Citrus Sinensis ID: 001162

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130----

MELEVRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRKNNVKKHEDSYMQAFNESTSIAKALLRVQDSDEGLSHKCNVKGVELGVALTSVAFINPETAENVSLCSLELVAILPRLSSKENNPENNAPRIKSNLTSKEISGGASTDKKECRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCTVNLKKEIPMVSLSPCHFKMLEKDKAFGIGLELDNKNHKTKKMLEKTSSGIYMDDGDLSAEDDIIAALSSEPSSKEDEEAVYQFENKKGLECLLHTWLLAQLTAVASNIGSEFNTLVLSNETLLHFEVKGYKSGTYGKVPASCNGALENKTKARELRTEIFCVLTFSEESLHGGKNNAYELTLEARGQQNNNTEAVRQLFGKLNSGDSVSFYTVKERGSTQGFDSNVSSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSRDAKGKRATLA

cEEEEEEEcccccccccccHHHHHHHHccccccccccEEEEEEEEccccEEEEEEccccccccccEEcHHHHHHcccccccEEEEEEEccccccEEEEECcccccHHHHHHHcHHHHHHHHHHccEEEccccEEEEEEccccEEEEEEEECcccccEEEEccccEEEEccccccccccccccccHHcccccHHHHHHHHccccccccccccccccccccccccccEEEccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccEEccHHHHHHHHcccccEEEEEccccccccccccccccccccccHHccccccccccccccccHHHHHcccccccccccccccccHHHHHHHcccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccEEEEEcccEEEEEEEcccccccccccccccccccccccccccccEEEEEEEcccccccccccccccccHHHHcccccccccHHHHHHccccccccccCEEcccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHcccccccEEEEEcccccHHHHHHHHHHHHHccccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHcccCEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccEEEEEEccccccccccccccccccEEEEcccccHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHcccccccEEEEEccccccHHHHHHHHHHHccccEEEccccccccccccHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccccHHHHHHHHHHHHHcccccccEEEEEEcccccccccccccccccccEEECccccHHHHHHHHHHHcccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccccc

**LEVRVVGGVENCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVA*************************AKALLRVQ***EGLSHKCNVKGVELGVALTSVAFINPETAENVSLCSLELVAILP***********************************CRQAVVHLLFSDSVAKGHVKIARALRLYLNAGLHSWVYLKKCTVNLKKEIPMVSLSPCHFKMLEKDKAFGIGLEL*******************MDDGDLSAEDDIIAALSSE*S********YQFENKKGLECLLHTWLLAQLTAVASNIGSEFNTLVLSNETLLHFEVKGYKSGTYGKVPASCNGALENKTKARELRTEIFCVLTFSEESLHGGKNNAYELTL**************QLFGKLNSGDSVSFY**K*******FDSNVSSLSWMGTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLDSI***************VIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKR**DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNI********PVITDALLKSIAS**********KLRLYSIYGQFL*********************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Peroxisome biogenesis protein 1	Involved in PTS1- and PTS2-dependent protein import into peroxisomes. May form heteromeric AAA ATPase complexes required for the import of proteins.	probable	Q9FNP1

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2X8A, chain A
Confidence level:very confident
Coverage over the Query: 846-1067,1079-1097
View the alignment between query and template
View the model in PyMOL

Template: 3HU3, chain A
Confidence level:very confident
Coverage over the Query: 552-833
View the alignment between query and template
View the model in PyMOL

Template: 1WLF, chain A
Confidence level:very confident
Coverage over the Query: 1-170
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID	Alignment Graph	Confidence Level	View Alignment and Template
Query
3cf2, chain A		very confident	Alignment \| Template Structure