1159)
..|.+.+...+....+...+.+++++.+|.+++.+|. |-.++
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~--------------------------------------d~~~~ 125 (136)
T d2a29a1 84 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVE--------------------------------------GSRVL 125 (136)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEE--------------------------------------TTEEE
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEE--------------------------------------CCEEE
Confidence 8887776654444567788889999999999999994 66899
Q ss_pred EEeeeccccc
Q 001087 622 GCTAIEDKLQ 631 (1159)
Q Consensus 622 G~~~ieD~lq 631 (1159)
|++++.|++|
T Consensus 126 G~i~l~D~iK 135 (136)
T d2a29a1 126 GVIALKDIVK 135 (136)
T ss_dssp EEEEEEESSC
T ss_pred EEEEEEeecC
Confidence 9999999986
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.28 E-value=0.0047 Score=62.81 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=37.7
Q ss_pred cccCChHHHHHHHHHcC-CeEEEEeCCcHhHHHHHHHHcCccc
Q 001087 629 KLQEGVPACIETLARAG-IKIWVLTGDKMETAINIAYACNLIN 670 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aG-IkvwmLTGD~~eTAi~Ia~~~gl~~ 670 (1159)
++-+|+.++++.|++.| +++.++||...+.+..+....||..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~ 133 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 133 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc
Confidence 45689999999999987 8999999999999999999999853
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.01 E-value=0.0031 Score=65.60 Aligned_cols=41 Identities=32% Similarity=0.266 Sum_probs=37.9
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|++++++.|++.|+++.++||...+.+..+-...|+.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~ 139 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 139 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc
Confidence 68899999999999999999999999999999888888874
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.65 E-value=0.0075 Score=60.07 Aligned_cols=40 Identities=18% Similarity=0.227 Sum_probs=33.3
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.|||.++++.|++.|+++.++|+-. ..+..+-+..||.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~-~~~~~~l~~~gl~ 121 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKG-NNAFTILKDLGVE 121 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHHTCG
T ss_pred cccchHHhhhhcccccccchhhhcccc-hhhhhhhhhcccc
Confidence 567999999999999999999999854 4566677777774
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=95.37 E-value=0.021 Score=55.90 Aligned_cols=50 Identities=24% Similarity=0.336 Sum_probs=35.2
Q ss_pred CcEEEEecCCccCHHHHHhcccc--eee-cCccc-hhhhhccceeeccccccch
Q 001087 781 RKITLSIGDGANDVSMIQAAHIG--VGI-SGQEG-MQAVMASDFAIAQFRFLTD 830 (1159)
Q Consensus 781 g~~vl~iGDG~NDv~mL~~AdVG--Igi-sg~e~-~qA~~asD~~i~~f~~l~~ 830 (1159)
-.-++||||..+|.-|=+.|+++ +++ .|... ......||+++.++.-+..
T Consensus 125 ~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~ 178 (182)
T d2gmwa1 125 MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQ 178 (182)
T ss_dssp GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHH
T ss_pred cccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHH
Confidence 45689999999999999999985 344 34321 1234569999988665543
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.32 E-value=0.007 Score=60.49 Aligned_cols=41 Identities=12% Similarity=0.233 Sum_probs=35.8
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 670 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~ 670 (1159)
++.+|+.++++.|+ +++++.++|+-....+..+....|+..
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~ 122 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMM 122 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGG
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccc
Confidence 46699999999997 589999999999999999998888753
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.12 E-value=0.025 Score=57.24 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=35.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.||+.++++.|+ +|+++.++|+-..+....+.+.+|+.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~ 139 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIK 139 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCG
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccc
Confidence 46799999999996 68999999998888888888888884
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.70 E-value=0.016 Score=56.90 Aligned_cols=40 Identities=18% Similarity=0.295 Sum_probs=33.0
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
++.+|++++++.|++.|+++.++|+-.. .+..+-...++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~-~~~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCcc-chhhhhhhhccc
Confidence 5679999999999999999999998655 445667777764
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.66 E-value=0.012 Score=59.78 Aligned_cols=44 Identities=23% Similarity=0.373 Sum_probs=33.6
Q ss_pred hHHHHHHHHHhccCcEEEEecC----CccCHHHHHhcc-cceeecCccc
Q 001087 768 QKAQVTSLVKKGARKITLSIGD----GANDVSMIQAAH-IGVGISGQEG 811 (1159)
Q Consensus 768 qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~Ad-VGIgisg~e~ 811 (1159)
.|+.-++.|.+....-|+++|| |.||.+||+.|. .|+++++.|-
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~ 233 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED 233 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH
Confidence 7887777774545678999999 889999999996 6888866554
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.65 E-value=0.045 Score=52.33 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=28.6
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcH-hHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKM-ETAINIAYA 665 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~-eTAi~Ia~~ 665 (1159)
++.||+.++++.|++.|+++.++|+-+. ..+...-..
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~ 83 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLEL 83 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhc
Confidence 5789999999999999999999996443 444443333
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.65 E-value=0.031 Score=57.02 Aligned_cols=40 Identities=23% Similarity=0.354 Sum_probs=35.4
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccc
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 670 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~ 670 (1159)
+-+|+.++++.|++ |++++++|+.........-..+|+..
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~ 149 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS 149 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccc
Confidence 56899999999985 89999999999998889888999853
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=93.89 E-value=0.051 Score=54.95 Aligned_cols=43 Identities=12% Similarity=0.183 Sum_probs=38.0
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCcc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 669 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~ 669 (1159)
.-.+.||+.++++.|++.|+++.++|+............+|+.
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~ 167 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 167 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence 3456899999999999999999999999998888888888874
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=93.51 E-value=0.018 Score=54.06 Aligned_cols=29 Identities=24% Similarity=0.275 Sum_probs=26.9
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDK 655 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~ 655 (1159)
+|++.+++.+.++.|+++|.+|.++||-.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~ 62 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRE 62 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCc
Confidence 57899999999999999999999999864
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=92.80 E-value=0.21 Score=51.02 Aligned_cols=39 Identities=10% Similarity=0.123 Sum_probs=31.9
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 666 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~ 666 (1159)
+++=+++.++|+.|+++|++++.+|+-...+...++..+
T Consensus 17 ~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 17 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 333478899999999999999999998877777776654
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=92.13 E-value=0.66 Score=46.95 Aligned_cols=45 Identities=13% Similarity=0.203 Sum_probs=32.4
Q ss_pred eecccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHH---HHcCcc
Q 001087 625 AIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIA---YACNLI 669 (1159)
Q Consensus 625 ~ieD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia---~~~gl~ 669 (1159)
.-.+++=+++.++|+.|+++|++++.+|+-...+...+. +++|+-
T Consensus 15 ~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 15 MHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp EETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred EECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 344555589999999999999999999965544444443 346663
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=89.95 E-value=0.2 Score=49.64 Aligned_cols=42 Identities=19% Similarity=0.179 Sum_probs=34.4
Q ss_pred cccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccc
Q 001087 627 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 670 (1159)
Q Consensus 627 eD~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~ 670 (1159)
..++-+|+.++++.|++.|+++.++|+.+. +..+-...|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 466889999999999999999999999654 566667777753
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=89.68 E-value=1.3 Score=44.66 Aligned_cols=74 Identities=12% Similarity=0.166 Sum_probs=46.9
Q ss_pred HhhcCCceEEEecChhhHHHHHHHHHhccCcEEEEecCCcc-CHHHHHhccc-ceee-cCc----cchhhhhccceeecc
Q 001087 752 LSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGAN-DVSMIQAAHI-GVGI-SGQ----EGMQAVMASDFAIAQ 824 (1159)
Q Consensus 752 l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g~~vl~iGDG~N-Dv~mL~~AdV-GIgi-sg~----e~~qA~~asD~~i~~ 824 (1159)
-+..++.+.++.=+|+--..+.+.+ .-....++||||..+ |+.+=++|.+ +|.+ +|. +...+....|+++.+
T Consensus 169 ~~~~~~~~~~gKP~p~~~~~al~~l-~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 169 KATRVKPIIIGKPEAVIMNKALDRL-GVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp HHHCCCCEECSTTSHHHHHHHHHHH-TSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESC
T ss_pred ccccceeEEeccCCcccceehhhhc-cccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECC
Confidence 3344555555555666666666666 334567999999976 9999999988 6665 442 211111224898876
Q ss_pred cc
Q 001087 825 FR 826 (1159)
Q Consensus 825 f~ 826 (1159)
+.
T Consensus 248 l~ 249 (253)
T d1wvia_ 248 LA 249 (253)
T ss_dssp GG
T ss_pred HH
Confidence 54
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=88.51 E-value=1.8 Score=43.71 Aligned_cols=42 Identities=19% Similarity=0.155 Sum_probs=31.0
Q ss_pred ccccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHH---HHHcCcc
Q 001087 628 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINI---AYACNLI 669 (1159)
Q Consensus 628 D~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~I---a~~~gl~ 669 (1159)
+++=+++.++|+.|+++|++++++|+....+...+ ....|+-
T Consensus 22 ~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~ 66 (261)
T d1vjra_ 22 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 66 (261)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccc
Confidence 44458999999999999999999997554444444 4456663
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=88.04 E-value=1 Score=44.38 Aligned_cols=25 Identities=36% Similarity=0.442 Sum_probs=23.2
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeC
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTG 653 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTG 653 (1159)
++-+||.++|+.|+++|+++.++|-
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred EecccHHHHHHHHHhhCCeEEEecc
Confidence 3679999999999999999999996
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=86.08 E-value=0.42 Score=46.93 Aligned_cols=45 Identities=20% Similarity=0.243 Sum_probs=34.9
Q ss_pred ccCChHHHHHHHHHcCCeEEEEeCCc----HhHHHHHHHHcCccccCce
Q 001087 630 LQEGVPACIETLARAGIKIWVLTGDK----METAINIAYACNLINNEMK 674 (1159)
Q Consensus 630 lq~~v~etI~~L~~aGIkvwmLTGD~----~eTAi~Ia~~~gl~~~~~~ 674 (1159)
+.+|+.+.++.+++.|++|+.+||-. ..|+.+.-+..|+...++.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~ 135 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMN 135 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCccccc
Confidence 45799999999999999999999953 3466777777787654433
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=83.83 E-value=4.1 Score=39.97 Aligned_cols=163 Identities=20% Similarity=0.202 Sum_probs=91.1
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccccCceEEEEecCCcccchhcccCChHHHHHHHHHHHHHH
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 708 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 708 (1159)
++-||+.++++.++++ ....+++---..-+.++|...|+-- + ...+.-+.+... -++. .++.+.+.
T Consensus 81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~---e-~~~T~~~lD~~~-----~p~e----e~e~ll~i 146 (308)
T d1y8aa1 81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRG---E-LHGTEVDFDSIA-----VPEG----LREELLSI 146 (308)
T ss_dssp CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCS---E-EEEEBCCGGGCC-----CCHH----HHHHHHHH
T ss_pred eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCc---e-eecccccccccC-----CChH----HHHHHHHH
Confidence 3569999999999887 6777777777888999999999942 1 222222211000 0000 11111111
Q ss_pred HHHHHHHhhhhccccCCCceEEEEcccchhHhcchhH-HHHHHHHhhcCCceEEEecChhhHHHHHHHHHhccC-cEEEE
Q 001087 709 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSL-RVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAR-KITLS 786 (1159)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~-~~~~~~l~~~~~~vI~~R~sP~qK~~iV~~lk~~~g-~~vl~ 786 (1159)
.. ...+ -|+..|..+++.-. +-...+++...|+| --..|+.+++..-...+ ...+.
T Consensus 147 ~~-~~~d----------------~~~eel~e~~d~~f~~~e~~~i~e~Vk~V-----Ggg~k~~i~~~~~~~~~~~~~~~ 204 (308)
T d1y8aa1 147 ID-VIAS----------------LSGEELFRKLDELFSRSEVRKIVESVKAV-----GAGEKAKIMRGYCESKGIDFPVV 204 (308)
T ss_dssp HH-HHHH----------------CCHHHHHHHHHHHHHSHHHHHHHHTCBCC-----CHHHHHHHHHHHHHHHTCSSCEE
T ss_pred hh-hccC----------------ccHHHHHHHHHHHhccchHhhHHhhhccc-----CCchhHHHHHhhcccccCCccee
Confidence 11 1000 01122222221111 01223344444444 22567777766533322 33488
Q ss_pred ecCCccCHHHHHhccc--cee--ecCccchhhhhccceeeccccccc
Q 001087 787 IGDGANDVSMIQAAHI--GVG--ISGQEGMQAVMASDFAIAQFRFLT 829 (1159)
Q Consensus 787 iGDG~NDv~mL~~AdV--GIg--isg~e~~qA~~asD~~i~~f~~l~ 829 (1159)
|||...|+.||+.|.= |++ ..|.+- |.+.||+++..-+-..
T Consensus 205 VGDSITDve~Lr~~r~~gGlaIsFNGN~Y--al~eA~VaiiS~~~~a 249 (308)
T d1y8aa1 205 VGDSISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIISPTAMS 249 (308)
T ss_dssp EECSGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEECSSTHH
T ss_pred ccCccccHHHHHHHhcCCCeeEEecCccc--cccccceEEeccchhH
Confidence 9999999999999843 554 478888 9999999998755544
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=82.95 E-value=1.5 Score=42.51 Aligned_cols=42 Identities=19% Similarity=0.302 Sum_probs=36.7
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 670 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~ 670 (1159)
.+.+++.++++.|++.|+++.++|+-...++.......++..
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~ 134 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD 134 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccc
Confidence 467899999999999999999999999888888887777653
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=81.40 E-value=1.1 Score=43.93 Aligned_cols=39 Identities=13% Similarity=0.116 Sum_probs=31.3
Q ss_pred cccCChHHHHHHHHHcCCeEEEEeCCcHhHHHHHHHHcCccc
Q 001087 629 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 670 (1159)
Q Consensus 629 ~lq~~v~etI~~L~~aGIkvwmLTGD~~eTAi~Ia~~~gl~~ 670 (1159)
.+.+|+.+.++.|+ .+..++|+-....+..+-..+|+..
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~ 123 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKP 123 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGG
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhccccccc
Confidence 47788888877664 5667999999999999888888854
|