Citrus Sinensis ID: 001155

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------
MTGQIQNFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQSSSDGSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLRGQNEIKASVVANAHFKFSDGFGNHTTEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHYHSSCTPKPSISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAISNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQAEERQKSHFSASTTRTYQYETPQPAVLKIDPIRFDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVEREPFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSYECVDDLDFDEYEYVYEMNGSTTKPDQNNGGRVLPRWSMFSENR
ccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccHHHHHHHcHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHccccEEEEccccccccHHcHcccccccccEEEEccHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHcccHHHHHHHcccccEEEEcccccHHHHHHHHHHHcccccccccccccccccEEEEEEccccccccEEEEEcHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccEEEEEcccccccccccccEEEEcccccccHHHHHccccccccccccEEEEcccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccEEEHHHcccccHHHHHccccccccccccccccHHHHHHHHHHHHHcccHHHHHHcccccccccEEEEEcHHHcHHHHcccCEEEEEcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccEEEccccccccccccccccccHHHHHcccccccccccccccccccccccccccc
*************AEVEKAWHTLSSLQI**RNYIRPGLSTPVE***********************************************************************EIKASVVANAHFKFSDGFGNHTTEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHYHS***************************ETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAISNELL****************************************************ETPQPAVLKIDPIRFDTQVHLYNES*****************RLGVSSYPVEREPFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVA*******GHNRF**ANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPS*****************************************NLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEF*****************************************************************SYECVDDLDFDEYEYVYEM*******************SMF****
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MTGQIQNFPRLHSAEVEKAWHTLSSLQISRRNYIRPGLSTPVEHSDNDASHNVSRRASLQSSSDGSKFSEPMNNRQKGSQINFNVNEPARCTGSFHLSNNVRDAGAGKGLRGQNEIKASVVANAHFKFSDGFGNHTTEAGQIDESAEVLANKIDDDEILETIDVDQIVMEHYHSSCTPKPSISRLPSITPNAGNDKFARQDETCLPPELCSICNHGCKLGLCPETSSHIQDMKDMLIAISNELLDNATNLSPAQTEKLRQERLQLSKQIQLLEGYRQAEERQKSHFSASTTRTYQYETPQPAVLKIDPIRFDTQVHLYNESEGYGNWNSSSVSFSSVDRLGVSSYPVEREPFIPKIIKVNYIEGSNDQKWSSWDFPWTKKLEANNKKVFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPATFLSGNMEWTEQQEILRELNSDYCKYKLLYVTPEKVAKSDVLLRQLESLNARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWMDCEKVAERLQVGLSYGHFFLLKEFYVVSLECGHKAAFYHGSIDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQFSSSHILEVFRGSLNQYVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSDVYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLLSGKLSPSRNDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTEEELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDENEAPNANKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSYECVDDLDFDEYEYVYEMNGSTTKPDQNNGGRVLPRWSMFSENR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
ATP-dependent DNA helicase Q-like 4A 3'-5' DNA helicase that may play a role in the repair of DNA. Required for maintenance of genome stability by modulation of the DNA damage response and repression of crossovers. Confers resistance to genotoxic stress.probableQ8L840

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.6.-.-Acting on acid anhydrides.probable
3.6.4.-Acting on acid anhydrides; involved in cellular and subcellular movement.probable
3.6.4.12DNA helicase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2V1X, chain A
Confidence level:very confident
Coverage over the Query: 367-718,742-906
View the alignment between query and template
View the model in PyMOL
Template: 1WUD, chain A
Confidence level:very confident
Coverage over the Query: 963-1026
View the alignment between query and template
View the model in PyMOL
Template: 4F92, chain B
Confidence level:confident
Coverage over the Query: 298-376,390-762
View the alignment between query and template
View the model in PyMOL