Citrus Sinensis ID: 001298

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100-----
MLAILIGLLTVLTWHFTRVYTTKSLDTLAYGLRYELLQRPLLRMWNIVNSTAEITAAQVKLSEYVIKRYNKPATQAEQIQLYEVMRDVTWAMFASRKALNAITINYKNGFVQAFHRDHRSNNTFYIYSDLSNYSIGTSGPYDSNLISSREGWNDQSIKGNISAIWYREPLDPITGEKIGKASPIPPDDLINIAGISQVPDGVASWHVAVSKFTNSPLLSAALPVWDPTTSNKSIVAVVGVTTALSSVGQLMKELVEVHSGHIYLTSQEGYLLATSTNAPLLTNSSTGPNLVKAVDSDNPVIQMGAQWLQSEYGSKVPPGHVIHVQNAKLGHKQYYMDTFFLNLKRLPIVGVIIIPREYIMGKADERAYKTLIILISASVCILVIGCICILILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIYDADFPNTVVVLATVGSMERMIISQWLRKKKVSTLETSEWHGLTQILRELLDPISPVSSNGFDAPYSSREPLKAEMTNIKALIDPVYVVVIDIALLDLSSDLWREQLNSLDIFHRKAMFAWVVNHQTTSPIKTELSREGQNIVVTKPLYKGKMIQLLETAVRGKILGMQNRISSTTNEGNGEEIRGSIANYSASKHQKFRKCSFEFSSICPGESSSRREDLIHTMFRERHQIGSSRRDQPCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTILRLTKNMPSEATGTTR
ccHHEEHHHHEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccEEEEEECcccccEEEEEEccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccHcccccccccccEEEEEcccccccEEEcccccccccccccEEEEEEcccccHHHHHHHHHHHHcccEEEEEEEccCEEEECcccccccccccccccEEEEccccccHHHHHHHHHHHccccccccccEEEEEEccccccCEEEEccccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccHHHHHHHHHHHHHHHHHccccEEEEEEcccccccEEcccHHHHHHHHHHHHcccccccccEEEEEEEECccccccccccccccccccccHHHHHHHHHHcccccccccccEEEEEEEECcccccccccHHHccccccccccccccccccccccHHHHHHHHHHcccEEEEEEcccccEEEEEEEEEcccccccccccccccccEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHcccccEEEHHHHcccccHHHHHHHHHccccccccEEEEEEEcccccHHHHHHHccccccEEECcccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEcccccccHHHHHHHHHHcccccccccccEEEEEccccHHHHHHHHHcccccCCcccccHHHHHHHHHHHccccccccccccc
MLAILIGLLTVLTWHFTRVYTTKSLDTLAYGLRYELLQRPLLRMWNIVNSTAEITAAQVKLSEYVIKRYNKPATQAEQIQLYEVMRDVTWAMFASRKALNAITINYKNGFVQAFHRDHRSNNTFYIYSDLSNYSIGTSGPYDSNLISSREGWNDQSIKGNISAIWYREPLDPITGEKIGKASPIPPDDLINIAGISQVPDGVASWHVAVSKFTNSPLLSAALPVWDPTTSNKSIVAVVGVTTALSSVGQLMKELVEVHSGHIYLTSQEGYLLATSTNAPLLT**S****LVKAVDSDNPVIQMGAQWLQSEYGSKVPPGHVIHVQNAKLGHKQYYMDTFFLNLKRLPIVGVIIIPREYIMGKADERAYKTLIILISASVCILVIGCICILILTNGVSKEMKLRAELISHLDARRKA**SNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLD************KKFGRAF***********MNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIYDADFPNTVVVLATVGSMERMIISQWLRKKKVSTLETSEWHGLTQILRELLDPISPVSSNGFDAPYSSREPLKAEMTNIKALIDPVYVVVIDIALLDLSSDLWREQLNSLDIFHRKAMFAWVVNHQTTSPIKTELSREGQNIVVTKPLYKGKMIQLLETAVRGKILGMQNRISSTTNEGNGEEIRGSIANYSASKHQKFRKCSFEFSSICPGESSSRREDLIHTMFRERHQIGSSR****************ILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLA*****************PDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTILR**************
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MLAILIGLLTVLTWHFTRVYTTKSLDTLAYGLRYELLQRPLLRMWNIVNSTAEITAAQVKLSEYVIKRYNKPATQAEQIQLYEVMRDVTWAMFASRKALNAITINYKNGFVQAFHRDHRSNNTFYIYSDLSNYSIGTSGPYDSNLISSREGWNDQSIKGNISAIWYREPLDPITGEKIGKASPIPPDDLINIAGISQVPDGVASWHVAVSKFTNSPLLSAALPVWDPTTSNKSIVAVVGVTTALSSVGQLMKELVEVHSGHIYLTSQEGYLLATSTNAPLLTNSSTGPNLVKAVDSDNPVIQMGAQWLQSEYGSKVPPGHVIHVQNAKLGHKQYYMDTFFLNLKRLPIVGVIIIPREYIMGKADERAYKTLIILISASVCILVIGCICILILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGxxxxxxxxxxxxxxxxxxxxxFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIYDADFPNTVVVLATVGSMERMIISQWLRKKKVSTLETSEWHGLTQILRELLDPISPVSSNGFDAPYSSREPLKAEMTNIKALIDPVYVVVIDIALLDLSSDLWREQLNSLDIFHRKAMFAWVVNHQTTSPIKTELSREGQNIVVTKPLYKGKMIQLLETAVRGKILGMQNRISSTTNEGNGEEIRGSIANYSASKHQKFRKCSFEFSSICPGESSSRREDLIHTMFRERHQIGSSRRDQPCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTILRLTKNMPSEATGTTR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Histidine kinase 1 Functions as an osmosensor histidine kinase that detects water stress and transmits the stress signal to a downstream MAPK cascade. This protein undergoes an ATP-dependent autophosphorylation at a conserved histidine residue in the kinase core, and a phosphoryl group is then transferred to a conserved aspartate residue in the receiver domain. Positive regulator of drought and salt stress responses, and abscisic acid (ABA) signaling. Confers drought tolerance, probably by regulating levels of ABA accumulation. Plays a redundant role in regulating plant growth and development. Required for the regulation of desiccation processes during seed formation.probableQ9SXL4

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.13.-Protein-histidine kinases.probable
2.7.13.3Histidine kinase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2C2A, chain A
Confidence level:very confident
Coverage over the Query: 414-567,608-686
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Template: 2AYX, chain A
Confidence level:very confident
Coverage over the Query: 948-991,1015-1096
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Template: 1W25, chain A
Confidence level:very confident
Coverage over the Query: 702-742,777-864,894,922-991,1015-1094
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Template: 3MM4, chain A
Confidence level:confident
Coverage over the Query: 694-745,767-854
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Template: 3LIC, chain A
Confidence level:probable
Coverage over the Query: 23-170,199-277
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Template: 3LID, chain A
Confidence level:probable
Coverage over the Query: 84-129,155-185,198-278
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Template: 4FMT, chain A
Confidence level:probable
Coverage over the Query: 416-563,602-678
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Template: 3F7A, chain A
Confidence level:probable
Coverage over the Query: 972-1081
View the alignment between query and template
View the model in PyMOL