Citrus Sinensis ID: 001113

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150----

MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEESSKTSKFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGLEGYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCFSAVCIQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKLKKAAITTQCAWRGKVARRELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRVDMEEAKTQENAKLQSALQEMQLQFKESKEKLMKEIEVAKKEAEKVPVVQEVPVIDHAVVEELTSENEKLKTLVSSLEKKIDETEKKFEETSKISEERLKQALEAESKIVQLKTAMHRLEEKVSDMETENQILRQQSLLSTPIKKMSEHISAPATQSLENGHHVIEENISNEPQSATPVKKLGTESDSKLRRSHIEHQHENVDALINCVAKNLGYCNGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENEDDNDHMAYWLSNTSTLLFLLQRSLKAAGASGATPHKKPPTATSLFGRMAMGFRSSPSSANLAAAAALAVVRQVEAKYPALLFKQQLAAYVEKIYGIIRDNLKKELSSLLSLCIQAPRTSKGSVLRSGRSFGKDSASSHWQSIIDSLNTLLSTLKQNFVPPVLVQKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVSPNVISSMRILMTEDSNDATSNSFLLDDNSSIPFSVDDLSNSLQEKDFLDVKAAEELLENPAFEFLYEA

cccHHHHHHHHHccEEEEcccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEHHEEcccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHcccccccccHHHHcccccccHHHHHHHHHHHHccccccccccccccccEEEEEccEEEEccccHHHHccccccHHHHHHHHHccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcHHHHHHHcHHHHHHHHHHHcccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccc

cccHHHHHHHHHccEEEccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccccEEEEEEcccEEEEcHHHHHHccccHHHHHHHHHHccccHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEccccccccccEccHHHHHHHHcccHHEEEEEEcccccccccHHHHHHHHHHHcHHHcccccHHHHHHHHHHHHHcccccEEcccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEcEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccHHHcccHHHHHHHHHHHHHHHHHHcccHccHHHHHHHHcHHccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccEEccccccccccHHHHHHHccccccccccccHHHHHccHHHHHHcc

MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINnsigqdpnsksliGVLDIygfesfktnsFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINwsyiefvdnqDILDLIEKKPGGIIALLdeacmfprsthETFAQKLYQTFKnhkrfskpklarsdftichyagdvtyqtelfldknkDYVVAEHQALLSaskcsfvsslflplaeessktskfssiGSRFKQQLQQLLETlsssephyircvkpnnllkpaifENKNVLQQLRCGGVMEAIRIscagyptrkpfdEFVDRFGILASkvldgssdEVTACKRLLEKvglegyqigKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCFSAVCIQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKLKKAAITTQCAWRGKVARRELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRVDMEEAKTQENAKLQSALQEMQLQFKESKEKLMKEIEVAKKEaekvpvvqevpvIDHAVVEELTSENEKLKTLVSSLEKKIDETEKKFEETSKISEERLKQALEAESKIVQLKTAMHRLEEKVSDMETENQILRQQSllstpikkmsehisapatqslenghhvieenisnepqsatpvkklgtesdsKLRRSHIEHQHENVDALINCVAKnlgycngkpvAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAieneddndhMAYWLSNTSTLLFLLQRSLKaagasgatphkkpptatslfgrmamgfrsspsSANLAAAAALAVVRQVEAKYPALLFKQQLAAYVEKIYGIIRDNLKKELSSLLSLCIqaprtskgsvlrsgrsfgkdsasSHWQSIIDSLNTLLSTlkqnfvppvlVQKIFTQTFSYINVQLFNSLLLRrecctfsngeyvKAGLAELELWCCQAkeeyagssWDELKHIRQAVGFLVIHQKYRISYdeitndlcpilSVQQLYRICTLywddnyntrsvspnVISSMRILMtedsndatsnsfllddnssipfsvddlsnslqekdfLDVKAAEELLenpafeflyea

mcdakaledslckreivtrdetitkwldpeaaavsrDALAKIVYSRLFDWLVEKINnsigqdpnsksLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEESSKTSKFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILAskvldgssdeVTACKRLlekvglegyqigktkvflragQMADLDARrtevlgrsasiiqrkvrsylSRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCFSAVCIQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKLKKAaittqcawrgkVARRELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRVDMEEAKTQENAKLQSALQEMQLQFKESKEKLMKEIEVAKkeaekvpvvqevpvIDHAVVeeltseneklkTLVSSlekkidetekkfeetskiseerlKQALEAESKIVQLKTAMHRLEEkvsdmeteNQILRQQSLLSTPIKKMSEHISAPATQSLENGHHVIEENisnepqsatpvkkLGTESDSKLRRSHIEHQHENVDALINCVAKNLGYCNGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENEDDNDHMAYWLSNTSTLLFLLQRSLKAagasgatphkkppTATSLFGRMAMGFRSSPSSANLAAAAALAVVRQVEAKYPALLFKQQLAAYVEKIYGIIRDNLKKELSSLLSLCIQaprtskgsvlrsgRSFGKDSASSHWQSIIDSLNTLLSTLKQNFVPPVLVQKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYwddnyntrsvSPNVISSMRILMTEDSNDATSNSFLLDDNSSIPFSVDDLSNSLQEKDFLDVKAAEELlenpafeflyea

MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEEssktskfssigsRFKqqlqqlletlsssePHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGLEGYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCFSAVCIQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKLKKAAITTQCAWRGKVARRELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRVDMEEAKTQENAKLQSALQEMQLQFKESKEKLMkeievakkeaekvpvvqevpviDHAVVEELTSENEKLKTLVSSLEKKIDETEKKFEETSKISEERLKQALEAESKIVQLKTAMHRLEEKVSDMETENQILRQQSLLSTPIKKMSEHISAPATQSLENGHHVIEENISNEPQSATPVKKLGTESDSKLRRSHIEHQHENVDALINCVAKNLGYCNGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENEDDNDHMAYWLSNTSTLLFLLQRSLKAAGASGATPHKKPPTATSLFGRMAMGFRsspssanlaaaaalaVVRQVEAKYPALLFKQQLAAYVEKIYGIIRDNLKKElssllslCIQAPRTSKGSVLRSGRSFGKDSASSHWQSIIDSLNTLLSTLKQNFVPPVLVQKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVSPNVISSMRILMTEDSNDATSNSFLLDDNSSIPFSVDDLSNSLQEKDFLDVKAAEELLENPAFEFLYEA

**********LCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPL********************************PHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGLEGYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCFSAVCIQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKLKKAAITTQCAWRGKVARRELRKLK**********************LTWRL*****************************************************PVVQEVPVIDHAVVE*******************************************************************************************************************************************NVDALINCVAKNLGYCNGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENEDDNDHMAYWLSNTSTLLFLLQRSL************************************LAAAAALAVVRQVEAKYPALLFKQQLAAYVEKIYGIIRDNLKKELSSLLSLCIQA**********************HWQSIIDSLNTLLSTLKQNFVPPVLVQKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVSPNVISSMRIL*************************************L*V*****LL***AFEF****

*CDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVS***********************KQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVL******VTACKRLLEKVGLEGYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCFSAVCIQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKLKKAAITTQCAW********************************V******************************************************************************************************************************************************************************************************************************************VAAFTIYKCLLHWKSFEAERTSVFDRLIQ*************HMAYWLSNTSTLLFLL***********************************************AVVRQVEAKYPALLFKQQLAAYVEKIYGIIRDNLKKELS**********************************SIIDSLNTLLSTLKQNFVPPVLVQKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVSPNVIS*******************LDDNSSIPFSVDDLSNSLQEKDFLDVKAAEELLENPAFEFLYEA

********DSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLA*************SRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGLEGYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCFSAVCIQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKLKKAAITTQCAWRGKVARRELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRVDMEEAKTQENAKLQSALQEMQLQFKESKEKLMKEIEVAKKEAEKVPVVQEVPVIDHAVVEELTSENEKLKTLVSSLEKKIDETEKKFEETSKISEERLKQALEAESKIVQLKTAMHRLEEKVSDMETENQILRQQSLLSTPIKKMSEHISAPATQSLENGHHVIEENISNEPQSATPVKKLGTESDSKLRRSHIEHQHENVDALINCVAKNLGYCNGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENEDDNDHMAYWLSNTSTLLFLLQRSLKA************PTATSLFGRMAMGFRSSPSSANLAAAAALAVVRQVEAKYPALLFKQQLAAYVEKIYGIIRDNLKKELSSLLSLCIQAPR*********************WQSIIDSLNTLLSTLKQNFVPPVLVQKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVSPNVISSMRILMTEDSNDATSNSFLLDDNSSIPFSVDDLSNSLQEKDFLDVKAAEELLENPAFEFLYEA

MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLP***********SSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGLEGYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCFSAVCIQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKLKKAAITTQCAWRGKVARRELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRVDMEEAKTQENAKLQSALQEMQLQFKESKEKLMKEIEVAKKEAEKVPVVQEVPVIDHAVVEELTSENEKLKTLVSSLEKKIDETEKKFEETSKISEERLKQALEAESKIVQLKTAMHRLEEKVSDMETENQILRQQSLLS***************************************************RSHIEHQHENVDALINCVAKNLGYCNGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENEDDNDHMAYWLSNTSTLLFLLQRSLKAA*****************F****MGFRSSPSSANLAAAAALAVVRQVEAKYPALLFKQQLAAYVEKIYGIIRDNLKKELSSLLSLCIQAPR******************SSHWQSIIDSLNTLLSTLKQNFVPPVLVQKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVSPNVISSMRILMTEDSNDATSNSFLLDDNSSIPFSVDDLSNSLQEKDFLDVKAAEELLENPAFEFLYEA

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEESSKTSKFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGLEGYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCFSAVCIQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKLKKAAITTQCAWRGKVARRELRKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxPVVQEVPVIDHAVxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSEERLKQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSLLSTPIKKMSEHISAPATQSLENGHHVIEENISNEPQSATPVKKLGTESDSKLRRSHIEHQHENVDALINCVAKNLGYCNGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENEDDNDHMAYWLSNTSTLLFLLQRSLKAAGASGATPHKKPPTATSLFGRMAMGFRSSPSSANLAAAAALAVVRQVEAKYPALLFKQQLAAYVEKIYGIIRDNLKKELSSLLSLCIQAPRTSKGSVLRSGRSFGKDSASSHWQSIIDSLNTLLSTLKQNFVPPVLVQKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVSPNVISSMRILMTEDSNDATSNSFLLDDNSSIPFSVDDLSNSLQEKDFLDVKAAEELLENPAFEFLYEA

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1154	2.2.26 [Sep-21-2011]
P54697		2245	Myosin-J heavy chain OS=D	yes	no	0.495	0.254	0.413	1e-129
Q02440		1829	Unconventional myosin-Va	yes	no	0.589	0.371	0.373	1e-124
Q9Y4I1		1855	Unconventional myosin-Va	yes	no	0.581	0.361	0.372	1e-121
Q99104		1853	Unconventional myosin-Va	yes	no	0.575	0.358	0.375	1e-120
P21271		1818	Unconventional myosin-Vb	no	no	0.472	0.299	0.401	1e-120
Q9QYF3		1828	Unconventional myosin-Va	yes	no	0.573	0.362	0.374	1e-120
Q9ULV0		1848	Unconventional myosin-Vb	no	no	0.597	0.373	0.360	1e-119
P70569		1846	Unconventional myosin-Vb	no	no	0.503	0.314	0.387	1e-117
Q876G9		1568	Myosin-2 OS=Saccharomyces	N/A	no	0.564	0.415	0.358	1e-108
Q875X3		1567	Myosin-2A OS=Naumovozyma	yes	no	0.600	0.442	0.347	1e-107

>sp\|P54697\|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2	Back alignment and function desciption

 Score =  464 bits (1193), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/622 (41%), Positives = 367/622 (59%), Gaps = 50/622 (8%)

Query: 7    LEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNS--IGQDPN 64
            L +S+  R++VT  E+       E A  +RD+L+  +Y  +FDWLV KIN+S  I     
Sbjct: 417  LLNSMLTRKVVTGKESYISHNTKERAENARDSLSMFLYGMMFDWLVVKINSSMSISTQQK 476

Query: 65   SKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIE 124
            SKS IGVLDIYGFESF+ N FEQFCIN  NEKLQQ FNQHVFK EQ+EY KE I+WSYI+
Sbjct: 477  SKSFIGVLDIYGFESFEVNGFEQFCINYANEKLQQLFNQHVFKEEQQEYIKEKIDWSYID 536

Query: 125  FVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDF 184
            F DNQD LDLIEKKP  I+ LLDE  MFP++T +T A KLY    +H +F KP+ + + F
Sbjct: 537  FNDNQDTLDLIEKKPICILTLLDEETMFPKATPQTLATKLYSKMTSHSKFEKPRFSSTAF 596

Query: 185  TICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFL--------------- 229
            TI HYAG VTY+T+ FLDKNKD+++ E  ++L  S  SF+  L                 
Sbjct: 597  TINHYAGKVTYETDQFLDKNKDFIIPEQISILQRSNFSFIKVLMSHSDKFTQSPGGHPQG 656

Query: 230  ---PLAEESSKTS-----KFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIF 281
               P +  +  TS     KF S+GS+F   L  L++T+S++ PHY+RC+KPN    P  F
Sbjct: 657  NGGPTSSNTKGTSGSSSMKFLSVGSQFSTSLATLMKTISTTTPHYVRCIKPNPEKLPQTF 716

Query: 282  ENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVDRFGILASKVLDGSS---------- 331
              ++V+ QLRCGGVME++RI CAG+PTR+   EF  R+ IL  K ++  S          
Sbjct: 717  NKQDVIHQLRCGGVMESVRICCAGFPTRRLLSEFYQRYKILYVKDINTGSGGGKKGSNNN 776

Query: 332  ---DEVTACKRLLEKVGL--EGYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVR 386
               D     + LL  + L  + Y+IG TKVFLRAGQ+A L+  R E L RSA++IQ++ +
Sbjct: 777  KIKDPKILVQNLLTGIELSDDKYKIGLTKVFLRAGQLASLEDMRLEQLDRSATVIQKRWK 836

Query: 387  SYLSRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMC 446
             YL RK Y  LR +++ IQ   R   A+    +++R  S + IQ+  R +  +  Y+ + 
Sbjct: 837  GYLYRKRYKQLRDASLIIQTKLRSVHAKQQLSALQRTHSAILIQKVWRAHRDRVQYQKIR 896

Query: 447  FSAVCIQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKLKKAAITTQCAWRG 506
             +++ +QT MR      ++   R   A+I++Q+  R+ L++    K  +  I  Q  WR 
Sbjct: 897  DASLQLQTVMRRHLFSEQVHRERCENAAIILQTKIRQILSKREVDKKLRGIILIQARWRM 956

Query: 507  KVARRELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRVDMEEAKTQ------ 560
            K+A+R   +L+  AR    +Q  KNKL++++EEL WRL  E + +  +E+ K +      
Sbjct: 957  KLAKRVYIQLRAEARSLRTVQEQKNKLQEKLEELQWRLTSEAKRKQQLEDQKVKSDTTIS 1016

Query: 561  ----ENAKLQSALQEMQLQFKE 578
                 N  L+  L E+QL+++E
Sbjct: 1017 ELSSNNDHLELQLSEIQLKYQE 1038

Processive motor protein that can move over long distances along F-actin without disassociating; processiveness depends on high physiological Mg(2+) concentrations. Presents a high actin affinity in the presence of ADP, fast ATP hydrolysis, and a high steady-state ATPase activity in the presence of actin that is rate limited by ADP release. Physiological decrease of free Mg(2+) ions leads to an increased rate of ADP release and shortening of the fraction of time it spends in the strong acting binding states.
Dictyostelium discoideum (taxid: 44689)

>sp\|Q02440\|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1	Back alignment and function description

>sp\|Q9Y4I1\|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2	Back alignment and function description

>sp\|Q99104\|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2	Back alignment and function description

>sp\|P21271\|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2	Back alignment and function description

>sp\|Q9QYF3\|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1	Back alignment and function description

>sp\|Q9ULV0\|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3	Back alignment and function description

>sp\|P70569\|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1	Back alignment and function description

>sp\|Q876G9\|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2	Back alignment and function description

>sp\|Q875X3\|MYO2A_NAUCC Myosin-2A OS=Naumovozyma castellii (strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630) GN=MYO2A PE=3 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1154
224070005		1513	predicted protein [Populus trichocarpa]	0.998	0.761	0.882	0.0
356545924		1549	PREDICTED: myosin-J heavy chain-like [Gl	0.997	0.743	0.836	0.0
225437918		1518	PREDICTED: myosin-H heavy chain [Vitis v	0.996	0.757	0.838	0.0
297744256		1540	unnamed protein product [Vitis vinifera]	0.996	0.746	0.838	0.0
356536864		1611	PREDICTED: myosin-J heavy chain-like [Gl	0.990	0.709	0.835	0.0
116047943		1512	myosin XI-2 [Nicotiana benthamiana]	0.996	0.760	0.827	0.0
29170491		1362	myosin XI [Nicotiana tabacum]	0.990	0.839	0.819	0.0
356505090		1519	PREDICTED: myosin-Va-like [Glycine max]	0.994	0.755	0.816	0.0
356572313		1527	PREDICTED: myosin-H heavy chain-like [Gl	0.996	0.753	0.814	0.0
449445648		1508	PREDICTED: myosin-H heavy chain-like [Cu	0.991	0.758	0.808	0.0

>gi\|224070005\|ref\|XP_002303100.1\| predicted protein [Populus trichocarpa] gi\|222844826\|gb\|EEE82373.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 2109 bits (5465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1017/1153 (88%), Positives = 1091/1153 (94%), Gaps = 1/1153 (0%)

Query: 1    MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIG 60
            MCD+KALEDSLCKR IVTRDETITKWLDPE+AAVSRDALAK+VYSRLFDWLV+KIN+SIG
Sbjct: 362  MCDSKALEDSLCKRVIVTRDETITKWLDPESAAVSRDALAKVVYSRLFDWLVDKINSSIG 421

Query: 61   QDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINW 120
            QDP+SK LIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEY+KE I+W
Sbjct: 422  QDPHSKYLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDW 481

Query: 121  SYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLA 180
            SYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRF+KPKLA
Sbjct: 482  SYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFAKPKLA 541

Query: 181  RSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEESSKTSK 240
            RSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQAL+ ASKCSFVS LF PLAEESSK SK
Sbjct: 542  RSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALMGASKCSFVSGLFPPLAEESSKQSK 601

Query: 241  FSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIR 300
            FSSIGSRFKQQLQ LLETLS++EPHYIRCVKPNNLLKPAIFENKN LQQLRCGGVMEAIR
Sbjct: 602  FSSIGSRFKQQLQALLETLSATEPHYIRCVKPNNLLKPAIFENKNALQQLRCGGVMEAIR 661

Query: 301  ISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGLEGYQIGKTKVFLRA 360
            ISCAG+PTRK FDEFVDRFG+LA +VLDGSSDEVTACKRLLEKVGL GYQIGKTKVFLRA
Sbjct: 662  ISCAGFPTRKTFDEFVDRFGLLAPEVLDGSSDEVTACKRLLEKVGLTGYQIGKTKVFLRA 721

Query: 361  GQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESM 420
            GQMA+LDARR+EVLGRSASIIQRKVRSYLSR+++I LRRSAI IQ+ACRGQ+AR VYE+M
Sbjct: 722  GQMAELDARRSEVLGRSASIIQRKVRSYLSRRSFITLRRSAIQIQSACRGQIARHVYENM 781

Query: 421  RREASCLRIQRDLRMYLAKKAYKDMCFSAVCIQTGMRGMAARNELRFRRQTRASILIQSH 480
            RREA+ LRIQRDLRMY+A+KAYKD+C+SA+ IQTGMRGMAAR++LRFRRQTRA+I+IQS 
Sbjct: 782  RREAASLRIQRDLRMYIARKAYKDLCYSAISIQTGMRGMAARDDLRFRRQTRAAIMIQSQ 841

Query: 481  CRKYLARLHYMKLKKAAITTQCAWRGKVARRELRKLKMAARETGALQAAKNKLEKQVEEL 540
            CRKYLARLHY KLKKAAITTQCAWRG+VAR+ELR LKMAARETGALQAAKNKLEKQVEEL
Sbjct: 842  CRKYLARLHYKKLKKAAITTQCAWRGRVARKELRNLKMAARETGALQAAKNKLEKQVEEL 901

Query: 541  TWRLQLEKRMRVDMEEAKTQENAKLQSALQEMQLQFKESKEKLMKEIEVAKKEAEKVPVV 600
            TWRLQLEKRMR D+EEAKTQENAKLQSALQEMQLQFKE+KE L+KE E A K  EKVPV+
Sbjct: 902  TWRLQLEKRMRADVEEAKTQENAKLQSALQEMQLQFKETKEMLVKEREAAIKVTEKVPVI 961

Query: 601  QEVPVIDHAVVEELTSENEKLKTLVSSLEKKIDETEKKFEETSKISEERLKQALEAESKI 660
            QEVPV+DH  +E+LT ENEKLK LV+SLEKKIDETEKKFEETS+ISEERLKQALEAESKI
Sbjct: 962  QEVPVVDHVALEKLTIENEKLKALVTSLEKKIDETEKKFEETSRISEERLKQALEAESKI 1021

Query: 661  VQLKTAMHRLEEKVSDMETENQILRQQSLLSTPIKKMSEHISAPATQSLENGHHVIEENI 720
            V+LKTAMHRLEEK SD+ETENQ+LRQQ LL TP KK+SE    P TQSLENGHH+ +EN 
Sbjct: 1022 VELKTAMHRLEEKFSDIETENQVLRQQGLLQTPAKKLSERPPIPPTQSLENGHHLNDENK 1081

Query: 721  SNEPQSATPVKKLGTESDSKLRRSHIEHQHENVDALINCVAKNLGYCNGKPVAAFTIYKC 780
            +NEPQSATPVK  GTESDSK RRSHIE QHEN+DALI+CV  N+G+ +GKPVAA TIY+C
Sbjct: 1082 ANEPQSATPVKTYGTESDSKFRRSHIERQHENIDALISCVTNNIGFSHGKPVAALTIYRC 1141

Query: 781  LLHWKSFEAERTSVFDRLIQMIGSAIENEDDNDHMAYWLSNTSTLLFLLQRSLKAAGASG 840
            LLHWKSFEAERTSVFDRLIQMIGSAIENE++N+HMAYWLSNTSTLLFLLQRS+KAAGAS 
Sbjct: 1142 LLHWKSFEAERTSVFDRLIQMIGSAIENEENNEHMAYWLSNTSTLLFLLQRSIKAAGAS- 1200

Query: 841  ATPHKKPPTATSLFGRMAMGFRSSPSSANLAAAAALAVVRQVEAKYPALLFKQQLAAYVE 900
            ATP +KPP+ATSLFGRM MGFRSSPSS+NLAAAAALAVVRQVEAKYPALLFKQQLAAYVE
Sbjct: 1201 ATPQRKPPSATSLFGRMTMGFRSSPSSSNLAAAAALAVVRQVEAKYPALLFKQQLAAYVE 1260

Query: 901  KIYGIIRDNLKKELSSLLSLCIQAPRTSKGSVLRSGRSFGKDSASSHWQSIIDSLNTLLS 960
            KIYGIIRDNLKKEL+SLLSLCIQAPRTSKGSVLRSGRSFGKDS  SHWQSI+DSLNTLLS
Sbjct: 1261 KIYGIIRDNLKKELASLLSLCIQAPRTSKGSVLRSGRSFGKDSPLSHWQSIVDSLNTLLS 1320

Query: 961  TLKQNFVPPVLVQKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQA 1020
            TLKQNFVPPVL+QKI+TQTFSYINVQLFNSLLLRRECCTFSNGEYVK+GLAELELW  QA
Sbjct: 1321 TLKQNFVPPVLIQKIYTQTFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELELWSAQA 1380

Query: 1021 KEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNY 1080
            KEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNY
Sbjct: 1381 KEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNY 1440

Query: 1081 NTRSVSPNVISSMRILMTEDSNDATSNSFLLDDNSSIPFSVDDLSNSLQEKDFLDVKAAE 1140
            NTRSVSP VISSMR+LMTEDSN A SNSFLLDDNS IPFSVDDLSNSLQEKDF+DV+ AE
Sbjct: 1441 NTRSVSPGVISSMRVLMTEDSNSAVSNSFLLDDNSGIPFSVDDLSNSLQEKDFMDVQPAE 1500

Query: 1141 ELLENPAFEFLYE 1153
            ELLENPAF+FL+E
Sbjct: 1501 ELLENPAFQFLHE 1513

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|356545924\|ref\|XP_003541383.1\| PREDICTED: myosin-J heavy chain-like [Glycine max]	Back alignment and taxonomy information

>gi\|225437918\|ref\|XP_002268099.1\| PREDICTED: myosin-H heavy chain [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297744256\|emb\|CBI37226.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356536864\|ref\|XP_003536953.1\| PREDICTED: myosin-J heavy chain-like [Glycine max]	Back alignment and taxonomy information

>gi\|116047943\|gb\|ABJ53197.1\| myosin XI-2 [Nicotiana benthamiana]	Back alignment and taxonomy information

>gi\|29170491\|dbj\|BAC66162.1\| myosin XI [Nicotiana tabacum]	Back alignment and taxonomy information

>gi\|356505090\|ref\|XP_003521325.1\| PREDICTED: myosin-Va-like [Glycine max]	Back alignment and taxonomy information

>gi\|356572313\|ref\|XP_003554313.1\| PREDICTED: myosin-H heavy chain-like [Glycine max]	Back alignment and taxonomy information

>gi\|449445648\|ref\|XP_004140584.1\| PREDICTED: myosin-H heavy chain-like [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1154
TAIR\|locus:2020270		1500	XIB "myosin XI B" [Arabidopsis	0.986	0.758	0.713	0.0
TAIR\|locus:2117768		1516	XIH [Arabidopsis thaliana (tax	0.989	0.753	0.684	0.0
TAIR\|locus:2199449		1529	XIE [Arabidopsis thaliana (tax	0.997	0.752	0.578	0.0
TAIR\|locus:2025535		1538	XIC [Arabidopsis thaliana (tax	0.997	0.748	0.574	0.0
TAIR\|locus:2149932		1545	XIK [Arabidopsis thaliana (tax	0.992	0.741	0.575	0.0
TAIR\|locus:2007938		1520	MYA1 "myosin 1" [Arabidopsis t	0.989	0.751	0.540	0.0
TAIR\|locus:2039007		1493	XIG "myosin-like protein XIG"	0.739	0.571	0.647	0.0
TAIR\|locus:2046570		1770	XID "myosin XI D" [Arabidopsis	0.620	0.404	0.612	4.4e-297
TAIR\|locus:2197773		1730	XIA "myosin XI A" [Arabidopsis	0.692	0.461	0.562	2e-292
TAIR\|locus:2125929		1522	XI-I [Arabidopsis thaliana (ta	0.963	0.730	0.487	2.2e-286

TAIR\|locus:2020270 XIB "myosin XI B" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 4228 (1493.4 bits), Expect = 0., P = 0.
 Identities = 822/1152 (71%), Positives = 940/1152 (81%)

Query:     1 MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIG 60
             MC+ K+LEDSLCKR + TRDETITK LDPEAA +SRDALAK++YSRLFDWLVEKIN SIG
Sbjct:   363 MCNEKSLEDSLCKRIMATRDETITKTLDPEAALLSRDALAKVMYSRLFDWLVEKINTSIG 422

Query:    61 QDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINW 120
             QDP+SK LIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEY KE INW
Sbjct:   423 QDPDSKYLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEINW 482

Query:   121 SYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLA 180
             SYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQT+KNHKRF+KPKLA
Sbjct:   483 SYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTYKNHKRFTKPKLA 542

Query:   181 RSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEEXXXXXX 240
             RSDFTICHYAGDVTYQTELFLDKNKDYV+AEHQALL+AS CSFV++LF P++++      
Sbjct:   543 RSDFTICHYAGDVTYQTELFLDKNKDYVIAEHQALLNASTCSFVANLFPPVSDDSKQSKF 602

Query:   241 XXXXXXRFKXXXXXXXXXXXXXXPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIR 300
                   RFK              PHYIRC+KPNNLLKP IFEN+NVLQQLRCGGVMEAIR
Sbjct:   603 SSIGT-RFKQQLVSLLEILNTTEPHYIRCIKPNNLLKPGIFENQNVLQQLRCGGVMEAIR 661

Query:   301 ISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGLEGYQIGKTKVFLRA 360
             ISCAGYPTRK FDEF++RFGI+A +VLD +S+E  ACK+LL+K GLEGYQIGK+KVFLRA
Sbjct:   662 ISCAGYPTRKHFDEFLNRFGIIAPQVLDKNSNEPAACKKLLDKAGLEGYQIGKSKVFLRA 721

Query:   361 GQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESM 420
             GQMADLD RRTE+LGRSASIIQRKVRSYL++K +I LR SA  IQA CRG LAR++YE M
Sbjct:   722 GQMADLDTRRTEILGRSASIIQRKVRSYLAQKTFIQLRISATQIQAVCRGYLARSIYEGM 781

Query:   421 RREASCLRIQRDLRMYLAKKAYKDMCFSAVCIQTGMRGMAARNELRFRRQTRASILIQSH 480
             RREA+ L+IQRDLR +LA+KAY ++  + + IQ GMRGM +R EL  RRQT+A+ +IQ+ 
Sbjct:   782 RREAAALKIQRDLRKFLARKAYTELFSATILIQAGMRGMVSRKELCLRRQTKAATIIQTR 841

Query:   481 CRKYLARLHYMKLKKAAITTQCAWRGKVARRELRKLKMAARETGALQAAKNKLEKQVEEL 540
             CR YLARLHY KLKKAAITTQCAWRGKVAR+EL+ LKMAARETGALQ AKNKLEKQVEEL
Sbjct:   842 CRVYLARLHYRKLKKAAITTQCAWRGKVARKELKNLKMAARETGALQEAKNKLEKQVEEL 901

Query:   541 TWRLQLEKRMRVDMEEAKTQENAKLQSALQEMQLQFKESKEKLMXXXXXXXXXXXXXXXX 600
             TWRLQLEKRMR D+EEAK QENAK +S+L+E+Q +FKE++  L+                
Sbjct:   902 TWRLQLEKRMRTDLEEAKKQENAKYESSLEEIQNKFKETEALLIKEREAAKTVSEVLPII 961

Query:   601 XXXXXXDHAVVEELTSENEKLKTLVSSLEKKIDETEKKFEETSKISEERLKQALEAESKI 660
                   D  ++E+LT+ENEKLK +VSSLE KIDET K+  ET++IS++RLKQAL AESK+
Sbjct:   962 KEVPVVDQELMEKLTNENEKLKGMVSSLEIKIDETAKELHETARISQDRLKQALAAESKV 1021

Query:   661 VQLKTAMHRLEEKVSDMETENQILRQQSLLSTPIKKMSEHISAPATQSLENGHHVIEENI 720
              +LKTAM RLEEK+SDMETE QI+ QQ++L+TP+K ++ H      ++LENGH    EN 
Sbjct:  1022 AKLKTAMQRLEEKISDMETEKQIMLQQTILNTPVKSVAGHPPTATIKNLENGHRTNLENQ 1081

Query:   721 SNEPQSATPVKKLGTESDSKLRRSHIEHQHENVDALINCVAKNLGYCNGKPVAAFTIYKC 780
              NE            E +    +S  E Q ENVD LI+CV +N+G+ NGKP+AAFTIYKC
Sbjct:  1082 FNE-----------VEVNGNAGKSAAERQLENVDTLIDCVKENIGFSNGKPIAAFTIYKC 1130

Query:   781 LLHWKSFEAERTSVFDRLIQMIGSAIENEDDNDHMAYWLSNTSTLLFLLQRSLKAAGASG 840
             LLHWK FE+E+TS FDRLI+MIGSAIENEDDN H+AYWL+NTS LLFLLQ+SLK AGA G
Sbjct:  1131 LLHWKCFESEKTSAFDRLIEMIGSAIENEDDNGHLAYWLTNTSALLFLLQKSLKPAGA-G 1189

Query:   841 ATPHKKPPTATSLFGRMAMGFRXXXXXXXXXXXXXXXVVRQVEAKYPALLFKQQLAAYVE 900
             AT  KKPP  TSLFGRMA+ FR               V+R VEAKYPALLFKQQLAAYVE
Sbjct:  1190 ATASKKPPITTSLFGRMALSFRSSPNLAAAAEAAALAVIRPVEAKYPALLFKQQLAAYVE 1249

Query:   901 KIYGIIRDNLKKEXXXXXXXCIQAPRTSKGSVLRSGRSFGKDSASSHWQSIIDSLNTLLS 960
             KI+G+IRDNLKKE       CIQAPR SKG + RS RS GKDS + HWQSIID LN+LL+
Sbjct:  1250 KIFGMIRDNLKKELSALISMCIQAPRISKGGIQRSARSLGKDSPAIHWQSIIDGLNSLLA 1309

Query:   961 TLKQNFVPPVLVQKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQA 1020
              LK N+VP VL+QKI TQTFS++NVQLFNSLLLR+ECCTFSNGE+VK+GLAELELWC Q 
Sbjct:  1310 ILKDNYVPLVLIQKIHTQTFSFVNVQLFNSLLLRKECCTFSNGEFVKSGLAELELWCGQV 1369

Query:  1021 KEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNY 1080
              E YAG SWDELKHIRQAVGFLVIHQKYR+SYD+I +DLCPILSVQQLYRICTLYWDD Y
Sbjct:  1370 NE-YAGPSWDELKHIRQAVGFLVIHQKYRVSYDDIVHDLCPILSVQQLYRICTLYWDDCY 1428

Query:  1081 NTRSVSPNVISSMRILMTEDSNDATSNSFLLDDNSSIPFSVDDLSNSLQEKDFLDVKAAE 1140
             NTRSVS  VISSMR LMTE+SNDA SNSFLLDDNSSIPFS+D++SNS+ EKDF  VK A+
Sbjct:  1429 NTRSVSQEVISSMRALMTEESNDADSNSFLLDDNSSIPFSIDEISNSMHEKDFASVKPAK 1488

Query:  1141 ELLENPAFEFLY 1152
             ELLENP F FL+
Sbjct:  1489 ELLENPEFVFLH 1500

GO:0003774 "motor activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016459 "myosin complex" evidence=IEA

GO:0030048 "actin filament-based movement" evidence=RCA;TAS

GO:0048767 "root hair elongation" evidence=IGI

GO:0051645 "Golgi localization" evidence=RCA

GO:0051646 "mitochondrion localization" evidence=RCA

GO:0060151 "peroxisome localization" evidence=RCA

TAIR\|locus:2117768 XIH [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2199449 XIE [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2025535 XIC [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2149932 XIK [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2007938 MYA1 "myosin 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2039007 XIG "myosin-like protein XIG" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2046570 XID "myosin XI D" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2197773 XIA "myosin XI A" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2125929 XI-I [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1154
cd01384		674	cd01384, MYSc_type_XI, Myosin motor domain, plant-	0.0
smart00242		677	smart00242, MYSc, Myosin	0.0
cd00124		679	cd00124, MYSc, Myosin motor domain	1e-159
COG5022		1463	COG5022, COG5022, Myosin heavy chain [Cytoskeleton	1e-156
cd01380		691	cd01380, MYSc_type_V, Myosin motor domain, type V	1e-145
pfam00063		679	pfam00063, Myosin_head, Myosin head (motor domain)	1e-137
cd01377		693	cd01377, MYSc_type_II, Myosin motor domain, type I	1e-132
cd01378		674	cd01378, MYSc_type_I, Myosin motor domain, type I	1e-124
cd01381		671	cd01381, MYSc_type_VII, Myosin motor domain, type	1e-119
cd01383		677	cd01383, MYSc_type_VIII, Myosin motor domain, plan	1e-108
cd01382		717	cd01382, MYSc_type_VI, Myosin motor domain, type V	2e-88
cd01385		692	cd01385, MYSc_type_IX, Myosin motor domain, type I	3e-85
cd01379		653	cd01379, MYSc_type_III, Myosin motor domain, type	1e-84
cd01387		677	cd01387, MYSc_type_XV, Myosin motor domain, type X	2e-84
PTZ00014		821	PTZ00014, PTZ00014, myosin-A; Provisional	6e-77
pfam01843		105	pfam01843, DIL, DIL domain	9e-43
cd01386		767	cd01386, MYSc_type_XVIII, Myosin motor domain, typ	5e-20
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-08
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	5e-08
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	6e-06
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	7e-06
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-05
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	1e-05
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	3e-05
PRK12704		520	PRK12704, PRK12704, phosphodiesterase; Provisional	3e-05
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	8e-05
PTZ00121		2084	PTZ00121, PTZ00121, MAEBL; Provisional	8e-05
pfam01576		859	pfam01576, Myosin_tail_1, Myosin tail	1e-04
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	2e-04
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	3e-04
COG1340		294	COG1340, COG1340, Uncharacterized archaeal coiled-	3e-04
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	4e-04
COG2433		652	COG2433, COG2433, Uncharacterized conserved protei	5e-04
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	5e-04
PTZ00121		2084	PTZ00121, PTZ00121, MAEBL; Provisional	0.001
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	0.001
PRK03918		880	PRK03918, PRK03918, chromosome segregation protein	0.001
TIGR01069		771	TIGR01069, mutS2, MutS2 family protein	0.001
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	0.002
PRK03918		880	PRK03918, PRK03918, chromosome segregation protein	0.002
PRK02224		880	PRK02224, PRK02224, chromosome segregation protein	0.002
pfam07926		132	pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein	0.002
COG4372		499	COG4372, COG4372, Uncharacterized protein conserve	0.002
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.003
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	0.003
PRK03918		880	PRK03918, PRK03918, chromosome segregation protein	0.003
pfam05262		489	pfam05262, Borrelia_P83, Borrelia P83/100 protein	0.003
pfam07888		546	pfam07888, CALCOCO1, Calcium binding and coiled-co	0.003
pfam09731		493	pfam09731, Mitofilin, Mitochondrial inner membrane	0.003
pfam05557		722	pfam05557, MAD, Mitotic checkpoint protein	0.004

>gnl\|CDD\|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport	Back alignment and domain information

 Score =  786 bits (2032), Expect = 0.0
 Identities = 312/374 (83%), Positives = 350/374 (93%)

Query: 1   MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIG 60
           MCD KALED+LCKR +VT +E ITK LDP++A +SRDALAK +YSRLFDWLV KIN+SIG
Sbjct: 301 MCDEKALEDALCKRVMVTPEEVITKPLDPDSAELSRDALAKTIYSRLFDWLVNKINSSIG 360

Query: 61  QDPNSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINW 120
           QDP+SKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEY+KE I+W
Sbjct: 361 QDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDW 420

Query: 121 SYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLA 180
           SYIEFVDNQD+LDLIEKKPGGIIALLDEACMFP+STHETFAQKLYQTFK+HKRF KPKL+
Sbjct: 421 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKDHKRFEKPKLS 480

Query: 181 RSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEESSKTSK 240
           R+ FTI HYAGDVTYQT+ FLDKNKDYVVAEHQALL+AS CSFV+ LF PL EE+SK+SK
Sbjct: 481 RTAFTIDHYAGDVTYQTDQFLDKNKDYVVAEHQALLNASNCSFVAGLFPPLPEETSKSSK 540

Query: 241 FSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIR 300
           FSSIGSRFKQQLQ L+ETLS++EPHYIRC+KPNN+LKP IFEN+NVLQQLRCGGV+EAIR
Sbjct: 541 FSSIGSRFKQQLQSLMETLSTTEPHYIRCIKPNNVLKPGIFENENVLQQLRCGGVLEAIR 600

Query: 301 ISCAGYPTRKPFDEFVDRFGILASKVLDGSSDEVTACKRLLEKVGLEGYQIGKTKVFLRA 360
           ISCAGYPTR+ FDEF+DRFGILA +VL GSSD+  ACK++L+K+GL+GYQIGKTKVFLRA
Sbjct: 601 ISCAGYPTRRTFDEFLDRFGILAPEVLKGSSDDKAACKKILDKMGLKGYQIGKTKVFLRA 660

Query: 361 GQMADLDARRTEVL 374
           GQMA+LDARRTEVL
Sbjct: 661 GQMAELDARRTEVL 674

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674

>gnl\|CDD\|214580 smart00242, MYSc, Myosin	Back alignment and domain information

>gnl\|CDD\|238071 cd00124, MYSc, Myosin motor domain	Back alignment and domain information

>gnl\|CDD\|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton]	Back alignment and domain information

>gnl\|CDD\|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins	Back alignment and domain information

>gnl\|CDD\|215687 pfam00063, Myosin_head, Myosin head (motor domain)	Back alignment and domain information

>gnl\|CDD\|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins	Back alignment and domain information

>gnl\|CDD\|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins	Back alignment and domain information

>gnl\|CDD\|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins	Back alignment and domain information

>gnl\|CDD\|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata	Back alignment and domain information

>gnl\|CDD\|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins	Back alignment and domain information

>gnl\|CDD\|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins	Back alignment and domain information

>gnl\|CDD\|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins	Back alignment and domain information

>gnl\|CDD\|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins	Back alignment and domain information

>gnl\|CDD\|240229 PTZ00014, PTZ00014, myosin-A; Provisional	Back alignment and domain information

>gnl\|CDD\|216736 pfam01843, DIL, DIL domain	Back alignment and domain information

>gnl\|CDD\|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|237177 PRK12704, PRK12704, phosphodiesterase; Provisional	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|173412 PTZ00121, PTZ00121, MAEBL; Provisional	Back alignment and domain information

>gnl\|CDD\|144972 pfam01576, Myosin_tail_1, Myosin tail	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein [Function unknown]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|225288 COG2433, COG2433, Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|173412 PTZ00121, PTZ00121, MAEBL; Provisional	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|130141 TIGR01069, mutS2, MutS2 family protein	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|149160 pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein	Back alignment and domain information

>gnl\|CDD\|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|114011 pfam05262, Borrelia_P83, Borrelia P83/100 protein	Back alignment and domain information

>gnl\|CDD\|116500 pfam07888, CALCOCO1, Calcium binding and coiled-coil domain (CALCOCO1) like	Back alignment and domain information

>gnl\|CDD\|220369 pfam09731, Mitofilin, Mitochondrial inner membrane protein	Back alignment and domain information

>gnl\|CDD\|218636 pfam05557, MAD, Mitotic checkpoint protein	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1154
COG5022		1463	Myosin heavy chain [Cytoskeleton]	100.0
PTZ00014		821	myosin-A; Provisional	100.0
KOG0160		862	consensus Myosin class V heavy chain [Cytoskeleton	100.0
KOG0161		1930	consensus Myosin class II heavy chain [Cytoskeleto	100.0
cd01384		674	MYSc_type_XI Myosin motor domain, plant-specific t	100.0
KOG0164		1001	consensus Myosin class I heavy chain [Cytoskeleton	100.0
cd01380		691	MYSc_type_V Myosin motor domain, type V myosins. M	100.0
cd01381		671	MYSc_type_VII Myosin motor domain, type VII myosin	100.0
cd01377		693	MYSc_type_II Myosin motor domain, type II myosins.	100.0
cd01378		674	MYSc_type_I Myosin motor domain, type I myosins. M	100.0
cd01387		677	MYSc_type_XV Myosin motor domain, type XV myosins.	100.0
cd01383		677	MYSc_type_VIII Myosin motor domain, plant-specific	100.0
cd01385		692	MYSc_type_IX Myosin motor domain, type IX myosins.	100.0
cd01382		717	MYSc_type_VI Myosin motor domain, type VI myosins.	100.0
cd01379		653	MYSc_type_III Myosin motor domain, type III myosin	100.0
smart00242		677	MYSc Myosin. Large ATPases. ATPase; molecular moto	100.0
cd00124		679	MYSc Myosin motor domain. This catalytic (head) do	100.0
KOG0162		1106	consensus Myosin class I heavy chain [Cytoskeleton	100.0
cd01386		767	MYSc_type_XVIII Myosin motor domain, type XVIII my	100.0
KOG0163		1259	consensus Myosin class VI heavy chain [Cytoskeleto	100.0
PF00063		689	Myosin_head: Myosin head (motor domain); InterPro:	100.0
KOG4229		1062	consensus Myosin VII, myosin IXB and related myosi	100.0
KOG1892		1629	consensus Actin filament-binding protein Afadin [C	99.97
PF01843		105	DIL: DIL domain; InterPro: IPR018444 Dilute encode	99.95
KOG0161		1930	consensus Myosin class II heavy chain [Cytoskeleto	99.24
KOG0160		862	consensus Myosin class V heavy chain [Cytoskeleton	98.4
KOG0520		975	consensus Uncharacterized conserved protein, conta	98.29
COG5022		1463	Myosin heavy chain [Cytoskeleton]	98.16
KOG0520		975	consensus Uncharacterized conserved protein, conta	97.95
KOG0971		1243	consensus Microtubule-associated protein dynactin	97.87
KOG1029		1118	consensus Endocytic adaptor protein intersectin [S	97.67
KOG1029		1118	consensus Endocytic adaptor protein intersectin [S	97.58
PF09726		697	Macoilin: Transmembrane protein; InterPro: IPR0191	97.43
KOG0996		1293	consensus Structural maintenance of chromosome pro	97.38
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	97.33
PF12718		143	Tropomyosin_1: Tropomyosin like; InterPro: IPR0005	97.27
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	97.2
PRK11637		428	AmiB activator; Provisional	97.2
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	97.14
KOG4229		1062	consensus Myosin VII, myosin IXB and related myosi	97.09
PF00612		21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.03
PF09726		697	Macoilin: Transmembrane protein; InterPro: IPR0191	97.0
KOG0164		1001	consensus Myosin class I heavy chain [Cytoskeleton	96.97
COG1579		239	Zn-ribbon protein, possibly nucleic acid-binding [	96.93
PRK04863		1486	mukB cell division protein MukB; Provisional	96.93
PRK11637		428	AmiB activator; Provisional	96.92
KOG0933		1174	consensus Structural maintenance of chromosome pro	96.88
KOG0996		1293	consensus Structural maintenance of chromosome pro	96.87
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	96.81
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	96.73
KOG1853		333	consensus LIS1-interacting protein NUDE [Cytoskele	96.7
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	96.6
PF00261		237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	96.52
KOG0933		1174	consensus Structural maintenance of chromosome pro	96.51
KOG0971		1243	consensus Microtubule-associated protein dynactin	96.46
PF07888		546	CALCOCO1: Calcium binding and coiled-coil domain (	96.45
PRK02224		880	chromosome segregation protein; Provisional	96.43
COG4942		420	Membrane-bound metallopeptidase [Cell division and	96.38
PF14662		193	CCDC155: Coiled-coil region of CCDC155	96.37
PF07888		546	CALCOCO1: Calcium binding and coiled-coil domain (	96.36
PF12718		143	Tropomyosin_1: Tropomyosin like; InterPro: IPR0005	96.34
KOG2128		1401	consensus Ras GTPase-activating protein family - I	96.33
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	96.33
PF00261		237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	96.28
PRK02224		880	chromosome segregation protein; Provisional	96.27
PF08317		325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	96.22
PF00612		21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	96.18
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	96.07
PRK09039		343	hypothetical protein; Validated	96.04
KOG0163		1259	consensus Myosin class VI heavy chain [Cytoskeleto	96.03
KOG4643		1195	consensus Uncharacterized coiled-coil protein [Fun	95.99
PHA02562		562	46 endonuclease subunit; Provisional	95.93
PF14662		193	CCDC155: Coiled-coil region of CCDC155	95.91
PRK03918		880	chromosome segregation protein; Provisional	95.9
KOG4673		961	consensus Transcription factor TMF, TATA element m	95.88
PRK04863		1486	mukB cell division protein MukB; Provisional	95.83
smart00015		26	IQ Short calmodulin-binding motif containing conse	95.78
PF15070		617	GOLGA2L5: Putative golgin subfamily A member 2-lik	95.73
KOG0976		1265	consensus Rho/Rac1-interacting serine/threonine ki	95.7
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	95.68
KOG0980		980	consensus Actin-binding protein SLA2/Huntingtin-in	95.65
KOG0977		546	consensus Nuclear envelope protein lamin, intermed	95.64
PF15397		258	DUF4618: Domain of unknown function (DUF4618)	95.62
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	95.6
PF15066		527	CAGE1: Cancer-associated gene protein 1 family	95.48
KOG1103		561	consensus Predicted coiled-coil protein [Function	95.42
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	95.42
PF15619		194	Lebercilin: Ciliary protein causing Leber congenit	95.37
KOG0977		546	consensus Nuclear envelope protein lamin, intermed	95.35
PHA02562		562	46 endonuclease subunit; Provisional	95.29
KOG0980		980	consensus Actin-binding protein SLA2/Huntingtin-in	95.29
PRK03918		880	chromosome segregation protein; Provisional	95.12
PF04849		306	HAP1_N: HAP1 N-terminal conserved region; InterPro	95.07
KOG4643		1195	consensus Uncharacterized coiled-coil protein [Fun	95.04
PF10473		140	CENP-F_leu_zip: Leucine-rich repeats of kinetochor	95.04
TIGR00606		1311	rad50 rad50. This family is based on the phylogeno	95.02
KOG1003		205	consensus Actin filament-coating protein tropomyos	95.02
PRK09039		343	hypothetical protein; Validated	94.97
KOG0018		1141	consensus Structural maintenance of chromosome pro	94.94
smart00787		312	Spc7 Spc7 kinetochore protein. This domain is foun	94.93
COG3883		265	Uncharacterized protein conserved in bacteria [Fun	94.91
PF09755		310	DUF2046: Uncharacterized conserved protein H4 (DUF	94.89
KOG0995		581	consensus Centromere-associated protein HEC1 [Cell	94.88
KOG2128		1401	consensus Ras GTPase-activating protein family - I	94.81
PF08317		325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	94.75
PTZ00014		821	myosin-A; Provisional	94.72
PF10481		307	CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0	94.68
PF06785		401	UPF0242: Uncharacterised protein family (UPF0242);	94.5
PF07926		132	TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro:	94.5
KOG1853		333	consensus LIS1-interacting protein NUDE [Cytoskele	94.5
KOG0999		772	consensus Microtubule-associated protein Bicaudal-	94.46
TIGR03185		650	DNA_S_dndD DNA sulfur modification protein DndD. T	94.31
PF04091		311	Sec15: Exocyst complex subunit Sec15-like ; InterP	94.31
PF05483		786	SCP-1: Synaptonemal complex protein 1 (SCP-1); Int	94.24
KOG0982		502	consensus Centrosomal protein Nuf [Cell cycle cont	94.17
smart00787		312	Spc7 Spc7 kinetochore protein. This domain is foun	94.05
PF04849		306	HAP1_N: HAP1 N-terminal conserved region; InterPro	94.01
KOG0976		1265	consensus Rho/Rac1-interacting serine/threonine ki	93.95
PF07926		132	TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro:	93.95
KOG4360		596	consensus Uncharacterized coiled coil protein [Fun	93.9
smart00015		26	IQ Short calmodulin-binding motif containing conse	93.87
COG4372		499	Uncharacterized protein conserved in bacteria with	93.79
COG1340		294	Uncharacterized archaeal coiled-coil protein [Func	93.77
KOG2129		552	consensus Uncharacterized conserved protein H4 [Fu	93.7
PF10174		775	Cast: RIM-binding protein of the cytomatrix active	93.62
KOG0249		916	consensus LAR-interacting protein and related prot	93.26
COG3883		265	Uncharacterized protein conserved in bacteria [Fun	93.25
KOG0978		698	consensus E3 ubiquitin ligase involved in syntaxin	93.19
PF13851		201	GAS: Growth-arrest specific micro-tubule binding	93.12
PF09789		319	DUF2353: Uncharacterized coiled-coil protein (DUF2	93.06
PF15619		194	Lebercilin: Ciliary protein causing Leber congenit	92.98
PF05667		594	DUF812: Protein of unknown function (DUF812); Inte	92.85
KOG0612		1317	consensus Rho-associated, coiled-coil containing p	92.77
KOG0964		1200	consensus Structural maintenance of chromosome pro	92.76
PRK04778		569	septation ring formation regulator EzrA; Provision	92.72
PF08614		194	ATG16: Autophagy protein 16 (ATG16); InterPro: IPR	92.3
TIGR01843		423	type_I_hlyD type I secretion membrane fusion prote	92.3
KOG0612		1317	consensus Rho-associated, coiled-coil containing p	92.28
PF04437		494	RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00	92.2
PF07111		739	HCR: Alpha helical coiled-coil rod protein (HCR);	92.19
PF05911		769	DUF869: Plant protein of unknown function (DUF869)	92.15
PRK01156		895	chromosome segregation protein; Provisional	92.11
PF10168		717	Nup88: Nuclear pore component; InterPro: IPR019321	92.1
PF09730		717	BicD: Microtubule-associated protein Bicaudal-D; I	92.01
KOG4674		1822	consensus Uncharacterized conserved coiled-coil pr	91.82
PF09728		309	Taxilin: Myosin-like coiled-coil protein; InterPro	91.81
PF15254		861	CCDC14: Coiled-coil domain-containing protein 14	91.8
TIGR02680		1353	conserved hypothetical protein TIGR02680. Members	91.78
PF04156		191	IncA: IncA protein; InterPro: IPR007285 Chlamydia	91.66
PF08614		194	ATG16: Autophagy protein 16 (ATG16); InterPro: IPR	91.5
KOG1899		861	consensus LAR transmembrane tyrosine phosphatase-i	91.5
COG2433		652	Uncharacterized conserved protein [Function unknow	91.47
PF13870		177	DUF4201: Domain of unknown function (DUF4201)	91.43
KOG0982		502	consensus Centrosomal protein Nuf [Cell cycle cont	91.27
PRK04778		569	septation ring formation regulator EzrA; Provision	91.09
PRK10884		206	SH3 domain-containing protein; Provisional	91.05
PF15070		617	GOLGA2L5: Putative golgin subfamily A member 2-lik	91.04
TIGR02680		1353	conserved hypothetical protein TIGR02680. Members	90.97
PF04012		221	PspA_IM30: PspA/IM30 family; InterPro: IPR007157 T	90.93
KOG0979		1072	consensus Structural maintenance of chromosome pro	90.38
PF10481		307	CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0	90.34
KOG4674		1822	consensus Uncharacterized conserved coiled-coil pr	90.34
KOG0964		1200	consensus Structural maintenance of chromosome pro	90.15
PF04111		314	APG6: Autophagy protein Apg6; InterPro: IPR007243	90.11
COG4026		290	Uncharacterized protein containing TOPRIM domain,	90.06
KOG0979		1072	consensus Structural maintenance of chromosome pro	89.99
TIGR01005		754	eps_transp_fam exopolysaccharide transport protein	89.9
PRK10884		206	SH3 domain-containing protein; Provisional	89.89
TIGR01843		423	type_I_hlyD type I secretion membrane fusion prote	89.75
PF00038		312	Filament: Intermediate filament protein; InterPro:	89.64
PF09789		319	DUF2353: Uncharacterized coiled-coil protein (DUF2	89.59
PF00038		312	Filament: Intermediate filament protein; InterPro:	89.47
KOG1003		205	consensus Actin filament-coating protein tropomyos	89.46
COG4372		499	Uncharacterized protein conserved in bacteria with	89.4
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	89.21
KOG4673		961	consensus Transcription factor TMF, TATA element m	88.97
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	88.93
PF04111		314	APG6: Autophagy protein Apg6; InterPro: IPR007243	88.89
COG1340		294	Uncharacterized archaeal coiled-coil protein [Func	88.89
PF14915		305	CCDC144C: CCDC144C protein coiled-coil region	88.72
TIGR03007		498	pepcterm_ChnLen polysaccharide chain length determ	88.62
COG5185		622	HEC1 Protein involved in chromosome segregation, i	88.59
PF14197		69	Cep57_CLD_2: Centrosome localisation domain of PPC	88.55
PF13514		1111	AAA_27: AAA domain	88.45
KOG2991		330	consensus Splicing regulator [RNA processing and m	88.25
PLN02939		977	transferase, transferring glycosyl groups	87.89
PRK10698		222	phage shock protein PspA; Provisional	87.87
PF05010		207	TACC: Transforming acidic coiled-coil-containing p	87.87
PF09755		310	DUF2046: Uncharacterized conserved protein H4 (DUF	87.73
PF10168		717	Nup88: Nuclear pore component; InterPro: IPR019321	87.53
PRK11281		1113	hypothetical protein; Provisional	87.37
PF10498		359	IFT57: Intra-flagellar transport protein 57 ; Inte	87.34
PRK10929		1109	putative mechanosensitive channel protein; Provisi	87.33
PF10205		102	KLRAQ: Predicted coiled-coil domain-containing pro	87.14
PF08826		61	DMPK_coil: DMPK coiled coil domain like; InterPro:	87.08
KOG0804		493	consensus Cytoplasmic Zn-finger protein BRAP2 (BRC	87.0
PF14197		69	Cep57_CLD_2: Centrosome localisation domain of PPC	86.96
KOG1962		216	consensus B-cell receptor-associated protein and r	86.82
PF09730		717	BicD: Microtubule-associated protein Bicaudal-D; I	86.77
COG2433		652	Uncharacterized conserved protein [Function unknow	86.6
COG0497		557	RecN ATPase involved in DNA repair [DNA replicatio	86.2
PF05667		594	DUF812: Protein of unknown function (DUF812); Inte	85.84
PF10186		302	Atg14: UV radiation resistance protein and autopha	85.72
COG1382		119	GimC Prefoldin, chaperonin cofactor [Posttranslati	85.71
PF10186		302	Atg14: UV radiation resistance protein and autopha	85.57
COG4942		420	Membrane-bound metallopeptidase [Cell division and	85.56
PF01576		859	Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu	85.33
PF01576		859	Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu	85.13
PF09304		107	Cortex-I_coil: Cortexillin I, coiled coil; InterPr	84.92
KOG0804		493	consensus Cytoplasmic Zn-finger protein BRAP2 (BRC	84.83
KOG4360		596	consensus Uncharacterized coiled coil protein [Fun	84.66
PF09728		309	Taxilin: Myosin-like coiled-coil protein; InterPro	84.58
PF10174		775	Cast: RIM-binding protein of the cytomatrix active	84.52
PF10146		230	zf-C4H2: Zinc finger-containing protein ; InterPro	84.4
KOG0249		916	consensus LAR-interacting protein and related prot	83.16
PF10212		518	TTKRSYEDQ: Predicted coiled-coil domain-containing	83.12
KOG1962		216	consensus B-cell receptor-associated protein and r	83.1
KOG4593		716	consensus Mitotic checkpoint protein MAD1 [Cell cy	82.67
KOG0243		1041	consensus Kinesin-like protein [Cytoskeleton]	82.65
COG3074		79	Uncharacterized protein conserved in bacteria [Fun	82.45
TIGR00634		563	recN DNA repair protein RecN. All proteins in this	82.28
PF12777		344	MT: Microtubule-binding stalk of dynein motor; Int	82.25
PF13514		1111	AAA_27: AAA domain	82.19
PF11559		151	ADIP: Afadin- and alpha -actinin-Binding; InterPro	81.81
PRK12704		520	phosphodiesterase; Provisional	81.78
PRK10361		475	DNA recombination protein RmuC; Provisional	81.51
KOG0999		772	consensus Microtubule-associated protein Bicaudal-	81.45
KOG4809		654	consensus Rab6 GTPase-interacting protein involved	81.3
PF13870		177	DUF4201: Domain of unknown function (DUF4201)	81.18
KOG0978		698	consensus E3 ubiquitin ligase involved in syntaxin	81.16
PRK11281		1113	hypothetical protein; Provisional	80.92
KOG3684		489	consensus Ca2+-activated K+ channel proteins (inte	80.9
PF07889		126	DUF1664: Protein of unknown function (DUF1664); In	80.88
PF10146		230	zf-C4H2: Zinc finger-containing protein ; InterPro	80.62
TIGR03007		498	pepcterm_ChnLen polysaccharide chain length determ	80.54
PRK00106		535	hypothetical protein; Provisional	80.04

>COG5022 Myosin heavy chain [Cytoskeleton]	Back alignment and domain information

Probab=100.00  E-value=1.2e-138  Score=1268.69  Aligned_cols=1009  Identities=30%  Similarity=0.433  Sum_probs=746.9

Q ss_pred             CCCHHHHHHHHhhceEeeCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccccccccCCccc
Q 001113            1 MCDAKALEDSLCKREIVTRDETITKWLDPEAAAVSRDALAKIVYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESF   80 (1154)
Q Consensus         1 ~~~~~~l~~~l~~r~~~~~~e~~~~~l~~~~a~~~rdalak~lY~~LF~wiV~~iN~~l~~~~~~~~~IgvLDi~GFE~f   80 (1154)
                      |||++.|.+||++|+|.++||.|.+|+|..||..+||||||+||++||+|||++||.+|+.++...+|||||||||||+|
T Consensus       362 gId~~~f~k~lvk~~ikt~~E~i~~~~n~~QA~~irdslAK~lY~~lFdwiV~rIN~sL~~~~~~~~fIGVLDIyGFEiF  441 (1463)
T COG5022         362 GIDPSLFVKWLVKRQIKTGGEWIVVPLNLEQALAIRDSLAKALYSNLFDWIVDRINKSLDHSAAASNFIGVLDIYGFEIF  441 (1463)
T ss_pred             CCCHHHHHHHHHHhHhhcCceEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccceeEEeecchhhh
Confidence            79999999999999999999999999999999999999999999999999999999999887777899999999999999


Q ss_pred             CCCchhHHHhhhhhHHHHhHHHHhhhhhhHhHhhhcCCccccccccCcHHHHHHhhc-CccchhhcchhhhcCCCCChHH
Q 001113           81 KTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYSKEAINWSYIEFVDNQDILDLIEK-KPGGIIALLDEACMFPRSTHET  159 (1154)
Q Consensus        81 ~~NsfeqlciNyanEkLq~~f~~~vf~~eqeey~~E~i~~~~i~~~dn~~~ldlie~-~~~Gil~lLdee~~~p~~td~~  159 (1154)
                      +.|||||||||||||||||+||+|||++|||||.+|||+|++|+|.|||+||||||+ .|.|||++|||||++|.|||++
T Consensus       442 EkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s  521 (1463)
T COG5022         442 EKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDES  521 (1463)
T ss_pred             ccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCcchhHHHhccCCCchHhhhcHHhcCCCCCchH
Confidence            999999999999999999999999999999999999999999999999999999998 2459999999999999999999


Q ss_pred             HHHHHHHHhc--CCCCcCCCCCCCCceEEEeeCcceEEeccchhhhcchhhhHHHHHHHhhcCCcccccccccchhhccC
Q 001113          160 FAQKLYQTFK--NHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCSFVSSLFLPLAEESSK  237 (1154)
Q Consensus       160 ~~~kl~~~~~--~~~~~~~p~~~~~~F~I~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~v~~lf~~~~~~~~~  237 (1154)
                      |.+||++.+.  +++.|.+||++...|+|+||||+|+|+++||++||+|++++++++|+.+|+|+|++.||+.... ..+
T Consensus       522 ~~sKL~~~l~~~~~~~f~~~rf~~~~FvvkHYAgDVeY~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~-~~~  600 (1463)
T COG5022         522 FTSKLAQRLNKNSNPKFKKSRFRDNKFVVKHYAGDVEYDVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEEN-IES  600 (1463)
T ss_pred             HHHHHHHHhccccCccccccccCCCceEEEeecccceeeccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhhh-ccc
Confidence            9999999986  5688999999999999999999999999999999999999999999999999999999995433 334


Q ss_pred             CCCCcchHHHHHHHHHHHHHHhccCCCeeeeecCCCCCCCCCcccccchhhhhhccchhhhHHHHhcCCCCccChHHHHH
Q 001113          238 TSKFSSIGSRFKQQLQQLLETLSSSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKPFDEFVD  317 (1154)
Q Consensus       238 ~~k~~tv~~~f~~sl~~L~~~l~~t~~hfirCikPN~~~~~~~fd~~~v~~QLr~~gvle~iri~~~gyp~r~~~~~F~~  317 (1154)
                      .++++|+|++|+.||..||++|++|+||||||||||..|+|+.||+.+|++|||||||+|+|||+|+|||+||+|+||+.
T Consensus       601 K~~~pT~gs~~K~sl~~Lm~tl~sTqphyIRCIkPN~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~  680 (1463)
T COG5022         601 KGRFPTLGSRFKESLNSLMSTLNSTQPHYIRCIKPNEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQ  680 (1463)
T ss_pred             cCCCCcHHHHHHHHHHHHHHHHHhcCCceeEeeCCCcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHH
Confidence            46889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhcccCC-----CchhHHHHHHHHhhcCCC--CcccccceeeeeccccchhhhhhhhccchhHHHHHHHhhhccc
Q 001113          318 RFGILASKVLDG-----SSDEVTACKRLLEKVGLE--GYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLS  390 (1154)
Q Consensus       318 ry~~l~~~~~~~-----~~~~~~~~~~il~~~~~~--~~qiG~TkVFlr~~~~~~Le~~r~~~l~~~a~~IQ~~~R~~~~  390 (1154)
                      ||++|.|.....     ..|.+.+|..||..+.++  .||+|+||||||+|+++.||.+|...++.+++.||+.|||++.
T Consensus       681 RY~IL~p~~~~~~~~~~~~~~~~~~~~IL~~~~id~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~  760 (1463)
T COG5022         681 RYRILSPSKSWTGEYTWKEDTKNAVKSILEELVIDSSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYL  760 (1463)
T ss_pred             HHHHhcccccccccccchhHHHHHHHHHHHhhcCChhheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999974321     246899999999998776  6999999999999999999999999999999999999999999


Q ss_pred             chhhhchhhhHHHHHHHHHhhhhhhhhhhccchhhhhhHHHHHHHHHHHHHHHHhhhhHHhHH-HHHHHHHHHHHHHHHH
Q 001113          391 RKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCFSAVCIQ-TGMRGMAARNELRFRR  469 (1154)
Q Consensus       391 Rk~y~~~r~a~i~IQ~~~Rg~lar~~~~~~r~~~AAi~IQ~~~R~~~~Rk~y~~~r~a~i~iQ-s~~Rg~~aR~~~~~~~  469 (1154)
                      |++|.+....+..+|...+|+..|++...--...+++.+|..||....|+.|...-..++.+| ..++....+.......
T Consensus       761 rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~  840 (1463)
T COG5022         761 RRRYLQALKRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEF  840 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHhcccchhhhcccchHHHhHHHhhHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            999999999999999999999999887766667899999999999999999999999999999 7777777776666777


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001113          470 QTRASILIQSHCRKYLARLHYMKLKKAAITTQCAWRGKVARRELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKR  549 (1154)
Q Consensus       470 ~~~aa~~IQ~~~R~~~~r~~~~~~~~a~i~iQ~~~R~~~arr~l~~lk~~a~~~~~L~~~~~~LE~kv~el~~~l~~e~~  549 (1154)
                      ..++++.+|++||.+..+.+|..+.+.++.+|+.+|...|++.+..++.+.+++..+.....+|+.++.++...+.-...
T Consensus       841 ~~~~~~L~~~~~rs~~~~kr~~~L~k~~i~~~~~~r~~~a~r~~~e~k~~~~~~~~l~~~~~~l~~~~~el~~~~~s~~~  920 (1463)
T COG5022         841 SLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLI  920 (1463)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHhhccchhhh
Confidence            77899999999999999999999999999999999999999999999999999999999999999999999876653111


Q ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchh---hHHHHHHHHHHHHHHHHHHH
Q 001113          550 MRVDMEEAKTQENAKLQSALQEMQLQFKESKEKLMKEIEVAKKEAEKVPVVQEVPVI---DHAVVEELTSENEKLKTLVS  626 (1154)
Q Consensus       550 ~~~~le~~~~~e~~~L~~~l~~le~~l~~~~~~~~~e~~~~~~~~ee~~~~~e~~~~---e~~~~~~L~~e~~kLe~~l~  626 (1154)
                      .+..+.   .+.       +..++.-+....                   +++.+..   ....+.+|.....+|++...
T Consensus       921 ~~~~~k---~e~-------~a~lk~~l~~~d-------------------~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~  971 (1463)
T COG5022         921 ENLEFK---TEL-------IARLKKLLNNID-------------------LEEGPSIEYVKLPELNKLHEVESKLKETSE  971 (1463)
T ss_pred             hhhHHH---HHH-------HHHHHHHhhccc-------------------ccchhHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence            111000   011       111111111100                   0000000   11133444444444444444


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH---HHHHHHhhcccCcccccccccCC
Q 001113          627 SLEKKIDETEKKFEETSKISEERLKQALEAESKIVQLKTAMHRLEEKVSDMETE---NQILRQQSLLSTPIKKMSEHISA  703 (1154)
Q Consensus       627 ~l~~~l~ele~~~~e~~~~~~~~~~~l~~~e~~~~~l~~~~~~Le~~i~~Le~e---~~~l~qq~~~~~~~~~~~~~~~~  703 (1154)
                      +....+...+....+.....+++    ....+.+..+..+...+.+....+++.   +..+....-..+   ......+.
T Consensus       972 ~~~~~~k~~~~~~~~~~~~~~el----~~~~~~l~~~~~~~~~l~~~~~~lk~~~~~~~~l~~~~~~~~---s~~~~~~~ 1044 (1463)
T COG5022         972 EYEDLLKKSTILVREGNKANSEL----KNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIIS---SESTELSI 1044 (1463)
T ss_pred             HHHHHHHHhhHHHHhcccHHHHH----HHHHHHHHHHHhhhhhhhhhhhhcccccchhhhhhhhhhhhc---cchhhhhc
Confidence            33332222222222222211111    111111111111112222222222222   222221100000   00000000


Q ss_pred             --cccccCCC-CCccccccCCCCCCCCCCcccCCCcchHHHHhhhHHhhhhcHHHHHHHhh-hcCCCC-CCCCchHHH-H
Q 001113          704 --PATQSLEN-GHHVIEENISNEPQSATPVKKLGTESDSKLRRSHIEHQHENVDALINCVA-KNLGYC-NGKPVAAFT-I  777 (1154)
Q Consensus       704 --~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~e~~~~li~~l~-~~~~~~-~~~p~~A~i-l  777 (1154)
                        ++. ...+ ..+...... +..   ....... +..  ..-....+..+....+++.+. .++.+. ...+.||.. .
T Consensus      1045 ~~~~~-~~~~~~~~~~~~l~-~~~---~~l~~~r-~~~--~~~~~q~~~~e~t~~~~~~i~~~~~~~~~~~~~~~~~~~~ 1116 (1463)
T COG5022        1045 LKPLQ-KLKGLLLLENNQLQ-ARY---KALKLRR-ENS--LLDDKQLYQLESTENLLKTINVKDLEVTNRNLVKPANVLQ 1116 (1463)
T ss_pred             cCccc-chhhhhhHHHHHhh-hhH---hhhhhcC-ccc--chhHHHHHHHHhhhhhhhhhccchhhhhcccccchhhHHH
Confidence              000 0000 000000000 000   0000000 000  000011233455555555554 333222 122234544 4


Q ss_pred             HHHHhhhcc-hhhhhHHHHHHHHHHHHHhhcc---cCCccchhhHHHhHHHHHHHHHHHhhhcCCCCCCCCCCCCCccch
Q 001113          778 YKCLLHWKS-FEAERTSVFDRLIQMIGSAIEN---EDDNDHMAYWLSNTSTLLFLLQRSLKAAGASGATPHKKPPTATSL  853 (1154)
Q Consensus       778 ~~c~~~~~~-~~~e~~~ll~~ii~~i~~~i~~---~~d~~~l~fWLSN~~~Ll~~lq~~~~~~~~~~~~~~~~~~~~~~~  853 (1154)
                      +...-+|+. +..+...++...+..++.+...   .+-...+.||.+|...+++.---.       ...+.+      ..
T Consensus      1117 ~~~~~~~k~~l~~~~~~~~~~~~~~le~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-------~~~~~~------~~ 1183 (1463)
T COG5022        1117 FIVAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPFA-------ALSEKR------LY 1183 (1463)
T ss_pred             HHHHHhhccchHHhhhhHHHHHHhhccchhccccchhccccccccccccccCCCCCchh-------hcchhh------hh
Confidence            444457776 5556666777666666666442   234456789999999876310000       000000      00


Q ss_pred             hhhhhcccCCCCCchhhhhHHhhHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----h---cCCC
Q 001113          854 FGRMAMGFRSSPSSANLAAAAALAVVRQVEAKYPALLFKQQLAAYVEKIYGIIRDNLKKELSSLLSLC----I---QAPR  926 (1154)
Q Consensus       854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~f~q~L~~~~~~iy~~l~~~~~~~l~~~L~~~----i---~~p~  926 (1154)
                      ...+-+ +.+.    .    + ...   |.      ..+..+..+..++|+.|....  .+.+.+...    .   ..++
T Consensus      1184 ~~~~~d-~~~~----~----s-~s~---v~------~l~~~l~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~~ 1242 (1463)
T COG5022        1184 QSALYD-EKSK----L----S-SSE---VN------DLKNELIALFSKIFSGWPRGD--KLKKLISEGWVPTEYSTSLKG 1242 (1463)
T ss_pred             Hhhhhc-cccc----c----c-HHH---HH------HHHHHHHHHHHhccccchhhh--hhhhhhhhccchhhhcccccc
Confidence            000000 0000    0    0 111   11      334567777888888887654  233333211    1   1111


Q ss_pred             CCCCCcccCCCcCCCCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhhHHHhHhhhccCCCCCCchhHHH
Q 001113          927 TSKGSVLRSGRSFGKDSASSHWQSIIDSLNTLLSTLKQNFVPPVLVQKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYV 1006 (1154)
Q Consensus       927 ~~~~~~~~~~~~~~~~~~~~~~~~il~~L~~~~~~l~~~~v~~~l~~Q~f~Qlf~~ina~lfN~Ll~r~~~cs~s~G~qI 1006 (1154)
                      +..      +...+..+...+.++++.+++.+.++++.+.+.+.+..-.++++..++|+.+||.|.++..-..|+.|-++
T Consensus      1243 ~~~------~~~~~~~~~~~~~~~ll~~~n~i~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~n~L~~~~~~~~~k~~~~~ 1316 (1463)
T COG5022        1243 FNN------LNKKFDTPASMSNEKLLSLLNSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLRWKSATEV 1316 (1463)
T ss_pred             ccc------hhhcccCcccCcHHHHHHHHHHHHHHHHHhhcchhhhhHHHHhHhhhcchhhhhhhhcccCccchhhcccc
Confidence            110      11122244567889999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhchHHHHHHHhhcccccccchHHHhHHHHHHHhHHhhcccccCCHHHHHhccCcCCCHHHHHHHHhccccCCCCCCCCC
Q 001113         1007 KAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVS 1086 (1154)
Q Consensus      1007 r~nls~Le~W~~~~~~~~~~~~~~~L~~l~Qa~~lLq~~kk~~~~~~~i~~~~c~~Ls~~Ql~kil~~Y~~d~~e~~~v~ 1086 (1154)
                      .+|.+.+.+||+.++   ...+..+|++++||++.+++.+++..+++++ .+.|.+|+|.|+.+|+.+|.+.++| .++|
T Consensus      1317 ~~n~~~~~~w~~~~~---i~~~~~~l~~l~q~~k~~~~~~~dl~~~~~~-~~~~~~l~~~~~~~L~~~y~~~~~e-~~l~ 1391 (1463)
T COG5022        1317 NYNSEELDDWCREFE---ISDVDEELEELIQAVKVLQLLKDDLNKLDEL-LDACYSLNPAEIQNLKSRYDPADKE-NNLP 1391 (1463)
T ss_pred             cccchhhhHHHHhhc---ccchHHHHHHHHhhhhhhhhhhCCHHHHHHH-HHHHHhcCHHHHHHHHHhhhhhccc-CCCh
Confidence            999999999999988   3556689999999999999998777777677 6999999999999999999999998 5999


Q ss_pred             HHHHHHHHHhhhh
Q 001113         1087 PNVISSMRILMTE 1099 (1154)
Q Consensus      1087 ~~~i~~v~~~~~~ 1099 (1154)
                      .++.++|.+....
T Consensus      1392 ke~~~~~~a~~~~ 1404 (1463)
T COG5022        1392 KEILKKIEALLIK 1404 (1463)
T ss_pred             HHHHHHHhhhhhH
Confidence            9999777665543

>PTZ00014 myosin-A; Provisional	Back alignment and domain information

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]	Back alignment and domain information

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]	Back alignment and domain information

>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport	Back alignment and domain information

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]	Back alignment and domain information

>cd01380 MYSc_type_V Myosin motor domain, type V myosins	Back alignment and domain information

>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins	Back alignment and domain information

>cd01377 MYSc_type_II Myosin motor domain, type II myosins	Back alignment and domain information

>cd01378 MYSc_type_I Myosin motor domain, type I myosins	Back alignment and domain information

>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins	Back alignment and domain information

>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata	Back alignment and domain information

>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins	Back alignment and domain information

>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins	Back alignment and domain information

>cd01379 MYSc_type_III Myosin motor domain, type III myosins	Back alignment and domain information

>smart00242 MYSc Myosin	Back alignment and domain information

>cd00124 MYSc Myosin motor domain	Back alignment and domain information

>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]	Back alignment and domain information

>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins	Back alignment and domain information

>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]	Back alignment and domain information

>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril	Back alignment and domain information

>KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility]	Back alignment and domain information

>KOG1892 consensus Actin filament-binding protein Afadin [Cytoskeleton]	Back alignment and domain information

>PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains	Back alignment and domain information

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]	Back alignment and domain information

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]	Back alignment and domain information

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]	Back alignment and domain information

>COG5022 Myosin heavy chain [Cytoskeleton]	Back alignment and domain information

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]	Back alignment and domain information

>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>PRK11637 AmiB activator; Provisional	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility]	Back alignment and domain information

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K	Back alignment and domain information

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes	Back alignment and domain information

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]	Back alignment and domain information

>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>PRK11637 AmiB activator; Provisional	Back alignment and domain information

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton]	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)	Back alignment and domain information

>PRK02224 chromosome segregation protein; Provisional	Back alignment and domain information

>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	Back alignment and domain information

>PF14662 CCDC155: Coiled-coil region of CCDC155	Back alignment and domain information

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)	Back alignment and domain information

>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PRK02224 chromosome segregation protein; Provisional	Back alignment and domain information

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []	Back alignment and domain information

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>PRK09039 hypothetical protein; Validated	Back alignment and domain information

>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]	Back alignment and domain information

>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]	Back alignment and domain information

>PHA02562 46 endonuclease subunit; Provisional	Back alignment and domain information

>PF14662 CCDC155: Coiled-coil region of CCDC155	Back alignment and domain information

>PRK03918 chromosome segregation protein; Provisional	Back alignment and domain information

>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription]	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues	Back alignment and domain information

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5	Back alignment and domain information

>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton]	Back alignment and domain information

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]	Back alignment and domain information

>PF15397 DUF4618: Domain of unknown function (DUF4618)	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>PF15066 CAGE1: Cancer-associated gene protein 1 family	Back alignment and domain information

>KOG1103 consensus Predicted coiled-coil protein [Function unknown]	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease	Back alignment and domain information

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]	Back alignment and domain information

>PHA02562 46 endonuclease subunit; Provisional	Back alignment and domain information

>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton]	Back alignment and domain information

>PRK03918 chromosome segregation protein; Provisional	Back alignment and domain information

>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues	Back alignment and domain information

>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]	Back alignment and domain information

>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ]	Back alignment and domain information

>TIGR00606 rad50 rad50	Back alignment and domain information

>KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton]	Back alignment and domain information

>PRK09039 hypothetical protein; Validated	Back alignment and domain information

>KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>smart00787 Spc7 Spc7 kinetochore protein	Back alignment and domain information

>COG3883 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain	Back alignment and domain information

>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]	Back alignment and domain information

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []	Back alignment and domain information

>PTZ00014 myosin-A; Provisional	Back alignment and domain information

>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore []	Back alignment and domain information

>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function	Back alignment and domain information

>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT)	Back alignment and domain information

>KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton]	Back alignment and domain information

>KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD	Back alignment and domain information

>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane	Back alignment and domain information

>PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex	Back alignment and domain information

>KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>smart00787 Spc7 Spc7 kinetochore protein	Back alignment and domain information

>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues	Back alignment and domain information

>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]	Back alignment and domain information

>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT)	Back alignment and domain information

>KOG4360 consensus Uncharacterized coiled coil protein [Function unknown]	Back alignment and domain information

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues	Back alignment and domain information

>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	Back alignment and domain information

>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown]	Back alignment and domain information

>KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown]	Back alignment and domain information

>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []	Back alignment and domain information

>KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only]	Back alignment and domain information

>COG3883 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF13851 GAS: Growth-arrest specific micro-tubule binding	Back alignment and domain information

>PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function	Back alignment and domain information

>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease	Back alignment and domain information

>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function	Back alignment and domain information

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells	Back alignment and domain information

>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family	Back alignment and domain information

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases	Back alignment and domain information

>PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins	Back alignment and domain information

>PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants	Back alignment and domain information

>PRK01156 chromosome segregation protein; Provisional	Back alignment and domain information

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs	Back alignment and domain information

>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) []	Back alignment and domain information

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]	Back alignment and domain information

>PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed	Back alignment and domain information

>PF15254 CCDC14: Coiled-coil domain-containing protein 14	Back alignment and domain information

>TIGR02680 conserved hypothetical protein TIGR02680	Back alignment and domain information

>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion	Back alignment and domain information

>PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells	Back alignment and domain information

>KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only]	Back alignment and domain information

>COG2433 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF13870 DUF4201: Domain of unknown function (DUF4201)	Back alignment and domain information

>KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>PRK10884 SH3 domain-containing protein; Provisional	Back alignment and domain information

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5	Back alignment and domain information

>TIGR02680 conserved hypothetical protein TIGR02680	Back alignment and domain information

>PF04012 PspA_IM30: PspA/IM30 family; InterPro: IPR007157 This family includes PspA a protein that suppresses sigma54-dependent transcription	Back alignment and domain information

>KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]	Back alignment and domain information

>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore []	Back alignment and domain information

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]	Back alignment and domain information

>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells	Back alignment and domain information

>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]	Back alignment and domain information

>KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]	Back alignment and domain information

>TIGR01005 eps_transp_fam exopolysaccharide transport protein family	Back alignment and domain information

>PRK10884 SH3 domain-containing protein; Provisional	Back alignment and domain information

>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family	Back alignment and domain information

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope	Back alignment and domain information

>PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function	Back alignment and domain information

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope	Back alignment and domain information

>KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton]	Back alignment and domain information

>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription]	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells	Back alignment and domain information

>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown]	Back alignment and domain information

>PF14915 CCDC144C: CCDC144C protein coiled-coil region	Back alignment and domain information

>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily	Back alignment and domain information

>COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning]	Back alignment and domain information

>PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89	Back alignment and domain information

>PF13514 AAA_27: AAA domain	Back alignment and domain information

>KOG2991 consensus Splicing regulator [RNA processing and modification]	Back alignment and domain information

>PLN02939 transferase, transferring glycosyl groups	Back alignment and domain information

>PRK10698 phage shock protein PspA; Provisional	Back alignment and domain information

>PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules	Back alignment and domain information

>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain	Back alignment and domain information

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs	Back alignment and domain information

>PRK11281 hypothetical protein; Provisional	Back alignment and domain information

>PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms	Back alignment and domain information

>PRK10929 putative mechanosensitive channel protein; Provisional	Back alignment and domain information

>PF10205 KLRAQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019343 This entry represents a N-terminal 100 residues long domain, which contains a conserved KLRAQ motif	Back alignment and domain information

>PF08826 DMPK_coil: DMPK coiled coil domain like; InterPro: IPR014930 This domain is found in the myotonic dystrophy protein kinase (DMPK) and adopts a coiled coil structure	Back alignment and domain information

>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]	Back alignment and domain information

>PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89	Back alignment and domain information

>KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms]	Back alignment and domain information

>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) []	Back alignment and domain information

>COG2433 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function	Back alignment and domain information

>PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking	Back alignment and domain information

>COG1382 GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking	Back alignment and domain information

>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	Back alignment and domain information

>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril	Back alignment and domain information

>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril	Back alignment and domain information

>PF09304 Cortex-I_coil: Cortexillin I, coiled coil; InterPro: IPR015383 This domain is predominantly found in the actin-bundling protein cortexillin I from Dictyostelium discoideum (Slime mold)	Back alignment and domain information

>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]	Back alignment and domain information

>KOG4360 consensus Uncharacterized coiled coil protein [Function unknown]	Back alignment and domain information

>PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed	Back alignment and domain information

>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []	Back alignment and domain information

>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule	Back alignment and domain information

>KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only]	Back alignment and domain information

>PF10212 TTKRSYEDQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019348 This entry represents a C-terminal 500 residue region, which contains a conserved TTKRSYEDQ motif	Back alignment and domain information

>KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms]	Back alignment and domain information

>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0243 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>COG3074 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>TIGR00634 recN DNA repair protein RecN	Back alignment and domain information

>PF12777 MT: Microtubule-binding stalk of dynein motor; InterPro: IPR024743 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases	Back alignment and domain information

>PF13514 AAA_27: AAA domain	Back alignment and domain information

>PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch	Back alignment and domain information

>PRK12704 phosphodiesterase; Provisional	Back alignment and domain information

>PRK10361 DNA recombination protein RmuC; Provisional	Back alignment and domain information

>KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF13870 DUF4201: Domain of unknown function (DUF4201)	Back alignment and domain information

>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PRK11281 hypothetical protein; Provisional	Back alignment and domain information

>KOG3684 consensus Ca2+-activated K+ channel proteins (intermediate/small conductance classes) [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF07889 DUF1664: Protein of unknown function (DUF1664); InterPro: IPR012458 The members of this family are hypothetical plant proteins of unknown function	Back alignment and domain information

>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule	Back alignment and domain information

>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily	Back alignment and domain information

>PRK00106 hypothetical protein; Provisional	Back alignment and domain information

Homologous Structure Templates