Citrus Sinensis ID: 001313

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100--
MGGSKSKMVVMFVLLLIIFEGGWSEGCLNHERFALLQLKLFFIDPYNYLLDWVDDEGATDCCQWERVSCNNTMGRVVVLDLSQTHRGEYWYLNASLFTPFQQLESLDLRDNDIAGCVENEGLERLSRLSNLKMLNLVGNLFNNSILSSLARLSSLTSLDLSANRLKGSIDIKELDSLRDLEKLNIGRNMIDKFVVSKGPKRLSRLNNLKVFDLSGNLFNNSILSSLARLSSLRSLLLYDNRLEGSIDVKEFDSLSNLEELDMSYNEIDNFEVPQACSGLRKLSYLHLLRVGIRDGSKLLQSMGSFPSLNTLDLSYNNFTETVTTTTQGFPHFKSLKELYMDDARIALNTSFLQIIGESMPSIQYLSLSNSSVSNNSRTLDQGLCPLVHLQELHMADNDLRGSLPWCLANMTSLRILDVSSNQLIGSISSSPLIHLTSIEDLILSDNHFQIPISLEPLFNHSRLKIFDAENNEINAEIIESHSLTTPNFQLQSLLLSSGYRDGITFPKFLYNQHDLEYVRLSHIKMNEEFPNWLLENNTKLRQLSLVNDSLVGPFRLPIHSHKQLRLLDVSKNNFQGHIPLEIGDILSRLTVFNISMNALDGSIPSSFGNMNFLQFLDLSNNQLTGEIPEHLAMGCVSLRSLALSNNNLEGHMFSRNFNLTNLIWLQLEGNHFVGEIPQSLSKCSSLQGLFLSNNSLSGKIPRWLGNLTVLRHIIMPKNHIEGPIPLEFCQLRILQILDISDNNISGSLPSCYDFVCIEQVHLSKNMLHGQLKEGTFFNCLTLMILDLSYNHLNGNIPDRVDGLSQLSYLILAHNNLEGEVPIQLCRLNQLQLLDLSNNNLHGHIPSCFDNTTLHERYNNGSSLQPFETSFVIMGGMDVDPKKQILESFDFTTKSITYTYQGRVPSLLSGLDLSCNRLIGHIPPQIGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSVAYNNLSGKIPERAAQFATFNESSYEGNPFLCGPPLPICISPTTMPEASPSNEGDNNLIDMDIFFITFTTSYVIVIFGIVAVLYVNARWRRRWFYLVEMWTTSCYYFVIDNLIPTRFCH
ccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccccccccccccccccccEEEccccccEEEEEccccccccccccccccccccccccEEEcccccccccccccccccccccccccEEEcccccccccccHHHcccccccEEEcccccccccccHHHHcccccccEEEcccccccccccccccccccccccccEEEcccccccccccccccccccccEEEcccccccccccHHHHcccccccEEEccccccccccccccccccccccEEEcccccccccccccccccccccccEEEccccccccccccccccccccccccEEEccccccccccccHHHHHHccccccCEEccccccccccccccccccccccccEEEcccccccccccccccccccccEEEccccccccccccccccccccccEEEccccccCECccHHcccccccccEEEcccccccEEcccccccccccccccEEEccccccccccccHHccccccccEEEcccccccccccHHHHHccccccEEEccccccCECccccccccccccEEEccccCEEECcccccccccccccEEEcccccccccccccccccccccEEEcccccccccccHHHHHccccccEEEccccCEcccccccccccccccEEEcccccccccccccccccccccEEEcccccccccccccccccccccEEEcccccccccccccccccccccEEEccccccCECcccccccccccEEEccccccCCcccHHHHcccccccEEEcccccccccccHHHHccccccEEEccccCEEEcccccccccccccEEEcccccccccccHHHHHcccccccccccccccccccEEEcccccccccccCEEEEEEEEcccCEECccccccccCEEEcccccccccccHHHHccccccccccccccccccccccccccccccEEccccccccccccHHHHcccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEHHHHHHHHHHHHEEEEEEEcccHHHHHHHHHHHHccEEEEEEEEEECcccccc
****KSKMVVMFVLLLIIFEGGWSEGCLNHERFALLQLKLFFIDPYNYLLDWVDDEGATDCCQWERVSCNNTMGRVVVLDLSQTHRGEYWYLNASLFTPFQQLESLDLRDNDIAGCVENEGLERLSRLSNLKMLNLVGNLFNNSILSSLARLSSLTSLDLSANRLKGSIDIKELDSLRDLEKLNIGRNMIDKFVVSKGPKRLSRLNNLKVFDLSGNLFNNSILSSLARLSSLRSLLLYDNRLEGSIDVKEFDSLSNLEELDMSYNEIDNFEVPQACSGLRKLSYLHLLRVGIRDGSKLLQSMGSFPSLNTLDLSYNNFTETVTTTTQGFPHFKSLKELYMDDARIALNTSFLQIIGESMPSIQYLSLSNSSVSNNSRTLDQGLCPLVHLQELHMADNDLRGSLPWCLANMTSLRILDVSSNQLIGSISSSPLIHLTSIEDLILSDNHFQIPISLEPLFNHSRLKIFDAENNEINAEIIESHSLTTPNFQLQSLLLSSGYRDGITFPKFLYNQHDLEYVRLSHIKMNEEFPNWLLENNTKLRQLSLVNDSLVGPFRLPIHSHKQLRLLDVSKNNFQGHIPLEIGDILSRLTVFNISMNALDGSIPSSFGNMNFLQFLDLSNNQLTGEIPEHLAMGCVSLRSLALSNNNLEGHMFSRNFNLTNLIWLQLEGNHFVGEIPQSLSKCSSLQGLFLSNNSLSGKIPRWLGNLTVLRHIIMPKNHIEGPIPLEFCQLRILQILDISDNNISGSLPSCYDFVCIEQVHLSKNMLHGQLKEGTFFNCLTLMILDLSYNHLNGNIPDRVDGLSQLSYLILAHNNLEGEVPIQLCRLNQLQLLDLSNNNLHGHIPSCFDNTTLHERYNNGSSLQPFETSFVIMGGMDVDPKKQILESFDFTTKSITYTYQGRVPSLLSGLDLSCNRLIGHIPPQIGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSVAYNNLSGKIPERAAQFATFNESSYEGNPFLCGPPLPICIS***************NLIDMDIFFITFTTSYVIVIFGIVAVLYVNARWRRRWFYLVEMWTTSCYYFVIDNLIPTRFCH
xxxxxxxxHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MGGSKSKMVVMFVLLLIIFEGGWSEGCLNHERFALLQLKLFFIDPYNYLLDWVDDEGATDCCQWERVSCNNTMGRVVVLDLSQTHRGEYWYLNASLFTPFQQLESLDLRDNDIAGCVENEGLERLSRLSNLKMLNLVGNLFNNSILSSLARLSSLTSLDLSANRLKGSIDIKELDSLRDLEKLNIGRNMIDKFVVSKGPKRLSRLNNLKVFDLSGNLFNNSILSSLARLSSLRSLLLYDNRLEGSIDVKEFDSLSNLEELDMSYNEIDNFEVPQACSGLRKLSYLHLLRVGIRDGSKLLQSMGSFPSLNTLDLSYNNFTETVTTTTQGFPHFKSLKELYMDDARIALNTSFLQIIGESMPSIQYLSLSNSSVSNNSRTLDQGLCPLVHLQELHMADNDLRGSLPWCLANMTSLRILDVSSNQLIGSISSSPLIHLTSIEDLILSDNHFQIPISLEPLFNHSRLKIFDAENNEINAEIIESHSLTTPNFQLQSLLLSSGYRDGITFPKFLYNQHDLEYVRLSHIKMNEEFPNWLLENNTKLRQLSLVNDSLVGPFRLPIHSHKQLRLLDVSKNNFQGHIPLEIGDILSRLTVFNISMNALDGSIPSSFGNMNFLQFLDLSNNQLTGEIPEHLAMGCVSLRSLALSNNNLEGHMFSRNFNLTNLIWLQLEGNHFVGEIPQSLSKCSSLQGLFLSNNSLSGKIPRWLGNLTVLRHIIMPKNHIEGPIPLEFCQLRILQILDISDNNISGSLPSCYDFVCIEQVHLSKNMLHGQLKEGTFFNCLTLMILDLSYNHLNGNIPDRVDGLSQLSYLILAHNNLEGEVPIQLCRLNQLQLLDLSNNNLHGHIPSCFDNTTLHERYNNGSSLQPFETSFVIMGGMDVDPKKQILESFDFTTKSITYTYQGRVPSLLSGLDLSCNRLIGHIPPQIGNLTKIQTLNLSHNNLAGPIPSTFSNLRNIESLDLSYNKLSWKIPYQLVELNTLAVFSVAYNNLSGKIPERAAQFATFNESSYEGNPFLCGPPLPICISPTTMPEASPSNEGDNNLIDMDIFFITFTTSYVIVIFGIVAVLYVNARWRRRWFYLVEMWTTSCYYFVIDNLIPTRFCH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4FMZ, chain A
Confidence level:very confident
Coverage over the Query: 586-746,771-851,905-987
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Template: 4FMZ, chain A
Confidence level:very confident
Coverage over the Query: 561-747,772-851,905-963
View the alignment between query and template
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Template: 2Z66, chain A
Confidence level:very confident
Coverage over the Query: 664-745,770-852,906-1017
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Template: 2XOT, chain A
Confidence level:very confident
Coverage over the Query: 735-852,906-967
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Template: 2Z81, chain A
Confidence level:very confident
Coverage over the Query: 359-452,505-681,699-851,905-970
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Template: 1H6T, chain A
Confidence level:very confident
Coverage over the Query: 98-270,300-320
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Template: 1OGQ, chain A
Confidence level:very confident
Coverage over the Query: 25-171,200-271,299-304,359-447
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Template: 1ZIW, chain A
Confidence level:very confident
Coverage over the Query: 359-476,505-852,906-1019
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Template: 3RGZ, chain A
Confidence level:very confident
Coverage over the Query: 130-168,199-274,299-324,356-435,562-1013
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Template: 3OGK, chain B
Confidence level:very confident
Coverage over the Query: 204-274,298-477,505-651
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Template: 3FXI, chain A
Confidence level:confident
Coverage over the Query: 129-287,310-401,416-649,674-750
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Template: 3FXI, chain A
Confidence level:probable
Coverage over the Query: 129-287,310-401,416-649,674-750
View the alignment between query and template
View the model in PyMOL