Citrus Sinensis ID: 001335
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1097 | 2.2.26 [Sep-21-2011] | |||||||
| Q9XIE6 | 1213 | Phospholipid-transporting | yes | no | 0.971 | 0.878 | 0.794 | 0.0 | |
| Q9LI83 | 1202 | Phospholipid-transporting | no | no | 0.948 | 0.865 | 0.486 | 0.0 | |
| Q9SX33 | 1200 | Putative phospholipid-tra | no | no | 0.946 | 0.865 | 0.480 | 0.0 | |
| Q9SAF5 | 1203 | Putative phospholipid-tra | no | no | 0.948 | 0.865 | 0.481 | 0.0 | |
| Q9LNQ4 | 1216 | Putative phospholipid-tra | no | no | 0.942 | 0.850 | 0.474 | 0.0 | |
| P57792 | 1184 | Putative phospholipid-tra | no | no | 0.945 | 0.875 | 0.474 | 0.0 | |
| Q9SGG3 | 1228 | Putative phospholipid-tra | no | no | 0.938 | 0.838 | 0.466 | 0.0 | |
| Q9LVK9 | 1243 | Putative phospholipid-tra | no | no | 0.932 | 0.823 | 0.462 | 0.0 | |
| Q9LK90 | 1189 | Putative phospholipid-tra | no | no | 0.945 | 0.872 | 0.461 | 0.0 | |
| Q9SLK6 | 1240 | Phospholipid-transporting | no | no | 0.927 | 0.820 | 0.460 | 0.0 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1838 bits (4762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 853/1073 (79%), Positives = 975/1073 (90%), Gaps = 7/1073 (0%)
Query: 19 SSRHRRTPSRTVTLGRVQPQAPNFRTIYCNDREANQPLRFKGNSIATTKYNVLTFLPKGL 78
S+ H+RTPSRTVTLG +QPQAP +RT+YCNDRE+NQP+RFKGNSI+TTKYNV TFLPKGL
Sbjct: 12 SATHQRTPSRTVTLGHIQPQAPTYRTVYCNDRESNQPVRFKGNSISTTKYNVFTFLPKGL 71
Query: 79 FEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTI 138
FEQFRR+AN YFL IS LS TP+SPV+P+TNV PLS+VLLVSLIKEA+EDWKRFQNDM+I
Sbjct: 72 FEQFRRIANIYFLGISCLSMTPISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSI 131
Query: 139 NSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDG 198
N++ VE+LQ Q+WVSIPWRKLQVGDIV +K+DGFFPAD+LF++STN+DG+CY+ETANLDG
Sbjct: 132 NNSTVEILQDQQWVSIPWRKLQVGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDG 191
Query: 199 ETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQIL 258
ETNLKIRKALERTWDYL PEKA EFKGE+QCEQPNNSLYTFTGNL++QKQTLPL+P+Q+L
Sbjct: 192 ETNLKIRKALERTWDYLVPEKAYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLL 251
Query: 259 LRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLI 318
LRGCSLRNTEYI+GAV+F GHETKVMMN+MN PSKRSTLE+KLDKLI+ +F L MCLI
Sbjct: 252 LRGCSLRNTEYIVGAVVFTGHETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLI 311
Query: 319 CAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYV 378
AIG +I D++ YLGLHN + ++ FTL+TL+S IIPISLYV
Sbjct: 312 GAIGCSIVTDREDKYLGLHN-------SDWEYRNGLMIGFFTFFTLVTLFSSIIPISLYV 364
Query: 379 SIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 438
SIE IKF QSTQ+IN+DL+MYHAE+NTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME
Sbjct: 365 SIEMIKFIQSTQFINRDLNMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 424
Query: 439 FFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNE 498
FFKCSIGG YG G+TEIE+G+AQ+ G+K+ E +RS A+ EKGFNFDDPRL+RGAWRNE
Sbjct: 425 FFKCSIGGVSYGCGVTEIEKGIAQRHGLKVQEEQRSTGAIREKGFNFDDPRLMRGAWRNE 484
Query: 499 HNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTM 558
NPD CKE FRCLAICHTVLPEGDESPE+I YQAASPDEAALVTAAKNFGFFFYRRTPTM
Sbjct: 485 PNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTM 544
Query: 559 IYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERL 618
+YVRESHVEKMGK+QDV YEILNVLEFNSTRKRQSVVCR+ DGRLVLYCKGAD+VI+ERL
Sbjct: 545 VYVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERL 604
Query: 619 ANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLD 678
ANG +D++KVTREHLE FGSSGLRTLCLAY+DL+P+ Y+ WNEKFIQAKS+LRDRE+KLD
Sbjct: 605 ANGMDDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALRDREKKLD 664
Query: 679 EVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738
EVAELIEKDL LIG TAIEDKLQEGVP CIETL+RAGIKIWVLTGDKMETAINIAYACNL
Sbjct: 665 EVAELIEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNL 724
Query: 739 INNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKL 798
INNEMKQF+I+SET+AIR+ EERGD VEIAR ++EEVKREL K ++EAQ +H+++G KL
Sbjct: 725 INNEMKQFVISSETDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGPKL 784
Query: 799 ALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858
+L+IDGKCLMYALDPSLRV+LL+LSLNC+SVVCCRVSPLQKAQVTSLV+KGA+KITLSIG
Sbjct: 785 SLVIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIG 844
Query: 859 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVL 918
DGANDVSMIQAAH+G+GISG EGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVV+
Sbjct: 845 DGANDVSMIQAAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVM 904
Query: 919 YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLS 978
YFFYKNLTFTLTQFWFTF+TGFSGQRFYDDWFQSL+NV+FT++PVI+LGLFEKDVSASLS
Sbjct: 905 YFFYKNLTFTLTQFWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLS 964
Query: 979 KKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSGKIFGIWDVS 1038
K+YP+LY+EGI+N FF WRVVA+WA +VYQSLV Y VTTSS NSSGK+FG+WDVS
Sbjct: 965 KRYPELYREGIRNSFFKWRVVAVWATSAVYQSLVCYLFVTTSSFGAVNSSGKVFGLWDVS 1024
Query: 1039 TMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDR 1091
TM FTC+V+ VN+R+L+M N+ITR+HYITVGGSILAW +F F+Y GIMTP+DR
Sbjct: 1025 TMVFTCLVIAVNVRILLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPHDR 1077
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|Q9LI83|ALA10_ARATH Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/1072 (48%), Positives = 704/1072 (65%), Gaps = 32/1072 (2%)
Query: 39 APNF-RTIYCND--REANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISI 95
P F R +YCN+ A + + GN + +TKY V +F PK LFEQFRRVAN YFL+ I
Sbjct: 35 GPGFSRVVYCNEPGSPAAERRNYAGNYVRSTKYTVASFFPKSLFEQFRRVANFYFLVTGI 94
Query: 96 LSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQR-WVSI 154
LS T +SP V+ ++PL+LV+ +++KE EDW+R Q D+ +N+ V+V G +
Sbjct: 95 LSLTDLSPYGAVSALLPLALVISATMVKEGIEDWRRKQQDIEVNNRKVKVHDGNGIFRQE 154
Query: 155 PWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDY 214
WR L+VGDIV V++D FFPADLL L+S+ D VCY+ET NLDGETNLK+++ LE T
Sbjct: 155 EWRNLRVGDIVRVEKDEFFPADLLLLSSSYEDSVCYVETMNLDGETNLKVKQGLEATSSL 214
Query: 215 LTPEKA-SEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGA 273
L + +F+G V+CE PN +LY F G L ++++ PL+ QILLR LRNTEY+ GA
Sbjct: 215 LNQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEERFPLSIQQILLRDSKLRNTEYVYGA 274
Query: 274 VIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAI--GSAIFIDK-- 329
V+F GH+TKV+ NS + PSKRS +ER +DK+I +F + +M + +I G DK
Sbjct: 275 VVFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMFGLVFLMSFVGSIIFGVETREDKVK 334
Query: 330 ----KHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKF 385
+ +YL + D F+P++ + + + FT LYS IPISLYVSIE +K
Sbjct: 335 NGRTERWYLKPDDA-----DIFFDPERAPMAAIYHFFTATMLYSYFIPISLYVSIEIVKV 389
Query: 386 FQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIG 445
QS +IN+D+HMY+ E++ PA ARTSNLNEELG V+ I SDKTGTLT N MEF KCSI
Sbjct: 390 LQSI-FINRDIHMYYEETDKPAQARTSNLNEELGMVDTILSDKTGTLTCNSMEFIKCSIA 448
Query: 446 GEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHE------KGFNFDDPRLLRGAWRNEH 499
G+ YG GITE+ER +A ++G P V + V + KGFNF+D R++ G W +
Sbjct: 449 GKAYGRGITEVERAMAVRSGGS-PLVNEDLDVVVDQSGPKVKGFNFEDERVMNGNWVRQP 507
Query: 500 NPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMI 559
++FFR LA+CHT +PE DE ++Y+A SPDEAA V AA+ FGF F+ RT I
Sbjct: 508 EAAVLQKFFRLLAVCHTAIPETDEESGNVSYEAESPDEAAFVVAAREFGFEFFNRTQNGI 567
Query: 560 YVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLA 619
RE + K++ V Y +LNVLEFNSTRKR SV+ R DG+L+L KGAD+V++ERLA
Sbjct: 568 SFRELDLVSGEKVERV-YRLLNVLEFNSTRKRMSVIVRDDDGKLLLLSKGADNVMFERLA 626
Query: 620 NGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSL-RDREQKLD 678
+ T+EH+ Q+ +GLRTL LAYR++ + Y +N+ F +AK+S+ DRE +D
Sbjct: 627 KNGRQFEAKTQEHVNQYADAGLRTLVLAYREVDENEYIEFNKSFNEAKASVSEDREALID 686
Query: 679 EVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738
E+ + +E+DL L+G TA+EDKLQ GVP CI+ LA+AGIKIWVLTGDKMETAINI +A +L
Sbjct: 687 EITDKMERDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFASSL 746
Query: 739 INNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKL 798
+ EMKQ II ET I+ +E+ G EI RE V +L + +A S E
Sbjct: 747 LRQEMKQIIINLETPQIKSLEKSGGKDEIELASRESVVMQLQE--GKALLAASGASSEAF 804
Query: 799 ALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858
ALIIDGK L YAL+ ++ + L+L+ +C+SV+CCR SP QKA VT LVK G K TL+IG
Sbjct: 805 ALIIDGKSLTYALEDEIKKMFLDLATSCASVICCRSSPKQKALVTRLVKSGTGKTTLAIG 864
Query: 859 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVL 918
DGANDV M+Q A IGVGISG EGMQAVM+SD AIAQFR+L LLLVHG W Y RI ++
Sbjct: 865 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRIASMIC 924
Query: 919 YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLS 978
YFFYKN+TF +T F + T FSGQ Y+DWF SL+NV F+S+PVI LG+F++DVSA
Sbjct: 925 YFFYKNITFGVTVFLYEAYTSFSGQPAYNDWFLSLFNVFFSSLPVIALGVFDQDVSARFC 984
Query: 979 KKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSL-VLYNCVTTSSATGQNSSGKIFGIWDV 1037
K+P LYQEG++N+ F+W+ + W F +L + + C + + GK G +
Sbjct: 985 YKFPLLYQEGVQNILFSWKRIIGWMFNGFISALAIFFLCKESLKHQLFDPDGKTAGREIL 1044
Query: 1038 STMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1089
+TCVV VNL++ + + T +I + GSI W++F+ +Y G MTP+
Sbjct: 1045 GGTMYTCVVWVVNLQMALSISYFTWVQHIVIWGSIAFWYIFLMIY-GAMTPS 1095
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SX33|ALA9_ARATH Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/1070 (48%), Positives = 706/1070 (65%), Gaps = 32/1070 (2%)
Query: 36 QPQAPNF-RTIYCNDREANQP--LRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLM 92
Q P F R +YCN+ ++ + + N + TTKY + TFLPK LFEQFRRVAN YFL+
Sbjct: 34 QIGGPGFSRVVYCNEPDSPEADSRNYSDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLV 93
Query: 93 ISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQ-RW 151
+L+ TP++P + +VPL V+ +++KE EDW+R + D +N+ V+V +G +
Sbjct: 94 TGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGVEDWRRQKQDNEVNNRKVKVHRGDGSF 153
Query: 152 VSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERT 211
+ W+ L +GDIV V+++ FFPADL+ L+S+ D +CY+ET NLDGETNLK+++ LE T
Sbjct: 154 DAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYEDAICYVETMNLDGETNLKVKQGLEVT 213
Query: 212 WDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYII 271
F+ V+CE PN +LY+F G + ++ PL+P Q+LLR LRNT++I
Sbjct: 214 SSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYPLSPQQLLLRDSKLRNTDFIF 273
Query: 272 GAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIF----- 326
GAVIF GH+TKV+ NS + PSKRS +E+K+DK+I +F + M I GS IF
Sbjct: 274 GAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFMVITMAFI---GSVIFGVTTR 330
Query: 327 IDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFF 386
D K + + F+P + + + + T + LYS IPISLYVSIE +K
Sbjct: 331 DDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYSYFIPISLYVSIEIVKVL 390
Query: 387 QSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGG 446
QS +IN+D+HMY+ E++ PA ARTSNLNEELGQV+ I SDKTGTLT N MEF KCS+ G
Sbjct: 391 QSI-FINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAG 449
Query: 447 EIYGTGITEIERGVAQQTGMKIP--------EVERSVKAVHE----KGFNFDDPRLLRGA 494
YG G+TE+E + ++ G + ++E S +A+ E KGFNF D R++ G
Sbjct: 450 TAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITEESTVKGFNFRDERIMNGN 509
Query: 495 WRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRR 554
W E + D ++FFR LA+CHTV+PE DE E+I+Y+A SPDEAA V AA+ GF F+ R
Sbjct: 510 WVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEAAFVIAARELGFEFFNR 569
Query: 555 TPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVI 614
T T I VRE + GK + Y++LNVLEFNSTRKR SV+ + DG+L+L CKGAD+V+
Sbjct: 570 TQTTISVRELDLVS-GKRVERLYKVLNVLEFNSTRKRMSVIVQEEDGKLLLLCKGADNVM 628
Query: 615 YERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLR-DR 673
+ERL+ + ++ TR+H+ ++ +GLRTL LAYR+L Y+ +NE+ +AKSS+ DR
Sbjct: 629 FERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEKEYKVFNERISEAKSSVSADR 688
Query: 674 EQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIA 733
E ++EV E IEKDL L+G TA+EDKLQ GVP CI+ LA+AGIKIWVLTGDKMETAINI
Sbjct: 689 ESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIG 748
Query: 734 YACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSI 793
+AC+L+ +MKQ II ET I+ +E+ G+ IA+ +E V L++ I+ Q +S
Sbjct: 749 FACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKENV---LSQIINGKTQLKYS- 804
Query: 794 SGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKI 853
G ALIIDGK L YALD ++ I L L+++C+SV+CCR SP QKA VT LVK G K
Sbjct: 805 GGNAFALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSSPKQKALVTRLVKSGNGKT 864
Query: 854 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRI 913
TL+IGDGANDV M+Q A IGVGISG EGMQAVM+SD AIAQFR+L LLLVHG W Y RI
Sbjct: 865 TLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRI 924
Query: 914 CKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDV 973
++ YFFYKN+TF T F + T FS Y+DWF SLYNV F+S+PVI LG+F++DV
Sbjct: 925 STMICYFFYKNITFGFTLFLYETYTTFSSTPAYNDWFLSLYNVFFSSLPVIALGVFDQDV 984
Query: 974 SASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYN-CVTTSSATGQNSSGKIF 1032
SA K+P LYQEG++NV F+WR + W F Y +++++ C ++ + N GK
Sbjct: 985 SARYCLKFPLLYQEGVQNVLFSWRRILGWMFNGFYSAVIIFFLCKSSLQSQAFNHDGKTP 1044
Query: 1033 GIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLY 1082
G + +TC+V VNL++ + + T +I + SI+ W+ F+ +Y
Sbjct: 1045 GREILGGTMYTCIVWVVNLQMALAISYFTLIQHIVIWSSIVVWYFFITVY 1094
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SAF5|ALA11_ARATH Putative phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 984 bits (2543), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/1074 (48%), Positives = 698/1074 (64%), Gaps = 33/1074 (3%)
Query: 39 APNF-RTIYCNDREANQPL----RFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMI 93
P F R +YCN E N P + GN + +TKY + +F+PK LFEQFRRVAN YFL+
Sbjct: 33 GPGFSRVVYCN--EPNSPAAERRNYVGNYVRSTKYTLASFIPKSLFEQFRRVANFYFLVT 90
Query: 94 SILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQR-WV 152
+LS T +SP +P++ ++PL+ V+ S++KEA EDW R + D+ +N+ V+V G +
Sbjct: 91 GVLSLTALSPYSPISALLPLTFVIAASMVKEAIEDWGRKKQDIEMNNRKVKVHDGNGIFR 150
Query: 153 SIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTW 212
WR L+VG+IV V++D FFPADLL L+S+ D +CY+ET NLDGETNLK+++ LE T
Sbjct: 151 REGWRDLKVGNIVRVEKDEFFPADLLLLSSSYEDSICYVETMNLDGETNLKVKQGLEATS 210
Query: 213 DYLTPEKA-SEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYII 271
L + E K V+CE PN LYTF G L ++Q LPL+ Q+LLR LRNTEYI
Sbjct: 211 SALHEDSDFKELKAVVKCEDPNADLYTFVGTLHFEEQRLPLSITQLLLRDSKLRNTEYIY 270
Query: 272 GAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDK-- 329
G V+F GH+TKV+ NS + PSKRS +ERK+DK+I +F + +M I +I I +
Sbjct: 271 GVVVFTGHDTKVIQNSTDPPSKRSRIERKMDKIIYLMFGVVFLMSFIGSIVFGIETREDR 330
Query: 330 -------KHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIET 382
+ +YL N D F+PD+ + V + FT + LYS IPISLYVSIE
Sbjct: 331 VRNGGRTERWYLRPDNA-----DIFFDPDRAPMAAVYHFFTAVMLYSYFIPISLYVSIEI 385
Query: 383 IKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKC 442
+K QS +IN D+ MY+ E++ PA ARTSNLNEELG V+ I SDKTGTLT N MEF KC
Sbjct: 386 VKVLQSL-FINNDILMYYEENDKPAHARTSNLNEELGMVDTILSDKTGTLTCNSMEFIKC 444
Query: 443 SIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHE-----KGFNFDDPRLLRGAWRN 497
SI G YG GITE+ER +A ++ + V + KGFNF D R+++G W
Sbjct: 445 SIAGTAYGRGITEVERSMAMRSNGSSLVGDDLDVVVDQSGPKIKGFNFLDERVMKGNWVK 504
Query: 498 EHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPT 557
+ + ++FFR LA+CHT +PE DE+ ++Y+A SPDEAA V AA+ FGF F+ RT
Sbjct: 505 QRDAAVLQKFFRLLAVCHTAIPETDEATGSVSYEAESPDEAAFVVAAREFGFEFFSRTQN 564
Query: 558 MIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYER 617
I RE + GK + Y +LNVLEFNS RKR SV+ R DGRL+L KGAD+V++ER
Sbjct: 565 GISFRELDLAS-GKTVERVYRLLNVLEFNSARKRMSVIVRDEDGRLLLLSKGADNVMFER 623
Query: 618 LANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSL-RDREQK 676
LA ++ TREH+ ++ +GLRTL LAYR++ + Y +++ F +AK+S+ DRE
Sbjct: 624 LAKNGRKFEEKTREHVNEYADAGLRTLILAYREVDENEYIEFSKNFNEAKNSVTADRESL 683
Query: 677 LDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 736
+DE+ E +E+DL L+G TA+EDKLQ GVP CI+ LA+AGIKIWVLTGDKMETAINI +AC
Sbjct: 684 IDEITEQMERDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 743
Query: 737 NLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGE 796
+L+ EMKQ II ET I+ +E+ G+ I RE V ++ + + S E
Sbjct: 744 SLLRQEMKQIIINLETPHIKALEKAGEKDAIEHASRESVVNQMEEGKALLTASSSASSHE 803
Query: 797 KLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLS 856
ALIIDGK L YAL+ + L+L+ C+SV+CCR SP QKA VT LVK G K TL+
Sbjct: 804 AFALIIDGKSLTYALEDDFKKKFLDLATGCASVICCRSSPKQKALVTRLVKSGTGKTTLA 863
Query: 857 IGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKV 916
IGDGANDV M+Q A IGVGISG EGMQAVM+SD AIAQFR+L LLLVHG W Y RI +
Sbjct: 864 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRISSM 923
Query: 917 VLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSAS 976
+ YFFYKN+TF +T F + T FS Q Y+DWF SL+NV F+S+PVI LG+F++DVSA
Sbjct: 924 ICYFFYKNITFGVTVFLYEAYTSFSAQPAYNDWFLSLFNVFFSSLPVIALGVFDQDVSAR 983
Query: 977 LSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSL-VLYNCVTTSSATGQNSSGKIFGIW 1035
K+P LYQEG++N+ F+W+ + W F V+ +L + + C + N +GK G
Sbjct: 984 YCYKFPLLYQEGVQNLLFSWKRIIGWMFNGVFTALAIFFLCKESLKHQLYNPNGKTAGRE 1043
Query: 1036 DVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1089
+ +TCVV VNL++ + + T +I + GS+ W++F+ +Y G +TP+
Sbjct: 1044 ILGGTMYTCVVWVVNLQMALAISYFTWLQHIVIWGSVAFWYIFLMIY-GAITPS 1096
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 980 bits (2533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/1081 (47%), Positives = 703/1081 (65%), Gaps = 47/1081 (4%)
Query: 38 QAPNF-RTIYCNDREANQ--PLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMIS 94
Q P F RT+YCN ++ PL+++ N ++TT+YN++TF PK L+EQF R AN YFL+ +
Sbjct: 35 QGPGFSRTVYCNQPHMHKKKPLKYRSNYVSTTRYNLITFFPKCLYEQFHRAANFYFLVAA 94
Query: 95 ILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQ-RWVS 153
ILS P+SP N + + PL V+ +S++KEA EDW RF D+ IN++ V V + +
Sbjct: 95 ILSVFPLSPFNKWSMIAPLVFVVGLSMLKEALEDWSRFMQDVKINASKVYVHKSDGEFRR 154
Query: 154 IPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWD 213
W+K+ VGDIV V++DGFFPADLL L+S+ DG+CY+ET NLDGETNLK++++LE T
Sbjct: 155 RKWKKISVGDIVKVEKDGFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEVTLS 214
Query: 214 YLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGA 273
+ +F G ++CE PN SLYTF GNL ++Q PL+P+QILLR LRNT Y+ G
Sbjct: 215 LDDYDSFKDFTGIIRCEDPNPSLYTFVGNLEYERQIFPLDPSQILLRDSKLRNTPYVYGV 274
Query: 274 VIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAI---FIDKK 330
V+F GH+TKVM NS PSKRS +E+ +D +I L L ++ I + G A F K
Sbjct: 275 VVFTGHDTKVMQNSTKSPSKRSRIEKTMDYIIYTLLVLLILISCISSSGFAWETKFHMPK 334
Query: 331 HYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQ 390
+YL N NP +++ T + LY +IPISLYVSIE +K Q++
Sbjct: 335 WWYLRPEEPENLT-----NPSNPVYAGFVHLITALLLYGYLIPISLYVSIEVVKVLQAS- 388
Query: 391 YINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYG 450
+INKDLHMY +ES PA ARTSNLNEELGQV+ I SDKTGTLT N M+F KCSI G YG
Sbjct: 389 FINKDLHMYDSESGVPAHARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYG 448
Query: 451 TGITEIERGVAQQTGMKIPE-------------------VERSVKA-VHEKGFNFDDPRL 490
+E+E AQQ + + E VE S+ + KGF F+D RL
Sbjct: 449 VRSSEVEVAAAQQMAVDLDEHGEVSSRTSTPRAQARDIEVESSITPRIPIKGFGFEDIRL 508
Query: 491 LRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFF 550
+ G W E + D FFR LAICHT +PE +E + TY+A SPDEA+ +TAA FGF
Sbjct: 509 MDGNWLREPHTDDILLFFRILAICHTAIPELNEETGKYTYEAESPDEASFLTAASEFGFV 568
Query: 551 FYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGA 610
F++RT + +YV E + G+ + Y++LN+L+F S RKR SVV R +G+++L CKGA
Sbjct: 569 FFKRTQSSVYVHE-RLSHSGQTIEREYKVLNLLDFTSKRKRMSVVVRDEEGQILLLCKGA 627
Query: 611 DSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSL 670
DS+I+ERLA + T +HL ++G +GLRTL L+YR L + Y WN +F +AK+S+
Sbjct: 628 DSIIFERLAKNGKVYLGPTTKHLNEYGEAGLRTLALSYRKLDEEEYSAWNAEFHKAKTSI 687
Query: 671 -RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETA 729
DR++ L+ ++++IEKDL L+G TA+EDKLQ+GVP CI+ LA+AG+K+WVLTGDKMETA
Sbjct: 688 GSDRDELLERISDMIEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETA 747
Query: 730 INIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQY 789
INI Y+C+L+ MKQ IT V G + A+ +++ + ++ K + +
Sbjct: 748 INIGYSCSLLRQGMKQICITV-------VNSEGASQD-AKAVKDNILNQITKAVQMVK-- 797
Query: 790 IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG 849
+ ALIIDGK L YAL+ ++ L L+++C+SV+CCRVSP QKA VT LVK+G
Sbjct: 798 LEKDPHAAFALIIDGKTLTYALEDEMKYQFLALAVDCASVICCRVSPKQKALVTRLVKEG 857
Query: 850 ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWS 909
KITL+IGDGANDV MIQ A IGVGISG EGMQAVMASDF+IAQFRFL LL+VHG W
Sbjct: 858 TGKITLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWC 917
Query: 910 YLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLF 969
Y RI +++ YFFYKN+ F LT F+F TGFSGQ Y+D++ L+NV+ TS+PVI LG+F
Sbjct: 918 YKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLFNVVLTSLPVIALGVF 977
Query: 970 EKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNC-VTTSSATGQNSS 1028
E+DVS+ + ++P LYQ+G KN+FF W + W VY SLV++ + S
Sbjct: 978 EQDVSSEICLQFPALYQQGKKNLFFDWYRILGWMGNGVYSSLVIFFLNIGIIYEQAFRVS 1037
Query: 1029 GKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTP 1088
G+ + V T FTC++ VN+++ + + T ++ + GSI W+LFV LY G+M P
Sbjct: 1038 GQTADMDAVGTTMFTCIIWAVNVQIALTVSHFTWIQHVLIWGSIGLWYLFVALY-GMMPP 1096
Query: 1089 N 1089
+
Sbjct: 1097 S 1097
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P57792|ALA12_ARATH Putative phospholipid-transporting ATPase 12 OS=Arabidopsis thaliana GN=ALA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 973 bits (2516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/1058 (47%), Positives = 698/1058 (65%), Gaps = 21/1058 (1%)
Query: 43 RTIYCN--DREANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP 100
R ++CN D + + N + TTKY + TFLPK LFEQFRRVAN YFL++ ILS TP
Sbjct: 42 RVVFCNQPDSPEAESRNYCDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVVGILSFTP 101
Query: 101 MSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSI-PWRKL 159
++P V+ +VPL+ V+L ++ KE EDW+R Q D+ +N+ V V +G + W+ L
Sbjct: 102 LAPYTAVSAIVPLTFVILATMFKEGVEDWRRKQQDIEVNNRKVRVHRGNGNFDLREWKTL 161
Query: 160 QVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEK 219
+VGDI+ V+++ FFPADL+ L+S+ D VCY+ET NLDGETNLK+++ LE T
Sbjct: 162 RVGDILKVEKNEFFPADLVLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTLSLREELN 221
Query: 220 ASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGH 279
+F+ ++CE PN +LY+F G + ++ + PL+P Q+LLRG LRNT+YI G VIF G
Sbjct: 222 FRDFEAFIKCEDPNANLYSFVGTMDLKGEKYPLSPQQLLLRGSKLRNTDYIYGVVIFTGP 281
Query: 280 ETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNM 339
+TKV+ NS + PSKRS +ERK+DK+I +F + + ++ I+ + + G+
Sbjct: 282 DTKVVQNSTDPPSKRSMIERKMDKIIYLMFLMVFSLAFFGSVLFGIWT-RDDFQNGVMER 340
Query: 340 GNSVEDDQ---FNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDL 396
DD F+P + + + + T + L S IPISLYVSIE +K QS +IN+D+
Sbjct: 341 WYLKPDDSSIFFDPKRAPMAAIYHFLTALMLNSYFIPISLYVSIEIVKVLQSI-FINQDI 399
Query: 397 HMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEI 456
HMY+ E++ PA ARTSNLNEELGQV I SDKTGTLT N MEF KCSI G YG G+TE+
Sbjct: 400 HMYYEEADKPAHARTSNLNEELGQVGTILSDKTGTLTCNSMEFIKCSIAGTAYGRGVTEV 459
Query: 457 ERGVAQQTGMKI------PEVERSVKAVHE-KGFNFDDPRLLRGAWRNEHNPDACKEFFR 509
E + ++ G + E +V A KGFNF D R++ G W E + D ++FF+
Sbjct: 460 EMAMDKRKGSALVNQSNGNSTEDAVAAEPAVKGFNFRDERIMDGNWVTETHADVIQKFFQ 519
Query: 510 CLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKM 569
LA+CHTV+PE DE +I+Y+A SPDEAA V AA+ GF F+ RT T I VRE +
Sbjct: 520 LLAVCHTVIPEVDEDTGKISYEAESPDEAAFVIAARELGFEFFTRTQTTISVRELDL-VT 578
Query: 570 GKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVT 629
G+ + Y +LNVLEF+S++KR SV+ + DG+L+L CKGADSV++ERL+ +K T
Sbjct: 579 GERVERLYSVLNVLEFSSSKKRMSVIVQDQDGKLLLLCKGADSVMFERLSESGRKYEKET 638
Query: 630 REHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLR-DREQKLDEVAELIEKDL 688
R+H+ ++ +GLRTL LAYR+L + YE + E+ +AK+S+ DRE +DEV E IEK+L
Sbjct: 639 RDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSADREALIDEVTEKIEKNL 698
Query: 689 TLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFII 748
L+G TA+EDKLQ GVP CI LA+AGIKIWVLTGDKMETAINI +AC+L+ +MKQ II
Sbjct: 699 VLLGATAVEDKLQNGVPDCINKLAQAGIKIWVLTGDKMETAINIGFACSLLRRDMKQIII 758
Query: 749 TSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLM 808
ET I+ +E+ G+ IA ++E V ++ +AQ + + ALIIDGK L
Sbjct: 759 NLETPEIQQLEKSGEKDAIAA-LKENVLHQITS--GKAQLKASGGNAKAFALIIDGKSLA 815
Query: 809 YALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQ 868
YAL+ ++ I L L++ C+SV+CCR SP QKA VT LVK G+ + TL+IGDGANDV M+Q
Sbjct: 816 YALEEDMKGIFLELAIGCASVICCRSSPKQKALVTRLVKTGSGQTTLAIGDGANDVGMLQ 875
Query: 869 AAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFT 928
A IGVGISG EGMQAVM+SD AIAQFR+L LLLVHG W Y RI K++ YFFYKN+TF
Sbjct: 876 EADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISKMICYFFYKNITFG 935
Query: 929 LTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEG 988
T F + T FS Y+DW+ SLY+V FTS+PVI LG+F++DVSA K+P LYQEG
Sbjct: 936 FTLFLYEAYTSFSATPAYNDWYLSLYSVFFTSLPVICLGIFDQDVSAPFCLKFPVLYQEG 995
Query: 989 IKNVFFTWRVVAIWAFFSVYQSLVLYN-CVTTSSATGQNSSGKIFGIWDVSTMAFTCVVV 1047
++N+ F+WR + W F +++++ C T+ + N GK G + +TCVV
Sbjct: 996 VQNLLFSWRRILSWMFHGFCSAIIIFFLCKTSLESQAFNHEGKTAGRDILGGTMYTCVVW 1055
Query: 1048 TVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGI 1085
V+L++++ + T ++ V GS++ W+LF+ +Y +
Sbjct: 1056 VVSLQMVLTISYFTLIQHVVVWGSVVIWYLFLMVYGSL 1093
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/1102 (46%), Positives = 707/1102 (64%), Gaps = 72/1102 (6%)
Query: 36 QP-QAPNF-RTIYCNDREANQ--PLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFL 91
QP Q P F RT++CN ++ PLR++ N ++TT+YN++TF PK L+EQF R AN YFL
Sbjct: 32 QPIQGPGFSRTVFCNQPHMHKKKPLRYRSNYVSTTRYNLITFFPKSLYEQFHRAANLYFL 91
Query: 92 MISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQG--- 148
+ +ILS P+SP N + + PL V+ +S++KEA EDW+RF D+ IN+ V +
Sbjct: 92 VAAILSVFPLSPFNKWSMIAPLVFVVGLSMLKEALEDWRRFMQDVKINARKTCVHKSDGV 151
Query: 149 --QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRK 206
QR W+K+ VGDIV V++D FFPADLL L+S+ DG+CY+ET NLDGETNLK+++
Sbjct: 152 FRQR----KWKKVSVGDIVKVEKDEFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKR 207
Query: 207 ALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRN 266
+LE + E F ++CE PN +LYTF GNL ++QT PL+P+QILLR LRN
Sbjct: 208 SLEVSLPLDDDESFKNFMATIRCEDPNPNLYTFVGNLEFERQTFPLDPSQILLRDSKLRN 267
Query: 267 TEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAI- 325
T Y+ G V+F G +TKVM NS PSKRS +ER +D +I L L ++ I + G A
Sbjct: 268 TTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIERTMDYIIYTLLVLLILISCISSSGFAWE 327
Query: 326 --FIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETI 383
F K +YL G + D NP V+++ T + LY +IPISLYVSIE +
Sbjct: 328 TEFHMPKMWYL---RPGEPI--DFTNPINPIYAGVVHLITALLLYGYLIPISLYVSIEVV 382
Query: 384 KFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCS 443
K +Q++ +IN+DLHMY ES PA+ARTSNLNEELGQV I SDKTGTLT N M+F KCS
Sbjct: 383 KVWQAS-FINQDLHMYDDESGVPANARTSNLNEELGQVHTILSDKTGTLTCNQMDFLKCS 441
Query: 444 IGGEIYGTGITEIERGVAQQTGMKI---------PEVERSVKAVHE-------------- 480
I G YG +E+E A+Q + + P+ + V +
Sbjct: 442 IAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQTKVYGTWDSSRTQEIEVEGDNN 501
Query: 481 --------KGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQA 532
KGF F+D RL+ G W E P+ +FFR LAICHT +PE +E + TY+A
Sbjct: 502 YNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRILAICHTAIPELNEETGKYTYEA 561
Query: 533 ASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQ 592
SPDEA+ + AA+ FGF F++RT + +++RE G++ + Y++LN+LEF S RKR
Sbjct: 562 ESPDEASFLAAAREFGFEFFKRTQSSVFIRE-RFSGSGQIIEREYKVLNLLEFTSKRKRM 620
Query: 593 SVVCRYADGRLVLYCKGADSVIYERLA-NGNEDLKKVTREHLEQFGSSGLRTLCLAYRDL 651
+V+ R +G+++L CKGADS+I+ERLA NG L TR HL ++G +GLRTL LAYR L
Sbjct: 621 TVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPTTR-HLTEYGEAGLRTLALAYRKL 679
Query: 652 SPDMYERWNEKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIET 710
D Y WN +F++AK+S+ DR++ L+ A++IEK+L LIG TA+EDKLQ+GVP CI+
Sbjct: 680 DEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKELILIGATAVEDKLQKGVPQCIDK 739
Query: 711 LARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARF 770
LA+AG+K+WVLTGDKMETAINI +AC+L+ M+Q ITS + G + R
Sbjct: 740 LAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICITS-------MNSEGGSQDSKRV 792
Query: 771 MREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVV 830
++E + +L K + + + ALIIDGK L YAL+ ++ L L+++C+SV+
Sbjct: 793 VKENILNQLTKAVQMVK--LEKDPHAAFALIIDGKTLTYALEDDMKYQFLALAVDCASVI 850
Query: 831 CCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDF 890
CCRVSP QKA V LVK+G K TL+IGDGANDV MIQ A IGVGISG EGMQAVMASDF
Sbjct: 851 CCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDF 910
Query: 891 AIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWF 950
+IAQFRFL LL+VHG W Y RI +++ YFFYKN+ F LT F+F TGFSGQ Y+D++
Sbjct: 911 SIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYNDYY 970
Query: 951 QSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQS 1010
L+NV+ TS+PVI LG+FE+DVS+ + ++P LYQ+G KN+FF W + W VY S
Sbjct: 971 LLLFNVVLTSLPVIALGVFEQDVSSEICLQFPALYQQGTKNLFFDWSRILGWMCNGVYAS 1030
Query: 1011 LVLYNC---VTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYIT 1067
LV++ + S A N G+ + V T FTC++ N+++ + + T ++
Sbjct: 1031 LVIFFLNIGIIYSQAFRDN--GQTADMDAVGTTMFTCIIWAANVQIALTMSHFTWIQHVL 1088
Query: 1068 VGGSILAWFLFVFLYTGIMTPN 1089
+ GSI W+LFV +Y+ +M P+
Sbjct: 1089 IWGSIGMWYLFVAIYS-MMPPS 1109
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/1109 (46%), Positives = 708/1109 (63%), Gaps = 86/1109 (7%)
Query: 39 APNF-RTIYCNDREAN--QPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISI 95
P + R ++CN + + LR+ N ++TT+YN++TFLPK L+EQF RVAN YFL+ +I
Sbjct: 36 GPGYTRIVHCNQPHLHLAKVLRYTSNYVSTTRYNLITFLPKCLYEQFHRVANFYFLVAAI 95
Query: 96 LSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQ-RWVSI 154
LS P+SP N + + PL V+ +S+ KEA EDW+RF D+ +NS V +G +
Sbjct: 96 LSVFPLSPFNKWSMIAPLIFVVGLSMGKEALEDWRRFMQDVKVNSRKATVHRGDGDFGRR 155
Query: 155 PWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDY 214
W+KL+VGD+V V++D FFPADLL L+S+ DG+CY+ET NLDGETNLK+++ L+ T
Sbjct: 156 KWKKLRVGDVVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRCLDVTLPL 215
Query: 215 LTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAV 274
+ F G ++CE PN +LYTF GNL Q PL+P+QILLR LRNT Y+ G V
Sbjct: 216 ERDDTFQSFSGTIKCEDPNPNLYTFVGNLEYDGQVYPLDPSQILLRDSKLRNTSYVYGVV 275
Query: 275 IFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYL 334
+F GH+TKVM NS PSKRS +E+++D +I LFA L ++ I ++G A+ + K H
Sbjct: 276 VFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFALLVLVSFISSLGFAV-MTKMH--- 331
Query: 335 GLHNMGN--SVEDDQ----FNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQS 388
MG+ + D+ NP F +V+++ T + LY +IPISLYVSIE +K Q+
Sbjct: 332 ----MGDWWYLRPDKPERLTNPRNPFHAWVVHLITAVLLYGYLIPISLYVSIELVKVLQA 387
Query: 389 TQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEI 448
T +IN+DL MY +ES TPA ARTSNLNEELGQV+ I SDKTGTLT N M+F KCSI G
Sbjct: 388 T-FINQDLQMYDSESGTPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTS 446
Query: 449 YGTGITEIERGVAQQTGM------------------------KIP-------EVERSVKA 477
YG +E+E A+Q + K+P E+E + A
Sbjct: 447 YGVRASEVELAAAKQMAIDLDEEQGEEVTHLPRTRGRMHGYAKMPSKTSSDIELETVITA 506
Query: 478 VHE---------KGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERI 528
E KGF+F+D RL+ G W NE N D F R LA+CHT +PE DE +
Sbjct: 507 TDEGDQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDILMFLRILAVCHTAIPEVDEDTGKC 566
Query: 529 TYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNST 588
TY+A SPDE A + AA FGF F +RT + +++ E H G+ + Y++LNVL+F S
Sbjct: 567 TYEAESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH---SGQPVEREYKVLNVLDFTSK 623
Query: 589 RKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAY 648
RKR SV+ R G+++L CKGADS+I+ERL+ ++ + T +HL +G +GLRTL L+Y
Sbjct: 624 RKRMSVIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEATSKHLNGYGEAGLRTLALSY 683
Query: 649 RDLSPDMYERWNEKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPAC 707
R L Y WN +F +AK+S+ DR++ L++V++++EK+L L+G TA+EDKLQ+GVP C
Sbjct: 684 RKLDETEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQC 743
Query: 708 IETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEI 767
I+ LA+AG+KIWVLTGDKMETAINI YAC+L+ MKQ I A+R+ E E
Sbjct: 744 IDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIYI-----ALRNEEGSSQDPEA 798
Query: 768 ARFMREEVKRELNKCIDEAQQY-IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNC 826
A RE + L + I+ +Q + ALIIDGK L YAL+ ++ L L+++C
Sbjct: 799 A--ARENI---LMQIINASQMIKLEKDPHAAFALIIDGKTLTYALEDDIKYQFLALAVDC 853
Query: 827 SSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVM 886
+SV+CCRVSP QKA VT L K+G K TL+IGDGANDV MIQ A IGVGISG EGMQAVM
Sbjct: 854 ASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVM 913
Query: 887 ASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFY 946
ASDF+IAQFRFL LL+VHG W Y RI +++ YFFYKN+TF LT F+F TGFSGQ Y
Sbjct: 914 ASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFEAFTGFSGQAIY 973
Query: 947 DDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFS 1006
+D + L+NVI TS+PVI LG+FE+DVS+ + ++P LYQ+G KN+FF W + W
Sbjct: 974 NDSYLLLFNVILTSLPVIALGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRIIGWMANG 1033
Query: 1007 VYQSLVLYNC------VTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTI 1060
VY S+V+++ V + + GQ + G T FTC++ VN+++ + +
Sbjct: 1034 VYASVVIFSLNIGIFHVQSFCSGGQTADMDAMG-----TAMFTCIIWAVNVQIALTMSHF 1088
Query: 1061 TRFHYITVGGSILAWFLFVFLYTGIMTPN 1089
T ++ + GSI+ W++F+ L+ G++ P
Sbjct: 1089 TWIQHVLIWGSIVTWYIFLALF-GMLPPK 1116
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/1066 (46%), Positives = 689/1066 (64%), Gaps = 29/1066 (2%)
Query: 43 RTIYCNDREANQPLR--FKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP 100
R ++CND + + L+ ++GN ++TTKY F+PK LFEQFRRVAN YFL+++ +S +P
Sbjct: 38 RVVFCNDPDNPEALQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSP 97
Query: 101 MSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVL-QGQRWVSIPWRKL 159
++P + + PL +V+ +++KE ED +R + D+ N+ VEVL + +V W+ L
Sbjct: 98 LAPYTAPSVLAPLLIVIGATMVKEGVEDLRRRKQDVEANNRKVEVLGKTGTFVETKWKNL 157
Query: 160 QVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEK 219
+VGD+V V +D +FPADLL L+S+ DG+CY+ET NLDGETNLK++ ALE T D E
Sbjct: 158 RVGDLVKVHKDEYFPADLLLLSSSYEDGICYVETMNLDGETNLKLKHALEITSD---EES 214
Query: 220 ASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGH 279
F+G ++CE PN LY+F G L + + PL+P QILLR L+NT+Y+ G V+F GH
Sbjct: 215 IKNFRGMIKCEDPNEHLYSFVGTLYFEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGH 274
Query: 280 ETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNM 339
+TKVM N+ + PSKRS +E+K+D++I LF+ L V+ ++ I + G
Sbjct: 275 DTKVMQNATDPPSKRSKIEKKMDQIIYILFSILIVIAFTGSVFFGIATRRDMSDNGKLRR 334
Query: 340 GNSVEDDQ---FNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDL 396
D ++P + + T + LY +IPISLYVSIE +K QS +IN+D
Sbjct: 335 WYLRPDHTTVFYDPRRAVAAAFFHFLTALMLYGYLIPISLYVSIEVVKVLQSI-FINQDQ 393
Query: 397 HMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEI 456
MYH E++ PA ARTSNLNEELGQV+ I SDKTGTLT N MEF KCSI G YG G+TE+
Sbjct: 394 EMYHEETDRPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEV 453
Query: 457 ERGVAQQTGMKIPEVE--------RSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFF 508
E + +Q G+ E + KAV KGFNF D R++ G W N+ N + ++FF
Sbjct: 454 EVALRKQKGLMTQEEVGDNESLSIKEQKAV--KGFNFWDERIVDGQWINQPNAELIQKFF 511
Query: 509 RCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEK 568
R LAICHT +P+ + ITY+A SPDEAA V A++ GF F+ R+ T I + E ++
Sbjct: 512 RVLAICHTAIPDVNSDTGEITYEAESPDEAAFVIASRELGFEFFSRSQTSISLHE--IDH 569
Query: 569 M-GKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKK 627
M G+ D YE+L+VLEF+S+RKR SV+ R + RL+L KGADSV+++RLA ++
Sbjct: 570 MTGEKVDRVYELLHVLEFSSSRKRMSVIVRNPENRLLLLSKGADSVMFKRLAKHGRQNER 629
Query: 628 VTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSL-RDREQKLDEVAELIEK 686
T+EH++++ +GLRTL + YR++ D Y W E+F+ AK+ + DR+ +D A+ IEK
Sbjct: 630 ETKEHIKKYAEAGLRTLVITYREIDEDEYIVWEEEFLNAKTLVTEDRDALIDAAADKIEK 689
Query: 687 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQF 746
DL L+G TA+EDKLQ+GVP CIE L++AG+KIWVLTGDK ETAINI YAC+L+ MKQ
Sbjct: 690 DLILLGSTAVEDKLQKGVPDCIEKLSQAGVKIWVLTGDKTETAINIGYACSLLREGMKQI 749
Query: 747 IITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEK---LALIID 803
++T +++ I +E++GD +A+ + +K++L + + + + + E L+ID
Sbjct: 750 LVTLDSSDIEALEKQGDKEAVAKASFQSIKKQLREGMSQTAAVTDNSAKENSEMFGLVID 809
Query: 804 GKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGAND 863
GK L YALD L L L++ C+SV+CCR SP QKA VT LVK G + TL+IGDGAND
Sbjct: 810 GKSLTYALDSKLEKEFLELAIRCNSVICCRSSPKQKALVTRLVKNGTGRTTLAIGDGAND 869
Query: 864 VSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYK 923
V M+Q A IGVGISG EGMQAVMASDFAIAQFRFL LLLVHG W Y RI ++ YFFYK
Sbjct: 870 VGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRITLMICYFFYK 929
Query: 924 NLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQ 983
NL F T FW+ FSG+ Y+DW+ S YNV FTS+PVI LG+F++DVSA L KYP
Sbjct: 930 NLAFGFTLFWYEAYASFSGKPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPL 989
Query: 984 LYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQ-NSSGKIFGIWDVSTMAF 1042
LYQEG++NV F+W + W V S++++ + AT G++ + +
Sbjct: 990 LYQEGVQNVLFSWERILGWMLNGVISSMIIFFLTINTMATQAFRKDGQVVDYSVLGVTMY 1049
Query: 1043 TCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTP 1088
+ VV TVN ++ + N T + + GSI W+LF+ +Y G + P
Sbjct: 1050 SSVVWTVNCQMAISINYFTWIQHCFIWGSIGVWYLFLVIY-GSLPP 1094
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SLK6|ALA6_ARATH Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/1095 (46%), Positives = 686/1095 (62%), Gaps = 78/1095 (7%)
Query: 43 RTIYCNDRE---ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTT 99
R ++CN A + +R++ N ++TT+YN+LTFLPK L+EQF RVAN YFL+ +ILS
Sbjct: 41 RIVHCNQPHLHLATKLIRYRSNYVSTTRYNLLTFLPKCLYEQFHRVANFYFLVAAILSVF 100
Query: 100 PMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQ-RWVSIPWRK 158
P+SP N + + PL V+ +S+ KEA EDW+RF D+ +NS V +G + W++
Sbjct: 101 PLSPFNKWSMIAPLVFVVGLSMGKEALEDWRRFMQDVEVNSRKASVHKGSGDFGRRTWKR 160
Query: 159 LQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPE 218
++VGDIV V++D FFPADLL L+S+ DG+CY+ET NLDGETNLK+++ L+ T E
Sbjct: 161 IRVGDIVRVEKDEFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRCLDATLALEKDE 220
Query: 219 KASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAG 278
F G ++CE PN +LYTF GNL Q PL+PNQILLR LRNT Y+ G V+F G
Sbjct: 221 SFQNFSGTIKCEDPNPNLYTFVGNLECDGQVYPLDPNQILLRDSKLRNTAYVYGVVVFTG 280
Query: 279 HETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAI---FIDKKHYYLG 335
H+TKVM NS PSKRS +E+++D +I LFA L + I ++G A+ + + +YL
Sbjct: 281 HDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFALLLTVSFISSLGFAVMTKLLMAEWWYLR 340
Query: 336 LHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKD 395
+ NP +V+++ T + LY +IPISLYVSIE +K Q+ +IN+D
Sbjct: 341 PDK-----PESLTNPTNPLYAWVVHLITALLLYGYLIPISLYVSIEVVKVLQA-HFINQD 394
Query: 396 LHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITE 455
L +Y +ES TPA ARTSNLNEELGQV+ I SDKTGTLT N M+F KCSI G YG +E
Sbjct: 395 LQLYDSESGTPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYGVRASE 454
Query: 456 IERGVAQQTGMKIPE------------------------------VERSVKAVHEK---- 481
+E A+Q M + E +E V A EK
Sbjct: 455 VELAAAKQMAMDLEEKGEEVANLSMNKGRTQRYAKLASKTSSDFELETVVTASDEKDQKQ 514
Query: 482 -----GFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPD 536
GF+F+D RL+ W NE N D FFR LA+CHT +PE DE TY+A SPD
Sbjct: 515 NTGVKGFSFEDNRLMNENWLNEPNSDDILMFFRILAVCHTAIPEVDEDTGMCTYEAESPD 574
Query: 537 EAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVC 596
E A + A++ FGF F +RT + +++ E G+ D Y+ILN+L+F S RKR S +
Sbjct: 575 EVAFLVASREFGFEFTKRTQSSVFIAE-RFSSSGQPVDREYKILNLLDFTSKRKRMSAIV 633
Query: 597 RYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMY 656
R +G+++L CKGADS+I+ERL+ ++ T +HL +G +GLRTL L YR L Y
Sbjct: 634 RDEEGQILLLCKGADSIIFERLSKSGKEYLGATSKHLNVYGEAGLRTLALGYRKLDETEY 693
Query: 657 ERWNEKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAG 715
WN +F +AK+S+ DR++ L++V++++EK+L L+G TA+EDKLQ+GVP CI+ LA+AG
Sbjct: 694 AAWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAG 753
Query: 716 IKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEV 775
+KIWVLTGDKMETAINI YAC+L+ MKQ I+ + +VEE E A
Sbjct: 754 LKIWVLTGDKMETAINIGYACSLLRQGMKQISIS-----LTNVEESSQNSEAA------A 802
Query: 776 KRELNKCIDEAQQYI--HSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR 833
K + I A Q I ALIIDGK L YAL ++ L L+++C+SV+CCR
Sbjct: 803 KESILMQITNASQMIKIEKDPHAAFALIIDGKTLTYALKDDVKYQFLALAVDCASVICCR 862
Query: 834 VSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIA 893
VSP QKA VT L K+G K TL+IGDGANDV MIQ A IGVGISG EGMQAVMASDF+IA
Sbjct: 863 VSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIA 922
Query: 894 QFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSL 953
QFRFL LL+VHG W Y RI +++ YFFYKN+TF LT F+F TGFSGQ Y+D + L
Sbjct: 923 QFRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFECFTGFSGQSIYNDSYLLL 982
Query: 954 YNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVL 1013
+NV+ TS+PVI LG+FE+DV + + ++P LYQ+G KN+FF W + W VY S+V+
Sbjct: 983 FNVVLTSLPVISLGVFEQDVPSDVCLQFPALYQQGPKNLFFDWYRILGWMGNGVYASIVI 1042
Query: 1014 YNC------VTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYIT 1067
+ V + + GQ + G T FTC++ VN+++ + + T ++
Sbjct: 1043 FTLNLGIFHVQSFRSDGQTADMNAMG-----TAMFTCIIWAVNVQIALTMSHFTWIQHVM 1097
Query: 1068 VGGSILAWFLFVFLY 1082
+ GSI AW++F+ LY
Sbjct: 1098 IWGSIGAWYVFLALY 1112
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1097 | ||||||
| 449434855 | 1227 | PREDICTED: phospholipid-transporting ATP | 0.991 | 0.886 | 0.828 | 0.0 | |
| 356570066 | 1227 | PREDICTED: phospholipid-transporting ATP | 0.987 | 0.882 | 0.817 | 0.0 | |
| 255558304 | 1219 | Phospholipid-transporting ATPase, putati | 0.978 | 0.880 | 0.836 | 0.0 | |
| 356524099 | 1227 | PREDICTED: phospholipid-transporting ATP | 0.990 | 0.885 | 0.812 | 0.0 | |
| 224107853 | 1199 | aminophospholipid ATPase [Populus tricho | 0.966 | 0.884 | 0.844 | 0.0 | |
| 15218927 | 1213 | phospholipid-transporting ATPase 3 [Arab | 0.971 | 0.878 | 0.794 | 0.0 | |
| 5080816 | 1123 | Putative ATPase [Arabidopsis thaliana] | 0.971 | 0.949 | 0.794 | 0.0 | |
| 297840577 | 1215 | hypothetical protein ARALYDRAFT_475328 [ | 0.971 | 0.877 | 0.794 | 0.0 | |
| 359495585 | 1183 | PREDICTED: phospholipid-transporting ATP | 0.953 | 0.884 | 0.803 | 0.0 | |
| 357516581 | 1212 | Phospholipid-transporting ATPase [Medica | 0.937 | 0.848 | 0.831 | 0.0 |
| >gi|449434855|ref|XP_004135211.1| PREDICTED: phospholipid-transporting ATPase 3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1880 bits (4869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 906/1094 (82%), Positives = 1003/1094 (91%), Gaps = 6/1094 (0%)
Query: 1 MRGWDRVRASRSRLGQPP-SSRHRRTPSRT-VTLGRVQPQAPNFRTIYCNDREANQPLRF 58
M GWDRVR S SR G+ S+ + RT S T V LGRVQPQAP RTI+CNDR+AN ++F
Sbjct: 1 MSGWDRVRPSSSRFGRGNYSAMNERTASTTTVRLGRVQPQAPGHRTIFCNDRDANLLVKF 60
Query: 59 KGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLL 118
KGNS++TTKYN TF PKGLFEQFRRVAN YFL ISILSTTP+SPV+P+TNVVPLSLVLL
Sbjct: 61 KGNSVSTTKYNFFTFFPKGLFEQFRRVANLYFLTISILSTTPISPVHPITNVVPLSLVLL 120
Query: 119 VSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLL 178
VSLIKEA+EDWKRFQNDM IN+ V+VLQ Q+W S+PW++LQVGDIV V+QDGFFPADLL
Sbjct: 121 VSLIKEAFEDWKRFQNDMAINNNLVDVLQDQKWESVPWKRLQVGDIVRVRQDGFFPADLL 180
Query: 179 FLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYT 238
FLASTN DGVCYIETANLDGETNLKIRKALE+TWDYLTPEKASEFKGEVQCEQPNNSLYT
Sbjct: 181 FLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYT 240
Query: 239 FTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLE 298
FTGN+I+QKQTLPL+PNQ+LLRGCSLRNTEYI+GAVIF GHETKVMMN+MN+PSKRSTLE
Sbjct: 241 FTGNVIIQKQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLE 300
Query: 299 RKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFV 358
+KLDKLIL LFATL VMCLI AIGS +F+++++YYL L G ++QFNP RFLV +
Sbjct: 301 KKLDKLILTLFATLFVMCLIGAIGSGVFVNEEYYYLALDKGG----ENQFNPRNRFLVII 356
Query: 359 LNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEEL 418
L MFTLITLYS IIPISLYVSIE IKF QSTQYINKDL+M+HA+SNTPA ARTSNLNEEL
Sbjct: 357 LTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMFHADSNTPALARTSNLNEEL 416
Query: 419 GQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAV 478
GQVEYIFSDKTGTLTRNLMEFFKCSIGGE+YGTGITEIERG+A+Q G+K+ E +S AV
Sbjct: 417 GQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIERGIAEQNGLKVEEAHKSANAV 476
Query: 479 HEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEA 538
EKGFNFDDPRL+RGAWRNE N D CKEFFRCLAICHTVLPEGDESPE+ITYQAASPDEA
Sbjct: 477 QEKGFNFDDPRLMRGAWRNEPNSDLCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEA 536
Query: 539 ALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRY 598
ALV AAKNFGFFFYRRTPT IYVRESHVEKMGK+QDV YEILNVLEFNS RKRQSVVCRY
Sbjct: 537 ALVAAAKNFGFFFYRRTPTTIYVRESHVEKMGKIQDVSYEILNVLEFNSVRKRQSVVCRY 596
Query: 599 ADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYER 658
+DGRL+LYCKGAD+V+YERLA GN+DLK +TREHLE+FGSSGLRTLCLAYRDL PD+YE
Sbjct: 597 SDGRLILYCKGADTVVYERLAGGNDDLKNITREHLEKFGSSGLRTLCLAYRDLHPDVYES 656
Query: 659 WNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKI 718
WNEKFIQAKSSLRDRE+KLDEVAELIEKDL LIGCTAIEDKLQEGVP CI+TL+RAGIKI
Sbjct: 657 WNEKFIQAKSSLRDREKKLDEVAELIEKDLILIGCTAIEDKLQEGVPNCIQTLSRAGIKI 716
Query: 719 WVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778
WVLTGDKMETAINIAYACNLINNEMKQFII+SET+ IR+VE RGD VE+ARF+REEVK+E
Sbjct: 717 WVLTGDKMETAINIAYACNLINNEMKQFIISSETDEIREVENRGDQVELARFIREEVKKE 776
Query: 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQ 838
L +C++EAQ +HSI KLAL+IDGKCLMYALDPSLRV LL LSLNCSSVVCCRVSPLQ
Sbjct: 777 LKRCLEEAQLCLHSIPPPKLALVIDGKCLMYALDPSLRVTLLKLSLNCSSVVCCRVSPLQ 836
Query: 839 KAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFL 898
KAQVTSLVKKGA+KITLSIGDGANDVSMIQAAH+G+GISGQEGMQAVMASDFAIAQFRFL
Sbjct: 837 KAQVTSLVKKGAQKITLSIGDGANDVSMIQAAHVGIGISGQEGMQAVMASDFAIAQFRFL 896
Query: 899 TDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIF 958
TDLLLVHGRWSYLRICKVV YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIF
Sbjct: 897 TDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIF 956
Query: 959 TSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT 1018
T++PVI++GLF+KDVSA+LSKKYP+LY+EGI+NVFF WRVV WAFFSVYQSLV Y VT
Sbjct: 957 TALPVIIVGLFDKDVSAALSKKYPELYREGIRNVFFKWRVVTTWAFFSVYQSLVFYYFVT 1016
Query: 1019 TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLF 1078
SS++ Q+SSGK+FG+WD+STM FTC+VVTVNLRLLM+CN+ITR+HYITVGGSILAWFLF
Sbjct: 1017 ASSSSSQSSSGKVFGLWDISTMTFTCIVVTVNLRLLMICNSITRWHYITVGGSILAWFLF 1076
Query: 1079 VFLYTGIMTPNDRQ 1092
+FLY+GIMTP+DRQ
Sbjct: 1077 IFLYSGIMTPHDRQ 1090
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356570066|ref|XP_003553212.1| PREDICTED: phospholipid-transporting ATPase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1867 bits (4837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 898/1099 (81%), Positives = 1005/1099 (91%), Gaps = 16/1099 (1%)
Query: 1 MRGWDRVRASRSR-----LGQPPSSRHRRTPSRTVTLGRVQPQAPNFRTIYCNDREANQP 55
M+GWD +++S S LGQ + ++ PSRTV LGRVQPQAP RTI+CNDREAN P
Sbjct: 1 MKGWDGIQSSFSSRSSSTLGQ----QQQQPPSRTVRLGRVQPQAPTHRTIFCNDREANLP 56
Query: 56 LRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSL 115
+RFKGNSI+TTKYN TFLPKGLFEQFRRVAN YFLMISILSTTP+SPV+P+TNV+PLSL
Sbjct: 57 IRFKGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLMISILSTTPISPVSPITNVLPLSL 116
Query: 116 VLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPA 175
VLLVSLIKEA+EDWKRFQNDM++N+ ++VLQ Q+W SIPW+KLQVGD+V VKQD FFPA
Sbjct: 117 VLLVSLIKEAFEDWKRFQNDMSVNNNTIDVLQDQKWGSIPWKKLQVGDLVKVKQDAFFPA 176
Query: 176 DLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNS 235
DLLFLASTNADGVCYIETANLDGETNLKIRKALE+TWDY+TPEKASEFKGE+QCEQPNNS
Sbjct: 177 DLLFLASTNADGVCYIETANLDGETNLKIRKALEKTWDYVTPEKASEFKGEIQCEQPNNS 236
Query: 236 LYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRS 295
LYTFTGNLI QKQTLPL+PNQILLRGCSLRNTEYI+G VIF GHETKVMMN+MN+PSKRS
Sbjct: 237 LYTFTGNLITQKQTLPLSPNQILLRGCSLRNTEYIVGVVIFTGHETKVMMNTMNVPSKRS 296
Query: 296 TLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDD--QFNPDKR 353
TLERKLDKLIL LFATL VMC I A+GSAIF++KK++YL L +S E+ QFNP R
Sbjct: 297 TLERKLDKLILTLFATLFVMCFIGAVGSAIFVNKKYFYLHL----DSSEEGSAQFNPKNR 352
Query: 354 FLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSN 413
FLVF+L MFTLITLYS IIPISLYVSIE IKF QSTQ+INKDL MYH E+NTPA ARTSN
Sbjct: 353 FLVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLCMYHNETNTPALARTSN 412
Query: 414 LNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVER 473
LNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGE+YG G+TEIERG+A++ GMKI E R
Sbjct: 413 LNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIERGLAERNGMKIEE-NR 471
Query: 474 SVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAA 533
S AVHE+GFNFDD R++RGAWRNE NPD CKEFFRCLAICHTVLPEGDESPE+I YQAA
Sbjct: 472 SPNAVHERGFNFDDARIMRGAWRNEPNPDVCKEFFRCLAICHTVLPEGDESPEKIRYQAA 531
Query: 534 SPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQS 593
SPDEAALV AAK+FGFFFYRRTPTMIYVRESHVEKMGK+QDV YEILNVLEFNSTRKRQS
Sbjct: 532 SPDEAALVIAAKHFGFFFYRRTPTMIYVRESHVEKMGKVQDVSYEILNVLEFNSTRKRQS 591
Query: 594 VVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSP 653
VVCRY DGRLVLYCKGAD+V+YERLA+GN ++KKVTREHLEQFGS+GLRTLCLAY++L P
Sbjct: 592 VVCRYPDGRLVLYCKGADNVVYERLADGNNNIKKVTREHLEQFGSAGLRTLCLAYKELHP 651
Query: 654 DMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLAR 713
D+YE WNEKFIQAKSSL DRE+KLDEVAELIE DL LIG TAIEDKLQEGVPACIETL R
Sbjct: 652 DVYESWNEKFIQAKSSLNDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQR 711
Query: 714 AGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMRE 773
AGIKIWVLTGDK+ETAINIAYACNLINNEMKQF+I+SET+AIR+VE+RGD VEIARF+ E
Sbjct: 712 AGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQVEIARFIIE 771
Query: 774 EVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR 833
EVKREL KC++EAQ S+SG KLAL+IDGKCLMYALDPSLRV+LLNLSLNC +VVCCR
Sbjct: 772 EVKRELKKCLEEAQSSFQSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCR 831
Query: 834 VSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIA 893
VSPLQKAQVTS+VKKGA+KITLSIGDGANDVSMIQAAH+GVGISG EGMQAVMASDFAIA
Sbjct: 832 VSPLQKAQVTSMVKKGAQKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIA 891
Query: 894 QFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSL 953
QFR+L DLLLVHGRWSYLRICKVV+YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSL
Sbjct: 892 QFRYLADLLLVHGRWSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSL 951
Query: 954 YNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVL 1013
YNVIFT++PVI++GLF+KDVS+SLSKKYP+LY EGI+NVFF W+VVAIWAFFSVYQSL+
Sbjct: 952 YNVIFTALPVIIVGLFDKDVSSSLSKKYPELYMEGIRNVFFKWKVVAIWAFFSVYQSLIF 1011
Query: 1014 YNCVTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSIL 1073
+ V+T++ + +NS+GK+FG+WDVSTMAFTCVV+TVNLRLLM+CN+ITR+HYI+VGGSIL
Sbjct: 1012 FYFVSTTNLSAKNSAGKVFGLWDVSTMAFTCVVITVNLRLLMICNSITRWHYISVGGSIL 1071
Query: 1074 AWFLFVFLYTGIMTPNDRQ 1092
AWF+F+F+Y+GI TP DRQ
Sbjct: 1072 AWFIFIFIYSGISTPYDRQ 1090
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255558304|ref|XP_002520179.1| Phospholipid-transporting ATPase, putative [Ricinus communis] gi|223540671|gb|EEF42234.1| Phospholipid-transporting ATPase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1860 bits (4819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 904/1081 (83%), Positives = 994/1081 (91%), Gaps = 8/1081 (0%)
Query: 3 GWDRVRASRSRLGQPPSSRHRRTPSRTVTLGRVQPQAPNFRTIYCNDREANQPLRFKGNS 62
GW+RVR+SRSRLG+ SS T SRTV LGRVQPQAP RTIYCNDR+AN P+RFKGNS
Sbjct: 7 GWERVRSSRSRLGRDASS----TSSRTVRLGRVQPQAPGHRTIYCNDRDANFPVRFKGNS 62
Query: 63 IATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLI 122
I+TTKYN LTFLPKGLFEQFRRVANCYFL+ISILS TP+SPVNPVTNVVPLSLVLLVSLI
Sbjct: 63 ISTTKYNFLTFLPKGLFEQFRRVANCYFLLISILSMTPISPVNPVTNVVPLSLVLLVSLI 122
Query: 123 KEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLAS 182
KEA+EDWKRFQNDM IN++PVEVLQ Q+W +IPW+KLQVGDI+ VKQDGFFPADLLFLA+
Sbjct: 123 KEAFEDWKRFQNDMVINNSPVEVLQDQKWETIPWKKLQVGDIIKVKQDGFFPADLLFLAA 182
Query: 183 TNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGN 242
TN DGVCYIETANLDGETNLKIRKALERTWDYLTPEKA+EFKGEVQCEQPNNSLYTFTGN
Sbjct: 183 TNPDGVCYIETANLDGETNLKIRKALERTWDYLTPEKAAEFKGEVQCEQPNNSLYTFTGN 242
Query: 243 LIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLD 302
LI+QKQTLPL+PNQ+LLRGCSLRNTE+I+GAVIF GHETKVMMNSMN+PSKRSTLERKLD
Sbjct: 243 LIIQKQTLPLSPNQLLLRGCSLRNTEFIVGAVIFTGHETKVMMNSMNVPSKRSTLERKLD 302
Query: 303 KLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMF 362
KLIL LF +L +MCLI AI S IFI+ K+YYLGL + +FNP RF V L +F
Sbjct: 303 KLILTLFGSLFIMCLIGAIASGIFINHKYYYLGLDEGAPT----EFNPSNRFGVAALTLF 358
Query: 363 TLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVE 422
TLITLYS IIPISLYVSIE IKF Q TQ+INKDLHMYHAE+NT A ARTSNLNEELGQVE
Sbjct: 359 TLITLYSTIIPISLYVSIEMIKFIQCTQFINKDLHMYHAETNTAALARTSNLNEELGQVE 418
Query: 423 YIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKG 482
YIFSDKTGTLTRNLMEFFKCSIGGE+YGTGITEIERG AQ GMK+ EV + V A+HEKG
Sbjct: 419 YIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIERGGAQWNGMKVQEVHKPVGAIHEKG 478
Query: 483 FNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVT 542
FNFDD RL+RGAWRNE N D CKEFFRCLAICHTVLPEGDESPE+ITYQAASPDEAALVT
Sbjct: 479 FNFDDSRLMRGAWRNEPNADTCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVT 538
Query: 543 AAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGR 602
AAKNFGFFFYRRTPTMIYVRESH EKMGK+QDV YEILNVLEFNSTRKRQSVVCRY DGR
Sbjct: 539 AAKNFGFFFYRRTPTMIYVRESHAEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGR 598
Query: 603 LVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEK 662
LVLYCKGAD+VI+ERLA+GN+ LKK+TREHLEQFG +GLRTLCLAYRDLSP++YE WNEK
Sbjct: 599 LVLYCKGADTVIFERLADGNDGLKKITREHLEQFGCAGLRTLCLAYRDLSPELYESWNEK 658
Query: 663 FIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLT 722
FIQAKSSLRDRE+KLDEVAELIEK+L LIG TAIEDKLQEGVP CIETL+RAGIKIWVLT
Sbjct: 659 FIQAKSSLRDREKKLDEVAELIEKELILIGSTAIEDKLQEGVPGCIETLSRAGIKIWVLT 718
Query: 723 GDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKC 782
GDKMETAINIAYACNLINNEMKQFII+SET+AIR+VE +GD VEIARF++EEVK+EL KC
Sbjct: 719 GDKMETAINIAYACNLINNEMKQFIISSETDAIREVENKGDQVEIARFIKEEVKKELKKC 778
Query: 783 IDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQV 842
++EAQ ++++SG KLAL+IDGKCLMYALDP+LR +LLNLSLNCSSVVCCRVSPLQKAQV
Sbjct: 779 LEEAQHSLNTVSGPKLALVIDGKCLMYALDPTLRAMLLNLSLNCSSVVCCRVSPLQKAQV 838
Query: 843 TSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLL 902
TSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISG EGMQAVMASDFAIAQF +L DLL
Sbjct: 839 TSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGLEGMQAVMASDFAIAQFCYLADLL 898
Query: 903 LVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMP 962
LVHGRWSYLRICKV+ YFFYKNLTFTLTQFWFTF TGFSGQRFYDDWFQSLYNVIFT++P
Sbjct: 899 LVHGRWSYLRICKVITYFFYKNLTFTLTQFWFTFHTGFSGQRFYDDWFQSLYNVIFTALP 958
Query: 963 VIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSA 1022
VI++GLF+KDVSASLSKKYP+LY+EGI+N FF WRVV WA FSVYQSL+ Y+ VTTSSA
Sbjct: 959 VIIVGLFDKDVSASLSKKYPELYKEGIRNAFFKWRVVVTWACFSVYQSLIFYHFVTTSSA 1018
Query: 1023 TGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLY 1082
+G+NSSG++FG+WDVSTMAFTCVVVTVNLRLLM+CN+ITR+HYI+VGGSILAWF F+F+Y
Sbjct: 1019 SGKNSSGRMFGLWDVSTMAFTCVVVTVNLRLLMICNSITRWHYISVGGSILAWFTFIFVY 1078
Query: 1083 T 1083
+
Sbjct: 1079 S 1079
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356524099|ref|XP_003530670.1| PREDICTED: phospholipid-transporting ATPase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1857 bits (4811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 890/1095 (81%), Positives = 999/1095 (91%), Gaps = 8/1095 (0%)
Query: 1 MRGWDRVRASRSRLGQPPSSRHRR-TPSRTVTLGRVQPQAPNFRTIYCNDREANQPLRFK 59
M+GWD +++S S +H++ +PS+TV LGRVQPQAP RTI+CNDREAN P+RFK
Sbjct: 1 MKGWDGIQSSFSSRSSSTLGQHQQQSPSQTVRLGRVQPQAPTHRTIFCNDREANIPIRFK 60
Query: 60 GNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLV 119
GNSI+TTKYN TFLPKGLFEQFRRVAN YFL ISILSTTP+SPV+P+TNV+PLSLVLLV
Sbjct: 61 GNSISTTKYNFFTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSLVLLV 120
Query: 120 SLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLF 179
SLIKEA+EDWKRFQNDM+IN+ ++VL Q+W S+PW+KLQVGDIV VKQD FFPADLLF
Sbjct: 121 SLIKEAFEDWKRFQNDMSINNNTIDVLHDQKWESVPWKKLQVGDIVKVKQDAFFPADLLF 180
Query: 180 LASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTF 239
LASTNADGVCYIETANLDGETNLKIRKALE+TWDY+TPEKASEFKGE++CEQPNNSLYTF
Sbjct: 181 LASTNADGVCYIETANLDGETNLKIRKALEKTWDYVTPEKASEFKGEIECEQPNNSLYTF 240
Query: 240 TGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLER 299
TGNLI QKQTLPL+PNQILLRGCSLRNTEYI+G VIF G ETKVMMN+MN+PSKRSTLER
Sbjct: 241 TGNLITQKQTLPLSPNQILLRGCSLRNTEYIVGVVIFTGQETKVMMNTMNVPSKRSTLER 300
Query: 300 KLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDD--QFNPDKRFLVF 357
KLDKLIL LFATL VMC I A+GSAIF++KK++YL L +S E+ QFNP RFLVF
Sbjct: 301 KLDKLILTLFATLFVMCFIGAVGSAIFVNKKYFYLHL----DSSEEGSAQFNPKNRFLVF 356
Query: 358 VLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEE 417
+L MFTLITLYS IIPISLYVSIE IKF QSTQ+INKDL MYH E+NTPA ARTSNLNEE
Sbjct: 357 LLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLCMYHNETNTPALARTSNLNEE 416
Query: 418 LGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKA 477
LGQVEYIFSDKTGTLTRNLMEFFKCSIGGE+YG G+TEIERG+A++ GMKI E RS A
Sbjct: 417 LGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIERGLAERNGMKIEE-NRSPNA 475
Query: 478 VHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDE 537
VHE+GFNFDD R++RGAWRNE NPD CKEFFRCLAICHTVLPEGDESPE+I YQAASPDE
Sbjct: 476 VHERGFNFDDARIMRGAWRNEPNPDVCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDE 535
Query: 538 AALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCR 597
AALV AAK+FGFFFYRRTPTM+YVRESHVEKMGK+QDV YEILNVLEFNSTRKRQSVVCR
Sbjct: 536 AALVIAAKHFGFFFYRRTPTMVYVRESHVEKMGKVQDVSYEILNVLEFNSTRKRQSVVCR 595
Query: 598 YADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYE 657
Y DGRLVLYCKGAD+V+YERLA+GN ++KKVTREHLEQFGS+GLRTLCLAY++L PD+YE
Sbjct: 596 YPDGRLVLYCKGADNVVYERLADGNNNIKKVTREHLEQFGSAGLRTLCLAYKELHPDVYE 655
Query: 658 RWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIK 717
WNEKFIQAKSSL DRE+KLDEVAELIE DL LIG TAIEDKLQEGVPACIETL RAGIK
Sbjct: 656 SWNEKFIQAKSSLNDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIK 715
Query: 718 IWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777
IWVLTGDK+ETAINIAYACNLINNEMKQF+I+SET+ IR+VE+RGD VEIARF++E VKR
Sbjct: 716 IWVLTGDKIETAINIAYACNLINNEMKQFVISSETDEIREVEDRGDQVEIARFIKEVVKR 775
Query: 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPL 837
EL KC++EAQ S+ G KLAL+IDGKCLMYALDPSLRV+LLNLSLNC +VVCCRVSPL
Sbjct: 776 ELKKCLEEAQSSFQSLRGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPL 835
Query: 838 QKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 897
QKAQVTS+VKKGA+KITLSIGDGANDVSMIQAAH+GVGISG EGMQAVMASDFAIAQFR+
Sbjct: 836 QKAQVTSMVKKGAQKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRY 895
Query: 898 LTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVI 957
L DLLLVHGRWSYLRICKVV+YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVI
Sbjct: 896 LADLLLVHGRWSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVI 955
Query: 958 FTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCV 1017
FT++PVI++GLF+KDVS+SLSKKYPQLY EGI+NVFF W+VVAIWAFFSVYQSL+ + V
Sbjct: 956 FTALPVIIVGLFDKDVSSSLSKKYPQLYMEGIRNVFFKWKVVAIWAFFSVYQSLIFFYFV 1015
Query: 1018 TTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFL 1077
++++ + +NS+GKIFG+WDVSTMAFTCVV+TVNLRLLM+CN+ITR+HYI+VGGSILAWFL
Sbjct: 1016 SSTNLSAKNSAGKIFGLWDVSTMAFTCVVITVNLRLLMICNSITRWHYISVGGSILAWFL 1075
Query: 1078 FVFLYTGIMTPNDRQ 1092
F+F+Y+GI TP DRQ
Sbjct: 1076 FIFIYSGISTPYDRQ 1090
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224107853|ref|XP_002314626.1| aminophospholipid ATPase [Populus trichocarpa] gi|222863666|gb|EEF00797.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1857 bits (4809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 899/1065 (84%), Positives = 988/1065 (92%), Gaps = 5/1065 (0%)
Query: 19 SSRHRRTPSRTVTLGRVQPQAPNFRTIYCNDREANQPLRFKGNSIATTKYNVLTFLPKGL 78
SS H PSRTVTLGRVQPQAP RTIYCNDR+AN P+RFKGNSI+TTKYN TF+PKGL
Sbjct: 1 SSFHTPAPSRTVTLGRVQPQAPGHRTIYCNDRDANLPVRFKGNSISTTKYNFFTFVPKGL 60
Query: 79 FEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTI 138
FEQFRRVANCYFL+ISILS TP+SPVNPVTNVVPLSLVLLVSLIKEA+EDWKRFQNDM I
Sbjct: 61 FEQFRRVANCYFLLISILSMTPISPVNPVTNVVPLSLVLLVSLIKEAFEDWKRFQNDMVI 120
Query: 139 NSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDG 198
N++ ++VLQ +WV++PW+KLQVGDIV VK+DGFFPADLLFLASTNADGVCY ETANLDG
Sbjct: 121 NNSLIDVLQDDKWVAVPWKKLQVGDIVRVKKDGFFPADLLFLASTNADGVCYTETANLDG 180
Query: 199 ETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQIL 258
ETNLKIRKALERTWDYLTP+KA+EFKGE+QCEQPNNSLYTFTGNLI QKQTLPL PNQIL
Sbjct: 181 ETNLKIRKALERTWDYLTPDKAAEFKGEMQCEQPNNSLYTFTGNLIFQKQTLPLTPNQIL 240
Query: 259 LRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLI 318
LRGCSLRNTEYI+GAVIF GHETKVMMNSMN+PSKRSTLERKLDKLILALFATL +MCLI
Sbjct: 241 LRGCSLRNTEYIVGAVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILALFATLFIMCLI 300
Query: 319 CAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYV 378
AIGS IFI++K+YYL L + +FNP RF V L +FTLITLYS IIPISLYV
Sbjct: 301 GAIGSGIFINRKYYYLRL----DKAVAAEFNPGNRF-VAALTLFTLITLYSTIIPISLYV 355
Query: 379 SIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 438
SIE IKF QSTQ+INKDLHMYHAE+NTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME
Sbjct: 356 SIEMIKFIQSTQFINKDLHMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 415
Query: 439 FFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNE 498
FFKCSIGGE+YG+G+TEIE G AQ+TG+K EV +S A+ EKGFNFDD RL+RGAWRNE
Sbjct: 416 FFKCSIGGEVYGSGVTEIELGGAQRTGIKFQEVRKSSTAIQEKGFNFDDHRLMRGAWRNE 475
Query: 499 HNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTM 558
N D CKEFFRCLAICHTVLPEGDESPE+ITYQAASPDEAALVTAAKNFGFFFYRRTPTM
Sbjct: 476 PNSDTCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTM 535
Query: 559 IYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERL 618
I+VRESHVEKMGK+QDV YEILNVLEFNSTRKRQSVVCRY +GRLVLYCKGAD+VIYERL
Sbjct: 536 IHVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRYPNGRLVLYCKGADTVIYERL 595
Query: 619 ANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLD 678
A GN+DLKKVTR HLEQFGS+GLRTLCLAYRDLSP+ YE WNEKFIQAKSSLRDRE+KLD
Sbjct: 596 AAGNDDLKKVTRAHLEQFGSAGLRTLCLAYRDLSPETYESWNEKFIQAKSSLRDREKKLD 655
Query: 679 EVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738
EVAEL+EKDL LIG TAIEDKLQEGVPACIETL+RAGIK+WVLTGDKMETAINIAYACNL
Sbjct: 656 EVAELVEKDLILIGSTAIEDKLQEGVPACIETLSRAGIKVWVLTGDKMETAINIAYACNL 715
Query: 739 INNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKL 798
INN+MKQFII+SET+AIR+VE RGD VEIARF++EEVK+EL KC++EAQ Y+ ++SG KL
Sbjct: 716 INNDMKQFIISSETDAIREVENRGDQVEIARFIKEEVKKELKKCLEEAQHYLRTVSGPKL 775
Query: 799 ALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858
AL+IDGKCLMYALDP+LRV+LLNLSLNC SVVCCRVSPLQKAQVTSLVKKGARKITLSIG
Sbjct: 776 ALVIDGKCLMYALDPTLRVMLLNLSLNCHSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 835
Query: 859 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVL 918
DGANDVSMIQAAHIG+GISG EGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKV+
Sbjct: 836 DGANDVSMIQAAHIGIGISGLEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVIT 895
Query: 919 YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLS 978
YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFT++PVI++GLF+KDVSASLS
Sbjct: 896 YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLS 955
Query: 979 KKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSGKIFGIWDVS 1038
KKYP+LY+EGI+NVFF WRVV WA FSVYQSLV Y+ VT SSA+G+NSSGKIFG+WD+S
Sbjct: 956 KKYPELYKEGIRNVFFKWRVVITWACFSVYQSLVFYHFVTISSASGKNSSGKIFGLWDIS 1015
Query: 1039 TMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYT 1083
TMAFTCVV+TVNLRLLM+CN+ITR+HYI+VGGSILAWF+F+F+Y+
Sbjct: 1016 TMAFTCVVITVNLRLLMICNSITRWHYISVGGSILAWFMFIFIYS 1060
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15218927|ref|NP_176191.1| phospholipid-transporting ATPase 3 [Arabidopsis thaliana] gi|30316321|sp|Q9XIE6.2|ALA3_ARATH RecName: Full=Phospholipid-transporting ATPase 3; Short=AtALA3; AltName: Full=Aminophospholipid ATPase 3; AltName: Full=Aminophospholipid flippase 3; AltName: Full=Protein IRREGULAR TRICHOME BRANCH 2 gi|20147219|gb|AAM10325.1| At1g59820/F23H11_14 [Arabidopsis thaliana] gi|332195500|gb|AEE33621.1| phospholipid-transporting ATPase 3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1838 bits (4762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 853/1073 (79%), Positives = 975/1073 (90%), Gaps = 7/1073 (0%)
Query: 19 SSRHRRTPSRTVTLGRVQPQAPNFRTIYCNDREANQPLRFKGNSIATTKYNVLTFLPKGL 78
S+ H+RTPSRTVTLG +QPQAP +RT+YCNDRE+NQP+RFKGNSI+TTKYNV TFLPKGL
Sbjct: 12 SATHQRTPSRTVTLGHIQPQAPTYRTVYCNDRESNQPVRFKGNSISTTKYNVFTFLPKGL 71
Query: 79 FEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTI 138
FEQFRR+AN YFL IS LS TP+SPV+P+TNV PLS+VLLVSLIKEA+EDWKRFQNDM+I
Sbjct: 72 FEQFRRIANIYFLGISCLSMTPISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSI 131
Query: 139 NSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDG 198
N++ VE+LQ Q+WVSIPWRKLQVGDIV +K+DGFFPAD+LF++STN+DG+CY+ETANLDG
Sbjct: 132 NNSTVEILQDQQWVSIPWRKLQVGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDG 191
Query: 199 ETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQIL 258
ETNLKIRKALERTWDYL PEKA EFKGE+QCEQPNNSLYTFTGNL++QKQTLPL+P+Q+L
Sbjct: 192 ETNLKIRKALERTWDYLVPEKAYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLL 251
Query: 259 LRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLI 318
LRGCSLRNTEYI+GAV+F GHETKVMMN+MN PSKRSTLE+KLDKLI+ +F L MCLI
Sbjct: 252 LRGCSLRNTEYIVGAVVFTGHETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLI 311
Query: 319 CAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYV 378
AIG +I D++ YLGLHN + ++ FTL+TL+S IIPISLYV
Sbjct: 312 GAIGCSIVTDREDKYLGLHN-------SDWEYRNGLMIGFFTFFTLVTLFSSIIPISLYV 364
Query: 379 SIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 438
SIE IKF QSTQ+IN+DL+MYHAE+NTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME
Sbjct: 365 SIEMIKFIQSTQFINRDLNMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 424
Query: 439 FFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNE 498
FFKCSIGG YG G+TEIE+G+AQ+ G+K+ E +RS A+ EKGFNFDDPRL+RGAWRNE
Sbjct: 425 FFKCSIGGVSYGCGVTEIEKGIAQRHGLKVQEEQRSTGAIREKGFNFDDPRLMRGAWRNE 484
Query: 499 HNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTM 558
NPD CKE FRCLAICHTVLPEGDESPE+I YQAASPDEAALVTAAKNFGFFFYRRTPTM
Sbjct: 485 PNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTM 544
Query: 559 IYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERL 618
+YVRESHVEKMGK+QDV YEILNVLEFNSTRKRQSVVCR+ DGRLVLYCKGAD+VI+ERL
Sbjct: 545 VYVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERL 604
Query: 619 ANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLD 678
ANG +D++KVTREHLE FGSSGLRTLCLAY+DL+P+ Y+ WNEKFIQAKS+LRDRE+KLD
Sbjct: 605 ANGMDDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALRDREKKLD 664
Query: 679 EVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738
EVAELIEKDL LIG TAIEDKLQEGVP CIETL+RAGIKIWVLTGDKMETAINIAYACNL
Sbjct: 665 EVAELIEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNL 724
Query: 739 INNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKL 798
INNEMKQF+I+SET+AIR+ EERGD VEIAR ++EEVKREL K ++EAQ +H+++G KL
Sbjct: 725 INNEMKQFVISSETDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGPKL 784
Query: 799 ALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858
+L+IDGKCLMYALDPSLRV+LL+LSLNC+SVVCCRVSPLQKAQVTSLV+KGA+KITLSIG
Sbjct: 785 SLVIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIG 844
Query: 859 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVL 918
DGANDVSMIQAAH+G+GISG EGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVV+
Sbjct: 845 DGANDVSMIQAAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVM 904
Query: 919 YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLS 978
YFFYKNLTFTLTQFWFTF+TGFSGQRFYDDWFQSL+NV+FT++PVI+LGLFEKDVSASLS
Sbjct: 905 YFFYKNLTFTLTQFWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLS 964
Query: 979 KKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSGKIFGIWDVS 1038
K+YP+LY+EGI+N FF WRVVA+WA +VYQSLV Y VTTSS NSSGK+FG+WDVS
Sbjct: 965 KRYPELYREGIRNSFFKWRVVAVWATSAVYQSLVCYLFVTTSSFGAVNSSGKVFGLWDVS 1024
Query: 1039 TMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDR 1091
TM FTC+V+ VN+R+L+M N+ITR+HYITVGGSILAW +F F+Y GIMTP+DR
Sbjct: 1025 TMVFTCLVIAVNVRILLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPHDR 1077
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|5080816|gb|AAD39325.1|AC007258_14 Putative ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1838 bits (4762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 853/1073 (79%), Positives = 975/1073 (90%), Gaps = 7/1073 (0%)
Query: 19 SSRHRRTPSRTVTLGRVQPQAPNFRTIYCNDREANQPLRFKGNSIATTKYNVLTFLPKGL 78
S+ H+RTPSRTVTLG +QPQAP +RT+YCNDRE+NQP+RFKGNSI+TTKYNV TFLPKGL
Sbjct: 12 SATHQRTPSRTVTLGHIQPQAPTYRTVYCNDRESNQPVRFKGNSISTTKYNVFTFLPKGL 71
Query: 79 FEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTI 138
FEQFRR+AN YFL IS LS TP+SPV+P+TNV PLS+VLLVSLIKEA+EDWKRFQNDM+I
Sbjct: 72 FEQFRRIANIYFLGISCLSMTPISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSI 131
Query: 139 NSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDG 198
N++ VE+LQ Q+WVSIPWRKLQVGDIV +K+DGFFPAD+LF++STN+DG+CY+ETANLDG
Sbjct: 132 NNSTVEILQDQQWVSIPWRKLQVGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDG 191
Query: 199 ETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQIL 258
ETNLKIRKALERTWDYL PEKA EFKGE+QCEQPNNSLYTFTGNL++QKQTLPL+P+Q+L
Sbjct: 192 ETNLKIRKALERTWDYLVPEKAYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLL 251
Query: 259 LRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLI 318
LRGCSLRNTEYI+GAV+F GHETKVMMN+MN PSKRSTLE+KLDKLI+ +F L MCLI
Sbjct: 252 LRGCSLRNTEYIVGAVVFTGHETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLI 311
Query: 319 CAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYV 378
AIG +I D++ YLGLHN + ++ FTL+TL+S IIPISLYV
Sbjct: 312 GAIGCSIVTDREDKYLGLHN-------SDWEYRNGLMIGFFTFFTLVTLFSSIIPISLYV 364
Query: 379 SIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 438
SIE IKF QSTQ+IN+DL+MYHAE+NTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME
Sbjct: 365 SIEMIKFIQSTQFINRDLNMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 424
Query: 439 FFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNE 498
FFKCSIGG YG G+TEIE+G+AQ+ G+K+ E +RS A+ EKGFNFDDPRL+RGAWRNE
Sbjct: 425 FFKCSIGGVSYGCGVTEIEKGIAQRHGLKVQEEQRSTGAIREKGFNFDDPRLMRGAWRNE 484
Query: 499 HNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTM 558
NPD CKE FRCLAICHTVLPEGDESPE+I YQAASPDEAALVTAAKNFGFFFYRRTPTM
Sbjct: 485 PNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTM 544
Query: 559 IYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERL 618
+YVRESHVEKMGK+QDV YEILNVLEFNSTRKRQSVVCR+ DGRLVLYCKGAD+VI+ERL
Sbjct: 545 VYVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERL 604
Query: 619 ANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLD 678
ANG +D++KVTREHLE FGSSGLRTLCLAY+DL+P+ Y+ WNEKFIQAKS+LRDRE+KLD
Sbjct: 605 ANGMDDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALRDREKKLD 664
Query: 679 EVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738
EVAELIEKDL LIG TAIEDKLQEGVP CIETL+RAGIKIWVLTGDKMETAINIAYACNL
Sbjct: 665 EVAELIEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNL 724
Query: 739 INNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKL 798
INNEMKQF+I+SET+AIR+ EERGD VEIAR ++EEVKREL K ++EAQ +H+++G KL
Sbjct: 725 INNEMKQFVISSETDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGPKL 784
Query: 799 ALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858
+L+IDGKCLMYALDPSLRV+LL+LSLNC+SVVCCRVSPLQKAQVTSLV+KGA+KITLSIG
Sbjct: 785 SLVIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIG 844
Query: 859 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVL 918
DGANDVSMIQAAH+G+GISG EGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVV+
Sbjct: 845 DGANDVSMIQAAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVM 904
Query: 919 YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLS 978
YFFYKNLTFTLTQFWFTF+TGFSGQRFYDDWFQSL+NV+FT++PVI+LGLFEKDVSASLS
Sbjct: 905 YFFYKNLTFTLTQFWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLS 964
Query: 979 KKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSGKIFGIWDVS 1038
K+YP+LY+EGI+N FF WRVVA+WA +VYQSLV Y VTTSS NSSGK+FG+WDVS
Sbjct: 965 KRYPELYREGIRNSFFKWRVVAVWATSAVYQSLVCYLFVTTSSFGAVNSSGKVFGLWDVS 1024
Query: 1039 TMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDR 1091
TM FTC+V+ VN+R+L+M N+ITR+HYITVGGSILAW +F F+Y GIMTP+DR
Sbjct: 1025 TMVFTCLVIAVNVRILLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPHDR 1077
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297840577|ref|XP_002888170.1| hypothetical protein ARALYDRAFT_475328 [Arabidopsis lyrata subsp. lyrata] gi|297334011|gb|EFH64429.1| hypothetical protein ARALYDRAFT_475328 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1829 bits (4738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 854/1075 (79%), Positives = 972/1075 (90%), Gaps = 9/1075 (0%)
Query: 19 SSRHRRTPSRTVTLGRVQPQAPNFRTIYCNDREANQPLRFK--GNSIATTKYNVLTFLPK 76
S+ HRRTPSRTVTLG +QPQAP +RT+YCNDRE+NQP+RFK NSI+TTKYNV TFLPK
Sbjct: 12 SATHRRTPSRTVTLGHIQPQAPTYRTVYCNDRESNQPVRFKVHRNSISTTKYNVFTFLPK 71
Query: 77 GLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDM 136
GLFEQFRR+AN YFL IS LS TP+SPV+P+TNV PLS+VLLVSLIKEA+EDWKRFQNDM
Sbjct: 72 GLFEQFRRIANIYFLGISCLSMTPISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDM 131
Query: 137 TINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANL 196
+IN++ VE+LQ Q+WVSIPWRKLQVGDIV +K+DGFFPAD+LFL+STNADG+CY+ETANL
Sbjct: 132 SINNSTVEILQDQQWVSIPWRKLQVGDIVKIKKDGFFPADILFLSSTNADGICYVETANL 191
Query: 197 DGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQ 256
DGETNLKIRKALERTWDYL PEKA EFKGE+QCEQPNNSLYTFTGNL++QKQTLPL+P+Q
Sbjct: 192 DGETNLKIRKALERTWDYLVPEKAYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQ 251
Query: 257 ILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMC 316
+LLRGCSLRNTEYI+GAV+F GHETKVMMN+MN PSKRSTLE+KLDKLI+ +F L MC
Sbjct: 252 LLLRGCSLRNTEYIVGAVVFTGHETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMC 311
Query: 317 LICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISL 376
LI AIG +I D++ YLGLH + ++ FTL+TL+S IIPISL
Sbjct: 312 LIGAIGCSIVTDREDKYLGLHK-------SDWEYRNGLMIGFFTFFTLVTLFSSIIPISL 364
Query: 377 YVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNL 436
YVSIE IKF QSTQ+IN+DL MYHAE+NTPASARTSNLNEELGQVEYIFSDKTGTLTRNL
Sbjct: 365 YVSIEMIKFIQSTQFINRDLSMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNL 424
Query: 437 MEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWR 496
MEFFKCSIGG YG G+TEIERG+AQ+ G+K+ E +RS A+ EKGFNFDDPRL+RGAWR
Sbjct: 425 MEFFKCSIGGISYGCGVTEIERGIAQRHGLKVQEEQRSTGAIREKGFNFDDPRLMRGAWR 484
Query: 497 NEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTP 556
NE NPD CKE FRCLAICHTVLPEGDESPE+I YQAASPDEAALVTAAKNFGFFFYRRTP
Sbjct: 485 NEPNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTP 544
Query: 557 TMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYE 616
TM+YVRE+HVEKMGK+QDV YEILNVLEFNSTRKRQSVVCR+ DGRLVLYCKGAD+VI+E
Sbjct: 545 TMVYVREAHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFE 604
Query: 617 RLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQK 676
RLANG +D++KVTREHLE FGSSGLRTLCLAY+DL+P+ Y+ WNEKFIQAKS+LRDRE+K
Sbjct: 605 RLANGMDDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALRDREKK 664
Query: 677 LDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 736
LDEVAELIEKDL LIG TAIEDKLQEGVP CIETL+RAGIKIWVLTGDKMETAINIAYAC
Sbjct: 665 LDEVAELIEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYAC 724
Query: 737 NLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGE 796
NLINNEMKQF+I+SET+AIR+ EERGD VEIAR ++EEVKREL K ++EAQ +H+++G
Sbjct: 725 NLINNEMKQFVISSETDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGP 784
Query: 797 KLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLS 856
KL+L+IDGKCLMYALDPSLRV+LL+LSLNC+SVVCCRVSPLQKAQVTSLV+KGA+KITLS
Sbjct: 785 KLSLVIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLS 844
Query: 857 IGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKV 916
IGDGANDVSMIQAAH+G+GISG EGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKV
Sbjct: 845 IGDGANDVSMIQAAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKV 904
Query: 917 VLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSAS 976
V+YFFYKNLTFTLTQFWFTF+TGFSGQRFYDDWFQSL+NV+FT++PVI+LGLFEKDVSAS
Sbjct: 905 VMYFFYKNLTFTLTQFWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSAS 964
Query: 977 LSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSGKIFGIWD 1036
LSK+YP+LY+EGI+N FF WRVVA+WA +VYQSLV Y VTTSS NSSGK+FG+WD
Sbjct: 965 LSKRYPELYREGIRNSFFKWRVVAVWASSAVYQSLVCYLFVTTSSFGAVNSSGKVFGLWD 1024
Query: 1037 VSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDR 1091
VSTM FTC+V+ VN+R+L+M N+ITR+HYITVGGSILAW +F F+Y GIMTP+DR
Sbjct: 1025 VSTMVFTCLVIAVNVRILLMSNSITRWHYITVGGSILAWLVFAFIYCGIMTPHDR 1079
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359495585|ref|XP_002265337.2| PREDICTED: phospholipid-transporting ATPase 3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1806 bits (4678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 877/1092 (80%), Positives = 964/1092 (88%), Gaps = 46/1092 (4%)
Query: 1 MRGWDRVRASRSRLGQPPSSRHRRTPSRTVTLGRVQPQAPNFRTIYCNDREANQPLRFKG 60
M GWDRVR+SRSRLG S R SRTV LGRVQPQAP RTIYCNDR+AN P+R +G
Sbjct: 1 MNGWDRVRSSRSRLG---GSDSRAPSSRTVRLGRVQPQAPGHRTIYCNDRDANFPVRIQG 57
Query: 61 NSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVS 120
+ PV+P+TNVVPLSLVL VS
Sbjct: 58 SP---------------------------------------CPVHPITNVVPLSLVLFVS 78
Query: 121 LIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFL 180
L+KEA+EDWKR QND IN+ ++VLQ Q+W IPW+KLQVGDIV VKQDGFFPAD+LFL
Sbjct: 79 LVKEAFEDWKRLQNDKAINNALIDVLQDQKWERIPWKKLQVGDIVKVKQDGFFPADILFL 138
Query: 181 ASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFT 240
A TN DGVCYIETANLDGETNLKIRKALE+TWDYLTPEKASEFKGEVQCEQPNNSLYTFT
Sbjct: 139 AGTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFT 198
Query: 241 GNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLERK 300
GNLI+QKQTLPL+PNQILLRGCSLRNTEYI+GAVIF GHETKVMMN+MN+PSKRSTLERK
Sbjct: 199 GNLIIQKQTLPLSPNQILLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLERK 258
Query: 301 LDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLN 360
LDKLILALF L +MCLI AI S +FI++K+YYLGL G SVE+ QFNP RFLV L
Sbjct: 259 LDKLILALFGGLFLMCLIGAIASGVFINRKYYYLGL---GASVEN-QFNPSNRFLVATLT 314
Query: 361 MFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQ 420
MFTLITLYS IIPISLYVSIE IKF QSTQ+INKDLHMYH E+NTPA ARTSNLNEELGQ
Sbjct: 315 MFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLHMYHVETNTPALARTSNLNEELGQ 374
Query: 421 VEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHE 480
VEYIFSDKTGTLTRNLMEFFKCSIGGE+YGTGITEIE+G A++ G+K+ EV +S KAVHE
Sbjct: 375 VEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIEKGGAERRGIKLEEVHKSSKAVHE 434
Query: 481 KGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAAL 540
KGFNFDD RL+ GAWRNE +PDACKEFFRCLAICHTVLPEGDESPE++TYQAASPDEAAL
Sbjct: 435 KGFNFDDARLMLGAWRNEPDPDACKEFFRCLAICHTVLPEGDESPEKVTYQAASPDEAAL 494
Query: 541 VTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD 600
VTAAKNFGFFFYRRTPT IYVRESHVEKMGK+QDV YEILNVLEFNSTRKRQSVVCRY D
Sbjct: 495 VTAAKNFGFFFYRRTPTTIYVRESHVEKMGKVQDVSYEILNVLEFNSTRKRQSVVCRYPD 554
Query: 601 GRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWN 660
GRLVLYCKGADSVI+ERL +GN DLKK TREHLEQFGS+GLRTLCLAYRDLS DMYE WN
Sbjct: 555 GRLVLYCKGADSVIFERLGDGNGDLKKTTREHLEQFGSAGLRTLCLAYRDLSTDMYEHWN 614
Query: 661 EKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWV 720
EKFIQAKSSLRDRE+KLDEVAELIEKDL LIGCTAIEDKLQEGVP+CIETL+RAGIKIWV
Sbjct: 615 EKFIQAKSSLRDREKKLDEVAELIEKDLVLIGCTAIEDKLQEGVPSCIETLSRAGIKIWV 674
Query: 721 LTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELN 780
LTGDKMETAINIAYACNLINN+MKQFII+SET+AIR+VE RGD VEIARF++E V +L
Sbjct: 675 LTGDKMETAINIAYACNLINNDMKQFIISSETDAIREVENRGDQVEIARFIKESVTADLK 734
Query: 781 KCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKA 840
K ++EAQQ++H+ISG KLAL+IDGKCLMYALDP+LR +LLNLSLNC+SVVCCRVSPLQKA
Sbjct: 735 KFLEEAQQHLHTISGPKLALVIDGKCLMYALDPNLRGMLLNLSLNCTSVVCCRVSPLQKA 794
Query: 841 QVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTD 900
QVTSLVKKGARKITLSIGDGANDVSMIQAAH+GVGISG EGMQAVMASDFAIAQFRFLTD
Sbjct: 795 QVTSLVKKGARKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRFLTD 854
Query: 901 LLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTS 960
LLLVHGRWSYLRICKVV YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFT+
Sbjct: 855 LLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTA 914
Query: 961 MPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTS 1020
+PVI++GLF+KDVS SLSKKYP+LY+EGI++ FF WRVV IWAFFS YQSLV Y VT+S
Sbjct: 915 LPVIIVGLFDKDVSESLSKKYPELYKEGIRDSFFKWRVVGIWAFFSFYQSLVFYYFVTSS 974
Query: 1021 SATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVF 1080
S++GQNSSGK+FG+WDVSTMAFTCVVVTVNLRLLM+CN+ITR+HYI+V GSILAWF+F+F
Sbjct: 975 SSSGQNSSGKMFGLWDVSTMAFTCVVVTVNLRLLMLCNSITRWHYISVAGSILAWFIFIF 1034
Query: 1081 LYTGIMTPNDRQ 1092
+Y+G+MTP DRQ
Sbjct: 1035 IYSGVMTPYDRQ 1046
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357516581|ref|XP_003628579.1| Phospholipid-transporting ATPase [Medicago truncatula] gi|355522601|gb|AET03055.1| Phospholipid-transporting ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1796 bits (4651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 861/1036 (83%), Positives = 959/1036 (92%), Gaps = 8/1036 (0%)
Query: 60 GNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLV 119
GNSI+TTKYN TFLPKGLFEQFRRVAN YFL ISILSTTP+SPV+P+TNV+PLSLVLLV
Sbjct: 45 GNSISTTKYNFFTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSLVLLV 104
Query: 120 SLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLF 179
SLIKEA+EDWKRFQNDM+IN+ ++VLQ Q+WVSIPW+KLQVGDI+ VKQDGFFPADL+F
Sbjct: 105 SLIKEAFEDWKRFQNDMSINNNMIDVLQDQKWVSIPWKKLQVGDIIKVKQDGFFPADLIF 164
Query: 180 LASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTF 239
LASTN DGVCYIETANLDGETNLKIRKALE+TWDYLTPEKASEFKGE+QCEQPNNSLYTF
Sbjct: 165 LASTNVDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEIQCEQPNNSLYTF 224
Query: 240 TGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKRSTLER 299
TGNL++QKQTLPL+PNQILLRGCSLRNTEYI+G VIF G ETKVMMNSMN+PSKRSTLER
Sbjct: 225 TGNLLIQKQTLPLSPNQILLRGCSLRNTEYIVGVVIFTGQETKVMMNSMNVPSKRSTLER 284
Query: 300 KLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDD--QFNPDKRFLVF 357
KLDKLILALFATL +MC I AIGSAIF++KK++YL L +S E+ QFNP RFLVF
Sbjct: 285 KLDKLILALFATLFMMCFIGAIGSAIFVNKKYFYLHL----DSSEEGSAQFNPGNRFLVF 340
Query: 358 VLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEE 417
+L MFTLITLYS IIPISLYVSIE IKF QSTQ+INKDL MYH ESNTPA ARTSNLNEE
Sbjct: 341 ILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLGMYHKESNTPALARTSNLNEE 400
Query: 418 LGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKA 477
LGQVEYIFSDKTGTLTRNLMEFFKCSIG E+YG G+TEIERG+A++ GMKI E RS A
Sbjct: 401 LGQVEYIFSDKTGTLTRNLMEFFKCSIGAEVYGNGVTEIERGLAERNGMKIEE-NRSPNA 459
Query: 478 VHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDE-SPERITYQAASPD 536
V E+GFNF+D RL+RGAWRNE NPDACKEFFRCLAICHTVLPEGDE SPE+I YQAASPD
Sbjct: 460 VQERGFNFEDARLMRGAWRNEPNPDACKEFFRCLAICHTVLPEGDEKSPEKIKYQAASPD 519
Query: 537 EAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVC 596
EAALV AAK+FGFFFYRRTPTMIYVRESHVEKMGK+QD+ YEILNVLEFNSTRKRQSVVC
Sbjct: 520 EAALVIAAKHFGFFFYRRTPTMIYVRESHVEKMGKVQDIPYEILNVLEFNSTRKRQSVVC 579
Query: 597 RYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMY 656
RY DGRLVLYCKGAD+VIYERLA+ N D+KK+TRE+LEQFGSSGLRTLCLAYR+L P++Y
Sbjct: 580 RYPDGRLVLYCKGADTVIYERLADSNSDMKKITREYLEQFGSSGLRTLCLAYRELHPNVY 639
Query: 657 ERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGI 716
E WNEKFIQAKS+L DRE+KLDEVAELIE +L LIG TAIEDKLQEGVPACIETL RAGI
Sbjct: 640 ESWNEKFIQAKSTLHDREKKLDEVAELIENNLILIGSTAIEDKLQEGVPACIETLQRAGI 699
Query: 717 KIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVK 776
KIWVLTGDK+ETAINIAYACNLINNEMKQF+I+SET+AIR+VE+RGD VEIARF++EEVK
Sbjct: 700 KIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQVEIARFIKEEVK 759
Query: 777 RELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSP 836
R+L KC++EAQ Y H++SG KLAL+IDGKCLMYALDP+LRV+LLNLSLNC +VVCCRVSP
Sbjct: 760 RQLKKCLEEAQSYFHTVSGPKLALVIDGKCLMYALDPTLRVMLLNLSLNCHAVVCCRVSP 819
Query: 837 LQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896
LQKAQVTS+VKKGA+KITLSIGDGANDVSMIQAAH+GVGISG EGMQAVMASDFAIAQFR
Sbjct: 820 LQKAQVTSMVKKGAKKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFR 879
Query: 897 FLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNV 956
+L DLLLVHGRWSYLRICKVV+YFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNV
Sbjct: 880 YLEDLLLVHGRWSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNV 939
Query: 957 IFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNC 1016
IFT++PVIM+GLF+KDVSASLSKKYP+LY EGI+NVFF W+VVAIWAFFSVYQSL+ +
Sbjct: 940 IFTALPVIMVGLFDKDVSASLSKKYPELYMEGIRNVFFKWKVVAIWAFFSVYQSLIFFYF 999
Query: 1017 VTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWF 1076
V+T++ + +NS GK FG+WDVSTMAFTCVVVTVNLRLLM+CN+ITR+HYI+VGGSILAWF
Sbjct: 1000 VSTTNLSAKNSDGKTFGLWDVSTMAFTCVVVTVNLRLLMICNSITRWHYISVGGSILAWF 1059
Query: 1077 LFVFLYTGIMTPNDRQ 1092
+F+F+Y+GI TP DRQ
Sbjct: 1060 IFIFIYSGITTPYDRQ 1075
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1097 | ||||||
| TAIR|locus:2025961 | 1213 | ALA3 "aminophospholipid ATPase | 0.959 | 0.868 | 0.739 | 0.0 | |
| TAIR|locus:2102345 | 1202 | AT3G25610 [Arabidopsis thalian | 0.948 | 0.866 | 0.456 | 7.6e-238 | |
| TAIR|locus:2026900 | 1200 | AT1G68710 [Arabidopsis thalian | 0.945 | 0.864 | 0.451 | 2e-237 | |
| TAIR|locus:2031860 | 1203 | ACA.l "autoinhibited Ca2+/ATPa | 0.946 | 0.862 | 0.454 | 3.1e-234 | |
| TAIR|locus:2030180 | 1228 | AT1G72700 [Arabidopsis thalian | 0.542 | 0.484 | 0.457 | 6.5e-234 | |
| TAIR|locus:2007858 | 1216 | AT1G17500 [Arabidopsis thalian | 0.943 | 0.851 | 0.446 | 3.5e-233 | |
| TAIR|locus:2088217 | 1243 | AT3G13900 [Arabidopsis thalian | 0.541 | 0.477 | 0.450 | 3.6e-231 | |
| TAIR|locus:2020038 | 1240 | AT1G54280 [Arabidopsis thalian | 0.539 | 0.477 | 0.448 | 5.4e-228 | |
| UNIPROTKB|L7N093 | 1085 | LOC486036 "Uncharacterized pro | 0.319 | 0.322 | 0.472 | 3.8e-204 | |
| MGI|MGI:1354710 | 1148 | Atp8a2 "ATPase, aminophospholi | 0.356 | 0.340 | 0.446 | 1.3e-201 |
| TAIR|locus:2025961 ALA3 "aminophospholipid ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4164 (1470.9 bits), Expect = 0., P = 0.
Identities = 784/1060 (73%), Positives = 896/1060 (84%)
Query: 32 LGRVQPQAPNFRTIYCNDREANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFL 91
LG +QPQAP +RT+YCNDRE+NQP+RFKGNSI+TTKYNV TFLPKGLFEQFRR+AN YFL
Sbjct: 25 LGHIQPQAPTYRTVYCNDRESNQPVRFKGNSISTTKYNVFTFLPKGLFEQFRRIANIYFL 84
Query: 92 MISILXXXXXXXXXXXXXXXXXXXXXXXXXIKEAWEDWKRFQNDMTINSTPVEVLQGQRW 151
IS L IKEA+EDWKRFQNDM+IN++ VE+LQ Q+W
Sbjct: 85 GISCLSMTPISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSINNSTVEILQDQQW 144
Query: 152 VSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERT 211
VSIPWRKLQVGDIV +K+DGFFPAD+LF++STN+DG+CY+ETANLDGETNLKIRKALERT
Sbjct: 145 VSIPWRKLQVGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDGETNLKIRKALERT 204
Query: 212 WDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYII 271
WDYL PEKA EFKGE+QCEQPNNSLYTFTGNL++QKQTLPL+P+Q+LLRGCSLRNTEYI+
Sbjct: 205 WDYLVPEKAYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLLLRGCSLRNTEYIV 264
Query: 272 GAVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKH 331
GAV+F GHETKVMMN+MN PSKRSTLE+KLDKLI+ +F L MCLI AIG +I D++
Sbjct: 265 GAVVFTGHETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIGCSIVTDRED 324
Query: 332 YYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQY 391
YLGLHN D ++ ++ FTL+TL+S IIPISLYVSIE IKF QSTQ+
Sbjct: 325 KYLGLHN-----SDWEYR--NGLMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQF 377
Query: 392 INKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSXXXXXXXX 451
IN+DL+MYHAE+NTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCS
Sbjct: 378 INRDLNMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGC 437
Query: 452 XXXXXXRGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCL 511
+G+AQ+ G+K+ E +RS A+ EKGFNFDDPRL+RGAWRNE NPD CKE FRCL
Sbjct: 438 GVTEIEKGIAQRHGLKVQEEQRSTGAIREKGFNFDDPRLMRGAWRNEPNPDLCKELFRCL 497
Query: 512 AICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGK 571
AICHTVLPEGDESPE+I YQAASPDEAALVTAAKNFGFFFYRRTPTM+YVRESHVEKMGK
Sbjct: 498 AICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTMVYVRESHVEKMGK 557
Query: 572 MQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTRE 631
+QDV YEILNVLEFNSTRKRQSVVCR+ DGRLVLYCKGAD+VI+ERLANG +D++KVTRE
Sbjct: 558 IQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERLANGMDDVRKVTRE 617
Query: 632 HLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLI 691
HLE FGSSGLRTLCLAY+DL+P+ Y+ WNEKFIQAKS+LRDRE+KLDEVAELIEKDL LI
Sbjct: 618 HLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALRDREKKLDEVAELIEKDLILI 677
Query: 692 GCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSE 751
G TAIEDKLQEGVP CIETL+RAGIKIWVLTGDKMETAINIAYACNLINNEMKQF+I+SE
Sbjct: 678 GSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFVISSE 737
Query: 752 TNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYAL 811
T+AIR+ EERGD VEIAR ++EEVKREL K ++EAQ +H+++G KL+L+IDGKCLMYAL
Sbjct: 738 TDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGPKLSLVIDGKCLMYAL 797
Query: 812 DPSLRXXXXXXXXXXXXXXXXXXXPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAH 871
DPSLR PLQKAQVTSLV+KGA+KITLSIGDGANDVSMIQAAH
Sbjct: 798 DPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDGANDVSMIQAAH 857
Query: 872 IGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNXXXXXXX 931
+G+GISG EGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVV+YFFYKN
Sbjct: 858 VGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVMYFFYKNLTFTLTQ 917
Query: 932 XXXXXXXXXSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKN 991
SGQRFYDDWFQSL+NV+FT++PVI+LGLFEKDVSASLSK+YP+LY+EGI+N
Sbjct: 918 FWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLSKRYPELYREGIRN 977
Query: 992 VFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNL 1051
FF WRVVA+WA +VYQSLV Y VTTSS NSSGK+FG+WDVSTM FTC+V+ VN+
Sbjct: 978 SFFKWRVVAVWATSAVYQSLVCYLFVTTSSFGAVNSSGKVFGLWDVSTMVFTCLVIAVNV 1037
Query: 1052 RLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPNDR 1091
R+L+M N+ITR+HYITVGGSILAW +F F+Y GIMTP+DR
Sbjct: 1038 RILLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPHDR 1077
|
|
| TAIR|locus:2102345 AT3G25610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2293 (812.2 bits), Expect = 7.6e-238, P = 7.6e-238
Identities = 488/1069 (45%), Positives = 652/1069 (60%)
Query: 40 PNF-RTIYCND--REANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISIL 96
P F R +YCN+ A + + GN + +TKY V +F PK LFEQFRRVAN YFL+ IL
Sbjct: 36 PGFSRVVYCNEPGSPAAERRNYAGNYVRSTKYTVASFFPKSLFEQFRRVANFYFLVTGIL 95
Query: 97 XXXXXXXXXXXXXXXXXXXXXXXXXIKEAWEDWKRFQNDMTINSTPVEVLQGQR-WVSIP 155
+KE EDW+R Q D+ +N+ V+V G +
Sbjct: 96 SLTDLSPYGAVSALLPLALVISATMVKEGIEDWRRKQQDIEVNNRKVKVHDGNGIFRQEE 155
Query: 156 WRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYL 215
WR L+VGDIV V++D FFPADLL L+S+ D VCY+ET NLDGETNLK+++ LE T L
Sbjct: 156 WRNLRVGDIVRVEKDEFFPADLLLLSSSYEDSVCYVETMNLDGETNLKVKQGLEATSSLL 215
Query: 216 TPEKA-SEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAV 274
+ +F+G V+CE PN +LY F G L ++++ PL+ QILLR LRNTEY+ GAV
Sbjct: 216 NQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEERFPLSIQQILLRDSKLRNTEYVYGAV 275
Query: 275 IFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIF-IDKKHYY 333
+F GH+TKV+ NS + PSKRS +ER +DK+I +F + +M + GS IF ++ +
Sbjct: 276 VFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMFGLVFLMSFV---GSIIFGVETREDK 332
Query: 334 L--GLHNMGNSVEDDQ---FNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQS 388
+ G DD F+P++ + + + FT LYS IPISLYVSIE +K QS
Sbjct: 333 VKNGRTERWYLKPDDADIFFDPERAPMAAIYHFFTATMLYSYFIPISLYVSIEIVKVLQS 392
Query: 389 TQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSXXXXX 448
+IN+D+HMY+ E++ PA ARTSNLNEELG V+ I SDKTGTLT N MEF KCS
Sbjct: 393 I-FINRDIHMYYEETDKPAQARTSNLNEELGMVDTILSDKTGTLTCNSMEFIKCSIAGKA 451
Query: 449 XXXXXXXXXRGVAQQTGMKIPEVERSVKAVHE------KGFNFDDPRLLRGAWRNEHNPD 502
R +A ++G P V + V + KGFNF+D R++ G W +
Sbjct: 452 YGRGITEVERAMAVRSGGS-PLVNEDLDVVVDQSGPKVKGFNFEDERVMNGNWVRQPEAA 510
Query: 503 ACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVR 562
++FFR LA+CHT +PE DE ++Y+A SPDEAA V AA+ FGF F+ RT I R
Sbjct: 511 VLQKFFRLLAVCHTAIPETDEESGNVSYEAESPDEAAFVVAAREFGFEFFNRTQNGISFR 570
Query: 563 ESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGN 622
E + K++ V Y +LNVLEFNSTRKR SV+ R DG+L+L KGAD+V++ERLA
Sbjct: 571 ELDLVSGEKVERV-YRLLNVLEFNSTRKRMSVIVRDDDGKLLLLSKGADNVMFERLAKNG 629
Query: 623 EDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSL-RDREQKLDEVA 681
+ T+EH+ Q+ +GLRTL LAYR++ + Y +N+ F +AK+S+ DRE +DE+
Sbjct: 630 RQFEAKTQEHVNQYADAGLRTLVLAYREVDENEYIEFNKSFNEAKASVSEDREALIDEIT 689
Query: 682 ELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINN 741
+ +E+DL L+G TA+EDKLQ GVP CI+ LA+AGIKIWVLTGDKMETAINI +A +L+
Sbjct: 690 DKMERDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFASSLLRQ 749
Query: 742 EMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALI 801
EMKQ II ET I+ +E+ G EI RE V +L + +A S E ALI
Sbjct: 750 EMKQIIINLETPQIKSLEKSGGKDEIELASRESVVMQLQE--GKALLAASGASSEAFALI 807
Query: 802 IDGKCLMYALDPSLRXXXXXXXXXXXXXXXXXXXPLQKAQVTSLVKKGARKITLSIGDGA 861
IDGK L YAL+ ++ P QKA VT LVK G K TL+IGDGA
Sbjct: 808 IDGKSLTYALEDEIKKMFLDLATSCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGA 867
Query: 862 NDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFF 921
NDV M+Q A IGVGISG EGMQAVM+SD AIAQFR+L LLLVHG W Y RI ++ YFF
Sbjct: 868 NDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRIASMICYFF 927
Query: 922 YKNXXXXXXXXXXXXXXXXSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKY 981
YKN SGQ Y+DWF SL+NV F+S+PVI LG+F++DVSA K+
Sbjct: 928 YKNITFGVTVFLYEAYTSFSGQPAYNDWFLSLFNVFFSSLPVIALGVFDQDVSARFCYKF 987
Query: 982 PQLYQEGIKNVFFTWRVVAIWAFFSVYQSL-VLYNCVTTSSATGQNSSGKIFGIWDVSTM 1040
P LYQEG++N+ F+W+ + W F +L + + C + + GK G +
Sbjct: 988 PLLYQEGVQNILFSWKRIIGWMFNGFISALAIFFLCKESLKHQLFDPDGKTAGREILGGT 1047
Query: 1041 AFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1089
+TCVV VNL++ + + T +I + GSI W++F+ +Y G MTP+
Sbjct: 1048 MYTCVVWVVNLQMALSISYFTWVQHIVIWGSIAFWYIFLMIY-GAMTPS 1095
|
|
| TAIR|locus:2026900 AT1G68710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2289 (810.8 bits), Expect = 2.0e-237, P = 2.0e-237
Identities = 480/1063 (45%), Positives = 656/1063 (61%)
Query: 40 PNF-RTIYCNDREANQP--LRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISIL 96
P F R +YCN+ ++ + + N + TTKY + TFLPK LFEQFRRVAN YFL+ +L
Sbjct: 38 PGFSRVVYCNEPDSPEADSRNYSDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVTGVL 97
Query: 97 XXXXXXXXXXXXXXXXXXXXXXXXXIKEAWEDWKRFQNDMTINSTPVEVLQGQ-RWVSIP 155
+KE EDW+R + D +N+ V+V +G + +
Sbjct: 98 AFTPLAPYTASSAIVPLLFVIGATMVKEGVEDWRRQKQDNEVNNRKVKVHRGDGSFDAKE 157
Query: 156 WRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYL 215
W+ L +GDIV V+++ FFPADL+ L+S+ D +CY+ET NLDGETNLK+++ LE T
Sbjct: 158 WKTLSIGDIVKVEKNEFFPADLVLLSSSYEDAICYVETMNLDGETNLKVKQGLEVTSSLR 217
Query: 216 TPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVI 275
F+ V+CE PN +LY+F G + ++ PL+P Q+LLR LRNT++I GAVI
Sbjct: 218 DEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYPLSPQQLLLRDSKLRNTDFIFGAVI 277
Query: 276 FAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAI--GSAIFIDKKHYY 333
F GH+TKV+ NS + PSKRS +E+K+DK+I +F + M I ++ G D K
Sbjct: 278 FTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFMVITMAFIGSVIFGVTTRDDLKDGV 337
Query: 334 LGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYIN 393
+ + F+P + + + + T + LYS IPISLYVSIE +K QS +IN
Sbjct: 338 MKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYSYFIPISLYVSIEIVKVLQSI-FIN 396
Query: 394 KDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSXXXXXXXXXX 453
+D+HMY+ E++ PA ARTSNLNEELGQV+ I SDKTGTLT N MEF KCS
Sbjct: 397 QDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGV 456
Query: 454 XXXXRGVAQQTGMKIP--------EVERSVKAVHE----KGFNFDDPRLLRGAWRNEHNP 501
+ ++ G + ++E S +A+ E KGFNF D R++ G W E +
Sbjct: 457 TEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITEESTVKGFNFRDERIMNGNWVTETHA 516
Query: 502 DACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYV 561
D ++FFR LA+CHTV+PE DE E+I+Y+A SPDEAA V AA+ GF F+ RT T I V
Sbjct: 517 DVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEAAFVIAARELGFEFFNRTQTTISV 576
Query: 562 RESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANG 621
RE + GK + Y++LNVLEFNSTRKR SV+ + DG+L+L CKGAD+V++ERL+
Sbjct: 577 RELDLVS-GKRVERLYKVLNVLEFNSTRKRMSVIVQEEDGKLLLLCKGADNVMFERLSKN 635
Query: 622 NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLR-DREQKLDEV 680
+ ++ TR+H+ ++ +GLRTL LAYR+L Y+ +NE+ +AKSS+ DRE ++EV
Sbjct: 636 GREFEEETRDHVNEYADAGLRTLILAYRELDEKEYKVFNERISEAKSSVSADRESLIEEV 695
Query: 681 AELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740
E IEKDL L+G TA+EDKLQ GVP CI+ LA+AGIKIWVLTGDKMETAINI +AC+L+
Sbjct: 696 TEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 755
Query: 741 NEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLAL 800
+MKQ II ET I+ +E+ G+ IA+ +E V L++ I+ Q +S G AL
Sbjct: 756 QDMKQIIINLETPEIQSLEKTGEKDVIAKASKENV---LSQIINGKTQLKYS-GGNAFAL 811
Query: 801 IIDGKCLMYALDPSLRXXXXXXXXXXXXXXXXXXXPLQKAQVTSLVKKGARKITLSIGDG 860
IIDGK L YALD ++ P QKA VT LVK G K TL+IGDG
Sbjct: 812 IIDGKSLAYALDDDIKHIFLELAVSCASVICCRSSPKQKALVTRLVKSGNGKTTLAIGDG 871
Query: 861 ANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYF 920
ANDV M+Q A IGVGISG EGMQAVM+SD AIAQFR+L LLLVHG W Y RI ++ YF
Sbjct: 872 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISTMICYF 931
Query: 921 FYKNXXXXXXXXXXXXXXXXSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKK 980
FYKN S Y+DWF SLYNV F+S+PVI LG+F++DVSA K
Sbjct: 932 FYKNITFGFTLFLYETYTTFSSTPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLK 991
Query: 981 YPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYN-CVTTSSATGQNSSGKIFGIWDVST 1039
+P LYQEG++NV F+WR + W F Y +++++ C ++ + N GK G +
Sbjct: 992 FPLLYQEGVQNVLFSWRRILGWMFNGFYSAVIIFFLCKSSLQSQAFNHDGKTPGREILGG 1051
Query: 1040 MAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLY 1082
+TC+V VNL++ + + T +I + SI+ W+ F+ +Y
Sbjct: 1052 TMYTCIVWVVNLQMALAISYFTLIQHIVIWSSIVVWYFFITVY 1094
|
|
| TAIR|locus:2031860 ACA.l "autoinhibited Ca2+/ATPase II" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2259 (800.3 bits), Expect = 3.1e-234, P = 3.1e-234
Identities = 489/1075 (45%), Positives = 655/1075 (60%)
Query: 40 PNF-RTIYCNDREANQPL----RFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMIS 94
P F R +YCN E N P + GN + +TKY + +F+PK LFEQFRRVAN YFL+
Sbjct: 34 PGFSRVVYCN--EPNSPAAERRNYVGNYVRSTKYTLASFIPKSLFEQFRRVANFYFLVTG 91
Query: 95 ILXXXXXXXXXXXXXXXXXXXXXXXXXIKEAWEDWKRFQNDMTINSTPVEVLQGQR-WVS 153
+L +KEA EDW R + D+ +N+ V+V G +
Sbjct: 92 VLSLTALSPYSPISALLPLTFVIAASMVKEAIEDWGRKKQDIEMNNRKVKVHDGNGIFRR 151
Query: 154 IPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWD 213
WR L+VG+IV V++D FFPADLL L+S+ D +CY+ET NLDGETNLK+++ LE T
Sbjct: 152 EGWRDLKVGNIVRVEKDEFFPADLLLLSSSYEDSICYVETMNLDGETNLKVKQGLEATSS 211
Query: 214 YLTPEKA-SEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIG 272
L + E K V+CE PN LYTF G L ++Q LPL+ Q+LLR LRNTEYI G
Sbjct: 212 ALHEDSDFKELKAVVKCEDPNADLYTFVGTLHFEEQRLPLSITQLLLRDSKLRNTEYIYG 271
Query: 273 AVIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIF-IDKKH 331
V+F GH+TKV+ NS + PSKRS +ERK+DK+I +F V+ L+ IGS +F I+ +
Sbjct: 272 VVVFTGHDTKVIQNSTDPPSKRSRIERKMDKIIYLMFG---VVFLMSFIGSIVFGIETRE 328
Query: 332 YYLGLHNMGNS----VEDDQ----FNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETI 383
+ N G + + D F+PD+ + V + FT + LYS IPISLYVSIE +
Sbjct: 329 DRV--RNGGRTERWYLRPDNADIFFDPDRAPMAAVYHFFTAVMLYSYFIPISLYVSIEIV 386
Query: 384 KFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCS 443
K QS +IN D+ MY+ E++ PA ARTSNLNEELG V+ I SDKTGTLT N MEF KCS
Sbjct: 387 KVLQSL-FINNDILMYYEENDKPAHARTSNLNEELGMVDTILSDKTGTLTCNSMEFIKCS 445
Query: 444 XXXXXXXXXXXXXXRGVAQQT-GMKIPEVERSVKAVHE----KGFNFDDPRLLRGAWRNE 498
R +A ++ G + + V KGFNF D R+++G W +
Sbjct: 446 IAGTAYGRGITEVERSMAMRSNGSSLVGDDLDVVVDQSGPKIKGFNFLDERVMKGNWVKQ 505
Query: 499 HNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTM 558
+ ++FFR LA+CHT +PE DE+ ++Y+A SPDEAA V AA+ FGF F+ RT
Sbjct: 506 RDAAVLQKFFRLLAVCHTAIPETDEATGSVSYEAESPDEAAFVVAAREFGFEFFSRTQNG 565
Query: 559 IYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERL 618
I RE + GK + Y +LNVLEFNS RKR SV+ R DGRL+L KGAD+V++ERL
Sbjct: 566 ISFRELDLAS-GKTVERVYRLLNVLEFNSARKRMSVIVRDEDGRLLLLSKGADNVMFERL 624
Query: 619 ANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLR-DREQKL 677
A ++ TREH+ ++ +GLRTL LAYR++ + Y +++ F +AK+S+ DRE +
Sbjct: 625 AKNGRKFEEKTREHVNEYADAGLRTLILAYREVDENEYIEFSKNFNEAKNSVTADRESLI 684
Query: 678 DEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACN 737
DE+ E +E+DL L+G TA+EDKLQ GVP CI+ LA+AGIKIWVLTGDKMETAINI +AC+
Sbjct: 685 DEITEQMERDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACS 744
Query: 738 LINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELN--KCIDEAQQYIHSISG 795
L+ EMKQ II ET I+ +E+ G+ I RE V ++ K + A + S
Sbjct: 745 LLRQEMKQIIINLETPHIKALEKAGEKDAIEHASRESVVNQMEEGKALLTASS--SASSH 802
Query: 796 EKLALIIDGKCLMYALDPSLRXXXXXXXXXXXXXXXXXXXPLQKAQVTSLVKKGARKITL 855
E ALIIDGK L YAL+ + P QKA VT LVK G K TL
Sbjct: 803 EAFALIIDGKSLTYALEDDFKKKFLDLATGCASVICCRSSPKQKALVTRLVKSGTGKTTL 862
Query: 856 SIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICK 915
+IGDGANDV M+Q A IGVGISG EGMQAVM+SD AIAQFR+L LLLVHG W Y RI
Sbjct: 863 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRISS 922
Query: 916 VVLYFFYKNXXXXXXXXXXXXXXXXSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSA 975
++ YFFYKN S Q Y+DWF SL+NV F+S+PVI LG+F++DVSA
Sbjct: 923 MICYFFYKNITFGVTVFLYEAYTSFSAQPAYNDWFLSLFNVFFSSLPVIALGVFDQDVSA 982
Query: 976 SLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSL-VLYNCVTTSSATGQNSSGKIFGI 1034
K+P LYQEG++N+ F+W+ + W F V+ +L + + C + N +GK G
Sbjct: 983 RYCYKFPLLYQEGVQNLLFSWKRIIGWMFNGVFTALAIFFLCKESLKHQLYNPNGKTAGR 1042
Query: 1035 WDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1089
+ +TCVV VNL++ + + T +I + GS+ W++F+ +Y G +TP+
Sbjct: 1043 EILGGTMYTCVVWVVNLQMALAISYFTWLQHIVIWGSVAFWYIFLMIY-GAITPS 1096
|
|
| TAIR|locus:2030180 AT1G72700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1360 (483.8 bits), Expect = 6.5e-234, Sum P(2) = 6.5e-234
Identities = 281/614 (45%), Positives = 390/614 (63%)
Query: 481 KGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAAL 540
KGF F+D RL+ G W E P+ +FFR LAICHT +PE +E + TY+A SPDEA+
Sbjct: 510 KGFGFEDNRLMNGNWLRESQPNDILQFFRILAICHTAIPELNEETGKYTYEAESPDEASF 569
Query: 541 VTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD 600
+ AA+ FGF F++RT + +++RE G++ + Y++LN+LEF S RKR +V+ R +
Sbjct: 570 LAAAREFGFEFFKRTQSSVFIRE-RFSGSGQIIEREYKVLNLLEFTSKRKRMTVIVRDEE 628
Query: 601 GRLVLYCKGADSVIYERLA-NGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERW 659
G+++L CKGADS+I+ERLA NG L TR HL ++G +GLRTL LAYR L D Y W
Sbjct: 629 GQILLLCKGADSIIFERLAKNGKTYLGPTTR-HLTEYGEAGLRTLALAYRKLDEDEYAAW 687
Query: 660 NEKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKI 718
N +F++AK+S+ DR++ L+ A++IEK+L LIG TA+EDKLQ+GVP CI+ LA+AG+K+
Sbjct: 688 NSEFLKAKTSIGSDRDELLETGADMIEKELILIGATAVEDKLQKGVPQCIDKLAQAGLKL 747
Query: 719 WVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778
WVLTGDKMETAINI +AC+L+ M+Q ITS + G + R ++E + +
Sbjct: 748 WVLTGDKMETAINIGFACSLLRQGMRQICITS-------MNSEGGSQDSKRVVKENILNQ 800
Query: 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRXXXXXXXXXXXXXXXXXXXPLQ 838
L K + + + ALIIDGK L YAL+ ++ P Q
Sbjct: 801 LTKAVQMVK--LEKDPHAAFALIIDGKTLTYALEDDMKYQFLALAVDCASVICCRVSPKQ 858
Query: 839 KAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFL 898
KA V LVK+G K TL+IGDGANDV MIQ A IGVGISG EGMQAVMASDF+IAQFRFL
Sbjct: 859 KALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFL 918
Query: 899 TDLLLVHGRWSYLRICKVVLYFFYKNXXXXXXXXXXXXXXXXSGQRFYDDWFQSLYNVIF 958
LL+VHG W Y RI +++ YFFYKN SGQ Y+D++ L+NV+
Sbjct: 919 ERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLFNVVL 978
Query: 959 TSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLY--NC 1016
TS+PVI LG+FE+DVS+ + ++P LYQ+G KN+FF W + W VY SLV++ N
Sbjct: 979 TSLPVIALGVFEQDVSSEICLQFPALYQQGTKNLFFDWSRILGWMCNGVYASLVIFFLNI 1038
Query: 1017 -VTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAW 1075
+ S A N G+ + V T FTC++ N+++ + + T ++ + GSI W
Sbjct: 1039 GIIYSQAFRDN--GQTADMDAVGTTMFTCIIWAANVQIALTMSHFTWIQHVLIWGSIGMW 1096
Query: 1076 FLFVFLYTGIMTPN 1089
+LFV +Y+ +M P+
Sbjct: 1097 YLFVAIYS-MMPPS 1109
|
|
| TAIR|locus:2007858 AT1G17500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2249 (796.7 bits), Expect = 3.5e-233, P = 3.5e-233
Identities = 482/1080 (44%), Positives = 660/1080 (61%)
Query: 38 QAPNF-RTIYCNDREANQ--PLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMIS 94
Q P F RT+YCN ++ PL+++ N ++TT+YN++TF PK L+EQF R AN YFL+ +
Sbjct: 35 QGPGFSRTVYCNQPHMHKKKPLKYRSNYVSTTRYNLITFFPKCLYEQFHRAANFYFLVAA 94
Query: 95 ILXXXXXXXXXXXXXXXXXXXXXXXXXIKEAWEDWKRFQNDMTINSTPVEVLQGQ-RWVS 153
IL +KEA EDW RF D+ IN++ V V + +
Sbjct: 95 ILSVFPLSPFNKWSMIAPLVFVVGLSMLKEALEDWSRFMQDVKINASKVYVHKSDGEFRR 154
Query: 154 IPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWD 213
W+K+ VGDIV V++DGFFPADLL L+S+ DG+CY+ET NLDGETNLK++++LE T
Sbjct: 155 RKWKKISVGDIVKVEKDGFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEVTLS 214
Query: 214 YLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGA 273
+ +F G ++CE PN SLYTF GNL ++Q PL+P+QILLR LRNT Y+ G
Sbjct: 215 LDDYDSFKDFTGIIRCEDPNPSLYTFVGNLEYERQIFPLDPSQILLRDSKLRNTPYVYGV 274
Query: 274 VIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYY 333
V+F GH+TKVM NS PSKRS +E+ +D +I L L ++ LI I S+ F + ++
Sbjct: 275 VVFTGHDTKVMQNSTKSPSKRSRIEKTMDYIIYTL---LVLLILISCISSSGFAWETKFH 331
Query: 334 LGLHNMGNSVEDDQF-NPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYI 392
+ E + NP +++ T + LY +IPISLYVSIE +K Q++ +I
Sbjct: 332 MPKWWYLRPEEPENLTNPSNPVYAGFVHLITALLLYGYLIPISLYVSIEVVKVLQAS-FI 390
Query: 393 NKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSXXXXXXXXX 452
NKDLHMY +ES PA ARTSNLNEELGQV+ I SDKTGTLT N M+F KCS
Sbjct: 391 NKDLHMYDSESGVPAHARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYGVR 450
Query: 453 XXXXXRGVAQQTGMKI------------P-------EVERSVKA-VHEKGFNFDDPRLLR 492
AQQ + + P EVE S+ + KGF F+D RL+
Sbjct: 451 SSEVEVAAAQQMAVDLDEHGEVSSRTSTPRAQARDIEVESSITPRIPIKGFGFEDIRLMD 510
Query: 493 GAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFY 552
G W E + D FFR LAICHT +PE +E + TY+A SPDEA+ +TAA FGF F+
Sbjct: 511 GNWLREPHTDDILLFFRILAICHTAIPELNEETGKYTYEAESPDEASFLTAASEFGFVFF 570
Query: 553 RRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADS 612
+RT + +YV E + G+ + Y++LN+L+F S RKR SVV R +G+++L CKGADS
Sbjct: 571 KRTQSSVYVHE-RLSHSGQTIEREYKVLNLLDFTSKRKRMSVVVRDEEGQILLLCKGADS 629
Query: 613 VIYERLA-NGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSL- 670
+I+ERLA NG L T+ HL ++G +GLRTL L+YR L + Y WN +F +AK+S+
Sbjct: 630 IIFERLAKNGKVYLGPTTK-HLNEYGEAGLRTLALSYRKLDEEEYSAWNAEFHKAKTSIG 688
Query: 671 RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAI 730
DR++ L+ ++++IEKDL L+G TA+EDKLQ+GVP CI+ LA+AG+K+WVLTGDKMETAI
Sbjct: 689 SDRDELLERISDMIEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAI 748
Query: 731 NIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYI 790
NI Y+C+L+ MKQ IT V G + A+ +++ + ++ K + + +
Sbjct: 749 NIGYSCSLLRQGMKQICITV-------VNSEGASQD-AKAVKDNILNQITKAVQMVK--L 798
Query: 791 HSISGEKLALIIDGKCLMYALDPSLRXXXXXXXXXXXXXXXXXXXPLQKAQVTSLVKKGA 850
ALIIDGK L YAL+ ++ P QKA VT LVK+G
Sbjct: 799 EKDPHAAFALIIDGKTLTYALEDEMKYQFLALAVDCASVICCRVSPKQKALVTRLVKEGT 858
Query: 851 RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSY 910
KITL+IGDGANDV MIQ A IGVGISG EGMQAVMASDF+IAQFRFL LL+VHG W Y
Sbjct: 859 GKITLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCY 918
Query: 911 LRICKVVLYFFYKNXXXXXXXXXXXXXXXXSGQRFYDDWFQSLYNVIFTSMPVIMLGLFE 970
RI +++ YFFYKN SGQ Y+D++ L+NV+ TS+PVI LG+FE
Sbjct: 919 KRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLFNVVLTSLPVIALGVFE 978
Query: 971 KDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNC-VTTSSATGQNSSG 1029
+DVS+ + ++P LYQ+G KN+FF W + W VY SLV++ + SG
Sbjct: 979 QDVSSEICLQFPALYQQGKKNLFFDWYRILGWMGNGVYSSLVIFFLNIGIIYEQAFRVSG 1038
Query: 1030 KIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIMTPN 1089
+ + V T FTC++ VN+++ + + T ++ + GSI W+LFV LY G+M P+
Sbjct: 1039 QTADMDAVGTTMFTCIIWAVNVQIALTVSHFTWIQHVLIWGSIGLWYLFVALY-GMMPPS 1097
|
|
| TAIR|locus:2088217 AT3G13900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1322 (470.4 bits), Expect = 3.6e-231, Sum P(2) = 3.6e-231
Identities = 275/611 (45%), Positives = 383/611 (62%)
Query: 481 KGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAAL 540
KGF+F+D RL+ G W NE N D F R LA+CHT +PE DE + TY+A SPDE A
Sbjct: 519 KGFSFEDQRLMGGNWLNEPNSDDILMFLRILAVCHTAIPEVDEDTGKCTYEAESPDEVAF 578
Query: 541 VTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD 600
+ AA FGF F +RT + +++ E H G+ + Y++LNVL+F S RKR SV+ R
Sbjct: 579 LVAAGEFGFEFTKRTQSSVFISERH---SGQPVEREYKVLNVLDFTSKRKRMSVIVRDEK 635
Query: 601 GRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWN 660
G+++L CKGADS+I+ERL+ ++ + T +HL +G +GLRTL L+YR L Y WN
Sbjct: 636 GQILLLCKGADSIIFERLSKNGKNYLEATSKHLNGYGEAGLRTLALSYRKLDETEYSIWN 695
Query: 661 EKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIW 719
+F +AK+S+ DR++ L++V++++EK+L L+G TA+EDKLQ+GVP CI+ LA+AG+KIW
Sbjct: 696 SEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLKIW 755
Query: 720 VLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKREL 779
VLTGDKMETAINI YAC+L+ MKQ I A+R+ E E A RE + L
Sbjct: 756 VLTGDKMETAINIGYACSLLRQGMKQIYI-----ALRNEEGSSQDPEAAA--RENI---L 805
Query: 780 NKCIDEAQQY-IHSISGEKLALIIDGKCLMYALDPSLRXXXXXXXXXXXXXXXXXXXPLQ 838
+ I+ +Q + ALIIDGK L YAL+ ++ P Q
Sbjct: 806 MQIINASQMIKLEKDPHAAFALIIDGKTLTYALEDDIKYQFLALAVDCASVICCRVSPKQ 865
Query: 839 KAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFL 898
KA VT L K+G K TL+IGDGANDV MIQ A IGVGISG EGMQAVMASDF+IAQFRFL
Sbjct: 866 KALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFL 925
Query: 899 TDLLLVHGRWSYLRICKVVLYFFYKNXXXXXXXXXXXXXXXXSGQRFYDDWFQSLYNVIF 958
LL+VHG W Y RI +++ YFFYKN SGQ Y+D + L+NVI
Sbjct: 926 ERLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFEAFTGFSGQAIYNDSYLLLFNVIL 985
Query: 959 TSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNC-V 1017
TS+PVI LG+FE+DVS+ + ++P LYQ+G KN+FF W + W VY S+V+++ +
Sbjct: 986 TSLPVIALGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRIIGWMANGVYASVVIFSLNI 1045
Query: 1018 TTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFL 1077
S G+ + + T FTC++ VN+++ + + T ++ + GSI+ W++
Sbjct: 1046 GIFHVQSFCSGGQTADMDAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVLIWGSIVTWYI 1105
Query: 1078 FVFLYTGIMTP 1088
F+ L+ G++ P
Sbjct: 1106 FLALF-GMLPP 1115
|
|
| TAIR|locus:2020038 AT1G54280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1299 (462.3 bits), Expect = 5.4e-228, Sum P(2) = 5.4e-228
Identities = 271/604 (44%), Positives = 371/604 (61%)
Query: 481 KGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAAL 540
KGF+F+D RL+ W NE N D FFR LA+CHT +PE DE TY+A SPDE A
Sbjct: 519 KGFSFEDNRLMNENWLNEPNSDDILMFFRILAVCHTAIPEVDEDTGMCTYEAESPDEVAF 578
Query: 541 VTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD 600
+ A++ FGF F +RT + +++ E G+ D Y+ILN+L+F S RKR S + R +
Sbjct: 579 LVASREFGFEFTKRTQSSVFIAE-RFSSSGQPVDREYKILNLLDFTSKRKRMSAIVRDEE 637
Query: 601 GRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWN 660
G+++L CKGADS+I+ERL+ ++ T +HL +G +GLRTL L YR L Y WN
Sbjct: 638 GQILLLCKGADSIIFERLSKSGKEYLGATSKHLNVYGEAGLRTLALGYRKLDETEYAAWN 697
Query: 661 EKFIQAKSSL-RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIW 719
+F +AK+S+ DR++ L++V++++EK+L L+G TA+EDKLQ+GVP CI+ LA+AG+KIW
Sbjct: 698 SEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKIW 757
Query: 720 VLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKREL 779
VLTGDKMETAINI YAC+L+ MKQ I S TN VEE E A +E + ++
Sbjct: 758 VLTGDKMETAINIGYACSLLRQGMKQISI-SLTN----VEESSQNSEAAA--KESILMQI 810
Query: 780 NKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRXXXXXXXXXXXXXXXXXXXPLQK 839
+ I ALIIDGK L YAL ++ P QK
Sbjct: 811 TNASQMIK--IEKDPHAAFALIIDGKTLTYALKDDVKYQFLALAVDCASVICCRVSPKQK 868
Query: 840 AQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLT 899
A VT L K+G K TL+IGDGANDV MIQ A IGVGISG EGMQAVMASDF+IAQFRFL
Sbjct: 869 ALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLE 928
Query: 900 DLLLVHGRWSYLRICKVVLYFFYKNXXXXXXXXXXXXXXXXSGQRFYDDWFQSLYNVIFT 959
LL+VHG W Y RI +++ YFFYKN SGQ Y+D + L+NV+ T
Sbjct: 929 RLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFECFTGFSGQSIYNDSYLLLFNVVLT 988
Query: 960 SMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNC-VT 1018
S+PVI LG+FE+DV + + ++P LYQ+G KN+FF W + W VY S+V++ +
Sbjct: 989 SLPVISLGVFEQDVPSDVCLQFPALYQQGPKNLFFDWYRILGWMGNGVYASIVIFTLNLG 1048
Query: 1019 TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLF 1078
S G+ + + T FTC++ VN+++ + + T ++ + GSI AW++F
Sbjct: 1049 IFHVQSFRSDGQTADMNAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVMIWGSIGAWYVF 1108
Query: 1079 VFLY 1082
+ LY
Sbjct: 1109 LALY 1112
|
|
| UNIPROTKB|L7N093 LOC486036 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 793 (284.2 bits), Expect = 3.8e-204, Sum P(3) = 3.8e-204
Identities = 174/368 (47%), Positives = 234/368 (63%)
Query: 386 FQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSXX 445
+ +IN D M++ E+N A ARTSNLNEELGQV+Y+FSDKTGTLT N+M+F KCS
Sbjct: 361 YVQAMFINWDEDMHYKENNIYAIARTSNLNEELGQVKYLFSDKTGTLTCNIMKFKKCSIA 420
Query: 446 XXXXXXXXXXXXRGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEH-NPDAC 504
+ ++ + + SV + + F+DP LL+ + N H D
Sbjct: 421 GIIYGFPQESVRQN---KSSLFFLSLSPSVLT---ESYEFNDPTLLQN-FENGHPTKDYI 473
Query: 505 KEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRES 564
KEF L +CHTV+PE DE ++I YQA+SPDEAALV K GF F RTPT + +
Sbjct: 474 KEFLTLLCVCHTVIPERDE--DKIIYQASSPDEAALVKWVKKLGFVFTTRTPTSVTI--- 528
Query: 565 HVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNED 624
E MG ++ +EILN+LEF+S RKR SV+ R G L LYCKGAD+VIYERL+ +
Sbjct: 529 --EAMG--ENFTFEILNILEFSSNRKRMSVIVRTPTGNLRLYCKGADTVIYERLSEDSLF 584
Query: 625 LKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELI 684
+K+ T HLE F GLRTLC+AY DL+ + Y++W ++ +A S ++DR Q L+E + I
Sbjct: 585 MKE-TLTHLEHFAKGGLRTLCVAYTDLTEEEYQQWLTEYKKASSVIQDRMQSLEECYDKI 643
Query: 685 EKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK 744
EK L+G TAIED+LQ VP I TL +A I+IWVLTGDK ETAINIAY+C LI+ +M
Sbjct: 644 EKKFLLLGATAIEDRLQARVPETIVTLLKANIRIWVLTGDKQETAINIAYSCKLISAQMP 703
Query: 745 QFIITSET 752
+ + + +
Sbjct: 704 RIRLNTHS 711
|
|
| MGI|MGI:1354710 Atp8a2 "ATPase, aminophospholipid transporter-like, class I, type 8A, member 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 837 (299.7 bits), Expect = 1.3e-201, Sum P(3) = 1.3e-201
Identities = 184/412 (44%), Positives = 251/412 (60%)
Query: 36 QPQAPNFRTIYCNDREANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISI 95
Q +AP R IY N N +F N I+T KY+VLTFLP+ L+EQ RR AN +FL I++
Sbjct: 10 QLEAPA-RIIYLNQSHLN---KFCDNRISTAKYSVLTFLPRFLYEQIRRAANAFFLFIAL 65
Query: 96 LXXXXXXXXXXXXXXXX-XXXXXXXXXIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSI 154
L IKE ED+KR + D +N VL+ W +I
Sbjct: 66 LQQIPDVSPTGRYTTLVPLVIILTIAGIKEIIEDFKRHKADNAVNKKKTIVLRNGMWHTI 125
Query: 155 PWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDY 214
W+++ VGDIV V + PAD++ +S+ G+CY+ETANLDGETNLKIR+ L T D
Sbjct: 126 MWKEVAVGDIVKVLNGQYLPADMVLFSSSEPQGMCYVETANLDGETNLKIRQGLSHTTDM 185
Query: 215 LTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQ-KQTLPLNPNQILLRGCSLRNTEYIIGA 273
T + + G ++CE PN LY FTGNL + K ++ L P+QILLRG LRNT+++ G
Sbjct: 186 QTRDVLMKLSGRIECEGPNRHLYDFTGNLHLDGKSSVALGPDQILLRGTQLRNTQWVFGV 245
Query: 274 VIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYY 333
V++ GH++K+M NS P KRS +E+ + IL LF L VM L+ ++G A+F +
Sbjct: 246 VVYTGHDSKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVG-ALF------W 298
Query: 334 LGLHNMGNS--VEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQY 391
G H G S ++ N D F N+ T I LY+ +IPISL V++E +K+ Q+ +
Sbjct: 299 NGSHG-GKSWYIKKMDTNSDN----FGYNLLTFIILYNNLIPISLLVTLEVVKYTQAL-F 352
Query: 392 INKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCS 443
IN D+ MY+ E++TPA ARTSNLNEELGQV+Y+FSDKTGTLT N+M F KCS
Sbjct: 353 INWDMDMYYIENDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCS 404
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9NTI2 | AT8A2_HUMAN | 3, ., 6, ., 3, ., 1 | 0.4423 | 0.9106 | 0.8702 | yes | no |
| Q9XIE6 | ALA3_ARATH | 3, ., 6, ., 3, ., 1 | 0.7949 | 0.9717 | 0.8788 | yes | no |
| P70704 | AT8A1_MOUSE | 3, ., 6, ., 3, ., 1 | 0.44 | 0.8842 | 0.8442 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1097 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-141 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 5e-53 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 2e-30 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-28 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-26 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-15 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 7e-11 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 8e-11 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-08 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 4e-08 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 7e-06 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-05 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-05 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 2e-05 | |
| cd02637 | 65 | cd02637, R3H_PARN, R3H domain of Poly(A)-specific | 4e-05 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 4e-05 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-04 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 3e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 5e-04 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 0.001 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 0.002 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 1432 bits (3709), Expect = 0.0
Identities = 545/1045 (52%), Positives = 706/1045 (67%), Gaps = 41/1045 (3%)
Query: 58 FKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP-MSPVNPVTNVVPLSLV 116
F N I+TTKY VLTFLPK LFEQF+R AN YFL++++L P +SP T++VPL+ V
Sbjct: 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60
Query: 117 LLVSLIKEAWEDWKRFQNDMTINSTPVEVLQG-QRWVSIPWRKLQVGDIVMVKQDGFFPA 175
L+V+ IKEA ED +R + D +N+ EVL+G ++V IPW+ L+VGDIV VK+D PA
Sbjct: 61 LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120
Query: 176 DLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNS 235
DLL L+S+ DGVCY+ETANLDGETNLK+R+ALE T L + F GE++CEQPN S
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNAS 180
Query: 236 LYTFTGNLIMQ-KQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKR 294
LY+F GN+ + + PL+P+ ILLRGC+LRNT+++IG V++ GH+TK+M N+ PSKR
Sbjct: 181 LYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240
Query: 295 STLERKLDKLILALFATLTVMCLICAIGSAIFID---KKHYYLGLHNMGNSVEDDQFNPD 351
S LE++L+ LI+ LF L V+CLI ++G+ I+ D K +Y+ L + + F
Sbjct: 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGF--- 297
Query: 352 KRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASART 411
+ T + L+S +IPISLYVS+E +K Q+ +IN DL MYH +++TPAS RT
Sbjct: 298 -------FSFLTFLILFSSLIPISLYVSLELVKSVQA-YFINSDLQMYHEKTDTPASVRT 349
Query: 412 SNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEV 471
SNLNEELGQVEYIFSDKTGTLT+N+MEF KCSI G YG G TEI+ G+ ++ G +
Sbjct: 350 SNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENE 409
Query: 472 ERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEG-DESPERITY 530
+ V KGF F DPRL+ N+ N EFF LA+CHTV+PE D+ PE ITY
Sbjct: 410 NSML--VESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITY 467
Query: 531 QAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRK 590
QAASPDEAALV AA++ GF F+ RTP I + + YEILNVLEFNS RK
Sbjct: 468 QAASPDEAALVKAARDVGFVFFERTPKSISLLIEMH-----GETKEYEILNVLEFNSDRK 522
Query: 591 RQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRD 650
R SV+ R DGR+ L CKGAD+VI++RL++G + + T+EHLE + S GLRTLC+AYR+
Sbjct: 523 RMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRE 582
Query: 651 LSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIET 710
LS + YE WNE++ +A ++L DRE+KLD VAE IEKDL L+G TAIEDKLQEGVP IE
Sbjct: 583 LSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIEL 642
Query: 711 LARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARF 770
L +AGIKIWVLTGDK+ETAINI Y+C L++ M+Q +ITS++ + R
Sbjct: 643 LRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSL------------DATRS 690
Query: 771 MREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVV 830
+ +K L +E + +AL+IDGK L YALD L L L+L C +V+
Sbjct: 691 VEAAIKFGLEGTSEEFN---NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVI 747
Query: 831 CCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDF 890
CCRVSP QKA V LVKK K TL+IGDGANDVSMIQ A +GVGISG+EGMQAVMASDF
Sbjct: 748 CCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDF 807
Query: 891 AIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWF 950
AI QFRFLT LLLVHGRWSY RI K++LYFFYKNL F + QFW++F GFSGQ Y+ W+
Sbjct: 808 AIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWY 867
Query: 951 QSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQS 1010
LYNV FT++PVI LG+F++DVSASLS +YPQLY+EG K F+ + W +YQS
Sbjct: 868 MVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQS 927
Query: 1011 LVLYNCVTTSSATGQ-NSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVG 1069
LV++ + G SSG + V + FT +VV VNL++ + N IT+
Sbjct: 928 LVIFFFPMFAYILGDFVSSGSVDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIW 987
Query: 1070 GSILAWFLFVFLYTGIMTPNDRQVS 1094
GSIL W +FV +Y+ I +
Sbjct: 988 GSILVWLIFVIVYSSIFPSPAFYKA 1012
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 734 bits (1897), Expect = 0.0
Identities = 409/1074 (38%), Positives = 611/1074 (56%), Gaps = 84/1074 (7%)
Query: 43 RTIYCNDRE-ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPM 101
R +Y ND E +N+ F GNSI T KY+V +FLP+ LFEQF RVA YFL+I++L+ P
Sbjct: 71 RLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQ 130
Query: 102 SPV-NPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQ 160
V +++PL+ VLLV+ +K+A+EDW+R ++D N+ VL ++ W+ ++
Sbjct: 131 LAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIR 190
Query: 161 VGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKA 220
VG+I+ ++ + P D++ L++++ GV Y++T NLDGE+NLK R A + T + PEK
Sbjct: 191 VGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKI-PEKE 249
Query: 221 SEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHE 280
G ++CE+PN ++Y F N+ + + L L P+ I+LRGC L+NT + IG ++ G E
Sbjct: 250 K-INGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRE 308
Query: 281 TKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAI-------------FI 327
TK M+N+ PSKRS LE +++ I+ L L +C I ++ +A+ F
Sbjct: 309 TKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFY 368
Query: 328 DKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQ 387
+K + + +N + ++ +IPISLY+S+E ++ Q
Sbjct: 369 RRKDF--------SEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQ 420
Query: 388 STQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGE 447
+ I D MY SN+ R N+NE+LGQ++Y+FSDKTGTLT N MEF SI G
Sbjct: 421 AYFMIR-DDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGV 479
Query: 448 IYGTGITEIERGVAQQTGM---KIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDAC 504
Y G T + A + KI + VK DP+LL + ++ + +
Sbjct: 480 DYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKV---------DPQLLELS-KSGKDTEEA 529
Query: 505 K---EFFRCLAICHTVLP-----EGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTP 556
K +FF LA C+T++P D + + + YQ SPDE ALV AA +GF RT
Sbjct: 530 KHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTS 589
Query: 557 TMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYE 616
I + + G+ Q + +L + EF+S RKR SV+ D + ++ KGAD+ ++
Sbjct: 590 GHIVI-----DIHGERQR--FNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFS 642
Query: 617 RLANG-NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQ 675
+ N ++ + T HL + S GLRTL + R+L+ +E+W+ F A ++L R
Sbjct: 643 VIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAA 702
Query: 676 KLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 735
L +VA +E +LT++G +AIEDKLQ+GVP IE+L AGIK+WVLTGDK ETAI+I Y+
Sbjct: 703 LLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYS 762
Query: 736 CNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISG 795
L+ N+M Q II S + E +E A M +++ + Q S
Sbjct: 763 SKLLTNKMTQIIINSNSK-----ESCRKSLEDALVMSKKLT-----TVSGISQNTGGSSA 812
Query: 796 EK---LALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARK 852
+ALIIDG L+Y LD L L L+ CS V+CCRV+PLQKA + +LVK
Sbjct: 813 AASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSD 872
Query: 853 ITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLR 912
+TL+IGDGANDVSMIQ A +GVGISGQEG QAVMASDFA+ QFRFL LLLVHG W+Y R
Sbjct: 873 MTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQR 932
Query: 913 ICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKD 972
+ ++LY FY+N F L FW+ T F+ ++W LY+VI+T++P I++G+ +KD
Sbjct: 933 MGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKD 992
Query: 973 VSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTS--SATGQNSSGK 1030
+S KYPQLY G + + ++ + +++QS V++ + ++T SS
Sbjct: 993 LSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWASTIDGSS-- 1050
Query: 1031 IFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYIT---VGGSILAWFLFVFL 1081
I D+ T+A VV+ VNL L M I R+++IT + GSI+A F+ V +
Sbjct: 1051 ---IGDLWTLA---VVILVNLHLAM---DIIRWNWITHAAIWGSIVATFICVIV 1095
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 446 bits (1150), Expect = e-141
Identities = 234/1052 (22%), Positives = 373/1052 (35%), Gaps = 258/1052 (24%)
Query: 57 RFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFL--MISILSTTPMSPVNPVTNVVPLS 114
K + + L K L + + ++S + ++ +
Sbjct: 54 LKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVDAIVILLVV 113
Query: 115 LVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFP 174
++ + + + K + ++S +VL+ ++V IP +L GDIV+++ P
Sbjct: 114 VINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVP 173
Query: 175 ADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNN 234
ADL L S++ ++ + L GE+ ++AL T + + P
Sbjct: 174 ADLRLLESSDL----EVDESALTGESLPVEKQALPLT----------------KSDAPLG 213
Query: 235 SLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKR 294
L+ + +L G ++ + G V+ G ET+ + +P+K+
Sbjct: 214 -----------------LDRDNMLFSGTTVVSGR-AKGIVVATGFETEFGKIARLLPTKK 255
Query: 295 ST---LERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPD 351
L+RKL+KL L V+ L+ + + GL
Sbjct: 256 EVKTPLQRKLNKLGKFLL----VLALVLGALVFV-VGLFRGGNGLLES------------ 298
Query: 352 KRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASART 411
T + L +P L + Q + KD + R+
Sbjct: 299 ---------FLTALALAVAAVPEGLPAVVTIALALG-AQRMAKDNAIV----------RS 338
Query: 412 SNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEV 471
N E LG V+ I SDKTGTLT+N M K I G
Sbjct: 339 LNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG------------------------ 374
Query: 472 ERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQ 531
G + DD L + A F A+C++V PE + YQ
Sbjct: 375 ----------GKDIDDKDL--------KDSPALLRFLLAAALCNSVTPEKNGW-----YQ 411
Query: 532 AASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKR 591
A P E ALV A+ GF V Y IL + F+S RKR
Sbjct: 412 AGDPTEGALVEFAEKLGFSLDLSGLE-----------------VEYPILAEIPFDSERKR 454
Query: 592 QSVVCRYADGRLVLYCKGADSVIYER------LANGNEDLKKVTREHLEQFGSSGLRTLC 645
SV+ + +G+ +L+ KGA VI ER L E+ + E +++ S GLR L
Sbjct: 455 MSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLA 514
Query: 646 LAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVP 705
+AY+ L DR +K DEV E IE DL +G T IED +E V
Sbjct: 515 VAYKKL--------------------DRAEKDDEVDE-IESDLVFLGLTGIEDPPREDVK 553
Query: 706 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPV 765
IE L AGIK+W++TGD +ETAI IA C + +I
Sbjct: 554 EAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDG--------------- 598
Query: 766 EIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLN 825
EL+ DE L L
Sbjct: 599 -----------AELDALSDEE--------------------------------LAELVEE 615
Query: 826 CSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAV 885
S V RVSP QKA++ ++K + + GDG ND ++AA +G+ + G EG A
Sbjct: 616 LS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGIAM-GGEGTDAA 671
Query: 886 MASD--FAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQ 943
+ + L +V GR Y+ I K +LY KN+ LT ++ F+
Sbjct: 672 KEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSL---FNLF 728
Query: 944 RF-YDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIW 1002
N++ S+P + LG+ + + S K P G + F ++ +
Sbjct: 729 FLPLTPLQLLWINLLTDSLPALALGVEDPE---SDVMKRP---PRGPEEGLFNRKIFWRF 782
Query: 1003 AFFSVYQSLV-------LYNCVTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLM 1055
S + LY ++ G + + T AFT +V+ L L
Sbjct: 783 ILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALL-----QTTAFTVLVLIQLLLTL- 836
Query: 1056 MCNTITRFHYITVGGSILAWFLFVFLYTGIMT 1087
+ R ++ S +L + + +
Sbjct: 837 AVRSRGRPFLSSLLFSNKYLWLALLVIIILQL 868
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 194 bits (496), Expect = 5e-53
Identities = 86/386 (22%), Positives = 138/386 (35%), Gaps = 77/386 (19%)
Query: 107 VTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVM 166
+ L VLLV K ED R +D +N+ P VL+ W IP + L GD+V+
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVL 59
Query: 167 VKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGE 226
VK PAD + L+ G C+++ +NL GE+N ++ AL+ T G
Sbjct: 60 VKSGETVPADGVLLS-----GSCFVDESNLTGESNPVLKTALKETQ-----------SGT 103
Query: 227 VQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMN 286
+ + Y F G LI+ + P IL T I V+ G ET
Sbjct: 104 ITGDLVFAGTYVFGGTLIVV-----VTPTGIL-------TTVGRIAVVVKTGFET----- 146
Query: 287 SMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDD 346
R+ L+ K D+L +F ++ +
Sbjct: 147 -------RTPLQSKRDRLENFIFILFLLLLALAVFLYLFIR------------------- 180
Query: 347 QFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTP 406
+L ++ + ++P +L ++ D +
Sbjct: 181 -GWDPNSIFKALLRALIVLVI---VVPPALPAAVTVALAVG-------DARLAKK----G 225
Query: 407 ASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTG- 465
R N EELG+V+Y+ SDKTGTLT+N M I G + + +G
Sbjct: 226 ILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSSLVACDNNYLSGD 285
Query: 466 -MKIPEVERSVKAVHEKGFNFDDPRL 490
M+ ++ + N + L
Sbjct: 286 PMEKALLKSAELVGKADKGNKEYKIL 311
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 127 bits (320), Expect = 2e-30
Identities = 54/213 (25%), Positives = 74/213 (34%), Gaps = 61/213 (28%)
Query: 527 RITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFN 586
Y + P E AL+ +A+ G Y+IL+V F+
Sbjct: 278 DNNYLSGDPMEKALLKSAELVGKADKGNKE--------------------YKILDVFPFS 317
Query: 587 STRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCL 646
S KR SV+ DG +L+ KGA I ER N E + GLR L
Sbjct: 318 SVLKRMSVIVETPDGSDLLFVKGAPEFILERCNN--------YEEKYLELARQGLRVLAF 369
Query: 647 AYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPA 706
A ++L DL +G ED L+
Sbjct: 370 ASKELED---------------------------------DLEFLGLITFEDPLRPDAKE 396
Query: 707 CIETLARAGIKIWVLTGDKMETAINIAYACNLI 739
IE L AGIK+ ++TGD + TA IA +
Sbjct: 397 TIEELKAAGIKVVMITGDNVLTAKAIAKELGID 429
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 2e-28
Identities = 101/487 (20%), Positives = 173/487 (35%), Gaps = 110/487 (22%)
Query: 419 GQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAV 478
G+++ DKTGTLT + ++ RGV
Sbjct: 446 GKIDVCCFDKTGTLTEDGLDL------------------RGVQ-----------GLSGNQ 476
Query: 479 HEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVL-----PEGDESPERITYQAA 533
+D L + LA CH++ GD
Sbjct: 477 EFLKIVTEDSSLKPS------------ITHKALATCHSLTKLEGKLVGD----------- 513
Query: 534 SPDEAALVTAAKNFGFFFYRRTPTMIYVRES--HVEKMGKMQDVC----YEILNVLEFNS 587
P + + A G+ T+ ES + ++ I+ +F+S
Sbjct: 514 -PLDKKMFEA---TGW-------TLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSS 562
Query: 588 TRKRQSVVCRYAD-GRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCL 646
+R SV+ D + KGA I + E + +E L+ + G R L L
Sbjct: 563 ALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP--ETVPSDYQEVLKSYTREGYRVLAL 620
Query: 647 AYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPA 706
AY++L K K+ R+ +E +LT +G E+ L+
Sbjct: 621 AYKEL---------PKLTLQKAQDLSRDA--------VESNLTFLGFIVFENPLKPDTKE 663
Query: 707 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE 766
I+ L RA I+ ++TGD TA+++A C ++N + +E E G P +
Sbjct: 664 VIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEP------PESGKPNQ 717
Query: 767 IARFMREEVKRELNKC---IDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLS 823
I + + + + Q + + + L + GK L +LL L
Sbjct: 718 IKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAF-AVLQAHSPELLLRLL 776
Query: 824 LNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQ 883
+ + V R++P QK + L++K GDGAND ++ A +G+ +S E
Sbjct: 777 SHTT--VFARMAPDQKETLVELLQKLDY-TVGMCGDGANDCGALKQADVGISLSEAE--- 830
Query: 884 AVMASDF 890
A +A+ F
Sbjct: 831 ASVAAPF 837
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 1e-26
Identities = 184/853 (21%), Positives = 296/853 (34%), Gaps = 256/853 (30%)
Query: 116 VLLVSLIKEAWEDWK---RFQNDMTINST-PVEVLQGQRWVSIPWRKLQVGDIVMVKQDG 171
V+LV L+ A D+K +F+ S + V++G + I + VGDIV +
Sbjct: 139 VILVVLVT-AVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGD 197
Query: 172 FFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQ 231
PA DGV +I +L + E + +T E KG VQ
Sbjct: 198 VVPA----------DGV-FISGLSL---------EIDESS---ITGESDPIKKGPVQ--- 231
Query: 232 PNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE--YIIGAVIFAGHETKVMMNSMN 289
+ LL G + ++ AV K+MM
Sbjct: 232 -----------------------DPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQ 268
Query: 290 IPSKRSTLERKLDKL--ILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQ 347
+ L+ KL +L ++ F + + + + + + ++ ED Q
Sbjct: 269 AGEDSTPLQEKLSELAGLIGKFG-----MGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQ 323
Query: 348 FNPDKRFLVFVLNMFTLITLYSP-IIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTP 406
FL + T++ + P +P+++ TI S + + KD ++
Sbjct: 324 -----TFLDHFIIAVTIVVVAVPEGLPLAV-----TIALAYSMKKMMKDNNL-------- 365
Query: 407 ASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGM 466
R E +G I SDKTGTLT+N+M + IG + + R V +
Sbjct: 366 --VRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNV------RDVLR---- 413
Query: 467 KIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPE 526
+P+ R++ L+ G N + E
Sbjct: 414 NVPKHVRNI--------------LVEGISLN------------------SSSEEV-VDRG 440
Query: 527 RITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFN 586
S E AL+ R + E V+ + FN
Sbjct: 441 GKRAFIGSKTECALLDFGLLLL-----RDYQEVRAEEKVVK--------------IYPFN 481
Query: 587 STRKRQSVVCRYADGRLVLYCKGADSVI-----YERLANG-----NEDLKKVTREHLEQF 636
S RK SVV +++ G+ + KGA ++ +NG ++D K + +E
Sbjct: 482 SERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPL 541
Query: 637 GSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAI 696
S LRT+CLAYRD +P+ + R + K LTLIG I
Sbjct: 542 ASDALRTICLAYRDFAPEEFPRK----------------------DYPNKGLTLIGVVGI 579
Query: 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN-----NEMKQFIITSE 751
+D L+ GV ++ RAGI + ++TGD ++TA IA C ++ E K+F
Sbjct: 580 KDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEF----- 634
Query: 752 TNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYAL 811
R V E M +
Sbjct: 635 --------------------RSLVYEE-----------------------------MDPI 645
Query: 812 DPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAH 871
P LRV+ R SPL K Q+ L+ K ++ GDG ND ++ A
Sbjct: 646 LPKLRVL-------------ARSSPLDK-QLLVLMLKDMGEVVAVTGDGTNDAPALKLAD 691
Query: 872 IG--VGISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFT 928
+G +GISG E A ASD + F + + + GR Y I K + + N+
Sbjct: 692 VGFSMGISGTE--VAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAV 749
Query: 929 LTQFWFTFQTGFS 941
+ F + + S
Sbjct: 750 ILTFVGSCISSTS 762
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 2e-15
Identities = 109/511 (21%), Positives = 168/511 (32%), Gaps = 121/511 (23%)
Query: 416 EELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSV 475
E LG I SDKTGTLT N M V + + +
Sbjct: 284 ETLGCTTVICSDKTGTLTTNQMS---------------------VCKVVALDPSSSSLNE 322
Query: 476 KAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAAS- 534
V + + + +E A+C+ D + + Y+
Sbjct: 323 FCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCND--SSLDFNERKGVYEKVGE 380
Query: 535 PDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSV 594
EAAL + G + + + + ++ L LEF+ RK SV
Sbjct: 381 ATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDK---FKKLATLEFSRDRKSMSV 437
Query: 595 VCRYADGRLVLYCKGADSVIYER---LANGNE--------DLKKVTREHLEQFGSSGLRT 643
+C+ + L+ KGA + ER + NG+ + E + LR
Sbjct: 438 LCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRC 496
Query: 644 LCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVA--ELIEKDLTLIGCTAIEDKLQ 701
L LA++D+ E L + A E IE DLT IG + D +
Sbjct: 497 LALAFKDIPD-----------------PREEDLLSDPANFEAIESDLTFIGVVGMLDPPR 539
Query: 702 EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEER 761
V IE AGI++ ++TGD ETA I ++ I S +
Sbjct: 540 PEVADAIEKCRTAGIRVIMITGDNKETAEAIC----------RRIGIFSPDEDVTFKSFT 589
Query: 762 GDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLN 821
G RE ++ Q L ++PS
Sbjct: 590 G--------------REFDEMGPAKQ-----------RAACRSAVLFSRVEPS------- 617
Query: 822 LSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQE 880
K+++ L+++ +I GDG ND ++ A IG+ + SG E
Sbjct: 618 ----------------HKSELVELLQE-QGEIVAMTGDGVNDAPALKKADIGIAMGSGTE 660
Query: 881 GMQAVMASDFAIAQFRFLTDLLLVH-GRWSY 910
A ASD +A F T + V GR Y
Sbjct: 661 --VAKEASDMVLADDNFATIVAAVEEGRAIY 689
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 7e-11
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 20/85 (23%)
Query: 534 SPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQS 593
P E+AL+ A+ G + +R Y + + FNS RKR S
Sbjct: 22 DPTESALLVFAEKLGID-------VEELRAR------------YPRVAEIPFNSERKRMS 62
Query: 594 VVCRYA-DGRLVLYCKGADSVIYER 617
V + D L+ KGA I ER
Sbjct: 63 TVHKLEDDDGYRLFVKGAPERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 8e-11
Identities = 73/337 (21%), Positives = 115/337 (34%), Gaps = 112/337 (33%)
Query: 416 EELGQVEYIFSDKTGTLTRNLMEFFKC----SIGGEIYGTGITEIERGVAQQTGMKI--- 468
E LG V I SDKTGTLT+N M K + + + + + +
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYT 378
Query: 469 PEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERI 528
V R ++A G ++ + RNE + T+L
Sbjct: 379 VAVSRILEA----GNLCNNAKF-----RNEAD---------------TLL---------- 404
Query: 529 TYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNST 588
+P + AL+ FG R T Y+R + V F+S
Sbjct: 405 ----GNPTDVALIELLMKFGLDDLRET----YIRVAEVP-----------------FSSE 439
Query: 589 RKRQSVVCRYADGR-LVLYCKGADSVIYE----------RLANGNEDLKKVTREHLEQFG 637
RK +V C + R + + KGA + + + + + V +E +
Sbjct: 440 RKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMA 499
Query: 638 SSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKD-LTLIGCTAI 696
S+GLR + A EK LT +G I
Sbjct: 500 SAGLRVIAFAS----------------------------------GPEKGQLTFLGLVGI 525
Query: 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIA 733
D + GV + TL G++I ++TGD ETA++IA
Sbjct: 526 NDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA 562
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 1e-08
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 10/110 (9%)
Query: 829 VVCCRVSPLQKAQ-VTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMA 887
V RVSP QK Q V +L KKG I GDG ND ++ A +G+ + + A
Sbjct: 429 DVFARVSPEQKLQIVEALQKKG--HIVAMTGDGVNDAPALKKADVGIAMGAKA------A 480
Query: 888 SDFAIAQFRFLTDLLLV-HGRWSYLRICKVVLYFFYKNLTFTLTQFWFTF 936
+D + + V GR + I + + NL
Sbjct: 481 ADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIV 530
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 4e-08
Identities = 142/677 (20%), Positives = 237/677 (35%), Gaps = 131/677 (19%)
Query: 113 LSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGF 172
++L +L+ I+E ++ K + + S V++ + +I L GDI ++K
Sbjct: 91 IALNILIGFIQE-YKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDT 149
Query: 173 FPADLLFLASTNAD---------GVCYIETANL----DGETNLKIRKALERTWDYLTPEK 219
PADL + + N D + I+ A+ + +T + R L + +T +
Sbjct: 150 IPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGR 209
Query: 220 ASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQI------LLRGCSLRNTEYIIGA 273
A KG N+ + L L P + L L+ T+ + GA
Sbjct: 210 A---KGICIATALNSEIGAIAAGL-QGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGA 265
Query: 274 VIFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYY 333
+ +N+ + L RKL KL + LF C+ AI AI + H
Sbjct: 266 FL-----------GLNVGTP---LHRKLSKLAVILF------CI--AIIFAIIVMAAH-- 301
Query: 334 LGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYIN 393
+F+ DK ++ I L IIP SL + +
Sbjct: 302 -------------KFDVDKEVAIYA------ICLAISIIPESLIAVLSITMAMGAANMSK 342
Query: 394 KDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLM---EFFKCSIGGEIYG 450
+++ + ++ E LG V I SDKTGT+T+ M + + G
Sbjct: 343 RNVIVRKLDAL-----------EALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISID 391
Query: 451 TGITEIERGVAQQTGMKIPEVERSVKAVHEKGF-----NFDDPRLLRGAWRNEHNPDACK 505
+G IP + +E F D L + + D
Sbjct: 392 NSDDAFNPNEGNVSG--IPRFSPYEYSHNEAADQDILKEFKD-ELKEIDLPEDIDMDLFI 448
Query: 506 EFFRCLAICH--TVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRT-------- 555
+ A+ + TV + D + + P E A+ AK F T
Sbjct: 449 KLLETAALANIATVFKD-DATDCWKAH--GDPTEIAIHVFAKKFDLPHNALTGEEDLLKS 505
Query: 556 -PTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRL-VLYCKGADSV 613
H EK G Q +E + F+S KR + + G +Y KGA
Sbjct: 506 NENDQSSLSQHNEKPGSAQ---FEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFER 562
Query: 614 IYERLA--NGNEDLKKVT---------REHLEQFGSSGLRTLCLAYRDLSPDMYERWNEK 662
I E + NG + +K ++E + GLR L A + + +++
Sbjct: 563 IIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKA--DNNDDQ 620
Query: 663 FIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLT 722
++ ++ R E DL +G I D + +E +AGI + +LT
Sbjct: 621 -LKNETLNRA----------TAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLT 669
Query: 723 GDKMETAINIAYACNLI 739
GD ETA IA +I
Sbjct: 670 GDFPETAKAIAQEVGII 686
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 7e-06
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 3/114 (2%)
Query: 623 EDLKKVTREHLEQFGSSGLRTLCLAYRD--LSPDMYERWNEKFIQAKSSLRDREQKLDEV 680
L+ +E +E+ G+ + + + + I A L + + +
Sbjct: 306 RGLELPKQEDVEEVPGKGVEATVDGGEEVRIGNPRFLELAIEPISASPDLLNEGESQGKT 365
Query: 681 AELIEKDLTLIGCTAIEDKLQEGVPACIETLARAG-IKIWVLTGDKMETAINIA 733
+ D L+G A+ D+L+ I L RAG IK+ +LTGD A +A
Sbjct: 366 VVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA 419
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 1e-05
Identities = 82/313 (26%), Positives = 121/313 (38%), Gaps = 71/313 (22%)
Query: 585 FNSTRKRQSVVCRYAD---GRLVLYCKGADSVIYER----LANGNED-LKKVTREHLE-- 634
FNST K Q + D R +L KGA I ER L +G E L + +E +
Sbjct: 456 FNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNA 515
Query: 635 --QFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIG 692
+ G G R L + L + + +F D+V + L +G
Sbjct: 516 YLELGGLGERVLGFCHLYLPDEQFPE-GFQF------------DTDDVNFPTDN-LCFVG 561
Query: 693 CTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSET 752
++ D + VP + AGIK+ ++TGD TA IA K I SE
Sbjct: 562 LISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA----------KGVGIISEG 611
Query: 753 N-AIRDVEERGD-PVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYA 810
N + D+ R + PV + R+ C+ + G L + +
Sbjct: 612 NETVEDIAARLNIPVS------QVNPRDAKACV---------VHGSDLKDMTSEQ----- 651
Query: 811 LDPSLRVILLNLSLNCSSVVCCRVSPLQK-AQVTSLVKKGARKITLSIGDGANDVSMIQA 869
LD L+ + +V R SP QK V ++GA I GDG ND ++
Sbjct: 652 LDEILK--------YHTEIVFARTSPQQKLIIVEGCQRQGA--IVAVTGDGVNDSPALKK 701
Query: 870 AHIGV--GISGQE 880
A IGV GI+G +
Sbjct: 702 ADIGVAMGIAGSD 714
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 1e-05
Identities = 42/206 (20%), Positives = 73/206 (35%), Gaps = 35/206 (16%)
Query: 564 SHVEKMGKMQDVC-YEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYE--RLAN 620
V++ ++ ++ + F+ R+R SVV L CKGA I
Sbjct: 427 EGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVR 486
Query: 621 GNEDLKKVTREHLEQ-------FGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDR 673
N ++ + L + GLR + +A + L + D
Sbjct: 487 HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAR----------EGDYQRAD- 535
Query: 674 EQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIA 733
E DL L G A D +E ++ L +G+ + +LTGD A A
Sbjct: 536 -----------ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVA---A 581
Query: 734 YACNLINNEMKQFIITSETNAIRDVE 759
C+ + + + +I S+ + D E
Sbjct: 582 KVCHEVGLDAGEVLIGSDIETLSDDE 607
|
Length = 902 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 2e-05
Identities = 42/223 (18%), Positives = 80/223 (35%), Gaps = 69/223 (30%)
Query: 113 LSLVLLVSLIKEAWEDWK---RFQ--NDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMV 167
L LVL+ +L+ EA+++++ + + T V++ + IP +L VGDIV++
Sbjct: 3 LLLVLINALL-EAYQEYRARKALKALKKLL-PPTAATVIRDGKEEEIPADELVVGDIVLL 60
Query: 168 KQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEV 227
K PAD + +G ++ + L GE+ P
Sbjct: 61 KPGDRVPADGRII-----EGSLEVDESALTGES---------------LP---------- 90
Query: 228 QCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHET---KVM 284
+ + + G + + E + V G +T K+
Sbjct: 91 ----------------------VEKSRGDTVFAGTVVLSGE-LKVIVTATGEDTELGKIA 127
Query: 285 MNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFI 327
S ++ L+R LDKL L ++ A+ +F+
Sbjct: 128 RLVEEAKSAKTPLQRLLDKLAKILV------PIVLALAILVFL 164
|
Length = 222 |
| >gnl|CDD|100066 cd02637, R3H_PARN, R3H domain of Poly(A)-specific ribonuclease (PARN) | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 4e-05
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 670 LRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETA 729
+ + ++++ E E DL L C + KL +E GI + L +K E
Sbjct: 1 IDEVIERIEAFLESEEDDLELEPCNGFQRKLIYQT---LEQKYPKGIHVETLETEKKERL 57
Query: 730 INIA 733
I I
Sbjct: 58 IVIE 61
|
PARN is a poly(A)-specific 3' exonuclease from the RNase D family that, in Xenopus, deadenylates a specific class of maternal mRNAs which results in their translational repression. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA. Length = 65 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 4e-05
Identities = 60/305 (19%), Positives = 103/305 (33%), Gaps = 96/305 (31%)
Query: 583 LEFNSTRKRQSVVCRYADGRLVLYCKGADSVIY---------ERLANGNEDLKKVTREHL 633
+ F+ R+R SVV L CKGA + + +E K ++
Sbjct: 412 IPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMT 471
Query: 634 EQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGC 693
+ G+R + +A + +L+ E + E + L + G
Sbjct: 472 AEMNRQGIRVIAVATK-------------------TLKVGEADFTKTDE---EQLIIEGF 509
Query: 694 TAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETN 753
D +E I L + GI + VLTGD I A C + + F++ +
Sbjct: 510 LGFLDPPKESTKEAIAALFKNGINVKVLTGD---NEIVTARICQEVGIDANDFLLGA--- 563
Query: 754 AIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDP 813
D+EE D EE+ REL K
Sbjct: 564 ---DIEELSD---------EELARELRK-------------------------------- 579
Query: 814 SLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIG 873
+ R++P+QK+++ L+KK + +GDG ND ++ A +G
Sbjct: 580 --------------YHIFARLTPMQKSRIIGLLKKAGHTVGF-LGDGINDAPALRKADVG 624
Query: 874 VGISG 878
+ +
Sbjct: 625 ISVDT 629
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 2e-04
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 35/154 (22%)
Query: 583 LEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLA------NGNED--LKKVTREHL- 633
L F+ R+R SVV A G+ +L CKGA + E LA +G+ L + RE L
Sbjct: 445 LPFDFVRRRLSVVVEDAQGQHLLICKGA---VEEMLAVATHVRDGDTVRPLDEARRERLL 501
Query: 634 ---EQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTL 690
E + + G R L +A R++ ++++ + E+DL +
Sbjct: 502 ALAEAYNADGFRVLLVATREIPGG----------ESRAQYSTAD----------ERDLVI 541
Query: 691 IGCTAIEDKLQEGVPACIETLARAGIKIWVLTGD 724
G D +E I L G+ + VLTGD
Sbjct: 542 RGFLTFLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 3e-04
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 660 NEKFIQAK----SSLRDREQKLDEVAE---LIEKDLTLIGCTAIEDKLQEGVPACIETLA 712
N + + + L +R + L+ + + D L+G A+ D+L+ I L
Sbjct: 491 NARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALK 550
Query: 713 RAGIKIWVLTGDKMETAINIA 733
GIK+ +LTGD TA IA
Sbjct: 551 ALGIKVVMLTGDNRRTAEAIA 571
|
Length = 713 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 854 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLL 902
T+++GDGAND+SMI+AA +G+ + + +Q +D I + LTD+L
Sbjct: 171 TVAVGDGANDLSMIKAAGLGIAFNAKPKLQQK--ADICI-NKKDLTDIL 216
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 0.001
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 660 NEKFIQAKSSLRD--REQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIK 717
NEK + D E+ + L+ + L G A+ D+L+ I+ L R GI+
Sbjct: 373 NEKLLGENGLKTDGEVEEGGGTTSVLVAVNGELAGVLALADQLKPEAKEVIQALKRRGIE 432
Query: 718 IWVLTGDKMETAINIA 733
+LTGD +TA +A
Sbjct: 433 PVMLTGDNRKTAKAVA 448
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 653 PDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLA 712
++ R + + + L + + V + DL ++G A+ D L G ++ L
Sbjct: 50 EELVRRLLLRALAGEELLEELLRAGATV--VAVLDLVVLGLIALTDPLYPGAREALKELK 107
Query: 713 RAGIKIWVLTGDKMETAINIA 733
AGIK+ +LTGD TA IA
Sbjct: 108 EAGIKLAILTGDNRLTANAIA 128
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1097 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.97 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.84 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.47 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.45 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.27 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.11 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.1 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.05 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.02 | |
| PLN02887 | 580 | hydrolase family protein | 98.94 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.94 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.89 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.88 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.86 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.83 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.79 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.78 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.72 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.67 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.67 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.65 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.48 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.46 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.46 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 98.45 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.41 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.4 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.37 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.36 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.35 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.31 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.3 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.3 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.28 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.27 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.21 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.16 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.11 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.08 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 97.98 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.98 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.86 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.85 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.84 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.72 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.7 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.65 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.56 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.55 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.54 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.53 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.46 | |
| PLN02423 | 245 | phosphomannomutase | 97.38 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.38 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.22 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.14 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.12 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.08 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.95 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.92 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.91 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 96.82 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.81 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.77 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.66 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.65 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.63 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.62 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.62 | |
| PLN03017 | 366 | trehalose-phosphatase | 96.61 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.32 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 96.23 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 96.17 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.09 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.03 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.01 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 95.99 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 95.94 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.92 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.91 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 95.91 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 95.75 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 95.67 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.45 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.43 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.22 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 95.22 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.02 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.01 | |
| PLN02940 | 382 | riboflavin kinase | 94.98 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.8 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 94.78 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 94.66 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 94.65 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.63 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 94.49 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 94.42 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 94.32 | |
| PLN02811 | 220 | hydrolase | 94.24 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 93.92 | |
| PLN02151 | 354 | trehalose-phosphatase | 93.7 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 93.53 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 93.42 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.4 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 93.36 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.51 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.37 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 92.24 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 92.13 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 92.06 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 91.94 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 91.93 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 91.79 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.61 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 91.5 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 89.06 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 88.86 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 87.69 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 87.63 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 87.41 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 86.91 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 86.55 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 86.36 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 86.0 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 85.82 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 85.66 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 85.56 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 85.43 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 85.17 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 84.32 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 80.43 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-200 Score=1800.01 Aligned_cols=1015 Identities=54% Similarity=0.920 Sum_probs=935.6
Q ss_pred CCCc-eEEEeCCCCCC--CCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccCcccCcccchhhHHH
Q 001335 39 APNF-RTIYCNDREAN--QPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSL 115 (1097)
Q Consensus 39 ~~~~-r~~~~n~~~~~--~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~ 115 (1097)
.+++ |+|++|+|..+ +..+|..|+|+|+||++++|+|++|||||+|++|+|||++++|+++|++|++++++++||++
T Consensus 10 ~~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~ 89 (1151)
T KOG0206|consen 10 RPGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLF 89 (1151)
T ss_pred cCCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceee
Confidence 3455 99999998533 55799999999999999999999999999999999999999999999899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhchhhhcCceEEEeeCCe-EEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEcc
Q 001335 116 VLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQR-WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETA 194 (1097)
Q Consensus 116 vl~is~~~~~~ed~~r~k~~~~~n~~~~~V~r~g~-~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes 194 (1097)
|+.++++||++|||+|+++|+++|+++++|++++. +++..|++|+|||+|++..+|.+|||++||++|+++|+|||+|+
T Consensus 90 vl~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~ 169 (1151)
T KOG0206|consen 90 VLGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETA 169 (1151)
T ss_pred eehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEe
Confidence 99999999999999999999999999999999643 99999999999999999999999999999999999999999999
Q ss_pred ccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEE
Q 001335 195 NLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAV 274 (1097)
Q Consensus 195 ~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvV 274 (1097)
|||||||+|.|++++.+........+..+++.|+||+||+++|.|.|++..++...|++++|+++|||+|+||+|++|+|
T Consensus 170 nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~v 249 (1151)
T KOG0206|consen 170 NLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVV 249 (1151)
T ss_pred ecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEE
Confidence 99999999999999988775566778899999999999999999999999888777999999999999999999999999
Q ss_pred EEecCccceeeccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc------cccccccCCCCCccCCCC
Q 001335 275 IFAGHETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKK------HYYLGLHNMGNSVEDDQF 348 (1097)
Q Consensus 275 v~tG~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~------~~yl~~~~~~~~~~~~~~ 348 (1097)
++||+|||+|+|+.+++.|+|++++.+|+.+..++++++++|++++++.++|.... .||+...
T Consensus 250 v~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----------- 318 (1151)
T KOG0206|consen 250 VFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPS----------- 318 (1151)
T ss_pred EEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCc-----------
Confidence 99999999999999999999999999999999999999999999999999988732 4565432
Q ss_pred CCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecC
Q 001335 349 NPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDK 428 (1097)
Q Consensus 349 ~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DK 428 (1097)
+.....+..|+++++++..++|+|||+++|+++.+| +.+|++|.+||++++++++.+|+++++|+||||++|++||
T Consensus 319 ---~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~q-s~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDK 394 (1151)
T KOG0206|consen 319 ---EAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQ-SIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDK 394 (1151)
T ss_pred ---hHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHH-HHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcC
Confidence 144567889999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred CCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHH
Q 001335 429 TGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFF 508 (1097)
Q Consensus 429 TGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 508 (1097)
|||||+|.|+|++|+++|..|+...++.+....++.+.. ... +..+++.|.|++++++.+...+++...++|+
T Consensus 395 TGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~------~~~-~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~ 467 (1151)
T KOG0206|consen 395 TGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGD------VNE-HKIKGFTFEDSRLVDGLWSSEPQAEDILEFF 467 (1151)
T ss_pred cCccccceeeeecccccCcccccCCChhhcccCcccccc------ccc-cccccceeccchhhccccccccCcchHHHHh
Confidence 999999999999999999999998876654443332222 012 4557889999999999998888888999999
Q ss_pred HHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCC
Q 001335 509 RCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNST 588 (1097)
Q Consensus 509 ~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~ 588 (1097)
+++|+||+++++.+++.+.+.|+++||||.|++++|+++|+.+..|+++.+.+...+ ..++|++|+++||+|.
T Consensus 468 ~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g-------~~~~y~lL~iLeF~S~ 540 (1151)
T KOG0206|consen 468 RALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELG-------VEETYELLNVLEFNST 540 (1151)
T ss_pred hHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccc-------cceeEEEEEEeccccc
Confidence 999999999999877667899999999999999999999999999999999998443 3679999999999999
Q ss_pred CceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHh
Q 001335 589 RKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKS 668 (1097)
Q Consensus 589 rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~ 668 (1097)
|||||||||+++|++.|||||||++|++|++..+....+.+.+|+++||.+||||||+|||+++++||..|+++|.+|++
T Consensus 541 RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~t 620 (1151)
T KOG0206|consen 541 RKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKT 620 (1151)
T ss_pred cceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998888899999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEE
Q 001335 669 SLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFII 748 (1097)
Q Consensus 669 ~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i 748 (1097)
++.||+++++++++.+|+||+++|+|||||+||+||||+|+.|++||||+||+|||+.|||++||++|+++++++.++.+
T Consensus 621 s~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i 700 (1151)
T KOG0206|consen 621 SLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIII 700 (1151)
T ss_pred hccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCc
Q 001335 749 TSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSS 828 (1097)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~ 828 (1097)
+..+.+ ..+..+... .+.+.+..+..+........ ......+++|||+++.++++++.+.+|..++..|++
T Consensus 701 ~~~~~~-----~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~---~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~s 771 (1151)
T KOG0206|consen 701 NTETSE-----ELSSLDATA-ALKETLLRKFTEELEEAKLE---HSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKS 771 (1151)
T ss_pred ecCChh-----hhcchhhHH-HHHHHHHHhhhHHHHHHhhc---cCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCE
Confidence 887644 111111111 33344444443333322211 111479999999999999999888999999999999
Q ss_pred eEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhHHHHHHhhhhh
Q 001335 829 VVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRW 908 (1097)
Q Consensus 829 vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l~~lll~~Gr~ 908 (1097)
|+|||+||.||+.+|+.+++..+.+|+|||||+||++|||+|||||||+|.||+||.++|||++.+|+||.+||++||||
T Consensus 772 ViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW 851 (1151)
T KOG0206|consen 772 VICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHW 851 (1151)
T ss_pred EEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecce
Confidence 99999999999999999997789999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhhc
Q 001335 909 SYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEG 988 (1097)
Q Consensus 909 ~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~ 988 (1097)
+|.|++++++|+||||+++++++|||++++||||+++|++|++.+||++||++|++++|++|||++++.++++|+||+.|
T Consensus 852 ~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g 931 (1151)
T KOG0206|consen 852 SYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRG 931 (1151)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHhhh-hcCCCccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Q 001335 989 IKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYIT 1067 (1097)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~if~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 1067 (1097)
+++..|+|++|+.|++.|+++++++||+++ .+.......+|++.|++.+|+++|+++|+++|+++++.+++|||++|++
T Consensus 932 ~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~ 1011 (1151)
T KOG0206|consen 932 QLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWTWINHIV 1011 (1151)
T ss_pred hhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehheeHHHHHH
Confidence 999999999999999999999999999999 6655577889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCC
Q 001335 1068 VGGSILAWFLFVFLYTGIMTPNDR 1091 (1097)
Q Consensus 1068 ~~~si~~~~~~~~~~~~~~~~~~~ 1091 (1097)
+|+|+++||+++++|...++....
T Consensus 1012 i~gSi~~~f~f~~iy~~~~~~~~~ 1035 (1151)
T KOG0206|consen 1012 IWGSILLWFVFLFIYSELTPAIST 1035 (1151)
T ss_pred HHHHHHHHHHHHHHHhccccccCC
Confidence 999999999999999975555544
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-178 Score=1680.12 Aligned_cols=1011 Identities=38% Similarity=0.648 Sum_probs=864.8
Q ss_pred CceEEEeCCCCC-CCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhcccc-CcccCcccchhhHHHHHH
Q 001335 41 NFRTIYCNDREA-NQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP-MSPVNPVTNVVPLSLVLL 118 (1097)
Q Consensus 41 ~~r~~~~n~~~~-~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~~~~~~~~~~~l~~vl~ 118 (1097)
+.|.|++|++.. +.+.+|++|+|+|+||++|+|+|++||+||+|++|+|||+++|+|++| +++.+++++++||+++++
T Consensus 69 ~~r~i~~~~~~~~~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~ 148 (1178)
T PLN03190 69 DARLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLL 148 (1178)
T ss_pred CceEEEcCCCCcccccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHH
Confidence 349999999853 445579999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHHHhhchhhhcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCC
Q 001335 119 VSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDG 198 (1097)
Q Consensus 119 is~~~~~~ed~~r~k~~~~~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtG 198 (1097)
++++++++||++|+|+|+++|+++++|+|+|++++++|++|+|||||+|++||.+|||++||++++++|.|+|||++|||
T Consensus 149 v~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdG 228 (1178)
T PLN03190 149 VTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDG 228 (1178)
T ss_pred HHHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEec
Q 001335 199 ETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAG 278 (1097)
Q Consensus 199 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG 278 (1097)
||+||.|.+.+.+.... .....++|.|+||.||++++.|.|++.++|+..+++.+|+++|||.|+||+|++|+|+|||
T Consensus 229 Et~~k~k~~~~~~~~~~--~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG 306 (1178)
T PLN03190 229 ESNLKTRYAKQETLSKI--PEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCG 306 (1178)
T ss_pred eeeeeEecccchhhhcc--hhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEec
Confidence 99999999887654211 2235678999999999999999999999999999999999999999999999999999999
Q ss_pred CccceeeccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc---cccccccccCCCC-Cc-cCCCCCCChh
Q 001335 279 HETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFID---KKHYYLGLHNMGN-SV-EDDQFNPDKR 353 (1097)
Q Consensus 279 ~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~---~~~~yl~~~~~~~-~~-~~~~~~~~~~ 353 (1097)
+|||+++|..+++.|+|++|+++|+++.+++++++++|++++++..+|.. .+.||+....... +. ....++....
T Consensus 307 ~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 386 (1178)
T PLN03190 307 RETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGW 386 (1178)
T ss_pred hhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchh
Confidence 99999999999999999999999999999999999999999888777653 2245543221000 00 0000111111
Q ss_pred HHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCcee
Q 001335 354 FLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLT 433 (1097)
Q Consensus 354 ~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT 433 (1097)
....+..|+++++++..+||+||++++|+++++| +++|++|.+||+++.++++.||+++++|+||+|+|||+|||||||
T Consensus 387 ~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~q-a~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT 465 (1178)
T PLN03190 387 GWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQ-AYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLT 465 (1178)
T ss_pred hHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHH-HHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccc
Confidence 1334677888999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred ecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccC--CCCChhHHHHHHHHh
Q 001335 434 RNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWR--NEHNPDACKEFFRCL 511 (1097)
Q Consensus 434 ~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~l 511 (1097)
+|+|+|++|+++|..|+.+....+..... ..... ++.... .......++.+...... ..+....+.+|++++
T Consensus 466 ~N~M~fk~~~i~g~~y~~~~~~~~~~~~~-~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~l 539 (1178)
T PLN03190 466 ENKMEFQCASIWGVDYSDGRTPTQNDHAG-YSVEV---DGKILR--PKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLAL 539 (1178)
T ss_pred cceEEEEEEEECCEEcccccccchhhhhc-ccccc---cccccc--ccccccCCHHHHhhhhccccchhhHHHHHHHHHH
Confidence 99999999999999998542211110000 00000 000000 00001123333322111 112234578899999
Q ss_pred hcccceEeccCCC--C---CceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCC
Q 001335 512 AICHTVLPEGDES--P---ERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFN 586 (1097)
Q Consensus 512 alc~~~~~~~~~~--~---~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~ 586 (1097)
|+||++.++..++ . +.+.|+++||||.||+++|+++|+.+..|+++.+.+...+ ....|++++++||+
T Consensus 540 alChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~-------~~~~~~il~~~pF~ 612 (1178)
T PLN03190 540 AACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHG-------ERQRFNVLGLHEFD 612 (1178)
T ss_pred HhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeecc-------ceecceeEEEeccc
Confidence 9999999853211 1 2468999999999999999999999999999999887653 26789999999999
Q ss_pred CCCceEEEEEEecCCcEEEEEecchhHHHHHhhcC-chhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHH
Q 001335 587 STRKRQSVVCRYADGRLVLYCKGADSVIYERLANG-NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQ 665 (1097)
Q Consensus 587 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~ 665 (1097)
|+|||||||++++++++++||||||++|+++|+.. +.+.++.+.+++++|+++|+||||+|||+++++|+++|.++|.+
T Consensus 613 S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~ 692 (1178)
T PLN03190 613 SDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEA 692 (1178)
T ss_pred ccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHH
Confidence 99999999999988899999999999999999764 33467788999999999999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeE
Q 001335 666 AKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQ 745 (1097)
Q Consensus 666 a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~ 745 (1097)
|+.++.+|+++++++.+++|+||+++|+++++|++|++++++|+.|++|||++||+|||+.+||++||++|||+++++..
T Consensus 693 a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~ 772 (1178)
T PLN03190 693 ASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQ 772 (1178)
T ss_pred hhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred EEEecCCccchhcccCCChHHHHHHhHHHHHH--HHHH---HHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHH
Q 001335 746 FIITSETNAIRDVEERGDPVEIARFMREEVKR--ELNK---CIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILL 820 (1097)
Q Consensus 746 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~ 820 (1097)
+.++.+..+. ....+.+.... .... ..+... ........+.+++++|.++..++++++++.|.
T Consensus 773 i~i~~~~~~~-----------~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~ 840 (1178)
T PLN03190 773 IIINSNSKES-----------CRKSLEDALVMSKKLTTVSGISQNTG-GSSAAASDPVALIIDGTSLVYVLDSELEEQLF 840 (1178)
T ss_pred EEecCCchhh-----------HHHHHHHHhhhhhhcccccccccccc-ccccccCCceEEEEEcHHHHHHhhhHHHHHHH
Confidence 8776543210 00111110000 0000 000000 00011235678999999999999888889999
Q ss_pred hhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhHHH
Q 001335 821 NLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTD 900 (1097)
Q Consensus 821 ~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l~~ 900 (1097)
+++..|++|||||++|+||+++|+.+|+..+++|+|||||+||++|||+||||||++|+||.||+++|||+|.+|++|.+
T Consensus 841 ~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~r 920 (1178)
T PLN03190 841 QLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVP 920 (1178)
T ss_pred HHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHH
Confidence 99999999999999999999999999985568999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhc
Q 001335 901 LLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKK 980 (1097)
Q Consensus 901 lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~ 980 (1097)
||++||||+|+|++++++|+||||+++++++|||+++++|||+++|++|.+++||++||++|++++|++|+|++++.+++
T Consensus 921 LLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~ 1000 (1178)
T PLN03190 921 LLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLK 1000 (1178)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhhcccccccCHHHHHHHHHHHHHHHHHHHHhhh-hcCCCccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhccc
Q 001335 981 YPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNT 1059 (1097)
Q Consensus 981 ~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 1059 (1097)
+|+||+.++++..++.+.|+.|++.|+|||+++||+++ .+.... .+| +.++.++++++++++|+++++.+++
T Consensus 1001 ~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~~--~~~-----~~~~~~~~~~~v~~vnl~i~~~~~~ 1073 (1178)
T PLN03190 1001 YPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWAST--IDG-----SSIGDLWTLAVVILVNLHLAMDIIR 1073 (1178)
T ss_pred CcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--cCc-----eeEhHhhhhHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999987 443321 223 3457788889999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhccC
Q 001335 1060 ITRFHYITVGGSILAWFLFVFLYTGIM 1086 (1097)
Q Consensus 1060 ~~~~~~~~~~~si~~~~~~~~~~~~~~ 1086 (1097)
|+|++++++|+|+++|+++.++|+.+|
T Consensus 1074 wt~~~~~~i~~Si~~~~i~~~~~~~~~ 1100 (1178)
T PLN03190 1074 WNWITHAAIWGSIVATFICVIVIDAIP 1100 (1178)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999998876
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-166 Score=1585.93 Aligned_cols=996 Identities=55% Similarity=0.902 Sum_probs=872.2
Q ss_pred CCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhcccc-CcccCcccchhhHHHHHHHHHHHHHHHHHHHhhchh
Q 001335 58 FKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP-MSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDM 136 (1097)
Q Consensus 58 ~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~~~~~~~~~~~l~~vl~is~~~~~~ed~~r~k~~~ 136 (1097)
|++|+|+|+||++|+|+|++||+||+|++|+|||+++++|++| +++.+++++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7899999999999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred hhcCceEEEeeC-CeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeecccccccCCC
Q 001335 137 TINSTPVEVLQG-QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYL 215 (1097)
Q Consensus 137 ~~n~~~~~V~r~-g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~~~~~~~~ 215 (1097)
++|+++++|+|+ |++++++|+||+|||||+|++||.+|||++||++++++|.|+||||+|||||+||.|++.+.+....
T Consensus 81 ~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~ 160 (1057)
T TIGR01652 81 EVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKML 160 (1057)
T ss_pred HHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccC
Confidence 999999999997 8999999999999999999999999999999999999999999999999999999999987765555
Q ss_pred ChhhhccceEEEEEecCCCCceeeEEEEEEcC-ccccCCCCCeeecccEEecCCeEEEEEEEecCccceeeccCCCCCcc
Q 001335 216 TPEKASEFKGEVQCEQPNNSLYTFTGNLIMQK-QTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSMNIPSKR 294 (1097)
Q Consensus 216 ~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g-~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~~~~~~~~k~ 294 (1097)
....+.+++|.|+||.||++++.|+|++.+++ ...|++.+|+++|||.++||+|++|+|+|||++||+++|...++.|+
T Consensus 161 ~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k~ 240 (1057)
T TIGR01652 161 DEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240 (1057)
T ss_pred ChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCcccc
Confidence 55667788999999999999999999999988 77899999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc---ccccccccCCCCCccCCCCCCChhHHHHHHHHHHHHHHhcCc
Q 001335 295 STLERKLDKLILALFATLTVMCLICAIGSAIFIDK---KHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPI 371 (1097)
Q Consensus 295 s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~---~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~ 371 (1097)
|++|+++|+++.+++.+++++|++++++..+|... ..||+..+. +..+....++..|++++++++.+
T Consensus 241 s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~----------~~~~~~~~~~~~~~~~~~L~~~~ 310 (1057)
T TIGR01652 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDV----------SERNAAANGFFSFLTFLILFSSL 310 (1057)
T ss_pred cHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCc----------ccccchhHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999998877666542 268875432 01222344667899999999999
Q ss_pred ccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEEEEEcceeccC
Q 001335 372 IPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGT 451 (1097)
Q Consensus 372 iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~ 451 (1097)
||++||+++++++++| +.+|++|.+|++++.++++.+|+++++|+||+|++||+|||||||+|+|+|++|+++|..|+.
T Consensus 311 IPisL~v~l~l~~~~~-~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~ 389 (1057)
T TIGR01652 311 IPISLYVSLELVKSVQ-AYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGD 389 (1057)
T ss_pred cceeeeehHHHHHHHH-HHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecC
Confidence 9999999999999999 999999999998888889999999999999999999999999999999999999999999986
Q ss_pred CchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEecc-CCCCCceEE
Q 001335 452 GITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEG-DESPERITY 530 (1097)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~-~~~~~~~~y 530 (1097)
+.++.........+...+.. .. .....+..++.++.+.+.....++..+...++++++++||++.++. +++++.+.|
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y 467 (1057)
T TIGR01652 390 GFTEIKDAIRERLGSYVENE-NS-MLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITY 467 (1057)
T ss_pred CcchHHHHhhhccccccccc-cc-ccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEE
Confidence 54432222111111000000 00 0001122345566655443333344456788999999999999875 333345889
Q ss_pred ecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEEEecc
Q 001335 531 QAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGA 610 (1097)
Q Consensus 531 ~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa 610 (1097)
+++||+|.||+++|+.+|+.+.+|+++.+.+..... | ....|++++++||+|+||||||+++++++++++|+|||
T Consensus 468 ~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~---~--~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA 542 (1057)
T TIGR01652 468 QAASPDEAALVKAARDVGFVFFERTPKSISLLIEMH---G--ETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGA 542 (1057)
T ss_pred EccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeC---C--CEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCc
Confidence 999999999999999999999999988544332211 1 25789999999999999999999999888999999999
Q ss_pred hhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceE
Q 001335 611 DSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTL 690 (1097)
Q Consensus 611 ~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~l 690 (1097)
|++|+++|...+++.++.+.+++++|+.+|+|||++|||+++++|+.+|.++|++|+.++.+|++.+++.++++|+||+|
T Consensus 543 ~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~ 622 (1057)
T TIGR01652 543 DTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLIL 622 (1057)
T ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEE
Confidence 99999999875556778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHH
Q 001335 691 IGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARF 770 (1097)
Q Consensus 691 lG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 770 (1097)
+|++|+|||||++|+++|+.|++||||+||+|||+++||++||++||+++++...+.++.++.+.. ...
T Consensus 623 lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~--------~~~--- 691 (1057)
T TIGR01652 623 LGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDAT--------RSV--- 691 (1057)
T ss_pred EEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhh--------HHH---
Confidence 999999999999999999999999999999999999999999999999998887777766542110 000
Q ss_pred hHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHccc
Q 001335 771 MREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA 850 (1097)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~ 850 (1097)
.+.+..+......+.. ......+++++++|+++..+++++++++|.+++..|+++||||++|+||+++|+.+|+..
T Consensus 692 -~~~i~~~~~~~~~~~~---~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~ 767 (1057)
T TIGR01652 692 -EAAIKFGLEGTSEEFN---NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKST 767 (1057)
T ss_pred -HHHHHHHHHHHHHhhh---hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcC
Confidence 1111111111111111 011245678999999999999888888999999999999999999999999999999844
Q ss_pred CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhHHHHHHhhhhhhHHHHhHHHHHHHHHHHHHHHH
Q 001335 851 RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLT 930 (1097)
Q Consensus 851 ~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~ 930 (1097)
|++|+|||||+||++||++||||||++|+|+.||+++|||++.+|++|.+++++|||++|+|+++++.|.||||++++++
T Consensus 768 ~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~ 847 (1057)
T TIGR01652 768 GKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAII 847 (1057)
T ss_pred CCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999989999999999999999999999999999
Q ss_pred HHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhhcccccccCHHHHHHHHHHHHHHH
Q 001335 931 QFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQS 1010 (1097)
Q Consensus 931 ~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1097)
+|+|.++++|+|+++|++|++++||+++|++|++++|++|+|++++.++++|++|+.++++..++.+.|+.|++.|++|+
T Consensus 848 ~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~ 927 (1057)
T TIGR01652 848 QFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQS 927 (1057)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh-hcCCCccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHhccC
Q 001335 1011 LVLYNCVT-TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWFLFVFLYTGIM 1086 (1097)
Q Consensus 1011 ~~if~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~~~~~~~~~~ 1086 (1097)
+++|++.+ .+.......+|.+.+++.+|+++|+++++++|+++++.+++|+|++++++|+|+++|+++.++|+.++
T Consensus 928 ~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~ 1004 (1057)
T TIGR01652 928 LVIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIF 1004 (1057)
T ss_pred HHHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99998888 55544444689999999999999999999999999999999999999999999999999999998655
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-147 Score=1215.96 Aligned_cols=934 Identities=33% Similarity=0.517 Sum_probs=819.2
Q ss_pred eEEEeCCCCCCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhcccc-CcccCcccchhhHHHHHHHHH
Q 001335 43 RTIYCNDREANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP-MSPVNPVTNVVPLSLVLLVSL 121 (1097)
Q Consensus 43 r~~~~n~~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~~~~~~~~~~~l~~vl~is~ 121 (1097)
|++.+......++.+|++|.++..||++++|+|..+++||+-+.|+|||+.++.|++| +......+++.|+.||+++++
T Consensus 64 rt~~~~~~~~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl 143 (1051)
T KOG0210|consen 64 RTVNISFGPHYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITL 143 (1051)
T ss_pred ceeecccCCCcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHH
Confidence 6666655555677899999999999999999999999999999999999999999999 555567789999999999999
Q ss_pred HHHHHHHHHHhhchhhhcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCccc
Q 001335 122 IKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETN 201 (1097)
Q Consensus 122 ~~~~~ed~~r~k~~~~~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~ 201 (1097)
+||+++|++|++.|++.|+.+.+++........++++|+|||+|.+.+|++||||++||.+|+.+|.|+|-|..|||||+
T Consensus 144 ~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETD 223 (1051)
T KOG0210|consen 144 IKEAVDDLKRRRRDRELNSEKYTKLTRDGTRREPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETD 223 (1051)
T ss_pred HHHHHHHHHHHHhhhhhhhhhheeeccCCcccccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccc
Confidence 99999999999999999999999984433444499999999999999999999999999999999999999999999999
Q ss_pred ceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcC--ccccCCCCCeeecccEEecCCeEEEEEEEecC
Q 001335 202 LKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQK--QTLPLNPNQILLRGCSLRNTEYIIGAVIFAGH 279 (1097)
Q Consensus 202 ~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g--~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~ 279 (1097)
.|.|-|++.++++..+..+.+++ |..|.|+++++.|-|++.+.. +..+|+.+|+++.++.+.+.+ ++|+|+|||.
T Consensus 224 WKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t-~~gvVvYTG~ 300 (1051)
T KOG0210|consen 224 WKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGT-AIGVVVYTGR 300 (1051)
T ss_pred ceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCc-EEEEEEEecc
Confidence 99999999999998888877776 899999999999999999943 357899999999999998855 9999999999
Q ss_pred ccceeeccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHH
Q 001335 280 ETKVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVL 359 (1097)
Q Consensus 280 ~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (1097)
||+-++|.+.++.|-..++..+|.+.+++++++++++++....-++ ...|| .
T Consensus 301 dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~---~~~wy-------------------------i 352 (1051)
T KOG0210|consen 301 DTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF---GSDWY-------------------------I 352 (1051)
T ss_pred cHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC---CCchH-------------------------H
Confidence 9999999999999999999999999999999998888776443332 23455 3
Q ss_pred HHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEE
Q 001335 360 NMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEF 439 (1097)
Q Consensus 360 ~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~ 439 (1097)
.+++++.+++.+||++|.+.+++++.+. +..|.+|.++ .+..+|++++.|+||+|.++.+|||||||+|.|+|
T Consensus 353 ~~~RfllLFS~IIPISLRvnlDmaK~~y-s~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~ 425 (1051)
T KOG0210|consen 353 YIIRFLLLFSSIIPISLRVNLDMAKIVY-SWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEF 425 (1051)
T ss_pred HHHHHHHHHhhhceeEEEEehhHHHhhH-hhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccchhee
Confidence 6889999999999999999999999999 9999998866 67899999999999999999999999999999999
Q ss_pred EEEEEcceeccCCc-hhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceE
Q 001335 440 FKCSIGGEIYGTGI-TEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVL 518 (1097)
Q Consensus 440 ~~~~i~~~~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~ 518 (1097)
++++.|-..|+.+. ++++.....-.+.. +. ..++. ....+.+.....++..+++|+||++.
T Consensus 426 KKiHLGTv~~s~e~~~eV~~~i~s~~~~~--~~-------~~~~~---------~~~~k~~~s~rv~~~V~alalCHNVT 487 (1051)
T KOG0210|consen 426 KKIHLGTVAYSAETMDEVSQHIQSLYTPG--RN-------KGKGA---------LSRVKKDMSARVRNAVLALALCHNVT 487 (1051)
T ss_pred eeeeeeeeeccHhHHHHHHHHHHHhhCCC--cc-------ccccc---------chhhcCcccHHHHHHHHHHHHhccCC
Confidence 99999999988643 22222221111100 00 00000 01122344557889999999999999
Q ss_pred eccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEe
Q 001335 519 PEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRY 598 (1097)
Q Consensus 519 ~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~ 598 (1097)
|..++ +|...||+.||||.||+++....|..+..|+.+.+.++.+.. ....|+||.++||+|+.|||++|||+
T Consensus 488 Pv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~------~~~~yqIL~vFPFtsEtKRMGIIVr~ 560 (1051)
T KOG0210|consen 488 PVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLD------DELNYQILQVFPFTSETKRMGIIVRD 560 (1051)
T ss_pred cccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCC------cceeEEEEEEeccccccceeeEEEec
Confidence 98765 568999999999999999999999999999999999986632 36899999999999999999999998
Q ss_pred c-CCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHH
Q 001335 599 A-DGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKL 677 (1097)
Q Consensus 599 ~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~ 677 (1097)
+ ++++.+|.||||.+|...... .+++++...++|++|||||++|+|.|+++||+.|.+.|+.|+.++.||++++
T Consensus 561 e~~~evtfylKGAD~VMs~iVq~-----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~m 635 (1051)
T KOG0210|consen 561 ETTEEVTFYLKGADVVMSGIVQY-----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKM 635 (1051)
T ss_pred CCCceEEEEEecchHHHhccccc-----chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHH
Confidence 6 789999999999999776554 3478888999999999999999999999999999999999999999999999
Q ss_pred HHHHH-HHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccch
Q 001335 678 DEVAE-LIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIR 756 (1097)
Q Consensus 678 ~~~~~-~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~ 756 (1097)
.++.+ .+|+||+++|++|+||+||++|+.+++.||+||||+||+|||+.|||+.||++.+++..+...-++..-...
T Consensus 636 a~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr-- 713 (1051)
T KOG0210|consen 636 ANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSR-- 713 (1051)
T ss_pred HHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCc--
Confidence 99887 899999999999999999999999999999999999999999999999999999999988776666543321
Q ss_pred hcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCc
Q 001335 757 DVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSP 836 (1097)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP 836 (1097)
.+...+ ++.+ -...+.+++|+|+++...++ .+++.|.++.+.|.++||||++|
T Consensus 714 ----------------~dah~e----L~~l------R~k~~~aLvi~G~Sl~~cl~-yye~Ef~el~~~~~aVv~CRctP 766 (1051)
T KOG0210|consen 714 ----------------GDAHNE----LNNL------RRKTDCALVIDGESLEFCLK-YYEDEFIELVCELPAVVCCRCTP 766 (1051)
T ss_pred ----------------hHHHHH----HHHh------hcCCCcEEEEcCchHHHHHH-HHHHHHHHHHHhcCcEEEEecCh
Confidence 001111 1111 13467789999999987664 67888999999999999999999
Q ss_pred ccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhHHHHHHhhhhhhHHHHhHH
Q 001335 837 LQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKV 916 (1097)
Q Consensus 837 ~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l~~lll~~Gr~~~~~i~~~ 916 (1097)
.||+++++.+|++.++.|++||||.||++|||+||+|||+-|+||.||..||||.|.+|.++.+||++|||.+|.|.++.
T Consensus 767 tQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~l 846 (1051)
T KOG0210|consen 767 TQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYKRSAKL 846 (1051)
T ss_pred hHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHhhccccchHHHHHHH
Confidence 99999999999988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhhcccccccCH
Q 001335 917 VLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTW 996 (1097)
Q Consensus 917 i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~ 996 (1097)
.+|.+.+++++..++..|+....|...++|..+.|..|..++|.+|++.+ +.|+|++++..+.+|+||+.-.+++.++.
T Consensus 847 aqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSl-v~d~Dv~~~~a~~yPELYKeL~kgr~lSY 925 (1051)
T KOG0210|consen 847 AQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSL-VLDRDVSESLAVLYPELYKELTKGRSLSY 925 (1051)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhhee-eecccccHHHHhhhHHHHHHHhcCCccch
Confidence 99999999999999999999999999999999999999999999999999 67999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCCccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 001335 997 RVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTITRFHYITVGGSILAWF 1076 (1097)
Q Consensus 997 ~~~~~~~~~~~~~~~~if~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~si~~~~ 1076 (1097)
|.|+.|++.++||+.++.++.+..+... +....++.|+++++.-.+.+++..++|+|...+.-+.|+.+|+
T Consensus 926 KtF~iwvLISiYQG~vim~g~~~l~~~e---------f~~ivaisFtaLi~tELiMVaLtv~tw~~~m~vae~lsL~~Yi 996 (1051)
T KOG0210|consen 926 KTFFIWVLISIYQGSVIMYGALLLFDTE---------FIHIVAISFTALILTELIMVALTVRTWHWLMVVAELLSLALYI 996 (1051)
T ss_pred hhhhhhhhHHHHcccHHHHHHHHHhhhh---------heEeeeeeeHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999876333332 2245677888888888888899999999988888888888777
Q ss_pred HHHHHHh
Q 001335 1077 LFVFLYT 1083 (1097)
Q Consensus 1077 ~~~~~~~ 1083 (1097)
+.+.+..
T Consensus 997 vsl~~l~ 1003 (1051)
T KOG0210|consen 997 VSLAFLH 1003 (1051)
T ss_pred HHHHHHH
Confidence 7665543
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-115 Score=1092.39 Aligned_cols=802 Identities=29% Similarity=0.398 Sum_probs=646.0
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhcccc--CcccCcccchhhHHHHHHHHHHHHHHHHH
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP--MSPVNPVTNVVPLSLVLLVSLIKEAWEDW 129 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~--~~~~~~~~~~~~l~~vl~is~~~~~~ed~ 129 (1097)
..|+..||.|++...+...+. +.++.||.+++++.++++++++++. +.+.. .....++++++++++...++++
T Consensus 51 ~~r~~~~G~N~~~~~~~~~~~---~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~--~~~~~I~~~i~~n~~~g~~qe~ 125 (917)
T COG0474 51 KRRLKKYGPNELPEEKKRSLL---KKFLRQFKDPFIILLLVAALLSAFVGDWVDAG--VDAIVILLVVVINALLGFVQEY 125 (917)
T ss_pred HHHHhhcCCccccccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--cceeeehHHHHHHHHHHHHHHH
Confidence 346788999999976654432 8899999999999999999998874 22211 1122233445555555677777
Q ss_pred HHhh---chhhhcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeec
Q 001335 130 KRFQ---NDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRK 206 (1097)
Q Consensus 130 ~r~k---~~~~~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~ 206 (1097)
+..+ +++++.+.+++|+|||++++++|++|+|||||+|+.||.||||++||++++ .+||||+|||||+|+.|.
T Consensus 126 ~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K~ 201 (917)
T COG0474 126 RAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEKQ 201 (917)
T ss_pred HHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhcc
Confidence 7754 566777899999999999999999999999999999999999999999996 499999999999999999
Q ss_pred ccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceeec
Q 001335 207 ALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMN 286 (1097)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~~ 286 (1097)
+..... .|.|. .++..|++++||.++++ .+.|+|++||++|+++++
T Consensus 202 ~~~~~~----------------~~~~~-----------------~~d~~n~l~sGt~V~~G-~~~giVvaTG~~T~~G~i 247 (917)
T COG0474 202 ALPLTK----------------SDAPL-----------------GLDRDNMLFSGTTVVSG-RAKGIVVATGFETEFGKI 247 (917)
T ss_pred cccccc----------------ccccc-----------------cCCccceEEeCCEEEcc-eEEEEEEEEcCccHHHHH
Confidence 875331 01111 14678999999999984 499999999999998887
Q ss_pred cCCCC---CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHHHH
Q 001335 287 SMNIP---SKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFT 363 (1097)
Q Consensus 287 ~~~~~---~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (1097)
....+ .+.+++++.++++..+++.+.++++++.++...+ .... .+...|+.
T Consensus 248 a~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~-~~~~-------------------------~~~~~~~~ 301 (917)
T COG0474 248 ARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF-RGGN-------------------------GLLESFLT 301 (917)
T ss_pred HHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCc-------------------------cHHHHHHH
Confidence 75422 5689999999999999999999888888776522 2111 14678999
Q ss_pred HHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEEEE
Q 001335 364 LITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCS 443 (1097)
Q Consensus 364 ~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~ 443 (1097)
++++++.+||++||+.++++++++ +.+| +++++++|+++++|+||++|+||||||||||+|+|+|++|+
T Consensus 302 ~v~l~va~IPegLp~~vti~la~g-~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~ 370 (917)
T COG0474 302 ALALAVAAVPEGLPAVVTIALALG-AQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIY 370 (917)
T ss_pred HHHHHHhccccchHHHHHHHHHHH-HHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEE
Confidence 999999999999999999999999 9887 88899999999999999999999999999999999999999
Q ss_pred EcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEeccCC
Q 001335 444 IGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDE 523 (1097)
Q Consensus 444 i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~ 523 (1097)
+++. +.+.++ ......+...+++.++++||++.+..+
T Consensus 371 ~~~~--~~~~~~----------------------------------------~~~~~~~~~~~~l~~~~lc~~~~~~~~- 407 (917)
T COG0474 371 INGG--GKDIDD----------------------------------------KDLKDSPALLRFLLAAALCNSVTPEKN- 407 (917)
T ss_pred eCCC--cccccc----------------------------------------cccccchHHHHHHHHHHhcCccccccc-
Confidence 8851 000000 000122234578999999999988654
Q ss_pred CCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCcE
Q 001335 524 SPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRL 603 (1097)
Q Consensus 524 ~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~ 603 (1097)
. .|..+||+|.||++++.+.|+.+ . ... ....+++++.+||||+||||||+++..++++
T Consensus 408 ~----~~~~gdptE~Al~~~a~~~~~~~-~--~~~--------------~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~ 466 (917)
T COG0474 408 G----WYQAGDPTEGALVEFAEKLGFSL-D--LSG--------------LEVEYPILAEIPFDSERKRMSVIVKTDEGKY 466 (917)
T ss_pred C----ceecCCccHHHHHHHHHhcCCcC-C--HHH--------------HhhhcceeEEecCCCCceEEEEEEEcCCCcE
Confidence 2 56789999999999999999744 1 100 2456789999999999999999999777789
Q ss_pred EEEEecchhHHHHHhhc------CchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHH
Q 001335 604 VLYCKGADSVIYERLAN------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKL 677 (1097)
Q Consensus 604 ~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~ 677 (1097)
+++||||||+|+++|+. ..++.++.+.+..++|+++|||||++|||.+++++..
T Consensus 467 ~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~-------------------- 526 (917)
T COG0474 467 ILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKD-------------------- 526 (917)
T ss_pred EEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccc--------------------
Confidence 99999999999999985 2345678899999999999999999999987665421
Q ss_pred HHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchh
Q 001335 678 DEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRD 757 (1097)
Q Consensus 678 ~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~ 757 (1097)
+.. +.+|+||+|+|+++|+||||++++++|+.|++||||+||+||||++||++||++||+..+..
T Consensus 527 ~~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~-------------- 591 (917)
T COG0474 527 DEV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE-------------- 591 (917)
T ss_pred chh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCC--------------
Confidence 111 67899999999999999999999999999999999999999999999999999999854321
Q ss_pred cccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcc
Q 001335 758 VEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPL 837 (1097)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~ 837 (1097)
. .++++|.++..+.++++.+...+. + ||||+||+
T Consensus 592 --------------------------------------~--~~vi~G~el~~l~~~el~~~~~~~----~--VfARvsP~ 625 (917)
T COG0474 592 --------------------------------------S--ALVIDGAELDALSDEELAELVEEL----S--VFARVSPE 625 (917)
T ss_pred --------------------------------------c--eeEeehHHhhhcCHHHHHHHhhhC----c--EEEEcCHH
Confidence 0 468999999888877655555543 3 99999999
Q ss_pred cHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecC--ccchhhhhhcceeccchHh-HHHHHHhhhhhhHHHHh
Q 001335 838 QKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISG--QEGMQAVMASDFAIAQFRF-LTDLLLVHGRWSYLRIC 914 (1097)
Q Consensus 838 qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g--~e~~~a~~~AD~vi~~~~~-l~~lll~~Gr~~~~~i~ 914 (1097)
||.++|+.+|+ .|++|+|+|||+||+||||+|||||||++ +|. |+++||+++.++++ ....+++|||++|.|++
T Consensus 626 qK~~IV~~lq~-~g~vVamtGDGvNDapALk~ADVGIamg~~Gtda--ak~Aadivl~dd~~~~i~~av~eGR~~~~ni~ 702 (917)
T COG0474 626 QKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDA--AKEAADIVLLDDNFATIVLAVVEGRRVYVNIK 702 (917)
T ss_pred HHHHHHHHHHh-CCCEEEEeCCCchhHHHHHhcCccEEecccHHHH--HHhhcceEeecCcHHHHHHHHHHhHHHHHHHH
Confidence 99999999999 69999999999999999999999999954 454 89999999999888 33446999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhhccccccc
Q 001335 915 KVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFF 994 (1097)
Q Consensus 915 ~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~ 994 (1097)
+++.|.+++|+...++++++.++..+ ..+++++|++|+|++++++|++++|+++ ++...|++|+ +++...+|
T Consensus 703 k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~~~qll~inll~d~~pa~~L~~~~---~~~~~m~~~~---~~p~~~i~ 774 (917)
T COG0474 703 KFILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDSLPALALGVED---PESDVMKRPP---RGPEEGLF 774 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHhhhhhheeecCC---CcccccccCC---CCcccccc
Confidence 99999999999999999999988766 5679999999999999999999999865 4555666664 68889999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhh-hcCCC-ccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcccch------HHHHH
Q 001335 995 TWRVVAIWAFFSVYQSLVLYNCVT-TSSAT-GQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCNTIT------RFHYI 1066 (1097)
Q Consensus 995 ~~~~~~~~~~~~~~~~~~if~~~~-~~~~~-~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~------~~~~~ 1066 (1097)
+++.++.|++...+++.+++++.+ ++... .....|.........+++|+.+++...+..+.....|. ++.+.
T Consensus 775 ~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 854 (917)
T COG0474 775 NRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNK 854 (917)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCH
Confidence 999999999998888888887777 33222 11222221124567788888888777777664433311 23567
Q ss_pred HHHHHHHHHHHHHHHHhccCCCC
Q 001335 1067 TVGGSILAWFLFVFLYTGIMTPN 1089 (1097)
Q Consensus 1067 ~~~~si~~~~~~~~~~~~~~~~~ 1089 (1097)
.+|+++++..++.++..++|+..
T Consensus 855 ~~~~~~~~~~~l~l~~~~~~~~~ 877 (917)
T COG0474 855 YLWLALLVIIILQLLIIFLPPLN 877 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhHHhH
Confidence 77888777777777777666544
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-109 Score=945.91 Aligned_cols=844 Identities=22% Similarity=0.252 Sum_probs=634.5
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccCcccCcccchhhHHHHHHHHHHHHHHHHHHH
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKR 131 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~is~~~~~~ed~~r 131 (1097)
.+|++.||.|+++...-..++ +.+++||.++....+|+++++++.. .++.-.+.+.+++++.+....+++|+.
T Consensus 30 ~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfvl----~~~~e~~vI~liiv~nvtVG~~QEy~a 102 (972)
T KOG0202|consen 30 TRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFVL----ADFDEPFVITLIIVINVTVGFVQEYNA 102 (972)
T ss_pred HHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHHH----Hhcccceeeeeeeeeeeeeeeeeehhh
Confidence 457899999999986555443 9999999999999999999999985 222222333345555666678899999
Q ss_pred hhchhhh---cCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeeccc
Q 001335 132 FQNDMTI---NSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKAL 208 (1097)
Q Consensus 132 ~k~~~~~---n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~ 208 (1097)
.|+.+++ .+..++|+|+|+.+.+++++|||||||.|+-||+||||++|++..+ ..||||+|||||.|+.|.+-
T Consensus 103 EkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~t~ 178 (972)
T KOG0202|consen 103 EKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKDTD 178 (972)
T ss_pred HHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCcccccccCc
Confidence 9886555 4789999999999999999999999999999999999999999987 78999999999999999764
Q ss_pred ccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceeec--
Q 001335 209 ERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMN-- 286 (1097)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~~-- 286 (1097)
.... +|+ ...-+..|+++.||.+++ |.+.|+|+.||.+|.+++.
T Consensus 179 ~v~~------------------~~~---------------~~~~dk~NiaFsGT~V~~-G~a~GIVi~TG~nTeiG~I~~ 224 (972)
T KOG0202|consen 179 AVPK------------------DEN---------------ADVQDKKNIAFSGTLVVA-GRAKGIVIGTGLNTEIGKIFK 224 (972)
T ss_pred cccC------------------CCC---------------CccccceeeEeecceeec-CceeEEEEeccccchHHHHHH
Confidence 4220 000 011123455555555554 4499999999999976432
Q ss_pred -cCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHHHHHH
Q 001335 287 -SMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLI 365 (1097)
Q Consensus 287 -~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 365 (1097)
....+..++|||+++|.+...+.-+..++|+..++... .|++.+.. ...++......|..++
T Consensus 225 ~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~ni------g~f~~p~~-----------~g~~fk~~~~~f~IaV 287 (972)
T KOG0202|consen 225 MMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNI------GHFLDPVH-----------GGSWFKGALYYFKIAV 287 (972)
T ss_pred HHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhh------hhhccccc-----------cccchhchhhhhhHHH
Confidence 23446668999999999999887555555555444311 12221111 1122345677899999
Q ss_pred HHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEEEEEc
Q 001335 366 TLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIG 445 (1097)
Q Consensus 366 ~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~ 445 (1097)
.|.+.+||++||+.++...+++ ..+| +++++++|.+..+|+||.+++||||||||||+|+|.+.++++.
T Consensus 288 sLAVAAIPEGLPaVvT~tLALG-~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~ 356 (972)
T KOG0202|consen 288 SLAVAAIPEGLPAVVTTTLALG-TRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIP 356 (972)
T ss_pred HHHHHhccCCCcchhhhhHHHh-HHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEec
Confidence 9999999999999999999999 8766 8999999999999999999999999999999999999999997
Q ss_pred ceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhc--ccCCCCChhHHHHHHHHhhcccceEeccCC
Q 001335 446 GEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRG--AWRNEHNPDACKEFFRCLAICHTVLPEGDE 523 (1097)
Q Consensus 446 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~lalc~~~~~~~~~ 523 (1097)
+..++.. ++. .+ ++. +++.......+. ........+.++++..+.++||.+...+++
T Consensus 357 ~~~~~~~-~~f--~~---tg~---------------ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~ 415 (972)
T KOG0202|consen 357 DGGTATV-DEF--NP---TGT---------------TYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYND 415 (972)
T ss_pred ccccccc-ccc--cc---CCc---------------eeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCc
Confidence 7655432 000 00 000 000000000000 001123445688899999999999887665
Q ss_pred CCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCc-
Q 001335 524 SPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGR- 602 (1097)
Q Consensus 524 ~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~- 602 (1097)
. +.++ ..|.|+|.||..+|.+.|+.-...+..+- .+ ++ .....-.+.++....+||+|+||+|||.+.++.++
T Consensus 416 ~-~~~~-~~G~pTE~AL~vlaeKm~l~~~~~~~~s~--~~-~~-~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~ 489 (972)
T KOG0202|consen 416 A-DCYE-KVGEPTEGALIVLAEKMGLPGTRSTNLSN--EE-AS-ACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQS 489 (972)
T ss_pred h-hhHH-hcCCchHHHHHHHHHHcCCCcchhhcccc--cc-cc-cchhHHHHhhhheeEeecccccceEEEEEecCCCCc
Confidence 3 2222 24899999999999999986433111000 00 00 00111134456678999999999999999976554
Q ss_pred -EEEEEecchhHHHHHhhc-----------CchhHHHHHHHHHHHHHhcCCeEEEEEEEecCH---HHHHHHHHHHHHHH
Q 001335 603 -LVLYCKGADSVIYERLAN-----------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSP---DMYERWNEKFIQAK 667 (1097)
Q Consensus 603 -~~l~~KGa~~~i~~~~~~-----------~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~---~~~~~~~~~~~~a~ 667 (1097)
+.+|+|||+|.|+++|+. -.+..++.+.+...+++.+|||+|++|+++.+. ++.+.|.
T Consensus 490 ~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~------- 562 (972)
T KOG0202|consen 490 GYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLND------- 562 (972)
T ss_pred cceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcc-------
Confidence 899999999999999954 123478889999999999999999999997763 1111110
Q ss_pred hhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEE
Q 001335 668 SSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFI 747 (1097)
Q Consensus 668 ~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~ 747 (1097)
..-+...|+||+|+|++|+.||+|++|+++|+.|++|||+|.|+|||+.+||.+||+++|+...+.+
T Consensus 563 ----------~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed--- 629 (972)
T KOG0202|consen 563 ----------TSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED--- 629 (972)
T ss_pred ----------cccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc---
Confidence 0123567999999999999999999999999999999999999999999999999999998765421
Q ss_pred EecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCC
Q 001335 748 ITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCS 827 (1097)
Q Consensus 748 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~ 827 (1097)
--....+|.+++.+-++++.+....
T Consensus 630 -------------------------------------------------~~~~~~TG~efD~ls~~~~~~~~~~------ 654 (972)
T KOG0202|consen 630 -------------------------------------------------VSSMALTGSEFDDLSDEELDDAVRR------ 654 (972)
T ss_pred -------------------------------------------------ccccccchhhhhcCCHHHHHHHhhc------
Confidence 0012567777776655555544433
Q ss_pred ceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEe--cCccchhhhhhcceeccchHhHHHH-HHh
Q 001335 828 SVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI--SGQEGMQAVMASDFAIAQFRFLTDL-LLV 904 (1097)
Q Consensus 828 ~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam--~g~e~~~a~~~AD~vi~~~~~l~~l-ll~ 904 (1097)
..+|+|++|.+|.+||+.||+ .|++|+|.|||+||.|+||.||||||| +|++. ||+|||+|+.|++|...+ .+.
T Consensus 655 ~~vFaR~~P~HK~kIVeaLq~-~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV--aKeAsDMVL~DDnFstIvaAVE 731 (972)
T KOG0202|consen 655 VLVFARAEPQHKLKIVEALQS-RGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV--AKEASDMVLADDNFSTIVAAVE 731 (972)
T ss_pred ceEEEecCchhHHHHHHHHHh-cCCEEEecCCCccchhhhhhcccceeecCCccHh--hHhhhhcEEecCcHHHHHHHHH
Confidence 349999999999999999999 799999999999999999999999999 46776 999999999999996665 588
Q ss_pred hhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchh
Q 001335 905 HGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQL 984 (1097)
Q Consensus 905 ~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~l 984 (1097)
+||.+|.|+++++.|.+..|+....+.|+...+. -..+++++|++|.|++++.+|+.++|+. +++.+++.+ |+
T Consensus 732 EGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~---~p~pL~pvQiLWiNlvtDG~PA~aLG~e--p~D~DiM~k-pP- 804 (972)
T KOG0202|consen 732 EGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFG---IPEPLIPVQILWINLVTDGPPATALGFE--PVDPDIMKK-PP- 804 (972)
T ss_pred HhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC---CCCcccchhhheeeeeccCCchhhcCCC--CCChhHHhC-CC-
Confidence 9999999999999999999999988888877663 2345899999999999999999999984 344555555 44
Q ss_pred hhhcccccccCHHHHHHHHHHHHHHHHHHHHhhh-hcCCCccCCCCccch----hh------------------HHHHHH
Q 001335 985 YQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSATGQNSSGKIFG----IW------------------DVSTMA 1041 (1097)
Q Consensus 985 y~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~-~~~~~~~~~~g~~~~----~~------------------~~~~~~ 1041 (1097)
+..+..++++..++.++..|+|.++.....+. ++... +|...- +| ...||.
T Consensus 805 --R~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~----~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa 878 (972)
T KOG0202|consen 805 --RDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA----DGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMA 878 (972)
T ss_pred --CCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC----CCCcChhhhcchhhhcccccccchhhhcccccceEE
Confidence 58889999999999999999999888776666 43321 111110 00 122667
Q ss_pred HHHHHHHHHHHHHHhcccch-------HHHHHHHHHHHHHHHHHHHHHhccCC
Q 001335 1042 FTCVVVTVNLRLLMMCNTIT-------RFHYITVGGSILAWFLFVFLYTGIMT 1087 (1097)
Q Consensus 1042 ~~~~v~~~~~~~~~~~~~~~-------~~~~~~~~~si~~~~~~~~~~~~~~~ 1087 (1097)
|+++++.- +..++.+.+++ .|.|.++.+++++.++..+...|+||
T Consensus 879 ~tv~V~~e-mfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~ 930 (972)
T KOG0202|consen 879 LTVLVFIE-MFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPP 930 (972)
T ss_pred EeehhHHH-HHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEech
Confidence 77776543 44456666655 57889999999999999999999986
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-106 Score=1021.63 Aligned_cols=867 Identities=18% Similarity=0.185 Sum_probs=624.4
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccCcccCcccchhhHHHHHHHHHHHHHHHHHHH
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKR 131 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~is~~~~~~ed~~r 131 (1097)
+.|+++||.|+++.++...+. +.|++||..+++++++++++++++. ..|..+++ ++++++++++..++++++.
T Consensus 33 ~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~~---~~~~~~~i-Il~vv~in~~i~~~QE~~a 105 (1053)
T TIGR01523 33 QHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFAM---HDWIEGGV-ISAIIALNILIGFIQEYKA 105 (1053)
T ss_pred HHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHH---hhHHHHHH-HHhHHHHHHHHHHHHHHHH
Confidence 357889999999988765442 8999999999999999999999874 34555554 4567777888899999999
Q ss_pred hhchhhh---cCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeeccc
Q 001335 132 FQNDMTI---NSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKAL 208 (1097)
Q Consensus 132 ~k~~~~~---n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~ 208 (1097)
.++.+++ .+.+++|+|||++++|+++||||||||.|+.||.||||++|+++++ +.||||+|||||.|+.|.+.
T Consensus 106 ekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K~~~ 181 (1053)
T TIGR01523 106 EKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIKDAH 181 (1053)
T ss_pred HHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceecccc
Confidence 9886554 4679999999999999999999999999999999999999999876 89999999999999999864
Q ss_pred ccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceeeccC
Q 001335 209 ERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNSM 288 (1097)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~~~~ 288 (1097)
..... . ......+..|++++||.+.+ |.+.|+|+.||.+|.+++...
T Consensus 182 ~~~~~-~-------------------------------~~~~~~d~~n~lf~GT~V~~-G~g~~vVvatG~~T~~GkIa~ 228 (1053)
T TIGR01523 182 ATFGK-E-------------------------------EDTPIGDRINLAFSSSAVTK-GRAKGICIATALNSEIGAIAA 228 (1053)
T ss_pred ccccc-c-------------------------------ccCCcccCCCccccCceEEe-eeEEEEEEEecCccHHHHHHH
Confidence 31100 0 00001123455555555554 449999999999997654332
Q ss_pred ---CC-----C------------------------------CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 001335 289 ---NI-----P------------------------------SKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKK 330 (1097)
Q Consensus 289 ---~~-----~------------------------------~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 330 (1097)
.. + ..+||+|++++++..+++.+.++++++.++...+ .
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~--~-- 304 (1053)
T TIGR01523 229 GLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF--D-- 304 (1053)
T ss_pred HHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--h--
Confidence 10 0 0149999999999999888887777666543211 0
Q ss_pred cccccccCCCCCccCCCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceec
Q 001335 331 HYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASAR 410 (1097)
Q Consensus 331 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r 410 (1097)
.....+..++.+.+.++|++||+.++++.+++ +.+| +++++++|
T Consensus 305 -------------------------~~~~~~~~av~l~Va~VPegLp~~vti~La~g-~~rM----------ak~~~lVr 348 (1053)
T TIGR01523 305 -------------------------VDKEVAIYAICLAISIIPESLIAVLSITMAMG-AANM----------SKRNVIVR 348 (1053)
T ss_pred -------------------------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHH-HHHH----------HhcCCEec
Confidence 01235667889999999999999999999999 8877 88899999
Q ss_pred cCccccccccceEEEecCCCceeecceEEEEEEEcce-eccCCchhhhhhhhhhcCC--CCCccccccccccCCCCCCCC
Q 001335 411 TSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGE-IYGTGITEIERGVAQQTGM--KIPEVERSVKAVHEKGFNFDD 487 (1097)
Q Consensus 411 ~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~~-~y~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 487 (1097)
+++++|+||++++||+|||||||+|+|+++++++++. .|.....+..-.. ..+. ..+...+. .. ......+
T Consensus 349 ~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~--~~--~~~~~~~ 422 (1053)
T TIGR01523 349 KLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNP--NEGNVSGIPRFSPY--EY--SHNEAAD 422 (1053)
T ss_pred cchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCC--cccccccccccccc--cc--ccccccc
Confidence 9999999999999999999999999999999998752 2211000000000 0000 00000000 00 0000000
Q ss_pred hHhhhcc-------c-CCCCChhHHHHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEee-----
Q 001335 488 PRLLRGA-------W-RNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRR----- 554 (1097)
Q Consensus 488 ~~l~~~~-------~-~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r----- 554 (1097)
..+.... . ..+..+....+++.++++||++....+++.+.+. ..+||+|.||+.+|.+.|+.....
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~-~~GdptE~ALl~~a~~~g~~~~~~~~~~~ 501 (1053)
T TIGR01523 423 QDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK-AHGDPTEIAIHVFAKKFDLPHNALTGEED 501 (1053)
T ss_pred ccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee-eCcCccHHHHHHHHHHcCCCcccccchhh
Confidence 0000000 0 0000123456789999999998765432223222 258999999999999999742100
Q ss_pred ----cCCe-EEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCC-cEEEEEecchhHHHHHhhcC-------
Q 001335 555 ----TPTM-IYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADG-RLVLYCKGADSVIYERLANG------- 621 (1097)
Q Consensus 555 ----~~~~-~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~l~~KGa~~~i~~~~~~~------- 621 (1097)
.+.. ..++... .+.....|++++.+||||+|||||++++++++ ++++|+|||||.|+++|+..
T Consensus 502 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~ 577 (1053)
T TIGR01523 502 LLKSNENDQSSLSQHN----EKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVK 577 (1053)
T ss_pred hhhhcccccccccccc----ccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCc
Confidence 0000 0000000 00013468899999999999999999997644 58999999999999999741
Q ss_pred ----chhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeec
Q 001335 622 ----NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIE 697 (1097)
Q Consensus 622 ----~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ie 697 (1097)
+++.++.+.+++++|+++|+|||++|||+++++++..+ .+ +....+ .+.+|+||+|+|+++++
T Consensus 578 ~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~---~~~~~~--------~~~~e~~L~~~G~~~~~ 644 (1053)
T TIGR01523 578 ISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QL---KNETLN--------RATAESDLEFLGLIGIY 644 (1053)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hh---hccccc--------hhhhccCCEEEEEEeee
Confidence 22356778889999999999999999999987654221 00 000001 14579999999999999
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
||+|++++++|+.|+++||++||+|||++.||.++|++|||++.+.. .. ..
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~---~~-~~------------------------- 695 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI---HD-RD------------------------- 695 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc---cc-cc-------------------------
Confidence 99999999999999999999999999999999999999999864310 00 00
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEe
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 857 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlai 857 (1097)
......+++|.++..+.++++++... ...||||++|+||.++|+.+|+ .|++|+|+
T Consensus 696 -----------------~~~~~~vitG~~l~~l~~~~l~~~~~------~~~V~ar~sP~~K~~iV~~lq~-~g~~Vam~ 751 (1053)
T TIGR01523 696 -----------------EIMDSMVMTGSQFDALSDEEVDDLKA------LCLVIARCAPQTKVKMIEALHR-RKAFCAMT 751 (1053)
T ss_pred -----------------ccccceeeehHHhhhcCHHHHHHHhh------cCeEEEecCHHHHHHHHHHHHh-cCCeeEEe
Confidence 00012588999988765555544322 2359999999999999999998 69999999
Q ss_pred cCCCCChhhhhhcCeeEEec--CccchhhhhhcceeccchHh--HHHHHHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 001335 858 GDGANDVSMIQAAHIGVGIS--GQEGMQAVMASDFAIAQFRF--LTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFW 933 (1097)
Q Consensus 858 GDG~ND~~ml~~AdvGIam~--g~e~~~a~~~AD~vi~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~ 933 (1097)
|||+||+|||++|||||||+ |++. |+++||+++.+++| +.++ +.|||++|+|+++++.|.+++|+..+++.++
T Consensus 752 GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~ 828 (1053)
T TIGR01523 752 GDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASILNA-IEEGRRMFDNIMKFVLHLLAENVAEAILLII 828 (1053)
T ss_pred CCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99999999999999999994 5665 99999999998666 6666 8999999999999999999999999999999
Q ss_pred HHHhhcccccc--chhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhhcccccccCHHHHHHHHHHHHHHHH
Q 001335 934 FTFQTGFSGQR--FYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSL 1011 (1097)
Q Consensus 934 ~~~~~~fs~~~--~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~ 1011 (1097)
+.++..++|.+ +++++|++|+|++++.+|++++|+ | +++..+|++|+ +.+...+++++.+..+++.|++.++
T Consensus 829 ~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~-e--~~~~~~m~~~P---r~~~~~l~~~~~~~~~~~~g~~~~~ 902 (1053)
T TIGR01523 829 GLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGL-E--KAAPDLMDRLP---HDNEVGIFQKELIIDMFAYGFFLGG 902 (1053)
T ss_pred HHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhcc-C--CCChhHHhcCC---CCCCccccCHHHHHHHHHHHHHHHH
Confidence 99988777764 478999999999999999999987 2 34444555555 4667789999888889999999888
Q ss_pred HHHHhhh-hcCC--Ccc-CCC-----Ccc-chhhHHHHHHHHHHHHHHHHHHHHh-ccc---ch----------------
Q 001335 1012 VLYNCVT-TSSA--TGQ-NSS-----GKI-FGIWDVSTMAFTCVVVTVNLRLLMM-CNT---IT---------------- 1061 (1097)
Q Consensus 1012 ~if~~~~-~~~~--~~~-~~~-----g~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~~~---~~---------------- 1061 (1097)
+.+..++ .++. .+. ..+ +.. .+.....+++|+++++...+..+.. +.. |.
T Consensus 903 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1053)
T TIGR01523 903 SCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFH 982 (1053)
T ss_pred HHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCcccccccccccccc
Confidence 7765443 2111 000 000 000 1233456777777776555553321 111 11
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhccCCC
Q 001335 1062 -RFHYITVGGSILAWFLFVFLYTGIMTP 1088 (1097)
Q Consensus 1062 -~~~~~~~~~si~~~~~~~~~~~~~~~~ 1088 (1097)
.+.+.++++++++.++++++..++|+-
T Consensus 983 ~~~~N~~l~~~~~~~~~l~~~~~~~p~~ 1010 (1053)
T TIGR01523 983 SIVENKFLAWAIAFAAVSAFPTIYIPVI 1010 (1053)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHhhhhh
Confidence 246777888888888888888888743
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-105 Score=1013.13 Aligned_cols=835 Identities=19% Similarity=0.208 Sum_probs=627.7
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccCcc---------cCcccchhhHHHHHHHHHH
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSP---------VNPVTNVVPLSLVLLVSLI 122 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~---------~~~~~~~~~l~~vl~is~~ 122 (1097)
+.|+++||+|+++.++.+.+. +.|++||.+++++.++++++++++.... ...+...++++++++++++
T Consensus 43 ~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 119 (997)
T TIGR01106 43 AEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGC 119 (997)
T ss_pred HHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHH
Confidence 347889999999887666443 8899999999999999999997653110 1223334467788889999
Q ss_pred HHHHHHHHHhhchhhhc---CceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCc
Q 001335 123 KEAWEDWKRFQNDMTIN---STPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGE 199 (1097)
Q Consensus 123 ~~~~ed~~r~k~~~~~n---~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGE 199 (1097)
...++++|+++++++++ +++++|+|||++++|+++||+|||+|.|++||.+|||++|++|++ |.||||+||||
T Consensus 120 i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LTGE 195 (997)
T TIGR01106 120 FSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLTGE 195 (997)
T ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccCCC
Confidence 99999999999987766 568999999999999999999999999999999999999999875 89999999999
Q ss_pred ccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecC
Q 001335 200 TNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGH 279 (1097)
Q Consensus 200 s~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~ 279 (1097)
|.|+.|.+.+.. ..|++.+|++++||.+.+ |++.|+|++||.
T Consensus 196 S~pv~K~~~~~~-------------------------------------~~~~~~~n~l~~Gt~v~~-G~~~~~V~~tG~ 237 (997)
T TIGR01106 196 SEPQTRSPEFTH-------------------------------------ENPLETRNIAFFSTNCVE-GTARGIVVNTGD 237 (997)
T ss_pred CCceeccCCCcc-------------------------------------cCccccCCeEEeccEeee-eeEEEEEEEccc
Confidence 999999875311 123455677777777765 569999999999
Q ss_pred ccceeeccC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHH
Q 001335 280 ETKVMMNSM---NIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLV 356 (1097)
Q Consensus 280 ~Tk~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 356 (1097)
+|++++... +.+.+++|+++.++++...+..+.++++++.++++.+. .. .
T Consensus 238 ~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------------------~ 290 (997)
T TIGR01106 238 RTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL-GY--------------------------T 290 (997)
T ss_pred cchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC--------------------------C
Confidence 998876654 45667899999999999998888777776665544321 11 1
Q ss_pred HHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecc
Q 001335 357 FVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNL 436 (1097)
Q Consensus 357 ~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~ 436 (1097)
+...+..++.+++.+||++||++++++.+.+ +.++ +++++++|+++.+|+||++++||||||||||+|+
T Consensus 291 ~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~-~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~ 359 (997)
T TIGR01106 291 WLEAVIFLIGIIVANVPEGLLATVTVCLTLT-AKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNR 359 (997)
T ss_pred HHHHHHHHHHHHhhcCCccchHHHHHHHHHH-HHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCceecCc
Confidence 3445667788888899999999999999998 8766 7889999999999999999999999999999999
Q ss_pred eEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccc
Q 001335 437 MEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHT 516 (1097)
Q Consensus 437 m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~ 516 (1097)
|+|.++++++..|..+..+.. .+..+ +......+.++.++++||+
T Consensus 360 m~v~~~~~~~~~~~~~~~~~~-----------------------~~~~~------------~~~~~~~~~ll~~~alcn~ 404 (997)
T TIGR01106 360 MTVAHMWFDNQIHEADTTEDQ-----------------------SGVSF------------DKSSATWLALSRIAGLCNR 404 (997)
T ss_pred eEEEEEEECCeEEecCCccCC-----------------------CCccC------------CcccHHHHHHHHHHHHcCC
Confidence 999999998877653211000 00000 0112234578889999998
Q ss_pred eEeccCCCC--CceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEE
Q 001335 517 VLPEGDESP--ERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSV 594 (1097)
Q Consensus 517 ~~~~~~~~~--~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv 594 (1097)
+....+... ..-.+..+||+|.||++++...+..... ....|+.++.+||+|+||||++
T Consensus 405 ~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~-------------------~~~~~~~v~~~pF~s~rK~m~~ 465 (997)
T TIGR01106 405 AVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME-------------------MRERNPKVVEIPFNSTNKYQLS 465 (997)
T ss_pred CeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH-------------------HHhhCceeEEeccCCCCceEEE
Confidence 876433211 0112456899999999999865432100 1345788899999999999999
Q ss_pred EEEec---CCcEEEEEecchhHHHHHhhc---------CchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHH-HHH
Q 001335 595 VCRYA---DGRLVLYCKGADSVIYERLAN---------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYER-WNE 661 (1097)
Q Consensus 595 iv~~~---~~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~-~~~ 661 (1097)
+++.. ++++++|+|||||.|+++|+. .+++.++.+.+++++|+++|+|||++|||+++++++.. |..
T Consensus 466 v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~ 545 (997)
T TIGR01106 466 IHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQF 545 (997)
T ss_pred EEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccc
Confidence 88642 356899999999999999963 12345677888999999999999999999998765432 111
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccC
Q 001335 662 KFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINN 741 (1097)
Q Consensus 662 ~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~ 741 (1097)
+++ ..+.+|+||+|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++|++++
T Consensus 546 ----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~ 610 (997)
T TIGR01106 546 ----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISE 610 (997)
T ss_pred ----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC
Confidence 010 01345899999999999999999999999999999999999999999999999999999875
Q ss_pred CCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHh
Q 001335 742 EMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLN 821 (1097)
Q Consensus 742 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~ 821 (1097)
+... . .+ +.+.+....+.. .......++++|.++..+.++++.+
T Consensus 611 ~~~~------~---~~-----------------i~~~~~~~~~~~------~~~~~~~~vi~G~~l~~l~~~el~~---- 654 (997)
T TIGR01106 611 GNET------V---ED-----------------IAARLNIPVSQV------NPRDAKACVVHGSDLKDMTSEQLDE---- 654 (997)
T ss_pred Cccc------h---hh-----------------hhhhcccccccc------ccccccceEEEhHHhhhCCHHHHHH----
Confidence 4320 0 00 000000000000 0111224789999998776654443
Q ss_pred hhccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec--CccchhhhhhcceeccchHh--
Q 001335 822 LSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS--GQEGMQAVMASDFAIAQFRF-- 897 (1097)
Q Consensus 822 l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~--g~e~~~a~~~AD~vi~~~~~-- 897 (1097)
+...++.+||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||||+ |+|. |+++||+++.+++|
T Consensus 655 ~~~~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v--ak~aADivL~dd~f~~ 731 (997)
T TIGR01106 655 ILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFAS 731 (997)
T ss_pred HHHhcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHhhCCcceecCCcccHH--HHHhhceEEecCCHHH
Confidence 344455679999999999999999998 7999999999999999999999999984 6776 89999999999666
Q ss_pred HHHHHHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhh
Q 001335 898 LTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASL 977 (1097)
Q Consensus 898 l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~ 977 (1097)
+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++..+ .+++++|++|+|++++++|+++++. ++++++.
T Consensus 732 Iv~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~---~pl~~~qlL~inli~d~lp~~al~~--e~~~~~~ 805 (997)
T TIGR01106 732 IVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIP---LPLGTITILCIDLGTDMVPAISLAY--EKAESDI 805 (997)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCc---chhHHHHHHHHHHHHHHHHHHHHhc--CCCCccc
Confidence 6666 89999999999999999999999999999999887533 3578999999999999999999987 3456666
Q ss_pred hhcCchhhhhcccccccCHHHHHHHHH-HHHHHHHHHHHhhh-hcCCCcc------------CC---CCc--cc------
Q 001335 978 SKKYPQLYQEGIKNVFFTWRVVAIWAF-FSVYQSLVLYNCVT-TSSATGQ------------NS---SGK--IF------ 1032 (1097)
Q Consensus 978 ~~~~P~ly~~~~~~~~~~~~~~~~~~~-~~~~~~~~if~~~~-~~~~~~~------------~~---~g~--~~------ 1032 (1097)
+.++|. ..+...+++++.++.|++ .|++++++.|+.++ .+...++ .. ++. ..
T Consensus 806 m~~~P~---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (997)
T TIGR01106 806 MKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTY 882 (997)
T ss_pred ccCCCc---CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccch
Confidence 666665 234678888888877654 58888888776655 2211110 00 000 00
Q ss_pred -----hhhHHHHHHHHHHHHHHHHHHHHh-cccchH----HHHHHHHHHHHHHHHHHHHHhccC
Q 001335 1033 -----GIWDVSTMAFTCVVVTVNLRLLMM-CNTITR----FHYITVGGSILAWFLFVFLYTGIM 1086 (1097)
Q Consensus 1033 -----~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~----~~~~~~~~si~~~~~~~~~~~~~~ 1086 (1097)
......|++|+.+++.+.+..... +...++ +.+..+++++++.+++..+..++|
T Consensus 883 ~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p 946 (997)
T TIGR01106 883 EQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCP 946 (997)
T ss_pred hcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhh
Confidence 001457888888887766665532 222221 355667777776666666666666
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-106 Score=915.86 Aligned_cols=744 Identities=24% Similarity=0.285 Sum_probs=597.7
Q ss_pred CCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhcccc-----CcccCcccchhhHHHHHHHHHHHHHHH
Q 001335 53 NQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP-----MSPVNPVTNVVPLSLVLLVSLIKEAWE 127 (1097)
Q Consensus 53 ~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-----~~~~~~~~~~~~l~~vl~is~~~~~~e 127 (1097)
+|++-||+|.++..+...|. .++||-|.....+++.++|++++.. ..+.+|+.+..+++.|+++- +..+..
T Consensus 127 ~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV-~VtA~n 202 (1034)
T KOG0204|consen 127 RRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVV-LVTAVN 202 (1034)
T ss_pred HHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEE-EEeecc
Confidence 47888999999998877654 8999999999999999999999864 23457888776665443332 234666
Q ss_pred HHHHhhchhhh----cCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccce
Q 001335 128 DWKRFQNDMTI----NSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLK 203 (1097)
Q Consensus 128 d~~r~k~~~~~----n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~ 203 (1097)
||++.++.+.+ .+.++.|+|||+.++++..||+||||+.|+.||++|||+++++|++ +.||||+|||||+++
T Consensus 203 Dy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd~v 278 (1034)
T KOG0204|consen 203 DYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESDHV 278 (1034)
T ss_pred hhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCcce
Confidence 77777765544 4788999999999999999999999999999999999999999987 899999999999999
Q ss_pred eecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccce
Q 001335 204 IRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKV 283 (1097)
Q Consensus 204 ~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~ 283 (1097)
+|.+.. +.+.++||.+++|. +.++|+.+|.+|..
T Consensus 279 ~k~~~~-------------------------dPfLlSGTkv~eGs---------------------gkMlVTaVGmnt~w 312 (1034)
T KOG0204|consen 279 QKSLDK-------------------------DPFLLSGTKVMEGS---------------------GKMLVTAVGMNTQW 312 (1034)
T ss_pred eccCCC-------------------------CCeEeecceeecCc---------------------ceEEEEEeeecchH
Confidence 997643 33889999999988 99999999999965
Q ss_pred ---eeccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHH
Q 001335 284 ---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLN 360 (1097)
Q Consensus 284 ---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (1097)
|.........+||+|-++++++..+..+.++++.+++++.....-... +.. +. ....-..+.....++..
T Consensus 313 G~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~-~~~-~~-----~~~~~~~~~~~~~~v~~ 385 (1034)
T KOG0204|consen 313 GIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGK-TKI-EG-----GTGTTWSDEYIQEFVKF 385 (1034)
T ss_pred hhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhee-eec-CC-----CCCccccHHHHHHHHHH
Confidence 444455666789999999999999888888777777665443221000 000 00 00000122234456677
Q ss_pred HHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEE
Q 001335 361 MFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFF 440 (1097)
Q Consensus 361 ~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~ 440 (1097)
|..++.++++++|++||+++++..++. ..+| .+.++++|.++++|++|..+.||+|||||||.|.|++.
T Consensus 386 f~i~VTilVVAVPEGLPLAVTLsLAys-~kkM----------mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV 454 (1034)
T KOG0204|consen 386 FIIAVTILVVAVPEGLPLAVTLSLAYS-MKKM----------MKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVV 454 (1034)
T ss_pred hhheeEEEEEECCCCccHHHHHHHHHH-HHHH----------hcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEE
Confidence 888899999999999999999998887 7766 44568899999999999999999999999999999999
Q ss_pred EEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEec
Q 001335 441 KCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPE 520 (1097)
Q Consensus 441 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~ 520 (1097)
+.++++..|...... . ..-.+.....++.+++...+-...
T Consensus 455 ~~~~~~~~~k~~~~~-~---------------------------------------~~l~~~~~~ll~~gI~~Nt~g~v~ 494 (1034)
T KOG0204|consen 455 QSYIGSEHYKVNSPK-S---------------------------------------SNLPPSLLDLLLQGIAQNTTGSVV 494 (1034)
T ss_pred eeeeccccccccCcc-c---------------------------------------ccCCHHHHHHHHHHHhhcCCCeEE
Confidence 999998877632211 0 001112233344455543333333
Q ss_pred cCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecC
Q 001335 521 GDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD 600 (1097)
Q Consensus 521 ~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~ 600 (1097)
.++..+...-+.|||+|.||+.++..+|..+.. .+.+.++.+++||+|.||||+++++.++
T Consensus 495 ~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~-------------------~R~e~~v~kv~~FNS~kK~~gvvi~~~~ 555 (1034)
T KOG0204|consen 495 KPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD-------------------VRPEEKVVKVYPFNSVKKRMGVVIKLPD 555 (1034)
T ss_pred ecCCCCcCccccCCHHHHHHHHHHHHhCcchHh-------------------hcchhheeEEeccCcccceeeEEEEcCC
Confidence 333333334457999999999999999987644 2456788999999999999999999887
Q ss_pred CcEEEEEecchhHHHHHhhcC----------chhHHHHHHHHHHHHHhcCCeEEEEEEEecCHH--HHHHHHHHHHHHHh
Q 001335 601 GRLVLYCKGADSVIYERLANG----------NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPD--MYERWNEKFIQAKS 668 (1097)
Q Consensus 601 ~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~--~~~~~~~~~~~a~~ 668 (1097)
+..++|+|||.|.++..|..- +++....+++.++.||.+||||+|+|||+..+. +..+|..
T Consensus 556 ~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~------- 628 (1034)
T KOG0204|consen 556 GGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN------- 628 (1034)
T ss_pred CCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc-------
Confidence 772399999999999999761 223556789999999999999999999995443 1122211
Q ss_pred hhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEE
Q 001335 669 SLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFII 748 (1097)
Q Consensus 669 ~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i 748 (1097)
.+..+.+|+++|++||+||+||||+++|+.|++|||+|.|+||||..||.+||.+|||+.++..
T Consensus 629 ------------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d---- 692 (1034)
T KOG0204|consen 629 ------------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD---- 692 (1034)
T ss_pred ------------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc----
Confidence 1345789999999999999999999999999999999999999999999999999999987632
Q ss_pred ecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCc
Q 001335 749 TSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSS 828 (1097)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~ 828 (1097)
.+++.|+++..+.+++..+...++.
T Consensus 693 --------------------------------------------------~~~lEG~eFr~~s~ee~~~i~pkl~----- 717 (1034)
T KOG0204|consen 693 --------------------------------------------------FLALEGKEFRELSQEERDKIWPKLR----- 717 (1034)
T ss_pred --------------------------------------------------cceecchhhhhcCHHHHHhhhhhhe-----
Confidence 2477788888776667777777765
Q ss_pred eEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEe--cCccchhhhhhcceeccchHhHHHH-HHhh
Q 001335 829 VVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI--SGQEGMQAVMASDFAIAQFRFLTDL-LLVH 905 (1097)
Q Consensus 829 vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam--~g~e~~~a~~~AD~vi~~~~~l~~l-ll~~ 905 (1097)
|.+|.+|.+|..+|+.+++ .|++|++.|||.||.|+|++||||.|| +|+|. ||++||++|+|++|-... .+.+
T Consensus 718 -VlARSSP~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDIIi~DDNFssIVk~v~W 793 (1034)
T KOG0204|consen 718 -VLARSSPNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDIIILDDNFSSIVKAVKW 793 (1034)
T ss_pred -eeecCCCchHHHHHHHHHh-cCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeEEEcCchHHHHHHHHh
Confidence 9999999999999999998 799999999999999999999999988 78887 999999999999994433 4899
Q ss_pred hhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhh
Q 001335 906 GRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLY 985 (1097)
Q Consensus 906 Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly 985 (1097)
||..|.+++|+++|.+.-|++..++.|..++.. +.+++...||+|.|++++.+.+++|+. +++.++++.+.|.
T Consensus 794 GR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~---~dsPLtAVQlLWVNLIMDTLgALALAT--epPt~~Lm~RkP~-- 866 (1034)
T KOG0204|consen 794 GRNVYDNIQKFLQFQLTVNVVALIVNFVSACAT---GDSPLTAVQLLWVNLIMDTLGALALAT--EPPTDELMKRKPV-- 866 (1034)
T ss_pred hhHHHHHHHHhheeEEEEEEEeehhhhhhhhhc---CCccHHHHHHHHHHHHHHHHHHHHhcc--CCCChHHhcCCCC--
Confidence 999999999999999999999988888887776 456789999999999999999999985 3455665555564
Q ss_pred hhcccccccCHHHHHHHHHHHHHHHHHHHHhhh
Q 001335 986 QEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT 1018 (1097)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~ 1018 (1097)
|++.++++..+|-..+.+++||-+++|.+.+
T Consensus 867 --GR~~~LIt~tMwknil~qa~YQl~vl~iL~F 897 (1034)
T KOG0204|consen 867 --GRTKPLITRTMWKNILGQAVYQLIVLFILNF 897 (1034)
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998877
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-103 Score=990.30 Aligned_cols=830 Identities=21% Similarity=0.225 Sum_probs=612.0
Q ss_pred HHHHhhhhHHHHHHHHhhhcccc-Ccc------cCcccchhhHHHHHHHHHHHHHHHHHHHhhchhhh---cCceEEEee
Q 001335 78 LFEQFRRVANCYFLMISILSTTP-MSP------VNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDMTI---NSTPVEVLQ 147 (1097)
Q Consensus 78 l~~qf~~~~n~~fl~~~il~~~~-~~~------~~~~~~~~~l~~vl~is~~~~~~ed~~r~k~~~~~---n~~~~~V~r 147 (1097)
+++||++|++++++++++++++. +.+ .+|+..++.+ ++++++++...+++++..++.+.+ .+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il-~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVIL-LILVANAIVGVWQERNAEKAIEALKEYESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEE
Confidence 47999999999999999999975 221 2455555544 566667777899999888876555 467899999
Q ss_pred CCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeecccccccCCCChhhhccceEEE
Q 001335 148 GQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEV 227 (1097)
Q Consensus 148 ~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i 227 (1097)
||++++++++||+|||||.|++||.+|||++|+++++ |.||||+|||||.|+.|.+.....
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~--------------- 140 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPD--------------- 140 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCc---------------
Confidence 9999999999999999999999999999999999975 899999999999999998753110
Q ss_pred EEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceee---ccCCCCCcccHHHHHHHHH
Q 001335 228 QCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM---NSMNIPSKRSTLERKLDKL 304 (1097)
Q Consensus 228 ~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~ 304 (1097)
....+.+.+|++++||.+.+ |++.|+|++||.+|++++ +...++.+++++|++++++
T Consensus 141 -------------------~~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~ 200 (917)
T TIGR01116 141 -------------------ERAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEF 200 (917)
T ss_pred -------------------cccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHH
Confidence 00123455688888888887 679999999999998765 5556777899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHH
Q 001335 305 ILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIK 384 (1097)
Q Consensus 305 ~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~ 384 (1097)
...++.+.++++++.++++..+ |..... ..+....+...+..++.+++.+||++||++++++.
T Consensus 201 ~~~l~~~~~~~~~i~~~~~~~~------~~~~~~-----------~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l 263 (917)
T TIGR01116 201 GELLSKVIGLICILVWVINIGH------FNDPAL-----------GGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCL 263 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH------hccccc-----------cchhHHHHHHHHHHHHhhhhhccccccHHHHHHHH
Confidence 9988887777776665543221 110000 01111234456667889999999999999999999
Q ss_pred HHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhc
Q 001335 385 FFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQT 464 (1097)
Q Consensus 385 ~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~ 464 (1097)
+++ +.++ +++++++|+++.+|+||++|+||||||||||+|+|++.+++..+..+.... ... ..
T Consensus 264 ~~~-~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-~~~-----~~ 326 (917)
T TIGR01116 264 ALG-TRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN-EFC-----VT 326 (917)
T ss_pred HHH-HHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc-eEE-----ec
Confidence 999 8877 778999999999999999999999999999999999999988664321000 000 00
Q ss_pred CCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHH
Q 001335 465 GMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAA 544 (1097)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a 544 (1097)
+ .+++..+..+.+.........+....++.++++||++....++..+.+. ..+||+|.||++++
T Consensus 327 ~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~-~~gdp~E~ALl~~~ 390 (917)
T TIGR01116 327 G---------------TTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYE-KVGEATEAALKVLV 390 (917)
T ss_pred C---------------CccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCcee-eccChhHHHHHHHH
Confidence 0 0000000000000000001223466788999999998765433222222 14899999999999
Q ss_pred HHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcC---
Q 001335 545 KNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANG--- 621 (1097)
Q Consensus 545 ~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~--- 621 (1097)
.+.|+....+.++.+.....+.. ......|++++.+||||+||||||+++. ++++.+|+|||||.|+++|+..
T Consensus 391 ~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~ 466 (917)
T TIGR01116 391 EKMGLPATKNGVSSKRRPALGCN---SVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNG 466 (917)
T ss_pred HHcCCCchhcccccccccccchh---HHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecC
Confidence 99998776554443322211100 0013468899999999999999999986 4678999999999999999641
Q ss_pred -------chhHHHHHHHHHHHHHh-cCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEE
Q 001335 622 -------NEDLKKVTREHLEQFGS-SGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGC 693 (1097)
Q Consensus 622 -------~~~~~~~~~~~l~~~a~-~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~ 693 (1097)
+++.++.+.+++++|++ +|+|||++|||.+++++... . ..+ ....+.+|+||+|+|+
T Consensus 467 ~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~-~---------~~~-----~~~~~~~e~~l~~lGl 531 (917)
T TIGR01116 467 DGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREED-L---------LSD-----PANFEAIESDLTFIGV 531 (917)
T ss_pred CCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCcccccc-c---------ccc-----chhhhhhcCCcEEEEE
Confidence 12456778889999999 99999999999997643211 0 001 0123568999999999
Q ss_pred eeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHH
Q 001335 694 TAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMRE 773 (1097)
Q Consensus 694 ~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 773 (1097)
++++||+|++++++|+.|+++||++||+|||+.+||.++|+++|+..++....
T Consensus 532 ~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~--------------------------- 584 (917)
T TIGR01116 532 VGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT--------------------------- 584 (917)
T ss_pred eeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc---------------------------
Confidence 99999999999999999999999999999999999999999999986543210
Q ss_pred HHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCce
Q 001335 774 EVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKI 853 (1097)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~ 853 (1097)
...++|.++..+.++++.. ..++.+||||++|+||.++|+.+|+ .|++
T Consensus 585 -------------------------~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~ 632 (917)
T TIGR01116 585 -------------------------FKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSHKSELVELLQE-QGEI 632 (917)
T ss_pred -------------------------ceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHHHHHHHHHHHh-cCCe
Confidence 1234454444332222211 1234569999999999999999998 7999
Q ss_pred EEEecCCCCChhhhhhcCeeEEe-cCccchhhhhhcceeccch--HhHHHHHHhhhhhhHHHHhHHHHHHHHHHHHHHHH
Q 001335 854 TLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQF--RFLTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLT 930 (1097)
Q Consensus 854 vlaiGDG~ND~~ml~~AdvGIam-~g~e~~~a~~~AD~vi~~~--~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~ 930 (1097)
|+|+|||+||++||++|||||+| +|++. |+++||+++.++ +.+.++ +.|||++|+|+++++.|.+++|+...++
T Consensus 633 va~iGDG~ND~~alk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i~~~l~~ni~~~~~ 709 (917)
T TIGR01116 633 VAMTGDGVNDAPALKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFIRYMISSNIGEVVC 709 (917)
T ss_pred EEEecCCcchHHHHHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 99999999999999999999999 55555 889999999994 447777 7999999999999999999999999999
Q ss_pred HHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhhcccccccCHHHHHHHHHHHHHHH
Q 001335 931 QFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQS 1010 (1097)
Q Consensus 931 ~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~ 1010 (1097)
++++.++. ...+++++|++|+|++++.+|+++++..+ ++++ +|++|+ +.+.+++++++.++.|++.|++++
T Consensus 710 ~~~~~~~~---~~~pl~~~qll~inli~d~lp~~~l~~~~--~~~~-~m~~pP---~~~~~~l~~~~~~~~~~~~g~~~~ 780 (917)
T TIGR01116 710 IFLTAALG---IPEGLIPVQLLWVNLVTDGLPATALGFNP--PDKD-IMWKPP---RRPDEPLITGWLFFRYLVVGVYVG 780 (917)
T ss_pred HHHHHHHc---CCchHHHHHHHHHHHHHHHHHHHHHhcCC--cchh-HhcCCC---CCCCCCcccHHHHHHHHHHHHHHH
Confidence 99987763 22568999999999999999999999743 3344 455554 467889999999999999999999
Q ss_pred HHHHHhhh-hcCCCcc-CC-----------CCcc----chhhHHHHHHHHHHHHHHHHHHHHhcc-cch-----HHHHHH
Q 001335 1011 LVLYNCVT-TSSATGQ-NS-----------SGKI----FGIWDVSTMAFTCVVVTVNLRLLMMCN-TIT-----RFHYIT 1067 (1097)
Q Consensus 1011 ~~if~~~~-~~~~~~~-~~-----------~g~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~-----~~~~~~ 1067 (1097)
++.+..+. .+...++ .. ++.. .+.....|++|.++++.+.+..+...+ +.+ .+.+.+
T Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~ 860 (917)
T TIGR01116 781 LATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKW 860 (917)
T ss_pred HHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHH
Confidence 88654443 2211011 00 1100 012345688888888766666443222 111 245677
Q ss_pred HHHHHHHHHHHHHHHhccCC
Q 001335 1068 VGGSILAWFLFVFLYTGIMT 1087 (1097)
Q Consensus 1068 ~~~si~~~~~~~~~~~~~~~ 1087 (1097)
+|+++++.++++++..++|+
T Consensus 861 ~~~~~~~~~~l~~~~~~v~~ 880 (917)
T TIGR01116 861 LIGAICLSMALHFLILYVPF 880 (917)
T ss_pred HHHHHHHHHHHHHHHHHhHH
Confidence 77777777777777766663
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-103 Score=995.96 Aligned_cols=796 Identities=20% Similarity=0.239 Sum_probs=599.5
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhcccc--Ccc--------cCcccchh---hHHHHHH
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP--MSP--------VNPVTNVV---PLSLVLL 118 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~--~~~--------~~~~~~~~---~l~~vl~ 118 (1097)
++|+++||+|+++.++.+.+. +.+++||+++++++|+++++++++. ..+ .+|+.+++ +++++++
T Consensus 67 ~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~ 143 (941)
T TIGR01517 67 ERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVL 143 (941)
T ss_pred HHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhH
Confidence 457889999999998876543 8899999999999999999999873 101 14555443 3334445
Q ss_pred HHHHHHHHHHHHHhhchhhhcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCC
Q 001335 119 VSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDG 198 (1097)
Q Consensus 119 is~~~~~~ed~~r~k~~~~~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtG 198 (1097)
++++.+..++++.++.++..++.+++|+|||++++|+++||+|||||.|++||.||||++|++|++ +.||||+|||
T Consensus 144 i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~----l~VdES~LTG 219 (941)
T TIGR01517 144 VTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLS----LEIDESSITG 219 (941)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCc----EEEEecccCC
Confidence 666666666666666555556789999999999999999999999999999999999999999854 8999999999
Q ss_pred cccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEec
Q 001335 199 ETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAG 278 (1097)
Q Consensus 199 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG 278 (1097)
||.|+.|.+.+.. .+|+||.+.+|. +.++|++||
T Consensus 220 ES~pv~K~~~~~n-------------------------~v~~GT~v~~G~---------------------~~~iV~~tG 253 (941)
T TIGR01517 220 ESDPIKKGAPKDS-------------------------FLLSGTVVNEGS---------------------GRMLVTAVG 253 (941)
T ss_pred CCCcccccCCCCc-------------------------eEEeCCeEEeeE---------------------EEEEEEEeC
Confidence 9999999864310 456666666555 999999999
Q ss_pred Ccccee---eccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cccccccccccCCCCCccCCCCCCChhH
Q 001335 279 HETKVM---MNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIF-IDKKHYYLGLHNMGNSVEDDQFNPDKRF 354 (1097)
Q Consensus 279 ~~Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 354 (1097)
.+|.++ .+....+ ++++++++++++..++..+.++++++.++++.+. .....|. + . ..+....
T Consensus 254 ~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~---~--------~-~~~~~~~ 320 (941)
T TIGR01517 254 VNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRG---D--------G-RDTEEDA 320 (941)
T ss_pred CCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc---c--------c-cccchhh
Confidence 999553 3444433 4679999999999988877777766665544321 1000000 0 0 0011111
Q ss_pred HHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceee
Q 001335 355 LVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTR 434 (1097)
Q Consensus 355 ~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~ 434 (1097)
..+...|..++.+++.+||++||+.++++.... +..+ +++++++|+++.+|+||++|+||||||||||+
T Consensus 321 ~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~-~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~ 389 (941)
T TIGR01517 321 QTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYS-MKKM----------MKDNNLVRHLAACETMGSATAICSDKTGTLTQ 389 (941)
T ss_pred HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHH-HHHH----------HhCCCEEechHHhhhccCceEEEEcCcCceee
Confidence 245668889999999999999999999988887 7655 88899999999999999999999999999999
Q ss_pred cceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcc
Q 001335 435 NLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAIC 514 (1097)
Q Consensus 435 n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc 514 (1097)
|+|++++++.++..|..... . . ..+....+++...+.|
T Consensus 390 n~m~v~~~~~~~~~~~~~~~------------------------------------~-----~-~~~~~~~~~l~~~~~~ 427 (941)
T TIGR01517 390 NVMSVVQGYIGEQRFNVRDV------------------------------------L-----R-NVPKHVRNILVEGISL 427 (941)
T ss_pred ceEEEEEEEEecceEecCcc------------------------------------c-----c-cCCHHHHHHHHHHHHh
Confidence 99999999876544332100 0 0 0011234455555555
Q ss_pred cceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEE
Q 001335 515 HTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSV 594 (1097)
Q Consensus 515 ~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv 594 (1097)
|+..+...++. ...+..+||+|.|+++++++.|..... ....+++++.+||+|+||||++
T Consensus 428 ~s~~~~~~~~~-~~~~~~g~p~e~All~~~~~~~~~~~~-------------------~~~~~~~~~~~pF~s~~k~msv 487 (941)
T TIGR01517 428 NSSSEEVVDRG-GKRAFIGSKTECALLGFLLLLGRDYQE-------------------VRAEEKVVKIYPFNSERKFMSV 487 (941)
T ss_pred CCCCccccCCC-CccccCCCccHHHHHHHHHHcCCCHHH-------------------HHhhchhccccccCCCCCeEEE
Confidence 55544221111 123456899999999999887743110 1234677889999999999999
Q ss_pred EEEecCCcEEEEEecchhHHHHHhhcC----ch-----hHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHH
Q 001335 595 VCRYADGRLVLYCKGADSVIYERLANG----NE-----DLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQ 665 (1097)
Q Consensus 595 iv~~~~~~~~l~~KGa~~~i~~~~~~~----~~-----~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~ 665 (1097)
+++.+++++++++|||||.|+++|+.. +. +.++.+.+.+++|+++|+||+++|||+++.+++..|
T Consensus 488 v~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~------ 561 (941)
T TIGR01517 488 VVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK------ 561 (941)
T ss_pred EEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc------
Confidence 999877789999999999999999641 11 135678888999999999999999999876543221
Q ss_pred HHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeE
Q 001335 666 AKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQ 745 (1097)
Q Consensus 666 a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~ 745 (1097)
+..|+||+|+|+++++||+|++++++|++|+++|||+||+|||++.||.++|++|||.+++.
T Consensus 562 ----------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~-- 623 (941)
T TIGR01517 562 ----------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG-- 623 (941)
T ss_pred ----------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc--
Confidence 23478999999999999999999999999999999999999999999999999999986432
Q ss_pred EEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhcc
Q 001335 746 FIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLN 825 (1097)
Q Consensus 746 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~ 825 (1097)
.+++|+++....++++.+...
T Consensus 624 ------------------------------------------------------~vi~G~~~~~l~~~el~~~i~----- 644 (941)
T TIGR01517 624 ------------------------------------------------------LAMEGKEFRRLVYEEMDPILP----- 644 (941)
T ss_pred ------------------------------------------------------eEeeHHHhhhCCHHHHHHHhc-----
Confidence 255666665544444444333
Q ss_pred CCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec--CccchhhhhhcceeccchHh--HHHH
Q 001335 826 CSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS--GQEGMQAVMASDFAIAQFRF--LTDL 901 (1097)
Q Consensus 826 ~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~--g~e~~~a~~~AD~vi~~~~~--l~~l 901 (1097)
+..||||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ |++. |+++||+++.+++| +.++
T Consensus 645 -~~~Vfar~sPe~K~~iV~~lq~-~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aADivL~dd~f~~I~~~ 720 (941)
T TIGR01517 645 -KLRVLARSSPLDKQLLVLMLKD-MGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV--AKEASDIILLDDNFASIVRA 720 (941)
T ss_pred -cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCCchHHHHHhCCcceecCCCccHH--HHHhCCEEEecCCHHHHHHH
Confidence 2349999999999999999998 7999999999999999999999999994 6666 99999999997666 6666
Q ss_pred HHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcC
Q 001335 902 LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKY 981 (1097)
Q Consensus 902 ll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~ 981 (1097)
+.|||++|+|+++++.|.+++|+..+++.+++.++.+ ..+++++|++|+|++++++|+++++. +++++.+|++
T Consensus 721 -i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~---~~pl~~~qil~inl~~d~~~al~l~~---e~~~~~lm~~ 793 (941)
T TIGR01517 721 -VKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS---TSPLTAVQLLWVNLIMDTLAALALAT---EPPTEALLDR 793 (941)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHhhHHHHcc---CCccHHHHhC
Confidence 7999999999999999999999999999988887763 44689999999999999999999984 3456667766
Q ss_pred chhhhhcccccccCHHHHHHHHHHHHHHHHHHHHhhh-hc--CCCccCCCC-ccchhhHHHHHHHHHHHHHHHHHHHHhc
Q 001335 982 PQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TS--SATGQNSSG-KIFGIWDVSTMAFTCVVVTVNLRLLMMC 1057 (1097)
Q Consensus 982 P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~-~~--~~~~~~~~g-~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1057 (1097)
|+ +.+...+++..++..+++.|++++++.|++.+ .. .... ..++ .........|++|.++++...+..+...
T Consensus 794 ~P---~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r 869 (941)
T TIGR01517 794 KP---IGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVS-GPDEITSHQQGELNTIVFNTFVLLQLFNEINAR 869 (941)
T ss_pred CC---CCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc-CcccccccccchhhHHHHHHHHHHHHHHHHHHc
Confidence 66 35677889999999999999999988876655 21 1100 0000 0001234567888877776666554321
Q ss_pred c-c----c-hHHHHHHHHHHHHHHHHHHHHHhc
Q 001335 1058 N-T----I-TRFHYITVGGSILAWFLFVFLYTG 1084 (1097)
Q Consensus 1058 ~-~----~-~~~~~~~~~~si~~~~~~~~~~~~ 1084 (1097)
. + | .++++.++|+++++.+++++++..
T Consensus 870 ~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~ 902 (941)
T TIGR01517 870 KLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVE 902 (941)
T ss_pred cCCcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 1 1 2 234566677766666666666554
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-99 Score=965.39 Aligned_cols=838 Identities=17% Similarity=0.188 Sum_probs=593.8
Q ss_pred CCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccCcccCcccchhhHHHHHHHHHHHHHHHHHHHhh
Q 001335 54 QPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQ 133 (1097)
Q Consensus 54 ~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~is~~~~~~ed~~r~k 133 (1097)
++++||+|.+..++.+++ +.|++||..|+++++++++++|++. +++...+.++++++++.+...++.++..+
T Consensus 148 r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~~----~~~~~~~~i~~i~~~~~~~~~~~~~k~~~ 219 (1054)
T TIGR01657 148 RKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLLD----EYYYYSLCIVFMSSTSISLSVYQIRKQMQ 219 (1054)
T ss_pred HHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677899999999876655 8999999999999999988888763 43333344445566666677778777777
Q ss_pred chhhhc--CceEEEeeCCeEEEEecccCccCcEEEEc--cCCccCceEEEEeeeCCCceEEEEccccCCcccceeecccc
Q 001335 134 NDMTIN--STPVEVLQGQRWVSIPWRKLQVGDIVMVK--QDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALE 209 (1097)
Q Consensus 134 ~~~~~n--~~~~~V~r~g~~~~i~~~~L~vGDII~l~--~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~~ 209 (1097)
+.+++. +++++|+|||++++++++||+|||||.|+ +|+.+|||++|++|+ |.||||+|||||.|+.|.+.+
T Consensus 220 ~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-----~~VdES~LTGES~Pv~K~~~~ 294 (1054)
T TIGR01657 220 RLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-----CIVNESMLTGESVPVLKFPIP 294 (1054)
T ss_pred HHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-----EEEecccccCCccceecccCC
Confidence 766654 56899999999999999999999999999 999999999999975 999999999999999999864
Q ss_pred cccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEec------CCeEEEEEEEecCccce
Q 001335 210 RTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRN------TEYIIGAVIFAGHETKV 283 (1097)
Q Consensus 210 ~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~n------t~~~~gvVv~tG~~Tk~ 283 (1097)
.... ++.. +. ..+...+|++++||.+.. ++.+.|+|++||.+|..
T Consensus 295 ~~~~--~~~~-------~~--------------------~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~ 345 (1054)
T TIGR01657 295 DNGD--DDED-------LF--------------------LYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSK 345 (1054)
T ss_pred cccc--cccc-------cc--------------------ccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccc
Confidence 2100 0000 00 011234556666666653 35699999999999965
Q ss_pred ee---ccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHH
Q 001335 284 MM---NSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLN 360 (1097)
Q Consensus 284 ~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (1097)
++ ....++.+.+++++.+.+++.+++.+.++.+++.++. .+... ..+...
T Consensus 346 G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~-~~~~~--------------------------~~~~~~ 398 (1054)
T TIGR01657 346 GQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIE-LIKDG--------------------------RPLGKI 398 (1054)
T ss_pred hHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcC--------------------------CcHHHH
Confidence 44 3345556678899998888776655444333222111 11111 024567
Q ss_pred HHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEE
Q 001335 361 MFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFF 440 (1097)
Q Consensus 361 ~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~ 440 (1097)
+++++.+++.++|++||++++++..++ +.++ ++++++||+++.+|.||+||++|||||||||+|+|+|.
T Consensus 399 ~l~~l~iiv~~vP~~LP~~~ti~l~~~-~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~ 467 (1054)
T TIGR01657 399 ILRSLDIITIVVPPALPAELSIGINNS-LARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLR 467 (1054)
T ss_pred HHHHHHHHHhhcCchHHHHHHHHHHHH-HHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEE
Confidence 889999999999999999999999988 7766 78899999999999999999999999999999999999
Q ss_pred EEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEec
Q 001335 441 KCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPE 520 (1097)
Q Consensus 441 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~ 520 (1097)
+++..+...... . .. ..........+..++++||++...
T Consensus 468 ~v~~~~~~~~~~-----~-------------------------------~~-----~~~~~~~~~~~~~~~a~C~~~~~~ 506 (1054)
T TIGR01657 468 GVQGLSGNQEFL-----K-------------------------------IV-----TEDSSLKPSITHKALATCHSLTKL 506 (1054)
T ss_pred eEecccCccccc-----c-------------------------------cc-----ccccccCchHHHHHHHhCCeeEEE
Confidence 987643210000 0 00 000001223467789999998754
Q ss_pred cCCCCCceEEecCChhHHHHHHHHHHCCcEEEe-ecCC---e--EEEEeccccccCceeeEEEEEeEeecCCCCCceEEE
Q 001335 521 GDESPERITYQAASPDEAALVTAAKNFGFFFYR-RTPT---M--IYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSV 594 (1097)
Q Consensus 521 ~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~-r~~~---~--~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv 594 (1097)
.+ ...|||.|.|+++++ |+.+.. .+.. . ..+.... ....+++++.+||+|+||||||
T Consensus 507 ~~-------~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~~-------~~~~~~il~~~pF~S~~krMsv 569 (1054)
T TIGR01657 507 EG-------KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTDD-------PPQELSIIRRFQFSSALQRMSV 569 (1054)
T ss_pred CC-------EEecCHHHHHHHHhC---CCEEECCCCcccccccccceeccC-------CCceEEEEEEEeecCCCCEEEE
Confidence 21 135899999999975 555433 1110 0 0010000 1357999999999999999999
Q ss_pred EEEecC-CcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhH
Q 001335 595 VCRYAD-GRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDR 673 (1097)
Q Consensus 595 iv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r 673 (1097)
+++.++ +++++|+|||||.|+++|++.. .++.+.+.+++|+++|+|||++|||++++.++.++.+ .+
T Consensus 570 vv~~~~~~~~~~~~KGApE~Il~~c~~~~--~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~---------~~- 637 (1054)
T TIGR01657 570 IVSTNDERSPDAFVKGAPETIQSLCSPET--VPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD---------LS- 637 (1054)
T ss_pred EEEEcCCCeEEEEEECCHHHHHHHcCCcC--CChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhh---------cc-
Confidence 999754 5788999999999999998643 5678889999999999999999999998543222111 02
Q ss_pred HHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCc
Q 001335 674 EQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETN 753 (1097)
Q Consensus 674 ~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~ 753 (1097)
.+++|+||+|+|+++++||+|++++++|+.|++|||++||+|||++.||.++|++|||++++...+....+..
T Consensus 638 -------r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~ 710 (1054)
T TIGR01657 638 -------RDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPP 710 (1054)
T ss_pred -------HHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccc
Confidence 2568999999999999999999999999999999999999999999999999999999987655555443211
Q ss_pred cc-----hhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCc
Q 001335 754 AI-----RDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSS 828 (1097)
Q Consensus 754 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~ 828 (1097)
.. ..+....+..... .......... ...........+.++++|+++.++.+. ..+.+.++...++
T Consensus 711 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~~~~~~~~- 780 (1054)
T TIGR01657 711 ESGKPNQIKFEVIDSIPFAS----TQVEIPYPLG----QDSVEDLLASRYHLAMSGKAFAVLQAH-SPELLLRLLSHTT- 780 (1054)
T ss_pred cCCCCceEEEEecCcccccc----ccccccCccc----ccchhhhcccceEEEEEcHHHHHHHHh-hHHHHHHHHhcCe-
Confidence 00 0000000000000 0000000000 000001123456789999999876432 1233444444444
Q ss_pred eEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh--HHHHHHhhh
Q 001335 829 VVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF--LTDLLLVHG 906 (1097)
Q Consensus 829 vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~--l~~lll~~G 906 (1097)
||||++|+||.++|+.+|+ .|++|+|||||+||++|||+|||||||+++| |..+|||++.++++ +..+ +.+|
T Consensus 781 -VfAR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ALK~AdVGIam~~~d---as~AA~f~l~~~~~~~I~~~-I~eG 854 (1054)
T TIGR01657 781 -VFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCGALKQADVGISLSEAE---ASVAAPFTSKLASISCVPNV-IREG 854 (1054)
T ss_pred -EEEecCHHHHHHHHHHHHh-CCCeEEEEeCChHHHHHHHhcCcceeecccc---ceeecccccCCCcHHHHHHH-HHHH
Confidence 9999999999999999999 7999999999999999999999999998776 56899999998777 5555 8899
Q ss_pred hhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhh
Q 001335 907 RWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQ 986 (1097)
Q Consensus 907 r~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~ 986 (1097)
|.++.++.+++.|.+..+++..+..++..+. + ..+.++|++|.|++++.+|+++++.. .+.+.++++|+
T Consensus 855 R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-~~l~~~Q~l~i~li~~~~~~l~l~~~---~p~~~l~~~~P--- 923 (1054)
T TIGR01657 855 RCALVTSFQMFKYMALYSLIQFYSVSILYLI----G-SNLGDGQFLTIDLLLIFPVALLMSRN---KPLKKLSKERP--- 923 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----c-CcCccHHHHHHHHHHHHHHHHHHHcC---CchhhcCCCCC---
Confidence 9999999999999999887775554433222 3 34689999999999999999999863 34555665554
Q ss_pred hcccccccCHHHHHHHHHHHHHHHHHHHHhhhhcCCCcc----C---CCCccchhhHHHHHHHHHHHHHHHHHHHHhcc-
Q 001335 987 EGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQ----N---SSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCN- 1058 (1097)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~~~~~~~~----~---~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~- 1058 (1097)
...++++..+...+++++++.++.++.........+ . .++.. ......|++|.... ..++..++..+
T Consensus 924 ---~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~T~~f~~~~-~~~~~~~~~~~~ 998 (1054)
T TIGR01657 924 ---PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKEN-FPNLLNTVLFFVSS-FQYLITAIVNSK 998 (1054)
T ss_pred ---CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCccccc-CccHHHHHHHHHHH-HHHHHheEEEcC
Confidence 468999999999999999999887776652111111 0 11111 11234577774333 34443333221
Q ss_pred --c--chHHHHHHHHHHHHHHHHHHH
Q 001335 1059 --T--ITRFHYITVGGSILAWFLFVF 1080 (1097)
Q Consensus 1059 --~--~~~~~~~~~~~si~~~~~~~~ 1080 (1097)
. ..++.+..++.++++.+++++
T Consensus 999 g~pf~~~~~~N~~~~~~~~~~~~~~~ 1024 (1054)
T TIGR01657 999 GPPFREPIYKNKPFVYLLITGLGLLL 1024 (1054)
T ss_pred CcchhhhHHHhHHHHHHHHHHHHHHH
Confidence 1 235677777776666554444
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-97 Score=937.26 Aligned_cols=783 Identities=20% Similarity=0.216 Sum_probs=590.0
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHh-hhhHHHHHHHHhhhccccCcccCcccchhhHHHHHHHHHHHHHHHHHH
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQF-RRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWK 130 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf-~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~is~~~~~~ed~~ 130 (1097)
++|+++||+|+++.++.+.+. +.|++|| .+|++++++++++++++. ..|..+++.+ +++++..+..++++++
T Consensus 31 ~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~~---g~~~~~~~i~-~~i~~~~~i~~~qe~~ 103 (884)
T TIGR01522 31 SHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVFM---GNIDDAVSIT-LAILIVVTVGFVQEYR 103 (884)
T ss_pred HHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHHH---cchhhHHHHH-hHHHHHHHHHHHHHHH
Confidence 457889999999987655442 8999999 999999999999999874 3455554433 4445556678889998
Q ss_pred Hhhchhhhc---CceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeecc
Q 001335 131 RFQNDMTIN---STPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKA 207 (1097)
Q Consensus 131 r~k~~~~~n---~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~ 207 (1097)
.+++.+++. +.+++|+|||++++|+++||+|||||.|++||.+|||++|++|++ +.||||+|||||.|+.|.+
T Consensus 104 a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~K~~ 179 (884)
T TIGR01522 104 SEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVSKVT 179 (884)
T ss_pred HHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCcceeccc
Confidence 888766554 678999999999999999999999999999999999999999875 7899999999999999988
Q ss_pred cccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceeec-
Q 001335 208 LERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMN- 286 (1097)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~~- 286 (1097)
.+..... ..+..+.+...|+||.+.+|. +.++|++||.+|.+++.
T Consensus 180 ~~~~~~~-------------~~~~~~~~n~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~gki~ 225 (884)
T TIGR01522 180 APIPAAT-------------NGDLAERSNIAFMGTLVRCGH---------------------GKGIVVGTGSNTEFGAVF 225 (884)
T ss_pred ccccccc-------------cccccccCceEEeCCEEEeee---------------------EEEEEEEecCccHHHHHH
Confidence 6522100 000011112445555555444 99999999999976543
Q ss_pred --cCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHHHHH
Q 001335 287 --SMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTL 364 (1097)
Q Consensus 287 --~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (1097)
..+....++++++.++++..++..+.++++++.+++.. +.. . .+...+..+
T Consensus 226 ~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~-~-------------------------~~~~~~~~~ 278 (884)
T TIGR01522 226 KMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQG-K-------------------------DWLEMFTIS 278 (884)
T ss_pred HHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-C-------------------------CHHHHHHHH
Confidence 34455668999999999999887666555444433321 111 1 145577888
Q ss_pred HHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEEEEE
Q 001335 365 ITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSI 444 (1097)
Q Consensus 365 i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i 444 (1097)
+.+++.+||++||++++++.... +.++ +++++++|+++.+|+||++|+||||||||||+|+|++.+++.
T Consensus 279 v~llv~aiP~~Lp~~vt~~l~~~-~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~ 347 (884)
T TIGR01522 279 VSLAVAAIPEGLPIIVTVTLALG-VLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWT 347 (884)
T ss_pred HHHHHHHccchHHHHHHHHHHHH-HHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEe
Confidence 99999999999999999999888 7766 889999999999999999999999999999999999999987
Q ss_pred cceeccC-CchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEeccCC
Q 001335 445 GGEIYGT-GITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDE 523 (1097)
Q Consensus 445 ~~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~ 523 (1097)
.+..+.. .....+ + ...+..++. ......++...+++.+.++||+...+.++
T Consensus 348 ~~~~~~~~~~~~~~---------~------------~~~~~~~~~------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 400 (884)
T TIGR01522 348 SDGLHTMLNAVSLN---------Q------------FGEVIVDGD------VLHGFYTVAVSRILEAGNLCNNAKFRNEA 400 (884)
T ss_pred cCceEeeccCCccC---------C------------CCccccccc------ccccccCHHHHHHHHHHhhhCCCeecCCC
Confidence 6543210 000000 0 000000000 00011223456788889999998654321
Q ss_pred CCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEec-CCc
Q 001335 524 SPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYA-DGR 602 (1097)
Q Consensus 524 ~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~ 602 (1097)
+. ..+||+|.|+++++++.|+.. ....++.++.+||+|+||||+++++.+ +++
T Consensus 401 --~~---~~g~p~e~All~~~~~~~~~~---------------------~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~ 454 (884)
T TIGR01522 401 --DT---LLGNPTDVALIELLMKFGLDD---------------------LRETYIRVAEVPFSSERKWMAVKCVHRQDRS 454 (884)
T ss_pred --CC---cCCChHHHHHHHHHHHcCcHh---------------------HHhhCcEEeEeCCCCCCCeEEEEEEEcCCCe
Confidence 11 237999999999999877531 023467788999999999999999863 567
Q ss_pred EEEEEecchhHHHHHhhcC----------chhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhh
Q 001335 603 LVLYCKGADSVIYERLANG----------NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRD 672 (1097)
Q Consensus 603 ~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~ 672 (1097)
+++++|||||.|+.+|... +++.++.+.+++++++++|+|++++|||++
T Consensus 455 ~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------------------- 513 (884)
T TIGR01522 455 EMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------------------- 513 (884)
T ss_pred EEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC---------------------
Confidence 8999999999999999641 123456778888999999999999999875
Q ss_pred HHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCC
Q 001335 673 REQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSET 752 (1097)
Q Consensus 673 r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~ 752 (1097)
+++|+|+|+++++||+|++++++|+.|+++||+++|+|||+..||.++|+++||......
T Consensus 514 ------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~-------- 573 (884)
T TIGR01522 514 ------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ-------- 573 (884)
T ss_pred ------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc--------
Confidence 248999999999999999999999999999999999999999999999999999754321
Q ss_pred ccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEE
Q 001335 753 NAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCC 832 (1097)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~ 832 (1097)
+++|+++...-++++++... +..|||
T Consensus 574 ------------------------------------------------~v~g~~l~~~~~~~l~~~~~------~~~Vfa 599 (884)
T TIGR01522 574 ------------------------------------------------SVSGEKLDAMDDQQLSQIVP------KVAVFA 599 (884)
T ss_pred ------------------------------------------------eeEhHHhHhCCHHHHHHHhh------cCeEEE
Confidence 23444444333333333332 234999
Q ss_pred EeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec--CccchhhhhhcceeccchHh--HHHHHHhhhhh
Q 001335 833 RVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS--GQEGMQAVMASDFAIAQFRF--LTDLLLVHGRW 908 (1097)
Q Consensus 833 r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~--g~e~~~a~~~AD~vi~~~~~--l~~lll~~Gr~ 908 (1097)
|++|+||..+|+.+|+ .|++|+|+|||.||++|+++|||||+|+ |++. |+++||+++.++++ +..+ +.+||.
T Consensus 600 r~~P~~K~~iv~~lq~-~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v--a~~aaDivl~dd~~~~i~~~-i~~gR~ 675 (884)
T TIGR01522 600 RASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV--AKEAADMILTDDDFATILSA-IEEGKG 675 (884)
T ss_pred ECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHHhCCeeEecCCCcCHH--HHHhcCEEEcCCCHHHHHHH-HHHHHH
Confidence 9999999999999998 7999999999999999999999999994 3444 78999999998777 5555 899999
Q ss_pred hHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhhc
Q 001335 909 SYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEG 988 (1097)
Q Consensus 909 ~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~ 988 (1097)
+|+|+++++.|.++.|+...++.+++.++. ...+++++|++|+|++++.+|+++++. ++++++ +|++|+ +.
T Consensus 676 ~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~~a~~l~~--e~~~~~-~m~~~P---~~ 746 (884)
T TIGR01522 676 IFNNIKNFITFQLSTSVAALSLIALATLMG---FPNPLNAMQILWINILMDGPPAQSLGV--EPVDKD-VMRKPP---RP 746 (884)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHc---CCCchhHHHHHHHHHHHHhhHHHHhcc--CCCChh-HhhCCC---CC
Confidence 999999999999999999888777666553 335689999999999999999999986 234444 555544 46
Q ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHhhh-hcCCCccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcc-cch-----
Q 001335 989 IKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCN-TIT----- 1061 (1097)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~if~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~----- 1061 (1097)
++.+++++.++..+++.|++++++.++++. .+.. |. ......|++|.++++.+.+..+.... ..+
T Consensus 747 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~--~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~ 818 (884)
T TIGR01522 747 RNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD------GV--ITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIG 818 (884)
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC------Cc--chhhHHHHHHHHHHHHHHHHHHHHccCCccccccC
Confidence 788999999999999999998887766544 2211 11 11234567777777665555442211 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccC
Q 001335 1062 RFHYITVGGSILAWFLFVFLYTGIM 1086 (1097)
Q Consensus 1062 ~~~~~~~~~si~~~~~~~~~~~~~~ 1086 (1097)
++++.++|+++++.++++++..++|
T Consensus 819 ~~~n~~~~~~~~~~~~~~~~~~~~p 843 (884)
T TIGR01522 819 FFSNRMFNYAVGGSIIGQLLVIYFP 843 (884)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHH
Confidence 3467788888888888877777665
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-95 Score=912.23 Aligned_cols=755 Identities=17% Similarity=0.201 Sum_probs=560.5
Q ss_pred CCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccCcccCcccchhhHHHHHHHHHHHHHHHHHHHh
Q 001335 53 NQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRF 132 (1097)
Q Consensus 53 ~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~is~~~~~~ed~~r~ 132 (1097)
.|+++||+|+++.+|.+.+. +.|++||++|++++++++++++++. .+|..++ .++++++++.+.+.++++|..
T Consensus 75 ~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~~---~~~~~a~-~I~~iv~i~~~i~~~qe~ra~ 147 (902)
T PRK10517 75 SAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYAT---EDLFAAG-VIALMVAISTLLNFIQEARST 147 (902)
T ss_pred HHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHH---ccHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999998877553 8999999999999999999999874 3444444 455677778888888888888
Q ss_pred hchh---hhcCceEEEeeC------CeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccce
Q 001335 133 QNDM---TINSTPVEVLQG------QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLK 203 (1097)
Q Consensus 133 k~~~---~~n~~~~~V~r~------g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~ 203 (1097)
++.+ ++.+.+++|+|| |++++|++++|+|||||.|++||.||||++|+++++ +.||||+|||||.|+
T Consensus 148 ~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES~PV 223 (902)
T PRK10517 148 KAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGESLPV 223 (902)
T ss_pred HHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCCCce
Confidence 7644 445788999999 789999999999999999999999999999999876 799999999999999
Q ss_pred eecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccce
Q 001335 204 IRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKV 283 (1097)
Q Consensus 204 ~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~ 283 (1097)
.|.+.+.... ...+.+.+|++++||.+.+ |.+.++|+.||.+|.+
T Consensus 224 ~K~~~~~~~~----------------------------------~~~~~~~~n~vfaGT~V~~-G~~~~vV~atG~~T~~ 268 (902)
T PRK10517 224 EKFATTRQPE----------------------------------HSNPLECDTLCFMGTNVVS-GTAQAVVIATGANTWF 268 (902)
T ss_pred eccccccccc----------------------------------ccCccccccceeeCceEee-eeEEEEEEEeccccHH
Confidence 9988652210 0111233455555555554 3499999999999976
Q ss_pred eec---cCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHH
Q 001335 284 MMN---SMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLN 360 (1097)
Q Consensus 284 ~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (1097)
++. ..++..+++++|+.++++..++..+.++++.+.++++.+... .+...
T Consensus 269 GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~---------------------------~~~~~ 321 (902)
T PRK10517 269 GQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG---------------------------DWWEA 321 (902)
T ss_pred HHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC---------------------------CHHHH
Confidence 543 345566789999999999998887777777666544322111 14557
Q ss_pred HHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEE
Q 001335 361 MFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFF 440 (1097)
Q Consensus 361 ~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~ 440 (1097)
+..++.+++.+||++||+.++++...+ +.++ +++++++|+++.+|+||++|+||||||||||+|+|++.
T Consensus 322 l~~alsv~V~~~Pe~LP~~vt~~la~g-~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~ 390 (902)
T PRK10517 322 ALFALSVAVGLTPEMLPMIVTSTLARG-AVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLE 390 (902)
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHH-HHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccceEEEE
Confidence 888999999999999999999988887 7766 88999999999999999999999999999999999998
Q ss_pred EEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEec
Q 001335 441 KCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPE 520 (1097)
Q Consensus 441 ~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~ 520 (1097)
++... .+ .. ..+++...++|....
T Consensus 391 ~~~~~---~~------------------------------------------------~~---~~~ll~~a~l~~~~~-- 414 (902)
T PRK10517 391 NHTDI---SG------------------------------------------------KT---SERVLHSAWLNSHYQ-- 414 (902)
T ss_pred EEecC---CC------------------------------------------------CC---HHHHHHHHHhcCCcC--
Confidence 75210 00 00 012344444433221
Q ss_pred cCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecC
Q 001335 521 GDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD 600 (1097)
Q Consensus 521 ~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~ 600 (1097)
. ..+||.|.|++.++...+.. .....|+.+..+||||+||||++++++.+
T Consensus 415 --~-------~~~~p~d~All~~a~~~~~~---------------------~~~~~~~~~~~~pFds~~k~msvvv~~~~ 464 (902)
T PRK10517 415 --T-------GLKNLLDTAVLEGVDEESAR---------------------SLASRWQKIDEIPFDFERRRMSVVVAENT 464 (902)
T ss_pred --C-------CCCCHHHHHHHHHHHhcchh---------------------hhhhcCceEEEeeeCCCcceEEEEEEECC
Confidence 0 14799999999998653200 01345677788999999999999998777
Q ss_pred CcEEEEEecchhHHHHHhhcC---------chhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhh
Q 001335 601 GRLVLYCKGADSVIYERLANG---------NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLR 671 (1097)
Q Consensus 601 ~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~ 671 (1097)
+.+.+++|||+|.|+++|... +++..+.+.+..++++++|+||+++|||+++.++. .+
T Consensus 465 ~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~-~~------------ 531 (902)
T PRK10517 465 EHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG-DY------------ 531 (902)
T ss_pred CeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc-cc------------
Confidence 778899999999999999741 12345667778899999999999999998865321 00
Q ss_pred hHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecC
Q 001335 672 DREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSE 751 (1097)
Q Consensus 672 ~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~ 751 (1097)
....|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||....
T Consensus 532 ---------~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~--------- 593 (902)
T PRK10517 532 ---------QRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGE--------- 593 (902)
T ss_pred ---------ccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCccC---------
Confidence 01137899999999999999999999999999999999999999999999999999994211
Q ss_pred CccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEE
Q 001335 752 TNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVC 831 (1097)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~ 831 (1097)
+++|.++..+-++++.+...+. .||
T Consensus 594 -------------------------------------------------v~~G~el~~l~~~el~~~~~~~------~Vf 618 (902)
T PRK10517 594 -------------------------------------------------VLIGSDIETLSDDELANLAERT------TLF 618 (902)
T ss_pred -------------------------------------------------ceeHHHHHhCCHHHHHHHHhhC------cEE
Confidence 3445555443333444333332 399
Q ss_pred EEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEe-cCccchhhhhhcceeccchHh--HHHHHHhhhhh
Q 001335 832 CRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRF--LTDLLLVHGRW 908 (1097)
Q Consensus 832 ~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam-~g~e~~~a~~~AD~vi~~~~~--l~~lll~~Gr~ 908 (1097)
+|++|+||.++|+.+|+ .|++|+|+|||.||+|||++||||||| +|++. |+++||+++.++++ +..+ +.+||.
T Consensus 619 Ar~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd~~~~I~~a-i~~gR~ 694 (902)
T PRK10517 619 ARLTPMHKERIVTLLKR-EGHVVGFMGDGINDAPALRAADIGISVDGAVDI--AREAADIILLEKSLMVLEEG-VIEGRR 694 (902)
T ss_pred EEcCHHHHHHHHHHHHH-CCCEEEEECCCcchHHHHHhCCEEEEeCCcCHH--HHHhCCEEEecCChHHHHHH-HHHHHH
Confidence 99999999999999998 799999999999999999999999999 45555 99999999999888 4444 899999
Q ss_pred hHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhhc
Q 001335 909 SYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEG 988 (1097)
Q Consensus 909 ~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~ 988 (1097)
+|+|+++++.|.+..|+..++..++..++..| .++.+.|++|.|++++ +|.++++. |+.+..+|++|+ +
T Consensus 695 i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~---~pl~~~qiL~inl~~D-~~~~al~~---d~~~~~~m~~p~---r- 763 (902)
T PRK10517 695 TFANMLKYIKMTASSNFGNVFSVLVASAFLPF---LPMLPLHLLIQNLLYD-VSQVAIPF---DNVDDEQIQKPQ---R- 763 (902)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHH-HhHHhhcC---CCCChhhhcCCC---C-
Confidence 99999999999999999998888877666322 3578999999999999 78999985 234455667776 1
Q ss_pred ccccccCHHHHH-HHHHHHHHHHHHHHHhhh-hcCCCccCCCCccchhhHHHHHHHHHHHHHHHHHHHHh-cccchHHHH
Q 001335 989 IKNVFFTWRVVA-IWAFFSVYQSLVLYNCVT-TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMM-CNTITRFHY 1065 (1097)
Q Consensus 989 ~~~~~~~~~~~~-~~~~~~~~~~~~if~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~ 1065 (1097)
++.+.+. ..++.|++.+++.+..++ .++..... ... ....+.+..|+.+++...+.++.. +....++.+
T Consensus 764 -----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~F~~~~~~q~~~~~~~R~~~~~~~~~ 835 (902)
T PRK10517 764 -----WNPADLGRFMVFFGPISSIFDILTFCLMWWVFHAN-TPE--TQTLFQSGWFVVGLLSQTLIVHMIRTRRIPFIQS 835 (902)
T ss_pred -----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-chh--hHhHHHHHHHHHHHHHHHHHHHhhccCCCCcccc
Confidence 1111122 123445554433332222 11110100 000 001233344777766666655422 222234556
Q ss_pred HHHHHHHHHHHHHHHHHhccC
Q 001335 1066 ITVGGSILAWFLFVFLYTGIM 1086 (1097)
Q Consensus 1066 ~~~~~si~~~~~~~~~~~~~~ 1086 (1097)
...|..+++.++..++..++|
T Consensus 836 ~~~~~~~~~~~~~~~~~~~~p 856 (902)
T PRK10517 836 RAAWPLMIMTLIVMAVGIALP 856 (902)
T ss_pred hHHHHHHHHHHHHHHHHHHhh
Confidence 667776776666666666666
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-95 Score=910.26 Aligned_cols=774 Identities=17% Similarity=0.181 Sum_probs=561.6
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhcccc--Ccc------cCcccchhhHHHHHHHHHHH
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP--MSP------VNPVTNVVPLSLVLLVSLIK 123 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~--~~~------~~~~~~~~~l~~vl~is~~~ 123 (1097)
+.|+++||+|+++.++.+.++ +.|++||++|+.+.++++++++++. +.+ .+|...++ ++++++++.+.
T Consensus 52 ~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~i-I~~~v~l~~~i 127 (903)
T PRK15122 52 AERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVII-ILTMVLLSGLL 127 (903)
T ss_pred HHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHH-HHHHHHHHHHH
Confidence 347899999999988766442 8899999999999999999999874 111 13444444 44666777788
Q ss_pred HHHHHHHHhhchhhh---cCceEEEeeC------CeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEcc
Q 001335 124 EAWEDWKRFQNDMTI---NSTPVEVLQG------QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETA 194 (1097)
Q Consensus 124 ~~~ed~~r~k~~~~~---n~~~~~V~r~------g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes 194 (1097)
+++++++..++.+++ .+.+++|+|| |++++|++++|+|||+|.|++||.||||++|+++++ +.||||
T Consensus 128 ~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VDES 203 (903)
T PRK15122 128 RFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFISQA 203 (903)
T ss_pred HHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEcc
Confidence 999999888775544 4688999999 489999999999999999999999999999999876 789999
Q ss_pred ccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEE
Q 001335 195 NLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAV 274 (1097)
Q Consensus 195 ~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvV 274 (1097)
+|||||.|+.|.+.+......... .. + +......+.+|+++.||.+.+ |.+.++|
T Consensus 204 ~LTGES~PV~K~~~~~~~~~~~~~-------~~----~-------------~~~~~~~~~~n~vfaGT~V~~-G~~~~~V 258 (903)
T PRK15122 204 VLTGEALPVEKYDTLGAVAGKSAD-------AL----A-------------DDEGSLLDLPNICFMGTNVVS-GTATAVV 258 (903)
T ss_pred ccCCCCcceeeecccccccccccc-------cc----c-------------cccCCcccccceEEeCCEEEe-eeEEEEE
Confidence 999999999998632100000000 00 0 000011233455555555554 4499999
Q ss_pred EEecCccceeeccCC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCCh
Q 001335 275 IFAGHETKVMMNSMN--IPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDK 352 (1097)
Q Consensus 275 v~tG~~Tk~~~~~~~--~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 352 (1097)
+.||.+|.+++.... .+..++++++.++++..++..+.++++.+..++..+. ..
T Consensus 259 ~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~-~~----------------------- 314 (903)
T PRK15122 259 VATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT-KG----------------------- 314 (903)
T ss_pred EEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-cC-----------------------
Confidence 999999976543321 1445689999999998887776666555443332221 10
Q ss_pred hHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCce
Q 001335 353 RFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTL 432 (1097)
Q Consensus 353 ~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTL 432 (1097)
.+...+..++.+++.+||++||+.++++...+ +..+ +++++++|+++.+|+||++|+|||||||||
T Consensus 315 ---~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g-~~~m----------ak~~ilVk~l~avE~Lg~v~vIc~DKTGTL 380 (903)
T PRK15122 315 ---DWLEALLFALAVAVGLTPEMLPMIVSSNLAKG-AIAM----------ARRKVVVKRLNAIQNFGAMDVLCTDKTGTL 380 (903)
T ss_pred ---CHHHHHHHHHHHHHHHccchHHHHHHHHHHHH-HHHH----------HHcCCeecccchhhhhcCCcEEEecCCccc
Confidence 14557788899999999999999999988887 7666 788999999999999999999999999999
Q ss_pred eecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhh
Q 001335 433 TRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLA 512 (1097)
Q Consensus 433 T~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la 512 (1097)
|+|+|++.+++..+.. . . .+++...+
T Consensus 381 T~~~m~V~~~~~~~~~--------------------------------------------------~-~---~~~l~~a~ 406 (903)
T PRK15122 381 TQDRIILEHHLDVSGR--------------------------------------------------K-D---ERVLQLAW 406 (903)
T ss_pred ccCeEEEEEEEcCCCC--------------------------------------------------C-h---HHHHHHHH
Confidence 9999999886421100 0 0 11233333
Q ss_pred cccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceE
Q 001335 513 ICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQ 592 (1097)
Q Consensus 513 lc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 592 (1097)
+|... . . ..+||.|.|+++++.+.|... ....|+.+..+||++.||||
T Consensus 407 l~s~~-~--~--------~~~~p~e~All~~a~~~~~~~---------------------~~~~~~~~~~~pF~s~~k~m 454 (903)
T PRK15122 407 LNSFH-Q--S--------GMKNLMDQAVVAFAEGNPEIV---------------------KPAGYRKVDELPFDFVRRRL 454 (903)
T ss_pred HhCCC-C--C--------CCCChHHHHHHHHHHHcCchh---------------------hhhcCceEEEeeeCCCcCEE
Confidence 32110 0 0 147999999999998866421 02346677889999999999
Q ss_pred EEEEEecCCcEEEEEecchhHHHHHhhcC---------chhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHH
Q 001335 593 SVVCRYADGRLVLYCKGADSVIYERLANG---------NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKF 663 (1097)
Q Consensus 593 sviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~ 663 (1097)
++++++.+|++++++|||+|.|+++|... +.+.++.+.+.+++++.+|+|++++|||+++.++..++
T Consensus 455 s~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~---- 530 (903)
T PRK15122 455 SVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQ---- 530 (903)
T ss_pred EEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccc----
Confidence 99999777889999999999999999641 22345667788899999999999999999875432110
Q ss_pred HHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCC
Q 001335 664 IQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEM 743 (1097)
Q Consensus 664 ~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~ 743 (1097)
..+..|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||....
T Consensus 531 ----------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~~- 593 (903)
T PRK15122 531 ----------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPGE- 593 (903)
T ss_pred ----------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-
Confidence 012357899999999999999999999999999999999999999999999999999994210
Q ss_pred eEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhh
Q 001335 744 KQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLS 823 (1097)
Q Consensus 744 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~ 823 (1097)
+++|.++..+-++++.+...+
T Consensus 594 ---------------------------------------------------------vi~G~el~~~~~~el~~~v~~-- 614 (903)
T PRK15122 594 ---------------------------------------------------------PLLGTEIEAMDDAALAREVEE-- 614 (903)
T ss_pred ---------------------------------------------------------ccchHhhhhCCHHHHHHHhhh--
Confidence 345555554444444444333
Q ss_pred ccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEe-cCccchhhhhhcceeccchHh--HHH
Q 001335 824 LNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRF--LTD 900 (1097)
Q Consensus 824 ~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam-~g~e~~~a~~~AD~vi~~~~~--l~~ 900 (1097)
+ .||||++|+||.++|+.+|+ .|++|+|+|||.||+|||++||||||| +|++. |+++||+++.+++| +..
T Consensus 615 --~--~VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd~f~~Iv~ 687 (903)
T PRK15122 615 --R--TVFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDADVGISVDSGADI--AKESADIILLEKSLMVLEE 687 (903)
T ss_pred --C--CEEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCCEEEEeCcccHH--HHHhcCEEEecCChHHHHH
Confidence 2 39999999999999999998 799999999999999999999999999 46666 89999999999888 444
Q ss_pred HHHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhc
Q 001335 901 LLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKK 980 (1097)
Q Consensus 901 lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~ 980 (1097)
+ +.+||.+|+|+++++.|.+..|+..+++.++..++. +..++.+.|++|.|++++. |.++++. | +++++ +|+
T Consensus 688 a-i~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~qil~~nli~D~-~~lal~~-d-~~~~~-~m~ 759 (903)
T PRK15122 688 G-VIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFI---PFLPMLAIHLLLQNLMYDI-SQLSLPW-D-KMDKE-FLR 759 (903)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---ccchhHHHHHHHHHHHHHH-HHHhhcC-C-CCCHh-hcC
Confidence 4 899999999999999999999998887777665553 2245789999999999995 9999975 2 33444 456
Q ss_pred CchhhhhcccccccCHHHHHHHHHHHHHHHHHHHHhhhhcCCCccCCCCccchhhHHHHHHHHHHHHHHHHHHHHh-ccc
Q 001335 981 YPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMM-CNT 1059 (1097)
Q Consensus 981 ~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~ 1059 (1097)
.|. .++.+++++..++ ..+.+.+.++..|++.+..... |.......+.+..|+.+++...+.++.. +..
T Consensus 760 ~P~----~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~~ 829 (903)
T PRK15122 760 KPR----KWDAKNIGRFMLW-IGPTSSIFDITTFALMWFVFAA-----NSVEMQALFQSGWFIEGLLSQTLVVHMLRTQK 829 (903)
T ss_pred CCC----CCChhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhcc-----CcHhhhhhhHHHHHHHHHHHHHHHHHhhCcCC
Confidence 564 6677777765443 2222333334444332211111 1000001245666877777766665432 222
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCC
Q 001335 1060 ITRFHYITVGGSILAWFLFVFLYTGIMT 1087 (1097)
Q Consensus 1060 ~~~~~~~~~~~si~~~~~~~~~~~~~~~ 1087 (1097)
..++++...+..+++.++.+++..++|+
T Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 857 (903)
T PRK15122 830 IPFIQSTAALPVLLTTGLIMAIGIYIPF 857 (903)
T ss_pred CCcCcchHHHHHHHHHHHHHHHHHHhhH
Confidence 1334445555555556666666666663
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-95 Score=906.07 Aligned_cols=755 Identities=16% Similarity=0.171 Sum_probs=560.3
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccCcccCcccchhhHHHHHHHHHHHHHHHHHHH
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKR 131 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~is~~~~~~ed~~r 131 (1097)
+.|+++||+|+++.++.+.+. +.|++||..|++++++++++++++. ..|..+++ ++++++++.+...+++++.
T Consensus 40 ~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~p~~~iL~~~a~ls~~~---~~~~~~~i-I~~iv~~~~~i~~~~e~~a 112 (867)
T TIGR01524 40 TERLAEFGPNQTVEEKKVPNL---RLLIRAFNNPFIYILAMLMGVSYLT---DDLEATVI-IALMVLASGLLGFIQESRA 112 (867)
T ss_pred HHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhHHHHHHHHHHHHHHHH---hhHHHHHH-hhhHHHHHHHHHHHHHHHH
Confidence 347889999999998765432 8999999999999999999999874 34444444 4466667777788888888
Q ss_pred hhchh---hhcCceEEEee------CCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccc
Q 001335 132 FQNDM---TINSTPVEVLQ------GQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNL 202 (1097)
Q Consensus 132 ~k~~~---~~n~~~~~V~r------~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~ 202 (1097)
.++.+ ++.+.+++|+| ||++++|+++||+|||||.|++||.||||++|+++++ +.||||+|||||.|
T Consensus 113 ~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGES~P 188 (867)
T TIGR01524 113 ERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGESLP 188 (867)
T ss_pred HHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCCCCc
Confidence 76644 44578899999 9999999999999999999999999999999999876 79999999999999
Q ss_pred eeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccc
Q 001335 203 KIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETK 282 (1097)
Q Consensus 203 ~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk 282 (1097)
+.|.+.+.... + ....+.+|+++.||.+.+ |.+.++|+.||.+|.
T Consensus 189 V~K~~~~~~~~---~-------------------------------~~~~~~~n~vfaGT~v~~-G~~~~~V~~tG~~T~ 233 (867)
T TIGR01524 189 VEKFVEDKRAR---D-------------------------------PEILERENLCFMGTNVLS-GHAQAVVLATGSSTW 233 (867)
T ss_pred ccccCCccccc---c-------------------------------ccccccccceecCCeEEE-eEEEEEEEEEcCccH
Confidence 99988652100 0 001122344444444443 339999999999997
Q ss_pred eeec---cCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHH
Q 001335 283 VMMN---SMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVL 359 (1097)
Q Consensus 283 ~~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (1097)
+++. ..+ +.+++++|+.++++..++..+.++++++.++++.+... .+..
T Consensus 234 ~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~ 285 (867)
T TIGR01524 234 FGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG---------------------------DWLE 285 (867)
T ss_pred HHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC---------------------------CHHH
Confidence 6443 334 55578999999999999888887777666544322111 1345
Q ss_pred HHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEE
Q 001335 360 NMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEF 439 (1097)
Q Consensus 360 ~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~ 439 (1097)
.+..++.+++.++|++||++++++...+ +.++ +++++++|+++.+|+||++|+||||||||||+|+|++
T Consensus 286 ~~~~al~l~v~~iP~~Lp~~vt~~la~g-~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v 354 (867)
T TIGR01524 286 AFLFALAVAVGLTPEMLPMIVSSNLAKG-AINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIEL 354 (867)
T ss_pred HHHHHHHHHHHhCcchHHHHHHHHHHHH-HHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCeEEE
Confidence 7888899999999999999999998887 7766 8899999999999999999999999999999999999
Q ss_pred EEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEe
Q 001335 440 FKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLP 519 (1097)
Q Consensus 440 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~ 519 (1097)
.++.... + .. ..+++...++|....
T Consensus 355 ~~~~~~~-----~----------------------------------------------~~---~~~~l~~a~l~~~~~- 379 (867)
T TIGR01524 355 EKHIDSS-----G----------------------------------------------ET---SERVLKMAWLNSYFQ- 379 (867)
T ss_pred EEEecCC-----C----------------------------------------------CC---HHHHHHHHHHhCCCC-
Confidence 8863100 0 00 112333334332211
Q ss_pred ccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEec
Q 001335 520 EGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYA 599 (1097)
Q Consensus 520 ~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~ 599 (1097)
. ..+||.|.|+++++.+.+... ....++.++.+||||+||||+++++++
T Consensus 380 ---~-------~~~~p~~~Al~~~~~~~~~~~---------------------~~~~~~~~~~~pF~s~~k~ms~~v~~~ 428 (867)
T TIGR01524 380 ---T-------GWKNVLDHAVLAKLDESAARQ---------------------TASRWKKVDEIPFDFDRRRLSVVVENR 428 (867)
T ss_pred ---C-------CCCChHHHHHHHHHHhhchhh---------------------HhhcCceEEEeccCCCcCEEEEEEEcC
Confidence 0 136999999999987532100 123466778899999999999999876
Q ss_pred CCcEEEEEecchhHHHHHhhcC---------chhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhh
Q 001335 600 DGRLVLYCKGADSVIYERLANG---------NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSL 670 (1097)
Q Consensus 600 ~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~ 670 (1097)
++...+++|||++.|+++|+.. +++.++.+.+.+++++.+|+|++++|||+++.++.+ +
T Consensus 429 ~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~----------- 496 (867)
T TIGR01524 429 AEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-F----------- 496 (867)
T ss_pred CceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-c-----------
Confidence 6668899999999999999641 123456778888999999999999999998754310 0
Q ss_pred hhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEec
Q 001335 671 RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITS 750 (1097)
Q Consensus 671 ~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~ 750 (1097)
.+..|+||+|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||...+
T Consensus 497 ----------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~-------- 558 (867)
T TIGR01524 497 ----------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND-------- 558 (867)
T ss_pred ----------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC--------
Confidence 01236899999999999999999999999999999999999999999999999999995321
Q ss_pred CCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceE
Q 001335 751 ETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVV 830 (1097)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi 830 (1097)
+++|.++...-++++.+...+ ..+
T Consensus 559 --------------------------------------------------v~~g~~l~~~~~~el~~~~~~------~~v 582 (867)
T TIGR01524 559 --------------------------------------------------FLLGADIEELSDEELARELRK------YHI 582 (867)
T ss_pred --------------------------------------------------eeecHhhhhCCHHHHHHHhhh------CeE
Confidence 233444433323333332222 239
Q ss_pred EEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHh--HHHHHHhhhh
Q 001335 831 CCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRF--LTDLLLVHGR 907 (1097)
Q Consensus 831 ~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~--l~~lll~~Gr 907 (1097)
|+|++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ |++. |+++||+++.+++| +..+ +.+||
T Consensus 583 fAr~~Pe~K~~iV~~lq~-~G~vVam~GDGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLldd~~~~I~~a-i~~gR 658 (867)
T TIGR01524 583 FARLTPMQKSRIIGLLKK-AGHTVGFLGDGINDAPALRKADVGISVDTAADI--AKEASDIILLEKSLMVLEEG-VIEGR 658 (867)
T ss_pred EEECCHHHHHHHHHHHHh-CCCEEEEECCCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEecCChHHHHHH-HHHHH
Confidence 999999999999999998 7999999999999999999999999994 5555 89999999999888 4444 89999
Q ss_pred hhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhh
Q 001335 908 WSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQE 987 (1097)
Q Consensus 908 ~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~ 987 (1097)
.+|+|+++++.|.+..|+..++..++..++. ...++.+.|++|.|++++ +|.++++. |+++..+|+.|+
T Consensus 659 ~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~qil~inl~~d-~~~~al~~---~~~~~~~m~~p~---- 727 (867)
T TIGR01524 659 NTFGNILKYLKMTASSNFGNVFSVLVASAFI---PFLPMLSLHLLIQNLLYD-FSQLTLPW---DKMDREFLKKPH---- 727 (867)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHH-HHHHhhcC---CCCChHhhCCCC----
Confidence 9999999999999999998888777766553 224578999999999999 79999985 334445666776
Q ss_pred cccccccCHHHHHHHHHHHHHHHHHH---HHhhhhcCCCccCCCCccchhhHHHHHHHHHHHHHHHHHHHHh-cccchHH
Q 001335 988 GIKNVFFTWRVVAIWAFFSVYQSLVL---YNCVTTSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMM-CNTITRF 1063 (1097)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~~~~i---f~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~ 1063 (1097)
.++.+.+ ...+...|++.+++. |++.+..... .+. .....+.+..|+.+++...+.++.. ++...++
T Consensus 728 ~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~~~~ 798 (867)
T TIGR01524 728 QWEQKGM----GRFMLCIGPVSSIFDIATFLLMWFVFSA----NTV-EEQALFQSGWFVVGLLSQTLVVHMIRTEKIPFI 798 (867)
T ss_pred CCChhhH----HHHHHHHHHHHHHHHHHHHHHHHHHhcc----cch-hhhhHHHHHHHHHHHHHHHHHHHhhCcCCCCcC
Confidence 2222221 222333555444333 3222211110 010 0112345666888777776665533 2222345
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC
Q 001335 1064 HYITVGGSILAWFLFVFLYTGIMT 1087 (1097)
Q Consensus 1064 ~~~~~~~si~~~~~~~~~~~~~~~ 1087 (1097)
++...+..+++.++.+++..++|+
T Consensus 799 ~n~~~~~~~~~~~~~~~~~~~~p~ 822 (867)
T TIGR01524 799 QSRAAAPVMIATLLVMALGIIIPF 822 (867)
T ss_pred cchHHHHHHHHHHHHHHHHHHhch
Confidence 667777777777777777777775
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-92 Score=870.50 Aligned_cols=711 Identities=18% Similarity=0.223 Sum_probs=550.6
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccCcccCcccchhhHHHHHHHHHHHHHHHHHHH
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKR 131 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~is~~~~~~ed~~r 131 (1097)
+.|+++||+|+++..+.+.| +.|++||.+|+++.++++++++++. ..|..+++ ++++++++.+.+++++++.
T Consensus 8 ~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~---~~~~~~~~-i~~~~~i~~~i~~~qe~~a 79 (755)
T TIGR01647 8 KKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIAL---ENWVDFVI-ILGLLLLNATIGFIEENKA 79 (755)
T ss_pred HHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh---cchhhhhh-hhhhhHHHHHHHHHHHHHH
Confidence 34788999999998666544 7899999999999999999999874 34555555 4466667777789999988
Q ss_pred hhchhhh---cCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeeccc
Q 001335 132 FQNDMTI---NSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKAL 208 (1097)
Q Consensus 132 ~k~~~~~---n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~ 208 (1097)
.++.+.+ .+++++|+|||++++|+.+||+|||||.|++||.||||++|+++++ +.||||+|||||.|+.|.+.
T Consensus 80 ~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K~~~ 155 (755)
T TIGR01647 80 GNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTKKTG 155 (755)
T ss_pred HHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEeccC
Confidence 8875544 5789999999999999999999999999999999999999999876 79999999999999999876
Q ss_pred ccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceee---
Q 001335 209 ERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM--- 285 (1097)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~--- 285 (1097)
+ ..|+||.+.+|. +.++|+.||.+|.+++
T Consensus 156 ~---------------------------~v~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~i~~ 187 (755)
T TIGR01647 156 D---------------------------IAYSGSTVKQGE---------------------AEAVVTATGMNTFFGKAAA 187 (755)
T ss_pred C---------------------------eeeccCEEEccE---------------------EEEEEEEcCCccHHHHHHH
Confidence 4 788999998888 9999999999997654
Q ss_pred ccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHHHHHH
Q 001335 286 NSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLI 365 (1097)
Q Consensus 286 ~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 365 (1097)
...+.+..++++|+.++++..++.++.++++++.++++.+.... .+...+..++
T Consensus 188 lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~--------------------------~~~~~~~~~i 241 (755)
T TIGR01647 188 LVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE--------------------------SFREGLQFAL 241 (755)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------------------------CHHHHHHHHH
Confidence 34455566789999999999999888887777766554331211 1455788899
Q ss_pred HHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEEEEEc
Q 001335 366 TLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIG 445 (1097)
Q Consensus 366 ~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~ 445 (1097)
.+++.+||++||+.++++...+ +.++ +++++++|+++.+|+||.+|+||||||||||+|+|++.+++..
T Consensus 242 ~vlv~a~P~~Lp~~~~~~la~g-~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~ 310 (755)
T TIGR01647 242 VLLVGGIPIAMPAVLSVTMAVG-AAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPF 310 (755)
T ss_pred HHHHHhCCcchHHHHHHHHHHH-HHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEec
Confidence 9999999999999999998888 7766 8899999999999999999999999999999999999998653
Q ss_pred ceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEeccCCCC
Q 001335 446 GEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESP 525 (1097)
Q Consensus 446 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~ 525 (1097)
+..+ ...+++...++|+. .
T Consensus 311 ~~~~-----------------------------------------------------~~~~~l~~a~~~~~-----~--- 329 (755)
T TIGR01647 311 FNGF-----------------------------------------------------DKDDVLLYAALASR-----E--- 329 (755)
T ss_pred CCCC-----------------------------------------------------CHHHHHHHHHHhCC-----C---
Confidence 2100 01124445555542 0
Q ss_pred CceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecC-CcEE
Q 001335 526 ERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD-GRLV 604 (1097)
Q Consensus 526 ~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~ 604 (1097)
..+||.|.|+++++++.+. ....|++++.+||++.+|+|++++++++ |+.+
T Consensus 330 -----~~~~pi~~Ai~~~~~~~~~-----------------------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~ 381 (755)
T TIGR01647 330 -----EDQDAIDTAVLGSAKDLKE-----------------------ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRF 381 (755)
T ss_pred -----CCCChHHHHHHHHHHHhHH-----------------------HHhcCceEEEeccCCCCCeEEEEEEeCCCceEE
Confidence 1469999999998876430 0234677788999999999999998754 7788
Q ss_pred EEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 001335 605 LYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELI 684 (1097)
Q Consensus 605 l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~i 684 (1097)
+++|||++.|+++|+... +.++.+.+.+++++.+|+|++++|||+ .
T Consensus 382 ~~~kGa~e~il~~c~~~~-~~~~~~~~~~~~~~~~G~rvl~vA~~~---------------------------------~ 427 (755)
T TIGR01647 382 KVTKGAPQVILDLCDNKK-EIEEKVEEKVDELASRGYRALGVARTD---------------------------------E 427 (755)
T ss_pred EEEeCChHHHHHhcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEEEc---------------------------------C
Confidence 899999999999997542 456678888999999999999999972 1
Q ss_pred hcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCCh
Q 001335 685 EKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDP 764 (1097)
Q Consensus 685 E~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~ 764 (1097)
|++|+|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||.+.. +..+ +
T Consensus 428 e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~-----~~~~--~---------- 490 (755)
T TIGR01647 428 EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI-----YTAD--V---------- 490 (755)
T ss_pred CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----cCHH--H----------
Confidence 4689999999999999999999999999999999999999999999999999996421 0000 0
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHH
Q 001335 765 VEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTS 844 (1097)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~ 844 (1097)
+.+|.++...-++++.+...+. .+|+|++|+||.++|+
T Consensus 491 ------------------------------------l~~~~~~~~~~~~~~~~~~~~~------~vfAr~~Pe~K~~iV~ 528 (755)
T TIGR01647 491 ------------------------------------LLKGDNRDDLPSGELGEMVEDA------DGFAEVFPEHKYEIVE 528 (755)
T ss_pred ------------------------------------hcCCcchhhCCHHHHHHHHHhC------CEEEecCHHHHHHHHH
Confidence 0111111111122333333222 2999999999999999
Q ss_pred HHHcccCceEEEecCCCCChhhhhhcCeeEEe-cCccchhhhhhcceeccchHhHHHH-HHhhhhhhHHHHhHHHHHHHH
Q 001335 845 LVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFY 922 (1097)
Q Consensus 845 ~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam-~g~e~~~a~~~AD~vi~~~~~l~~l-ll~~Gr~~~~~i~~~i~~~~~ 922 (1097)
.+|+ .|++|+|+|||.||+|||++|||||+| +|++. |+++||+++.++++.... ++.+||..|+|+++++.|.+.
T Consensus 529 ~lq~-~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdv--AkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~ 605 (755)
T TIGR01647 529 ILQK-RGHLVGMTGDGVNDAPALKKADVGIAVAGATDA--ARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIA 605 (755)
T ss_pred HHHh-cCCEEEEEcCCcccHHHHHhCCeeEEecCCcHH--HHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998 799999999999999999999999999 45555 999999999998884333 489999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhhcccccccCHHHHHHH
Q 001335 923 KNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIW 1002 (1097)
Q Consensus 923 ~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~ 1002 (1097)
.|+...+..++..++.++ + ++++|++|.|++.+. |.++++....+++ ++| +..... +.+...
T Consensus 606 ~n~~~~~~~~~~~l~~~~---~-l~~~~il~~~l~~d~-~~~~l~~~~~~~~-----~~p-------~~~~~~-~~~~~~ 667 (755)
T TIGR01647 606 ETIRIVFFFGLLILILNF---Y-FPPIMVVIIAILNDG-TIMTIAYDNVKPS-----KLP-------QRWNLR-EVFTMS 667 (755)
T ss_pred ccHHHHHHHHHHHHHhCc---c-hhHHHHHHHHHHHhH-hHhhccCCCCCCC-----CCC-------CccchH-HHHHHH
Confidence 999988777776655443 3 789999999999985 6888876332211 223 222232 444556
Q ss_pred HHHHHHHHHHHHHhhh-hcCCCccC-CCCccchhhHHHHHHHHHHHHHHHHHHHH-hcccchH
Q 001335 1003 AFFSVYQSLVLYNCVT-TSSATGQN-SSGKIFGIWDVSTMAFTCVVVTVNLRLLM-MCNTITR 1062 (1097)
Q Consensus 1003 ~~~~~~~~~~if~~~~-~~~~~~~~-~~g~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~ 1062 (1097)
+..|++.++..|.+.+ .+....+. ..+.......+.|++|+.+++...+.++. .++...|
T Consensus 668 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~ 730 (755)
T TIGR01647 668 TVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFVTRTHGFFW 730 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHheeccCCCCc
Confidence 6778888877665554 22100000 01111123357899999999888777663 3333334
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-89 Score=785.66 Aligned_cols=807 Identities=19% Similarity=0.256 Sum_probs=570.0
Q ss_pred CCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccCcccCcccchhhHHHHHHHHHHHHHHHHHHHhh
Q 001335 54 QPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQ 133 (1097)
Q Consensus 54 ~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~is~~~~~~ed~~r~k 133 (1097)
|+.-||+|.|..+..+.+ ..|+.+..+|+++|+.+..++|.. .+++.++..++++.+.|.+...+|..+..+
T Consensus 169 r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~----d~Y~~YA~cI~iisv~Si~~sv~e~r~qs~ 240 (1140)
T KOG0208|consen 169 RRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLA----DSYYYYAFCIVIISVYSIVLSVYETRKQSI 240 (1140)
T ss_pred HHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhc----ccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999999998887 899999999999999999999876 467777777777778888888888888887
Q ss_pred chhhhc--CceEEEeeCCeEEEEecccCccCcEEEEcc-CCccCceEEEEeeeCCCceEEEEccccCCcccceeeccccc
Q 001335 134 NDMTIN--STPVEVLQGQRWVSIPWRKLQVGDIVMVKQ-DGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALER 210 (1097)
Q Consensus 134 ~~~~~n--~~~~~V~r~g~~~~i~~~~L~vGDII~l~~-ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~~~ 210 (1097)
..+++- ...|+|+|+|.|++|.++||+||||+.+.+ +-..|||++|++|+ |.||||+|||||.|+.|.|++.
T Consensus 241 rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-----civNEsmLTGESVPv~K~~l~~ 315 (1140)
T KOG0208|consen 241 RLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-----CIVNESMLTGESVPVTKTPLPM 315 (1140)
T ss_pred HHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-----EEeecccccCCcccccccCCcc
Confidence 777765 357999999999999999999999999998 89999999999988 9999999999999999999872
Q ss_pred ccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceee---cc
Q 001335 211 TWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM---NS 287 (1097)
Q Consensus 211 ~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~---~~ 287 (1097)
..+ ..+. ...+...+..+..|+||.+++-+.+ -.+.+.|+|++||..|.-++ +.
T Consensus 316 ~~~------~~~~--~~~~~~~~~rh~lfcGT~vlq~r~~---------------~g~~v~a~V~RTGF~T~KGqLVRsi 372 (1140)
T KOG0208|consen 316 GTD------SLDS--ITISMSTNSRHTLFCGTKVLQARAY---------------LGGPVLAMVLRTGFSTTKGQLVRSI 372 (1140)
T ss_pred ccc------cCcC--eeechhhcCcceeeccceEEEeecC---------------CCCceEEEEEeccccccccHHHHhh
Confidence 211 0111 1233344556689999998864411 12348999999999996544 44
Q ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHHHHHHHH
Q 001335 288 MNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITL 367 (1097)
Q Consensus 288 ~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l 367 (1097)
..++....++-+..-+++..+.+ +++++++...+..... + ...-..+.+++.+
T Consensus 373 lyPkP~~fkfyrds~~fi~~l~~----ia~~gfiy~~i~l~~~----g-------------------~~~~~iiirsLDl 425 (1140)
T KOG0208|consen 373 LYPKPVNFKFYRDSFKFILFLVI----IALIGFIYTAIVLNLL----G-------------------VPLKTIIIRSLDL 425 (1140)
T ss_pred cCCCCcccHHHHHHHHHHHHHHH----HHHHHHHHHhHhHHHc----C-------------------CCHHHHhhhhhcE
Confidence 44544444555554444443333 3333333222211100 0 0134578899999
Q ss_pred hcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEEEEEcce
Q 001335 368 YSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGE 447 (1097)
Q Consensus 368 ~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~~ 447 (1097)
+...+|++||.++++..... -.++ +++++.|-+++.+...|++|++|||||||||++.+.+-.+..-..
T Consensus 426 iTi~VPPALPAaltvG~~~a-~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~ 494 (1140)
T KOG0208|consen 426 ITIVVPPALPAALTVGIIYA-QSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVER 494 (1140)
T ss_pred EEEecCCCchhhhhHHHHHH-HHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccc
Confidence 99999999999999988776 5555 889999999999999999999999999999999999988765321
Q ss_pred eccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEeccCCCCCc
Q 001335 448 IYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPER 527 (1097)
Q Consensus 448 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~ 527 (1097)
.-..+. +... ..+.+ .+.+. .+ ..+ ........+..++|.||+.......
T Consensus 495 ~~~~~~-~~~~--~~~~~----------------~~~~~--~l----~~~-~~~~~~~~~~~a~atCHSL~~v~g~---- 544 (1140)
T KOG0208|consen 495 NVDDGP-ELKV--VTEDS----------------LQLFY--KL----SLR-SSSLPMGNLVAAMATCHSLTLVDGT---- 544 (1140)
T ss_pred cccccc-hhhh--hhhhh----------------cccee--ec----ccc-ccCCchHHHHHHHhhhceeEEeCCe----
Confidence 100000 0000 00000 00000 00 000 0011134588999999988765322
Q ss_pred eEEecCChhHHHHHHHHHHCCcEEEeecC--------CeE---EEEecc---ccccCceeeEEEEEeEeecCCCCCceEE
Q 001335 528 ITYQAASPDEAALVTAAKNFGFFFYRRTP--------TMI---YVRESH---VEKMGKMQDVCYEILNVLEFNSTRKRQS 593 (1097)
Q Consensus 528 ~~y~~~sp~e~al~~~a~~~g~~~~~r~~--------~~~---~i~~~~---~~~~~~~~~~~~~il~~~~F~s~rkrms 593 (1097)
..|+|.|.-+.+ ..|+.+.+... +.+ .++... +.. .+.....+.+++.+||+|..+|||
T Consensus 545 ---l~GDPLdlkmfe---~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~-t~~~~~~~si~k~feF~S~LrRMS 617 (1140)
T KOG0208|consen 545 ---LVGDPLDLKMFE---STGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQS-TECGEGEISIVKQFEFSSALRRMS 617 (1140)
T ss_pred ---eccCceeeeeee---ccceEEEeccccchhhhhhCCccCCEeCCCcccccCC-CcCCCcceEEEEecccchhhheEE
Confidence 247888866655 46777755311 011 121111 000 000123699999999999999999
Q ss_pred EEEEec-CCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhh
Q 001335 594 VVCRYA-DGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRD 672 (1097)
Q Consensus 594 viv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~ 672 (1097)
|||+++ +++..+|+|||||.|.+.|+++. +++++++.++.|+.+|+|++++|+|+|+.. .|.+. .
T Consensus 618 VIv~~~~e~~~~~ftKGaPE~I~~ic~p~t--vP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~----~----- 683 (1140)
T KOG0208|consen 618 VIVSTGGEDKMMVFTKGAPESIAEICKPET--VPADYQEVLKEYTHQGFRVIALASKELETS---TLQKA----Q----- 683 (1140)
T ss_pred EEEecCCCCceEeeccCCHHHHHHhcCccc--CCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHH----h-----
Confidence 999985 56799999999999999999875 788999999999999999999999999875 33221 1
Q ss_pred HHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCC
Q 001335 673 REQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSET 752 (1097)
Q Consensus 673 r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~ 752 (1097)
...++.+|.||+|+|++.+|++||++++.+|++|++|+|+++|+||||..||+.+|++||++.+..+.+....+.
T Consensus 684 -----~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~ 758 (1140)
T KOG0208|consen 684 -----KLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEP 758 (1140)
T ss_pred -----hccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccC
Confidence 113478999999999999999999999999999999999999999999999999999999999998888776663
Q ss_pred ccchh-----cccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCC
Q 001335 753 NAIRD-----VEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCS 827 (1097)
Q Consensus 753 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~ 827 (1097)
.+... +...+........ ++... + ...............+.+.++|+.+..++ .+..+.+.++...++
T Consensus 759 ~~~~~~~~i~w~~ve~~~~~~~~-~~~~~-~----~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~~Il~~~~ 831 (1140)
T KOG0208|consen 759 PEDDSIAQIVWLCVESQTQFLDP-KEPDP-D----LASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVPKILLKGT 831 (1140)
T ss_pred CccCCCceeEEEEccCccccCCC-CccCc-c----ccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHHHHHhcCe
Confidence 22111 0000000000000 00000 0 00000001112356788999999999888 455556666666666
Q ss_pred ceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceecc--chHhHHHHHHhh
Q 001335 828 SVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIA--QFRFLTDLLLVH 905 (1097)
Q Consensus 828 ~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~--~~~~l~~lll~~ 905 (1097)
|||||+|.||+++|+.+|+ .+..|+|||||+|||+|||+||+||+++.+| |.-||.|.-. +.++...+ +.+
T Consensus 832 --VfARMsP~qK~~Lie~lQk-l~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~v-IrE 904 (1140)
T KOG0208|consen 832 --VFARMSPDQKAELIEALQK-LGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDV-IRE 904 (1140)
T ss_pred --EEeecCchhHHHHHHHHHh-cCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHH-Hhh
Confidence 9999999999999999999 7999999999999999999999999999888 7889999987 44445555 899
Q ss_pred hhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhh
Q 001335 906 GRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLY 985 (1097)
Q Consensus 906 Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly 985 (1097)
||..+..--...+|.-.+. +++|...++..+ -..-+++.|.++.+++....-+++++-+ |+..++-..+|
T Consensus 905 GRaALVTSf~~FkYMalYs----~iqFisv~~LY~-~~~nl~D~Qfl~iDLlii~pia~~m~~~--~a~~~L~~~rP--- 974 (1140)
T KOG0208|consen 905 GRAALVTSFACFKYMALYS----AIQFISVVFLYL-INSNLGDLQFLFIDLLIITPIAVMMSRF--DASDKLFPKRP--- 974 (1140)
T ss_pred hhhhhhhhHHHHHHHHHHH----HHHHHhhheeee-ecccccchhhhhhHHHHHHHHHHHHccC--cHHHHhcCCCC---
Confidence 9998877766666654443 333433333222 3345688899999988866555555543 44455444444
Q ss_pred hhcccccccCHHHHHHHHHHHHHHHHHHHHhhh
Q 001335 986 QEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT 1018 (1097)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~ 1018 (1097)
...+++.+.+...+++.++..++-++.+.
T Consensus 975 ----~~~L~s~~~~~~l~~q~vli~l~q~i~~l 1003 (1140)
T KOG0208|consen 975 ----PTNLLSKKILVPLLLQIVLICLVQWILTL 1003 (1140)
T ss_pred ----CccccccchhhhhHHHHHHHHHHHHhhhe
Confidence 35567777665555555555555444443
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-86 Score=753.03 Aligned_cols=834 Identities=19% Similarity=0.205 Sum_probs=622.0
Q ss_pred CCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhcccc--C--cc-----cCcccchhhHHHHHHHHHHHH
Q 001335 54 QPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP--M--SP-----VNPVTNVVPLSLVLLVSLIKE 124 (1097)
Q Consensus 54 ~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~--~--~~-----~~~~~~~~~l~~vl~is~~~~ 124 (1097)
++.+-|+|.++.+|-+.-+ ..|..|+...+.+..++.++++++. + +. .+..+..+.|+.+++++.+-.
T Consensus 67 ~L~rdG~NaL~Ppk~t~~w---ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~ 143 (1019)
T KOG0203|consen 67 KLARDGPNALTPPKTTPEW---IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFS 143 (1019)
T ss_pred hhccCCCCCCCCCCCChHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCC
Confidence 5778999999998877632 5688999999999999999999865 1 11 111222333444444554444
Q ss_pred HHHHHHHhh---chhhhcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCccc
Q 001335 125 AWEDWKRFQ---NDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETN 201 (1097)
Q Consensus 125 ~~ed~~r~k---~~~~~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~ 201 (1097)
.++..+-.+ +.+.+-++.++|+|||....+..++|+|||+|.++-|+++|||++++++.+ |+||+|+|||||.
T Consensus 144 ~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTGesE 219 (1019)
T KOG0203|consen 144 YYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTGESE 219 (1019)
T ss_pred CccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEeccccccccC
Confidence 444433332 344556899999999999999999999999999999999999999999998 9999999999999
Q ss_pred ceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCcc
Q 001335 202 LKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHET 281 (1097)
Q Consensus 202 ~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~T 281 (1097)
|..+.+.....+-.+. ....|.+|..++|. ++|+|++||.+|
T Consensus 220 P~~~~~~~t~~~~~Et-----------------~Ni~f~st~~veG~---------------------~~givi~tGd~T 261 (1019)
T KOG0203|consen 220 PQTRSPEFTHENPLET-----------------RNIAFFSTNCVEGT---------------------GRGIVIATGDRT 261 (1019)
T ss_pred CccCCccccccCchhh-----------------eeeeeeeeEEecce---------------------EEEEEEecCCce
Confidence 9998775422111111 11456666667666 999999999999
Q ss_pred ceeeccC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHH
Q 001335 282 KVMMNSM---NIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFV 358 (1097)
Q Consensus 282 k~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~ 358 (1097)
.+++... .....++|+++.+++++.++..+++++++..+++.... .+ .++
T Consensus 262 v~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~-gy--------------------------~~l 314 (1019)
T KOG0203|consen 262 VMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL-GY--------------------------EWL 314 (1019)
T ss_pred EEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-cc--------------------------hhH
Confidence 9877653 45677899999999999999888877776665444332 21 245
Q ss_pred HHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceE
Q 001335 359 LNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLME 438 (1097)
Q Consensus 359 ~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~ 438 (1097)
..+...+.+.+..+|.+|+++++.....- +.+| +++++++|++.++|+||...+||+|||||||+|.|+
T Consensus 315 ~avv~~i~iivAnvPeGL~~tvTv~Ltlt-akrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTqnrMt 383 (1019)
T KOG0203|consen 315 RAVVFLIGIIVANVPEGLLATVTVCLTLT-AKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMT 383 (1019)
T ss_pred HHhhhhheeEEecCcCCccceehhhHHHH-HHHH----------hhceeEEeeeeheeecccceeEeecceeeEEecceE
Confidence 56666889999999999999999988887 8877 889999999999999999999999999999999999
Q ss_pred EEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceE
Q 001335 439 FFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVL 518 (1097)
Q Consensus 439 ~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~ 518 (1097)
|.++|.++.....+.++... +-. ....+.....+.++..+||.+.
T Consensus 384 Vahlw~d~~i~~~d~~~~~~-----------------------~~~------------~~~~~~~~~~l~r~~~lCn~a~ 428 (1019)
T KOG0203|consen 384 VAHLWFDNQIHEADTTEDQS-----------------------GQS------------FDKSSATFIALSRIATLCNRAV 428 (1019)
T ss_pred EEeeccCCceeeeechhhhh-----------------------ccc------------ccccCchHHHHHHHHHHhCcce
Confidence 99999887654332221110 000 0112335678999999999998
Q ss_pred eccCCCCC--ceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEE
Q 001335 519 PEGDESPE--RITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVC 596 (1097)
Q Consensus 519 ~~~~~~~~--~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv 596 (1097)
....+.+- .-.-..+++.|.||++++.-.-... ...++.++.+...||+|.+|..-.+.
T Consensus 429 ~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~-------------------~~~R~~~~kv~eipfNSt~Kyqlsih 489 (1019)
T KOG0203|consen 429 FKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV-------------------MELRERNPKVAEIPFNSTNKYQLSIH 489 (1019)
T ss_pred ecccccCCceeeeeccCCHHHHHHHHHHHHhcchH-------------------HHHHHhhHHhhcCCcccccceEEEEE
Confidence 76433221 1223468999999999987532111 00245677788899999999998887
Q ss_pred EecC---CcEEEEEecchhHHHHHhhc---------CchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHH
Q 001335 597 RYAD---GRLVLYCKGADSVIYERLAN---------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFI 664 (1097)
Q Consensus 597 ~~~~---~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~ 664 (1097)
+..+ .++.+..|||||.++++|+. .+.+..+.+.+...++...|-||+.||+++++++++.....-.-
T Consensus 490 ~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~ 569 (1019)
T KOG0203|consen 490 ETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDT 569 (1019)
T ss_pred ecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeec
Confidence 7643 57899999999999999976 12346677888889999999999999999999876543211000
Q ss_pred HHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCe
Q 001335 665 QAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK 744 (1097)
Q Consensus 665 ~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~ 744 (1097)
.. -+.--.++.|+|++++-||+|..+|+++.+||.||||+.|.|||++.||.++|++.||+..+..
T Consensus 570 ---d~-----------~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~e 635 (1019)
T KOG0203|consen 570 ---DD-----------VNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSE 635 (1019)
T ss_pred ---CC-----------CCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCch
Confidence 00 0111258999999999999999999999999999999999999999999999999999875432
Q ss_pred EEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcc-cccCCCeEEEEEcCccchhhcChhHHHHHHhhh
Q 001335 745 QFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYI-HSISGEKLALIIDGKCLMYALDPSLRVILLNLS 823 (1097)
Q Consensus 745 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~ 823 (1097)
..- +......... ..+.....+.++.|.++..+..+++.+ +.
T Consensus 636 t~e---------------------------------~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~----il 678 (1019)
T KOG0203|consen 636 TVE---------------------------------DIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDE----LL 678 (1019)
T ss_pred hhh---------------------------------hhHHhcCCcccccCccccceEEEecccccccCHHHHHH----HH
Confidence 100 0111111110 112334567899999987666554444 44
Q ss_pred ccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEe--cCccchhhhhhcceeccchHhHHHH
Q 001335 824 LNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI--SGQEGMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 824 ~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam--~g~e~~~a~~~AD~vi~~~~~l~~l 901 (1097)
....-.||+|.||+||..||+..|+ .|.+|+.+|||.||.||||.||||||| +|++. +|.+||.++.|++|-+..
T Consensus 679 ~nh~eIVFARTSPqQKLiIVe~cQr-~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKqAADmILLDDNFASIV 755 (1019)
T KOG0203|consen 679 QNHQEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIV 755 (1019)
T ss_pred HhCCceEEEecCccceEEeEhhhhh-cCcEEEEeCCCcCCChhhcccccceeeccccchH--HHhhcceEEecCcchhhe
Confidence 4455679999999999999999999 799999999999999999999999998 67777 899999999999996654
Q ss_pred -HHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccc-hhhHHHHHHHHHHhhHHHHHHhhccccCChhhhh
Q 001335 902 -LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRF-YDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSK 979 (1097)
Q Consensus 902 -ll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~-~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~ 979 (1097)
-+.+||.+|+|++|.|.|.+..|+..+.+.++|.++ |.|+ +....++.+++..+..|++.+++. .+.++.+.
T Consensus 756 tGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~----giPLplgtitIL~IDLgTDmvPAiSLAYE--~aEsDIM~ 829 (1019)
T KOG0203|consen 756 TGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILF----GIPLPLGTVTILCIDLGTDIVPAISLAYE--KAESDIML 829 (1019)
T ss_pred eecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHh----CCCcccchhhhhhhHhhcccchhhhHhcc--CchhhHHh
Confidence 377899999999999999999999999998888877 6676 566789999999999999999863 23445555
Q ss_pred cCchhhhhcccccccCHHHH-HHHHHHHHHHHHHHHHhhh-hcCCCccC---------------------CCCccchh--
Q 001335 980 KYPQLYQEGIKNVFFTWRVV-AIWAFFSVYQSLVLYNCVT-TSSATGQN---------------------SSGKIFGI-- 1034 (1097)
Q Consensus 980 ~~P~ly~~~~~~~~~~~~~~-~~~~~~~~~~~~~if~~~~-~~~~~~~~---------------------~~g~~~~~-- 1034 (1097)
+.|. ....+++.|.+.+ ..++..|.+|++..|+.++ .+...++. +.|+.-++
T Consensus 830 r~PR---~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeq 906 (1019)
T KOG0203|consen 830 RPPR---NPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQ 906 (1019)
T ss_pred cCCC---CCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHH
Confidence 5554 3356788888874 5688899999999998877 55444442 22332222
Q ss_pred -----hHHHHHHHHHHHHHHHHHHHHh-cccchHH----HHHHHHHHHHHHHHHHHHHhccCC
Q 001335 1035 -----WDVSTMAFTCVVVTVNLRLLMM-CNTITRF----HYITVGGSILAWFLFVFLYTGIMT 1087 (1097)
Q Consensus 1035 -----~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~----~~~~~~~si~~~~~~~~~~~~~~~ 1087 (1097)
+...+..|.+++.++-..+.+. ++.-+.+ .|..++++++.-.++..+.++.|.
T Consensus 907 Rk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg 969 (1019)
T KOG0203|consen 907 RKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPG 969 (1019)
T ss_pred HHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCcc
Confidence 2233444555555555554433 4445554 445677777777777777777665
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-75 Score=693.67 Aligned_cols=585 Identities=16% Similarity=0.170 Sum_probs=433.9
Q ss_pred HHhhhhHHHHHHHHhhhcccc--Ccc----cCc--ccchhhHHHHHH---HHHHHHHHHHHHHhhchhhhc---Cc-eEE
Q 001335 80 EQFRRVANCYFLMISILSTTP--MSP----VNP--VTNVVPLSLVLL---VSLIKEAWEDWKRFQNDMTIN---ST-PVE 144 (1097)
Q Consensus 80 ~qf~~~~n~~fl~~~il~~~~--~~~----~~~--~~~~~~l~~vl~---is~~~~~~ed~~r~k~~~~~n---~~-~~~ 144 (1097)
.||++|..+.++++++++++. +.. .+| +..+..++++++ ++.+.|.+.++|..++.+.+. +. +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 477899999999999998864 211 111 223333333322 233334444555555444333 33 565
Q ss_pred -EeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeecccccccCCCChhhhccc
Q 001335 145 -VLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEF 223 (1097)
Q Consensus 145 -V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~ 223 (1097)
|.|||++++++.++|+|||+|.|++||.||||+++++|+ +.||||+|||||.|+.|.++.+.
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~-----~~VDESaLTGES~PV~K~~g~d~------------ 170 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGL-----ATVDESAITGESAPVIKESGGDF------------ 170 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcc-----eEEecchhcCCCCceeccCCCcc------------
Confidence 679999999999999999999999999999999999986 69999999999999999886210
Q ss_pred eEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceee---ccCCCCCcccHHHHH
Q 001335 224 KGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM---NSMNIPSKRSTLERK 300 (1097)
Q Consensus 224 ~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~---~~~~~~~k~s~l~~~ 300 (1097)
..+|+||.+.+|. +.++|+.||.+|.+.+ .....+.++||+|..
T Consensus 171 ------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~ 217 (673)
T PRK14010 171 ------------DNVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIA 217 (673)
T ss_pred ------------CeeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHHHH
Confidence 0578898888877 9999999999996643 445667778999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHH
Q 001335 301 LDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSI 380 (1097)
Q Consensus 301 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l 380 (1097)
+..+...+..+.+++ +. +.++.. .|. .+...+...+.+.+.+||++|+..+
T Consensus 218 l~~l~~~l~ii~l~~--~~---~~~~~~---~~~---------------------~~~~~~~~~val~V~~IP~aL~~~~ 268 (673)
T PRK14010 218 LFTLLMTLTIIFLVV--IL---TMYPLA---KFL---------------------NFNLSIAMLIALAVCLIPTTIGGLL 268 (673)
T ss_pred HHHHHHHHhHHHHHH--HH---HHHHHH---hhc---------------------cHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 776654433222111 11 111000 000 0122455666777778899999988
Q ss_pred HHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEEEEEcceeccCCchhhhhhh
Q 001335 381 ETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGV 460 (1097)
Q Consensus 381 ~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~ 460 (1097)
+++...+ +.++ +++++++|+...+|.||++|++|||||||||+|++.+..+...+.
T Consensus 269 ~~~~~~g-~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~------------- 324 (673)
T PRK14010 269 SAIGIAG-MDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS------------- 324 (673)
T ss_pred HHHHHHH-HHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC-------------
Confidence 8888777 6655 889999999999999999999999999999997766655321000
Q ss_pred hhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEeccCCCCCceEEecCChhHHHH
Q 001335 461 AQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAAL 540 (1097)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al 540 (1097)
...++++...++|+.. +.||.+.|+
T Consensus 325 -----------------------------------------~~~~~ll~~a~~~~~~--------------s~~P~~~AI 349 (673)
T PRK14010 325 -----------------------------------------SSFERLVKAAYESSIA--------------DDTPEGRSI 349 (673)
T ss_pred -----------------------------------------ccHHHHHHHHHHhcCC--------------CCChHHHHH
Confidence 0123455666667532 359999999
Q ss_pred HHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhc
Q 001335 541 VTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLAN 620 (1097)
Q Consensus 541 ~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~ 620 (1097)
++++++.|+.... ......||++++|+|++.+. ++ .+.|||++.++++|..
T Consensus 350 v~~a~~~~~~~~~------------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~ 400 (673)
T PRK14010 350 VKLAYKQHIDLPQ------------------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKE 400 (673)
T ss_pred HHHHHHcCCCchh------------------------hhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhhh
Confidence 9999987653210 01123799999999998753 33 4559999999999986
Q ss_pred CchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeecccc
Q 001335 621 GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKL 700 (1097)
Q Consensus 621 ~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~l 700 (1097)
.+...+..+.+..++++++|+|+++++. |++++|+++++|++
T Consensus 401 ~g~~~~~~~~~~~~~~a~~G~~~l~v~~--------------------------------------~~~~lG~i~l~Dp~ 442 (673)
T PRK14010 401 AGGHIPVDLDALVKGVSKKGGTPLVVLE--------------------------------------DNEILGVIYLKDVI 442 (673)
T ss_pred cCCCCchHHHHHHHHHHhCCCeEEEEEE--------------------------------------CCEEEEEEEeecCC
Confidence 4433444566777889999999998772 67999999999999
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHH
Q 001335 701 QEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELN 780 (1097)
Q Consensus 701 r~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1097)
|+|++++|++||++||+++|+|||++.||.++|+++|+..
T Consensus 443 R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------------------------------- 482 (673)
T PRK14010 443 KDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------------------------------- 482 (673)
T ss_pred cHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------------------------------
Confidence 9999999999999999999999999999999999999931
Q ss_pred HHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCC
Q 001335 781 KCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDG 860 (1097)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 860 (1097)
+++|++|+||.++|+.+|+ .|++|+|+|||
T Consensus 483 -------------------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDG 512 (673)
T PRK14010 483 -------------------------------------------------FVAECKPEDKINVIREEQA-KGHIVAMTGDG 512 (673)
T ss_pred -------------------------------------------------EEcCCCHHHHHHHHHHHHh-CCCEEEEECCC
Confidence 8999999999999999998 79999999999
Q ss_pred CCChhhhhhcCeeEEe-cCccchhhhhhcceeccchHhHHHH-HHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhh
Q 001335 861 ANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQT 938 (1097)
Q Consensus 861 ~ND~~ml~~AdvGIam-~g~e~~~a~~~AD~vi~~~~~l~~l-ll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~ 938 (1097)
.||+|+|++||||||| +|++. |+++||+++.++++-... ++.+||..|.|+++++.|.+..|+.-.+..+.-.|..
T Consensus 513 vNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~ 590 (673)
T PRK14010 513 TNDAPALAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMA 590 (673)
T ss_pred hhhHHHHHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHH
Confidence 9999999999999999 56665 999999999998884333 4889999999999999999999999888877765555
Q ss_pred ccccccchhhHH----------HHHHHHHHh--hHHHHHHhhccccCChhhhhcC
Q 001335 939 GFSGQRFYDDWF----------QSLYNVIFT--SMPVIMLGLFEKDVSASLSKKY 981 (1097)
Q Consensus 939 ~fs~~~~~~~~~----------~~~~n~~~~--~lp~~~l~~~~~d~~~~~~~~~ 981 (1097)
.|.+...+|.+. -+.||-+.. .+|.-.-|+--++.+...++++
T Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
T PRK14010 591 AMPAMNHLNIMHLHSPESAVLSALIFNALIIVLLIPIAMKGVKFKGASTQTILMK 645 (673)
T ss_pred hcccchhhccccCCChHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHhh
Confidence 554433333322 244554332 2344444555555555554443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-73 Score=681.17 Aligned_cols=534 Identities=19% Similarity=0.209 Sum_probs=418.2
Q ss_pred HHhhhhHHHHHHHHhhhcccc-Ccc------cCcccch---hhHHHHHHHHHHHHHHHHHHHhhchhhhc---C-ceEEE
Q 001335 80 EQFRRVANCYFLMISILSTTP-MSP------VNPVTNV---VPLSLVLLVSLIKEAWEDWKRFQNDMTIN---S-TPVEV 145 (1097)
Q Consensus 80 ~qf~~~~n~~fl~~~il~~~~-~~~------~~~~~~~---~~l~~vl~is~~~~~~ed~~r~k~~~~~n---~-~~~~V 145 (1097)
.||++|..+.++++++++++. +.+ ..+...+ +.+++.++++.+.|.+.++|.+++.+.+. + .+++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 588999999999999999864 111 1122222 22333444455556677777776655443 3 36999
Q ss_pred eeCCe-EEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeecccccccCCCChhhhccce
Q 001335 146 LQGQR-WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFK 224 (1097)
Q Consensus 146 ~r~g~-~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~ 224 (1097)
+|+|+ +++++.++|++||+|.|++||.+|||+++++|+ +.||||+|||||.|+.|.+++..
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-----a~VDESaLTGES~PV~K~~G~~~------------- 170 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-----ASVDESAITGESAPVIRESGGDF------------- 170 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-----EEEEcccccCCCCceEeCCCCcc-------------
Confidence 99987 999999999999999999999999999999986 69999999999999999886421
Q ss_pred EEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceee---ccCCCCCcccHHHHHH
Q 001335 225 GEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM---NSMNIPSKRSTLERKL 301 (1097)
Q Consensus 225 ~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~---~~~~~~~k~s~l~~~~ 301 (1097)
..+|+||.+.+|. +.+.|+.+|.+|.+.+ .....+.+++|+|+.+
T Consensus 171 -----------~~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al 218 (679)
T PRK01122 171 -----------SSVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPNEIAL 218 (679)
T ss_pred -----------CeEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHHHHHH
Confidence 1478999988887 9999999999996643 3455667789999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHH
Q 001335 302 DKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIE 381 (1097)
Q Consensus 302 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~ 381 (1097)
+.+...++.+.++++++... +. ||.+. ...+...+.+++.+||++|+..+.
T Consensus 219 ~~l~~~l~~i~l~~~~~~~~-~~-------~~~g~---------------------~~~l~~~iallV~aiP~alg~l~~ 269 (679)
T PRK01122 219 TILLAGLTIIFLLVVATLPP-FA-------AYSGG---------------------ALSITVLVALLVCLIPTTIGGLLS 269 (679)
T ss_pred HHHHHhhhHHHHHHHHHHHH-HH-------HHhCc---------------------hHHHHHHHHHHHHcccchhhhHHH
Confidence 88766665443333322211 11 11100 125677788999999999988877
Q ss_pred HHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEEEEEcceeccCCchhhhhhhh
Q 001335 382 TIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVA 461 (1097)
Q Consensus 382 ~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~ 461 (1097)
++...+ +.++ .++++++|+...+|.||++|+||||||||||+|+|++.+++..+..
T Consensus 270 ~i~i~g-~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~------------- 325 (679)
T PRK01122 270 AIGIAG-MDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV------------- 325 (679)
T ss_pred HHHHHH-HHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC-------------
Confidence 777666 6655 8899999999999999999999999999999999999887531100
Q ss_pred hhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEeccCCCCCceEEecCChhHHHHH
Q 001335 462 QQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALV 541 (1097)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~ 541 (1097)
..++++.+.++|+.. ..||...|++
T Consensus 326 -----------------------------------------~~~~ll~~a~~~s~~--------------s~hP~~~AIv 350 (679)
T PRK01122 326 -----------------------------------------TEEELADAAQLSSLA--------------DETPEGRSIV 350 (679)
T ss_pred -----------------------------------------CHHHHHHHHHHhcCC--------------CCCchHHHHH
Confidence 012355566666443 2589999999
Q ss_pred HHHHH-CCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhc
Q 001335 542 TAAKN-FGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLAN 620 (1097)
Q Consensus 542 ~~a~~-~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~ 620 (1097)
++|++ .|.... ...++..+..||++.+|+|++.+. | ..++|||++.+++.|..
T Consensus 351 ~~a~~~~~~~~~---------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~ 404 (679)
T PRK01122 351 VLAKQRFNLRER---------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVES 404 (679)
T ss_pred HHHHhhcCCCch---------------------hhccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHh
Confidence 99986 343210 112445667899999988887652 3 47899999999999976
Q ss_pred CchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeecccc
Q 001335 621 GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKL 700 (1097)
Q Consensus 621 ~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~l 700 (1097)
.+.+.++.+.+.+++++++|+|++++|+ |++++|+++++|++
T Consensus 405 ~g~~~~~~~~~~~~~~a~~G~~~l~va~--------------------------------------~~~~lG~i~l~D~~ 446 (679)
T PRK01122 405 NGGHFPAELDAAVDEVARKGGTPLVVAE--------------------------------------DNRVLGVIYLKDIV 446 (679)
T ss_pred cCCcChHHHHHHHHHHHhCCCcEEEEEE--------------------------------------CCeEEEEEEEeccC
Confidence 5555567788888999999999999994 67899999999999
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHH
Q 001335 701 QEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELN 780 (1097)
Q Consensus 701 r~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1097)
|+|++++|++||++||+++|+|||++.||.+||+++|+.+
T Consensus 447 R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~---------------------------------------- 486 (679)
T PRK01122 447 KPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---------------------------------------- 486 (679)
T ss_pred chhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE----------------------------------------
Confidence 9999999999999999999999999999999999999931
Q ss_pred HHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCC
Q 001335 781 KCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDG 860 (1097)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 860 (1097)
+++|++|+||.++|+.+|+ .|+.|+|+|||
T Consensus 487 -------------------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDG 516 (679)
T PRK01122 487 -------------------------------------------------FLAEATPEDKLALIRQEQA-EGRLVAMTGDG 516 (679)
T ss_pred -------------------------------------------------EEccCCHHHHHHHHHHHHH-cCCeEEEECCC
Confidence 8999999999999999998 79999999999
Q ss_pred CCChhhhhhcCeeEEe-cCccchhhhhhcceeccchHhHHHH-HHhhhhhhHHHHhHHHHHHHHHHHHH
Q 001335 861 ANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTF 927 (1097)
Q Consensus 861 ~ND~~ml~~AdvGIam-~g~e~~~a~~~AD~vi~~~~~l~~l-ll~~Gr~~~~~i~~~i~~~~~~ni~~ 927 (1097)
.||.|||++||||||| +|++. |+++||+++.++++-... ++.+||.....-..+-.|++.--++-
T Consensus 517 vNDAPALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~~ 583 (679)
T PRK01122 517 TNDAPALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAK 583 (679)
T ss_pred cchHHHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHHH
Confidence 9999999999999999 56666 999999999998884333 48899999977677777777644543
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-73 Score=642.40 Aligned_cols=642 Identities=21% Similarity=0.260 Sum_probs=449.4
Q ss_pred CCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccCcccCcccchhhHHHHHHHHHHHHHHHHHHHhhch
Q 001335 56 LRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQND 135 (1097)
Q Consensus 56 ~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~is~~~~~~ed~~r~k~~ 135 (1097)
.+||+|......+++- +.|.|.-..|+..|+.++..||+.. ..||++++.|++++.+ |+---++|.+..
T Consensus 174 ~~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD---eyWYySlFtLfMli~f----E~tlV~Qrm~~l 242 (1160)
T KOG0209|consen 174 HKYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLIAF----EATLVKQRMRTL 242 (1160)
T ss_pred HHhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH---HHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 3599999998888865 7888888999999999999999975 4577777766555443 344445555554
Q ss_pred hh---hc--CceEEEeeCCeEEEEecccCccCcEEEEcc---CCccCceEEEEeeeCCCceEEEEccccCCcccceeecc
Q 001335 136 MT---IN--STPVEVLQGQRWVSIPWRKLQVGDIVMVKQ---DGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKA 207 (1097)
Q Consensus 136 ~~---~n--~~~~~V~r~g~~~~i~~~~L~vGDII~l~~---ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~ 207 (1097)
.+ +. +..+.|+|+++|+.+..+||.|||+|.|.. +..+|||++||.|| |.|||++|||||.|..|.+
T Consensus 243 se~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-----ciVnEaMLtGESvPl~KE~ 317 (1160)
T KOG0209|consen 243 SEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-----CIVNEAMLTGESVPLMKES 317 (1160)
T ss_pred HHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-----eeechhhhcCCCccccccc
Confidence 43 32 567899999999999999999999999988 67899999999998 9999999999999999999
Q ss_pred cccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEec-CCeEEEEEEEecCccceeec
Q 001335 208 LERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRN-TEYIIGAVIFAGHETKVMMN 286 (1097)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~n-t~~~~gvVv~tG~~Tk~~~~ 286 (1097)
++.-. .+. .+..+.-.++...|.||.+++-..-+ -++++. .+-+.+.|++||.||..+..
T Consensus 318 Ie~~~----~d~------~ld~~~d~k~hVlfGGTkivQht~p~---------~~slk~pDggc~a~VlrTGFeTSQGkL 378 (1160)
T KOG0209|consen 318 IELRD----SDD------ILDIDRDDKLHVLFGGTKIVQHTPPK---------KASLKTPDGGCVAYVLRTGFETSQGKL 378 (1160)
T ss_pred cccCC----hhh------hcccccccceEEEEcCceEEEecCCc---------cccccCCCCCeEEEEEeccccccCCce
Confidence 87442 111 12222333455788888887432100 001111 24489999999999954332
Q ss_pred cC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHHHH
Q 001335 287 SM---NIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFT 363 (1097)
Q Consensus 287 ~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (1097)
.+ -...+-|.= |+-..+++.+++++++++ .+++|.... -++. .+-...|+-
T Consensus 379 vRtilf~aervTaN----n~Etf~FILFLlVFAiaA--a~Yvwv~Gs-----------------kd~~---RsrYKL~Le 432 (1160)
T KOG0209|consen 379 VRTILFSAERVTAN----NRETFIFILFLLVFAIAA--AGYVWVEGS-----------------KDPT---RSRYKLFLE 432 (1160)
T ss_pred eeeEEecceeeeec----cHHHHHHHHHHHHHHHHh--hheEEEecc-----------------cCcc---hhhhheeee
Confidence 22 112221211 122233333344444333 234444321 0111 112345677
Q ss_pred HHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEEEE
Q 001335 364 LITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCS 443 (1097)
Q Consensus 364 ~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~ 443 (1097)
...++...||..||+-++++.... ..-+ ++.++.|..+-.+.-.|+||+.|||||||||+..|.|+++.
T Consensus 433 C~LIlTSVvPpELPmELSmAVNsS-L~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gva 501 (1160)
T KOG0209|consen 433 CTLILTSVVPPELPMELSMAVNSS-LIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVA 501 (1160)
T ss_pred eeEEEeccCCCCCchhhhHHHHHH-HHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEEecc
Confidence 888899999999999777654432 2222 67788888888899999999999999999999999999863
Q ss_pred EcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEeccCC
Q 001335 444 IGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDE 523 (1097)
Q Consensus 444 i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~ 523 (1097)
-....-+ .. .+-++...+-..++|.||+.....++
T Consensus 502 g~~~~~~-~~--------------------------------------------~~~s~~p~~t~~vlAscHsLv~le~~ 536 (1160)
T KOG0209|consen 502 GLSADEG-AL--------------------------------------------TPASKAPNETVLVLASCHSLVLLEDK 536 (1160)
T ss_pred cccCCcc-cc--------------------------------------------cchhhCCchHHHHHHHHHHHHHhcCc
Confidence 2111000 00 01111223457789999999876544
Q ss_pred CCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecC---
Q 001335 524 SPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYAD--- 600 (1097)
Q Consensus 524 ~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~--- 600 (1097)
..|+|.|+|.+++ .||.+...+. +..++ |+ ....+|.+.+.|+|..|||||++....
T Consensus 537 -------lVGDPlEKA~l~~---v~W~~~k~~~--v~p~~------~~--~~~lkI~~ryhFsSaLKRmsvva~~~~~g~ 596 (1160)
T KOG0209|consen 537 -------LVGDPLEKATLEA---VGWNLEKKNS--VCPRE------GN--GKKLKIIQRYHFSSALKRMSVVASHQGPGS 596 (1160)
T ss_pred -------ccCChHHHHHHHh---cCcccccCcc--cCCCc------CC--CcccchhhhhhHHHHHHHHHhhhhcccCCC
Confidence 3589999999986 5666544321 11110 11 235788999999999999999998642
Q ss_pred -CcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 001335 601 -GRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDE 679 (1097)
Q Consensus 601 -~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~ 679 (1097)
-++++.+|||||+|.+++.. .+..+++...+|+++|.|||++|||++..--.++ .| +.
T Consensus 597 s~k~~~aVKGAPEvi~~ml~d----vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q-------------~r----d~ 655 (1160)
T KOG0209|consen 597 SEKYFVAVKGAPEVIQEMLRD----VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQ-------------VR----DL 655 (1160)
T ss_pred ceEEEEEecCCHHHHHHHHHh----CchhHHHHHHHHhhccceEEEEecccccccchhh-------------hh----hh
Confidence 36899999999999999875 5667888889999999999999999997321111 01 12
Q ss_pred HHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCcc-chhc
Q 001335 680 VAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNA-IRDV 758 (1097)
Q Consensus 680 ~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~-~~~~ 758 (1097)
-++.+|+||+|.|++.|..|+|++++++|+.|++++++++|+|||++.||.++|+++|+......++.....+.. ...+
T Consensus 656 ~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w 735 (1160)
T KOG0209|consen 656 KREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEW 735 (1160)
T ss_pred hhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeE
Confidence 347899999999999999999999999999999999999999999999999999999998876554444333211 1111
Q ss_pred ccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChh-HHHHHHhhhccCCceEEEEeCcc
Q 001335 759 EERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPS-LRVILLNLSLNCSSVVCCRVSPL 837 (1097)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~-l~~~f~~l~~~~~~vi~~r~sP~ 837 (1097)
... ++.....+.....+ ...-..+.++++|..++++...+ +...+.+. .||+|++|+
T Consensus 736 ~s~----------d~t~~lp~~p~~~~------~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv------~VfARvaP~ 793 (1160)
T KOG0209|consen 736 VSV----------DGTIVLPLKPGKKK------TLLAETHDLCITGSALDHLQATDQLRRLIPHV------WVFARVAPK 793 (1160)
T ss_pred ecC----------CCceeecCCCCccc------hhhhhhhhhhcchhHHHHHhhhHHHHHhhhhe------eEEEeeChh
Confidence 000 00000000000000 00123456799999999888543 44444443 399999999
Q ss_pred cHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEe-cC
Q 001335 838 QKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SG 878 (1097)
Q Consensus 838 qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam-~g 878 (1097)
||..++..+|+ .|+.|+|||||.||++|||+||||||+ .+
T Consensus 794 QKE~ii~tlK~-~Gy~TLMCGDGTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 794 QKEFIITTLKK-LGYVTLMCGDGTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred hHHHHHHHHHh-cCeEEEEecCCCcchhhhhhcccceehhcC
Confidence 99999999999 899999999999999999999999998 44
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-70 Score=652.91 Aligned_cols=588 Identities=17% Similarity=0.208 Sum_probs=437.4
Q ss_pred HHhhhhHHHHHHHHhhhcccc-Ccc-------c--Ccccch--hhHHHHHHHHHHHHHHHHHHHhhchhhhc---Cc-eE
Q 001335 80 EQFRRVANCYFLMISILSTTP-MSP-------V--NPVTNV--VPLSLVLLVSLIKEAWEDWKRFQNDMTIN---ST-PV 143 (1097)
Q Consensus 80 ~qf~~~~n~~fl~~~il~~~~-~~~-------~--~~~~~~--~~l~~vl~is~~~~~~ed~~r~k~~~~~n---~~-~~ 143 (1097)
.||++|..+.++++++++++. +.+ . .|+... +.+++.+++..+.|.+.++|.+++.+.++ +. .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 588999999999999988764 211 1 244332 22333345555567777777777765554 33 47
Q ss_pred EEee-CCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeecccccccCCCChhhhcc
Q 001335 144 EVLQ-GQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASE 222 (1097)
Q Consensus 144 ~V~r-~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 222 (1097)
+|+| ||++++|+.++|+|||+|.|++||.||||+++++|+ +.||||+|||||.|+.|.+++...
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-----~~VDESaLTGES~PV~K~~g~~~~---------- 172 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-----ASVDESAITGESAPVIKESGGDFA---------- 172 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-----EEEEcccccCCCCceeecCCCCcc----------
Confidence 8885 899999999999999999999999999999999985 799999999999999999865210
Q ss_pred ceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCcccee---eccCCCCCcccHHHH
Q 001335 223 FKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVM---MNSMNIPSKRSTLER 299 (1097)
Q Consensus 223 ~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~---~~~~~~~~k~s~l~~ 299 (1097)
.+|+||.+.+|. +.+.|+.+|.+|.+. .....+..+++|+|.
T Consensus 173 --------------~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~ 217 (675)
T TIGR01497 173 --------------SVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTPNEI 217 (675)
T ss_pred --------------eeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCChHHH
Confidence 368888888777 999999999999653 334566677899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHHHHHHHHhcCcccchhHHH
Q 001335 300 KLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVS 379 (1097)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~ 379 (1097)
.++.+...+.++.+++++ .++.+.. |. . ....+...+.+++.+||++|...
T Consensus 218 ~l~~l~~~l~~v~li~~~---~~~~~~~-----~~---------------~------~~~~~~~lvallV~aiP~aLg~l 268 (675)
T TIGR01497 218 ALTILLIALTLVFLLVTA---TLWPFAA-----YG---------------G------NAISVTVLVALLVCLIPTTIGGL 268 (675)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHH-----hc---------------C------hhHHHHHHHHHHHHhCchhhhhH
Confidence 888876655433332222 1111110 00 0 01135556888999999977655
Q ss_pred HHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEEEEEcceeccCCchhhhhh
Q 001335 380 IETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERG 459 (1097)
Q Consensus 380 l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~ 459 (1097)
...+...+ +.++ .++++++|+...+|.||++|+||||||||||+|+|++.+++..+..
T Consensus 269 ~~av~iag-~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~----------- 326 (675)
T TIGR01497 269 LSAIGIAG-MDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV----------- 326 (675)
T ss_pred HHHHHHHH-HHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC-----------
Confidence 55544445 5544 7899999999999999999999999999999999999987531100
Q ss_pred hhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEeccCCCCCceEEecCChhHHH
Q 001335 460 VAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAA 539 (1097)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~a 539 (1097)
...+++...++|+.. ..||.+.|
T Consensus 327 -------------------------------------------~~~~ll~~aa~~~~~--------------s~hP~a~A 349 (675)
T TIGR01497 327 -------------------------------------------DEKTLADAAQLASLA--------------DDTPEGKS 349 (675)
T ss_pred -------------------------------------------cHHHHHHHHHHhcCC--------------CCCcHHHH
Confidence 112455666666432 35899999
Q ss_pred HHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEEEecchhHHHHHhh
Q 001335 540 LVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLA 619 (1097)
Q Consensus 540 l~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~ 619 (1097)
++++|++.|..... ..++..+..||++.+++|++.+. +| ..+.||+++.+.+.|.
T Consensus 350 iv~~a~~~~~~~~~---------------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~ 404 (675)
T TIGR01497 350 IVILAKQLGIREDD---------------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVE 404 (675)
T ss_pred HHHHHHHcCCCccc---------------------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHH
Confidence 99999987753211 11234567899999877776543 34 4689999999999887
Q ss_pred cCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccc
Q 001335 620 NGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDK 699 (1097)
Q Consensus 620 ~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~ 699 (1097)
..+...++.+.+.+++++++|+|++++|+ |.+++|+++++|+
T Consensus 405 ~~g~~~~~~~~~~~~~~a~~G~r~l~va~--------------------------------------~~~~lG~i~l~D~ 446 (675)
T TIGR01497 405 ANGGHIPTDLDQAVDQVARQGGTPLVVCE--------------------------------------DNRIYGVIYLKDI 446 (675)
T ss_pred hcCCCCcHHHHHHHHHHHhCCCeEEEEEE--------------------------------------CCEEEEEEEeccc
Confidence 65544556778888999999999999996 4689999999999
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHH
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKREL 779 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1097)
+|++++++|++|+++||+++|+|||+..+|.++|+++|+.+
T Consensus 447 ~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~--------------------------------------- 487 (675)
T TIGR01497 447 VKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD--------------------------------------- 487 (675)
T ss_pred chhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE---------------------------------------
Confidence 99999999999999999999999999999999999999831
Q ss_pred HHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEecC
Q 001335 780 NKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGD 859 (1097)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 859 (1097)
+++|++|++|..+|+.+|+ .++.|+|+||
T Consensus 488 --------------------------------------------------v~a~~~PedK~~~v~~lq~-~g~~VamvGD 516 (675)
T TIGR01497 488 --------------------------------------------------FIAEATPEDKIALIRQEQA-EGKLVAMTGD 516 (675)
T ss_pred --------------------------------------------------EEcCCCHHHHHHHHHHHHH-cCCeEEEECC
Confidence 7899999999999999998 6889999999
Q ss_pred CCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHhHHHH-HHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Q 001335 860 GANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQ 937 (1097)
Q Consensus 860 G~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~l~~l-ll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~ 937 (1097)
|.||+|||++||+||+|+ |++. |+++||+++.++++-... ++.+||..+.....+..|++...++-.|..+--.|.
T Consensus 517 G~NDapAL~~AdvGiAm~~gt~~--akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~~ 594 (675)
T TIGR01497 517 GTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAIIPAIFA 594 (675)
T ss_pred CcchHHHHHhCCEeEEeCCCCHH--HHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHHHHHHHHH
Confidence 999999999999999994 4444 899999999998884333 488999999999999999988877765555443333
Q ss_pred hccccccchhhHH----------HHHHHHHHh--hHHHHHHhhccccCChhhhhc
Q 001335 938 TGFSGQRFYDDWF----------QSLYNVIFT--SMPVIMLGLFEKDVSASLSKK 980 (1097)
Q Consensus 938 ~~fs~~~~~~~~~----------~~~~n~~~~--~lp~~~l~~~~~d~~~~~~~~ 980 (1097)
..|.+...+|.+. -+.||-+.. .+|.-.-|+--++.+...+++
T Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (675)
T TIGR01497 595 AAYPQLQALNIMCLHSPDSAILSALIFNALIIPALIPLALKGVSYRPLTASALLR 649 (675)
T ss_pred hhCcchhhhccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHh
Confidence 3333322222221 244554332 234333455445555554444
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-66 Score=621.60 Aligned_cols=477 Identities=32% Similarity=0.455 Sum_probs=397.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhchhhhcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCce
Q 001335 109 NVVPLSLVLLVSLIKEAWEDWKRFQNDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 188 (1097)
Q Consensus 109 ~~~~l~~vl~is~~~~~~ed~~r~k~~~~~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~ 188 (1097)
.+++++..++-...+...++..+...++.+++++++|+|+| ++++++++|+|||+|.+++||.+|||++|++|+
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~----- 76 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS----- 76 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-----
Confidence 34556666666666667777777776766889999999999 999999999999999999999999999999985
Q ss_pred EEEEccccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCC
Q 001335 189 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 268 (1097)
Q Consensus 189 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 268 (1097)
|.||||+|||||.|+.|++++ ..|+|+.+.+|.
T Consensus 77 ~~vdes~LTGEs~pv~k~~g~---------------------------~v~~gs~~~~G~-------------------- 109 (499)
T TIGR01494 77 CFVDESNLTGESVPVLKTAGD---------------------------AVFAGTYVFNGT-------------------- 109 (499)
T ss_pred EEEEcccccCCCCCeeeccCC---------------------------ccccCcEEeccE--------------------
Confidence 899999999999999999865 567888888887
Q ss_pred eEEEEEEEecCccce---eeccCCCCCcccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCcc
Q 001335 269 YIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLI-LALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVE 344 (1097)
Q Consensus 269 ~~~gvVv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~ 344 (1097)
+...|..+|.+|.. ..........+++++++.+++. .++.++.++++++.++.+..+...
T Consensus 110 -~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~--------------- 173 (499)
T TIGR01494 110 -LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWD--------------- 173 (499)
T ss_pred -EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---------------
Confidence 88899999999854 2223334455788999999998 677777777766666554332110
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEE
Q 001335 345 DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYI 424 (1097)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i 424 (1097)
.. .+...+..++.+++.+|||+|+++++++...+ ...+ +++++++|+++.+|+||++|++
T Consensus 174 -----~~----~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~-~~~~----------~~~gilvk~~~~lE~l~~v~~i 233 (499)
T TIGR01494 174 -----PN----SIFKIFLRALILLVIAIPIALPLAVTIALAVG-DARL----------AKKGIVVRSLNALEELGKVDYI 233 (499)
T ss_pred -----cc----cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH-HHHH----------HHCCcEEechhhhhhccCCcEE
Confidence 00 14568999999999999999999999999998 6655 6789999999999999999999
Q ss_pred EecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHH
Q 001335 425 FSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDAC 504 (1097)
Q Consensus 425 ~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 504 (1097)
|||||||||+|+|+|.++++.+.
T Consensus 234 ~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------------------- 256 (499)
T TIGR01494 234 CSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------------------- 256 (499)
T ss_pred EeeCCCccccCceEEEEEEecCC---------------------------------------------------------
Confidence 99999999999999998864321
Q ss_pred HHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeec
Q 001335 505 KEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLE 584 (1097)
Q Consensus 505 ~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~ 584 (1097)
++.++||.|.|++++++..+ +...|
T Consensus 257 ------------------------~~~s~hp~~~ai~~~~~~~~-------------------------------~~~~~ 281 (499)
T TIGR01494 257 ------------------------EYLSGHPDERALVKSAKWKI-------------------------------LNVFE 281 (499)
T ss_pred ------------------------CcCCCChHHHHHHHHhhhcC-------------------------------cceec
Confidence 01257999999999886411 13469
Q ss_pred CCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHH
Q 001335 585 FNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFI 664 (1097)
Q Consensus 585 F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~ 664 (1097)
|++.+++|+++++.+++ .|+||+++.+.++|.. +.+.+++++.+|+|++++|++.
T Consensus 282 f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g~~~~~~a~~~-------------- 336 (499)
T TIGR01494 282 FSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSGLRVLAVASKE-------------- 336 (499)
T ss_pred cCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCCCEEEEEEECC--------------
Confidence 99999999999986443 3689999999988742 2344556889999999999742
Q ss_pred HHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCe
Q 001335 665 QAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK 744 (1097)
Q Consensus 665 ~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~ 744 (1097)
+++|+++++|++|++++++|+.|+++|+++||+|||+..+|..+|+++|+
T Consensus 337 ------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi------ 386 (499)
T TIGR01494 337 ------------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI------ 386 (499)
T ss_pred ------------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc------
Confidence 69999999999999999999999999999999999999999999999874
Q ss_pred EEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhc
Q 001335 745 QFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSL 824 (1097)
Q Consensus 745 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~ 824 (1097)
T Consensus 387 -------------------------------------------------------------------------------- 386 (499)
T TIGR01494 387 -------------------------------------------------------------------------------- 386 (499)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhHH-HHHH
Q 001335 825 NCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLT-DLLL 903 (1097)
Q Consensus 825 ~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l~-~lll 903 (1097)
+++++|+||.++|+.+|+ .|+.|+|+|||.||++|+++|||||+|. |+++||+++.++++.. ..++
T Consensus 387 ------~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~ 453 (499)
T TIGR01494 387 ------FARVTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDAL 453 (499)
T ss_pred ------eeccCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHH
Confidence 367889999999999998 6899999999999999999999999994 6789999999877733 2358
Q ss_pred hhhhhhHHHHhHHHHHHHHHHHHHHHHHHHH
Q 001335 904 VHGRWSYLRICKVVLYFFYKNLTFTLTQFWF 934 (1097)
Q Consensus 904 ~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~ 934 (1097)
.+||++++++++++.|.+++|+..+...+++
T Consensus 454 ~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 454 KEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999977766653
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-67 Score=582.26 Aligned_cols=605 Identities=19% Similarity=0.221 Sum_probs=459.2
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhcccc----CcccCcccchhhHHHHHHHHHHHHHHH
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP----MSPVNPVTNVVPLSLVLLVSLIKEAWE 127 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~----~~~~~~~~~~~~l~~vl~is~~~~~~e 127 (1097)
++|++.||.|++...|-+.+ +.|+--|..|..|..-.++++.... -.|-+|..... ++.++++++...++|
T Consensus 43 ~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~g-I~~LLliNsti~Fve 117 (942)
T KOG0205|consen 43 EERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVG-ICCLLLINSTISFIE 117 (942)
T ss_pred HHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhh-hheeeeecceeeeee
Confidence 45889999999999888876 6777888899999988888887653 12335555544 334556666667778
Q ss_pred HHHHhhchhhhc---CceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCccccee
Q 001335 128 DWKRFQNDMTIN---STPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKI 204 (1097)
Q Consensus 128 d~~r~k~~~~~n---~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~ 204 (1097)
+++.-..-.++. ..++.|+|||+|.++..+.|+||||+.++.|+.+|||++||.+.- +.||+|.|||||.|+.
T Consensus 118 E~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD~----LkiDQSAlTGESLpvt 193 (942)
T KOG0205|consen 118 ENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGDP----LKIDQSALTGESLPVT 193 (942)
T ss_pred ccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceecCCc----cccchhhhcCCccccc
Confidence 777665533332 578999999999999999999999999999999999999999884 7899999999999999
Q ss_pred ecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCcccee
Q 001335 205 RKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVM 284 (1097)
Q Consensus 205 K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~ 284 (1097)
|.+++ .+|+|+.+-+|+ +.+||+.||..|-.+
T Consensus 194 Kh~gd---------------------------~vfSgSTcKqGE---------------------~eaVViATg~~TF~G 225 (942)
T KOG0205|consen 194 KHPGD---------------------------EVFSGSTCKQGE---------------------IEAVVIATGVHTFFG 225 (942)
T ss_pred cCCCC---------------------------ceecccccccce---------------------EEEEEEEeccceeeh
Confidence 99988 778998888888 999999999999776
Q ss_pred eccC--CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHHH
Q 001335 285 MNSM--NIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMF 362 (1097)
Q Consensus 285 ~~~~--~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (1097)
+... .......++++.++.+-.++++. +++.+++-+...++.... - .-...-
T Consensus 226 kAA~LVdst~~~GHFqkVLt~IGn~ci~s-i~~g~lie~~vmy~~q~R-~------------------------~r~~i~ 279 (942)
T KOG0205|consen 226 KAAHLVDSTNQVGHFQKVLTGIGNFCICS-IALGMLIEITVMYPIQHR-L------------------------YRDGID 279 (942)
T ss_pred hhHHhhcCCCCcccHHHHHHhhhhHHHHH-HHHHHHHHHHhhhhhhhh-h------------------------hhhhhh
Confidence 5432 23556788999999887665433 333333322222222111 0 111233
Q ss_pred HHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEE-
Q 001335 363 TLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFK- 441 (1097)
Q Consensus 363 ~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~- 441 (1097)
+.+++++.-||+++|..++...+++ +.++ ++++++++...++|+|+.+|++|||||||||.|++.+.+
T Consensus 280 nLlvllIGgiPiamPtVlsvTMAiG-s~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdkn 348 (942)
T KOG0205|consen 280 NLLVLLIGGIPIAMPTVLSVTMAIG-SHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKN 348 (942)
T ss_pred heheeeecccccccceeeeehhhHH-HHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcC
Confidence 4456666679999999998888898 7777 889999999999999999999999999999999999865
Q ss_pred ---EEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceE
Q 001335 442 ---CSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVL 518 (1097)
Q Consensus 442 ---~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~ 518 (1097)
++..|.. + ....++.|+|. .
T Consensus 349 l~ev~v~gv~----------------------------------------------------~-D~~~L~A~rAs----r 371 (942)
T KOG0205|consen 349 LIEVFVKGVD----------------------------------------------------K-DDVLLTAARAS----R 371 (942)
T ss_pred cceeeecCCC----------------------------------------------------h-HHHHHHHHHHh----h
Confidence 2222211 0 00112222322 1
Q ss_pred eccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEe
Q 001335 519 PEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRY 598 (1097)
Q Consensus 519 ~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~ 598 (1097)
. +..+..|.|++...++- +.....|+.++.+|||+..||....+.+
T Consensus 372 ~-----------en~DAID~A~v~~L~dP-----------------------Keara~ikevhF~PFnPV~Krta~ty~d 417 (942)
T KOG0205|consen 372 K-----------ENQDAIDAAIVGMLADP-----------------------KEARAGIKEVHFLPFNPVDKRTALTYID 417 (942)
T ss_pred h-----------cChhhHHHHHHHhhcCH-----------------------HHHhhCceEEeeccCCccccceEEEEEC
Confidence 1 13578899999876531 0024568999999999999999999999
Q ss_pred cCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 001335 599 ADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLD 678 (1097)
Q Consensus 599 ~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~ 678 (1097)
++|+.+-.+||||+.|++.|+... +.+++..+.+++||+.|+|.|++|++..++..-
T Consensus 418 ~dG~~~r~sKGAPeqil~l~~~~~-~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~---------------------- 474 (942)
T KOG0205|consen 418 PDGNWHRVSKGAPEQILKLCNEDH-DIPERVHSIIDKFAERGLRSLAVARQEVPEKTK---------------------- 474 (942)
T ss_pred CCCCEEEecCCChHHHHHHhhccC-cchHHHHHHHHHHHHhcchhhhhhhhccccccc----------------------
Confidence 999999999999999999998754 588899999999999999999999988775320
Q ss_pred HHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhc
Q 001335 679 EVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDV 758 (1097)
Q Consensus 679 ~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~ 758 (1097)
+.-....+++|+.-+-||+|.+..++|+....-|..|.|+|||...-++..++.+|+-.+-.+- .+....
T Consensus 475 ---~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyps-------s~llG~ 544 (942)
T KOG0205|consen 475 ---ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS-------SALLGL 544 (942)
T ss_pred ---cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCc-------hhhccC
Confidence 1123467899999999999999999999999999999999999999999999999985432110 000000
Q ss_pred ccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCccc
Q 001335 759 EERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQ 838 (1097)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~q 838 (1097)
.+.+ -+.|..... +.+ ++.-|+.+.|++
T Consensus 545 ~~~~--------------------------------------~~~~~~v~e---------lie-----~adgfAgVfpeh 572 (942)
T KOG0205|consen 545 GKDG--------------------------------------SMPGSPVDE---------LIE-----KADGFAGVFPEH 572 (942)
T ss_pred CCCC--------------------------------------CCCCCcHHH---------Hhh-----hccCccccCHHH
Confidence 0000 000111110 011 122788899999
Q ss_pred HHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhHHHH-HHhhhhhhHHHHhHHH
Q 001335 839 KAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRWSYLRICKVV 917 (1097)
Q Consensus 839 K~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l~~l-ll~~Gr~~~~~i~~~i 917 (1097)
|.++|+.+|+ .++.++|.|||+||.|+++.||+||++.++-.. |..+||+++......... .+..+|.+|+|++.+.
T Consensus 573 Ky~iV~~Lq~-r~hi~gmtgdgvndapaLKkAdigiava~atda-ar~asdiVltepglSviI~avltSraIfqrmknyt 650 (942)
T KOG0205|consen 573 KYEIVKILQE-RKHIVGMTGDGVNDAPALKKADIGIAVADATDA-ARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 650 (942)
T ss_pred HHHHHHHHhh-cCceecccCCCcccchhhcccccceeeccchhh-hcccccEEEcCCCchhhHHHHHHHHHHHHHHhhhe
Confidence 9999999999 799999999999999999999999999655443 789999999998774433 4778999999999999
Q ss_pred HHHHHHHHHHH
Q 001335 918 LYFFYKNLTFT 928 (1097)
Q Consensus 918 ~~~~~~ni~~~ 928 (1097)
.|.+.-.+-+.
T Consensus 651 iyavsitiriv 661 (942)
T KOG0205|consen 651 IYAVSITIRIV 661 (942)
T ss_pred eeeehhHHHHH
Confidence 88876665443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-62 Score=584.59 Aligned_cols=492 Identities=20% Similarity=0.242 Sum_probs=397.9
Q ss_pred HHHHHHHHHHHHHHHHHhhchhh------hcCceEEEee-CCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCc
Q 001335 115 LVLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQ-GQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADG 187 (1097)
Q Consensus 115 ~vl~is~~~~~~ed~~r~k~~~~------~n~~~~~V~r-~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g 187 (1097)
+++++-.+.+++|++.+.|+.+. +.++++++++ ||+.++++.++|+|||+|.|++||+||+|+++++|+
T Consensus 179 ~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~---- 254 (713)
T COG2217 179 MLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGS---- 254 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCc----
Confidence 34445556688888888886443 3478897776 455999999999999999999999999999999988
Q ss_pred eEEEEccccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecC
Q 001335 188 VCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNT 267 (1097)
Q Consensus 188 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt 267 (1097)
..||||+|||||.|+.|.+++ .+|+||++.+|.
T Consensus 255 -s~vDeS~iTGEs~PV~k~~Gd---------------------------~V~aGtiN~~G~------------------- 287 (713)
T COG2217 255 -SSVDESMLTGESLPVEKKPGD---------------------------EVFAGTVNLDGS------------------- 287 (713)
T ss_pred -EEeecchhhCCCCCEecCCCC---------------------------EEeeeEEECCcc-------------------
Confidence 489999999999999999988 889999999998
Q ss_pred CeEEEEEEEecCccce---eeccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCcc
Q 001335 268 EYIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVE 344 (1097)
Q Consensus 268 ~~~~gvVv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~ 344 (1097)
+...|+.+|.||.+ .+...+++..|+++|+..|++..++.++.++++++++++|.++...
T Consensus 288 --l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~--------------- 350 (713)
T COG2217 288 --LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--------------- 350 (713)
T ss_pred --EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC---------------
Confidence 99999999999965 4455678889999999999999999999999998888766544321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEE
Q 001335 345 DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYI 424 (1097)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i 424 (1097)
.+...+..++.+++..|||+|.++.+.+.+.. .... +++++++|+.+.+|.|+++|++
T Consensus 351 -----------~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g-~g~a----------A~~GILiK~g~~LE~l~~v~tv 408 (713)
T COG2217 351 -----------DWETALYRALAVLVIACPCALGLATPTAILVG-IGRA----------ARRGILIKGGEALERLAKVDTV 408 (713)
T ss_pred -----------cHHHHHHHHHhheeeeCccHHHhHHHHHHHHH-HHHH----------HhCceEEeChHHHHhhccCCEE
Confidence 14457899999999999999999999988887 6555 8899999999999999999999
Q ss_pred EecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHH
Q 001335 425 FSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDAC 504 (1097)
Q Consensus 425 ~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 504 (1097)
+||||||||+|+|++..+...+. + .
T Consensus 409 vFDKTGTLT~G~p~v~~v~~~~~------~-------------------------------------------------e 433 (713)
T COG2217 409 VFDKTGTLTEGKPEVTDVVALDG------D-------------------------------------------------E 433 (713)
T ss_pred EEeCCCCCcCCceEEEEEecCCC------C-------------------------------------------------H
Confidence 99999999999999998754221 0 0
Q ss_pred HHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeec
Q 001335 505 KEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLE 584 (1097)
Q Consensus 505 ~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~ 584 (1097)
.+++...+.- +-.++||..+|++++|++.|..-. ..+ ..+|
T Consensus 434 ~~~L~laAal--------------E~~S~HPiA~AIv~~a~~~~~~~~----------------------~~~---~~i~ 474 (713)
T COG2217 434 DELLALAAAL--------------EQHSEHPLAKAIVKAAAERGLPDV----------------------EDF---EEIP 474 (713)
T ss_pred HHHHHHHHHH--------------HhcCCChHHHHHHHHHHhcCCCCc----------------------cce---eeec
Confidence 1222222211 123689999999999988762110 001 1111
Q ss_pred CCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHH
Q 001335 585 FNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFI 664 (1097)
Q Consensus 585 F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~ 664 (1097)
..+|.-+-.+..+.+ |++..+.+.-.. ... ..+..+.+..+|..++.++.
T Consensus 475 ------G~Gv~~~v~g~~v~v---G~~~~~~~~~~~----~~~-~~~~~~~~~~~G~t~v~va~---------------- 524 (713)
T COG2217 475 ------GRGVEAEVDGERVLV---GNARLLGEEGID----LPL-LSERIEALESEGKTVVFVAV---------------- 524 (713)
T ss_pred ------cCcEEEEECCEEEEE---cCHHHHhhcCCC----ccc-hhhhHHHHHhcCCeEEEEEE----------------
Confidence 112222222334444 998776542111 111 45567788889998888885
Q ss_pred HHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCe
Q 001335 665 QAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK 744 (1097)
Q Consensus 665 ~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~ 744 (1097)
|-+++|+++++|++|++++++|++|++.||++.|+|||+..+|..+|+++||..
T Consensus 525 ----------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~---- 578 (713)
T COG2217 525 ----------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE---- 578 (713)
T ss_pred ----------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh----
Confidence 669999999999999999999999999999999999999999999999999931
Q ss_pred EEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhc
Q 001335 745 QFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSL 824 (1097)
Q Consensus 745 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~ 824 (1097)
T Consensus 579 -------------------------------------------------------------------------------- 578 (713)
T COG2217 579 -------------------------------------------------------------------------------- 578 (713)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEe-cCccchhhhhhcceeccchHhHHHH-H
Q 001335 825 NCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-L 902 (1097)
Q Consensus 825 ~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam-~g~e~~~a~~~AD~vi~~~~~l~~l-l 902 (1097)
+.+.+.|++|.++|+.+|+ .|++|+|+|||.||.|+|.+|||||+| +|++. |+++||+++++++...-. +
T Consensus 579 -----v~AellPedK~~~V~~l~~-~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~eaADvvL~~~dL~~v~~a 650 (713)
T COG2217 579 -----VRAELLPEDKAEIVRELQA-EGRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEAADVVLMRDDLSAVPEA 650 (713)
T ss_pred -----heccCCcHHHHHHHHHHHh-cCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHhCCEEEecCCHHHHHHH
Confidence 8899999999999999998 789999999999999999999999999 56776 999999999998773322 4
Q ss_pred HhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHH
Q 001335 903 LVHGRWSYLRICKVVLYFFYKNLTFTLTQFWF 934 (1097)
Q Consensus 903 l~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~ 934 (1097)
+..+|..++++++++.|.|.+|.+++.+..+.
T Consensus 651 i~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 651 IDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999887666654
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-61 Score=593.89 Aligned_cols=485 Identities=20% Similarity=0.233 Sum_probs=384.5
Q ss_pred HHHHHHHHHHHHHHHHHhhchhh------hcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCce
Q 001335 115 LVLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 188 (1097)
Q Consensus 115 ~vl~is~~~~~~ed~~r~k~~~~------~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~ 188 (1097)
+++++..+.+.+|.+.++|+.+. +.+.+++|+|||++++++.++|+|||+|.|++||.||||+++++++
T Consensus 211 ~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~----- 285 (741)
T PRK11033 211 MVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPF----- 285 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECc-----
Confidence 34444556677787777776443 3478899999999999999999999999999999999999999987
Q ss_pred EEEEccccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCC
Q 001335 189 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 268 (1097)
Q Consensus 189 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 268 (1097)
+.||||+|||||.|+.|.+++ .+|+|+++.+|.
T Consensus 286 ~~vdes~lTGEs~Pv~k~~Gd---------------------------~V~aGt~~~~G~-------------------- 318 (741)
T PRK11033 286 ASFDESALTGESIPVERATGE---------------------------KVPAGATSVDRL-------------------- 318 (741)
T ss_pred EEeecccccCCCCCEecCCCC---------------------------eeccCCEEcCce--------------------
Confidence 689999999999999999876 789999999988
Q ss_pred eEEEEEEEecCcccee---eccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccC
Q 001335 269 YIIGAVIFAGHETKVM---MNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVED 345 (1097)
Q Consensus 269 ~~~gvVv~tG~~Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~ 345 (1097)
+.+.|+.+|.+|.+. +...+...+++|+|+.+|++..++.+++++++++.++++.++...
T Consensus 319 -~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~---------------- 381 (741)
T PRK11033 319 -VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA---------------- 381 (741)
T ss_pred -EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC----------------
Confidence 999999999999653 344566778899999999999999999999998887776333211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEE
Q 001335 346 DQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIF 425 (1097)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~ 425 (1097)
.+...+..++.+++..|||+|.++.+++.... .... +++++++|+.+.+|.|+++|+||
T Consensus 382 ----------~~~~~i~~a~svlviacPcaL~latP~a~~~~-l~~a----------ar~gilik~~~alE~l~~v~~v~ 440 (741)
T PRK11033 382 ----------PWQEWIYRGLTLLLIGCPCALVISTPAAITSG-LAAA----------ARRGALIKGGAALEQLGRVTTVA 440 (741)
T ss_pred ----------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHH-HHHH----------HHCCeEEcCcHHHHHhhCCCEEE
Confidence 12345778899999999999966666655554 3333 77899999999999999999999
Q ss_pred ecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHH
Q 001335 426 SDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACK 505 (1097)
Q Consensus 426 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 505 (1097)
||||||||+|+|++.++...+.. . ..
T Consensus 441 fDKTGTLT~g~~~v~~~~~~~~~---------------------------------------------------~---~~ 466 (741)
T PRK11033 441 FDKTGTLTEGKPQVTDIHPATGI---------------------------------------------------S---ES 466 (741)
T ss_pred EeCCCCCcCCceEEEEEEecCCC---------------------------------------------------C---HH
Confidence 99999999999999987532110 0 01
Q ss_pred HHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecC
Q 001335 506 EFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEF 585 (1097)
Q Consensus 506 ~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F 585 (1097)
+++...+... ..+.||.+.|+++++++.|.. +||
T Consensus 467 ~~l~~aa~~e--------------~~s~hPia~Ai~~~a~~~~~~--------------------------------~~~ 500 (741)
T PRK11033 467 ELLALAAAVE--------------QGSTHPLAQAIVREAQVRGLA--------------------------------IPE 500 (741)
T ss_pred HHHHHHHHHh--------------cCCCCHHHHHHHHHHHhcCCC--------------------------------CCC
Confidence 2222222110 124799999999999875532 244
Q ss_pred CCCCceEEE-EEE-ecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHH
Q 001335 586 NSTRKRQSV-VCR-YADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKF 663 (1097)
Q Consensus 586 ~s~rkrmsv-iv~-~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~ 663 (1097)
.++++.+.- -++ .-+|+.+. -|+++.+.+ ..+...+.++++..+|.|++++|+
T Consensus 501 ~~~~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~--------~~~~~~~~~~~~~~~g~~~v~va~--------------- 555 (741)
T PRK11033 501 AESQRALAGSGIEGQVNGERVL--ICAPGKLPP--------LADAFAGQINELESAGKTVVLVLR--------------- 555 (741)
T ss_pred CcceEEEeeEEEEEEECCEEEE--Eecchhhhh--------ccHHHHHHHHHHHhCCCEEEEEEE---------------
Confidence 455554421 121 12343222 388887744 112344556788999999999996
Q ss_pred HHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCC
Q 001335 664 IQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEM 743 (1097)
Q Consensus 664 ~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~ 743 (1097)
|.+++|+++++|++|++++++|+.|++.|++++|+|||+..+|..+|+++||.
T Consensus 556 -----------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---- 608 (741)
T PRK11033 556 -----------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---- 608 (741)
T ss_pred -----------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----
Confidence 66899999999999999999999999999999999999999999999999982
Q ss_pred eEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhh
Q 001335 744 KQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLS 823 (1097)
Q Consensus 744 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~ 823 (1097)
T Consensus 609 -------------------------------------------------------------------------------- 608 (741)
T PRK11033 609 -------------------------------------------------------------------------------- 608 (741)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHh--HHH
Q 001335 824 LNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRF--LTD 900 (1097)
Q Consensus 824 ~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~--l~~ 900 (1097)
.+++..|++|..+|+.+++ ++.|+|+|||.||.+||++|||||+|+ +++. ++++||+++.+.++ +..
T Consensus 609 ------~~~~~~p~~K~~~v~~l~~--~~~v~mvGDgiNDapAl~~A~vgia~g~~~~~--a~~~adivl~~~~l~~l~~ 678 (741)
T PRK11033 609 ------FRAGLLPEDKVKAVTELNQ--HAPLAMVGDGINDAPAMKAASIGIAMGSGTDV--ALETADAALTHNRLRGLAQ 678 (741)
T ss_pred ------eecCCCHHHHHHHHHHHhc--CCCEEEEECCHHhHHHHHhCCeeEEecCCCHH--HHHhCCEEEecCCHHHHHH
Confidence 3355789999999999986 358999999999999999999999994 4444 88999999998777 443
Q ss_pred HHHhhhhhhHHHHhHHHHHHHHHHHHHHHHHH
Q 001335 901 LLLVHGRWSYLRICKVVLYFFYKNLTFTLTQF 932 (1097)
Q Consensus 901 lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~ 932 (1097)
++..||..++++++++.|.+.+|++++.+.+
T Consensus 679 -~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 679 -MIELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4889999999999999999999987655544
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-59 Score=565.58 Aligned_cols=486 Identities=20% Similarity=0.246 Sum_probs=380.7
Q ss_pred HHHHHHHHHHhhchhh------hcCceEEEeeCC-eEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEcc
Q 001335 122 IKEAWEDWKRFQNDMT------INSTPVEVLQGQ-RWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETA 194 (1097)
Q Consensus 122 ~~~~~ed~~r~k~~~~------~n~~~~~V~r~g-~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes 194 (1097)
+..+++.+.++|+.+. .++.+++|+|+| +++++++++|+|||+|.|++||.+|||++|++|+ +.||||
T Consensus 30 ~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g~-----~~vdes 104 (556)
T TIGR01525 30 LGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGE-----SEVDES 104 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEecc-----eEEeeh
Confidence 3345555555554443 346789999995 9999999999999999999999999999999986 789999
Q ss_pred ccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEE
Q 001335 195 NLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAV 274 (1097)
Q Consensus 195 ~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvV 274 (1097)
+|||||.|+.|.+++ .+|+||.+.+|. +.++|
T Consensus 105 ~lTGEs~pv~k~~g~---------------------------~v~aGt~v~~g~---------------------~~~~v 136 (556)
T TIGR01525 105 ALTGESMPVEKKEGD---------------------------EVFAGTINGDGS---------------------LTIRV 136 (556)
T ss_pred hccCCCCCEecCCcC---------------------------EEeeceEECCce---------------------EEEEE
Confidence 999999999998765 789999998888 99999
Q ss_pred EEecCccceeec---cCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCC
Q 001335 275 IFAGHETKVMMN---SMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPD 351 (1097)
Q Consensus 275 v~tG~~Tk~~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 351 (1097)
+.||.+|.+.+. ......+++++++.++++..++.++.+++++++++.+.+...
T Consensus 137 ~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~----------------------- 193 (556)
T TIGR01525 137 TKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA----------------------- 193 (556)
T ss_pred EEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------------
Confidence 999999976543 334566789999999999999999888888887766543211
Q ss_pred hhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCc
Q 001335 352 KRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGT 431 (1097)
Q Consensus 352 ~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGT 431 (1097)
. ..+..++.+++..||++|+++++++.... ...+ +++++++|+++.+|.||++|++|||||||
T Consensus 194 -----~-~~~~~~~~vlv~~~P~al~l~~~~~~~~~-~~~~----------~~~gilvk~~~~le~l~~v~~i~fDKTGT 256 (556)
T TIGR01525 194 -----L-GALYRALAVLVVACPCALGLATPVAILVA-IGVA----------ARRGILIKGGDALEKLAKVKTVVFDKTGT 256 (556)
T ss_pred -----c-hHHHHHHHHHhhccccchhehhHHHHHHH-HHHH----------HHCCceecCchHHHHhhcCCEEEEeCCCC
Confidence 0 46788999999999999999999998887 6665 78999999999999999999999999999
Q ss_pred eeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHh
Q 001335 432 LTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCL 511 (1097)
Q Consensus 432 LT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 511 (1097)
||+|+|++.++...+... . ...+++...
T Consensus 257 LT~~~~~v~~~~~~~~~~--------------------------------------------------~--~~~~~l~~a 284 (556)
T TIGR01525 257 LTTGKPTVVDVEPLDDAS--------------------------------------------------I--SEEELLALA 284 (556)
T ss_pred CcCCceEEEEEEecCCCC--------------------------------------------------c--cHHHHHHHH
Confidence 999999999886432110 0 011222222
Q ss_pred hcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCce
Q 001335 512 AICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKR 591 (1097)
Q Consensus 512 alc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkr 591 (1097)
+.+.. ...||.+.|+++++++.|..... + ++ ...+ ..++
T Consensus 285 ~~~e~--------------~~~hp~~~Ai~~~~~~~~~~~~~--~--------------------~~-~~~~----~~~g 323 (556)
T TIGR01525 285 AALEQ--------------SSSHPLARAIVRYAKKRGLELPK--Q--------------------ED-VEEV----PGKG 323 (556)
T ss_pred HHHhc--------------cCCChHHHHHHHHHHhcCCCccc--c--------------------cC-eeEe----cCCe
Confidence 22211 14699999999999987653211 0 00 0000 1223
Q ss_pred EEEEEEecC-CcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhh
Q 001335 592 QSVVCRYAD-GRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSL 670 (1097)
Q Consensus 592 msviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~ 670 (1097)
++..++ + .++. .|+++.+ + .. ... .....+.+++++++|+|++.++.
T Consensus 324 i~~~~~--g~~~~~---lg~~~~~-~-~~--~~~-~~~~~~~~~~~~~~g~~~~~v~~---------------------- 371 (556)
T TIGR01525 324 VEATVD--GQEEVR---IGNPRLL-E-LA--AEP-ISASPDLLNEGESQGKTVVFVAV---------------------- 371 (556)
T ss_pred EEEEEC--CeeEEE---EecHHHH-h-hc--CCC-chhhHHHHHHHhhCCcEEEEEEE----------------------
Confidence 333321 2 1333 3887765 1 11 111 12234567788999999999984
Q ss_pred hhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcC-CeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEe
Q 001335 671 RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAG-IKIWVLTGDKMETAINIAYACNLINNEMKQFIIT 749 (1097)
Q Consensus 671 ~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aG-Ikv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~ 749 (1097)
|.+++|.+.++|+++|+++++|+.|+++| ++++|+|||+..++..+++++|+..
T Consensus 372 ----------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~--------- 426 (556)
T TIGR01525 372 ----------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE--------- 426 (556)
T ss_pred ----------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe---------
Confidence 66999999999999999999999999999 9999999999999999999999821
Q ss_pred cCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCce
Q 001335 750 SETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSV 829 (1097)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~v 829 (1097)
T Consensus 427 -------------------------------------------------------------------------------- 426 (556)
T TIGR01525 427 -------------------------------------------------------------------------------- 426 (556)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh--HHHHHHhhhh
Q 001335 830 VCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF--LTDLLLVHGR 907 (1097)
Q Consensus 830 i~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~--l~~lll~~Gr 907 (1097)
+|+++.|++|..+++.++. .++.|+|+|||.||++|+++||+||++++ ....++..||+++.+.++ +..+ +..||
T Consensus 427 ~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~-~~~~~~~~Ad~vi~~~~~~~l~~~-i~~~r 503 (556)
T TIGR01525 427 VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPALAAADVGIAMGA-GSDVAIEAADIVLLNDDLSSLPTA-IDLSR 503 (556)
T ss_pred eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHHhhCCEeEEeCC-CCHHHHHhCCEEEeCCCHHHHHHH-HHHHH
Confidence 7778899999999999997 67899999999999999999999999953 233378899999997666 5555 88999
Q ss_pred hhHHHHhHHHHHHHHHHHHHHHHHHH
Q 001335 908 WSYLRICKVVLYFFYKNLTFTLTQFW 933 (1097)
Q Consensus 908 ~~~~~i~~~i~~~~~~ni~~~~~~~~ 933 (1097)
..++++++++.|.+.+|++.+...++
T Consensus 504 ~~~~~i~~nl~~a~~~N~~~i~~a~~ 529 (556)
T TIGR01525 504 KTRRIIKQNLAWALGYNLVAIPLAAG 529 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988655543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-59 Score=546.01 Aligned_cols=504 Identities=19% Similarity=0.194 Sum_probs=401.3
Q ss_pred HHHHHHHHHHHhhchh------hhcCceEEEeeCCe-EEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEc
Q 001335 121 LIKEAWEDWKRFQNDM------TINSTPVEVLQGQR-WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIET 193 (1097)
Q Consensus 121 ~~~~~~ed~~r~k~~~------~~n~~~~~V~r~g~-~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vde 193 (1097)
++.+.+|...++|+.. .+.++++.++.+|+ .++|+.+.|++||+|+|.+|++||+|+++++|+ ++|||
T Consensus 352 ~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gs-----s~VDE 426 (951)
T KOG0207|consen 352 TLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGS-----SEVDE 426 (951)
T ss_pred HHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCc-----eeech
Confidence 4457778777777643 34578999999986 899999999999999999999999999999998 79999
Q ss_pred cccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEE
Q 001335 194 ANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGA 273 (1097)
Q Consensus 194 s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gv 273 (1097)
|.+|||+.|+.|++++ .+.+|+++.+|. .+.-
T Consensus 427 s~iTGEs~PV~Kk~gs---------------------------~ViaGsiN~nG~---------------------l~Vk 458 (951)
T KOG0207|consen 427 SLITGESMPVPKKKGS---------------------------TVIAGSINLNGT---------------------LLVK 458 (951)
T ss_pred hhccCCceecccCCCC---------------------------eeeeeeecCCce---------------------EEEE
Confidence 9999999999999987 788999999988 9999
Q ss_pred EEEecCccce---eeccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCC
Q 001335 274 VIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNP 350 (1097)
Q Consensus 274 Vv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 350 (1097)
++.+|.||.+ .+...+++..+.|+|+..|++..++.++++++++.++++|.+......||-
T Consensus 459 aT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~---------------- 522 (951)
T KOG0207|consen 459 ATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYP---------------- 522 (951)
T ss_pred EEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCc----------------
Confidence 9999999965 455567888899999999999999999999999999998887665343331
Q ss_pred ChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCC
Q 001335 351 DKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTG 430 (1097)
Q Consensus 351 ~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTG 430 (1097)
...+..+...|..++.+++.+|||+|.++.+.+.+.+ ..-- +.+|+++|..+.+|.+.+|++|.|||||
T Consensus 523 ~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmva-tgvg----------A~nGvLIKGge~LE~~hkv~tVvFDKTG 591 (951)
T KOG0207|consen 523 RSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVA-TGVG----------ATNGVLIKGGEALEKAHKVKTVVFDKTG 591 (951)
T ss_pred chhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEE-echh----------hhcceEEcCcHHHHHHhcCCEEEEcCCC
Confidence 1222345678889999999999999988877765554 2222 7799999999999999999999999999
Q ss_pred ceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHH
Q 001335 431 TLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRC 510 (1097)
Q Consensus 431 TLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 510 (1097)
|||+|++.+.++.+-+.. -..++++..
T Consensus 592 TLT~G~~~V~~~~~~~~~-----------------------------------------------------~~~~e~l~~ 618 (951)
T KOG0207|consen 592 TLTEGKPTVVDFKSLSNP-----------------------------------------------------ISLKEALAL 618 (951)
T ss_pred ceecceEEEEEEEecCCc-----------------------------------------------------ccHHHHHHH
Confidence 999999999988654321 012223322
Q ss_pred hhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCc
Q 001335 511 LAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRK 590 (1097)
Q Consensus 511 lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rk 590 (1097)
.+.- +-.++||...|++++|++.+-. ++. -.++..-.|..+.+
T Consensus 619 v~a~--------------Es~SeHPig~AIv~yak~~~~~-----~~~------------------~~~~~~~~~pg~g~ 661 (951)
T KOG0207|consen 619 VAAM--------------ESGSEHPIGKAIVDYAKEKLVE-----PNP------------------EGVLSFEYFPGEGI 661 (951)
T ss_pred HHHH--------------hcCCcCchHHHHHHHHHhcccc-----cCc------------------cccceeecccCCCc
Confidence 2211 1125799999999999987611 100 01111122222222
Q ss_pred eEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhh
Q 001335 591 RQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSL 670 (1097)
Q Consensus 591 rmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~ 670 (1097)
...+.+. ..++.+ |.-+.|... +....+.+++.+++-..+|..+.++|.
T Consensus 662 ~~~~~~~--~~~i~i---GN~~~~~r~----~~~~~~~i~~~~~~~e~~g~tvv~v~v---------------------- 710 (951)
T KOG0207|consen 662 YVTVTVD--GNEVLI---GNKEWMSRN----GCSIPDDILDALTESERKGQTVVYVAV---------------------- 710 (951)
T ss_pred ccceEEe--eeEEee---chHHHHHhc----CCCCchhHHHhhhhHhhcCceEEEEEE----------------------
Confidence 2222222 222333 776555332 222344577778888899999999996
Q ss_pred hhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEec
Q 001335 671 RDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITS 750 (1097)
Q Consensus 671 ~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~ 750 (1097)
|-++.|+++++|++|+|+..+|+.|++.||++.|+||||..+|.++|+++|+.
T Consensus 711 ----------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~----------- 763 (951)
T KOG0207|consen 711 ----------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID----------- 763 (951)
T ss_pred ----------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc-----------
Confidence 77999999999999999999999999999999999999999999999999952
Q ss_pred CCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceE
Q 001335 751 ETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVV 830 (1097)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi 830 (1097)
.|
T Consensus 764 ------------------------------------------------------------------------------~V 765 (951)
T KOG0207|consen 764 ------------------------------------------------------------------------------NV 765 (951)
T ss_pred ------------------------------------------------------------------------------eE
Confidence 19
Q ss_pred EEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEe-cCccchhhhhhcceeccchHhHHHH-HHhhhhh
Q 001335 831 CCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-LLVHGRW 908 (1097)
Q Consensus 831 ~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam-~g~e~~~a~~~AD~vi~~~~~l~~l-ll~~Gr~ 908 (1097)
+|++.|+||.+.|+.+|+ .++.|+|+|||.||.|+|.+|||||+| .|++. |.++||++++..+....+ .+..+|+
T Consensus 766 ~aev~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPALA~AdVGIaig~gs~v--AieaADIVLmrn~L~~v~~ai~LSrk 842 (951)
T KOG0207|consen 766 YAEVLPEQKAEKIKEIQK-NGGPVAMVGDGINDAPALAQADVGIAIGAGSDV--AIEAADIVLMRNDLRDVPFAIDLSRK 842 (951)
T ss_pred EeccCchhhHHHHHHHHh-cCCcEEEEeCCCCccHHHHhhccceeeccccHH--HHhhCCEEEEccchhhhHHHHHHHHH
Confidence 999999999999999999 689999999999999999999999999 56555 999999999998875544 4778999
Q ss_pred hHHHHhHHHHHHHHHHHHHHHHHHH
Q 001335 909 SYLRICKVVLYFFYKNLTFTLTQFW 933 (1097)
Q Consensus 909 ~~~~i~~~i~~~~~~ni~~~~~~~~ 933 (1097)
..+|++.++.|.+.+|+..+.+...
T Consensus 843 t~~rIk~N~~~A~~yn~~~IpIAag 867 (951)
T KOG0207|consen 843 TVKRIKLNFVWALIYNLVGIPIAAG 867 (951)
T ss_pred HHhhHHHHHHHHHHHHHhhhhhhee
Confidence 9999999999999999986555443
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-58 Score=548.30 Aligned_cols=492 Identities=17% Similarity=0.217 Sum_probs=377.8
Q ss_pred HHHHhhhccccCcccCcccchhhHHHHHHHHHHHHHHHHHHHhhchh------hhcCceEEEeeCCeEEEEecccCccCc
Q 001335 90 FLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRFQNDM------TINSTPVEVLQGQRWVSIPWRKLQVGD 163 (1097)
Q Consensus 90 fl~~~il~~~~~~~~~~~~~~~~l~~vl~is~~~~~~ed~~r~k~~~------~~n~~~~~V~r~g~~~~i~~~~L~vGD 163 (1097)
++++++++++. ..|+.... +++++++.. .++.++++|+.+ ++++++++|+|+|+++++++++|+|||
T Consensus 5 ~~~a~~~~~~~---~~~~~~~~-i~~~~~~~~---~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GD 77 (536)
T TIGR01512 5 MALAALGAVAI---GEYLEGAL-LLLLFSIGE---TLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGD 77 (536)
T ss_pred HHHHHHHHHHH---hhHHHHHH-HHHHHHHHH---HHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCC
Confidence 34444444432 23455533 333444443 445555544433 335789999999999999999999999
Q ss_pred EEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEE
Q 001335 164 IVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNL 243 (1097)
Q Consensus 164 II~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~ 243 (1097)
+|.|++||.+|||+++++|+ +.||||+|||||.|+.|.+++ .+|+||.
T Consensus 78 iv~v~~G~~iP~Dg~ii~g~-----~~vdes~lTGEs~pv~k~~g~---------------------------~v~aGt~ 125 (536)
T TIGR01512 78 VVVVKPGERVPVDGVVLSGT-----STVDESALTGESVPVEKAPGD---------------------------EVFAGAI 125 (536)
T ss_pred EEEEcCCCEeecceEEEeCc-----EEEEecccCCCCCcEEeCCCC---------------------------EEEeeeE
Confidence 99999999999999999986 799999999999999998875 7899999
Q ss_pred EEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceeec---cCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001335 244 IMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMN---SMNIPSKRSTLERKLDKLILALFATLTVMCLICA 320 (1097)
Q Consensus 244 ~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~ 320 (1097)
+.+|. +.++|+.||.+|.+++. ..+...+++++++.++++..++.++.++++++.+
T Consensus 126 v~~G~---------------------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (536)
T TIGR01512 126 NLDGV---------------------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIW 184 (536)
T ss_pred ECCce---------------------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888 99999999999976543 3445667899999999999999888888887776
Q ss_pred HHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCccccc
Q 001335 321 IGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYH 400 (1097)
Q Consensus 321 i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~ 400 (1097)
+.+.+... +...+..++.+++..|||+|+++++++.... ...+
T Consensus 185 ~~~~~~~~----------------------------~~~~~~~~~svlv~~~P~aL~la~~~~~~~~-~~~~-------- 227 (536)
T TIGR01512 185 LVPGLLKR----------------------------WPFWVYRALVLLVVASPCALVISAPAAYLSA-ISAA-------- 227 (536)
T ss_pred HHHHHhcc----------------------------cHHHHHHHHHHHhhcCccccccchHHHHHHH-HHHH--------
Confidence 65433211 1126778899999999999999999988887 6655
Q ss_pred ccCCCCceeccCccccccccceEEEecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccC
Q 001335 401 AESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHE 480 (1097)
Q Consensus 401 ~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1097)
+++++++|+++.+|.||+++++|||||||||+|+|++.++...
T Consensus 228 --~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~----------------------------------- 270 (536)
T TIGR01512 228 --ARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA----------------------------------- 270 (536)
T ss_pred --HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH-----------------------------------
Confidence 7899999999999999999999999999999999999876310
Q ss_pred CCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEE
Q 001335 481 KGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIY 560 (1097)
Q Consensus 481 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~ 560 (1097)
+++...+.+. ..+.||.+.|+++++++.+ .+ +.
T Consensus 271 -------------------------~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~-~~-----~~-- 303 (536)
T TIGR01512 271 -------------------------EVLRLAAAAE--------------QASSHPLARAIVDYARKRE-NV-----ES-- 303 (536)
T ss_pred -------------------------HHHHHHHHHh--------------ccCCCcHHHHHHHHHHhcC-CC-----cc--
Confidence 1222222111 1246999999999998754 00 00
Q ss_pred EEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcC
Q 001335 561 VRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSG 640 (1097)
Q Consensus 561 i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~G 640 (1097)
.. .+| .+.+...+ .+.++. .|+++.+.+. + ...+..+|
T Consensus 304 -------------~~------~~~----g~gi~~~~--~g~~~~---ig~~~~~~~~----~----------~~~~~~~~ 341 (536)
T TIGR01512 304 -------------VE------EVP----GEGVRAVV--DGGEVR---IGNPRSLEAA----V----------GARPESAG 341 (536)
T ss_pred -------------eE------Eec----CCeEEEEE--CCeEEE---EcCHHHHhhc----C----------CcchhhCC
Confidence 00 011 12222222 222333 3887554221 1 01456678
Q ss_pred CeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCC-eEE
Q 001335 641 LRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGI-KIW 719 (1097)
Q Consensus 641 lR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGI-kv~ 719 (1097)
.+++.++ .|..++|.+.++|+++++++++|+.|+++|+ +++
T Consensus 342 ~~~~~v~--------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~ 383 (536)
T TIGR01512 342 KTIVHVA--------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVV 383 (536)
T ss_pred CeEEEEE--------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEE
Confidence 8877666 3679999999999999999999999999999 999
Q ss_pred EEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEE
Q 001335 720 VLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLA 799 (1097)
Q Consensus 720 mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1097)
|+|||+..++..+++++|+..
T Consensus 384 vvTgd~~~~a~~i~~~lgi~~----------------------------------------------------------- 404 (536)
T TIGR01512 384 MLTGDRRAVAERVARELGIDE----------------------------------------------------------- 404 (536)
T ss_pred EEcCCCHHHHHHHHHHcCChh-----------------------------------------------------------
Confidence 999999999999999999831
Q ss_pred EEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCc
Q 001335 800 LIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQ 879 (1097)
Q Consensus 800 lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~ 879 (1097)
+|++..|++|..+++.+++ .++.|+|+|||.||++|++.||+||+++..
T Consensus 405 ------------------------------~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~~ 453 (536)
T TIGR01512 405 ------------------------------VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPALAAADVGIAMGAS 453 (536)
T ss_pred ------------------------------hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHhCCEEEEeCCC
Confidence 5677789999999999998 678999999999999999999999999622
Q ss_pred cchhhhhhcceeccchHh--HHHHHHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 001335 880 EGMQAVMASDFAIAQFRF--LTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFW 933 (1097)
Q Consensus 880 e~~~a~~~AD~vi~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~ 933 (1097)
....++.+||+++.+.++ +..+ +..||..++++++++.|.+.+|++.+...++
T Consensus 454 ~~~~~~~~ad~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 454 GSDVAIETADVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred ccHHHHHhCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233378899999965444 6555 8999999999999999999999877665543
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-57 Score=545.03 Aligned_cols=484 Identities=19% Similarity=0.212 Sum_probs=376.5
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHhhchh------hhcCceEEEeeC-CeEEEEecccCccCcEEEEccCCccCceEE
Q 001335 106 PVTNVVPLSLVLLVSLIKEAWEDWKRFQNDM------TINSTPVEVLQG-QRWVSIPWRKLQVGDIVMVKQDGFFPADLL 178 (1097)
Q Consensus 106 ~~~~~~~l~~vl~is~~~~~~ed~~r~k~~~------~~n~~~~~V~r~-g~~~~i~~~~L~vGDII~l~~ge~vPaD~v 178 (1097)
++.....+++++ .+.+.+|++.++|+.+ .+.+.+++|+|+ |++++|+.++|+|||+|.|++||.||||++
T Consensus 53 ~~~~~~~i~~~~---~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~ 129 (562)
T TIGR01511 53 FFDASAMLITFI---LLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGT 129 (562)
T ss_pred hHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceE
Confidence 444444333333 3346667666655433 334678999985 677999999999999999999999999999
Q ss_pred EEeeeCCCceEEEEccccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCee
Q 001335 179 FLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQIL 258 (1097)
Q Consensus 179 lL~~s~~~g~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l 258 (1097)
+++|+ +.||||.|||||.|+.|++++ .+|+||++.+|.
T Consensus 130 v~~g~-----~~vdes~lTGEs~pv~k~~gd---------------------------~V~aGt~~~~g~---------- 167 (562)
T TIGR01511 130 VIEGE-----SEVDESLVTGESLPVPKKVGD---------------------------PVIAGTVNGTGS---------- 167 (562)
T ss_pred EEECc-----eEEehHhhcCCCCcEEcCCCC---------------------------EEEeeeEECCce----------
Confidence 99987 799999999999999999876 789999999988
Q ss_pred ecccEEecCCeEEEEEEEecCccceee---ccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Q 001335 259 LRGCSLRNTEYIIGAVIFAGHETKVMM---NSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLG 335 (1097)
Q Consensus 259 lrGs~l~nt~~~~gvVv~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~ 335 (1097)
+.+.|+.+|.+|.+.+ ...+.+.+++++++.++++..++.+++++++++.++.|.
T Consensus 168 -----------~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~----------- 225 (562)
T TIGR01511 168 -----------LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL----------- 225 (562)
T ss_pred -----------EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 9999999999997644 344566778999999999999998888888777655432
Q ss_pred ccCCCCCccCCCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccc
Q 001335 336 LHNMGNSVEDDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLN 415 (1097)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~ 415 (1097)
..+..++.+++..|||+|+++++++.... ...+ +++++++|+++.+
T Consensus 226 -----------------------~~~~~~~svlvvacPcaL~la~p~a~~~~-~~~a----------a~~gIlik~~~~l 271 (562)
T TIGR01511 226 -----------------------FALEFAVTVLIIACPCALGLATPTVIAVA-TGLA----------AKNGVLIKDGDAL 271 (562)
T ss_pred -----------------------HHHHHHHHHHHHhccchhhhHHHHHHHHH-HHHH----------HHCCeEEcChHHH
Confidence 25777899999999999999999988887 6655 7899999999999
Q ss_pred cccccceEEEecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhccc
Q 001335 416 EELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAW 495 (1097)
Q Consensus 416 e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 495 (1097)
|.||++|+||||||||||+|+|++.++...+..
T Consensus 272 E~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~----------------------------------------------- 304 (562)
T TIGR01511 272 ERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR----------------------------------------------- 304 (562)
T ss_pred HHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC-----------------------------------------------
Confidence 999999999999999999999999987532110
Q ss_pred CCCCChhHHHHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeE
Q 001335 496 RNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDV 575 (1097)
Q Consensus 496 ~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~ 575 (1097)
. ..+++..++.+. ..+.||.+.|+++++++.|..... ..
T Consensus 305 ----~---~~~~l~~aa~~e--------------~~s~HPia~Ai~~~~~~~~~~~~~--------------------~~ 343 (562)
T TIGR01511 305 ----D---RTELLALAAALE--------------AGSEHPLAKAIVSYAKEKGITLVE--------------------VS 343 (562)
T ss_pred ----C---HHHHHHHHHHHh--------------ccCCChHHHHHHHHHHhcCCCcCC--------------------CC
Confidence 0 012232222111 114699999999999887643211 00
Q ss_pred EEEEeEeecCCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHH
Q 001335 576 CYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDM 655 (1097)
Q Consensus 576 ~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~ 655 (1097)
.++ .+ ..+.+...+ .+.++ ..|+++.+.+. +.. +.++.++|.+++.++.
T Consensus 344 ~~~---~~----~g~Gi~~~~--~g~~~---~iG~~~~~~~~----~~~--------~~~~~~~g~~~~~~~~------- 392 (562)
T TIGR01511 344 DFK---AI----PGIGVEGTV--EGTKI---QLGNEKLLGEN----AIK--------IDGKAEQGSTSVLVAV------- 392 (562)
T ss_pred CeE---EE----CCceEEEEE--CCEEE---EEECHHHHHhC----CCC--------CChhhhCCCEEEEEEE-------
Confidence 011 01 122333332 23333 34998776431 111 1123578999888873
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 001335 656 YERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 735 (1097)
Q Consensus 656 ~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 735 (1097)
|.+++|.++++|+++|+++++|++|++.|++++|+|||+..++..++++
T Consensus 393 -------------------------------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 393 -------------------------------NGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred -------------------------------CCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhH
Q 001335 736 CNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSL 815 (1097)
Q Consensus 736 ~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l 815 (1097)
+|+.
T Consensus 442 lgi~---------------------------------------------------------------------------- 445 (562)
T TIGR01511 442 LGIN---------------------------------------------------------------------------- 445 (562)
T ss_pred cCCc----------------------------------------------------------------------------
Confidence 9981
Q ss_pred HHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccch
Q 001335 816 RVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQF 895 (1097)
Q Consensus 816 ~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~ 895 (1097)
++++..|++|.++++.+++ .++.|+|+|||.||++|+++||+||+|+.. ...++.+||+++.+.
T Consensus 446 --------------~~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vgia~g~g-~~~a~~~Advvl~~~ 509 (562)
T TIGR01511 446 --------------VRAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALAQADVGIAIGAG-TDVAIEAADVVLMRN 509 (562)
T ss_pred --------------EEccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHhhCCEEEEeCCc-CHHHHhhCCEEEeCC
Confidence 4556689999999999998 688999999999999999999999999532 223788999999865
Q ss_pred Hh--HHHHHHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 001335 896 RF--LTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFW 933 (1097)
Q Consensus 896 ~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~ 933 (1097)
++ +..+ +..||..++++++++.|.+.+|++.+.+.+.
T Consensus 510 ~l~~l~~~-i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~ 548 (562)
T TIGR01511 510 DLNDVATA-IDLSRKTLRRIKQNLLWAFGYNVIAIPIAAG 548 (562)
T ss_pred CHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 54 5555 8899999999999999999999887655553
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-56 Score=558.61 Aligned_cols=491 Identities=18% Similarity=0.206 Sum_probs=386.6
Q ss_pred HHHHHHHHHHHHHHHHhhchhhh------cCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceE
Q 001335 116 VLLVSLIKEAWEDWKRFQNDMTI------NSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVC 189 (1097)
Q Consensus 116 vl~is~~~~~~ed~~r~k~~~~~------n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~ 189 (1097)
++++..+.+++|.+-+.|+.+.+ .+++++|+|+|++++|+.++|+|||+|.|++||.||||+++++|+ +
T Consensus 292 i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-----~ 366 (834)
T PRK10671 292 IIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGE-----A 366 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEce-----E
Confidence 33344555778888777764433 478899999999999999999999999999999999999999986 7
Q ss_pred EEEccccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCe
Q 001335 190 YIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEY 269 (1097)
Q Consensus 190 ~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~ 269 (1097)
.||||+|||||.|+.|.+++ .+|+||++.+|.
T Consensus 367 ~vdeS~lTGEs~pv~k~~gd---------------------------~V~aGt~~~~G~--------------------- 398 (834)
T PRK10671 367 WLDEAMLTGEPIPQQKGEGD---------------------------SVHAGTVVQDGS--------------------- 398 (834)
T ss_pred EEeehhhcCCCCCEecCCCC---------------------------EEEecceeccee---------------------
Confidence 99999999999999999887 789999999988
Q ss_pred EEEEEEEecCcccee---eccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCC
Q 001335 270 IIGAVIFAGHETKVM---MNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDD 346 (1097)
Q Consensus 270 ~~gvVv~tG~~Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~ 346 (1097)
+.+.|+.+|.+|.+. ....+.+..++++|+..+++..++.+++++++++++++|.+... .
T Consensus 399 ~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~-~---------------- 461 (834)
T PRK10671 399 VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP-A---------------- 461 (834)
T ss_pred EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-c----------------
Confidence 999999999999654 33445566689999999999999999888888887776643211 0
Q ss_pred CCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEe
Q 001335 347 QFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFS 426 (1097)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~ 426 (1097)
..+...+..++.+++..|||+|+++++++.... ...+ +++++++|+.+.+|.||++|++||
T Consensus 462 --------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~-~~~~----------a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 462 --------PQIVYTLVIATTVLIIACPCALGLATPMSIISG-VGRA----------AEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred --------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHH-HHHH----------HHCCeEEecHHHHHhhcCCCEEEE
Confidence 024457788999999999999999999998887 6655 889999999999999999999999
Q ss_pred cCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHH
Q 001335 427 DKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKE 506 (1097)
Q Consensus 427 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 506 (1097)
|||||||+|+|++.++...+.. .. .+.
T Consensus 523 DKTGTLT~g~~~v~~~~~~~~~---------------------------------------------------~~--~~~ 549 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKTFNGV---------------------------------------------------DE--AQA 549 (834)
T ss_pred cCCCccccCceEEEEEEccCCC---------------------------------------------------CH--HHH
Confidence 9999999999999876532100 00 011
Q ss_pred HHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCC
Q 001335 507 FFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFN 586 (1097)
Q Consensus 507 ~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~ 586 (1097)
+..+.+++.. +.||.+.|++++++..+.. . .. +|.
T Consensus 550 l~~a~~~e~~---------------s~hp~a~Ai~~~~~~~~~~--~--------------------~~--------~~~ 584 (834)
T PRK10671 550 LRLAAALEQG---------------SSHPLARAILDKAGDMTLP--Q--------------------VN--------GFR 584 (834)
T ss_pred HHHHHHHhCC---------------CCCHHHHHHHHHHhhCCCC--C--------------------cc--------cce
Confidence 1222233211 4799999999988643210 0 01 111
Q ss_pred CCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHH
Q 001335 587 STRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQA 666 (1097)
Q Consensus 587 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a 666 (1097)
.... .++-.. .+|+. +.+|+++.+.+... ..+.+.+.+++++.+|.+++.+|+
T Consensus 585 ~~~g-~Gv~~~-~~g~~--~~~G~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~v~va~------------------ 637 (834)
T PRK10671 585 TLRG-LGVSGE-AEGHA--LLLGNQALLNEQQV-----DTKALEAEITAQASQGATPVLLAV------------------ 637 (834)
T ss_pred Eecc-eEEEEE-ECCEE--EEEeCHHHHHHcCC-----ChHHHHHHHHHHHhCCCeEEEEEE------------------
Confidence 1111 112111 13432 34599987743211 123455667788899999999995
Q ss_pred HhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEE
Q 001335 667 KSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQF 746 (1097)
Q Consensus 667 ~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i 746 (1097)
|..++|+++++|++|++++++|+.|++.|++++|+|||+..+|..+++++|+..
T Consensus 638 --------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------ 691 (834)
T PRK10671 638 --------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------ 691 (834)
T ss_pred --------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------
Confidence 557999999999999999999999999999999999999999999999999831
Q ss_pred EEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccC
Q 001335 747 IITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNC 826 (1097)
Q Consensus 747 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~ 826 (1097)
T Consensus 692 -------------------------------------------------------------------------------- 691 (834)
T PRK10671 692 -------------------------------------------------------------------------------- 691 (834)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh--HHHHHHh
Q 001335 827 SSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF--LTDLLLV 904 (1097)
Q Consensus 827 ~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~--l~~lll~ 904 (1097)
++++..|++|.++++.++. .++.|+|+|||.||++|++.||+||+|++. ...++++||+++.+.++ +..+ +.
T Consensus 692 ---~~~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgia~g~g-~~~a~~~ad~vl~~~~~~~i~~~-i~ 765 (834)
T PRK10671 692 ---VIAGVLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPALAQADVGIAMGGG-SDVAIETAAITLMRHSLMGVADA-LA 765 (834)
T ss_pred ---EEeCCCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeEEecCC-CHHHHHhCCEEEecCCHHHHHHH-HH
Confidence 6778889999999999998 688999999999999999999999999432 23389999999998777 4444 88
Q ss_pred hhhhhHHHHhHHHHHHHHHHHHHHHHHH
Q 001335 905 HGRWSYLRICKVVLYFFYKNLTFTLTQF 932 (1097)
Q Consensus 905 ~Gr~~~~~i~~~i~~~~~~ni~~~~~~~ 932 (1097)
.||..++++++++.|.+.+|++.+...+
T Consensus 766 l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 766 ISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987755443
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-47 Score=409.86 Aligned_cols=498 Identities=18% Similarity=0.217 Sum_probs=355.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhc----CceEEEeeC-CeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCc
Q 001335 113 LSLVLLVSLIKEAWEDWKRFQNDMTIN----STPVEVLQG-QRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADG 187 (1097)
Q Consensus 113 l~~vl~is~~~~~~ed~~r~k~~~~~n----~~~~~V~r~-g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g 187 (1097)
|+|.+++.-+-|++.+-|-+.+-..+. ...++++++ |+++.+++.+|+.||+|.|+.||.+|+|+-+++|.
T Consensus 72 L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~---- 147 (681)
T COG2216 72 LWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGV---- 147 (681)
T ss_pred HHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeee----
Confidence 344444555556666655444322222 234555665 89999999999999999999999999999999987
Q ss_pred eEEEEccccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecC
Q 001335 188 VCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNT 267 (1097)
Q Consensus 188 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt 267 (1097)
++||||++||||.|+.|.++-..+ -+-- |+.+. +
T Consensus 148 -asVdESAITGESaPViresGgD~s------------------------sVtG--------------------gT~v~-S 181 (681)
T COG2216 148 -ASVDESAITGESAPVIRESGGDFS------------------------SVTG--------------------GTRVL-S 181 (681)
T ss_pred -eecchhhccCCCcceeeccCCCcc------------------------cccC--------------------CcEEe-e
Confidence 799999999999999999874221 0111 33333 3
Q ss_pred CeEEEEEEEecCcc---ceeeccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCcc
Q 001335 268 EYIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVE 344 (1097)
Q Consensus 268 ~~~~gvVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~ 344 (1097)
+|+...++..-.+| |+....+.+..+++|-|-.++.+..-+.++. +++.++..-+..|. ..
T Consensus 182 D~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliF-L~~~~Tl~p~a~y~-------~g-------- 245 (681)
T COG2216 182 DWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIF-LLAVATLYPFAIYS-------GG-------- 245 (681)
T ss_pred eeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHH-HHHHHhhhhHHHHc-------CC--------
Confidence 78888888888888 4444556777788898887776654443221 12222211111111 00
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEE
Q 001335 345 DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYI 424 (1097)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i 424 (1097)
....+...+.|++.+||-.+.-.++..-..+ .-+ + .+.++++++..++|..|.||++
T Consensus 246 ------------~~~~i~~LiALlV~LIPTTIGgLLsAIGIAG-MdR------v----~~~NViA~SGRAVEaaGDvdtl 302 (681)
T COG2216 246 ------------GAASVTVLVALLVCLIPTTIGGLLSAIGIAG-MDR------V----TQFNVIATSGRAVEAAGDVDTL 302 (681)
T ss_pred ------------CCcCHHHHHHHHHHHhcccHHHHHHHhhhhh-hhH------h----hhhceeecCcchhhhcCCccEE
Confidence 0123556678888999987666555443333 333 3 7789999999999999999999
Q ss_pred EecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHH
Q 001335 425 FSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDAC 504 (1097)
Q Consensus 425 ~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 504 (1097)
..|||||+|-|.=.-..+...+ ....
T Consensus 303 iLDKTGTIT~GnR~A~~f~p~~------------------------------------------------------gv~~ 328 (681)
T COG2216 303 LLDKTGTITLGNRQASEFIPVP------------------------------------------------------GVSE 328 (681)
T ss_pred EecccCceeecchhhhheecCC------------------------------------------------------CCCH
Confidence 9999999996543222221100 0012
Q ss_pred HHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeec
Q 001335 505 KEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLE 584 (1097)
Q Consensus 505 ~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~ 584 (1097)
+++..+..+++-. .+.|.-..+++.|++.|+....+.. . ......|
T Consensus 329 ~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~~~~~~------------------~--~~~~fvp 374 (681)
T COG2216 329 EELADAAQLASLA--------------DETPEGRSIVELAKKLGIELREDDL------------------Q--SHAEFVP 374 (681)
T ss_pred HHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCCCcccc------------------c--ccceeee
Confidence 3344444443221 2478888999999999855432110 0 0124579
Q ss_pred CCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHH
Q 001335 585 FNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFI 664 (1097)
Q Consensus 585 F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~ 664 (1097)
|+.+.+..++-. +++ .-.-|||...+.......+...++.++...++-++.|-..|+++.
T Consensus 375 FtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~---------------- 434 (681)
T COG2216 375 FTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVE---------------- 434 (681)
T ss_pred cceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEE----------------
Confidence 987766555543 333 446799999999998877666888999999999999999999994
Q ss_pred HHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCe
Q 001335 665 QAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK 744 (1097)
Q Consensus 665 ~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~ 744 (1097)
|-.++|.+.++|-+++|.+|-+.+||+.|||.+|+||||+.||..||.+.|+.+
T Consensus 435 ----------------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd---- 488 (681)
T COG2216 435 ----------------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---- 488 (681)
T ss_pred ----------------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh----
Confidence 779999999999999999999999999999999999999999999999999832
Q ss_pred EEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhc
Q 001335 745 QFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSL 824 (1097)
Q Consensus 745 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~ 824 (1097)
T Consensus 489 -------------------------------------------------------------------------------- 488 (681)
T COG2216 489 -------------------------------------------------------------------------------- 488 (681)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEe-cCccchhhhhhcceeccchHhHHHH-H
Q 001335 825 NCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGI-SGQEGMQAVMASDFAIAQFRFLTDL-L 902 (1097)
Q Consensus 825 ~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam-~g~e~~~a~~~AD~vi~~~~~l~~l-l 902 (1097)
..++++|++|..+++.-|. .|+.|+|+|||.||.|+|.+||||+|| +|+.. ||++++.+=.|.+.-+-+ +
T Consensus 489 -----fiAeatPEdK~~~I~~eQ~-~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqA--AkEAaNMVDLDS~PTKliev 560 (681)
T COG2216 489 -----FIAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSNPTKLIEV 560 (681)
T ss_pred -----hhhcCChHHHHHHHHHHHh-cCcEEEEcCCCCCcchhhhhcchhhhhccccHH--HHHhhcccccCCCccceehH
Confidence 5578999999999999998 799999999999999999999999999 66665 999999997776652222 2
Q ss_pred HhhhhhhHHHHhHHHHHHH
Q 001335 903 LVHGRWSYLRICKVVLYFF 921 (1097)
Q Consensus 903 l~~Gr~~~~~i~~~i~~~~ 921 (1097)
+.-|+.....=..+-.|++
T Consensus 561 V~IGKqlLiTRGaLTTFSI 579 (681)
T COG2216 561 VEIGKQLLITRGALTTFSI 579 (681)
T ss_pred hhhhhhheeecccceeeeh
Confidence 4457665544333334443
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=276.57 Aligned_cols=222 Identities=26% Similarity=0.422 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhc---Cce-EEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCce
Q 001335 113 LSLVLLVSLIKEAWEDWKRFQNDMTIN---STP-VEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 188 (1097)
Q Consensus 113 l~~vl~is~~~~~~ed~~r~k~~~~~n---~~~-~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~ 188 (1097)
++++++++.+.+.++++|+++..++++ +.+ ++|.|||++++++|+||+|||||.|++||.+|||+++|+ +|.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g~ 77 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SGS 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SSE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee----ccc
Confidence 457777888889999999999988765 344 999999999999999999999999999999999999999 133
Q ss_pred EEEEccccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCC
Q 001335 189 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 268 (1097)
Q Consensus 189 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 268 (1097)
|+||||+||||+.|+.|.+. +++.+|++++||.+. +|
T Consensus 78 ~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~-~g 114 (230)
T PF00122_consen 78 AYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV-SG 114 (230)
T ss_dssp EEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-EE
T ss_pred cccccccccccccccccccc------------------------------------------cccccchhhcccccc-cc
Confidence 99999999999999999863 467789999999999 78
Q ss_pred eEEEEEEEecCccceeecc---CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccC
Q 001335 269 YIIGAVIFAGHETKVMMNS---MNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVED 345 (1097)
Q Consensus 269 ~~~gvVv~tG~~Tk~~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~ 345 (1097)
+++++|++||.+|++++.. ..++.+++++++.++++..+++++.+++++++++++.++....
T Consensus 115 ~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 179 (230)
T PF00122_consen 115 WGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFNDSGI--------------- 179 (230)
T ss_dssp EEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGSTTC---------------
T ss_pred ccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceeccccc---------------
Confidence 9999999999999765443 3566678999999999999998888888887765544421111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccc
Q 001335 346 DQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEE 417 (1097)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~ 417 (1097)
.+...+..++.+++.++|++|+++++++...+ +.++ .++++++|+++.+|+
T Consensus 180 ----------~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~-~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 180 ----------SFFKSFLFAISLLIVLIPCALPLALPLSLAIA-ARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp ----------HCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHH-HHHH----------HHTTEEESSTTHHHH
T ss_pred ----------ccccccccccceeeeecccceeehHHHHHHHH-HHHH----------HHCCEEEeCcccccC
Confidence 23457888899999999999999999999998 8777 778999999999884
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-20 Score=200.53 Aligned_cols=97 Identities=32% Similarity=0.496 Sum_probs=90.1
Q ss_pred CceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHH
Q 001335 687 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE 766 (1097)
Q Consensus 687 ~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 766 (1097)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+++++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 789999999999999999999999999999999999999999999999999932
Q ss_pred HHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEe--CcccH--HHH
Q 001335 767 IARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRV--SPLQK--AQV 842 (1097)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~--sP~qK--~~i 842 (1097)
..+++++ +|++| ..+
T Consensus 169 -------------------------------------------------------------~~v~a~~~~kP~~k~~~~~ 187 (215)
T PF00702_consen 169 -------------------------------------------------------------SIVFARVIGKPEPKIFLRI 187 (215)
T ss_dssp -------------------------------------------------------------EEEEESHETTTHHHHHHHH
T ss_pred -------------------------------------------------------------ccccccccccccchhHHHH
Confidence 1289999 99999 999
Q ss_pred HHHHHcccCceEEEecCCCCChhhhhhcC
Q 001335 843 TSLVKKGARKITLSIGDGANDVSMIQAAH 871 (1097)
Q Consensus 843 v~~lk~~~~~~vlaiGDG~ND~~ml~~Ad 871 (1097)
++.++. .++.|+|+|||.||++|+++||
T Consensus 188 i~~l~~-~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 188 IKELQV-KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHTC-TGGGEEEEESSGGHHHHHHHSS
T ss_pred HHHHhc-CCCEEEEEccCHHHHHHHHhCc
Confidence 999995 4569999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.8e-14 Score=126.90 Aligned_cols=90 Identities=36% Similarity=0.521 Sum_probs=70.6
Q ss_pred hcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCce
Q 001335 512 AICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKR 591 (1097)
Q Consensus 512 alc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkr 591 (1097)
++||++....+++....+ ..|+|+|.||+.++.+.|...... .....+++++.+||||+|||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~~-----------------~~~~~~~~~~~~pF~S~rK~ 62 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDIK-----------------EIRSKYKIVAEIPFDSERKR 62 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcHH-----------------HHHhhcceeEEEccCcccce
Confidence 589999876554433322 468999999999999997543210 02567999999999999999
Q ss_pred EEEEEEecCCcEEEEEecchhHHHHHhhc
Q 001335 592 QSVVCRYADGRLVLYCKGADSVIYERLAN 620 (1097)
Q Consensus 592 msviv~~~~~~~~l~~KGa~~~i~~~~~~ 620 (1097)
|+|+++ .++.+++|+|||||.|+++|+.
T Consensus 63 msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 63 MSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred eEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 999999 4446788999999999999974
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.9e-13 Score=121.41 Aligned_cols=125 Identities=23% Similarity=0.372 Sum_probs=107.3
Q ss_pred ceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHH
Q 001335 688 LTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEI 767 (1097)
Q Consensus 688 l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~ 767 (1097)
....+.++---+|-++|+++|++|++. +++.++|||..-+....|.-.|+-..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 466788888889999999999999999 99999999999999999999996321
Q ss_pred HHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHH
Q 001335 768 ARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVK 847 (1097)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk 847 (1097)
-+++...|+.|+.+++.|+
T Consensus 72 -------------------------------------------------------------rv~a~a~~e~K~~ii~eLk 90 (152)
T COG4087 72 -------------------------------------------------------------RVFAGADPEMKAKIIRELK 90 (152)
T ss_pred -------------------------------------------------------------eeecccCHHHHHHHHHHhc
Confidence 1788888999999999999
Q ss_pred cccCceEEEecCCCCChhhhhhcCeeEEecCccch--hhhhhcceeccchHhHHHH
Q 001335 848 KGARKITLSIGDGANDVSMIQAAHIGVGISGQEGM--QAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 848 ~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~--~a~~~AD~vi~~~~~l~~l 901 (1097)
+ .++.|.|+|||+||..||+.||+||..-+.|+. .+..+||+++-+.+-+..+
T Consensus 91 k-~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl 145 (152)
T COG4087 91 K-RYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDL 145 (152)
T ss_pred C-CCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHH
Confidence 8 789999999999999999999999977454542 2558999999887665554
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.8e-08 Score=114.30 Aligned_cols=291 Identities=13% Similarity=0.153 Sum_probs=172.0
Q ss_pred HhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccc-hhcccCC
Q 001335 684 IEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAI-RDVEERG 762 (1097)
Q Consensus 684 iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~-~~~~~~~ 762 (1097)
.-.+-.|.|++...-+.+.+....|+.|-++.|+.+..+-.+....+-.|.++||-...+-.+.+..++..- .+.. ..
T Consensus 811 a~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~-pa 889 (1354)
T KOG4383|consen 811 AFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAG-PA 889 (1354)
T ss_pred HhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCC-CC
Confidence 346788999999999999999999999999999999999999999999999999987666555554443210 0000 00
Q ss_pred ChH-HHHHHhHHHHHHHHHHHHHhhhhc-ccccCCCeEEE-EEcCccchhhcCh-----------hHHHHHHhhhccCC-
Q 001335 763 DPV-EIARFMREEVKRELNKCIDEAQQY-IHSISGEKLAL-IIDGKCLMYALDP-----------SLRVILLNLSLNCS- 827 (1097)
Q Consensus 763 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l-vi~G~~l~~~l~~-----------~l~~~f~~l~~~~~- 827 (1097)
..+ ..++....+...++.....+.... .+.....-..+ ..|.. .....++ +.+.++.++- ..+
T Consensus 890 ~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd-i~kf~ed~N~AkLPrGihnVRPHL~~iD-NVPL 967 (1354)
T KOG4383|consen 890 HEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD-IAKFAEDPNIAKLPRGIHNVRPHLDEID-NVPL 967 (1354)
T ss_pred ChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc-hhhhcCCCchhhcCcchhhcCccccccc-Ccce
Confidence 011 011111112222211100000000 00000000000 00000 0001110 1111221111 000
Q ss_pred -ceEEEEeCcccHHHHHHHHHcccCceEEEecCCCC--ChhhhhhcCeeEEecCccchh-------------hhh-----
Q 001335 828 -SVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGAN--DVSMIQAAHIGVGISGQEGMQ-------------AVM----- 886 (1097)
Q Consensus 828 -~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~N--D~~ml~~AdvGIam~g~e~~~-------------a~~----- 886 (1097)
.-.|.+++|+.-.+.++..|+ .|++|+..|..+| ....+-+|||+|++..-+... ...
T Consensus 968 LV~LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandgl 1046 (1354)
T KOG4383|consen 968 LVGLFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGL 1046 (1354)
T ss_pred eeeeccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCC
Confidence 127889999999999999999 7999999999988 445667899999885432210 011
Q ss_pred ------------hcceeccchHhHHHH-HHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHH
Q 001335 887 ------------ASDFAIAQFRFLTDL-LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSL 953 (1097)
Q Consensus 887 ------------~AD~vi~~~~~l~~l-ll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 953 (1097)
+.|+.+.+-..++.. |++-.|....-+++.++|.++..+.+..++|+..++. ..++|+--+++|
T Consensus 1047 splQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~---LP~i~s~sdii~ 1123 (1354)
T KOG4383|consen 1047 SPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFF---LPIIFSHSDIIL 1123 (1354)
T ss_pred CceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---ccchhccchHHH
Confidence 222322222233333 5788999999999999999999999999988877664 345566667777
Q ss_pred HHHHHhhHHHHHHh-hccccCChh-hhhcCch
Q 001335 954 YNVIFTSMPVIMLG-LFEKDVSAS-LSKKYPQ 983 (1097)
Q Consensus 954 ~n~~~~~lp~~~l~-~~~~d~~~~-~~~~~P~ 983 (1097)
...+- .|.+++| ++.+..... .+|..|.
T Consensus 1124 lScfc--~PlL~i~tL~gk~~hkSii~maagK 1153 (1354)
T KOG4383|consen 1124 LSCFC--IPLLFIGTLFGKFEHKSIIIMAAGK 1153 (1354)
T ss_pred HHHHH--HHHHHHHHHhcCCCccceEEeeccC
Confidence 76554 6778777 555544333 3344443
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.8e-10 Score=126.16 Aligned_cols=200 Identities=15% Similarity=0.164 Sum_probs=111.0
Q ss_pred CceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHH
Q 001335 687 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE 766 (1097)
Q Consensus 687 ~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 766 (1097)
|.||+.- ..++.+.+.++|++|+++|++++++|||....+..+.+++++.... .+.|+.++..+.+.... ...
T Consensus 11 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~--~~~I~~NGa~i~~~~~~--~~i 83 (270)
T PRK10513 11 DGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPG--DYCITNNGALVQKAADG--ETV 83 (270)
T ss_pred CCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCC--CeEEEcCCeEEEECCCC--CEE
Confidence 4455532 2357889999999999999999999999999999999999975322 24566666655432111 001
Q ss_pred HHHHhHHHHHHHHHHHHHhhhhccccc------------------------------------CCCe--EEEEEcCccch
Q 001335 767 IARFMREEVKRELNKCIDEAQQYIHSI------------------------------------SGEK--LALIIDGKCLM 808 (1097)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~--~~lvi~G~~l~ 808 (1097)
..+.+..+....+.....+........ .... ..+++......
T Consensus 84 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 163 (270)
T PRK10513 84 AQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEIL 163 (270)
T ss_pred EecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHH
Confidence 111111111111111111110000000 0000 00111100000
Q ss_pred hhcChhHHHHHH-hhhccCCceEEEEeCccc--HHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccch
Q 001335 809 YALDPSLRVILL-NLSLNCSSVVCCRVSPLQ--KAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGM 882 (1097)
Q Consensus 809 ~~l~~~l~~~f~-~l~~~~~~vi~~r~sP~q--K~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~ 882 (1097)
..+..++.+.+. .+.......-+.+++|.. |+..++.+.++.| +.|++||||.||++||+.|++||||+++...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~ 243 (270)
T PRK10513 164 DAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPS 243 (270)
T ss_pred HHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHH
Confidence 000001111110 011111112355777775 9999998877533 5699999999999999999999999665443
Q ss_pred hhhhhcceeccc
Q 001335 883 QAVMASDFAIAQ 894 (1097)
Q Consensus 883 ~a~~~AD~vi~~ 894 (1097)
+|.+||++..+
T Consensus 244 -vK~~A~~vt~~ 254 (270)
T PRK10513 244 -VKEVAQFVTKS 254 (270)
T ss_pred -HHHhcCeeccC
Confidence 89999998864
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=3e-10 Score=125.45 Aligned_cols=184 Identities=18% Similarity=0.257 Sum_probs=108.9
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHH
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKREL 779 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1097)
+.+.+.++|+++++.|++++++|||+...+..+.+++++.. .+++.++..+.... +......+..+....+
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~-----~~I~~NGa~i~~~~----~~i~~~~l~~~~~~~i 91 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG-----PLITFNGALIYNGG----ELLFQKPLSREDVEEL 91 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc-----cEEEeCCeEEecCC----cEEeeecCCHHHHHHH
Confidence 78999999999999999999999999999999999999954 56777776665441 1122223333333333
Q ss_pred HHHHHhhhhc-ccccCCCeEE---------------------------------EEEc--CccchhhcChhHHHHHHhh-
Q 001335 780 NKCIDEAQQY-IHSISGEKLA---------------------------------LIID--GKCLMYALDPSLRVILLNL- 822 (1097)
Q Consensus 780 ~~~~~~~~~~-~~~~~~~~~~---------------------------------lvi~--G~~l~~~l~~~l~~~f~~l- 822 (1097)
.....+.... .......... +.++ .+.+.. ....+.+.+...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~ 170 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEE-LVEALRKRFPDLG 170 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHH-HHHHHhhhccccc
Confidence 3332222100 0000000000 0000 000000 000111222111
Q ss_pred -hccCCceEEEEeCccc--HHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 823 -SLNCSSVVCCRVSPLQ--KAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 823 -~~~~~~vi~~r~sP~q--K~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
........+..+.|.. |+..++.+.+..| ..|+++||+.||++||+.|+.||||+++ ...++..||++...
T Consensus 171 ~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A~~vt~~ 247 (264)
T COG0561 171 LTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVTTS 247 (264)
T ss_pred eEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhCCcccCC
Confidence 1111112225666665 9999988877544 3599999999999999999999999766 34489999976543
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.2e-10 Score=124.81 Aligned_cols=183 Identities=16% Similarity=0.158 Sum_probs=104.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
.+.+.+.++|++|+++|++++++|||....+..+.+++++.. ..++.++..+.+... .....+.+..+...+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~-----~~I~~NGa~I~~~~~---~~l~~~~i~~~~~~~ 90 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA-----YLITGNGTRVHSLEG---ELLHRQDLPADVAEL 90 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC-----cEEecCCcEEEcCCC---CEEEeecCCHHHHHH
Confidence 588899999999999999999999999999999999999732 355666665543111 001111122222222
Q ss_pred HHHHHHhhhhcccc---------------------------------cC-CCeEEEEEcCcc-chhhcChhHHHHHHh-h
Q 001335 779 LNKCIDEAQQYIHS---------------------------------IS-GEKLALIIDGKC-LMYALDPSLRVILLN-L 822 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~---------------------------------~~-~~~~~lvi~G~~-l~~~l~~~l~~~f~~-l 822 (1097)
+.+...+.+..... .. ....-+.+-+.. -...+...+.+.+.. +
T Consensus 91 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~ 170 (272)
T PRK15126 91 VLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERA 170 (272)
T ss_pred HHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCE
Confidence 11111110000000 00 000000111110 000001112222211 1
Q ss_pred hccCCceEEEEeCccc--HHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcce
Q 001335 823 SLNCSSVVCCRVSPLQ--KAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDF 890 (1097)
Q Consensus 823 ~~~~~~vi~~r~sP~q--K~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~ 890 (1097)
.......-+.+++|.. |+.-++.+.++.| ..|++||||.||++||+.|+.||||+++... +|.+||+
T Consensus 171 ~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~-vK~~A~~ 242 (272)
T PRK15126 171 HLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQ-LRAELPH 242 (272)
T ss_pred EEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHH-HHHhCCC
Confidence 1111112356788876 9999999987544 5799999999999999999999999665443 8999997
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.1e-09 Score=121.19 Aligned_cols=186 Identities=17% Similarity=0.217 Sum_probs=107.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+.+.++|++++++|++++++|||....+..+.+++++.. ..|+.++..+.+.. + .......+..+...+
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~-----~~I~~NGa~i~~~~--~-~~i~~~~l~~~~~~~ 90 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS-----YMITSNGARVHDTD--G-NLIFSHNLDRDIASD 90 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC-----eEEEcCCcEEECCC--C-CEehhhcCCHHHHHH
Confidence 478889999999999999999999999999999999998732 35666666554321 1 112223333333333
Q ss_pred HHHHHHhh-hhcccccCCC--------------------e--------------E-EEEEcCcc-chhhcChhHHHHHH-
Q 001335 779 LNKCIDEA-QQYIHSISGE--------------------K--------------L-ALIIDGKC-LMYALDPSLRVILL- 820 (1097)
Q Consensus 779 ~~~~~~~~-~~~~~~~~~~--------------------~--------------~-~lvi~G~~-l~~~l~~~l~~~f~- 820 (1097)
+.....+. .......... . . .++..+.. ....+.+++.+.+.
T Consensus 91 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~ 170 (266)
T PRK10976 91 LFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGD 170 (266)
T ss_pred HHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCC
Confidence 32222110 0000000000 0 0 00000000 00000011111111
Q ss_pred hhhccCCceEEEEeCccc--HHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcc--eecc
Q 001335 821 NLSLNCSSVVCCRVSPLQ--KAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASD--FAIA 893 (1097)
Q Consensus 821 ~l~~~~~~vi~~r~sP~q--K~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD--~vi~ 893 (1097)
.+.......-+.++.|.. |+..++.+.++.| +.|++||||.||++||+.|+.||||+++... +|..|| ++..
T Consensus 171 ~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~~A~~~~v~~ 249 (266)
T PRK10976 171 RVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQR-LKDLLPELEVIG 249 (266)
T ss_pred cEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHH-HHHhCCCCeecc
Confidence 011111112356777775 9999998877543 5699999999999999999999999665543 889987 5654
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.8e-09 Score=128.90 Aligned_cols=201 Identities=17% Similarity=0.173 Sum_probs=109.2
Q ss_pred CceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeE----EEEecCCccchhcccCC
Q 001335 687 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQ----FIITSETNAIRDVEERG 762 (1097)
Q Consensus 687 ~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~----i~i~~~~~~~~~~~~~~ 762 (1097)
|.||+.- .-++-+.+.++|++++++|++++++|||....+..+.+++++......+ ..|+.|+..+.+...
T Consensus 316 DGTLLn~---d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NGA~I~d~~g-- 390 (580)
T PLN02887 316 DGTLLNS---KSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQGLLVYGRQG-- 390 (580)
T ss_pred CCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecCeEEEECCC--
Confidence 5566632 2348889999999999999999999999999999999999874322111 134445554432111
Q ss_pred ChHHHHHHhHHHHHHHHHHHHHhhhhcccccC-------------------------------------CC-eEEEEEcC
Q 001335 763 DPVEIARFMREEVKRELNKCIDEAQQYIHSIS-------------------------------------GE-KLALIIDG 804 (1097)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~-~~~lvi~G 804 (1097)
.....+.+..+...++.....+.+....... .. ...+++..
T Consensus 391 -~~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~ 469 (580)
T PLN02887 391 -REIYRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDT 469 (580)
T ss_pred -cEEEEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCeeEEEEEcC
Confidence 0011111112222221111111000000000 00 00011110
Q ss_pred cc-chhhcChhHHHHHH-hhhccCCceEEEEeCccc--HHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEec
Q 001335 805 KC-LMYALDPSLRVILL-NLSLNCSSVVCCRVSPLQ--KAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGIS 877 (1097)
Q Consensus 805 ~~-l~~~l~~~l~~~f~-~l~~~~~~vi~~r~sP~q--K~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~ 877 (1097)
.. ....+.+.+.+.+. .+.......-+.++.|.. |+..++.+.++.| ..|++||||.||++||+.|+.||||+
T Consensus 470 ~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg 549 (580)
T PLN02887 470 AEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS 549 (580)
T ss_pred hHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC
Confidence 00 00000011111111 011111111355777775 9999998887544 56999999999999999999999996
Q ss_pred Cccchhhhhhcceeccc
Q 001335 878 GQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 878 g~e~~~a~~~AD~vi~~ 894 (1097)
++... +|..||++..+
T Consensus 550 NA~ee-VK~~Ad~VT~s 565 (580)
T PLN02887 550 NGAEK-TKAVADVIGVS 565 (580)
T ss_pred CCCHH-HHHhCCEEeCC
Confidence 65443 89999998754
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.8e-09 Score=118.22 Aligned_cols=190 Identities=16% Similarity=0.198 Sum_probs=110.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
.++.+.+.++|++|+++|++++++|||.+..+..+..++++. ...|..++..+.. ...+......+..+...
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~-----~~~I~~nGa~i~~---~~~~~l~~~~i~~~~~~ 85 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID-----DYFICSNGALIDD---PKGKILYEKPIDSDDVK 85 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC-----SEEEEGGGTEEEE---TTTEEEEEESB-HHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch-----hhhcccccceeee---cccccchhhheeccchh
Confidence 346789999999999999999999999999999999999985 2455555554411 01111111122223333
Q ss_pred HHHHHHHhhhhccccc------------------------------------CCCeEEEEEcCc-cchhhcChhHHHHHH
Q 001335 778 ELNKCIDEAQQYIHSI------------------------------------SGEKLALIIDGK-CLMYALDPSLRVILL 820 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~------------------------------------~~~~~~lvi~G~-~l~~~l~~~l~~~f~ 820 (1097)
.+.............. ...-..+.+... .-...+.+++.+.+.
T Consensus 86 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~ 165 (254)
T PF08282_consen 86 KILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFP 165 (254)
T ss_dssp HHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHT
T ss_pred heeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccC
Confidence 3222222211100000 000000111111 111111223344443
Q ss_pred hh-hccCCceEEEEeCccc--HHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 821 NL-SLNCSSVVCCRVSPLQ--KAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 821 ~l-~~~~~~vi~~r~sP~q--K~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
.. .......-+..++|.+ |+..++.+.+.. .+.++++||+.||++||+.|+.||+|.++... ++..||++...
T Consensus 166 ~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~ 244 (254)
T PF08282_consen 166 NLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPS 244 (254)
T ss_dssp TTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESS
T ss_pred cceeEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecC
Confidence 32 1111222345667765 999999888653 36799999999999999999999999666544 89999998775
Q ss_pred hH
Q 001335 895 FR 896 (1097)
Q Consensus 895 ~~ 896 (1097)
-+
T Consensus 245 ~~ 246 (254)
T PF08282_consen 245 NN 246 (254)
T ss_dssp GT
T ss_pred CC
Confidence 33
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.3e-09 Score=111.51 Aligned_cols=184 Identities=15% Similarity=0.120 Sum_probs=100.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
.+.+.+.++|++++++||+++++|||+...+..+.+.+++.. ..+..++..+...... .......+.......
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~-----~~i~~nGa~i~~~~~~--~~~~~~~~~~~~~~~ 87 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD-----PVIAENGGEISYNEGM--DDIFLAYLEEEWFLD 87 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC-----eEEEecCcEEEeCCCC--ceEEecccCHHHHHH
Confidence 477888999999999999999999999999999999998522 2444555433321100 000000000000000
Q ss_pred -HHHH---HHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcc--cHHHHHHHHHcccC-
Q 001335 779 -LNKC---IDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPL--QKAQVTSLVKKGAR- 851 (1097)
Q Consensus 779 -~~~~---~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~--qK~~iv~~lk~~~~- 851 (1097)
.... ......... .......+..... .... ..+.+.+......+....+....|. .|...++.+.+..+
T Consensus 88 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i 163 (225)
T TIGR01482 88 IVIAKTFPFSRLKVQYP-RRASLVKMRYGID-VDTV--REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGI 163 (225)
T ss_pred HHHhcccchhhhccccc-cccceEEEeecCC-HHHH--HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCC
Confidence 0000 000000000 0001111111111 1100 0111111110011112235566665 59888888766433
Q ss_pred --ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 852 --KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 852 --~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
..+++|||+.||++|++.|++||+|.++... +|..||++..+
T Consensus 164 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~-~k~~A~~vt~~ 207 (225)
T TIGR01482 164 KPGETLVCGDSENDIDLFEVPGFGVAVANAQPE-LKEWADYVTES 207 (225)
T ss_pred CHHHEEEECCCHhhHHHHHhcCceEEcCChhHH-HHHhcCeecCC
Confidence 5699999999999999999999999665443 89999998754
|
catalyze the same reaction as SPP. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.7e-09 Score=112.74 Aligned_cols=182 Identities=19% Similarity=0.171 Sum_probs=101.8
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCC--ChHHHHHHhHHHHHH
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERG--DPVEIARFMREEVKR 777 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 777 (1097)
+.+.+.++|++|+++|++++++|||....+..+++.+++.. ..+..++..+....... ....+. . ......
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~-----~~i~~nGa~i~~~~~~~~~~~~~~~-~-~~~~~~ 93 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG-----PVIAENGGVISVGFDGKRIFLGDIE-E-CEKAYS 93 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC-----cEEEecCeEEEEcCCCCEEEEcchH-H-HHHHHH
Confidence 77899999999999999999999999999999999998732 23445554433210000 000000 0 001111
Q ss_pred HHHHHHHhhhhcccccCC--CeEEEEE-cCccchhhcChhHHHHHHhhh---ccCCceEEEEeCccc--HHHHHHHHHcc
Q 001335 778 ELNKCIDEAQQYIHSISG--EKLALII-DGKCLMYALDPSLRVILLNLS---LNCSSVVCCRVSPLQ--KAQVTSLVKKG 849 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~--~~~~lvi-~G~~l~~~l~~~l~~~f~~l~---~~~~~vi~~r~sP~q--K~~iv~~lk~~ 849 (1097)
.+................ ....+.+ ..... ++..+.+.... ....+..+.+..|.. |+..++.+.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~ 168 (230)
T PRK01158 94 ELKKRFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAEL 168 (230)
T ss_pred HHHHhccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHH
Confidence 111100000000000000 0000111 11111 11222222111 111112345777766 99988888764
Q ss_pred c---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 850 A---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 850 ~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
. ...++++||+.||++|++.|++||+|.++.. .+|..||++..+
T Consensus 169 ~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~vk~~a~~v~~~ 215 (230)
T PRK01158 169 MGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADE-ELKEAADYVTEK 215 (230)
T ss_pred hCCCHHHEEEECCchhhHHHHHhcCceEEecCccH-HHHHhcceEecC
Confidence 3 3569999999999999999999999966554 388999998764
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.3e-09 Score=110.59 Aligned_cols=180 Identities=17% Similarity=0.194 Sum_probs=101.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChH-HHHHHhHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPV-EIARFMREEVKR 777 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 777 (1097)
++.+++.++|++|+++|++++++|||....+..+++.+++.. ..+..++..+.+........ ............
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~-----~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~ 92 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG-----PVVAENGGVIFYNKEDIFLANMEEEWFLDEEKK 92 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC-----cEEEccCcEEEeCCCcEEEecccchhhHHHhhh
Confidence 488899999999999999999999999999999999988742 24445554443311100000 000000000000
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHh--hhccCCceEEEEeCcc--cHHHHHHHHHcccC--
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLN--LSLNCSSVVCCRVSPL--QKAQVTSLVKKGAR-- 851 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~--l~~~~~~vi~~r~sP~--qK~~iv~~lk~~~~-- 851 (1097)
. ......... ........+..++.... .+...+.. +.... +..+..++|. .|+..++.+.+..+
T Consensus 93 ~-~~~~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~-~~~~~ei~~~~~~K~~~i~~l~~~~~i~ 162 (215)
T TIGR01487 93 K-RFPRDRLSN---EYPRASLVIMREGKDVD-----EVREIIKERGLNLVD-SGFAIHIMKKGVDKGVGVEKLKELLGIK 162 (215)
T ss_pred h-hhhhhhccc---ccceeEEEEecCCccHH-----HHHHHHHhCCeEEEe-cCceEEEecCCCChHHHHHHHHHHhCCC
Confidence 0 000000000 00011111222222211 11212211 11111 1134455655 59999998876433
Q ss_pred -ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 852 -KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 852 -~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
..+++|||+.||++|++.|++||+|.+... +++..||++...
T Consensus 163 ~~~~i~iGDs~ND~~ml~~ag~~vam~na~~-~~k~~A~~v~~~ 205 (215)
T TIGR01487 163 PEEVAAIGDSENDIDLFRVVGFKVAVANADD-QLKEIADYVTSN 205 (215)
T ss_pred HHHEEEECCCHHHHHHHHhCCCeEEcCCccH-HHHHhCCEEcCC
Confidence 459999999999999999999999965543 389999998753
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.3e-08 Score=112.54 Aligned_cols=186 Identities=15% Similarity=0.170 Sum_probs=100.1
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhccc------------CCChHHH
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEE------------RGDPVEI 767 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~------------~~~~~~~ 767 (1097)
+-+.+.++|++|+++||+++++|||....+..+++++|+.. ...|+.|+..+..... ..+.+..
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~----~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~ 100 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQG----LPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEI 100 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCC----CcEEEeCCCEEEecCcccCCCCceEeecCCCHHHH
Confidence 45678999999999999999999999999999999999731 1355566655543211 0111111
Q ss_pred HHHhHHHHHHH--HH---------HHHHhhhh-c-----ccccCCCeEEEEEcCccchhhcChhHHHHHHh--hhccCCc
Q 001335 768 ARFMREEVKRE--LN---------KCIDEAQQ-Y-----IHSISGEKLALIIDGKCLMYALDPSLRVILLN--LSLNCSS 828 (1097)
Q Consensus 768 ~~~~~~~~~~~--~~---------~~~~~~~~-~-----~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~--l~~~~~~ 828 (1097)
.+.+.. ..+. +. ........ . ..........+.+.+... .+ .++.+.+.. +.... .
T Consensus 101 ~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~-~ 175 (271)
T PRK03669 101 RQVLNT-LREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDE--RM-AQFTARLAELGLQFVQ-G 175 (271)
T ss_pred HHHHHH-HHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHH--HH-HHHHHHHHHCCCEEEe-c
Confidence 111110 0000 00 00000000 0 000000011112211110 00 112222221 11111 1
Q ss_pred eEEEEeCccc--HHHHHHHHHcccC------ceEEEecCCCCChhhhhhcCeeEEecCcc-c-hh---hhhhcceeccc
Q 001335 829 VVCCRVSPLQ--KAQVTSLVKKGAR------KITLSIGDGANDVSMIQAAHIGVGISGQE-G-MQ---AVMASDFAIAQ 894 (1097)
Q Consensus 829 vi~~r~sP~q--K~~iv~~lk~~~~------~~vlaiGDG~ND~~ml~~AdvGIam~g~e-~-~~---a~~~AD~vi~~ 894 (1097)
.-+.+++|.. |+.-++.+.++.| ..|+++|||.||++||+.|++||||.+.. . .+ .+..||++...
T Consensus 176 ~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~ 254 (271)
T PRK03669 176 ARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQR 254 (271)
T ss_pred CeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccC
Confidence 1355778765 9999988876533 56999999999999999999999996332 1 11 23468887654
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.7e-08 Score=112.09 Aligned_cols=62 Identities=23% Similarity=0.345 Sum_probs=48.4
Q ss_pred EEeCccc--HHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 832 CRVSPLQ--KAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 832 ~r~sP~q--K~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
....|.. |+..++.+.+..| +.+++|||+.||++|++.|++||+|+++. ..++..||+++.+
T Consensus 191 ~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~-~~lk~~Ad~v~~~ 257 (272)
T PRK10530 191 VDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNAD-DAVKARADLVIGD 257 (272)
T ss_pred EEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCch-HHHHHhCCEEEec
Confidence 3555543 8888887765433 56999999999999999999999996543 3478899998864
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.78 E-value=6.8e-08 Score=101.73 Aligned_cols=121 Identities=21% Similarity=0.226 Sum_probs=88.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
.++.+++.+.++.++++|.+||++||-...-+..+|+.+|+...-...+.+.. +
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-G------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-C-------------------------
Confidence 78999999999999999999999999999999999999999653322222211 0
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEE-eCcccHHHHHHHHHcccC---ce
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR-VSPLQKAQVTSLVKKGAR---KI 853 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r-~sP~qK~~iv~~lk~~~~---~~ 853 (1097)
+++|. +..+ +..+.|...++.+.+..| +.
T Consensus 130 -----------------------~ltG~------------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~ 162 (212)
T COG0560 130 -----------------------KLTGR------------------------VVGPICDGEGKAKALRELAAELGIPLEE 162 (212)
T ss_pred -----------------------EEece------------------------eeeeecCcchHHHHHHHHHHHcCCCHHH
Confidence 12222 3333 344678888866655333 45
Q ss_pred EEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceecc
Q 001335 854 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIA 893 (1097)
Q Consensus 854 vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~ 893 (1097)
+.|+|||.||.|||+.||.+|+++.... ....|+..+.
T Consensus 163 ~~a~gDs~nDlpml~~ag~~ia~n~~~~--l~~~a~~~~~ 200 (212)
T COG0560 163 TVAYGDSANDLPMLEAAGLPIAVNPKPK--LRALADVRIW 200 (212)
T ss_pred eEEEcCchhhHHHHHhCCCCeEeCcCHH--HHHHHHHhcC
Confidence 9999999999999999999999976654 3444544433
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.4e-08 Score=108.52 Aligned_cols=187 Identities=19% Similarity=0.261 Sum_probs=106.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++|++|+++|++++++|||....+..+.+++++.. ..|+.++..+..... +......+..+....
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~-----~~I~~NGa~i~~~~~---~~i~~~~i~~~~~~~ 87 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT-----PFITANGAAVIDDQG---EILYKKPLDLDLVEE 87 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC-----CEEEcCCcEEECCCC---CEEeecCCCHHHHHH
Confidence 477899999999999999999999999999999999988732 345566655443211 111122222222222
Q ss_pred HHHHHHhhhhcccccCCCeE---------------------EEEEc-----Cccchhh---cCh----hHHHHHHh----
Q 001335 779 LNKCIDEAQQYIHSISGEKL---------------------ALIID-----GKCLMYA---LDP----SLRVILLN---- 821 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~---------------------~lvi~-----G~~l~~~---l~~----~l~~~f~~---- 821 (1097)
+.....+............. ..+.+ +.....+ ..+ ++.+.+..
T Consensus 88 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (256)
T TIGR00099 88 ILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELE 167 (256)
T ss_pred HHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhc
Confidence 22222211100000000000 00000 0000000 011 11122211
Q ss_pred --hhccCCceEEEEeCccc--HHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 822 --LSLNCSSVVCCRVSPLQ--KAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 822 --l~~~~~~vi~~r~sP~q--K~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
+.......-+.++.|.. |+..++.+.+..+ ..++++||+.||++|++.|+.|++|.++.. .++..||+++.+
T Consensus 168 ~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~-~~k~~a~~~~~~ 246 (256)
T TIGR00099 168 ENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADE-ELKALADYVTDS 246 (256)
T ss_pred CCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchH-HHHHhCCEEecC
Confidence 11111112345677765 9999998877533 579999999999999999999999965443 388999998764
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.67 E-value=8.6e-08 Score=105.24 Aligned_cols=183 Identities=14% Similarity=0.095 Sum_probs=97.9
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhccc------------CCChHHH
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEE------------RGDPVEI 767 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~------------~~~~~~~ 767 (1097)
..+.+.++|++|+++|++++++|||....+..+.+++|+.. ..|+.++..+..... ..+....
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~-----~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~ 91 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLED-----PFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKI 91 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC-----cEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHH
Confidence 44568999999999999999999999999999999999742 244555544332111 1111111
Q ss_pred HHHhHHHHHHHH------HHH--H---Hhh-hh-----cccccCCCeEEEEEcCccchhhcChhHHHHHHh--hhccCCc
Q 001335 768 ARFMREEVKREL------NKC--I---DEA-QQ-----YIHSISGEKLALIIDGKCLMYALDPSLRVILLN--LSLNCSS 828 (1097)
Q Consensus 768 ~~~~~~~~~~~~------~~~--~---~~~-~~-----~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~--l~~~~~~ 828 (1097)
.+.+.. ..... ... . ... .. ...........+.. ..... +.+.+.+.. +.... +
T Consensus 92 ~~il~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~-s 164 (256)
T TIGR01486 92 RARLEE-LSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW-SEERR----ERFTEALVELGLEVTH-G 164 (256)
T ss_pred HHHHHH-HHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-ChHHH----HHHHHHHHHcCCEEEe-C
Confidence 111110 00000 000 0 000 00 00000000111111 11110 112222221 11111 1
Q ss_pred eEEEEeCccc--HHHHHHHHHccc-----CceEEEecCCCCChhhhhhcCeeEEecCccc--hhhhhh--c-ceeccc
Q 001335 829 VVCCRVSPLQ--KAQVTSLVKKGA-----RKITLSIGDGANDVSMIQAAHIGVGISGQEG--MQAVMA--S-DFAIAQ 894 (1097)
Q Consensus 829 vi~~r~sP~q--K~~iv~~lk~~~-----~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~--~~a~~~--A-D~vi~~ 894 (1097)
..+..+.|.. |+..++.+.++. ...++++||+.||++|++.|++||+|.++.. .+.|.. | +++...
T Consensus 165 ~~~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~ 242 (256)
T TIGR01486 165 NRFYHVLGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPA 242 (256)
T ss_pred CceEEEecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCC
Confidence 1355566655 888888776652 4569999999999999999999999976642 236665 4 476543
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=8.9e-08 Score=107.25 Aligned_cols=129 Identities=25% Similarity=0.270 Sum_probs=90.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.|++.+.|+.|+++|+++.++||.....+..+..++|+..--.+.+.
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~le------------------------------- 229 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELE------------------------------- 229 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEE-------------------------------
Confidence 5889999999999999999999999998888888888888421100000
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEE-EeCcccHHHHHHHHHcccC---ceE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCC-RVSPLQKAQVTSLVKKGAR---KIT 854 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~-r~sP~qK~~iv~~lk~~~~---~~v 854 (1097)
+.+|.- . ..+.. -+..+.|...++.+.+..| ..|
T Consensus 230 ----------------------i~dg~l-t-------------------g~v~g~iv~~k~K~~~L~~la~~lgi~~~qt 267 (322)
T PRK11133 230 ----------------------IMDGKL-T-------------------GNVLGDIVDAQYKADTLTRLAQEYEIPLAQT 267 (322)
T ss_pred ----------------------EECCEE-E-------------------eEecCccCCcccHHHHHHHHHHHcCCChhhE
Confidence 011100 0 00100 0224678888888765433 579
Q ss_pred EEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhHHHHHH
Q 001335 855 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLL 903 (1097)
Q Consensus 855 laiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l~~lll 903 (1097)
+|+|||.||++|++.||+||++...+. .+..||+++.. ..|..+|.
T Consensus 268 IaVGDg~NDl~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~~-~~l~~~l~ 313 (322)
T PRK11133 268 VAIGDGANDLPMIKAAGLGIAYHAKPK--VNEQAQVTIRH-ADLMGVLC 313 (322)
T ss_pred EEEECCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEecC-cCHHHHHH
Confidence 999999999999999999999954444 78999999964 33444433
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.65 E-value=1e-07 Score=99.91 Aligned_cols=117 Identities=18% Similarity=0.152 Sum_probs=84.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.|++++.|+.+++.| ++.++||-....+..+++.+|+..--...+.+...+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57999999999999975 999999999999999999999842111000000000
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
.++|. .. ..+..|..+++.+++ .+..+.++|
T Consensus 121 ----------------------~~tG~------------------------~~--~~~~~K~~~l~~l~~-~~~~~v~vG 151 (203)
T TIGR02137 121 ----------------------RVVGY------------------------QL--RQKDPKRQSVIAFKS-LYYRVIAAG 151 (203)
T ss_pred ----------------------eeECe------------------------ee--cCcchHHHHHHHHHh-hCCCEEEEe
Confidence 11111 11 246789999999976 566899999
Q ss_pred CCCCChhhhhhcCeeEEecCccchhhhhhcceec
Q 001335 859 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAI 892 (1097)
Q Consensus 859 DG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi 892 (1097)
||.||++|++.||+||++..++.. ...+-|+..
T Consensus 152 Ds~nDl~ml~~Ag~~ia~~ak~~~-~~~~~~~~~ 184 (203)
T TIGR02137 152 DSYNDTTMLSEAHAGILFHAPENV-IREFPQFPA 184 (203)
T ss_pred CCHHHHHHHHhCCCCEEecCCHHH-HHhCCCCCc
Confidence 999999999999999999887763 233444443
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.48 E-value=6.2e-07 Score=98.02 Aligned_cols=181 Identities=15% Similarity=0.137 Sum_probs=99.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHH
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVK 776 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1097)
..+..+.+.++|+++++.|++++++|||....+..+.++.++..++ +.|..++..+...............+.+...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~---~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~ 95 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD---IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQ 95 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC---EEEEcCCceEEeCCCCcCCHHHHHHHhcccC
Confidence 3557789999999999999999999999999999999999976543 5566777766542111111111111110000
Q ss_pred -HHHHHHHHhhhhcc--c--ccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCce----EEEEeCcc--cHHHHHHH
Q 001335 777 -RELNKCIDEAQQYI--H--SISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSV----VCCRVSPL--QKAQVTSL 845 (1097)
Q Consensus 777 -~~~~~~~~~~~~~~--~--~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~v----i~~r~sP~--qK~~iv~~ 845 (1097)
..+........... . ......+.+..+....... ..++.+.+......+..+ -+..+.|. .|...++.
T Consensus 96 ~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~ 174 (249)
T TIGR01485 96 RDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEV-IKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQY 174 (249)
T ss_pred HHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHH-HHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHH
Confidence 11111111111000 0 0011122222222111111 112223332211111111 23356664 49999998
Q ss_pred HHccc---CceEEEecCCCCChhhhhh-cCeeEEecCccc
Q 001335 846 VKKGA---RKITLSIGDGANDVSMIQA-AHIGVGISGQEG 881 (1097)
Q Consensus 846 lk~~~---~~~vlaiGDG~ND~~ml~~-AdvGIam~g~e~ 881 (1097)
+.+.. ...|+++||+.||++|++. ++.||+|.++..
T Consensus 175 l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~ 214 (249)
T TIGR01485 175 LLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQE 214 (249)
T ss_pred HHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHH
Confidence 87643 3679999999999999998 679999966544
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.3e-06 Score=94.80 Aligned_cols=177 Identities=16% Similarity=0.168 Sum_probs=94.9
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHH-HHHHHHHHHH
Q 001335 706 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREE-VKRELNKCID 784 (1097)
Q Consensus 706 e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 784 (1097)
++++ ++++||+++++|||....+..+...+++..+ .+++..++..+.................+. ...++.....
T Consensus 22 ~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~---~~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (236)
T TIGR02471 22 ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSP---DVLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALA 97 (236)
T ss_pred HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCC---CEEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHh
Confidence 5666 6999999999999999999999999988532 245666776553211110000000000000 0001111111
Q ss_pred hhhhc-ccccC-CC--eEEEEEcCccchhhcChhHHHHHHhhhccCCceEE----EEeCcc--cHHHHHHHHHcccC---
Q 001335 785 EAQQY-IHSIS-GE--KLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVC----CRVSPL--QKAQVTSLVKKGAR--- 851 (1097)
Q Consensus 785 ~~~~~-~~~~~-~~--~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~----~r~sP~--qK~~iv~~lk~~~~--- 851 (1097)
..... ..... .. .+.+..+.+.... + .++.+.+......+..+.. -.+.|. .|...++.+.++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~ 175 (236)
T TIGR02471 98 DIPGLTLQDDQEQGPFKISYLLDPEGEPI-L-PQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPL 175 (236)
T ss_pred cCCCcEeCChhcCCCeeEEEEECcccchH-H-HHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCH
Confidence 11100 00001 11 1222222221100 0 1122222221111111111 256666 49999998876533
Q ss_pred ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcc
Q 001335 852 KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASD 889 (1097)
Q Consensus 852 ~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD 889 (1097)
..++++||+.||++|++.|+.||+|+++... ++..||
T Consensus 176 ~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~ 212 (236)
T TIGR02471 176 EQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRH 212 (236)
T ss_pred HHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhc
Confidence 3689999999999999999999999766544 788899
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=6.1e-07 Score=97.76 Aligned_cols=56 Identities=21% Similarity=0.253 Sum_probs=42.9
Q ss_pred EEEeCccc--HHHHHHHHHcccCceEEEecC----CCCChhhhhhc-CeeEEecCccchhhhhhc
Q 001335 831 CCRVSPLQ--KAQVTSLVKKGARKITLSIGD----GANDVSMIQAA-HIGVGISGQEGMQAVMAS 888 (1097)
Q Consensus 831 ~~r~sP~q--K~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~A-dvGIam~g~e~~~a~~~A 888 (1097)
+.++.|.. |+.-++.+.+. .+.|++||| |.||++||+.| -.|+++.+++.. .|..+
T Consensus 179 ~leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~-~~~~~ 241 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDT-IKILK 241 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHH-HHHHH
Confidence 45677765 99999999884 678999999 99999999976 567777666653 44433
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=98.45 E-value=1e-06 Score=91.28 Aligned_cols=137 Identities=14% Similarity=0.041 Sum_probs=95.4
Q ss_pred chhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhhcccccccCHHHHHHHHHHHHHHHHHHHHhhh-hcCCC
Q 001335 945 FYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSAT 1023 (1097)
Q Consensus 945 ~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~-~~~~~ 1023 (1097)
++++.|++|.|++.+.+|++++|.. ++++.+|++|+ +.+++.+++.+.+......|++++++.++..+ .....
T Consensus 3 Pl~~~qiL~inli~d~~~a~al~~e---~~~~~im~r~P---r~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~ 76 (182)
T PF00689_consen 3 PLTPIQILWINLITDLLPALALGFE---PPDPDIMKRPP---RDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIF 76 (182)
T ss_dssp SS-HHHHHHHHHTTTHHHHHHGGGS---S-STTGGGS------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHST
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhcC---cchhhhhhccc---cccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4688999999999999999999873 33444555555 47888999999999999999999999987776 33212
Q ss_pred ccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcc-c------chHHHHHHHHHHHHHHHHHHHHHhccCC
Q 001335 1024 GQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMMCN-T------ITRFHYITVGGSILAWFLFVFLYTGIMT 1087 (1097)
Q Consensus 1024 ~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~------~~~~~~~~~~~si~~~~~~~~~~~~~~~ 1087 (1097)
+....+...+.....|++|+++++...+......+ . ....++..+++++++.++++.+..++|.
T Consensus 77 ~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~ 147 (182)
T PF00689_consen 77 GWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPG 147 (182)
T ss_dssp CSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTT
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchh
Confidence 22111111124568899999998877776543322 1 2345678889999999999888888873
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.2e-06 Score=93.94 Aligned_cols=125 Identities=24% Similarity=0.311 Sum_probs=87.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++++.++.|+++|+++.++||.....+..+.+.+|+..--...+... ++
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~-~~-------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVE-DG-------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEE-CC--------------------------
Confidence 589999999999999999999999999999999999998843110000000 00
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEE-eCcccHHHHHHHHHccc---CceE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR-VSPLQKAQVTSLVKKGA---RKIT 854 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r-~sP~qK~~iv~~lk~~~---~~~v 854 (1097)
.++|. +.++ ..++.|..+++.+.+.. ...+
T Consensus 138 ----------------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 171 (219)
T TIGR00338 138 ----------------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENT 171 (219)
T ss_pred ----------------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHE
Confidence 00000 1111 11233666666554322 2468
Q ss_pred EEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhH
Q 001335 855 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFL 898 (1097)
Q Consensus 855 laiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l 898 (1097)
++|||+.+|+.|.+.||++|++.+.+. +..+||+++.+.++-
T Consensus 172 i~iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~~~ 213 (219)
T TIGR00338 172 VAVGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKDLT 213 (219)
T ss_pred EEEECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCCHH
Confidence 899999999999999999999977654 678999999987653
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.1e-06 Score=97.39 Aligned_cols=42 Identities=14% Similarity=0.088 Sum_probs=38.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
..+.+++.++|++|++.|++++++||+....+..+++++|+.
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 346677999999999999999999999999999999999974
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.3e-06 Score=93.65 Aligned_cols=52 Identities=19% Similarity=0.185 Sum_probs=43.1
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchh
Q 001335 702 EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRD 757 (1097)
Q Consensus 702 ~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~ 757 (1097)
+.+.++|++|+++||+++++||+....+..+.+.+++.. ...|+.|+..+.+
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~----~~~I~~NGa~i~~ 70 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTG----DPYIAENGAAIHL 70 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC----CcEEEeCCcEEEc
Confidence 348899999999999999999999999999999999731 2467777766554
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.36 E-value=4.8e-07 Score=96.80 Aligned_cols=56 Identities=13% Similarity=0.009 Sum_probs=44.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchh
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRD 757 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~ 757 (1097)
.+..-+++.++|++|+++|++++++||+....+..+.+++|+.. ..|+.|+..+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~-----~~I~~NGa~I~~ 68 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP-----PFIVENGGAIFI 68 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-----cEEEcCCcEEEe
Confidence 34556679999999999999999999999999999999999743 245555554443
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.7e-06 Score=92.41 Aligned_cols=182 Identities=11% Similarity=0.148 Sum_probs=98.9
Q ss_pred ccCCChHHHHHHHHH-cCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 699 KLQEGVPACIETLAR-AGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~-aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
.+-+++.++|++|++ .|++++++|||....+..+...+++ ..+..++..+.+...... ...+..+...
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~-------~~i~~nGa~i~~~~~~~~----~~~l~~~~~~ 104 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRF-------PLAGVHGAERRDINGKTH----IVHLPDAIAR 104 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccc-------eEEEeCCCeeecCCCCee----eccCChhHHH
Confidence 455789999999998 7999999999999999888766553 133444443332111100 0112222222
Q ss_pred HHHHHHHh-hhh-cccccCCCeEEEEEcCccchhhcChhHHHHHHhhhc------cCCceEEEEeCcc--cHHHHHHHHH
Q 001335 778 ELNKCIDE-AQQ-YIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSL------NCSSVVCCRVSPL--QKAQVTSLVK 847 (1097)
Q Consensus 778 ~~~~~~~~-~~~-~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~------~~~~vi~~r~sP~--qK~~iv~~lk 847 (1097)
.+.....+ ... +......+...++........ ..+.+......+.. .....-+.++.|. .|+..++.+.
T Consensus 105 ~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll 183 (266)
T PRK10187 105 DISVQLHTALAQLPGAELEAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFM 183 (266)
T ss_pred HHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHH
Confidence 22222211 100 000011122222322211110 01111111111111 1122244566665 5999988876
Q ss_pred ccc---CceEEEecCCCCChhhhhhc----CeeEEecCccchhhhhhcceeccchHh
Q 001335 848 KGA---RKITLSIGDGANDVSMIQAA----HIGVGISGQEGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 848 ~~~---~~~vlaiGDG~ND~~ml~~A----dvGIam~g~e~~~a~~~AD~vi~~~~~ 897 (1097)
+.. ...++++||+.||.+|++.+ +.||+|+++. ..|++.+.+-.-
T Consensus 184 ~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~-----~~A~~~l~~~~~ 235 (266)
T PRK10187 184 QEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA-----TQASWRLAGVPD 235 (266)
T ss_pred HhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC-----CcCeEeCCCHHH
Confidence 543 35799999999999999999 9999995433 468888887553
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.1e-06 Score=84.90 Aligned_cols=96 Identities=16% Similarity=0.187 Sum_probs=72.3
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhh
Q 001335 707 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEA 786 (1097)
Q Consensus 707 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1097)
+|+.|++.|+++.|+||+....+..+.+..|+...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------------------
Confidence 89999999999999999999999999999887320
Q ss_pred hhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEEEecCCCCC
Q 001335 787 QQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITLSIGDGAND 863 (1097)
Q Consensus 787 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND 863 (1097)
+.. ...|...++.+.+. ..+.++++||+.||
T Consensus 71 --------------------------------------------~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D 104 (154)
T TIGR01670 71 --------------------------------------------YQG--QSNKLIAFSDILEKLALAPENVAYIGDDLID 104 (154)
T ss_pred --------------------------------------------Eec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 000 02234444333321 33579999999999
Q ss_pred hhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 864 VSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 864 ~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
++|++.|++++++.+.... .+..||+++..
T Consensus 105 ~~~~~~ag~~~~v~~~~~~-~~~~a~~i~~~ 134 (154)
T TIGR01670 105 WPVMEKVGLSVAVADAHPL-LIPRADYVTRI 134 (154)
T ss_pred HHHHHHCCCeEecCCcCHH-HHHhCCEEecC
Confidence 9999999999999655433 77889998863
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.2e-06 Score=84.39 Aligned_cols=129 Identities=19% Similarity=0.334 Sum_probs=86.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCC--eEEEEecCCccchhcccCCChHHHHHHhHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEM--KQFIITSETNAIRDVEERGDPVEIARFMREEVK 776 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~--~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1097)
.+-+|++|..+.|++.|.++.++||--..-+.++|.++||-..+- +.+....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~-------------------------- 141 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDK-------------------------- 141 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeecc--------------------------
Confidence 467999999999999999999999999999999999999954321 0111111
Q ss_pred HHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc-cCceEE
Q 001335 777 RELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG-ARKITL 855 (1097)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~-~~~~vl 855 (1097)
+|+-+..-. --.-+....|+.+++.+++. ..+.++
T Consensus 142 --------------------------~Gk~~gfd~------------------~~ptsdsggKa~~i~~lrk~~~~~~~~ 177 (227)
T KOG1615|consen 142 --------------------------DGKYLGFDT------------------NEPTSDSGGKAEVIALLRKNYNYKTIV 177 (227)
T ss_pred --------------------------CCccccccc------------------CCccccCCccHHHHHHHHhCCChheeE
Confidence 111000000 00001233599999999875 457899
Q ss_pred EecCCCCChhhhhhcCeeEEecCccchh-hhhhcceeccchHh
Q 001335 856 SIGDGANDVSMIQAAHIGVGISGQEGMQ-AVMASDFAIAQFRF 897 (1097)
Q Consensus 856 aiGDG~ND~~ml~~AdvGIam~g~e~~~-a~~~AD~vi~~~~~ 897 (1097)
|||||+||++|+..||.=+|..|+...+ .+..|+.-+.+|..
T Consensus 178 mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 178 MVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred EecCCccccccCCchhhhhccCCceEcHhhHhccHHHHHHHHH
Confidence 9999999999999987766665543321 45556555555443
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.30 E-value=4.9e-06 Score=96.87 Aligned_cols=179 Identities=18% Similarity=0.116 Sum_probs=98.4
Q ss_pred hHHHH-HHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH-HHH
Q 001335 704 VPACI-ETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE-LNK 781 (1097)
Q Consensus 704 v~e~I-~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 781 (1097)
..+++ +++++.|+.++++|||.+..+..+.++.++..++ +.|..++..+...............+....... +..
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~---~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~ 109 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPD---ITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVE 109 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCC---EEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHH
Confidence 34455 8889999999999999999999999999987765 556667766542111111111111111110000 111
Q ss_pred HHHhhhhcc-ccc---CCCeEEEEEcCccchhhcChhHHHHHHhhhccC----CceEEEEeCccc--HHHHHHHHHccc-
Q 001335 782 CIDEAQQYI-HSI---SGEKLALIIDGKCLMYALDPSLRVILLNLSLNC----SSVVCCRVSPLQ--KAQVTSLVKKGA- 850 (1097)
Q Consensus 782 ~~~~~~~~~-~~~---~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~----~~vi~~r~sP~q--K~~iv~~lk~~~- 850 (1097)
......... ... ...++.+..+.+.... ..+.+.+.+......+ ..--+.++.|.. |+..++.+.+..
T Consensus 110 ~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~-~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 110 ETSKFPELKLQPETEQRPHKVSFYVDKKKAQE-VIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHhcCCCcccCCcccCCCeEEEEEechHHhHH-HHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 111111000 000 1112223333222211 1123333332211111 122356778876 999999887653
Q ss_pred -----CceEEEecCCCCChhhhhhcC-eeEEecCccchhhhhh
Q 001335 851 -----RKITLSIGDGANDVSMIQAAH-IGVGISGQEGMQAVMA 887 (1097)
Q Consensus 851 -----~~~vlaiGDG~ND~~ml~~Ad-vGIam~g~e~~~a~~~ 887 (1097)
...|+++||+.||++||+.|+ .||+|+++... .+..
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~~ 230 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQW 230 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHHH
Confidence 247999999999999999999 69999665543 5544
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.5e-06 Score=86.25 Aligned_cols=97 Identities=15% Similarity=0.158 Sum_probs=72.9
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHh
Q 001335 706 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDE 785 (1097)
Q Consensus 706 e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1097)
..|+.|+++|+++.|+|+.....+..+...+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 58999999999999999999999999999999842
Q ss_pred hhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeC--cccHHHHHHHHHcccCceEEEecCCCCC
Q 001335 786 AQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVS--PLQKAQVTSLVKKGARKITLSIGDGAND 863 (1097)
Q Consensus 786 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~s--P~qK~~iv~~lk~~~~~~vlaiGDG~ND 863 (1097)
.|.... |+-...+++.+.- ....+++|||+.||
T Consensus 76 --------------------------------------------~f~~~kpkp~~~~~~~~~l~~-~~~ev~~iGD~~nD 110 (169)
T TIGR02726 76 --------------------------------------------FHEGIKKKTEPYAQMLEEMNI-SDAEVCYVGDDLVD 110 (169)
T ss_pred --------------------------------------------EEecCCCCHHHHHHHHHHcCc-CHHHEEEECCCHHH
Confidence 111111 1112222233321 23569999999999
Q ss_pred hhhhhhcCeeEEecCccchhhhhhcceecc
Q 001335 864 VSMIQAAHIGVGISGQEGMQAVMASDFAIA 893 (1097)
Q Consensus 864 ~~ml~~AdvGIam~g~e~~~a~~~AD~vi~ 893 (1097)
++|++.|+++++|.++... ++..|+++..
T Consensus 111 i~~~~~ag~~~am~nA~~~-lk~~A~~I~~ 139 (169)
T TIGR02726 111 LSMMKRVGLAVAVGDAVAD-VKEAAAYVTT 139 (169)
T ss_pred HHHHHHCCCeEECcCchHH-HHHhCCEEcC
Confidence 9999999999999766543 8899999875
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.3e-06 Score=100.74 Aligned_cols=39 Identities=5% Similarity=-0.029 Sum_probs=35.8
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 738 (1097)
.-+.+.++|++|+++||+++++||+....+..+++++++
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 345689999999999999999999999999999999986
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=4.6e-06 Score=86.30 Aligned_cols=113 Identities=19% Similarity=0.224 Sum_probs=79.6
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHh
Q 001335 706 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDE 785 (1097)
Q Consensus 706 e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1097)
.+|+.|+++|+++.++||+....+..+++++|+...
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~-------------------------------------------- 90 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL-------------------------------------------- 90 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee--------------------------------------------
Confidence 689999999999999999999999999999987320
Q ss_pred hhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEEEecCCCC
Q 001335 786 AQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITLSIGDGAN 862 (1097)
Q Consensus 786 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~N 862 (1097)
|. ..+.|...++.+.+. ....+++|||+.|
T Consensus 91 ---------------------------------------------f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~ 123 (183)
T PRK09484 91 ---------------------------------------------YQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLI 123 (183)
T ss_pred ---------------------------------------------ec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence 00 012233333333222 2357999999999
Q ss_pred ChhhhhhcCeeEEecCccchhhhhhcceecc------chHhHHHH-HHhhhhhhH
Q 001335 863 DVSMIQAAHIGVGISGQEGMQAVMASDFAIA------QFRFLTDL-LLVHGRWSY 910 (1097)
Q Consensus 863 D~~ml~~AdvGIam~g~e~~~a~~~AD~vi~------~~~~l~~l-ll~~Gr~~~ 910 (1097)
|+.|++.|++++++...+. .++..||+++. ..+-+..+ +..-|+|-+
T Consensus 124 D~~~a~~aG~~~~v~~~~~-~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~~~ 177 (183)
T PRK09484 124 DWPVMEKVGLSVAVADAHP-LLLPRADYVTRIAGGRGAVREVCDLLLLAQGKLDE 177 (183)
T ss_pred HHHHHHHCCCeEecCChhH-HHHHhCCEEecCCCCCCHHHHHHHHHHHhcCChhh
Confidence 9999999999998854433 36778999985 34445544 334566543
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.16 E-value=6.8e-06 Score=88.53 Aligned_cols=54 Identities=13% Similarity=0.077 Sum_probs=43.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccch
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIR 756 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~ 756 (1097)
+..-+.+.++|++|+++||.++++||+.......+.+++++.. ..|+.|+..+.
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~-----p~I~eNGA~I~ 70 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH-----PFICEDGSAIY 70 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC-----eEEEeCCcEEE
Confidence 3456679999999999999999999999999999999999742 24555554443
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.3e-05 Score=84.60 Aligned_cols=118 Identities=20% Similarity=0.255 Sum_probs=79.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++++++.++++.|++.|+++.++||-....+..++..+|+..--...+.....+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999999632100000000000
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHccc---CceEE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA---RKITL 855 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~---~~~vl 855 (1097)
...+ ..+....|..|..+++.+.+.. .+.++
T Consensus 134 ----------------------~~~p------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i 167 (201)
T TIGR01491 134 ----------------------FIQP------------------------DGIVRVTFDNKGEAVERLKRELNPSLTETV 167 (201)
T ss_pred ----------------------eEec------------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEE
Confidence 0000 0222344666877776664422 34699
Q ss_pred EecCCCCChhhhhhcCeeEEecCccchhhhhhcc
Q 001335 856 SIGDGANDVSMIQAAHIGVGISGQEGMQAVMASD 889 (1097)
Q Consensus 856 aiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD 889 (1097)
++||+.||++|++.||+++++.+... ....++|
T Consensus 168 ~iGDs~~D~~~a~~ag~~~a~~~~~~-~~~~a~~ 200 (201)
T TIGR01491 168 AVGDSKNDLPMFEVADISISLGDEGH-ADYLAKD 200 (201)
T ss_pred EEcCCHhHHHHHHhcCCeEEECCCcc-chhhccc
Confidence 99999999999999999999944332 1444444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.2e-05 Score=83.04 Aligned_cols=126 Identities=17% Similarity=0.166 Sum_probs=86.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.||++++++.|+++ +++.++||.....+..+...+|+...-...+....++
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 4689999999999999 9999999999999999999999842110001000000
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
.+.|. . -..|..|...++.++. .+..++|||
T Consensus 121 ----------------------~i~~~------------------------~--~~~p~~k~~~l~~~~~-~~~~~v~iG 151 (205)
T PRK13582 121 ----------------------MITGY------------------------D--LRQPDGKRQAVKALKS-LGYRVIAAG 151 (205)
T ss_pred ----------------------eEECc------------------------c--ccccchHHHHHHHHHH-hCCeEEEEe
Confidence 00000 0 0136678888887776 567899999
Q ss_pred CCCCChhhhhhcCeeEEecCccchhhhhhcce-eccchHhHHHH
Q 001335 859 DGANDVSMIQAAHIGVGISGQEGMQAVMASDF-AIAQFRFLTDL 901 (1097)
Q Consensus 859 DG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~-vi~~~~~l~~l 901 (1097)
||.||+.|.++|++||.....+.. ....+++ ++.+++-+..+
T Consensus 152 Ds~~D~~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 152 DSYNDTTMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred CCHHHHHHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 999999999999999987554432 2234555 67776654433
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=97.98 E-value=2e-05 Score=82.33 Aligned_cols=39 Identities=23% Similarity=0.250 Sum_probs=36.0
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 702 EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 702 ~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
+++++.|+.++++|++++|+||.....+.++++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 666699999999999999999999999999999999854
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.1e-05 Score=83.15 Aligned_cols=169 Identities=20% Similarity=0.212 Sum_probs=86.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccC---CChHHHHHHhHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEER---GDPVEIARFMREEV 775 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 775 (1097)
++.+.+.++|++|++.|++++++||+....+..+..+++ ..++..++..+...... .........+..
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~-------~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~-- 87 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP-------LPLIAENGALIFYPGEILYIEPSDVFEEILGI-- 87 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC-------CCEEECCCcEEEECCEEEEEcccccHHHHHHh--
Confidence 467889999999999999999999999999999988733 22444444443321000 000000000000
Q ss_pred HHHHHHHHHhhhh-cc---cccCCCeEEEEEcCccchhhcChhHHHHHHhhh-------ccCCceEEEEeCcc--cHHHH
Q 001335 776 KRELNKCIDEAQQ-YI---HSISGEKLALIIDGKCLMYALDPSLRVILLNLS-------LNCSSVVCCRVSPL--QKAQV 842 (1097)
Q Consensus 776 ~~~~~~~~~~~~~-~~---~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~-------~~~~~vi~~r~sP~--qK~~i 842 (1097)
...+......... +. .........+...+..........+........ ......-+..+.|. .|...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~ 167 (204)
T TIGR01484 88 KEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSA 167 (204)
T ss_pred hhhcCceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHH
Confidence 0011000000000 00 000111111111111000001111222221111 11112234466674 49999
Q ss_pred HHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEe
Q 001335 843 TSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGI 876 (1097)
Q Consensus 843 v~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam 876 (1097)
++.+.+..+ ..++++||+.||.+|++.|++||+|
T Consensus 168 ~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 168 LQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 988876433 5699999999999999999999987
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.86 E-value=9.4e-05 Score=79.46 Aligned_cols=41 Identities=17% Similarity=0.404 Sum_probs=38.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.|+++++++.|+++|+++.|+||.....+..++..+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999984
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00033 Score=88.46 Aligned_cols=184 Identities=16% Similarity=0.166 Sum_probs=95.1
Q ss_pred cCCChHHHHHHHHH-cCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCCh-HHHHHHhHHHHHH
Q 001335 700 LQEGVPACIETLAR-AGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDP-VEIARFMREEVKR 777 (1097)
Q Consensus 700 lr~~v~e~I~~L~~-aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 777 (1097)
+.+++.++|++|.+ .|+.|+++||+............++ ..+..++..+......... .......++.+..
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l-------~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~ 587 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPI-------HLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRP 587 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCe-------EEEEeCCEEEeCCCCceEECCCcchhHHHHHHH
Confidence 56788899999999 6999999999999988877654432 2344444433211000000 0000001111111
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEc--Cc--cchhhcChhHHHHHHhhhccCC-----ceEEEEeCcc--cHHHHHHHH
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIID--GK--CLMYALDPSLRVILLNLSLNCS-----SVVCCRVSPL--QKAQVTSLV 846 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~--G~--~l~~~l~~~l~~~f~~l~~~~~-----~vi~~r~sP~--qK~~iv~~l 846 (1097)
-+......... .....+...+... .. .+.....+++.+.+........ ..-+.++.|. .|+..++.+
T Consensus 588 il~~~~~~~~g--s~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~l 665 (726)
T PRK14501 588 ILEEFVDRTPG--SFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRL 665 (726)
T ss_pred HHHHHHhcCCC--cEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHH
Confidence 11111111100 0001111222221 11 1111111123333322211111 1123455665 599999988
Q ss_pred Hcc-cCceEEEecCCCCChhhhhhc---CeeEEecCccchhhhhhcceeccchHh
Q 001335 847 KKG-ARKITLSIGDGANDVSMIQAA---HIGVGISGQEGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 847 k~~-~~~~vlaiGDG~ND~~ml~~A---dvGIam~g~e~~~a~~~AD~vi~~~~~ 897 (1097)
.+. ....++++||+.||.+|++.+ +.+|+|++ ++.+|++.+.+-+-
T Consensus 666 l~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~~~~e 715 (726)
T PRK14501 666 LEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLPSQRE 715 (726)
T ss_pred HhcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCCCHHH
Confidence 764 235799999999999999997 57777744 34689999987544
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00011 Score=78.39 Aligned_cols=138 Identities=11% Similarity=0.127 Sum_probs=84.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-+++||+++.++.|++.|+++.|+||.....+..+...++... .. .. +.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i--~~-n~------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RI--YC-NE------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cE--Ee-ce-------------------------
Confidence 4799999999999999999999999999988888888764321 11 00 00
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceE-EEEeCcccHHHHHHHHHcccCceEEE
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVV-CCRVSPLQKAQVTSLVKKGARKITLS 856 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi-~~r~sP~qK~~iv~~lk~~~~~~vla 856 (1097)
+.++|..+..... + +... +.......|..+++.++. ....+++
T Consensus 118 ----------------------~~~~~~~~~~~~p-~------------~~~~~~~~~cg~~K~~~l~~~~~-~~~~~i~ 161 (214)
T TIGR03333 118 ----------------------ADFSNEYIHIDWP-H------------PCDGTCQNQCGCCKPSLIRKLSE-PNDYHIV 161 (214)
T ss_pred ----------------------eEeeCCeeEEeCC-C------------CCccccccCCCCCHHHHHHHHhh-cCCcEEE
Confidence 0111111110000 0 0000 001113579999998876 5667899
Q ss_pred ecCCCCChhhhhhcCeeEEecC-ccchhhhhhcceeccchHhHHHHH
Q 001335 857 IGDGANDVSMIQAAHIGVGISG-QEGMQAVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 857 iGDG~ND~~ml~~AdvGIam~g-~e~~~a~~~AD~vi~~~~~l~~ll 902 (1097)
||||.||+.|.+.||+.++-.. .+..+-...+.+...+|.-+...|
T Consensus 162 iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 162 IGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred EeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHH
Confidence 9999999999999999776431 111112223444456666555543
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.72 E-value=8.9e-05 Score=78.24 Aligned_cols=43 Identities=14% Similarity=0.013 Sum_probs=39.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
..++++++.+.|+.+++.|++++++||-....+..+++.+|+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~ 127 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID 127 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc
Confidence 4578999999999999999999999999999999999999984
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=5.4e-05 Score=72.49 Aligned_cols=97 Identities=16% Similarity=0.248 Sum_probs=73.2
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHh
Q 001335 706 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDE 785 (1097)
Q Consensus 706 e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1097)
..|+.|.++||++.++||++..-+..-|+++||-. +.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~-----~~-------------------------------------- 78 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH-----LY-------------------------------------- 78 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce-----ee--------------------------------------
Confidence 57999999999999999999999999999999831 00
Q ss_pred hhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEEEecCCCC
Q 001335 786 AQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITLSIGDGAN 862 (1097)
Q Consensus 786 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~N 862 (1097)
-| .++|....+.+.+. .-..|+.+||-.|
T Consensus 79 -----------------qG-------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~ 110 (170)
T COG1778 79 -----------------QG-------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLV 110 (170)
T ss_pred -----------------ec-------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccc
Confidence 00 12343333333322 2356999999999
Q ss_pred ChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 863 DVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 863 D~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
|.|+|+..+.+++..++... .++.||+++..
T Consensus 111 Dlpvm~~vGls~a~~dAh~~-v~~~a~~Vt~~ 141 (170)
T COG1778 111 DLPVMEKVGLSVAVADAHPL-LKQRADYVTSK 141 (170)
T ss_pred cHHHHHHcCCcccccccCHH-HHHhhHhhhhc
Confidence 99999999999999666544 77889998753
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00013 Score=75.19 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=37.7
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
+++++++.++.+++.|++++++||.....+..++..+|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999999874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0003 Score=75.24 Aligned_cols=39 Identities=13% Similarity=0.258 Sum_probs=36.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 738 (1097)
+++||+.+.++.|++.|+++.|+||-....+..+.+.. +
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~ 112 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-I 112 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-C
Confidence 68999999999999999999999999999999988887 5
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00033 Score=72.77 Aligned_cols=42 Identities=12% Similarity=0.081 Sum_probs=38.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 478999999999999999999999999999999999888874
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0088 Score=71.00 Aligned_cols=41 Identities=22% Similarity=0.175 Sum_probs=38.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++++++.+.+++++++|++++++|+-....+..+++..|+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF 112 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF 112 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999999999983
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00049 Score=74.81 Aligned_cols=172 Identities=20% Similarity=0.203 Sum_probs=94.3
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHH-HHHHHHHHHh
Q 001335 707 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEV-KRELNKCIDE 785 (1097)
Q Consensus 707 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 785 (1097)
.++...+.++.++++||++.+.+..+.++.++..+ .+.|+..+.++..-..........+.+.... ...+......
T Consensus 27 ~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~P---d~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~ 103 (247)
T PF05116_consen 27 LLEQQARPEILFVYVTGRSLESVLRLLREYNLPQP---DYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAE 103 (247)
T ss_dssp HHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE----SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHC
T ss_pred HHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCC---CEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHH
Confidence 33334577899999999999999999999998654 4778888877665221111112222222211 1222233333
Q ss_pred hhhc----ccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCC----ceEEEEeCccc--HHHHHHHHHccc---Cc
Q 001335 786 AQQY----IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCS----SVVCCRVSPLQ--KAQVTSLVKKGA---RK 852 (1097)
Q Consensus 786 ~~~~----~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~----~vi~~r~sP~q--K~~iv~~lk~~~---~~ 852 (1097)
+... ............++.......+ +++...+......++ .--+.++.|.. |...++.+++.. ..
T Consensus 104 ~~~l~~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~ 182 (247)
T PF05116_consen 104 LPGLRPQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPE 182 (247)
T ss_dssp HCCEEEGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GG
T ss_pred hhCcccCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHH
Confidence 2211 0111122344444444332211 234444433222222 12245666654 999999998753 35
Q ss_pred eEEEecCCCCChhhhhhcCeeEEecCccch
Q 001335 853 ITLSIGDGANDVSMIQAAHIGVGISGQEGM 882 (1097)
Q Consensus 853 ~vlaiGDG~ND~~ml~~AdvGIam~g~e~~ 882 (1097)
.|+++||+.||.+||..++-||.+.+++..
T Consensus 183 ~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 183 QVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp GEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred HEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 688899999999999999999999776553
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00022 Score=69.36 Aligned_cols=44 Identities=23% Similarity=0.265 Sum_probs=40.4
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 696 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 696 ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
-..++.+++++.+++|++.|++++++||.....+....+.+|+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 34588999999999999999999999999999999999999874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00073 Score=73.41 Aligned_cols=50 Identities=20% Similarity=0.330 Sum_probs=41.4
Q ss_pred EEEEeCccc--HHHHHHHHHcccCceEEEecC----CCCChhhhhh-cCeeEEecCccc
Q 001335 830 VCCRVSPLQ--KAQVTSLVKKGARKITLSIGD----GANDVSMIQA-AHIGVGISGQEG 881 (1097)
Q Consensus 830 i~~r~sP~q--K~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~-AdvGIam~g~e~ 881 (1097)
.+.++.|.. |+..++.++ ....|+|+|| |.||.+||+. -=.|+.+++.+.
T Consensus 179 ~~iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 179 ISFDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 466777765 999999999 4678999999 8999999997 555899987765
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00081 Score=72.25 Aligned_cols=42 Identities=21% Similarity=0.260 Sum_probs=38.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
-++.+|+.+.++.|++.|+++.++||.....+..+.+..|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468899999999999999999999999999999999988874
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0018 Score=69.22 Aligned_cols=44 Identities=25% Similarity=0.283 Sum_probs=41.1
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
+.++-++++++++.|+++|++..++|++....+..+.+..|+..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~ 130 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD 130 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc
Confidence 56789999999999999999999999999999999999999854
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0016 Score=68.89 Aligned_cols=41 Identities=24% Similarity=0.334 Sum_probs=37.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|+++|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 78899999999999999999999999988888888888874
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0017 Score=69.02 Aligned_cols=41 Identities=20% Similarity=0.237 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|+++|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 68899999999999999999999999999999999988874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0018 Score=71.59 Aligned_cols=41 Identities=12% Similarity=0.212 Sum_probs=36.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 738 (1097)
.++.+++.++++.|+++|+++.++||.....+..+....|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 47889999999999999999999999988888888777776
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0047 Score=68.11 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=38.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.|++.++++.|++.|+++.|+|+.....+..+.+.+|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999999999884
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.01 Score=64.50 Aligned_cols=65 Identities=12% Similarity=0.151 Sum_probs=47.2
Q ss_pred eCcccHHHHHHHHHccc---CceEEEecCCCCChhhhhhc--------CeeEEecCccchhhhhhcceeccchHhHHHH
Q 001335 834 VSPLQKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAA--------HIGVGISGQEGMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 834 ~sP~qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~A--------dvGIam~g~e~~~a~~~AD~vi~~~~~l~~l 901 (1097)
-.+..|...++.+.+.. ...++++||+.||..|++.+ ..||.|. ++. .+..|++++.+..-+..+
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g~-~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SGS-KKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cCC-cCCCceEeCCCHHHHHHH
Confidence 34446998888776542 34799999999999999999 4677774 111 456799999887664443
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.045 Score=62.50 Aligned_cols=68 Identities=13% Similarity=0.242 Sum_probs=48.7
Q ss_pred EEEeCcc---cHHHHHHHHHcccC-----c-eEEEecCCCCChhhhhh-----cCeeEEecCccchhhhhhcceeccchH
Q 001335 831 CCRVSPL---QKAQVTSLVKKGAR-----K-ITLSIGDGANDVSMIQA-----AHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 831 ~~r~sP~---qK~~iv~~lk~~~~-----~-~vlaiGDG~ND~~ml~~-----AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
+.++.|. .|+..++.+.+..+ . .++++||+.||..|++. +++||+|++... ...|+|.+.+-.
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~ 367 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPS 367 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHH
Confidence 3466663 79999998876432 1 25899999999999996 588998854332 236889888866
Q ss_pred hHHHH
Q 001335 897 FLTDL 901 (1097)
Q Consensus 897 ~l~~l 901 (1097)
-+..+
T Consensus 368 eV~~~ 372 (384)
T PLN02580 368 EVMEF 372 (384)
T ss_pred HHHHH
Confidence 55444
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0049 Score=65.60 Aligned_cols=41 Identities=22% Similarity=0.113 Sum_probs=37.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+|+.++++.|+++|+++.++||.....+..+.+..|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 47899999999999999999999999999999888888874
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0054 Score=66.05 Aligned_cols=41 Identities=22% Similarity=0.123 Sum_probs=36.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+|+.+.++.|++.|+++.++|+.....+..+-...|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 67899999999999999999999999888887777777764
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0066 Score=64.24 Aligned_cols=110 Identities=15% Similarity=0.138 Sum_probs=74.3
Q ss_pred ccCCChHHHHH-HHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 699 KLQEGVPACIE-TLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 699 ~lr~~v~e~I~-~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
.+.|++.++|+ .+++.|++++|+|+-....+..+|+..++.... ..+....+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57999999996 788899999999999999999999987664422 12111100
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEe
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 857 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlai 857 (1097)
+.+|.. +..-.+..++|..-++..-........+-
T Consensus 147 -----------------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aY 181 (210)
T TIGR01545 147 -----------------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGY 181 (210)
T ss_pred -----------------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEe
Confidence 001100 01122345677775554322123456788
Q ss_pred cCCCCChhhhhhcCeeEEecCcc
Q 001335 858 GDGANDVSMIQAAHIGVGISGQE 880 (1097)
Q Consensus 858 GDG~ND~~ml~~AdvGIam~g~e 880 (1097)
||+.||.|||+.||.+++++..+
T Consensus 182 sDS~~D~pmL~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 182 SDSKQDNPLLAFCEHRWRVSKRG 204 (210)
T ss_pred cCCcccHHHHHhCCCcEEECcch
Confidence 99999999999999999996543
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.017 Score=62.82 Aligned_cols=44 Identities=9% Similarity=0.245 Sum_probs=40.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNE 742 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~ 742 (1097)
+++||+++.++.|++.|+++.++||-....+..+.++.|+...+
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 57999999999999999999999999999999999999986544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0075 Score=66.06 Aligned_cols=42 Identities=17% Similarity=0.156 Sum_probs=38.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.+|++++++.|++.|+++.|+|+.....+..+-..+|+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 150 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG 150 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh
Confidence 578999999999999999999999999999999988888753
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0073 Score=64.71 Aligned_cols=43 Identities=16% Similarity=0.214 Sum_probs=38.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
-++.+++.++|+.|++.|+++.++||.....+..+.+..|+..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 133 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD 133 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh
Confidence 4688999999999999999999999999999999998888743
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.056 Score=68.74 Aligned_cols=38 Identities=11% Similarity=0.165 Sum_probs=31.6
Q ss_pred ccCCChHHHHHHH-HHcCCeEEEEcCCChhhHHHHHHHc
Q 001335 699 KLQEGVPACIETL-ARAGIKIWVLTGDKMETAINIAYAC 736 (1097)
Q Consensus 699 ~lr~~v~e~I~~L-~~aGIkv~mlTGD~~~ta~~ia~~~ 736 (1097)
.+-+++.+++++| ++.|+.|+++|||...+.......+
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 4556888999997 7779999999999999998876543
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.012 Score=62.58 Aligned_cols=110 Identities=9% Similarity=0.088 Sum_probs=74.8
Q ss_pred ccCCChHHHH-HHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 699 KLQEGVPACI-ETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 699 ~lr~~v~e~I-~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
.+.|++.++| +.+++.|++++++|+-...-+..++..+|+.. ...++....+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4589999999 57888999999999999999999999998632 1122211100
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEe
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 857 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlai 857 (1097)
...+|+- ..-.+..+.|..-++..-........+-
T Consensus 148 ----------------------~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY 182 (211)
T PRK11590 148 ----------------------RRYGGWV-----------------------LTLRCLGHEKVAQLERKIGTPLRLYSGY 182 (211)
T ss_pred ----------------------EEEccEE-----------------------CCccCCChHHHHHHHHHhCCCcceEEEe
Confidence 0111110 1122445677776654322133456788
Q ss_pred cCCCCChhhhhhcCeeEEecCcc
Q 001335 858 GDGANDVSMIQAAHIGVGISGQE 880 (1097)
Q Consensus 858 GDG~ND~~ml~~AdvGIam~g~e 880 (1097)
||+.||.|||+.|+-+++++...
T Consensus 183 ~Ds~~D~pmL~~a~~~~~vnp~~ 205 (211)
T PRK11590 183 SDSKQDNPLLYFCQHRWRVTPRG 205 (211)
T ss_pred cCCcccHHHHHhCCCCEEECccH
Confidence 99999999999999999996554
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.15 Score=57.75 Aligned_cols=202 Identities=15% Similarity=0.158 Sum_probs=104.8
Q ss_pred CceEEEEeeecc--ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccC---
Q 001335 687 DLTLIGCTAIED--KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEER--- 761 (1097)
Q Consensus 687 ~l~llG~~~ieD--~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~--- 761 (1097)
|.||+-++.-.| .+-+++.++|++|. .|++++++|||....+..+. ++ .....+..++.++......
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~---~l----~~l~l~g~hGa~i~~p~~~~~~ 190 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV---KL----AELYYAGSHGMDIKGPAKGFSR 190 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh---cc----cCceEEEcCCcEEecCCCccee
Confidence 667776665434 37788999999999 78999999999999998873 33 1234555555543321000
Q ss_pred ----CChHHHH-----HHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhcc------C
Q 001335 762 ----GDPVEIA-----RFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLN------C 826 (1097)
Q Consensus 762 ----~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~------~ 826 (1097)
....... ......+...+........ ...-..+.+++.+.-.........++..++...... .
T Consensus 191 ~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~p--Ga~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~ 268 (366)
T PLN03017 191 HKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTP--GAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLT 268 (366)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHhcCC--CCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEe
Confidence 0000000 0011112222222211111 111123344444332221111101222222221111 1
Q ss_pred CceEEEEeCc---ccHHHHHHHHHccc------CceEEEecCCCCChhhhhhc-----CeeEEecCccchhhhhhcceec
Q 001335 827 SSVVCCRVSP---LQKAQVTSLVKKGA------RKITLSIGDGANDVSMIQAA-----HIGVGISGQEGMQAVMASDFAI 892 (1097)
Q Consensus 827 ~~vi~~r~sP---~qK~~iv~~lk~~~------~~~vlaiGDG~ND~~ml~~A-----dvGIam~g~e~~~a~~~AD~vi 892 (1097)
...-..++.| -.|+..++.+.+.. ...++++||...|-.|++.. ++||.++...+ ...|+|.+
T Consensus 269 ~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L 345 (366)
T PLN03017 269 QGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSL 345 (366)
T ss_pred CCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeC
Confidence 1223345555 37999999887532 23689999999999999976 35555542222 24788988
Q ss_pred cchHhHHHH
Q 001335 893 AQFRFLTDL 901 (1097)
Q Consensus 893 ~~~~~l~~l 901 (1097)
.+-.-+..+
T Consensus 346 ~dp~eV~~f 354 (366)
T PLN03017 346 QDPSEVMDF 354 (366)
T ss_pred CCHHHHHHH
Confidence 876554443
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.013 Score=58.89 Aligned_cols=34 Identities=26% Similarity=0.298 Sum_probs=31.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHH
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAI 730 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~ 730 (1097)
+|.+.+++.+++++++++|++++++|||....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988874
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0023 Score=53.58 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=37.8
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccc
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTT 99 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~ 99 (1097)
+.++++||.|.++.++.+.+. +.+++||.+|+.++++++++++++
T Consensus 17 ~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 17 ARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 347889999999988744432 899999999999999999999875
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.0017 Score=55.30 Aligned_cols=42 Identities=21% Similarity=0.320 Sum_probs=35.5
Q ss_pred CCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhc
Q 001335 53 NQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILS 97 (1097)
Q Consensus 53 ~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~ 97 (1097)
.|+++||+|.++..+...+. +.|++||.+|+++++++++++|
T Consensus 28 ~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 28 ERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 47889999999776655543 8999999999999999999875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.021 Score=60.99 Aligned_cols=42 Identities=21% Similarity=0.214 Sum_probs=39.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.++.+|+++.++.|++.|+++.++||-....+..+.+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999998888875
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.027 Score=61.70 Aligned_cols=42 Identities=31% Similarity=0.198 Sum_probs=37.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.||+.++++.|+++|+++.++||.....+..+.+..|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 467999999999999999999999999999888888888753
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.037 Score=56.62 Aligned_cols=40 Identities=30% Similarity=0.238 Sum_probs=30.7
Q ss_pred CceEEEEeeecc----ccCCChHHHHHHHHHcCCeEEEEcCCCh
Q 001335 687 DLTLIGCTAIED----KLQEGVPACIETLARAGIKIWVLTGDKM 726 (1097)
Q Consensus 687 ~l~llG~~~ieD----~lr~~v~e~I~~L~~aGIkv~mlTGD~~ 726 (1097)
|.++.|-..+.+ ++.|+++++++.|++.|+++.++|+...
T Consensus 12 d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 12 DGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 555555544332 3689999999999999999999998753
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.028 Score=60.04 Aligned_cols=40 Identities=23% Similarity=0.222 Sum_probs=33.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 738 (1097)
++.||+.++++.|+++|+++.++|+.....+...-...++
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999877666555555565
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.037 Score=61.10 Aligned_cols=41 Identities=27% Similarity=0.152 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.||+.++|+.|++.|+++.++||.....+..+-+..++.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56899999999999999999999999988887777776654
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.03 Score=64.03 Aligned_cols=42 Identities=14% Similarity=0.160 Sum_probs=38.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.+|+.++++.|+++|+++.++|+.....+..+-+..||..
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~ 257 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG 257 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH
Confidence 478999999999999999999999999999999999988843
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.018 Score=61.68 Aligned_cols=41 Identities=17% Similarity=0.224 Sum_probs=35.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCC----hhhHHHHHHHcCC
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDK----METAINIAYACNL 738 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~----~~ta~~ia~~~gi 738 (1097)
-.+.+++++.++.|++.|+++.++||+. ..++.++.+..|+
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 3577889999999999999999999975 5588888887887
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.012 Score=62.94 Aligned_cols=41 Identities=20% Similarity=0.194 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC----ChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGD----KMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD----~~~ta~~ia~~~gi~ 739 (1097)
.+.+++++.++.++++|+++.++|++ ...++..+.+.+|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 34555999999999999999999999 667899999889984
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.053 Score=59.13 Aligned_cols=42 Identities=19% Similarity=0.102 Sum_probs=38.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.||+.++++.|++.|+++.++|+-....+....+..|+..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 149 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD 149 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 578999999999999999999999999999999998888853
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.054 Score=64.86 Aligned_cols=42 Identities=14% Similarity=0.114 Sum_probs=38.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.||+.++++.|++.|+++.++|+.....+..+.+.+|+..
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~ 371 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ 371 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh
Confidence 688999999999999999999999999999999998888743
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.055 Score=57.80 Aligned_cols=41 Identities=12% Similarity=0.136 Sum_probs=36.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|++.|++++++|+-....+......+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 57899999999999999999999999888888887877774
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.045 Score=53.15 Aligned_cols=41 Identities=20% Similarity=0.237 Sum_probs=35.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCC--------hhhHHHHHHHcCC
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDK--------METAINIAYACNL 738 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~--------~~ta~~ia~~~gi 738 (1097)
-++.+++.++++.|+++|+++.++|+.. ...+..+...+|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999988 6667777777776
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.057 Score=60.15 Aligned_cols=38 Identities=24% Similarity=0.283 Sum_probs=32.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 736 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 736 (1097)
++.||+.++++.|++.|+++.++|+-....+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998877776665544
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.045 Score=57.37 Aligned_cols=43 Identities=23% Similarity=0.165 Sum_probs=38.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.+++.++++++++.|++.|+++.++||.....+..+.+.+|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4557778899999999999999999999999999999999984
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.13 Score=52.67 Aligned_cols=58 Identities=26% Similarity=0.308 Sum_probs=42.1
Q ss_pred cHHHHHHHHHcc--cCceEEEecCCCCChhhhhhc----CeeEEecCccchhhhhhcceeccchHh
Q 001335 838 QKAQVTSLVKKG--ARKITLSIGDGANDVSMIQAA----HIGVGISGQEGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 838 qK~~iv~~lk~~--~~~~vlaiGDG~ND~~ml~~A----dvGIam~g~e~~~a~~~AD~vi~~~~~ 897 (1097)
.|+.+++.+.+. ...-.+.+||+..|+.||+++ ++.|+.+|++= |..-||+.+.....
T Consensus 191 ~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvisp~~ 254 (315)
T COG4030 191 EKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVISPTA 254 (315)
T ss_pred chhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEeccch
Confidence 455666555442 123378899999999999998 35677788887 78889998876554
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.061 Score=56.36 Aligned_cols=41 Identities=17% Similarity=0.239 Sum_probs=37.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|+++|+++.++|+-+...+..+.+.+|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 57899999999999999999999999888888888888873
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.071 Score=61.92 Aligned_cols=40 Identities=13% Similarity=0.071 Sum_probs=33.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHH-HcCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAY-ACNL 738 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~-~~gi 738 (1097)
++.+|+.++++.|++.|+++.|+|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998887766554 4565
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.16 Score=54.39 Aligned_cols=40 Identities=15% Similarity=0.074 Sum_probs=34.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+|+.++++.|+ +|+++.++|+.....+...-...|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 47899999999999 68999999998888777777777763
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.17 Score=52.19 Aligned_cols=51 Identities=18% Similarity=0.151 Sum_probs=34.7
Q ss_pred CceEEEecCCCCChhhhhhcCeeE-Ee-cCccch-hhhhhc--ceeccchHhHHHH
Q 001335 851 RKITLSIGDGANDVSMIQAAHIGV-GI-SGQEGM-QAVMAS--DFAIAQFRFLTDL 901 (1097)
Q Consensus 851 ~~~vlaiGDG~ND~~ml~~AdvGI-am-~g~e~~-~a~~~A--D~vi~~~~~l~~l 901 (1097)
.+.+++|||+.+|+.+-+.|++.+ ++ .|.... .....+ |+++.++.-+..+
T Consensus 120 ~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 120 LAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred hhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 467999999999999999999854 44 232211 112345 8888887766554
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.054 Score=60.96 Aligned_cols=44 Identities=20% Similarity=0.117 Sum_probs=40.8
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 696 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 696 ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
..+++.+++.++++.|++.|++++++||+....+..+.+.+++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 56789999999999999999999999999999999999888874
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.15 Score=54.72 Aligned_cols=41 Identities=20% Similarity=0.131 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+|+.++++.|+++|+++.++|+-....+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 67899999999999999999999998888877777777764
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.16 Score=51.70 Aligned_cols=53 Identities=21% Similarity=0.160 Sum_probs=44.2
Q ss_pred CceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCC-ChhhHHHHHHHcCCc
Q 001335 687 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGD-KMETAINIAYACNLI 739 (1097)
Q Consensus 687 ~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD-~~~ta~~ia~~~gi~ 739 (1097)
+.......+-+-++.+|+.++++.|+++|+++.++|+- ....+..+....|+.
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 34456666667789999999999999999999999976 888888888888874
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.066 Score=54.33 Aligned_cols=44 Identities=18% Similarity=0.170 Sum_probs=40.4
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 696 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 696 ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
-..++.+++.+.++.|++.|++++++|+.....+....+.+|+.
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 34688999999999999999999999999999999999999886
|
... |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.18 Score=50.06 Aligned_cols=108 Identities=17% Similarity=0.159 Sum_probs=69.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCC-CeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNE-MKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~-~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
+++|+-++.++.+++.+|+++++||-...-...+-...+ .++ -..+.+..++
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~iv--gke~i~~idi~sn~------------------------- 125 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIV--GKERIYCIDIVSNN------------------------- 125 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhc--cccceeeeEEeecC-------------------------
Confidence 689999999999999999999999987766666655443 111 0111222221
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeC--cccHHHHHHHHHcccCceEE
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVS--PLQKAQVTSLVKKGARKITL 855 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~s--P~qK~~iv~~lk~~~~~~vl 855 (1097)
..+.++|.-. ++.-.-+ -.+|...|+.+++ +.+.+.
T Consensus 126 --------------------~~ih~dg~h~---------------------i~~~~ds~fG~dK~~vI~~l~e-~~e~~f 163 (220)
T COG4359 126 --------------------DYIHIDGQHS---------------------IKYTDDSQFGHDKSSVIHELSE-PNESIF 163 (220)
T ss_pred --------------------ceEcCCCcee---------------------eecCCccccCCCcchhHHHhhc-CCceEE
Confidence 1122222210 0111111 3469999999998 778899
Q ss_pred EecCCCCChhhhhhcCeeEE
Q 001335 856 SIGDGANDVSMIQAAHIGVG 875 (1097)
Q Consensus 856 aiGDG~ND~~ml~~AdvGIa 875 (1097)
+||||+.|+++-+.+|+=.|
T Consensus 164 y~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 164 YCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred EecCCcccccHhhhhhhHhh
Confidence 99999999988776665443
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.24 Score=50.67 Aligned_cols=50 Identities=12% Similarity=0.161 Sum_probs=39.0
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccch
Q 001335 703 GVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIR 756 (1097)
Q Consensus 703 ~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~ 756 (1097)
.+.+.+.+|+++|+.|+.+|.-........-+++|+-. ...|..++..++
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~----~p~iaEnG~aI~ 76 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG----LPLIAENGAAIY 76 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC----CceeecCCceEE
Confidence 46789999999999999999999888888889988742 344555554443
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.13 Score=55.04 Aligned_cols=31 Identities=26% Similarity=0.339 Sum_probs=27.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETA 729 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta 729 (1097)
++.+|+.++|+.|++.|+++.++||-.....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 5789999999999999999999998765543
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.16 Score=52.22 Aligned_cols=40 Identities=25% Similarity=0.262 Sum_probs=33.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|+++|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 678999999999999999999999988777 5554456763
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.70 E-value=3.3 Score=47.01 Aligned_cols=67 Identities=12% Similarity=0.245 Sum_probs=44.9
Q ss_pred EEeCc---ccHHHHHHHHHcccC------ceEEEecCCCCChhhhhhc-----CeeEEecCccchhhhhhcceeccchHh
Q 001335 832 CRVSP---LQKAQVTSLVKKGAR------KITLSIGDGANDVSMIQAA-----HIGVGISGQEGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 832 ~r~sP---~qK~~iv~~lk~~~~------~~vlaiGDG~ND~~ml~~A-----dvGIam~g~e~~~a~~~AD~vi~~~~~ 897 (1097)
.++.| -.|+..++.+.+..+ ..++++||-..|-.|++.. ++||-++.... ...|+|.+.+-.-
T Consensus 260 vEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k---~T~A~y~L~dp~e 336 (354)
T PLN02151 260 LEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK---ETNASYSLQEPDE 336 (354)
T ss_pred EEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC---CCcceEeCCCHHH
Confidence 34445 379999998875322 2489999999999999864 55555531111 2368999988665
Q ss_pred HHHH
Q 001335 898 LTDL 901 (1097)
Q Consensus 898 l~~l 901 (1097)
+..+
T Consensus 337 V~~~ 340 (354)
T PLN02151 337 VMEF 340 (354)
T ss_pred HHHH
Confidence 5444
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.11 Score=53.54 Aligned_cols=40 Identities=23% Similarity=0.308 Sum_probs=31.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.++.||+.++|+.|+++|+++.++|+... +....+.+|+.
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 36789999999999999999999997532 34556666653
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=93.42 E-value=0.27 Score=52.41 Aligned_cols=41 Identities=20% Similarity=0.296 Sum_probs=36.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.+++.++++.|++. +++.++|+-....+..+.+..|+..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~ 137 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFP 137 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHh
Confidence 6789999999999999 9999999998888888888888743
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.40 E-value=0.33 Score=52.97 Aligned_cols=42 Identities=12% Similarity=0.163 Sum_probs=32.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHH---HHHHHcCC
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAI---NIAYACNL 738 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~---~ia~~~gi 738 (1097)
..++-+|+.+.++.|++.|+++.++|++...... ...+..|+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi 160 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGF 160 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCc
Confidence 3467899999999999999999999999854433 33445565
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.12 Score=53.30 Aligned_cols=40 Identities=18% Similarity=0.257 Sum_probs=33.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
-++.+|+.++++.|++.|+++.++|+. ..+..+.+..|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 368999999999999999999999987 5566666777763
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.31 Score=49.14 Aligned_cols=26 Identities=27% Similarity=0.505 Sum_probs=23.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGD 724 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD 724 (1097)
++-+++.++++.|+++|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46799999999999999999999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.37 E-value=0.17 Score=50.31 Aligned_cols=43 Identities=14% Similarity=0.022 Sum_probs=37.6
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 696 IEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 696 ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
..-+++||+.+.++.|+ .++++.+.|+-....+..+.+.+++.
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34468999999999999 57999999999999999998888763
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.4 Score=48.89 Aligned_cols=41 Identities=20% Similarity=0.292 Sum_probs=33.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCC-hhhHHHHHHHcCC
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDK-METAINIAYACNL 738 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~-~~ta~~ia~~~gi 738 (1097)
.++.++++++++.|++.|+++.++|+.. ...+..+.+.+|+
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3578999999999999999999999987 5556666666665
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=92.13 E-value=0.7 Score=49.35 Aligned_cols=42 Identities=12% Similarity=0.185 Sum_probs=37.1
Q ss_pred ccCCChHHHHHHH--HHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETL--ARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L--~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
|+.++.+++++.+ ++.|+.+.|+|--+..-...+-+.-|+..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 6789999999999 45899999999999999999988888853
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.67 Score=47.51 Aligned_cols=48 Identities=21% Similarity=0.230 Sum_probs=32.9
Q ss_pred CceEEEecCCCCChhhhhhcCee--EEe-cCccchh-hhhhcceeccchHhH
Q 001335 851 RKITLSIGDGANDVSMIQAAHIG--VGI-SGQEGMQ-AVMASDFAIAQFRFL 898 (1097)
Q Consensus 851 ~~~vlaiGDG~ND~~ml~~AdvG--Iam-~g~e~~~-a~~~AD~vi~~~~~l 898 (1097)
...++||||...|+.+=+.|++. |++ .|..... ....+|+++.++.-|
T Consensus 123 ~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 123 MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 35688999999999999999995 344 3432111 223589988776543
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=91.94 E-value=0.44 Score=50.04 Aligned_cols=39 Identities=13% Similarity=0.118 Sum_probs=31.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 738 (1097)
++.+++.++++.|+++|+++.++|+-.. .+......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCc
Confidence 6789999999999999999999998654 34555566665
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=91.93 E-value=0.34 Score=48.34 Aligned_cols=40 Identities=18% Similarity=0.310 Sum_probs=34.0
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 736 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 736 (1097)
+.+..+|+.++++.|++.|+++.++|+.....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4455689999999999999999999999988888776654
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=91.79 E-value=0.34 Score=48.04 Aligned_cols=27 Identities=30% Similarity=0.439 Sum_probs=25.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDK 725 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~ 725 (1097)
++.+++.++++.|++.|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999865
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.61 E-value=0.65 Score=49.30 Aligned_cols=31 Identities=23% Similarity=0.234 Sum_probs=27.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMET 728 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 728 (1097)
-+.-+++.++++.|++.|++|+++|||....
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 3678999999999999999999999998655
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=91.50 E-value=0.26 Score=47.56 Aligned_cols=39 Identities=10% Similarity=0.109 Sum_probs=33.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC-ChhhHHHHHHHcC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGD-KMETAINIAYACN 737 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD-~~~ta~~ia~~~g 737 (1097)
++.+++.++++.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 6766666655544
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.06 E-value=0.96 Score=51.55 Aligned_cols=27 Identities=26% Similarity=0.402 Sum_probs=24.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCC
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGD 724 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD 724 (1097)
-++.|++.++++.|+++|+++.|+|+-
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 367899999999999999999999983
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=88.86 E-value=2 Score=46.29 Aligned_cols=69 Identities=17% Similarity=0.223 Sum_probs=33.8
Q ss_pred CCceEEEEeCcccHHHHHHHHHcccC------ceEEEecCCCCChhhhhhc------CeeEEecCccchhhhhhcceecc
Q 001335 826 CSSVVCCRVSPLQKAQVTSLVKKGAR------KITLSIGDGANDVSMIQAA------HIGVGISGQEGMQAVMASDFAIA 893 (1097)
Q Consensus 826 ~~~vi~~r~sP~qK~~iv~~lk~~~~------~~vlaiGDG~ND~~ml~~A------dvGIam~g~e~~~a~~~AD~vi~ 893 (1097)
-+.+|-.|-.-..|+..++.+-+..+ ..++++||...|-.|++.. ++||-+...+......+|+|-+.
T Consensus 153 g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 153 GKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp -SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred CCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 34456666555569999998776433 3799999999999999885 45665544332223456666554
Q ss_pred c
Q 001335 894 Q 894 (1097)
Q Consensus 894 ~ 894 (1097)
+
T Consensus 233 ~ 233 (235)
T PF02358_consen 233 D 233 (235)
T ss_dssp -
T ss_pred c
Confidence 4
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.69 E-value=3.2 Score=42.93 Aligned_cols=40 Identities=15% Similarity=0.208 Sum_probs=34.3
Q ss_pred ccCCChHHHHHHHHHcCC-eEEEEcCCChhhHHHHHHHcCC
Q 001335 699 KLQEGVPACIETLARAGI-KIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGI-kv~mlTGD~~~ta~~ia~~~gi 738 (1097)
|+-|+..++|+.+++.|- .+.|+|--|.--...+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 677999999999999997 8999998888777777777776
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=87.63 E-value=1.8 Score=57.20 Aligned_cols=41 Identities=17% Similarity=0.017 Sum_probs=37.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.+.+|+.+.++.|+++|+++.++|+-....+..+.+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 46799999999999999999999999999888888888874
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=87.41 E-value=1.1 Score=50.98 Aligned_cols=37 Identities=16% Similarity=0.227 Sum_probs=33.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 735 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 735 (1097)
++.++++++|+.|+++|+++.++|.-+...|..+.+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 4568999999999999999999999999999888776
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.91 E-value=1 Score=47.94 Aligned_cols=39 Identities=10% Similarity=0.160 Sum_probs=31.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
-++.+|++++++.| ++++.++|+.....+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 35678999999998 4999999998887777776777764
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=86.55 E-value=0.91 Score=47.97 Aligned_cols=29 Identities=31% Similarity=0.340 Sum_probs=25.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChh
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKME 727 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ 727 (1097)
++.+++.++++.|+++|+++.++|+....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 57899999999999999999999986543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=86.36 E-value=2.2 Score=45.34 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=32.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 735 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 735 (1097)
+-++.+|+.++++.|+++|+++.++|.........+...
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 457899999999999999999999999877666555443
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=86.00 E-value=2.6 Score=42.66 Aligned_cols=27 Identities=30% Similarity=0.434 Sum_probs=23.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCCh
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKM 726 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~ 726 (1097)
+-+|+.++++.|+++|+++.++|....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999997543
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=85.82 E-value=3 Score=41.46 Aligned_cols=34 Identities=26% Similarity=0.291 Sum_probs=30.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAIN 731 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ 731 (1097)
|..++++.+..+++++.|.+++-+|+|..--|..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~ 59 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANR 59 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHH
Confidence 7999999999999999999999999998655544
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.66 E-value=2.6 Score=41.77 Aligned_cols=40 Identities=23% Similarity=0.277 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 738 (1097)
+.-|++.+-+++++++|+++.++|.-+...+...+..+|+
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 4567888899999999999999999999999999998887
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=85.56 E-value=2.9 Score=45.32 Aligned_cols=48 Identities=6% Similarity=0.099 Sum_probs=36.7
Q ss_pred EEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHH--HHHHHcCCc
Q 001335 692 GCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAI--NIAYACNLI 739 (1097)
Q Consensus 692 G~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~--~ia~~~gi~ 739 (1097)
|.+.-.+++-|+++++++.|+++|+++.++|.-....+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 455556778999999999999999999999995544333 455667763
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.43 E-value=2.3 Score=44.47 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=26.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMET 728 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 728 (1097)
++.+++.++++.|+++|+++.++|.-....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 478999999999999999999999976544
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=85.17 E-value=5.4 Score=47.83 Aligned_cols=93 Identities=13% Similarity=0.123 Sum_probs=56.2
Q ss_pred cccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhHHHHHHhhhhhhHHHHhH
Q 001335 836 PLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICK 915 (1097)
Q Consensus 836 P~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l~~lll~~Gr~~~~~i~~ 915 (1097)
-++|..-++.... ......+.||+.||.+||+.||-++.+..... + .+..+++.+.+++-.||..++=.-.
T Consensus 174 Ge~Kv~rl~~~~g-~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~-~-------~~~~~~~~~~~~fhdgrl~~~p~~~ 244 (497)
T PLN02177 174 GDHKRDAVLKEFG-DALPDLGLGDRETDHDFMSICKEGYMVPRTKC-E-------PLPRNKLLSPVIFHEGRLVQRPTPL 244 (497)
T ss_pred cHHHHHHHHHHhC-CCCceEEEECCccHHHHHHhCCccEEeCCCCC-C-------cCCcccCCCceeeeCCcccCCCCHH
Confidence 3457666653321 11223789999999999999999999954221 0 1556677777766669988765544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 001335 916 VVLYFFYKNLTFTLTQFWFTFQT 938 (1097)
Q Consensus 916 ~i~~~~~~ni~~~~~~~~~~~~~ 938 (1097)
..+..+.. +-+++++.+.-++.
T Consensus 245 ~~l~~~~~-~p~g~~l~~~r~~~ 266 (497)
T PLN02177 245 VALLTFLW-MPIGFILSLLRVYL 266 (497)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHH
Confidence 44443333 24444444444443
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.32 E-value=21 Score=38.97 Aligned_cols=75 Identities=20% Similarity=0.166 Sum_probs=48.6
Q ss_pred CCceEEEEeCcccHHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCe----eEEecCccchhhhhhcceeccchHhH
Q 001335 826 CSSVVCCRVSPLQKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHI----GVGISGQEGMQAVMASDFAIAQFRFL 898 (1097)
Q Consensus 826 ~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~Adv----GIam~g~e~~~a~~~AD~vi~~~~~l 898 (1097)
-+.+|-+|-+-.-|+..++.+.+... ..++..||...|-.|++..+= +|-+ +....+|+-.++.+-...+.+
T Consensus 170 gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v-~~~~t~a~~~~~~~~~~~~~l 248 (266)
T COG1877 170 GKMVVELRPPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKV-GVGSTQAKFRLAGVYGFLRSL 248 (266)
T ss_pred CceEEEEeeCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEe-cCCcccccccccccHHHHHHH
Confidence 45678888887789999997765432 358888999999999999872 3333 222233444444444444444
Q ss_pred HHH
Q 001335 899 TDL 901 (1097)
Q Consensus 899 ~~l 901 (1097)
..+
T Consensus 249 ~~~ 251 (266)
T COG1877 249 YKL 251 (266)
T ss_pred HHH
Confidence 444
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=80.43 E-value=1.8 Score=39.80 Aligned_cols=48 Identities=15% Similarity=0.162 Sum_probs=35.8
Q ss_pred EEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHH---HHcCCc
Q 001335 692 GCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIA---YACNLI 739 (1097)
Q Consensus 692 G~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia---~~~gi~ 739 (1097)
|.+--.+++=|+++++|+.|+++|++++++|.....+...++ +.+|+-
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 455567888999999999999999999999998766654444 556663
|
... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1097 | ||||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 9e-08 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-06 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-06 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 8e-06 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 9e-06 |
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1097 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 6e-34 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-32 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-29 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 6e-18 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 2e-17 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 3e-14 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-08 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 5e-06 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 1e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 2e-05 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 3e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 3e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 4e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 5e-05 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-04 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 4e-04 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 6e-04 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 7e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 6e-34
Identities = 103/481 (21%), Positives = 150/481 (31%), Gaps = 125/481 (25%)
Query: 416 EELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSV 475
E LG I SDKTGTLT+N M I+ TE
Sbjct: 375 ETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTE-------------------- 414
Query: 476 KAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAIC-HTVLPEGDESPERITYQAA- 533
+ G FD + + + R L +C G ++
Sbjct: 415 ---DQSGQTFD------------QSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIG 459
Query: 534 SPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQS 593
E AL+ ++ + + + + + FNST K Q
Sbjct: 460 DASETALLKFSELTLG---------------NAMGYRE----RFPKVCEIPFNSTNKFQL 500
Query: 594 VVCRY---ADGRLVLYCKGADSVIYER----LANG-----NEDLKKVTREHLEQFGSSGL 641
+ D R VL KGA + ER L G +E ++ + G G
Sbjct: 501 SIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGE 560
Query: 642 RTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQ 701
R L LS Y E L+ G ++ D +
Sbjct: 561 RVLGFCQLYLSEKDYPPGYA--------------FDVEAMNFPTSGLSFAGLVSMIDPPR 606
Query: 702 EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEER 761
VP + AGI++ ++TGD TA IA + II+ + + D+ R
Sbjct: 607 ATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVG---------IISEGSETVEDIAAR 657
Query: 762 GDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPS-LRVILL 820
R ++ I+G +L +DPS L L
Sbjct: 658 --------------LRVPVDQVNRKDARACVINGMQLK----------DMDPSELVEALR 693
Query: 821 NLSLNCSSVVCCRVSPLQKAQ-VTSLVKKGARKITLSIGDGANDVSMIQAAHIGV--GIS 877
+V R SP QK V S + G I GDG ND ++ A IGV GI+
Sbjct: 694 TH----PEMVFARTSPQQKLVIVESCQRLG--AIVAVTGDGVNDSPALKKADIGVAMGIA 747
Query: 878 G 878
G
Sbjct: 748 G 748
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 1e-32
Identities = 108/480 (22%), Positives = 154/480 (32%), Gaps = 123/480 (25%)
Query: 416 EELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSV 475
E LG I SDKTGTLT+N M +I+ TE + G
Sbjct: 370 ETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSG---------------- 413
Query: 476 KAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAIC-HTVLPEGDESPERITYQAA- 533
F+ R A+C V G ++ + A
Sbjct: 414 -----AAFDKTSATW--------------SALSRIAALCNRAVFQAGQDNVPILKRSVAG 454
Query: 534 SPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQS 593
E+AL+ + V+ M + + FNST K Q
Sbjct: 455 DASESALLKCIELCCG---------------SVQGMRD----RNPKIVEIPFNSTNKYQL 495
Query: 594 VVCRY---ADGRLVLYCKGADSVIYER----LANG-----NEDLKKVTREHLEQFGSSGL 641
+ ++ R +L KGA I +R L NG ED+K+ + + G G
Sbjct: 496 SIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGE 555
Query: 642 RTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQ 701
R L + L D Y + + DL +G A+ D +
Sbjct: 556 RVLGFCHFALPEDKYN--------------EGYPFDADEPNFPTTDLCFVGLMAMIDPPR 601
Query: 702 EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEER 761
VP + AGIK+ ++TGD TA IA II+ I D+ R
Sbjct: 602 AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG---------IISEGNETIEDIAAR 652
Query: 762 GDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLN 821
+ R+ A ++ G L L IL
Sbjct: 653 LNIPIGQVNPRDAK-----------------------ACVVHGSDLKDLSTEVLDDILHY 689
Query: 822 LSLNCSSVVCCRVSPLQKAQ-VTSLVKKGARKITLSIGDGANDVSMIQAAHIGV--GISG 878
+ +V R SP QK V ++G I GDG ND ++ A IGV GISG
Sbjct: 690 H----TEIVFARTSPQQKLIIVEGCQRQG--AIVAVTGDGVNDSPALKKADIGVAMGISG 743
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 2e-29
Identities = 99/479 (20%), Positives = 146/479 (30%), Gaps = 120/479 (25%)
Query: 416 EELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSV 475
E LG I SDKTGTLT N M K I ++ G + E + TG
Sbjct: 341 ETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSI---TG---------- 387
Query: 476 KAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAIC-HTVLPEGDESPERITYQAA- 533
+ + L D E A+C + L D + + Y+
Sbjct: 388 -----STYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSL---DFNETKGVYEKVG 439
Query: 534 SPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQS 593
E AL T + F R + + + + LEF+ RK S
Sbjct: 440 EATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQL---MKKEFTLEFSRDRKSMS 496
Query: 594 VVCRYADGRL-----VLYCKGA-DSVI----YERLANGNEDLKKVTREHLEQ------FG 637
V C A ++ KGA + VI Y R+ + +E + G
Sbjct: 497 VYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG 556
Query: 638 SSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIE 697
LR L LA RD P E + E DLT +G +
Sbjct: 557 RDTLRCLALATRDTPPKREEMVLDD---------------SSRFMEYETDLTFVGVVGML 601
Query: 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRD 757
D ++ V I+ AGI++ ++TGD TAI I
Sbjct: 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC------------------------ 637
Query: 758 VEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPS-LR 816
R + + + + +G + L + R
Sbjct: 638 -------------------RRIGIFGENEEVADRAYTGREFD----------DLPLAEQR 668
Query: 817 VILLNLSLNCSSVVCCRVSPLQKAQ-VTSLVKKGARKITLSIGDGANDVSMIQAAHIGV 874
RV P K++ V L +IT GDG ND ++ A IG+
Sbjct: 669 EACRRAC------CFARVEPSHKSKIVEYLQSYD--EITAMTGDGVNDAPALKKAEIGI 719
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 6e-18
Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 27/191 (14%)
Query: 577 YEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQF 636
++ L FN KR ++ G KGA I E N+ KKV ++++
Sbjct: 392 IREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKV-LSIIDKY 450
Query: 637 GSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAI 696
GLR+L +A + + ++ E +G +
Sbjct: 451 AERGLRSLAVARQVVP-------------------------EKTKESPGAPWEFVGLLPL 485
Query: 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK-QFIITSETNAI 755
D + I G+ + ++TGD++ + N ++ + +A
Sbjct: 486 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDAN 545
Query: 756 RDVEERGDPVE 766
+ +E
Sbjct: 546 LASIPVEELIE 556
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 2e-17
Identities = 49/321 (15%), Positives = 93/321 (28%), Gaps = 101/321 (31%)
Query: 564 SHVEKMGKMQDVC--YEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANG 621
++ + + V Y++L F+ K+ V G + KGA + + +
Sbjct: 428 KSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEED 487
Query: 622 ---NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLD 678
E++ + + + +F + G R+L +A +
Sbjct: 488 HPIPEEVDQAYKNKVAEFATRGFRSLGVARKR---------------------------- 519
Query: 679 EVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738
E ++G D + + G+ I +LTGD + A + L
Sbjct: 520 -----GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL 574
Query: 739 INNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKL 798
N I +E + + E+ ++ A
Sbjct: 575 GTN-----IYNAERLGLGGGGDMPG-------------SEVYDFVEAA------------ 604
Query: 799 ALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQ-VTSLVKKGARKITLSI 857
DG +A V P K V L ++G +
Sbjct: 605 ----DG----FA----------------------EVFPQHKYNVVEILQQRG--YLVAMT 632
Query: 858 GDGANDVSMIQAAHIGVGISG 878
GDG ND ++ A G+ + G
Sbjct: 633 GDGVNDAPSLKKADTGIAVEG 653
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 3e-14
Identities = 26/123 (21%), Positives = 38/123 (30%), Gaps = 31/123 (25%)
Query: 585 FNSTRKRQSVVCRYADGRLVLYCKGADSVIYER----LANG-----NEDLKKVTREHLEQ 635
F+ R+R SVV L CKGA I NG ++ + + + +
Sbjct: 64 FDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDT 123
Query: 636 FGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTA 695
GLR + +A + L + E DL L G A
Sbjct: 124 LNRQGLRVVAVATKYLPAR----------------------EGDYQRADESDLILEGYIA 161
Query: 696 IED 698
D
Sbjct: 162 FLD 164
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 73.0 bits (178), Expect = 4e-13
Identities = 83/721 (11%), Positives = 182/721 (25%), Gaps = 243/721 (33%)
Query: 158 KLQVGDIVMVKQDGFFPADLLFLASTNADGVCY-IETANLDGETNLKIRKALERTWDYLT 216
+ Q DI+ V +D F + D C ++ D ++ ++ ++
Sbjct: 15 QYQYKDILSVFEDAFV-DNF--------D--CKDVQ----DMPKSILSKEEIDHIIMSKD 59
Query: 217 PEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIF 276
+ + + F ++ ++P + R S+ YI
Sbjct: 60 AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI------ 113
Query: 277 AGHETKVMMNSMNIPSKRS-TLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLG 335
+ + N + +K + + + KL AL + +
Sbjct: 114 --EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLE-----------------LRPAKNVL 154
Query: 336 LHNM---GNSV------EDDQFNPDKRFLVFVLNMFTLITLYSPIIPI-SLYVSIETIKF 385
+ + G + + F +F LN+ + + + + L I+
Sbjct: 155 IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID---- 210
Query: 386 FQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLM-------- 437
+ + S+ ++ + ++ ++ + K L+
Sbjct: 211 -----------PNWTSRSDHSSNIK-LRIHSIQAELRRLLKSKP--YENCLLVLLNVQNA 256
Query: 438 ----EF-FKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLR 492
F C I +T + V H
Sbjct: 257 KAWNAFNLSCKIL-------LTTRFKQVTDFLSAATTTHISLDH--HSMTLT-------- 299
Query: 493 GAWRNEHNPDACKEFF-RCLAICHTVLPEGDESPERITYQAA--SPDEAALVTAAKNFGF 549
PD K + L LP + +P +++
Sbjct: 300 --------PDEVKSLLLKYLDCRPQDLPR----------EVLTTNPRRLSIIAE------ 335
Query: 550 FFYRRTPTMI-YVRESHVEKMGKMQDVCYEILN-----------------------VLEF 585
R + + +K+ + + +L +L
Sbjct: 336 -SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL 394
Query: 586 --------------NSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTRE 631
N K V + + + + IY L E+ + R
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP----S--IYLELKVKLENEYALHRS 448
Query: 632 HLEQFGSSGLRTLCLAYRDLSP---DMY---------------ERWNE--------KFIQ 665
++ + + +T DL P D Y ER +F++
Sbjct: 449 IVDHY--NIPKTFD--SDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE 504
Query: 666 AKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDK 725
K + +I + LQ+ +K + K
Sbjct: 505 QK---------------IRHDSTAWNASGSILNTLQQ-------------LKFY-----K 531
Query: 726 METAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIA-----RFMREEVKRELN 780
N L+N + F+ E N I + D + IA + EE +++
Sbjct: 532 PYICDNDPKYERLVN-AILDFLPKIEENLICS--KYTDLLRIALMAEDEAIFEEAHKQVQ 588
Query: 781 K 781
+
Sbjct: 589 R 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 2e-09
Identities = 74/527 (14%), Positives = 154/527 (29%), Gaps = 182/527 (34%)
Query: 413 NLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVE 472
+++ E G+ +Y + D ++ F C + ++ + + + E++
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCK--------DVQDMPKSI-----LSKEEID 52
Query: 473 RSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQA 532
+ + LR F L E + +
Sbjct: 53 HIIMSKDA------VSGTLR--------------LFWTL----------LSKQEEMVQKF 82
Query: 533 ASPDEAALVTAAKNFGFFFYR-----RTPTMIYVR-ESHVEKMGKMQDVCYEILNVLEFN 586
E L N+ F R P+M+ +++ V + NV
Sbjct: 83 V---EEVL---RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV-FAKYNV---- 131
Query: 587 STRKRQSVVCRYA------DGRLVLY---------------------CKGADSVIYERLA 619
+R + + R A +++ CK + + L
Sbjct: 132 -SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190
Query: 620 NGNEDLKKVTREHLEQFGSSGLRTLCL-------AYRDLSPDMYERWNEKFIQAKSSLRD 672
N N LE L+ L + D S ++ R + + + L+
Sbjct: 191 NCNSP-----ETVLEM-----LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 673 REQK-----LDEV--AELIEK-DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGD 724
+ + L V A+ + + C KI + T
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFN---LSC-----------------------KILLTTRF 274
Query: 725 KMET-AINIAYACNLINNEMKQFIITSETNAI----RDVEERGDPVE-----------IA 768
K T ++ A ++ + + E ++ D + P E IA
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334
Query: 769 RFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPS-LRVILLNLSL--- 824
+R+ + + H ++ +KL II+ L L+P+ R + LS+
Sbjct: 335 ESIRDGLAT--------WDNWKH-VNCDKLTTIIE-SSLN-VLEPAEYRKMFDRLSVFPP 383
Query: 825 --NCSSVVCCRV----------SPLQKAQVTSLVKKGARKITLSIGD 859
+ +++ + + K SLV+K ++ T+SI
Sbjct: 384 SAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS 430
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 2e-08
Identities = 70/560 (12%), Positives = 153/560 (27%), Gaps = 179/560 (31%)
Query: 565 HVE-KMGKMQDVCYEILNVLE--FNSTRKRQSVVCRYADG--RLVLYCKGADSVIYER-- 617
H++ + G+ Q +IL+V E F + C+ + +L + D +I +
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAF-----VDNFDCKDVQDMPKSILSKEEIDHIIMSKDA 60
Query: 618 -----------LANGNEDLKKVTREHLEQ---FGSSGLRTLCLAYRDLSPDMYER----- 658
L+ E ++K E L F S ++T + MY
Sbjct: 61 VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ-PSMMTRMYIEQRDRL 119
Query: 659 WNEKFIQAKSSLRDREQKLDEVAELI-----EKDLTLIG-------CTAIEDKLQEGVPA 706
+N+ + AK ++ R Q ++ + + K++ + G A++
Sbjct: 120 YNDNQVFAKYNVS-RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD--------V 170
Query: 707 C--IETLARAGIKI-WVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGD 763
C + + KI W +N+ CN ++ + + R D
Sbjct: 171 CLSYKVQCKMDFKIFW----------LNLKN-CNSPETVLEM-LQKLLYQIDPNWTSRSD 218
Query: 764 PVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLS 823
+ ++ EL + + + Y + + L++ + +
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKS-KPYENCL------LVLLNVQ-----NAK---AWNAFN 263
Query: 824 LNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGM- 882
L+C ++ R QVT + +S+ H + ++ E
Sbjct: 264 LSCKILLTTR-----FKQVTDFLSAATTT----------HISLD---HHSMTLTPDEVKS 305
Query: 883 ---------------QAVMASDFAIAQF-RFLTDLLLVHGRWSYLRICKVVLYFFYKNLT 926
+ + + ++ + D L W + + LT
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL---ATWDNWK------HVNCDKLT 356
Query: 927 FTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQ 986
+ ++ +D L +F P
Sbjct: 357 TIIESS-LNVLEPAEYRKMFDR-----------------LSVFPPSA------HIPT--- 389
Query: 987 EGIKNVFFTWRVVAI-WAFFSVYQS-LVLYNCVTTSSATGQNSSGKIFGIWDVSTMAFTC 1044
++++ W +V+ S Q I I +
Sbjct: 390 ----------ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI-SIPSIY------ 432
Query: 1045 VVVTVNLRLLMMCNTITRFH 1064
L L + H
Sbjct: 433 ------LELKVKLENEYALH 446
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 4e-08
Identities = 92/594 (15%), Positives = 159/594 (26%), Gaps = 221/594 (37%)
Query: 34 RVQPQAPNFRT---IYCNDREANQPLRFKGNSIATTKYNV-----LTFLPKGLFEQFRRV 85
+ + + P+ T I DR N F KYNV L + L E
Sbjct: 99 KTEQRQPSMMTRMYIEQRDRLYNDNQVF-------AKYNVSRLQPYLKLRQALLE----- 146
Query: 86 ANCYFLMISILSTTPMSPVNPVTNVVPL---------SLVLLVSL---IKEAWED---WK 130
+ P NV+ + + L V L ++ + W
Sbjct: 147 ------------------LRPAKNVL-IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL 187
Query: 131 RFQNDMTINSTPVEVLQ------GQRWVSIP-----------WRKLQVGDIVMVKQDGFF 173
+N + + +E+LQ W S + ++ ++ K +
Sbjct: 188 NLKNCNSPETV-LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP---Y 243
Query: 174 PADLLFLASTNADGVCYIETANLDGETNLKIR-KALERT-----WDYLTPEKASEFKGEV 227
LL L V + N + K L T D+L+ + +
Sbjct: 244 ENCLLVL-----LNVQNAKAWNA-----FNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293
Query: 228 QCE--QPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM 285
P+ L + Q LP R S+ I I G T
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI------IAESIRDGLATWDNW 347
Query: 286 NSMNIPSKRSTLERKLDKL----------ILALFA-----TLTVMCLI------------ 318
+N + +E L+ L L++F ++ LI
Sbjct: 348 KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV 407
Query: 319 ---CAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTL----ITLYSP- 370
S + K + + ++ V + N + L + Y+
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPSI-------YL----ELKVKLENEYALHRSIVDHYNIP 456
Query: 371 -------IIPISL--YVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQV 421
+IP L Y F+ +I +H + E +
Sbjct: 457 KTFDSDDLIPPYLDQY-------FY---SHI-----GHH--------LKNIEHPERMTLF 493
Query: 422 EYIFSD------K----------TGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTG 465
+F D K +G++ L + + Y I + +
Sbjct: 494 RMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL-------KFYKPYICDND-------- 538
Query: 466 MKIPEVERSVKAV-------HEKGFNFDDPRLLRGAWRNEHNP---DACKEFFR 509
P+ ER V A+ E LLR A E +A K+ R
Sbjct: 539 ---PKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 5e-06
Identities = 26/209 (12%), Positives = 55/209 (26%), Gaps = 28/209 (13%)
Query: 708 IETLARAGIKIWVLTGDKMETAIN--------IAYACNLINNEMKQFIITSETNAIRDVE 759
+E L G+ + +T K + I + + V
Sbjct: 25 LERLRALGVPVVPVTA-KTRKEVEALGLEPPFIVENGGGLYLPRDWPVRAGRPKGGYRVV 83
Query: 760 ERGDPVEIARFMREEVKRELNKCI-------DEAQQYIHSISGEKLALIIDGKCLMYALD 812
P R E + + I EA + +S E + +
Sbjct: 84 SLAWPYRKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETLVL 143
Query: 813 PSLRVILLNLSLNCSSVVCCRVSPL-------QKAQ-----VTSLVKKGARKITLSIGDG 860
V + +L + K + + + +GD
Sbjct: 144 CPEEVEAVLEALEAVGLEWTHGGRFYHAAKGADKGRAVARLRALWPDPEEARFAVGLGDS 203
Query: 861 ANDVSMIQAAHIGVGISGQEGMQAVMASD 889
ND+ + +A + V + + + V+A+
Sbjct: 204 LNDLPLFRAVDLAVYVGRGDPPEGVLATP 232
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 854 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLL 902
T+++GDGAND+SM + A + + + ++ +D I + R L ++L
Sbjct: 162 TVAVGDGANDISMFKKAGLKIAFCAKPILKE--KADICI-EKRDLREIL 207
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 854 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLL 902
++ GDGAND+ M++ A G+ + ++ I + LL
Sbjct: 265 IIACGDGANDLPMLEHAGTGIAWKAKPVVRE--KIHHQI-NYHGFELLL 310
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 854 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMA-SDFAIAQFRFLTDLL 902
+ IGDGA D+ A +G G Q V + + I F L L
Sbjct: 174 IIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 854 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLL 902
TL +GDGAND+SM + AHI + + +E ++ + I L +
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIAFNAKEVLKQ--HATHCI-NEPDLALIK 206
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 4e-05
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 854 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLL 902
T+++GDGAND+ M+ AA +GV + ++A + A+ +F L ++
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVAYHAKPKVEA--KAQTAV-RFAGLGGVV 309
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 5e-05
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 854 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDLL 902
T+++GDGAND+ M+ AA +G+ + + ++ +D ++ +L +L
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIAFNAKPALRE--VADASL-SHPYLDTVL 387
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 3e-04
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 660 NEKFIQAKS-SLRDREQKLDEVAE------LIEKDLTLIGCTAIEDKLQEGVPACIETLA 712
N + +Q +K DE+ + D + +ED ++ P I L
Sbjct: 508 NARLMQEHGGDNAPLFEKADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQ 567
Query: 713 RAGIKIWVLTGDKMETAINIA 733
++GI+I +LTGD TA +A
Sbjct: 568 QSGIEIVMLTGDSKRTAEAVA 588
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 4e-04
Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 660 NEKFIQAKSSLRDREQKLDEVAE---LIEKDLTLIGCTAIEDKLQEGVPACIETLARAGI 716
+ + + + +KL+ A+ ++ ++ + G A+ D L+E ++ L R GI
Sbjct: 415 EDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGI 474
Query: 717 KIWVLTGDKMETAINIA 733
K+ ++TGD +A I+
Sbjct: 475 KVGMITGDNWRSAEAIS 491
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 854 TLSIGDGANDVSMIQAAHIGV 874
++ GD ND +M+ AH G+
Sbjct: 148 VIAAGDSYNDTTMLSEAHAGI 168
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 7e-04
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 683 LIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIA 733
+ + I I D + + +E L G+KI +L+GDK + ++
Sbjct: 120 AVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELS 170
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1097 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.83 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.86 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.83 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.82 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.75 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.7 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.43 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.05 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.96 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.94 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.89 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.87 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.85 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.82 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.81 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.76 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.75 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.73 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.72 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.72 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.7 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.69 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.67 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.64 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.63 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.62 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.6 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.59 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.58 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.54 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.47 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.45 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.44 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.44 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.42 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.38 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.38 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.36 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.3 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.29 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.28 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.28 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.26 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.23 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.23 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.21 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.2 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.18 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.17 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.16 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.15 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 98.15 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.11 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.09 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.08 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.03 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.02 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 97.98 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.9 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.9 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 97.89 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.87 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.84 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.83 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.83 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.8 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.78 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.71 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.71 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.71 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.69 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.68 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.68 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.66 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.64 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.63 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.61 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.6 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.59 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.59 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.59 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.55 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.55 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.55 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.55 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.54 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.45 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.45 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.42 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.42 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.4 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.35 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.33 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.33 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.23 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.21 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.2 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.16 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.07 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.07 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.05 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.05 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.04 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.01 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 96.98 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.96 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 96.96 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 96.92 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.78 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.72 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.67 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.64 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.62 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.34 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.26 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.18 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.95 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 95.94 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 95.93 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 95.92 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.83 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 95.77 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 95.56 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 95.43 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.38 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 95.37 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.19 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 95.18 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 94.94 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.67 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 94.6 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 94.52 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 94.41 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 94.25 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 93.86 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 93.85 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 93.43 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 91.32 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 90.56 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 89.25 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 88.72 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 86.19 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 86.11 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 82.17 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-104 Score=1016.13 Aligned_cols=837 Identities=17% Similarity=0.172 Sum_probs=636.8
Q ss_pred CCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhcccc--Cc-------ccCcccchhhHHHHHHHHHHH
Q 001335 53 NQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP--MS-------PVNPVTNVVPLSLVLLVSLIK 123 (1097)
Q Consensus 53 ~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~--~~-------~~~~~~~~~~l~~vl~is~~~ 123 (1097)
.|+++||+|.++.+|.+.+. +.|++||.++++++++++++++++. +. ..+.+...++++++++++++.
T Consensus 80 ~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~ 156 (1034)
T 3ixz_A 80 ELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCF 156 (1034)
T ss_pred HHHHhhCCCCCCCCCCCCHH---HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHHH
Confidence 47889999999988765543 8999999999999999999888753 11 112344556677888899999
Q ss_pred HHHHHHHHhhchhhhc---CceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcc
Q 001335 124 EAWEDWKRFQNDMTIN---STPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGET 200 (1097)
Q Consensus 124 ~~~ed~~r~k~~~~~n---~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs 200 (1097)
++++++|..++.++++ +++++|+|||++++|+|++|+|||||.|++||.||||++|+++++ +.||||+|||||
T Consensus 157 ~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LTGES 232 (1034)
T 3ixz_A 157 GYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLTGES 232 (1034)
T ss_pred HHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecccCCCC
Confidence 9999999998866554 688999999999999999999999999999999999999999886 789999999999
Q ss_pred cceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCc
Q 001335 201 NLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHE 280 (1097)
Q Consensus 201 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~ 280 (1097)
.|+.|.+.+.. ..|+...|++++||.+.+ |.+.|+|++||.+
T Consensus 233 ~pv~K~~~~~~-------------------------------------~~~~~~~n~~f~GT~v~~-G~~~~vVv~tG~~ 274 (1034)
T 3ixz_A 233 EPQTRSPECTH-------------------------------------ESPLETRNIAFFSTMCLE-GTAQGLVVNTGDR 274 (1034)
T ss_pred CCeeccCCCcc-------------------------------------ccccccccceecceeEEe-ecceEEEEeehhh
Confidence 99999875421 112333455555555554 3499999999999
Q ss_pred ccee---eccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHH
Q 001335 281 TKVM---MNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVF 357 (1097)
Q Consensus 281 Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 357 (1097)
|.++ +.....+.+++|+++.++++..++..+.++++++.++++.+... .+
T Consensus 275 T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------------~~ 327 (1034)
T 3ixz_A 275 TIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGY---------------------------TF 327 (1034)
T ss_pred hHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------hH
Confidence 9654 44556778899999999999999988888887777665433211 25
Q ss_pred HHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecce
Q 001335 358 VLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLM 437 (1097)
Q Consensus 358 ~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m 437 (1097)
...+..++.+++.+||++||++++++.+++ +.++ +++++++|+++++|+||++++||||||||||+|+|
T Consensus 328 ~~~~~~~i~l~v~~iPe~Lp~~vti~la~~-~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m 396 (1034)
T 3ixz_A 328 LRAMVFFMAIVVAYVPEGLLATVTVCLSLT-AKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRM 396 (1034)
T ss_pred HHHHHHHHHHHHheeccccHHHHHHHHHHH-HHHH----------hhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeE
Confidence 667888999999999999999999999999 8877 88999999999999999999999999999999999
Q ss_pred EEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccce
Q 001335 438 EFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTV 517 (1097)
Q Consensus 438 ~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~ 517 (1097)
+|.++++++..|..+..+... +. ..+...+....+++++++||++
T Consensus 397 ~v~~~~~~~~~~~~~~~~~~~-----------------------~~------------~~~~~~~~~~~l~~~~~lc~~a 441 (1034)
T 3ixz_A 397 TVSHLWFDNHIHSADTTEDQS-----------------------GQ------------TFDQSSETWRALCRVLTLCNRA 441 (1034)
T ss_pred EEEEEEECCccccccCccccc-----------------------cc------------ccCcCCHHHHHHHHHHHHhccc
Confidence 999999988766532211000 00 0011233566789999999998
Q ss_pred EeccCCCCC--ceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEE
Q 001335 518 LPEGDESPE--RITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVV 595 (1097)
Q Consensus 518 ~~~~~~~~~--~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 595 (1097)
....+++.. .-.+..++|+|.|+++++...|..... ....|+.+..+||+|+||||+++
T Consensus 442 ~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~-------------------~~~~~~~~~~~pF~s~rk~m~~v 502 (1034)
T 3ixz_A 442 AFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG-------------------YRERFPKVCEIPFNSTNKFQLSI 502 (1034)
T ss_pred eeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHH-------------------HHHhCcceEEeeecCCCceEEEE
Confidence 765432211 122346899999999999887643211 14568889999999999999988
Q ss_pred EEec---CCcEEEEEecchhHHHHHhhc---------CchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHH
Q 001335 596 CRYA---DGRLVLYCKGADSVIYERLAN---------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKF 663 (1097)
Q Consensus 596 v~~~---~~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~ 663 (1097)
++.. ++++.+|+|||||.|+++|+. .+++.++.+.+.+++|+.+|+|||++|||+++++++.++....
T Consensus 503 ~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~ 582 (1034)
T 3ixz_A 503 HTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFD 582 (1034)
T ss_pred EEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccc
Confidence 8754 367999999999999999974 2334677788999999999999999999999987665432211
Q ss_pred HHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCC
Q 001335 664 IQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEM 743 (1097)
Q Consensus 664 ~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~ 743 (1097)
+ +..+.+|+||+|+|+++++||+|++++++|++|+++||++||+|||++.||.++|+++|+..++.
T Consensus 583 ---------~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~ 648 (1034)
T 3ixz_A 583 ---------V-----EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGS 648 (1034)
T ss_pred ---------h-----hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCc
Confidence 0 11245689999999999999999999999999999999999999999999999999999976432
Q ss_pred eEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcc-cccCCCeEEEEEcCccchhhcChhHHHHHHhh
Q 001335 744 KQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYI-HSISGEKLALIIDGKCLMYALDPSLRVILLNL 822 (1097)
Q Consensus 744 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l 822 (1097)
.. +. +......... ..........+++|..+....++++.+ .
T Consensus 649 ~~---------i~------------------------~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~----~ 691 (1034)
T 3ixz_A 649 ET---------VE------------------------DIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVE----A 691 (1034)
T ss_pred hH---------HH------------------------HHHHhhCccchhccccccceeEEecHhhhhCCHHHHHH----H
Confidence 10 00 0000000000 011223345678888877654444433 3
Q ss_pred hccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhHHHH-
Q 001335 823 SLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL- 901 (1097)
Q Consensus 823 ~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l~~l- 901 (1097)
...++..+|+|++|+||.++++.+|+ .+++|+|+|||.||++||++||+||||+++....||++||+++.++++...+
T Consensus 692 ~~~~~~~v~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ 770 (1034)
T 3ixz_A 692 LRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVT 770 (1034)
T ss_pred HHhCCceEEEecCHHHHHHHHHHHHH-cCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHH
Confidence 34455679999999999999999998 6999999999999999999999999996455555999999999999985554
Q ss_pred HHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcC
Q 001335 902 LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKY 981 (1097)
Q Consensus 902 ll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~ 981 (1097)
.+.|||++|+|+++++.|.+++|+..+++.+++.++. ...++.++|++|+|++++.+|+++++.. +++..+|++
T Consensus 771 ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~palal~~e---~~~~~~m~~ 844 (1034)
T 3ixz_A 771 GVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS---VPLPLGCITILFIELCTDIFPSVSLAYE---KAESDIMHL 844 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHHHHHHHhhcC---CCChhhhhC
Confidence 4789999999999999999999999999999888774 2345889999999999999999999862 344556655
Q ss_pred chhhhhcc-cccccCHHHHHHH-HHHHHHHHHHHHHhhh-hcCCCccCC---------------------CCc-------
Q 001335 982 PQLYQEGI-KNVFFTWRVVAIW-AFFSVYQSLVLYNCVT-TSSATGQNS---------------------SGK------- 1030 (1097)
Q Consensus 982 P~ly~~~~-~~~~~~~~~~~~~-~~~~~~~~~~if~~~~-~~~~~~~~~---------------------~g~------- 1030 (1097)
|+ +.+ +..+++.+.++.. +..|++++++.|+.++ .+...++.. .|.
T Consensus 845 ~P---r~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (1034)
T 3ixz_A 845 RP---RNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQR 921 (1034)
T ss_pred CC---CCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhh
Confidence 55 354 4678888776653 4458888776665554 221111100 000
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHh-ccc---c--hHHHHHHHHHHHHHHHHHHHHHhccCC
Q 001335 1031 IFGIWDVSTMAFTCVVVTVNLRLLMM-CNT---I--TRFHYITVGGSILAWFLFVFLYTGIMT 1087 (1097)
Q Consensus 1031 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~---~--~~~~~~~~~~si~~~~~~~~~~~~~~~ 1087 (1097)
........|++|+++++.+.+..+.. +.. | .++.+.++|+++++.+++++++.++|+
T Consensus 922 ~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~ 984 (1034)
T 3ixz_A 922 LYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPG 984 (1034)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhh
Confidence 00112357888888887666655432 111 2 235788889999999998888888874
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-102 Score=1001.01 Aligned_cols=858 Identities=20% Similarity=0.222 Sum_probs=619.1
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhcccc-Cccc------CcccchhhHHHHHHHHHHHH
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP-MSPV------NPVTNVVPLSLVLLVSLIKE 124 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~~~------~~~~~~~~l~~vl~is~~~~ 124 (1097)
+.|+++||+|+++.+|+..+. +.|++||++++++++++++++++++ +.+. .|+..++ ++++++++++..
T Consensus 31 ~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~i~ 106 (995)
T 3ar4_A 31 KRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFV-ILLILIANAIVG 106 (995)
T ss_dssp HHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHhcCCCccCCCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHH-hhHHHHHHHHHH
Confidence 347889999999998765442 8999999999999999999999876 3221 2333333 334555666667
Q ss_pred HHHHHHHhhch---hhhcCceEEEeeCCe--EEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCc
Q 001335 125 AWEDWKRFQND---MTINSTPVEVLQGQR--WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGE 199 (1097)
Q Consensus 125 ~~ed~~r~k~~---~~~n~~~~~V~r~g~--~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGE 199 (1097)
.++++|..++. +++.+.+++|+|||+ .++|+|++|+|||||.|++||.||||++|+++++ +.|+||||+||||
T Consensus 107 ~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LTGE 184 (995)
T 3ar4_A 107 VWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGE 184 (995)
T ss_dssp HHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHHCC
T ss_pred HHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEee--ceEEEEcccccCC
Confidence 77777665553 445678999999887 6999999999999999999999999999987653 3499999999999
Q ss_pred ccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecC
Q 001335 200 TNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGH 279 (1097)
Q Consensus 200 s~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~ 279 (1097)
|+|+.|.+.+.. +| ...+.+.+|++++||.+.+ |+++|+|++||+
T Consensus 185 S~pv~K~~~~~~-------------------~~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~tG~ 229 (995)
T 3ar4_A 185 SVSVIKHTEPVP-------------------DP---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATTGV 229 (995)
T ss_dssp CSCEEECCSCCC-------------------CT---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEECGG
T ss_pred CcceeccccccC-------------------Cc---------------ccCcccccceEecCCEEEc-ceEEEEEEEcCc
Confidence 999999876421 01 1124567899999999998 789999999999
Q ss_pred ccceee---ccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHH
Q 001335 280 ETKVMM---NSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLV 356 (1097)
Q Consensus 280 ~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 356 (1097)
+|++++ ....++.+++|+|+++|++..++..+++++|++.++++..+.. . ... .......
T Consensus 230 ~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~-----------~~~~~~~ 292 (995)
T 3ar4_A 230 STEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN-D-----PVH-----------GGSWIRG 292 (995)
T ss_dssp GSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGG-S-----CSS-----------SSCHHHH
T ss_pred chHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-c-----ccc-----------cchHHHH
Confidence 997754 4456778899999999999999988888887776554332110 0 000 0011223
Q ss_pred HHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecc
Q 001335 357 FVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNL 436 (1097)
Q Consensus 357 ~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~ 436 (1097)
+...|..++.+++.+||++||++++++.+++ +.++ +++++++|+++++|+||++|+||||||||||+|+
T Consensus 293 ~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~-~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~ 361 (995)
T 3ar4_A 293 AIYYFKIAVALAVAAIPEGLPAVITTCLALG-TRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 361 (995)
T ss_dssp HHHHHHHHHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCC
T ss_pred HHHHHHHHHHHHHHhcCcchHHHHHHHHHHH-HHHh----------ccCCcEeccchhhhhhcCceEEEecCCCCcccCc
Confidence 3456778899999999999999999999998 7766 6789999999999999999999999999999999
Q ss_pred eEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccc
Q 001335 437 MEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHT 516 (1097)
Q Consensus 437 m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~ 516 (1097)
|+|+++++.+..++.... .........+. . +.+ .....+........+...+++.++++||+
T Consensus 362 m~v~~~~~~~~~~~~~~~-~~~~~~~~~~~-~-----------p~~-----~~~~~~~~~~~~~~~~~~~l~~~~alc~~ 423 (995)
T 3ar4_A 362 MSVCKMFIIDKVDGDFCS-LNEFSITGSTY-A-----------PEG-----EVLKNDKPIRSGQFDGLVELATICALCND 423 (995)
T ss_dssp CEEEEEEEEEEEETTEEE-EEEEEECCSSS-S-----------SCC-----CEEETTEECCGGGCHHHHHHHHHHHHSCC
T ss_pred eEEEEEEecCcccCcccc-cceeeccCCCc-C-----------Ccc-----ccccccccccccccHHHHHHHHHHHHcCC
Confidence 999999987654331000 00000000000 0 000 00000000011223456788999999999
Q ss_pred eEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEE
Q 001335 517 VLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVC 596 (1097)
Q Consensus 517 ~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv 596 (1097)
+....++..+.+ ...+||+|.|++.++++.|+ +.. ....+...+... .........|++++.+||+|+||||||++
T Consensus 424 ~~~~~~~~~~~~-~~~g~p~E~Al~~~a~~~g~-~~~-~~~~i~~~~~~~-~~~~~~~~~~~~~~~~pF~s~rk~msvi~ 499 (995)
T 3ar4_A 424 SSLDFNETKGVY-EKVGEATETALTTLVEKMNV-FNT-EVRNLSKVERAN-ACNSVIRQLMKKEFTLEFSRDRKSMSVYC 499 (995)
T ss_dssp CEEEEETTTTEE-EEESCHHHHHHHHHHHHHCT-TCC-CCTTSCTTTSTT-HHHHHHHHHEEEEEEEEEETTTTEEEEEE
T ss_pred CcccccCCCCce-eecCCccHHHHHHHHHHcCC-ccc-cccccccccccc-cchhhhhhhCceEEEeecCCCCCeeEEEE
Confidence 876543322222 23489999999999999887 211 100000000000 00000134689999999999999999999
Q ss_pred EecCC-----cEEEEEecchhHHHHHhhcC---------chhHHHHHHHHHHHH--HhcCCeEEEEEEEecCHHHHHHHH
Q 001335 597 RYADG-----RLVLYCKGADSVIYERLANG---------NEDLKKVTREHLEQF--GSSGLRTLCLAYRDLSPDMYERWN 660 (1097)
Q Consensus 597 ~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~--a~~GlR~l~~A~r~l~~~~~~~~~ 660 (1097)
+.++| ++.+|+|||||.|+++|... +.+.++.+.+++++| +++|+|||++|||+++..+.
T Consensus 500 ~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~---- 575 (995)
T 3ar4_A 500 SPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE---- 575 (995)
T ss_dssp EESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG----
T ss_pred ecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccc----
Confidence 98666 68999999999999999642 234567788899999 99999999999999864210
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 661 EKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 661 ~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
...+.+ ...++.+|+|++|+|+++++|++|++++++|+.|+++||++||+|||+..||.++|+++||..
T Consensus 576 ------~~~~~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~ 644 (995)
T 3ar4_A 576 ------EMVLDD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFG 644 (995)
T ss_dssp ------GCCTTC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSC
T ss_pred ------cccccc-----chhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCC
Confidence 001111 113467899999999999999999999999999999999999999999999999999999976
Q ss_pred CCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHH
Q 001335 741 NEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILL 820 (1097)
Q Consensus 741 ~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~ 820 (1097)
.+... . ..+++|+++..+.++++.+...
T Consensus 645 ~~~~i-----~-----------------------------------------------~~~~~g~~~~~l~~~~~~~~~~ 672 (995)
T 3ar4_A 645 ENEEV-----A-----------------------------------------------DRAYTGREFDDLPLAEQREACR 672 (995)
T ss_dssp TTCCC-----T-----------------------------------------------TTEEEHHHHHTSCHHHHHHHHH
T ss_pred CCCcc-----c-----------------------------------------------ceEEEchhhhhCCHHHHHHHHh
Confidence 43210 0 0134454444332223333222
Q ss_pred hhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHh--
Q 001335 821 NLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRF-- 897 (1097)
Q Consensus 821 ~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~-- 897 (1097)
+..+|||++|+||.++|+.+|+ .|+.|+|+|||.||++||++||+||||+ |++. |+++||+++.++++
T Consensus 673 ------~~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~--ak~aAd~vl~~~~~~~ 743 (995)
T 3ar4_A 673 ------RACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPALKKAEIGIAMGSGTAV--AKTASEMVLADDNFST 743 (995)
T ss_dssp ------HCCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHHHHSTEEEEETTSCHH--HHHTCSEEETTCCHHH
T ss_pred ------hCcEEEEeCHHHHHHHHHHHHH-CCCEEEEEcCCchhHHHHHHCCeEEEeCCCCHH--HHHhCCEEECCCCHHH
Confidence 2459999999999999999999 5899999999999999999999999994 4444 89999999987666
Q ss_pred HHHHHHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhh
Q 001335 898 LTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASL 977 (1097)
Q Consensus 898 l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~ 977 (1097)
+.++ +.|||++|+|+++++.|.+++|+...++.+++.++. + ..++.++|++|+|++++.+|++++++.+. +++.
T Consensus 744 i~~~-i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g-~--~~pl~~~qil~~nl~~d~~p~l~l~~~~~--~~~~ 817 (995)
T 3ar4_A 744 IVAA-VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG-L--PEALIPVQLLWVNLVTDGLPATALGFNPP--DLDI 817 (995)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-C--CCSSCHHHHHHHHHTTTHHHHHHHTTCCC--CTTG
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C--cchHHHHHHHHHHHHHHHHHHHhhccCCC--ChhH
Confidence 5665 899999999999999999999999988888877663 2 24578899999999999999999998543 3455
Q ss_pred hhcCchhhhhcccccccCHHHHHHHHHHHHHHHHHHHHhhh-hcC-CC-c--cC-----------CCCcc--------ch
Q 001335 978 SKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSS-AT-G--QN-----------SSGKI--------FG 1033 (1097)
Q Consensus 978 ~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~-~~~-~~-~--~~-----------~~g~~--------~~ 1033 (1097)
+.+.|. .+++.+++++.++.|++.|+++++++++.++ ++. .. . .. .++.. ..
T Consensus 818 m~~~P~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 893 (995)
T 3ar4_A 818 MDRPPR----SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFE 893 (995)
T ss_dssp GGSCCC----CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGG
T ss_pred HhCCCC----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccccccccccccccccccc
Confidence 555554 6678899999999999999999988765433 221 10 0 00 00000 01
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcc-c---c--hHHHHHHHHHHHHHHHHHHHHHhccC
Q 001335 1034 IWDVSTMAFTCVVVTVNLRLLMMCN-T---I--TRFHYITVGGSILAWFLFVFLYTGIM 1086 (1097)
Q Consensus 1034 ~~~~~~~~~~~~v~~~~~~~~~~~~-~---~--~~~~~~~~~~si~~~~~~~~~~~~~~ 1086 (1097)
....+|++|++++++..++.+...+ . | ..+.+..+++++++.+++++++.++|
T Consensus 894 ~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p 952 (995)
T 3ar4_A 894 APEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVD 952 (995)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHST
T ss_pred chhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 1246888999888877766543211 1 1 23455666666666666555555555
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-103 Score=1010.26 Aligned_cols=834 Identities=19% Similarity=0.215 Sum_probs=630.9
Q ss_pred CCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccC--c---c----cCcccchhhHHHHHHHHHHH
Q 001335 53 NQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPM--S---P----VNPVTNVVPLSLVLLVSLIK 123 (1097)
Q Consensus 53 ~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~--~---~----~~~~~~~~~l~~vl~is~~~ 123 (1097)
.|+++||+|+++.+|...+. +.|++||.++++++++++++++++.+ . . .+.+...++++++++++++.
T Consensus 75 ~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~ 151 (1028)
T 2zxe_A 75 EILARDGPNSLTPPPTTPEW---IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCF 151 (1028)
T ss_dssp HHHHHHCCSCCCCCCCCCHH---HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 47889999999987544332 89999999999999999999987641 1 0 01233455677888899999
Q ss_pred HHHHHHHHhhchhh---hcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcc
Q 001335 124 EAWEDWKRFQNDMT---INSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGET 200 (1097)
Q Consensus 124 ~~~ed~~r~k~~~~---~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs 200 (1097)
++++++|..++.+. +.+++++|+|||++++|++++|+|||||.|++||.||||++|++|++ |+||||+|||||
T Consensus 152 ~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LTGES 227 (1028)
T 2zxe_A 152 SYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLTGES 227 (1028)
T ss_dssp HHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccCCCC
Confidence 99999887776554 45789999999999999999999999999999999999999999975 899999999999
Q ss_pred cceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCc
Q 001335 201 NLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHE 280 (1097)
Q Consensus 201 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~ 280 (1097)
.|+.|.+.+.. ..|++.+|++++||.+.+ |+++|+|++||++
T Consensus 228 ~pv~K~~~~~~-------------------------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG~~ 269 (1028)
T 2zxe_A 228 EPQTRSPEFSS-------------------------------------ENPLETRNIAFFSTNCVE-GTARGVVVYTGDR 269 (1028)
T ss_dssp SCEECCSSCCC-------------------------------------SSTTTCSSEECTTCEEEE-EEEEEEEEECGGG
T ss_pred cceecccCCCC-------------------------------------CCcccccceEEeCceEEc-ceEEEEEEEeccc
Confidence 99999876411 115677899999999987 6799999999999
Q ss_pred ccee---eccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHH
Q 001335 281 TKVM---MNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVF 357 (1097)
Q Consensus 281 Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 357 (1097)
|+++ ++...++.+++++|+.+++++.+++.+.++++++.+++..+ .... +
T Consensus 270 T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~~--------------------------~ 322 (1028)
T 2zxe_A 270 TVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI-LGYS--------------------------W 322 (1028)
T ss_dssp SHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCC--------------------------H
T ss_pred cHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCc--------------------------H
Confidence 9664 45556788899999999999999999888888877665432 2111 3
Q ss_pred HHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecce
Q 001335 358 VLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLM 437 (1097)
Q Consensus 358 ~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m 437 (1097)
...+..++.+++.+||++||++++++.+++ +.++ +++++++|+++.+|+||++++||||||||||+|+|
T Consensus 323 ~~~~~~~i~llv~~iP~~Lp~~vti~l~~~-~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m 391 (1028)
T 2zxe_A 323 LEAVIFLIGIIVANVPEGLLATVTVCLTLT-AKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRM 391 (1028)
T ss_dssp HHHHHHHHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSC
T ss_pred HHHHHHHHHHHHHHcCchHHHHHHHHHHHH-HHHH----------hhCCceeccchHhhhhcCceEEeccCCCCCCCCeE
Confidence 345667778888899999999999999999 8876 78899999999999999999999999999999999
Q ss_pred EEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccce
Q 001335 438 EFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTV 517 (1097)
Q Consensus 438 ~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~ 517 (1097)
+|.++++++..|.....+.+ .+.. .+..++..+.++.++++||++
T Consensus 392 ~v~~~~~~~~~~~~~~~~~~-----------------------~~~~------------~~~~~~~~~~l~~~~alc~~~ 436 (1028)
T 2zxe_A 392 TVAHMWFDNQIHEADTTENQ-----------------------SGAA------------FDKTSATWSALSRIAALCNRA 436 (1028)
T ss_dssp EEEEEEETTEEEECCCCTTC-----------------------CSCC------------CCSSCHHHHHHHHHHHHSCCC
T ss_pred EEEEEEECCeeeeccCCCCc-----------------------cccc------------cccCCHHHHHHHHHHHhcCCC
Confidence 99999998876643211000 0000 001223456788999999999
Q ss_pred EeccCCCCCc--eEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEE
Q 001335 518 LPEGDESPER--ITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVV 595 (1097)
Q Consensus 518 ~~~~~~~~~~--~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 595 (1097)
..+.+++... -.+..+||+|.||+++|++.|..... ....|+++..+||+|+||||+++
T Consensus 437 ~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~-------------------~~~~~~~~~~~pF~s~rk~msvi 497 (1028)
T 2zxe_A 437 VFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQG-------------------MRDRNPKIVEIPFNSTNKYQLSI 497 (1028)
T ss_dssp EECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHH-------------------HHHHSCEEEEECCCTTTCEEEEE
T ss_pred eeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHH-------------------HHHhCceEEEeccCcccceEEEE
Confidence 8754322111 11235899999999999876421000 12347788999999999999999
Q ss_pred EEec---CCcEEEEEecchhHHHHHhhcC---------chhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHH
Q 001335 596 CRYA---DGRLVLYCKGADSVIYERLANG---------NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKF 663 (1097)
Q Consensus 596 v~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~ 663 (1097)
++.+ ++++++|+|||||.|+++|... +.+.++.+.+++++|+++|+|||++|||+++++++.++.+
T Consensus 498 ~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~-- 575 (1028)
T 2zxe_A 498 HENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYP-- 575 (1028)
T ss_dssp EECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCC--
T ss_pred EeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc--
Confidence 9974 5788999999999999999741 2345677889999999999999999999997654322100
Q ss_pred HHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCC
Q 001335 664 IQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEM 743 (1097)
Q Consensus 664 ~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~ 743 (1097)
. +++ ..+.+|+|++|+|+++++||+|++++++|++|+++||++||+|||+..||.++|++|||...+.
T Consensus 576 ------~-~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~ 643 (1028)
T 2zxe_A 576 ------F-DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGN 643 (1028)
T ss_dssp ------C-CTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTC
T ss_pred ------c-chh-----hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCc
Confidence 0 000 0123578999999999999999999999999999999999999999999999999999975432
Q ss_pred eEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhh-cccccCCCeEEEEEcCccchhhcChhHHHHHHhh
Q 001335 744 KQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQ-YIHSISGEKLALIIDGKCLMYALDPSLRVILLNL 822 (1097)
Q Consensus 744 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l 822 (1097)
.. +.+ .. ...+. ............+++|.++....++++. ++
T Consensus 644 ~~---------i~~-----------------~~-------~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~----~~ 686 (1028)
T 2zxe_A 644 ET---------IED-----------------IA-------ARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLD----DI 686 (1028)
T ss_dssp CC---------HHH-----------------HH-------HHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHH----HH
T ss_pred hh---------HHH-----------------HH-------hhcCcchhhccccccceEEEEcHHhhhCCHHHHH----HH
Confidence 11 000 00 00000 0000112233568889887765443333 33
Q ss_pred hccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec--CccchhhhhhcceeccchHh--H
Q 001335 823 SLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS--GQEGMQAVMASDFAIAQFRF--L 898 (1097)
Q Consensus 823 ~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~--g~e~~~a~~~AD~vi~~~~~--l 898 (1097)
...++.++|||++|+||..+|+.+|+ .|++|+|+|||.||++||++|||||||+ |++. |+++||+++.++++ +
T Consensus 687 ~~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~--ak~aAD~Vl~~~~~~~I 763 (1028)
T 2zxe_A 687 LHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDV--SKQAADMILLDDNFASI 763 (1028)
T ss_dssp HHHCSEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHH--HHHHCSEEETTCCTHHH
T ss_pred HhhCCcEEEEEcCHHHHHHHHHHHHh-CCCEEEEEcCCcchHHHHHhCCceEEeCCccCHH--HHHhcCEEecCCCHHHH
Confidence 44455679999999999999999999 6899999999999999999999999995 4454 89999999998655 6
Q ss_pred HHHHHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhh
Q 001335 899 TDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLS 978 (1097)
Q Consensus 899 ~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~ 978 (1097)
.++ +.|||++|+|+++++.|.+++|+..+++.+++.++.. ..++.+++++|+|++++.+|+++++. |+ +.++.+
T Consensus 764 ~~~-i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~---~~~l~~~qil~inl~~d~~pa~al~~-e~-~~~~~m 837 (1028)
T 2zxe_A 764 VTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNV---PLPLGTVTILCIDLGTDMVPAISLAY-EQ-AESDIM 837 (1028)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCC---CCSSCHHHHHHHHTTTTHHHHHHGGG-CC-CSSCGG
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---cchhHHHHHHHHHHHHHHHHHHHhcc-Cc-cchhhh
Confidence 666 8999999999999999999999999888888777632 23478899999999999999999985 43 334444
Q ss_pred hcCchhhhhccc-ccccCHHHHHH-HHHHHHHHHHHHHHhhh-hcCCCcc-------------C--------CCCccc--
Q 001335 979 KKYPQLYQEGIK-NVFFTWRVVAI-WAFFSVYQSLVLYNCVT-TSSATGQ-------------N--------SSGKIF-- 1032 (1097)
Q Consensus 979 ~~~P~ly~~~~~-~~~~~~~~~~~-~~~~~~~~~~~if~~~~-~~~~~~~-------------~--------~~g~~~-- 1032 (1097)
.+.|. .++ +++++++.++. |+..|++++++.|+.++ .+...++ . ..|...
T Consensus 838 ~~~Pr----~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1028)
T 2zxe_A 838 KRQPR----NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTY 913 (1028)
T ss_dssp GSCCC----CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECH
T ss_pred ccCCC----CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccch
Confidence 44453 333 48999998776 56789999988876554 2211110 0 011110
Q ss_pred -----hhhHHHHHHHHHHHHHHHHHHHHh-cccchH----HHHHHHHHHHHHHHHHHHHHhccCC
Q 001335 1033 -----GIWDVSTMAFTCVVVTVNLRLLMM-CNTITR----FHYITVGGSILAWFLFVFLYTGIMT 1087 (1097)
Q Consensus 1033 -----~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~----~~~~~~~~si~~~~~~~~~~~~~~~ 1087 (1097)
......|++|+++++.+.+..+.. ++..++ +.+..+|+++++.+++++++.++|+
T Consensus 914 ~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~ 978 (1028)
T 2zxe_A 914 EQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPG 978 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTT
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhh
Confidence 112568999999988877776543 333332 2456777777777777777777774
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-96 Score=915.00 Aligned_cols=735 Identities=16% Similarity=0.182 Sum_probs=550.6
Q ss_pred CCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccCcccCcccchhhHHHHHHHHHHHHHHHHHHHh
Q 001335 53 NQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRF 132 (1097)
Q Consensus 53 ~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~is~~~~~~ed~~r~ 132 (1097)
.|+++||+|+++.+|+++| +.|++||..+++++++++++++++. ..|..++ .++++++++++.+++++++..
T Consensus 95 ~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~---g~~~~~~-~i~~vv~i~~~i~~~qe~~a~ 166 (920)
T 1mhs_A 95 QRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGL---EDWVDFG-VICGLLLLNAVVGFVQEFQAG 166 (920)
T ss_dssp HHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTC---SCSSHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHH---HhHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 3678999999999888876 7889999999999999999998874 3444443 455677788888999999999
Q ss_pred hchhhhc---CceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeecccc
Q 001335 133 QNDMTIN---STPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALE 209 (1097)
Q Consensus 133 k~~~~~n---~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~~ 209 (1097)
++.+.++ +.+++|+|||++++|++++|+|||||.|++||.||||++|+++++ .+.||||+|||||.|+.|.+.+
T Consensus 167 ~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~---~l~VDES~LTGES~PV~K~~gd 243 (920)
T 1mhs_A 167 SIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDA---FLQVDQSALTGESLAVDKHKGD 243 (920)
T ss_dssp HHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESS---CCEEBCTTTSSCCCCEECCSSC
T ss_pred HHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCc---eeeeeccccCCCCcceEecCCC
Confidence 8876655 578999999999999999999999999999999999999999872 1699999999999999998754
Q ss_pred cccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceeecc--
Q 001335 210 RTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNS-- 287 (1097)
Q Consensus 210 ~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~~~-- 287 (1097)
..|+||++.+|. +.++|++||.+|++++..
T Consensus 244 ---------------------------~v~sGT~v~~G~---------------------~~~~V~~tG~~T~~g~I~~l 275 (920)
T 1mhs_A 244 ---------------------------QVFASSAVKRGE---------------------AFVVITATGDNTFVGRAAAL 275 (920)
T ss_dssp ---------------------------EECSCBCCSCCC---------------------EEEEEEECSTTCSTTTTTSS
T ss_pred ---------------------------eeecCceEecce---------------------EEEEEEEeCCcCHHHHHHHH
Confidence 567777666665 999999999999876643
Q ss_pred -CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHHHHHHH
Q 001335 288 -MNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLIT 366 (1097)
Q Consensus 288 -~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 366 (1097)
...+.+++++++.++++..+++++.++++++.++.+. | ... .+...|..++.
T Consensus 276 v~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~--------~-~~~------------------~~~~~l~~av~ 328 (920)
T 1mhs_A 276 VNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSF--------Y-RSN------------------PIVQILEFTLA 328 (920)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--------T-TTC------------------CHHHHHHHHHH
T ss_pred HhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------h-cCC------------------cHHHHHHHHHH
Confidence 4566778999999999998887777666655433211 1 000 14557778899
Q ss_pred HhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEEEEEcc
Q 001335 367 LYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGG 446 (1097)
Q Consensus 367 l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~ 446 (1097)
+++.+||++||++++++.+++ +.++ +++++++|+++.+|+||++|+||||||||||+|+|+|.+++..+
T Consensus 329 llV~aiP~aLp~~vti~la~g-~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~ 397 (920)
T 1mhs_A 329 ITIIGVPVGLPAVVTTTMAVG-AAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVA 397 (920)
T ss_dssp HHHHHSCCCHHHHHHHHHHHH-HHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCS
T ss_pred HHHHhCchhHHHHHHHHHHHH-HHHH----------HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecC
Confidence 999999999999999999998 8776 77899999999999999999999999999999999998764321
Q ss_pred eeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEeccCCCCC
Q 001335 447 EIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPE 526 (1097)
Q Consensus 447 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~ 526 (1097)
.. ++ .+++.+.++|+....
T Consensus 398 g~-------------------------------------------------~~-----~~ll~~a~l~~~~~~------- 416 (920)
T 1mhs_A 398 GV-------------------------------------------------DP-----EDLMLTACLAASRKK------- 416 (920)
T ss_dssp CC-------------------------------------------------CC-----THHHHHHHHSCCCSS-------
T ss_pred CC-------------------------------------------------CH-----HHHHHHHHHhcCCcc-------
Confidence 00 00 124556677765311
Q ss_pred ceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEE
Q 001335 527 RITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLY 606 (1097)
Q Consensus 527 ~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 606 (1097)
..+||+|.|+++++++.+... + ....|++++.+||+|.||||+++++.++|+.+++
T Consensus 417 ----~~~~P~e~Al~~~~~~~~~~~------------------~--~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~ 472 (920)
T 1mhs_A 417 ----KGIDAIDKAFLKSLKYYPRAK------------------S--VLSKYKVLQFHPFDPVSKKVVAVVESPQGERITC 472 (920)
T ss_dssp ----CSCCSHHHHHHHHHHHSSSCC------------------G--GGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEE
T ss_pred ----cCCChHHHHHHHHHHhcccch------------------h--hccccceeEEeeccCCCCeEEEEEEeCCCcEEEE
Confidence 024999999999998766310 0 0234778899999999999999998778888899
Q ss_pred EecchhHHHHHhhcC---chhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 001335 607 CKGADSVIYERLANG---NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAEL 683 (1097)
Q Consensus 607 ~KGa~~~i~~~~~~~---~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~ 683 (1097)
+||||+.|+++|... +.+.++.+.+++++|+.+|+||+++|+|..
T Consensus 473 ~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~-------------------------------- 520 (920)
T 1mhs_A 473 VKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-------------------------------- 520 (920)
T ss_dssp EEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS--------------------------------
T ss_pred EeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc--------------------------------
Confidence 999999999999752 334567788899999999999999999741
Q ss_pred HhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCC
Q 001335 684 IEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGD 763 (1097)
Q Consensus 684 iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~ 763 (1097)
|++++|+|+++++||+|++++++|++|+++||++||+|||++.||.+||+++||.... ++.+.
T Consensus 521 -e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~-----~~~~~----------- 583 (920)
T 1mhs_A 521 -EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNI-----YNAER----------- 583 (920)
T ss_dssp -SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSC-----CCSSS-----------
T ss_pred -ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccc-----cCccc-----------
Confidence 4689999999999999999999999999999999999999999999999999996421 00000
Q ss_pred hHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHH
Q 001335 764 PVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVT 843 (1097)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv 843 (1097)
++++|.. .+.++++. +.. .+..+|+|++|+||.++|
T Consensus 584 ------------------------------------~~~~g~~--~~~~~el~----~~~--~~~~V~arv~P~~K~~iV 619 (920)
T 1mhs_A 584 ------------------------------------LGLGGGG--DMPGSEVY----DFV--EAADGFAEVFPQHKYNVV 619 (920)
T ss_dssp ------------------------------------SSSCBCC--CGGGGGGG----TTT--TTTSCEESCCSTHHHHHH
T ss_pred ------------------------------------eeecCcc--cCCHHHHH----HHH--hhCeEEEEeCHHHHHHHH
Confidence 0111110 00011111 111 123499999999999999
Q ss_pred HHHHcccCceEEEecCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHh--HHHHHHhhhhhhHHHHhHHHHHH
Q 001335 844 SLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRF--LTDLLLVHGRWSYLRICKVVLYF 920 (1097)
Q Consensus 844 ~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~--l~~lll~~Gr~~~~~i~~~i~~~ 920 (1097)
+.+|+ .|+.|+|+|||.||++||++|||||||+ |++. |+++||+++.++++ +..+ +.+||++|+|+++++.|.
T Consensus 620 ~~Lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADiVl~~~~~~~I~~a-i~~gR~~~~ni~k~i~~~ 695 (920)
T 1mhs_A 620 EILQQ-RGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDA--ARSAADIVFLAPGLGAIIDA-LKTSRQIFHRMYAYVVYR 695 (920)
T ss_dssp HHHHT-TTCCCEECCCCGGGHHHHHHSSEEEEETTSCHH--HHHSSSEEESSCCSHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHh-CCCeEEEEcCCcccHHHHHhCCcCcccccccHH--HHHhcCeEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 99999 6899999999999999999999999995 3443 89999999998777 5555 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhhcccccccCHHHHH
Q 001335 921 FYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVA 1000 (1097)
Q Consensus 921 ~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~ 1000 (1097)
++.|+.+.+..+++..+.+++ +++.+++|.|++.+. |++++++...+. + +.|. .++.. +.+.
T Consensus 696 l~~n~~~~~~~~~~~~~~~~~----l~~~~il~~~l~~d~-~~lal~~e~~~~--~---~~P~----~~~~~----~~~~ 757 (920)
T 1mhs_A 696 IALSIHLEIFLGLWIAILNRS----LNIELVVFIAIFADV-ATLAIAYDNAPY--S---QTPV----KWNLP----KLWG 757 (920)
T ss_dssp HHHHHHHHHHHHHHHHSCSCC----CCHHHHHHHHHHHTT-HHHHCCCCCSGG--G---GSCC----CCCSS----SCSS
T ss_pred HHHHHHHHHHHHHHHHHHhcc----CCHHHHHHHHHHHHH-HhhhhcccCccc--c---cCCC----CchHH----HHHH
Confidence 999998754444444444443 456677788877775 999998744322 1 3343 11111 1112
Q ss_pred HHHHHHHHHHHHHHHhhh-hcCCCccCCCCccchhhHHHHHHHHHHHHHHHHHHHHh-ccc--chHHHHHHHHHHHHHHH
Q 001335 1001 IWAFFSVYQSLVLYNCVT-TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMM-CNT--ITRFHYITVGGSILAWF 1076 (1097)
Q Consensus 1001 ~~~~~~~~~~~~if~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~--~~~~~~~~~~~si~~~~ 1076 (1097)
..++.|++.++..++.+. .+... ..+|.........|++|+++++...+.++.. +.. |.-..+..+++++++..
T Consensus 758 ~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~ 835 (920)
T 1mhs_A 758 MSVLLGVVLAVGTWITVTTMYAQG--ENGGIVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVD 835 (920)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTT--TTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--ccccccchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHH
Confidence 223456666655444333 22110 0111111122478999999998887776532 111 22224455666666666
Q ss_pred HHHHHHhccC
Q 001335 1077 LFVFLYTGIM 1086 (1097)
Q Consensus 1077 ~~~~~~~~~~ 1086 (1097)
++..++.++|
T Consensus 836 ~~~~~~~~~~ 845 (920)
T 1mhs_A 836 ILATCFTIWG 845 (920)
T ss_dssp HHHHHHHSSS
T ss_pred HHHHHHHHhh
Confidence 6666666666
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-94 Score=897.88 Aligned_cols=677 Identities=17% Similarity=0.198 Sum_probs=509.2
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccCc----ccCcccchhhHHHHHHHHHHHHHHH
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMS----PVNPVTNVVPLSLVLLVSLIKEAWE 127 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~----~~~~~~~~~~l~~vl~is~~~~~~e 127 (1097)
+.|+++||+|+++.++++.| +.|++||.+|++++++++++++++... +..|..++ .++++++++.+.+.++
T Consensus 39 ~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~-~I~~~v~i~~~l~~~q 113 (885)
T 3b8c_A 39 EDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFV-GIICLLVINSTISFIE 113 (885)
T ss_dssp HHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHH-HHHHHTTTTTTTTTTT
T ss_pred HHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHH-HHHHHHHHHHHHHHHH
Confidence 34789999999999887776 667799999999999999999887411 12455554 4445666777778888
Q ss_pred HHHHhhchhh---hcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCccccee
Q 001335 128 DWKRFQNDMT---INSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKI 204 (1097)
Q Consensus 128 d~~r~k~~~~---~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~ 204 (1097)
++|..++.+. +.+.+++|+|||++++|++++|+|||||.|++||.||||++|++|++ |.||||+|||||.|+.
T Consensus 114 e~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv~ 189 (885)
T 3b8c_A 114 ENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPVT 189 (885)
T ss_dssp TTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCCC
T ss_pred HHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcceE
Confidence 8877776554 35788999999999999999999999999999999999999999885 6899999999999999
Q ss_pred ecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCcccee
Q 001335 205 RKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVM 284 (1097)
Q Consensus 205 K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~ 284 (1097)
|.+.+ ..|+||.+.+|. +.++|++||.+|.++
T Consensus 190 K~~g~---------------------------~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~g 221 (885)
T 3b8c_A 190 KHPGQ---------------------------EVFSGSTCKQGE---------------------IEAVVIATGVHTFFG 221 (885)
T ss_dssp BSSCC---------------------------CCCSCCCCCSCC---------------------CCCBCCSCTTTTTST
T ss_pred ecCCC---------------------------ccccCeEEeeeE---------------------EEEEEEEcCcccHHH
Confidence 98654 456666666555 899999999999876
Q ss_pred eccC--CCCCcccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHH
Q 001335 285 MNSM--NIPSKRSTLERKLDKLILALFA-TLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNM 361 (1097)
Q Consensus 285 ~~~~--~~~~k~s~l~~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (1097)
+... +...+++++|+.++++..+++. +++.++++.++.+.+ .. .. +...+
T Consensus 222 ~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~-~~-------------------------~~~~~ 274 (885)
T 3b8c_A 222 KAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI-QR-RK-------------------------YRDGI 274 (885)
T ss_dssp TCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTT-TC-SC-------------------------STTHH
T ss_pred HHHHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cc-Cc-------------------------HHHHH
Confidence 5432 2256789999999999876433 222222222111111 00 00 12357
Q ss_pred HHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEE
Q 001335 362 FTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFK 441 (1097)
Q Consensus 362 ~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~ 441 (1097)
..++.+++.+||++||++++++.+++ +.++ +++++++|+++.+|+||++|+||||||||||+|+|+|.+
T Consensus 275 ~~~v~llv~aiP~aLp~~vti~la~g-~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~ 343 (885)
T 3b8c_A 275 DNLLVLLIGGIPIAMPTVLSVTMAIG-SHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK 343 (885)
T ss_dssp HHHHHHTTTTCCSSTTTHHHHTTTHH-HHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCS
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHH-HHHH----------HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEE
Confidence 78999999999999999999998888 7766 889999999999999999999999999999999999863
Q ss_pred EEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEecc
Q 001335 442 CSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEG 521 (1097)
Q Consensus 442 ~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~ 521 (1097)
+.+. .++.+ . ...+++...++|+...
T Consensus 344 ~~~~--~~~~~----------------------------------------------~---~~~~ll~~aa~~~~~~--- 369 (885)
T 3b8c_A 344 NLVE--VFCKG----------------------------------------------V---EKDQVLLFAAMASRVE--- 369 (885)
T ss_dssp CCCC--SSCSS----------------------------------------------T---THHHHHHHHHHHCCSS---
T ss_pred EEEe--ccCCC----------------------------------------------C---CHHHHHHHHHHHhCCC---
Confidence 2210 00000 0 1134667778887531
Q ss_pred CCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCC
Q 001335 522 DESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADG 601 (1097)
Q Consensus 522 ~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~ 601 (1097)
.+||.|.|+++++.+.. . ....+++++.+||+|.||||+++++..+|
T Consensus 370 ----------~~~p~~~Al~~~~~~~~---------~--------------~~~~~~~~~~~pF~s~~k~~sv~~~~~~g 416 (885)
T 3b8c_A 370 ----------NQDAIDAAMVGMLADPK---------E--------------ARAGIREVHFLPFNPVDKRTALTYIDGSG 416 (885)
T ss_dssp ----------SCCSHHHHHHHTTCCTT---------C--------------CCCSSCCBCCCCCCTTTCCCCCBBCSSSS
T ss_pred ----------CCCchHHHHHHHhhchh---------h--------------HhhcCceeecccCCcccceEEEEEEecCC
Confidence 37999999999764310 0 02336678889999999999999987778
Q ss_pred cEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 001335 602 RLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVA 681 (1097)
Q Consensus 602 ~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~ 681 (1097)
+.++++||||+.|+++|.... +.++.+.+++++|+++|+||+++|+|++++++.
T Consensus 417 ~~~~~~KGa~e~il~~c~~~~-~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~------------------------- 470 (885)
T 3b8c_A 417 NWHRVSKGAPEQILELAKASN-DLSKKVLSIIDKYAERGLRSLAVARQVVPEKTK------------------------- 470 (885)
T ss_dssp CBCBCCCCSGGGTSSSSCCCS-TTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSS-------------------------
T ss_pred cEEEEEeCCHHHHHHhccCch-hhHHHHHHHHHHHHhCCCeEEEEEEeccccccc-------------------------
Confidence 888999999999999997432 345567788999999999999999998875321
Q ss_pred HHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccC
Q 001335 682 ELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEER 761 (1097)
Q Consensus 682 ~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~ 761 (1097)
+..|+|++|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++||..+.. ...
T Consensus 471 ~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~-------~~~-------- 535 (885)
T 3b8c_A 471 ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-------PSS-------- 535 (885)
T ss_dssp SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS-------TTS--------
T ss_pred cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccC-------Ccc--------
Confidence 34578999999999999999999999999999999999999999999999999999964210 000
Q ss_pred CChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhc-ChhHHHHHHhhhccCCceEEEEeCcccHH
Q 001335 762 GDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYAL-DPSLRVILLNLSLNCSSVVCCRVSPLQKA 840 (1097)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l-~~~l~~~f~~l~~~~~~vi~~r~sP~qK~ 840 (1097)
++.|.+++..+ +.++.+...+ ..+|+|++|+||.
T Consensus 536 ---------------------------------------~l~g~~~~~~~~~~~l~~~~~~------~~v~arv~P~~K~ 570 (885)
T 3b8c_A 536 ---------------------------------------ALLGTHKDANLASIPVEELIEK------ADGFAGVFPEHKY 570 (885)
T ss_dssp ---------------------------------------SCCBGGGGTTSCCSCHHHHHHT------SCCEECCCHHHHH
T ss_pred ---------------------------------------eeeccccccccchhHHHHHHhh------CcEEEEECHHHHH
Confidence 11122222111 1122222221 2389999999999
Q ss_pred HHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHh--HHHHHHhhhhhhHHHHhHHH
Q 001335 841 QVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRF--LTDLLLVHGRWSYLRICKVV 917 (1097)
Q Consensus 841 ~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~--l~~lll~~Gr~~~~~i~~~i 917 (1097)
++|+.+|+ .|+.|+|+|||.||++||++|||||||+ |++. |+++||+++.++++ +..+ +.+||++|+|+++++
T Consensus 571 ~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADivl~~~~~~~I~~a-i~~gR~~~~ni~~~i 646 (885)
T 3b8c_A 571 EIVKKLQE-RKHIVGMTGDGVNDAPALKKADIGIAVADATDA--ARGASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYT 646 (885)
T ss_dssp HHHHHHHH-TTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHH--HGGGCSSCCSSCSHHHHTHH-HHTHHHHHHHHHHHH
T ss_pred HHHHHHHH-CCCeEEEEcCCchhHHHHHhCCEeEEeCCccHH--HHHhcceeeccCchhHHHHH-HHHHHHHHHHHHHHH
Confidence 99999998 6899999999999999999999999995 3333 88999999998877 4444 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhhcccccccCHH
Q 001335 918 LYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWR 997 (1097)
Q Consensus 918 ~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~ 997 (1097)
.|.+..|+...+..++..+ ++. .++.+++++|+|++.+..+ +.++. |. +.+ |+ .++.. ...+
T Consensus 647 ~~~l~~n~~~~~~~~~~~~--~~~--~~l~p~~il~i~l~~d~~~-l~l~~-~~-~~~------~~----~p~~~-~~~~ 708 (885)
T 3b8c_A 647 IYAVSITIRIVFGFMLIAL--IWE--FDFSAFMVLIIAILNDGTI-MTISK-DR-VKP------SP----TPDSW-KLKE 708 (885)
T ss_dssp HHHHHHTTTTTSTTHHHHS--SCS--SCSCHHHHHHHHHHHHTTT-CCCCC-CC-CCC------SS----CCCST-TTTT
T ss_pred HHHHHHHHHHHHHHHHHHH--ccC--cCcCHHHHHHHHHHHHHHH-Hhhcc-cc-cCc------cc----CCcch-hHHH
Confidence 9999999876555444443 222 2467899999999998875 56653 21 111 11 12222 2233
Q ss_pred HHHHHHHHHHHHHHHHHHhhh
Q 001335 998 VVAIWAFFSVYQSLVLYNCVT 1018 (1097)
Q Consensus 998 ~~~~~~~~~~~~~~~if~~~~ 1018 (1097)
.+..+++.|++++++.+++++
T Consensus 709 ~~~~~~~~g~~~~~~~~~~~~ 729 (885)
T 3b8c_A 709 IFATGVVLGGYQAIMTVIFFW 729 (885)
T ss_dssp TTTTHHHHHSSTHHHHTTSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 455566788888887766544
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-70 Score=675.09 Aligned_cols=491 Identities=18% Similarity=0.231 Sum_probs=404.5
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhh------cCceEEEee-CCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCc
Q 001335 115 LVLLVSLIKEAWEDWKRFQNDMTI------NSTPVEVLQ-GQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADG 187 (1097)
Q Consensus 115 ~vl~is~~~~~~ed~~r~k~~~~~------n~~~~~V~r-~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g 187 (1097)
+++++..+.+.+|.+.|+|+.+.+ .+++++|+| ||++++|++++|+|||+|.|++||.||||++|++|+
T Consensus 193 ~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~---- 268 (736)
T 3rfu_A 193 VITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGR---- 268 (736)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECc----
Confidence 444555677888998888875443 477888887 999999999999999999999999999999999977
Q ss_pred eEEEEccccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecC
Q 001335 188 VCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNT 267 (1097)
Q Consensus 188 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt 267 (1097)
++||||+|||||.|+.|.+.+ .+|+||++.+|.
T Consensus 269 -~~VDES~LTGES~Pv~K~~gd---------------------------~v~~Gt~~~~G~------------------- 301 (736)
T 3rfu_A 269 -SFVDESMVTGEPIPVAKEASA---------------------------KVIGATINQTGS------------------- 301 (736)
T ss_dssp -EEEECSSSTTCSSCEEECTTC---------------------------EECTTCEEESCC-------------------
T ss_pred -eEeeecccCCccccEEeccCC---------------------------cCCCceEeccce-------------------
Confidence 799999999999999998876 677888888777
Q ss_pred CeEEEEEEEecCccce---eeccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCcc
Q 001335 268 EYIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVE 344 (1097)
Q Consensus 268 ~~~~gvVv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~ 344 (1097)
+.+.|++||.+|.+ .+...+++.+++++|+.+|++..++++++++++++++++|.++....
T Consensus 302 --~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~-------------- 365 (736)
T 3rfu_A 302 --FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP-------------- 365 (736)
T ss_dssp --CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS--------------
T ss_pred --EEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc--------------
Confidence 89999999999954 45555667788999999999999999999999999888776553211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEE
Q 001335 345 DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYI 424 (1097)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i 424 (1097)
.+...+..++.+++.+|||+|+++++++...+ ..++ +++++++|+++.+|+||++|+|
T Consensus 366 -----------~~~~~l~~ai~vlviacPcaL~la~p~a~~~~-~~~~----------a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 366 -----------ALSYGLIAAVSVLIIACPCALGLATPMSIMVG-VGKG----------AQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp -----------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHH-HHHH----------HHTTEEESCHHHHHHHTSCCEE
T ss_pred -----------hHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHH-HHHH----------hhcceeechHHHHHHhcCCCEE
Confidence 02346888999999999999999999999998 7766 7789999999999999999999
Q ss_pred EecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHH
Q 001335 425 FSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDAC 504 (1097)
Q Consensus 425 ~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 504 (1097)
|||||||||+|+|++.++..++.. .
T Consensus 424 ~fDKTGTLT~g~~~v~~i~~~~~~-------------------------------------------------------~ 448 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIVTDDFV-------------------------------------------------------E 448 (736)
T ss_dssp EECCBTTTBCSSCEEEEEEESSSC-------------------------------------------------------H
T ss_pred EEeCCCCCcCCceEEEEEEecCCC-------------------------------------------------------H
Confidence 999999999999999998733211 0
Q ss_pred HHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeec
Q 001335 505 KEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLE 584 (1097)
Q Consensus 505 ~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~ 584 (1097)
.+++...+.+ ++.++||++.|+++++++.|+.+. ...+
T Consensus 449 ~~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~~~----------------------------~~~~ 486 (736)
T 3rfu_A 449 DNALALAAAL--------------EHQSEHPLANAIVHAAKEKGLSLG----------------------------SVEA 486 (736)
T ss_dssp HHHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCCCC----------------------------CCSC
T ss_pred HHHHHHHHHH--------------hhcCCChHHHHHHHHHHhcCCCcc----------------------------Cccc
Confidence 1122222211 123579999999999998775421 1246
Q ss_pred CCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHH
Q 001335 585 FNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFI 664 (1097)
Q Consensus 585 F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~ 664 (1097)
|++.+++. +... .+|+. +.+|+++.+.+.... .....+.+++++.+|+|++++|+
T Consensus 487 f~~~~g~g-v~~~-~~g~~--~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~vl~va~---------------- 541 (736)
T 3rfu_A 487 FEAPTGKG-VVGQ-VDGHH--VAIGNARLMQEHGGD-----NAPLFEKADELRGKGASVMFMAV---------------- 541 (736)
T ss_dssp CCCCTTTE-EEEC-SSSSC--EEEESHHHHHHHCCC-----CHHHHHHHHHHHHTTCEEEEEEE----------------
T ss_pred ccccCCce-EEEE-ECCEE--EEEcCHHHHHHcCCC-----hhHHHHHHHHHHhcCCeEEEEEE----------------
Confidence 77776653 3333 23332 345999887654322 12456678899999999999996
Q ss_pred HHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCe
Q 001335 665 QAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK 744 (1097)
Q Consensus 665 ~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~ 744 (1097)
|.+++|+++++|++|++++++|++|+++||+++|+|||+..+|..+|+++|+..
T Consensus 542 ----------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~---- 595 (736)
T 3rfu_A 542 ----------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK---- 595 (736)
T ss_dssp ----------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC----
T ss_pred ----------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE----
Confidence 678999999999999999999999999999999999999999999999999831
Q ss_pred EEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhc
Q 001335 745 QFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSL 824 (1097)
Q Consensus 745 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~ 824 (1097)
T Consensus 596 -------------------------------------------------------------------------------- 595 (736)
T 3rfu_A 596 -------------------------------------------------------------------------------- 595 (736)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHh--HHHH
Q 001335 825 NCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRF--LTDL 901 (1097)
Q Consensus 825 ~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~--l~~l 901 (1097)
++++++|++|.++++.+++ .++.|+|+|||.||++||++||+||+|+ |++. ++++||+++.+.++ +..+
T Consensus 596 -----v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~--a~~~AD~vl~~~~~~~i~~a 667 (736)
T 3rfu_A 596 -----VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMGTGTDV--AIESAGVTLLHGDLRGIAKA 667 (736)
T ss_dssp -----EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEESSSCSH--HHHHCSEEECSCCSTTHHHH
T ss_pred -----EEEecCHHHHHHHHHHHHh-cCCEEEEEECChHhHHHHHhCCEEEEeCCccHH--HHHhCCEEEccCCHHHHHHH
Confidence 8899999999999999998 6899999999999999999999999994 4444 99999999987666 5555
Q ss_pred HHhhhhhhHHHHhHHHHHHHHHHHHHHHHH
Q 001335 902 LLVHGRWSYLRICKVVLYFFYKNLTFTLTQ 931 (1097)
Q Consensus 902 ll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~ 931 (1097)
+.+||.+++++++++.|.|.+|++.+.+.
T Consensus 668 -i~~sr~t~~~i~qnl~~a~~yN~~~iplA 696 (736)
T 3rfu_A 668 -RRLSESTMSNIRQNLFFAFIYNVLGVPLA 696 (736)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999998875443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-69 Score=665.01 Aligned_cols=486 Identities=19% Similarity=0.253 Sum_probs=394.6
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhh------cCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCce
Q 001335 115 LVLLVSLIKEAWEDWKRFQNDMTI------NSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 188 (1097)
Q Consensus 115 ~vl~is~~~~~~ed~~r~k~~~~~------n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~ 188 (1097)
+++++..+.+.+|++.++|+.+.+ .+++++|+|||+++++++++|+|||+|.|++||.||||++|++|+
T Consensus 179 ~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~----- 253 (723)
T 3j09_A 179 LLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE----- 253 (723)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECC-----
Confidence 344445667889999988875443 467999999999999999999999999999999999999999977
Q ss_pred EEEEccccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCC
Q 001335 189 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 268 (1097)
Q Consensus 189 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 268 (1097)
|+||||+|||||.|+.|.+.+ .+|+|+++.+|.
T Consensus 254 ~~VdeS~LTGES~pv~K~~g~---------------------------~v~~Gt~~~~g~-------------------- 286 (723)
T 3j09_A 254 SYVDESMISGEPVPVLKSKGD---------------------------EVFGATINNTGV-------------------- 286 (723)
T ss_dssp EEEECHHHHCCSSCEEECTTC---------------------------EECTTCEECSSC--------------------
T ss_pred eEEecccccCCCcceeecCCC---------------------------eeccceEEecCc--------------------
Confidence 899999999999999998765 566666666555
Q ss_pred eEEEEEEEecCcc---ceeeccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccC
Q 001335 269 YIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVED 345 (1097)
Q Consensus 269 ~~~gvVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~ 345 (1097)
+.+.|++||.+| ++.+...+++.+++++|+.+|++..+++++++++++++++.|.++....
T Consensus 287 -~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~~--------------- 350 (723)
T 3j09_A 287 -LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHAP--------------- 350 (723)
T ss_dssp -EEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTCT---------------
T ss_pred -EEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---------------
Confidence 999999999999 4556667888899999999999999999998888888766543322110
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEE
Q 001335 346 DQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIF 425 (1097)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~ 425 (1097)
+...+..++.+++.+|||+|+++++++...+ ..++ +++++++|+++.+|+||++|+||
T Consensus 351 -----------~~~~~~~~i~vlvia~P~aL~la~p~a~~~~-~~~~----------a~~gilvk~~~~lE~lg~v~~i~ 408 (723)
T 3j09_A 351 -----------LLFAFTTLIAVLVVACPCAFGLATPTALTVG-MGKG----------AELGILIKNADALEVAEKVTAVI 408 (723)
T ss_dssp -----------TCCSHHHHHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HTTTCEESSTTHHHHGGGCCEEE
T ss_pred -----------HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH-HHHH----------HHCCeEEeChHHHHHhhcCCEEE
Confidence 1225778899999999999999999999988 7766 78899999999999999999999
Q ss_pred ecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHH
Q 001335 426 SDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACK 505 (1097)
Q Consensus 426 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 505 (1097)
||||||||+|+|+|.++...+.. ..
T Consensus 409 fDKTGTLT~g~~~v~~~~~~~~~-------------------------------------------------------~~ 433 (723)
T 3j09_A 409 FDKTGTLTKGKPEVTDLVPLNGD-------------------------------------------------------ER 433 (723)
T ss_dssp EEHHHHTSCSCCEEEEEEESSSC-------------------------------------------------------HH
T ss_pred EcCCCccccCceEEEEEEeCCCC-------------------------------------------------------HH
Confidence 99999999999999998764311 11
Q ss_pred HHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecC
Q 001335 506 EFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEF 585 (1097)
Q Consensus 506 ~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F 585 (1097)
+++...+.|.. .++||++.|+++++++.|+...... +|
T Consensus 434 ~~l~~aa~~e~--------------~s~hP~~~Ai~~~a~~~~~~~~~~~----------------------------~~ 471 (723)
T 3j09_A 434 ELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPE----------------------------KV 471 (723)
T ss_dssp HHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCC----------------------------CC
T ss_pred HHHHHHHHHhc--------------cCCCchhHHHHHHHHhcCCCcCCcc----------------------------ce
Confidence 23444444322 2579999999999999886532210 01
Q ss_pred CCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHH
Q 001335 586 NSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQ 665 (1097)
Q Consensus 586 ~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~ 665 (1097)
.+...+ ++.. .. +.+|+++.+.+... ...+.+.+++++++.+|+|++++|+
T Consensus 472 ~~~~g~-g~~~----~~---~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~va~----------------- 522 (723)
T 3j09_A 472 EVIAGE-GVVA----DG---ILVGNKRLMEDFGV----AVSNEVELALEKLEREAKTAVIVAR----------------- 522 (723)
T ss_dssp EEETTT-EEEE----TT---EEEECHHHHHHTTC----CCCHHHHHHHHHHHTTTCEEEEEEE-----------------
T ss_pred EEecCC-ceEE----EE---EEECCHHHHHhcCC----CccHHHHHHHHHHHhcCCeEEEEEE-----------------
Confidence 111111 1111 22 34488876654322 2234677788999999999999996
Q ss_pred HHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeE
Q 001335 666 AKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQ 745 (1097)
Q Consensus 666 a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~ 745 (1097)
|++++|+++++|++|++++++|+.|+++||+++|+|||+..+|.++|+++|+..
T Consensus 523 ---------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~----- 576 (723)
T 3j09_A 523 ---------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL----- 576 (723)
T ss_dssp ---------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-----
T ss_pred ---------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE-----
Confidence 679999999999999999999999999999999999999999999999999831
Q ss_pred EEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhcc
Q 001335 746 FIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLN 825 (1097)
Q Consensus 746 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~ 825 (1097)
T Consensus 577 -------------------------------------------------------------------------------- 576 (723)
T 3j09_A 577 -------------------------------------------------------------------------------- 576 (723)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHh--HHHHH
Q 001335 826 CSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRF--LTDLL 902 (1097)
Q Consensus 826 ~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~--l~~ll 902 (1097)
++++++|++|..+++.+++ . +.|+|+|||.||++||++||+||+|+ |.+. ++++||+++.++++ +..+
T Consensus 577 ----~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~- 647 (723)
T 3j09_A 577 ----VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA- 647 (723)
T ss_dssp ----EECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECCCCSCC--SSCCSSEECSSCCTTHHHHH-
T ss_pred ----EEccCCHHHHHHHHHHHhc-C-CeEEEEECChhhHHHHhhCCEEEEeCCCcHH--HHHhCCEEEeCCCHHHHHHH-
Confidence 8999999999999999998 4 89999999999999999999999994 4444 89999999977666 5555
Q ss_pred HhhhhhhHHHHhHHHHHHHHHHHHHHHHH
Q 001335 903 LVHGRWSYLRICKVVLYFFYKNLTFTLTQ 931 (1097)
Q Consensus 903 l~~Gr~~~~~i~~~i~~~~~~ni~~~~~~ 931 (1097)
+.+||++++++++++.|.|++|++.+...
T Consensus 648 i~~~r~~~~~i~~nl~~a~~~n~~~i~~a 676 (723)
T 3j09_A 648 IQLSRKTMSKIKQNIFWALIYNVILIPAA 676 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999998864443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-69 Score=658.38 Aligned_cols=485 Identities=19% Similarity=0.249 Sum_probs=393.6
Q ss_pred HHHHHHHHHHHHHHHHhhchhh------hcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceE
Q 001335 116 VLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVC 189 (1097)
Q Consensus 116 vl~is~~~~~~ed~~r~k~~~~------~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~ 189 (1097)
++++..+.+.+|++.++|+.+. +.+++++|+|||+++++++++|+|||+|.|++||.||||++|++|+ |
T Consensus 102 i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~-----~ 176 (645)
T 3j08_A 102 LLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-----S 176 (645)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-----E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECc-----E
Confidence 3444466788899998876443 4578999999999999999999999999999999999999999977 8
Q ss_pred EEEccccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCe
Q 001335 190 YIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEY 269 (1097)
Q Consensus 190 ~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~ 269 (1097)
+||||+|||||.|+.|.+.+ .+|+|+++.+|.
T Consensus 177 ~VdeS~LTGES~Pv~K~~g~---------------------------~v~~Gt~~~~g~--------------------- 208 (645)
T 3j08_A 177 YVDESMISGEPVPVLKSKGD---------------------------EVFGATINNTGV--------------------- 208 (645)
T ss_dssp EEECHHHHCCSSCEEECTTC---------------------------EECTTCEECSSC---------------------
T ss_pred EEEcccccCCCCceecCCCC---------------------------EeeccEEEecCc---------------------
Confidence 99999999999999998765 566676666655
Q ss_pred EEEEEEEecCcc---ceeeccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCC
Q 001335 270 IIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDD 346 (1097)
Q Consensus 270 ~~gvVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~ 346 (1097)
+.+.|++||.+| ++.+...+++.+++++|+.+|++..+++++++++++++++.|.++.... |
T Consensus 209 ~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~~-~-------------- 273 (645)
T 3j08_A 209 LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHAP-L-------------- 273 (645)
T ss_dssp EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSCS-C--------------
T ss_pred EEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-H--------------
Confidence 999999999999 4556667888899999999999999999999888888876654332110 1
Q ss_pred CCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEe
Q 001335 347 QFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFS 426 (1097)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~ 426 (1097)
...+..++.+++.+|||+|+++++++...+ ..++ +++++++|+++.+|+||++|+|||
T Consensus 274 -----------~~~~~~~i~vlvia~P~aL~la~p~a~~~~-~~~~----------a~~gilvk~~~~lE~lg~v~~i~f 331 (645)
T 3j08_A 274 -----------LFAFTTLIAVLVVACPCAFGLATPTALTVG-MGKG----------AELGILIKNADALEVAEKVTAVIF 331 (645)
T ss_dssp -----------CCTTTTTHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HTTCCCCSSTTHHHHGGGCCEEEE
T ss_pred -----------HHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHH----------HHCCeEecCchHHHHhhCCCEEEE
Confidence 124566788999999999999999999988 7766 788999999999999999999999
Q ss_pred cCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHH
Q 001335 427 DKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKE 506 (1097)
Q Consensus 427 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 506 (1097)
|||||||+|+|+|.++...+.. ..+
T Consensus 332 DKTGTLT~~~~~v~~~~~~~~~-------------------------------------------------------~~~ 356 (645)
T 3j08_A 332 DKTGTLTKGKPEVTDLVPLNGD-------------------------------------------------------ERE 356 (645)
T ss_dssp EGGGTSSSSCCEEEEEEESSSC-------------------------------------------------------HHH
T ss_pred cCcccccCCCeEEEEEEeCCCC-------------------------------------------------------HHH
Confidence 9999999999999998765311 123
Q ss_pred HHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCC
Q 001335 507 FFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFN 586 (1097)
Q Consensus 507 ~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~ 586 (1097)
++...+.|+. .++||++.|+++++++.|+...... +|+
T Consensus 357 ~l~~aa~~e~--------------~s~hPla~Aiv~~a~~~g~~~~~~~----------------------------~~~ 394 (645)
T 3j08_A 357 LLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPE----------------------------KVE 394 (645)
T ss_dssp HHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCC----------------------------CCE
T ss_pred HHHHHHHHhh--------------cCCChhHHHHHHHHHhcCCCcCCcc----------------------------ceE
Confidence 4444444422 2579999999999999886532110 111
Q ss_pred CCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHH
Q 001335 587 STRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQA 666 (1097)
Q Consensus 587 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a 666 (1097)
+...+ ++.. .. +.+|+++.+.+... ...+.+.+++++++.+|+|++++|+
T Consensus 395 ~~~g~-g~~~----~~---v~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~l~va~------------------ 444 (645)
T 3j08_A 395 VIAGE-GVVA----DG---ILVGNKRLMEDFGV----AVSNEVELALEKLEREAKTAVIVAR------------------ 444 (645)
T ss_dssp EETTT-EEEE----TT---EEEECHHHHHHTTC----CCCHHHHHHHHHHHTTTCCCEEEEE------------------
T ss_pred EecCC-ceEE----EE---EEECCHHHHHhcCC----CccHHHHHHHHHHHhcCCeEEEEEE------------------
Confidence 11111 1111 22 34488876654222 2335667788899999999999996
Q ss_pred HhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEE
Q 001335 667 KSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQF 746 (1097)
Q Consensus 667 ~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i 746 (1097)
|++++|+++++|++|++++++|++|+++||+++|+|||+..+|..+|+++|+..
T Consensus 445 --------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~------ 498 (645)
T 3j08_A 445 --------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------ 498 (645)
T ss_dssp --------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE------
T ss_pred --------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE------
Confidence 679999999999999999999999999999999999999999999999999831
Q ss_pred EEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccC
Q 001335 747 IITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNC 826 (1097)
Q Consensus 747 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~ 826 (1097)
T Consensus 499 -------------------------------------------------------------------------------- 498 (645)
T 3j08_A 499 -------------------------------------------------------------------------------- 498 (645)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHh--HHHHHH
Q 001335 827 SSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRF--LTDLLL 903 (1097)
Q Consensus 827 ~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~--l~~lll 903 (1097)
++++++|++|..+++.+++ . +.|+|+|||.||++|++.||+||+|+ |.+. ++++||+++.++++ +..+ +
T Consensus 499 ---~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~-i 570 (645)
T 3j08_A 499 ---VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA-I 570 (645)
T ss_dssp ---EECSCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEECCCSCC--SSCCSSSEESSCCTTHHHHH-H
T ss_pred ---EEEeCCHHhHHHHHHHHhh-C-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHH--HHHhCCEEEecCCHHHHHHH-H
Confidence 8999999999999999998 4 89999999999999999999999994 4443 89999999976665 5565 7
Q ss_pred hhhhhhHHHHhHHHHHHHHHHHHHHHHH
Q 001335 904 VHGRWSYLRICKVVLYFFYKNLTFTLTQ 931 (1097)
Q Consensus 904 ~~Gr~~~~~i~~~i~~~~~~ni~~~~~~ 931 (1097)
.+||++++|+++++.|.+++|++.+...
T Consensus 571 ~~~r~~~~~i~~nl~~a~~~N~~~i~la 598 (645)
T 3j08_A 571 QLSRKTMSKIKQNIFWALIYNVILIPAA 598 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999998854443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-25 Score=243.68 Aligned_cols=137 Identities=22% Similarity=0.299 Sum_probs=115.2
Q ss_pred CceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHH
Q 001335 687 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE 766 (1097)
Q Consensus 687 ~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 766 (1097)
+-.+.|.+.++|+++|+++++|+.|++.|++++|+|||+..++..+++.+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 446789999999999999999999999999999999999999999999988731
Q ss_pred HHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHH
Q 001335 767 IARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLV 846 (1097)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~l 846 (1097)
+|..+.|+.|..+++.+
T Consensus 178 ---------------------------------------------------------------~f~~~~p~~k~~~~~~l 194 (263)
T 2yj3_A 178 ---------------------------------------------------------------YYSNLSPEDKVRIIEKL 194 (263)
Confidence 44555599999999998
Q ss_pred HcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceec--cchHhHHHHHHhhhhhhHHHHhH
Q 001335 847 KKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAI--AQFRFLTDLLLVHGRWSYLRICK 915 (1097)
Q Consensus 847 k~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi--~~~~~l~~lll~~Gr~~~~~i~~ 915 (1097)
+. .++.++|||||.||++|++.||+||++... ...+...||+++ .++.-+..+ +..+|.+++++++
T Consensus 195 ~~-~~~~~~~VGD~~~D~~aa~~Agv~va~g~~-~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 195 KQ-NGNKVLMIGDGVNDAAALALADVSVAMGNG-VDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
Confidence 87 577899999999999999999999999432 223678899999 444446555 7889999988875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=209.74 Aligned_cols=272 Identities=22% Similarity=0.274 Sum_probs=193.0
Q ss_pred CCCCceeccCccccccccceEEEecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCC
Q 001335 403 SNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKG 482 (1097)
Q Consensus 403 ~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (1097)
+++++++|+++.+|.|+++++|+||||||||.+.+.+..+...+. +
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~------~---------------------------- 59 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------D---------------------------- 59 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS------C----------------------------
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC------C----------------------------
Confidence 789999999999999999999999999999999999988765421 0
Q ss_pred CCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEE
Q 001335 483 FNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVR 562 (1097)
Q Consensus 483 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~ 562 (1097)
. .+++..+ ..+ + ..+.||.+.|+.+++++.|+..... .
T Consensus 60 ------------------~---~~~l~~~---~~~--e---------~~s~hp~~~a~~~~~~~~g~~~~~~--~----- 97 (287)
T 3a1c_A 60 ------------------E---RELLRLA---AIA--E---------RRSEHPIAEAIVKKALEHGIELGEP--E----- 97 (287)
T ss_dssp ------------------H---HHHHHHH---HHH--T---------TTCCSHHHHHHHHHHHHTTCCCCCC--S-----
T ss_pred ------------------H---HHHHHHH---HHH--h---------hcCCCHHHHHHHHHHHhcCCCcccc--c-----
Confidence 0 1122222 221 1 1257999999999999988642110 0
Q ss_pred eccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCe
Q 001335 563 ESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLR 642 (1097)
Q Consensus 563 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR 642 (1097)
.+.. +. .+ ++. . .. +.+|.++.+.+.... .++.+.+..+.+..+|.+
T Consensus 98 -------------~~~~---~~----G~--~~~--~--~~---~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~ 144 (287)
T 3a1c_A 98 -------------KVEV---IA----GE--GVV--A--DG---ILVGNKRLMEDFGVA----VSNEVELALEKLEREAKT 144 (287)
T ss_dssp -------------CEEE---ET----TT--EEE--E--TT---EEEECHHHHHHTTCC----CCHHHHHHHHHHHHTTCE
T ss_pred -------------ccee---ec----CC--CeE--E--EE---EEECCHHHHHhcCCC----ccHHHHHHHHHHHhCCCe
Confidence 0100 00 00 111 0 12 234665444321111 112345566788889999
Q ss_pred EEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEc
Q 001335 643 TLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLT 722 (1097)
Q Consensus 643 ~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlT 722 (1097)
++++++ |..++|.+..+++++|+++++|+.|+++|+++.++|
T Consensus 145 ~i~~~~--------------------------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T 186 (287)
T 3a1c_A 145 AVIVAR--------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMIT 186 (287)
T ss_dssp EEEEEE--------------------------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEE--------------------------------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEe
Confidence 999996 457899999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEE
Q 001335 723 GDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALII 802 (1097)
Q Consensus 723 GD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 802 (1097)
|+....+..+++.+|+..
T Consensus 187 ~~~~~~~~~~l~~~gl~~-------------------------------------------------------------- 204 (287)
T 3a1c_A 187 GDNWRSAEAISRELNLDL-------------------------------------------------------------- 204 (287)
T ss_dssp SSCHHHHHHHHHHHTCSE--------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHhCCce--------------------------------------------------------------
Confidence 999999999999988731
Q ss_pred cCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccch
Q 001335 803 DGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGM 882 (1097)
Q Consensus 803 ~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~ 882 (1097)
.|..+.|..|...++.+.. . ..+++|||+.||+.|.+.||++|++.+...
T Consensus 205 ---------------------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~- 254 (287)
T 3a1c_A 205 ---------------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSD- 254 (287)
T ss_dssp ---------------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHHHHHSSEEEEECCCSC-
T ss_pred ---------------------------eeeecChHHHHHHHHHHhc-C-CeEEEEECCHHHHHHHHHCCeeEEeCCCCH-
Confidence 3444558899999998887 4 889999999999999999999999943322
Q ss_pred hhhhhcceec--cchHhHHHHHHhhhhhhHHHHh
Q 001335 883 QAVMASDFAI--AQFRFLTDLLLVHGRWSYLRIC 914 (1097)
Q Consensus 883 ~a~~~AD~vi--~~~~~l~~lll~~Gr~~~~~i~ 914 (1097)
..+..||+++ .++.-+..+ +..+|.++++++
T Consensus 255 ~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 255 VAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp CSSCCSSEEESSSCTHHHHHH-HHTTC-------
T ss_pred HHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhhC
Confidence 2567899999 666666665 788999888764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-19 Score=199.51 Aligned_cols=274 Identities=22% Similarity=0.252 Sum_probs=185.5
Q ss_pred eccCccccccccceEEEecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCCh
Q 001335 409 ARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDP 488 (1097)
Q Consensus 409 ~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (1097)
+|+++.+|.|++++.|+||++||||.|+|++..+...+.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~----------------------------------------- 39 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH----------------------------------------- 39 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS-----------------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC-----------------------------------------
Confidence 478899999999999999999999999999998764321
Q ss_pred HhhhcccCCCCChhHHHHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccc
Q 001335 489 RLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEK 568 (1097)
Q Consensus 489 ~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~ 568 (1097)
...+++..++.+.. .+.+|...++.++++..|+....
T Consensus 40 --------------~~~~~~~~~~~~~~--------------~s~~~~~~a~~~~~~~~g~~~~~--------------- 76 (280)
T 3skx_A 40 --------------SEDELLQIAASLEA--------------RSEHPIAAAIVEEAEKRGFGLTE--------------- 76 (280)
T ss_dssp --------------CHHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCC---------------
T ss_pred --------------CHHHHHHHHHHhhc--------------cCCCHHHHHHHHHHHhcCCCCCC---------------
Confidence 01123333332211 13588999999999998864311
Q ss_pred cCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEE
Q 001335 569 MGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAY 648 (1097)
Q Consensus 569 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~ 648 (1097)
...+. .++ .+.+...+ ....+ ..|.++.+........ +....+...+.+.+.+++
T Consensus 77 -----~~~~~---~~~----g~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 131 (280)
T 3skx_A 77 -----VEEFR---AIP----GKGVEGIV--NGRRY---MVVSPGYIRELGIKTD--------ESVEKLKQQGKTVVFILK 131 (280)
T ss_dssp -----CEEEE---EET----TTEEEEEE--TTEEE---EEECHHHHHHTTCCCC--------TTHHHHHTTTCEEEEEEE
T ss_pred -----cccee---ecC----CCEEEEEE--CCEEE---EEecHHHHHHcCCCch--------HHHHHHHhCCCeEEEEEE
Confidence 11111 111 11122222 12222 2366665544322211 234566788888888775
Q ss_pred EecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 001335 649 RDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMET 728 (1097)
Q Consensus 649 r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 728 (1097)
+..++|.+.++|+++++++++++.|++.|+++.++||+....
T Consensus 132 --------------------------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~ 173 (280)
T 3skx_A 132 --------------------------------------NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFV 173 (280)
T ss_dssp --------------------------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred --------------------------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 557899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccch
Q 001335 729 AINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLM 808 (1097)
Q Consensus 729 a~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 808 (1097)
+..+++.+|+..
T Consensus 174 ~~~~~~~~gl~~-------------------------------------------------------------------- 185 (280)
T 3skx_A 174 AKWVAEELGLDD-------------------------------------------------------------------- 185 (280)
T ss_dssp HHHHHHHHTCSE--------------------------------------------------------------------
T ss_pred HHHHHHHcCChh--------------------------------------------------------------------
Confidence 999999998731
Q ss_pred hhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhc
Q 001335 809 YALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMAS 888 (1097)
Q Consensus 809 ~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~A 888 (1097)
.|..+.|.+|...++.+.+ .. .++||||+.||+.|++.||+||+|.+... .++..|
T Consensus 186 ---------------------~f~~~~~~~k~~~~k~~~~-~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~-~~~~~a 241 (280)
T 3skx_A 186 ---------------------YFAEVLPHEKAEKVKEVQQ-KY-VTAMVGDGVNDAPALAQADVGIAIGAGTD-VAVETA 241 (280)
T ss_dssp ---------------------EECSCCGGGHHHHHHHHHT-TS-CEEEEECTTTTHHHHHHSSEEEECSCCSS-SCCCSS
T ss_pred ---------------------HhHhcCHHHHHHHHHHHHh-cC-CEEEEeCCchhHHHHHhCCceEEecCCcH-HHHhhC
Confidence 4555668899999998887 33 57999999999999999999999954332 277889
Q ss_pred ceec--cchHhHHHHHHhhhhhhHHHHhHHHHHHHH
Q 001335 889 DFAI--AQFRFLTDLLLVHGRWSYLRICKVVLYFFY 922 (1097)
Q Consensus 889 D~vi--~~~~~l~~lll~~Gr~~~~~i~~~i~~~~~ 922 (1097)
|+++ .+..-+..+ +..+|..++++++++.|.+.
T Consensus 242 ~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 242 DIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp SEECSSCCTHHHHHH-HHHHHTCCC-----------
T ss_pred CEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 9998 445546665 67899999888888777653
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.82 E-value=6.4e-21 Score=177.26 Aligned_cols=99 Identities=17% Similarity=0.286 Sum_probs=90.1
Q ss_pred chhhhcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeecccccccC
Q 001335 134 NDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWD 213 (1097)
Q Consensus 134 ~~~~~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~~~~~~ 213 (1097)
+...+.+++++|+|+|+++++++++|+|||+|.|++||.+|||++|++++ +.||||+|||||.|+.|.+.+
T Consensus 5 ~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-----~~vdeS~LTGEs~pv~k~~g~---- 75 (113)
T 2hc8_A 5 KLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-----SYVDESMISGEPVPVLKSKGD---- 75 (113)
T ss_dssp HHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-----EEEECHHHHCCSSCEEECTTC----
T ss_pred HHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-----EEEEccccCCCCccEEECCCC----
Confidence 34556789999999999999999999999999999999999999999986 899999999999999998875
Q ss_pred CCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceee
Q 001335 214 YLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM 285 (1097)
Q Consensus 214 ~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~ 285 (1097)
.+|+|+++.+|. +.+.|++||.+|.+.+
T Consensus 76 -----------------------~v~aGt~~~~G~---------------------~~~~V~~~g~~T~~~~ 103 (113)
T 2hc8_A 76 -----------------------EVFGATINNTGV---------------------LKIRATRVGGETLLAQ 103 (113)
T ss_dssp -----------------------EECTTCEECSSC---------------------EEEEEEECGGGSHHHH
T ss_pred -----------------------EEEeCCEEeece---------------------EEEEEEEecCcCHHHH
Confidence 678888888887 9999999999997643
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.4e-19 Score=167.96 Aligned_cols=98 Identities=16% Similarity=0.240 Sum_probs=87.4
Q ss_pred hhhhcCceEEEeeCCe------EEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeeccc
Q 001335 135 DMTINSTPVEVLQGQR------WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKAL 208 (1097)
Q Consensus 135 ~~~~n~~~~~V~r~g~------~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~ 208 (1097)
...+.+.+++|+|+|. +++++.++|+|||+|.|++||.||||++|++++ +.||||+|||||.|+.|.+.
T Consensus 12 L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~-----~~vdeS~LTGEs~pv~k~~g 86 (124)
T 2kij_A 12 LISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH-----SMVDESLITGEAMPVAKKPG 86 (124)
T ss_dssp HHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCC-----CEEECTTTTCCSSCEECCTT
T ss_pred HhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEcc-----EEEEeccccCCCccEEeCCC
Confidence 4456789999999764 789999999999999999999999999999987 58999999999999999886
Q ss_pred ccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceee
Q 001335 209 ERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM 285 (1097)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~ 285 (1097)
+ .+|+|+++.+|. +.+.|+.||.+|.+.+
T Consensus 87 ~---------------------------~v~aGt~~~~G~---------------------~~~~v~~~g~~T~~~~ 115 (124)
T 2kij_A 87 S---------------------------TVIAGSINQNGS---------------------LLICATHVGADTTLSQ 115 (124)
T ss_dssp E---------------------------EECTTCEEESSC---------------------CEEEECSCTTTCHHHH
T ss_pred C---------------------------EEEcCCEEeeeE---------------------EEEEEEEecccCHHHH
Confidence 5 778888888887 9999999999997643
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-18 Score=174.71 Aligned_cols=140 Identities=18% Similarity=0.187 Sum_probs=107.1
Q ss_pred HHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecC
Q 001335 506 EFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEF 585 (1097)
Q Consensus 506 ~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F 585 (1097)
+.++..++|..... ..++|+|.|+++++...+..- ....|+++..+||
T Consensus 17 ~vl~~a~L~s~~~~-----------~~~n~~d~Ail~~~~~~~~~~---------------------~~~~~~~~~eiPF 64 (170)
T 3gwi_A 17 RVLHSAWLNSHYQT-----------GLKNLLDTAVLEGTDEESARS---------------------LASRWQKIDEIPF 64 (170)
T ss_dssp HHHHHHHHHHHHCC-----------SCCCHHHHHHHHTSCHHHHHH---------------------HHHHSEEEEEECC
T ss_pred HHHHHHHHcCCCCC-----------CCCChHHHHHHHHHHhcChhh---------------------hhhcCeEEeeEec
Confidence 45566666654321 136999999999875432100 1345888999999
Q ss_pred CCCCceEEEEEEecCCcEEEEEecchhHHHHHhhc---------CchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHH
Q 001335 586 NSTRKRQSVVCRYADGRLVLYCKGADSVIYERLAN---------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMY 656 (1097)
Q Consensus 586 ~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~ 656 (1097)
+|+|||||++++.++|++++++|||||.|+++|+. .+.+.++.+.+.+++|+.+|+|||++|||+++..+.
T Consensus 65 ds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~ 144 (170)
T 3gwi_A 65 DFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREG 144 (170)
T ss_dssp CTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSS
T ss_pred CcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcc
Confidence 99999999999987888999999999999999974 234567789999999999999999999999875421
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccc
Q 001335 657 ERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDK 699 (1097)
Q Consensus 657 ~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~ 699 (1097)
. .....|+||+|+|++|+-|.
T Consensus 145 ~----------------------~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 145 D----------------------YQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp C----------------------CCGGGSCSEEEEEEEEEEC-
T ss_pred c----------------------cCccccCCcEEEehhccccc
Confidence 0 01235899999999999875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.43 E-value=6.3e-14 Score=156.11 Aligned_cols=140 Identities=13% Similarity=0.114 Sum_probs=101.3
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHH
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVK 776 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1097)
.++++|+++++++.|+++|+++.|+|||...++.++++++|+...+...+......
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~------------------------ 194 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDF------------------------ 194 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEE------------------------
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEE------------------------
Confidence 57999999999999999999999999999999999999999976543222110000
Q ss_pred HHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEE
Q 001335 777 RELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLS 856 (1097)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vla 856 (1097)
........+.+... ..+++..|.+|...+..+++ .++.|+|
T Consensus 195 -----------------~~~~~~~~~~~~~i---------------------~~~~k~~~~~k~~~~~~~~~-~~~~v~~ 235 (297)
T 4fe3_A 195 -----------------DENGVLKGFKGELI---------------------HVFNKHDGALKNTDYFSQLK-DNSNIIL 235 (297)
T ss_dssp -----------------CTTSBEEEECSSCC---------------------CTTCHHHHHHTCHHHHHHTT-TCCEEEE
T ss_pred -----------------cccceeEecccccc---------------------chhhcccHHHHHHHHHHhhc-cCCEEEE
Confidence 00011111122111 14566678888888877877 6788999
Q ss_pred ecCCCCChhhhh---hcCeeEEec--C----ccchhhhhhcceeccchHhHH
Q 001335 857 IGDGANDVSMIQ---AAHIGVGIS--G----QEGMQAVMASDFAIAQFRFLT 899 (1097)
Q Consensus 857 iGDG~ND~~ml~---~AdvGIam~--g----~e~~~a~~~AD~vi~~~~~l~ 899 (1097)
+|||+||++|++ .||+||+|+ + +....++++||+||.++++..
T Consensus 236 vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~ 287 (297)
T 4fe3_A 236 LGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 287 (297)
T ss_dssp EESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCH
T ss_pred EeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChH
Confidence 999999999955 999999984 1 122236899999999988843
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.7e-10 Score=116.47 Aligned_cols=137 Identities=14% Similarity=0.101 Sum_probs=102.7
Q ss_pred eEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHH
Q 001335 689 TLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIA 768 (1097)
Q Consensus 689 ~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 768 (1097)
..++...++|.+ +|+.|+++|+++.|+||+....+..+++.+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 345555555544 9999999999999999999999999999999832
Q ss_pred HHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHc
Q 001335 769 RFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKK 848 (1097)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~ 848 (1097)
+|.. +..|...++.+.+
T Consensus 88 -------------------------------------------------------------~f~~--~~~K~~~~~~~~~ 104 (189)
T 3mn1_A 88 -------------------------------------------------------------LFQG--REDKLVVLDKLLA 104 (189)
T ss_dssp -------------------------------------------------------------EECS--CSCHHHHHHHHHH
T ss_pred -------------------------------------------------------------HhcC--cCChHHHHHHHHH
Confidence 1111 1556666666554
Q ss_pred c---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc------hHhHHHHHHhhhhhhHHHHhHHHHH
Q 001335 849 G---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ------FRFLTDLLLVHGRWSYLRICKVVLY 919 (1097)
Q Consensus 849 ~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~------~~~l~~lll~~Gr~~~~~i~~~i~~ 919 (1097)
. ..+.++++||+.||++|++.|++|+++.+... .++..||+++.+ .+.+..+ +...|..++++.+.+.|
T Consensus 105 ~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~ 182 (189)
T 3mn1_A 105 ELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAAS-FVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLE 182 (189)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTST
T ss_pred HcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhc
Confidence 3 24679999999999999999999999954332 378899999987 3445555 55678899999999988
Q ss_pred HHHHH
Q 001335 920 FFYKN 924 (1097)
Q Consensus 920 ~~~~n 924 (1097)
.+.+|
T Consensus 183 ~~~~~ 187 (189)
T 3mn1_A 183 GHHHH 187 (189)
T ss_dssp TC---
T ss_pred ccccc
Confidence 87665
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.96 E-value=9.2e-10 Score=121.80 Aligned_cols=81 Identities=19% Similarity=0.269 Sum_probs=57.0
Q ss_pred EeCcc--cHHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH------hHHHH
Q 001335 833 RVSPL--QKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR------FLTDL 901 (1097)
Q Consensus 833 r~sP~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~------~l~~l 901 (1097)
...|. .|+..++.+.+.. ...|++|||+.||++|++.|++||+|.++... ++..||+++.+.+ .+.++
T Consensus 195 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~s~~edGv~~~i~~~ 273 (290)
T 3dnp_A 195 NIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPE-IKRKADWVTRSNDEQGVAYMMKEY 273 (290)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHSSEECCCTTTTHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHH-HHHhcCEECCCCCccHHHHHHHHH
Confidence 44553 4998888887653 35699999999999999999999999655443 8999999987533 25666
Q ss_pred HHhhhhhhHHHHh
Q 001335 902 LLVHGRWSYLRIC 914 (1097)
Q Consensus 902 ll~~Gr~~~~~i~ 914 (1097)
+...+++-|.+-.
T Consensus 274 ~~~~~~~~~~~~~ 286 (290)
T 3dnp_A 274 FRMQQRKGFLDKF 286 (290)
T ss_dssp HHHHHHC------
T ss_pred HHhcCcccHHhHh
Confidence 6666666665443
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.94 E-value=6.8e-10 Score=122.11 Aligned_cols=78 Identities=27% Similarity=0.398 Sum_probs=54.6
Q ss_pred EEEeCcc--cHHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH------hHH
Q 001335 831 CCRVSPL--QKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR------FLT 899 (1097)
Q Consensus 831 ~~r~sP~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~------~l~ 899 (1097)
+.+..|. .|...++.+.+.. ...|++|||+.||++|++.|++||+|+++.. .++.+||+++.+.+ .+.
T Consensus 188 ~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~-~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 4dw8_A 188 FLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQE-PVKKAADYITLTNDEDGVAEAIE 266 (279)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcH-HHHHhCCEEcCCCCCcHHHHHHH
Confidence 3456666 5898888877643 3569999999999999999999999955443 38899999987633 266
Q ss_pred HHHHhhhhhh
Q 001335 900 DLLLVHGRWS 909 (1097)
Q Consensus 900 ~lll~~Gr~~ 909 (1097)
+++..+|+..
T Consensus 267 ~~~~~~~~~~ 276 (279)
T 4dw8_A 267 RIFNVEGHHH 276 (279)
T ss_dssp HHC-------
T ss_pred HHHhcccccc
Confidence 6667777653
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.89 E-value=2.4e-09 Score=117.98 Aligned_cols=190 Identities=15% Similarity=0.128 Sum_probs=106.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcc-----cCCChHHHHHHhHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVE-----ERGDPVEIARFMRE 773 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~-----~~~~~~~~~~~~~~ 773 (1097)
.+-+.+.++|++++++|++++++|||....+..+...+++. ...++.++..+.... ...+.....+.+ +
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~-----~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~-~ 112 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHK-----LLYITDGGTVVRTPKEILKTYPMDEDIWKGMC-R 112 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGG-----CEEEETTTTEEECSSCEEEECCCCHHHHHHHH-H
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-----cEEEECCCcEEEECCEEEEEecCCHHHHHHHH-H
Confidence 57788999999999999999999999999999998887752 235555655443210 011111111111 1
Q ss_pred HHHHH----------------------HHHHHHh-hhhcc------c-cc-CCCeEEEEE-cCccchhhcChhHHHHHHh
Q 001335 774 EVKRE----------------------LNKCIDE-AQQYI------H-SI-SGEKLALII-DGKCLMYALDPSLRVILLN 821 (1097)
Q Consensus 774 ~~~~~----------------------~~~~~~~-~~~~~------~-~~-~~~~~~lvi-~G~~l~~~l~~~l~~~f~~ 821 (1097)
...+. ....... ..... . .. .......+. +...... +.+.+.+.+..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~-~~~~l~~~~~~ 191 (283)
T 3dao_A 113 MVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEEL-CTPVFIPAWNK 191 (283)
T ss_dssp HHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHH-HTTTHHHHHTT
T ss_pred HHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHH-HHHHHHHHhcC
Confidence 11100 0000000 00000 0 00 011111122 2222211 12234344432
Q ss_pred -hhccCCceEEEEeCccc--HHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccch
Q 001335 822 -LSLNCSSVVCCRVSPLQ--KAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQF 895 (1097)
Q Consensus 822 -l~~~~~~vi~~r~sP~q--K~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~ 895 (1097)
+........+.+..|.. |+..++.+.+..| ..|++|||+.||++|++.|++||+|+++... +|..||++..+.
T Consensus 192 ~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~-~k~~A~~v~~s~ 270 (283)
T 3dao_A 192 KAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQE-VIAAAKHTCAPY 270 (283)
T ss_dssp TEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHH-HHHHSSEEECCG
T ss_pred CEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHH-HHHhcCeECCCC
Confidence 11111122344566654 9999888876533 5699999999999999999999999655443 899999998754
Q ss_pred H
Q 001335 896 R 896 (1097)
Q Consensus 896 ~ 896 (1097)
+
T Consensus 271 ~ 271 (283)
T 3dao_A 271 W 271 (283)
T ss_dssp G
T ss_pred C
Confidence 3
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.87 E-value=1.5e-09 Score=119.24 Aligned_cols=204 Identities=15% Similarity=0.124 Sum_probs=99.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
.+.+.+.++|++++++|++++++||+....+..+...+|+..+. ...++.++. +....... ......+..+...+
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~--~~~i~~nGa-i~~~~~~~--~~~~~~~~~~~~~~ 96 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDD--QYAITFNGS-VAQTISGK--VLTNHSLTYEDYID 96 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSS--CEEEEGGGT-EEEETTSC--EEEECCCCHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC--CEEEEcCcE-EEECCCCC--EEEecCCCHHHHHH
Confidence 46778899999999999999999999999999999999985432 234555554 22110000 00000011111111
Q ss_pred HHHHHHhhhhccccc-------------------------------------CCCeEEEEEcCcc-chhhcChhHHHHHH
Q 001335 779 LNKCIDEAQQYIHSI-------------------------------------SGEKLALIIDGKC-LMYALDPSLRVILL 820 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~-------------------------------------~~~~~~lvi~G~~-l~~~l~~~l~~~f~ 820 (1097)
+.+...+........ ......+.+.+.. ....+.+.+.+.+.
T Consensus 97 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~ 176 (279)
T 3mpo_A 97 LEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFK 176 (279)
T ss_dssp HHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhC
Confidence 111111110000000 0000011111110 00000011111111
Q ss_pred h-hhccCCceEEEEeCccc--HHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 821 N-LSLNCSSVVCCRVSPLQ--KAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 821 ~-l~~~~~~vi~~r~sP~q--K~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
. +........+.+..|.. |...++.+.+..| ..+++|||+.||++|++.|++||+|+++... +|.+||++..+
T Consensus 177 ~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~ 255 (279)
T 3mpo_A 177 DRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDE-VKEAAQAVTLT 255 (279)
T ss_dssp HHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCH-HHHHCSCBC--
T ss_pred CCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHH-HHHhcceeccC
Confidence 1 22222223345666654 9998888776533 5699999999999999999999999554433 89999999865
Q ss_pred hHh------HHHHHHhhhhh
Q 001335 895 FRF------LTDLLLVHGRW 908 (1097)
Q Consensus 895 ~~~------l~~lll~~Gr~ 908 (1097)
.+- +.++++-+|+.
T Consensus 256 ~~e~Gv~~~i~~~~~~~~~~ 275 (279)
T 3mpo_A 256 NAENGVAAAIRKYALNEGHH 275 (279)
T ss_dssp ----CHHHHHC---------
T ss_pred CCccHHHHHHHHHhcccCcc
Confidence 332 55555666654
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.85 E-value=4.4e-09 Score=111.74 Aligned_cols=180 Identities=13% Similarity=0.102 Sum_probs=102.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHH-HHHHhHHHH
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE-IARFMREEV 775 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 775 (1097)
..++.+++.++|++|+++|++++++|||....+..+++++|+.. ..++.++..+.+.. +. .. ....+ +.
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~-----~~I~~NGa~i~~~~--~~-~i~~~~~l--~~ 89 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING-----PVFGENGGIMFDND--GS-IKKFFSNE--GT 89 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS-----CEEEGGGTEEECTT--SC-EEESSCSH--HH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC-----eEEEeCCcEEEeCC--CC-EEEEeccH--HH
Confidence 34678899999999999999999999999999999999998742 14555555443210 00 00 00111 11
Q ss_pred HHHHHHHHHhhhh----cccccCCCeEEEEEcCccchhhcChhHHHHHHh---hhccCCceEEEEeCc--ccHHHHHHHH
Q 001335 776 KRELNKCIDEAQQ----YIHSISGEKLALIIDGKCLMYALDPSLRVILLN---LSLNCSSVVCCRVSP--LQKAQVTSLV 846 (1097)
Q Consensus 776 ~~~~~~~~~~~~~----~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~---l~~~~~~vi~~r~sP--~qK~~iv~~l 846 (1097)
..++ +...+.-. +........+.. + +. ..+.+..+.+.. +... ...-+.++.| ..|...++.+
T Consensus 90 ~~~i-~~~~~~~~~~~~~~~~~~~~~~~~-~----~~-~~~~~~~~~~~~~~~~~~~-~~~~~~ei~~~~~~K~~~l~~l 161 (227)
T 1l6r_A 90 NKFL-EEMSKRTSMRSILTNRWREASTGF-D----ID-PEDVDYVRKEAESRGFVIF-YSGYSWHLMNRGEDKAFAVNKL 161 (227)
T ss_dssp HHHH-HHHTTTSSCBCCGGGGGCSSSEEE-B----CC-GGGHHHHHHHHHTTTEEEE-EETTEEEEEETTCSHHHHHHHH
T ss_pred HHHH-HHHHHHhcCCccccccceecccce-E----Ee-cCCHHHHHHHHHhcCEEEE-ecCcEEEEecCCCCHHHHHHHH
Confidence 1222 11111000 000000000000 0 00 001111111111 1111 1112345567 5699998888
Q ss_pred Hccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccch
Q 001335 847 KKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQF 895 (1097)
Q Consensus 847 k~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~ 895 (1097)
.+.. ...++++||+.||++|++.|++||+|.+... .++..||+++.+.
T Consensus 162 ~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~-~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 162 KEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD-NIKAVSDFVSDYS 212 (227)
T ss_dssp HHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCH-HHHHHCSEECSCC
T ss_pred HHHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCchH-HHHHhCCEEecCC
Confidence 7642 3579999999999999999999999954433 3788999998764
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.82 E-value=2.2e-09 Score=118.50 Aligned_cols=184 Identities=15% Similarity=0.170 Sum_probs=101.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
..+-+.+.++|++++++|++++++|||....+..+.+.+|+- ...+..++..+.+.... ......+..+...
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~-----~~~I~~nGa~i~~~~~~---~l~~~~l~~~~~~ 108 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIR-----SYMITSNGARVHDSDGQ---QIFAHNLDRDIAA 108 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSC-----CEEEEGGGTEEECTTSC---EEEECCCCHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCC-----ccEEEcCCeEEECCCCC---EEEecCCCHHHHH
Confidence 357778999999999999999999999999999999999874 24555555544321100 0000011111111
Q ss_pred HHHH-HHHhhhhccccc----------------------------------CCCe-EEEEEcCcc-chhhcChhHHHHHH
Q 001335 778 ELNK-CIDEAQQYIHSI----------------------------------SGEK-LALIIDGKC-LMYALDPSLRVILL 820 (1097)
Q Consensus 778 ~~~~-~~~~~~~~~~~~----------------------------------~~~~-~~lvi~G~~-l~~~l~~~l~~~f~ 820 (1097)
++.+ ............ ...- ..++.++.. ....+.+.+.+.+.
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~ 188 (285)
T 3pgv_A 109 DLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWG 188 (285)
T ss_dssp HHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 1111 000000000000 0000 111111110 00001112222222
Q ss_pred h-hhccCCceEEEEeCcc--cHHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcce
Q 001335 821 N-LSLNCSSVVCCRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDF 890 (1097)
Q Consensus 821 ~-l~~~~~~vi~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~ 890 (1097)
. +........+.++.|. .|+..++.+.+..| +.+++|||+.||++|++.|++||+|+++... +|.+||+
T Consensus 189 ~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~-vk~~A~~ 263 (285)
T 3pgv_A 189 DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQR-LKDLHPE 263 (285)
T ss_dssp GGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCTT
T ss_pred CCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHH-HHHhCCC
Confidence 1 1111122234556664 49998888876533 5799999999999999999999999655443 8899985
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=1.3e-08 Score=103.90 Aligned_cols=129 Identities=16% Similarity=0.098 Sum_probs=91.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHH
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKREL 779 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1097)
+.+++.++|+.|+++|++++++||+....+..+++.+|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 44567799999999999999999999999999999998832
Q ss_pred HHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHccc---CceEEE
Q 001335 780 NKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA---RKITLS 856 (1097)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~---~~~vla 856 (1097)
.+.. ...|...++.+.+.. .+.+++
T Consensus 77 --------------------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~ 104 (180)
T 1k1e_A 77 --------------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAY 104 (180)
T ss_dssp --------------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------------------------------------eecC--CCCcHHHHHHHHHHcCCCHHHEEE
Confidence 1100 134555555444322 367999
Q ss_pred ecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH------hHHHHHHhhhhhhHHHHhHHHHHHH
Q 001335 857 IGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR------FLTDLLLVHGRWSYLRICKVVLYFF 921 (1097)
Q Consensus 857 iGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~------~l~~lll~~Gr~~~~~i~~~i~~~~ 921 (1097)
|||+.||++|++.|++++++.+... .++..||+++.+.. .+.+. +...|..++++...+.|.+
T Consensus 105 vGD~~~Di~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~ 173 (180)
T 1k1e_A 105 IGDDSVDLPAFAACGTSFAVADAPI-YVKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFLK 173 (180)
T ss_dssp EECSGGGHHHHHHSSEEEECTTSCH-HHHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHHH
T ss_pred ECCCHHHHHHHHHcCCeEEeCCccH-HHHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchhh
Confidence 9999999999999999999954332 36788999988742 22222 2334555666665555543
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.76 E-value=9.9e-09 Score=116.05 Aligned_cols=150 Identities=19% Similarity=0.182 Sum_probs=94.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|+++|+++.|+||+....+..+++.+|+...-...+.+. ++
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~-d~-------------------------- 230 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIV-SG-------------------------- 230 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEE-TT--------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEee-CC--------------------------
Confidence 689999999999999999999999999999999999999843111111110 00
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEE-eCcccHHHHHHHHHcc---cCceE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR-VSPLQKAQVTSLVKKG---ARKIT 854 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r-~sP~qK~~iv~~lk~~---~~~~v 854 (1097)
.++|. +... ..++.|...++.+.+. ....+
T Consensus 231 ----------------------~~tg~------------------------~~~~~~~~kpk~~~~~~~~~~lgi~~~~~ 264 (335)
T 3n28_A 231 ----------------------KLTGQ------------------------VLGEVVSAQTKADILLTLAQQYDVEIHNT 264 (335)
T ss_dssp ----------------------EEEEE------------------------EESCCCCHHHHHHHHHHHHHHHTCCGGGE
T ss_pred ----------------------eeeee------------------------ecccccChhhhHHHHHHHHHHcCCChhhE
Confidence 00000 0000 1133455555544432 34679
Q ss_pred EEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh--HHHHHHhhhhhhHHHHhHHHHHHHHHH
Q 001335 855 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF--LTDLLLVHGRWSYLRICKVVLYFFYKN 924 (1097)
Q Consensus 855 laiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~~n 924 (1097)
+|+|||.||++|++.||+||+|.+.+. ++..||+++...++ +..+ +......-.|++.++.+.+.+|
T Consensus 265 v~vGDs~nDi~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 265 VAVGDGANDLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp EEEECSGGGHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC--------
T ss_pred EEEeCCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhccccccccccc
Confidence 999999999999999999999944444 78899999865444 2222 3333344457777777776655
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.3e-08 Score=109.02 Aligned_cols=178 Identities=10% Similarity=0.011 Sum_probs=100.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChH---HHHHHhHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPV---EIARFMREEV 775 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 775 (1097)
.+.+.+.++|++|+++| +++++|||....+..+...+ ...++.++..+.. ....... .....+..+.
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l--------~~~I~~nGa~i~~-~~~~~~~~~~~~~~~l~~~~ 92 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD--------INMICYHGACSKI-NGQIVYNNGSDRFLGVFDRI 92 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS--------CEEEEGGGTEEEE-TTEEEECTTGGGGHHHHHHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc--------hheEEECCEEEee-CCeeeecccccccchhhHHH
Confidence 46678999999999999 99999999999998887654 1355666665543 1100000 1222333333
Q ss_pred HHHHHHHHHhhhhcccccCCCeEEEEEcC-ccchhhcChhHHHHHHh---hhccCCceEEEEeCcc--cHHHHHHHHHcc
Q 001335 776 KRELNKCIDEAQQYIHSISGEKLALIIDG-KCLMYALDPSLRVILLN---LSLNCSSVVCCRVSPL--QKAQVTSLVKKG 849 (1097)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G-~~l~~~l~~~l~~~f~~---l~~~~~~vi~~r~sP~--qK~~iv~~lk~~ 849 (1097)
..++..................+...... ..+..-..+.+.+.+.. +.. ....-+.++.|. .|+..++.+.+.
T Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~lei~~~~~~Kg~al~~l~~~ 171 (239)
T 1u02_A 93 YEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVET-YYGKMIIELRVPGVNKGSAIRSVRGE 171 (239)
T ss_dssp HHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEE-EECSSEEEEECTTCCHHHHHHHHHTT
T ss_pred HHHHHHHHhhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEE-EeCCcEEEEEcCCCCHHHHHHHHHhh
Confidence 33333322222110000001111111000 00000000011111111 111 111234566676 599999999886
Q ss_pred cCceEEEecCCCCChhhhhhc--CeeEEecCccchhhhhhcceeccc
Q 001335 850 ARKITLSIGDGANDVSMIQAA--HIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 850 ~~~~vlaiGDG~ND~~ml~~A--dvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
.+ |+++||+.||++||+.| ++||+|.++ +..||+++.+
T Consensus 172 ~g--via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 172 RP--AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp SC--EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred CC--eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 66 99999999999999999 999999664 5689998866
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.73 E-value=2.6e-08 Score=104.13 Aligned_cols=108 Identities=12% Similarity=0.118 Sum_probs=83.1
Q ss_pred EEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHH
Q 001335 690 LIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIAR 769 (1097)
Q Consensus 690 llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 769 (1097)
.+....+.|.+ +|+.|+++|+++.|+||+....+..+++.+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34445555554 9999999999999999999999999999999832
Q ss_pred HhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc
Q 001335 770 FMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG 849 (1097)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~ 849 (1097)
++... +.|...++.+.+.
T Consensus 118 ------------------------------------------------------------~f~~~--k~K~~~l~~~~~~ 135 (211)
T 3ij5_A 118 ------------------------------------------------------------LYQGQ--SDKLVAYHELLAT 135 (211)
T ss_dssp ------------------------------------------------------------EECSC--SSHHHHHHHHHHH
T ss_pred ------------------------------------------------------------hhccc--CChHHHHHHHHHH
Confidence 11111 4566666666543
Q ss_pred ---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccch
Q 001335 850 ---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQF 895 (1097)
Q Consensus 850 ---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~ 895 (1097)
....++++||+.||++|++.|++++++.+... .++..||+++.+.
T Consensus 136 lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~-~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 136 LQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHP-LLLPKAHYVTRIK 183 (211)
T ss_dssp HTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCT-TTGGGSSEECSSC
T ss_pred cCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccH-HHHhhCCEEEeCC
Confidence 24679999999999999999999999954433 2788999998764
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.72 E-value=2.8e-08 Score=99.74 Aligned_cols=107 Identities=15% Similarity=0.122 Sum_probs=80.7
Q ss_pred CceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHH--HcCCccCCCeEEEEecCCccchhcccCCCh
Q 001335 687 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAY--ACNLINNEMKQFIITSETNAIRDVEERGDP 764 (1097)
Q Consensus 687 ~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~--~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~ 764 (1097)
+-..++.+.++|.. +|+.|+++|+++.|+||+ ..+..+++ .+|+.
T Consensus 30 ~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 34567777777773 899999999999999999 67777887 44441
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHH
Q 001335 765 VEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTS 844 (1097)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~ 844 (1097)
++ ..++.|...++
T Consensus 77 -----------------------------------------------------------------~~--~g~~~K~~~l~ 89 (168)
T 3ewi_A 77 -----------------------------------------------------------------TE--VSVSDKLATVD 89 (168)
T ss_dssp -----------------------------------------------------------------EE--CSCSCHHHHHH
T ss_pred -----------------------------------------------------------------EE--ECCCChHHHHH
Confidence 00 11345777766
Q ss_pred HHHcc---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 845 LVKKG---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 845 ~lk~~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
.+.+. ....++++||+.||++|++.|+++++|.+... .++..||+++..
T Consensus 90 ~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~-~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 90 EWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACS-GAQKAVGYICKC 141 (168)
T ss_dssp HHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCH-HHHTTCSEECSS
T ss_pred HHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhH-HHHHhCCEEeCC
Confidence 66543 23679999999999999999999999954433 389999999875
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.72 E-value=1.2e-08 Score=105.35 Aligned_cols=97 Identities=19% Similarity=0.159 Sum_probs=75.8
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhh
Q 001335 707 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEA 786 (1097)
Q Consensus 707 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1097)
.|+.|+++|+++.|+||+....+..+++++|+..
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------------------------- 93 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------------------------- 93 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE----------------------------------------------
Confidence 4999999999999999999999999999999842
Q ss_pred hhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEEEecCCCCC
Q 001335 787 QQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITLSIGDGAND 863 (1097)
Q Consensus 787 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND 863 (1097)
++... +.|...++.+.+. ....+++|||+.||
T Consensus 94 -------------------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nD 128 (195)
T 3n07_A 94 -------------------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLID 128 (195)
T ss_dssp -------------------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGG
T ss_pred -------------------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHH
Confidence 11111 4455555555432 34679999999999
Q ss_pred hhhhhhcCeeEEecCccchhhhhhcceeccch
Q 001335 864 VSMIQAAHIGVGISGQEGMQAVMASDFAIAQF 895 (1097)
Q Consensus 864 ~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~ 895 (1097)
++|++.|+++++|.+... .++..||+++...
T Consensus 129 i~~~~~ag~~va~~na~~-~~~~~ad~v~~~~ 159 (195)
T 3n07_A 129 WPVMEKVALRVCVADGHP-LLAQRANYVTHIK 159 (195)
T ss_dssp HHHHTTSSEEEECTTSCH-HHHHHCSEECSSC
T ss_pred HHHHHHCCCEEEECChHH-HHHHhCCEEEcCC
Confidence 999999999999955433 3789999998763
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.70 E-value=4.7e-08 Score=99.31 Aligned_cols=116 Identities=15% Similarity=0.116 Sum_probs=85.9
Q ss_pred EEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHH
Q 001335 690 LIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIAR 769 (1097)
Q Consensus 690 llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 769 (1097)
.+....+.|.+ +|+.|+++|+++.++||+....+..+++.+|+.
T Consensus 36 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------------------------ 79 (176)
T 3mmz_A 36 EFVSVHRGDGL------GIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------------------------ 79 (176)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC------------------------------
T ss_pred HhHhcccccHH------HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe------------------------------
Confidence 34444445444 899999999999999999999999999999873
Q ss_pred HhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc
Q 001335 770 FMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG 849 (1097)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~ 849 (1097)
++.. .+.|...++.+.+.
T Consensus 80 ------------------------------------------------------------~~~~--~~~k~~~l~~~~~~ 97 (176)
T 3mmz_A 80 ------------------------------------------------------------VLHG--IDRKDLALKQWCEE 97 (176)
T ss_dssp ------------------------------------------------------------EEES--CSCHHHHHHHHHHH
T ss_pred ------------------------------------------------------------eEeC--CCChHHHHHHHHHH
Confidence 0000 14466666555543
Q ss_pred c---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc------hHhHHHHHHh
Q 001335 850 A---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ------FRFLTDLLLV 904 (1097)
Q Consensus 850 ~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~------~~~l~~lll~ 904 (1097)
. .+.++++||+.||++|++.|++|+++.+... .++..||+++.+ .+.+..+++.
T Consensus 98 ~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~l~~ 160 (176)
T 3mmz_A 98 QGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHD-VVRGAARAVTTVPGGDGAIREIASWILG 160 (176)
T ss_dssp HTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred cCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhH-HHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 2 3679999999999999999999999954332 378899999987 5556665443
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.69 E-value=1e-08 Score=114.25 Aligned_cols=65 Identities=15% Similarity=0.213 Sum_probs=50.8
Q ss_pred EEEeCcc--cHHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 831 CCRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 831 ~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
+.+..|. .|+..++.+.+..| ..+++|||+.||++|++.|++||+|.++... +|.+||+++.+.+
T Consensus 219 ~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~~~~ 288 (304)
T 3l7y_A 219 YIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKN-VKAAANYQAKSND 288 (304)
T ss_dssp EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHH-HHHHCSEECCCGG
T ss_pred eEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHH-HHHhccEEcCCCC
Confidence 3445554 59988888876433 5699999999999999999999999655443 8999999987643
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.67 E-value=3.5e-08 Score=107.01 Aligned_cols=58 Identities=22% Similarity=0.365 Sum_probs=46.4
Q ss_pred cHHHHHHHHHcc---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 838 QKAQVTSLVKKG---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 838 qK~~iv~~lk~~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
.|+..++.+.+. ....|+++||+.||++|++.|++||+|.++. ..+|..||++..+.+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~-~~~k~~A~~v~~~~~ 243 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAH-EEVKRVADFVTKPVD 243 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCC-HHHHHTCSEEECCGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCc-HHHHHhCCEEeCCCC
Confidence 388888877764 2356999999999999999999999995433 348899999986543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.64 E-value=2.3e-08 Score=107.87 Aligned_cols=64 Identities=14% Similarity=0.093 Sum_probs=49.1
Q ss_pred EEeCc-ccHHHHHHHHHcc----cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccch
Q 001335 832 CRVSP-LQKAQVTSLVKKG----ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQF 895 (1097)
Q Consensus 832 ~r~sP-~qK~~iv~~lk~~----~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~ 895 (1097)
..+.| ..|+..++.+.+. ....|++|||+.||++||+.|++||+|+++.....+..||+++.+.
T Consensus 172 ~ei~~g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~~ 240 (249)
T 2zos_A 172 YTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVLE 240 (249)
T ss_dssp EEEECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHHH
T ss_pred EEEeCCCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEeccc
Confidence 45566 2399988888764 2357999999999999999999999996654233667889877653
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.63 E-value=4.2e-08 Score=101.11 Aligned_cols=116 Identities=17% Similarity=0.176 Sum_probs=82.4
Q ss_pred HHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhh
Q 001335 708 IETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQ 787 (1097)
Q Consensus 708 I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1097)
|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999999842
Q ss_pred hcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeC--cccHHHHHHHHHcccCceEEEecCCCCChh
Q 001335 788 QYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVS--PLQKAQVTSLVKKGARKITLSIGDGANDVS 865 (1097)
Q Consensus 788 ~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~s--P~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ 865 (1097)
++.... |+-...+++.+.- ....+++|||+.||++
T Consensus 88 ------------------------------------------~~~~~kpk~~~~~~~~~~~~~-~~~~~~~vGD~~~Di~ 124 (191)
T 3n1u_A 88 ------------------------------------------YYKGQVDKRSAYQHLKKTLGL-NDDEFAYIGDDLPDLP 124 (191)
T ss_dssp ------------------------------------------EECSCSSCHHHHHHHHHHHTC-CGGGEEEEECSGGGHH
T ss_pred ------------------------------------------ceeCCCChHHHHHHHHHHhCC-CHHHEEEECCCHHHHH
Confidence 111111 2222333333332 3567999999999999
Q ss_pred hhhhcCeeEEecCccchhhhhhcceeccc------hHhHHHHHHhhhhhhHHHHhH
Q 001335 866 MIQAAHIGVGISGQEGMQAVMASDFAIAQ------FRFLTDLLLVHGRWSYLRICK 915 (1097)
Q Consensus 866 ml~~AdvGIam~g~e~~~a~~~AD~vi~~------~~~l~~lll~~Gr~~~~~i~~ 915 (1097)
|++.|++++++.+... .++..||+++.+ .+.+..+ +...|..+.++..
T Consensus 125 ~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~~~ 178 (191)
T 3n1u_A 125 LIQQVGLGVAVSNAVP-QVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAELAIT 178 (191)
T ss_dssp HHHHSSEEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHH
T ss_pred HHHHCCCEEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHHHH
Confidence 9999999999954432 378899999987 3335554 3445555555443
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.62 E-value=3.9e-08 Score=108.23 Aligned_cols=192 Identities=14% Similarity=0.159 Sum_probs=102.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++-+.+.++|++|+++|++++++|||....+..+.+++++.... ...++.++..+.+.... .......+..+...+
T Consensus 22 ~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~--~~~I~~NGa~i~~~~~~--~~i~~~~l~~~~~~~ 97 (282)
T 1rkq_A 22 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPG--DYCITYNGALVQKAADG--STVAQTALSYDDYRF 97 (282)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTT--CEEEEGGGTEEEETTTC--CEEEECCBCHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCC--CeEEEeCCeEEEECCCC--eEEEEecCCHHHHHH
Confidence 46678999999999999999999999999999999999874321 23455666554331000 000001111111222
Q ss_pred HHHHHHhhhhcccccCCCeE-------------------------------------EEEEcCcc-chhhcChhHHHHHH
Q 001335 779 LNKCIDEAQQYIHSISGEKL-------------------------------------ALIIDGKC-LMYALDPSLRVILL 820 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~-------------------------------------~lvi~G~~-l~~~l~~~l~~~f~ 820 (1097)
+.+...+.+........... .+.+-+.. ....+.+.+.+.+.
T Consensus 98 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~ 177 (282)
T 1rkq_A 98 LEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVK 177 (282)
T ss_dssp HHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCHHHHHHHHHHHHHHhc
Confidence 21111111100000000000 00000000 00000000111111
Q ss_pred -hhhccCCceEEEEeCcc--cHHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 821 -NLSLNCSSVVCCRVSPL--QKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 821 -~l~~~~~~vi~~r~sP~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
.+.......-+.++.|. .|...++.+.+.. ...++++||+.||++|++.|++||+|.+... .++..||+++.+
T Consensus 178 ~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~-~~~~~a~~v~~~ 256 (282)
T 1rkq_A 178 EKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIP-SVKEVANFVTKS 256 (282)
T ss_dssp HHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCC
T ss_pred CCEEEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcH-HHHhhCCEEecC
Confidence 11100011113466666 5999888887642 3569999999999999999999999955433 377889999865
Q ss_pred h
Q 001335 895 F 895 (1097)
Q Consensus 895 ~ 895 (1097)
.
T Consensus 257 ~ 257 (282)
T 1rkq_A 257 N 257 (282)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.60 E-value=5.6e-08 Score=106.20 Aligned_cols=63 Identities=19% Similarity=0.268 Sum_probs=49.1
Q ss_pred eCcc--cHHHHHHHHHcc---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh
Q 001335 834 VSPL--QKAQVTSLVKKG---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 834 ~sP~--qK~~iv~~lk~~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~ 897 (1097)
+.|. .|...++.+.+. ..+.+++|||+.||++|++.|++||+|+++.. +++..||+++.+.+-
T Consensus 194 i~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~-~~k~~A~~v~~~~~e 261 (274)
T 3fzq_A 194 IIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQ-QLKDIATSICEDIFD 261 (274)
T ss_dssp EEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCH-HHHHHCSEEECCGGG
T ss_pred EeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccH-HHHHhhhheeCCCch
Confidence 4444 488888877654 23569999999999999999999999955543 388999999876443
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.59 E-value=3.9e-08 Score=109.19 Aligned_cols=64 Identities=17% Similarity=0.254 Sum_probs=50.2
Q ss_pred EEEeCcc--cHHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceecc-ch
Q 001335 831 CCRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIA-QF 895 (1097)
Q Consensus 831 ~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~-~~ 895 (1097)
+.++.|. .|+..++.+.+..+ ..+++|||+.||++|++.|++||+|.++.. .++..||+++. +.
T Consensus 215 ~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~~ 284 (301)
T 2b30_A 215 HAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLPVSH 284 (301)
T ss_dssp CEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECSSCT
T ss_pred ceEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcH-HHHhhCCEEEccCC
Confidence 3455666 59999888876433 569999999999999999999999965443 37789999987 53
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.58 E-value=1.4e-08 Score=110.72 Aligned_cols=64 Identities=30% Similarity=0.388 Sum_probs=50.3
Q ss_pred EEeCcc--cHHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 832 CRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 832 ~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
.+..|. .|+..++.+.+..+ +.++++||+.||++|++.|++||+|.++... +|.+||++..+.+
T Consensus 186 ~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~~~~ 254 (268)
T 3r4c_A 186 ADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEK-VQSVADFVTDTVD 254 (268)
T ss_dssp EEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHTCSEECCCTT
T ss_pred EEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHH-HHHhcCEeeCCCC
Confidence 344554 59888888776533 5699999999999999999999999655443 8999999987643
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=1.4e-07 Score=94.44 Aligned_cols=110 Identities=18% Similarity=0.109 Sum_probs=81.0
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhh
Q 001335 707 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEA 786 (1097)
Q Consensus 707 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1097)
+++.|+++|+++.++||+....+..+++.+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999998842
Q ss_pred hhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEEEecCCCCC
Q 001335 787 QQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITLSIGDGAND 863 (1097)
Q Consensus 787 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND 863 (1097)
.+.. .+.|...++.+.+. ..+.+++|||+.||
T Consensus 73 -------------------------------------------~~~~--~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~D 107 (164)
T 3e8m_A 73 -------------------------------------------LFQG--VVDKLSAAEELCNELGINLEQVAYIGDDLND 107 (164)
T ss_dssp -------------------------------------------EECS--CSCHHHHHHHHHHHHTCCGGGEEEECCSGGG
T ss_pred -------------------------------------------eecc--cCChHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 1111 13344444444332 34679999999999
Q ss_pred hhhhhhcCeeEEecCccchhhhhhcceeccc------hHhHHHHHHhhhhhh
Q 001335 864 VSMIQAAHIGVGISGQEGMQAVMASDFAIAQ------FRFLTDLLLVHGRWS 909 (1097)
Q Consensus 864 ~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~------~~~l~~lll~~Gr~~ 909 (1097)
+.|.+.|++++++.+... .++..||+++.+ .+.+...++ +|+|.
T Consensus 108 i~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~~ 157 (164)
T 3e8m_A 108 AKLLKRVGIAGVPASAPF-YIRRLSTIFLEKRGGEGVFREFVEKVL-GINLE 157 (164)
T ss_dssp HHHHTTSSEEECCTTSCH-HHHTTCSSCCCCCTTTTHHHHHHHHHT-TCCHH
T ss_pred HHHHHHCCCeEEcCChHH-HHHHhCcEEeccCCCCcHHHHHHHHHH-ccCch
Confidence 999999999999943332 378899999987 334444444 66644
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.47 E-value=2e-07 Score=96.13 Aligned_cols=117 Identities=20% Similarity=0.279 Sum_probs=87.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.+.++.|++.|++++++||.....+..+ +.+|+... ...+...
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~----------------------------- 127 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFE----------------------------- 127 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEE-----------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEee-----------------------------
Confidence 7899999999999999999999999988887777 77776321 1111000
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
++ . .-.....|..|...++.+ ....+++||
T Consensus 128 ------------------------~~-~----------------------~~~~~~~~~~k~~~l~~l---~~~~~i~iG 157 (201)
T 4ap9_A 128 ------------------------DG-K----------------------FQGIRLRFRDKGEFLKRF---RDGFILAMG 157 (201)
T ss_dssp ------------------------TT-E----------------------EEEEECCSSCHHHHHGGG---TTSCEEEEE
T ss_pred ------------------------CC-c----------------------eECCcCCccCHHHHHHhc---CcCcEEEEe
Confidence 00 0 011345567798888877 346789999
Q ss_pred CCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhHHHH
Q 001335 859 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 859 DG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l~~l 901 (1097)
|+.||+.|++.|++||+|.+... .||+++.+.+-+..+
T Consensus 158 D~~~Di~~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 158 DGYADAKMFERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp CTTCCHHHHHHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred CCHHHHHHHHhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 99999999999999999955443 899999987776555
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.45 E-value=1.4e-07 Score=103.06 Aligned_cols=63 Identities=19% Similarity=0.202 Sum_probs=49.1
Q ss_pred EeCcc--cHHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 833 RVSPL--QKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 833 r~sP~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
+..|. .|...++.+.+.. ...++++||+.||++|++.|++||+|.++.. .++..||+++.+.+
T Consensus 184 ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~~ 251 (271)
T 1rlm_A 184 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAE-NIKQIARYATDDNN 251 (271)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred EEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccH-HHHHhCCeeCcCCC
Confidence 44444 5998888887643 3569999999999999999999999955443 37889999987643
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.44 E-value=1.5e-07 Score=102.66 Aligned_cols=63 Identities=19% Similarity=0.294 Sum_probs=49.1
Q ss_pred EEeCcc--cHHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccch
Q 001335 832 CRVSPL--QKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQF 895 (1097)
Q Consensus 832 ~r~sP~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~ 895 (1097)
.++.|. .|...++.+.+.. ...++++||+.||++|++.|++||+|.+... ..+..||+++.+.
T Consensus 182 ~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~~ 249 (268)
T 1nf2_A 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIE-KVKEASDIVTLTN 249 (268)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCH-HHHHHCSEECCCT
T ss_pred EEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCH-HHHhhCCEEEccC
Confidence 455665 5998888877642 3569999999999999999999999965433 3678899998753
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=4.5e-07 Score=93.10 Aligned_cols=110 Identities=15% Similarity=0.171 Sum_probs=80.0
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhh
Q 001335 707 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEA 786 (1097)
Q Consensus 707 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1097)
+|+.|+++|++++++||+....+..+++.+|+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------------------------- 94 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------------------------- 94 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce----------------------------------------------
Confidence 8999999999999999999999999999988731
Q ss_pred hhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEEEecCCCCC
Q 001335 787 QQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITLSIGDGAND 863 (1097)
Q Consensus 787 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND 863 (1097)
++.. .+.|...++.+.+. ....+++|||+.||
T Consensus 95 -------------------------------------------~~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~D 129 (188)
T 2r8e_A 95 -------------------------------------------LYQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLID 129 (188)
T ss_dssp -------------------------------------------EECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGG
T ss_pred -------------------------------------------eecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 1110 13344444444332 23579999999999
Q ss_pred hhhhhhcCeeEEecCccchhhhhhcceeccch-------HhHHHHHHhhhhh
Q 001335 864 VSMIQAAHIGVGISGQEGMQAVMASDFAIAQF-------RFLTDLLLVHGRW 908 (1097)
Q Consensus 864 ~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~-------~~l~~lll~~Gr~ 908 (1097)
+.|.+.|++++++.+.. ..++..||+++.+. .++..++-.+|+|
T Consensus 130 i~~a~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~g~~~~~l~~ll~~~~~~ 180 (188)
T 2r8e_A 130 WPVMEKVGLSVAVADAH-PLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKL 180 (188)
T ss_dssp HHHHTTSSEEEECTTSC-TTTGGGSSEECSSCTTTTHHHHHHHHHHHHTTCC
T ss_pred HHHHHHCCCEEEecCcC-HHHHhcCCEEEeCCCCCcHHHHHHHHHHHhcCcH
Confidence 99999999999984332 22677899999885 3345554555654
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.42 E-value=1.2e-06 Score=96.54 Aligned_cols=65 Identities=25% Similarity=0.239 Sum_probs=50.1
Q ss_pred EEEeCccc--HHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 831 CCRVSPLQ--KAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 831 ~~r~sP~q--K~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
+.++.|.. |+..++.+.+.. ...++++||+.||++|++.|++||+|.+... ..+..||+++.+..
T Consensus 207 ~lei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~-~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 207 NFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARE-DIKSIADAVTLTND 276 (288)
T ss_dssp EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred cEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCH-HHHhhCceeecCCC
Confidence 44555654 988888877643 3569999999999999999999999955433 37788999987643
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=4.8e-07 Score=94.01 Aligned_cols=121 Identities=21% Similarity=0.266 Sum_probs=81.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|++.|+++.++||+....+..+...+|+...-...+... ++
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------------------------- 128 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVK-DG-------------------------- 128 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEE-TT--------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEE-CC--------------------------
Confidence 577899999999999999999999999888888888777621000000000 00
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEE-eCcccHHHHHHHHHcc---cCceE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR-VSPLQKAQVTSLVKKG---ARKIT 854 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r-~sP~qK~~iv~~lk~~---~~~~v 854 (1097)
.++|+ +... ..+..|...+..+.+. ....+
T Consensus 129 ----------------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~ 162 (211)
T 1l7m_A 129 ----------------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDT 162 (211)
T ss_dssp ----------------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGE
T ss_pred ----------------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHE
Confidence 00000 0001 1134576666555432 23569
Q ss_pred EEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 855 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 855 laiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
+++||+.||++|++.|+++++|.+.+. .+..||+++.+
T Consensus 163 ~~iGD~~~Di~~~~~ag~~~~~~~~~~--~~~~a~~v~~~ 200 (211)
T 1l7m_A 163 VAVGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEK 200 (211)
T ss_dssp EEEECSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECS
T ss_pred EEEecChhHHHHHHHCCCEEEECCCHH--HHhhcceeecc
Confidence 999999999999999999999964433 57789999876
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=3.1e-07 Score=98.59 Aligned_cols=187 Identities=16% Similarity=0.171 Sum_probs=99.2
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHH-HHHHH
Q 001335 702 EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEV-KRELN 780 (1097)
Q Consensus 702 ~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 780 (1097)
+.+.++|++++ +|++++++|||....+..+.+++++... ...|+.++..+.... ..+.. ....+.... ...+.
T Consensus 22 ~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~---~~~I~~NGa~i~~~~-~~~~~-~~~~~~~~~~~~~~~ 95 (244)
T 1s2o_A 22 EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEP---DYWLTAVGSEIYHPE-GLDQH-WADYLSEHWQRDILQ 95 (244)
T ss_dssp HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCC---SEEEETTTTEEEETT-EECHH-HHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCC---CEEEECCCcEEEeCC-CcChH-HHHHHhccccHHHHH
Confidence 34566777755 6899999999999999999999887432 246677776654311 11111 111111000 01111
Q ss_pred HHHHhhhhcc-c---ccCCCeEEEEEcCccchhhcChhHHHHHHh----hhccCCceEEEEeCcc--cHHHHHHHHHccc
Q 001335 781 KCIDEAQQYI-H---SISGEKLALIIDGKCLMYALDPSLRVILLN----LSLNCSSVVCCRVSPL--QKAQVTSLVKKGA 850 (1097)
Q Consensus 781 ~~~~~~~~~~-~---~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~----l~~~~~~vi~~r~sP~--qK~~iv~~lk~~~ 850 (1097)
.......... . ......+.+..+....... .+.+.+.+.. +.......-+.++.|. .|...++.+.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~ 174 (244)
T 1s2o_A 96 AIADGFEALKPQSPLEQNPWKISYHLDPQACPTV-IDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHL 174 (244)
T ss_dssp HHHHTCTTEEECCGGGCBTTBEEEEECTTSCTHH-HHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHT
T ss_pred HHHHhccCccccCcccCCCeEEEEEeChhhHHHH-HHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHh
Confidence 1111111000 0 0011122222222111110 1122333321 1110111124466666 4999888887643
Q ss_pred C---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhh-------cceeccchH
Q 001335 851 R---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMA-------SDFAIAQFR 896 (1097)
Q Consensus 851 ~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~-------AD~vi~~~~ 896 (1097)
+ ..++++||+.||++|++.|++||+|++... ..+.. ||++..+..
T Consensus 175 ~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~-~~k~~a~~~~~~a~~v~~~~~ 229 (244)
T 1s2o_A 175 AMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQP-ELLHWYDQWGDSRHYRAQSSH 229 (244)
T ss_dssp TCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCH-HHHHHHHHHCCTTEEECSSCH
T ss_pred CCCHHHEEEECCchhhHHHHhccCcEEEEcCCcH-HHHHHHhcccccceeecCCcc
Confidence 3 569999999999999999999999954433 35664 789876543
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.36 E-value=6.7e-07 Score=93.57 Aligned_cols=125 Identities=21% Similarity=0.270 Sum_probs=87.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-...+... ++
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~-~~------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVE-ND------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEE-TT-------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEe-CC-------------------------
Confidence 4689999999999999999999999999999999999988843111111000 00
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEe-CcccHHHHHHHHHcc---cCce
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRV-SPLQKAQVTSLVKKG---ARKI 853 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~-sP~qK~~iv~~lk~~---~~~~ 853 (1097)
.++| .+...+ ..+.|...++.+.+. ....
T Consensus 128 -----------------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~ 160 (217)
T 3m1y_A 128 -----------------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTN 160 (217)
T ss_dssp -----------------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTT
T ss_pred -----------------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhH
Confidence 0000 011111 234466666655443 2356
Q ss_pred EEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh
Q 001335 854 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 854 vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~ 897 (1097)
+++|||+.||+.|++.|++++++.+.+. .+..||+++.+.++
T Consensus 161 ~i~vGDs~~Di~~a~~aG~~~~~~~~~~--l~~~ad~v~~~~dl 202 (217)
T 3m1y_A 161 TLVVGDGANDLSMFKHAHIKIAFNAKEV--LKQHATHCINEPDL 202 (217)
T ss_dssp EEEEECSGGGHHHHTTCSEEEEESCCHH--HHTTCSEEECSSBG
T ss_pred EEEEeCCHHHHHHHHHCCCeEEECccHH--HHHhcceeecccCH
Confidence 9999999999999999999999944433 77899999987665
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.30 E-value=2.2e-06 Score=91.12 Aligned_cols=181 Identities=18% Similarity=0.167 Sum_probs=97.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
..+.+.+.++|++++++|++++++||+....+..+...+|+.. . .+..++..+....+. .....+ + ...
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~---~--~i~~nGa~i~~~~~~----~~~~~l-~-~~~ 87 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---P--VVAEDGGAISYKKKR----IFLASM-D-EEW 87 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---C--EEEGGGTEEEETTEE----EESCCC-S-HHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC---e--EEEeCCcEEEeCCEE----EEeccH-H-HHH
Confidence 3567888999999999999999999999999999999988632 1 233443322210000 000000 0 011
Q ss_pred HHHHHHH-hh-hhcc---cccCCCeEEEEEc-CccchhhcChhHHHHHHhhhccCCce---EEEEeCcc--cHHHHHHHH
Q 001335 778 ELNKCID-EA-QQYI---HSISGEKLALIID-GKCLMYALDPSLRVILLNLSLNCSSV---VCCRVSPL--QKAQVTSLV 846 (1097)
Q Consensus 778 ~~~~~~~-~~-~~~~---~~~~~~~~~lvi~-G~~l~~~l~~~l~~~f~~l~~~~~~v---i~~r~sP~--qK~~iv~~l 846 (1097)
++..... .. +... .......+ .+.+ +.. .+........+......+ .+.+..|. .|...++.+
T Consensus 88 ~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~ 161 (231)
T 1wr8_A 88 ILWNEIRKRFPNARTSYTMPDRRAGL-VIMRETIN-----VETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKA 161 (231)
T ss_dssp HHHHHHHHHCTTCCBCTTGGGCSSCE-EECTTTSC-----HHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHH
T ss_pred HHHHHHHHhCCCceEEecCCCceeeE-EEECCCCC-----HHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHH
Confidence 1111111 11 0000 00000011 1111 100 011122221111111111 12344444 588888877
Q ss_pred Hcc---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 847 KKG---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 847 k~~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
.+. ....++++||+.||++|++.|++||+|.+... ..+..||+++.+..
T Consensus 162 ~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~-~~~~~a~~v~~~~~ 213 (231)
T 1wr8_A 162 SEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPK-ILKENADYVTKKEY 213 (231)
T ss_dssp HHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHTTCSEECSSCH
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCH-HHHhhCCEEecCCC
Confidence 653 23569999999999999999999999954433 36778999987643
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=2.7e-07 Score=99.08 Aligned_cols=50 Identities=22% Similarity=0.325 Sum_probs=41.2
Q ss_pred EEEeCcc--cHHHHHHHHHcccCceEEEecC----CCCChhhhhhcC-eeEEecCccc
Q 001335 831 CCRVSPL--QKAQVTSLVKKGARKITLSIGD----GANDVSMIQAAH-IGVGISGQEG 881 (1097)
Q Consensus 831 ~~r~sP~--qK~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~Ad-vGIam~g~e~ 881 (1097)
+.++.|. .|+..++.+.+ ....|+++|| |.||++||+.|+ +|++|++.+.
T Consensus 178 ~leI~~~gv~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~ 234 (246)
T 3f9r_A 178 SFDVFPVGWDKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKD 234 (246)
T ss_dssp EEEEEETTCSGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHH
T ss_pred EEEEEeCCCCHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHH
Confidence 4556666 49999998887 6788999999 799999999996 8999966544
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.28 E-value=2.1e-06 Score=93.93 Aligned_cols=53 Identities=9% Similarity=0.119 Sum_probs=42.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAI 755 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~ 755 (1097)
.+-+.+.++|++|+++|++++++|||....+..+..++++.. . ..|+.++..+
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~--~--~~I~~NGa~i 78 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG--L--PLIAENGAVI 78 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT--S--CEEEGGGTEE
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC--C--eEEEeCCCeE
Confidence 455778999999999999999999999999999999998732 0 2445555544
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.28 E-value=1.9e-06 Score=100.27 Aligned_cols=120 Identities=25% Similarity=0.321 Sum_probs=88.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+...-...+.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~------------------------------- 304 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELE------------------------------- 304 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEE-------------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEE-------------------------------
Confidence 7999999999999999999999999999999999999998421100000
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEe-----CcccHHHHHHHHHccc---
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRV-----SPLQKAQVTSLVKKGA--- 850 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~-----sP~qK~~iv~~lk~~~--- 850 (1097)
+.+| .+..+. .++-|..+++.+.+..
T Consensus 305 ----------------------~~dg------------------------~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~ 338 (415)
T 3p96_A 305 ----------------------IVDG------------------------TLTGRVVGPIIDRAGKATALREFAQRAGVP 338 (415)
T ss_dssp ----------------------EETT------------------------EEEEEECSSCCCHHHHHHHHHHHHHHHTCC
T ss_pred ----------------------EeCC------------------------EEEeeEccCCCCCcchHHHHHHHHHHcCcC
Confidence 0111 022221 1455777666665432
Q ss_pred CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh
Q 001335 851 RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 851 ~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~ 897 (1097)
...+++||||.||+.|++.||+|+++.+.+. .+..||+++...++
T Consensus 339 ~~~~i~vGD~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~~~l 383 (415)
T 3p96_A 339 MAQTVAVGDGANDIDMLAAAGLGIAFNAKPA--LREVADASLSHPYL 383 (415)
T ss_dssp GGGEEEEECSGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECSSCT
T ss_pred hhhEEEEECCHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEccCCH
Confidence 3579999999999999999999999954443 78899999876555
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=2.7e-06 Score=83.46 Aligned_cols=107 Identities=15% Similarity=0.230 Sum_probs=75.5
Q ss_pred cCChhHHHHHHHHHHC-CcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEEEecc
Q 001335 532 AASPDEAALVTAAKNF-GFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGA 610 (1097)
Q Consensus 532 ~~sp~e~al~~~a~~~-g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa 610 (1097)
+++|...|++++|++. |..... ... ......+|++..++..|.+ +|+ -+.+|+
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~--------------------~~~-~~~~~~~F~a~~G~~Gv~v---~G~--~v~vGn 102 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERD--------------------VQS-LHATFVPFTAQSRMSGINI---DNR--MIRKGS 102 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCC--------------------HHH-HTCEEEEEETTTTEEEEEE---TTE--EEEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCccc--------------------ccc-cccceeeccccCCCCeEEE---CCE--EEEEeC
Confidence 5799999999999986 643211 000 0011357888777777744 453 456799
Q ss_pred hhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceE
Q 001335 611 DSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTL 690 (1097)
Q Consensus 611 ~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~l 690 (1097)
+..|...+...+......+.+.+++++.+|.+++++|. |-.+
T Consensus 103 ~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~--------------------------------------d~~l 144 (156)
T 1svj_A 103 VDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVE--------------------------------------GSRV 144 (156)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEE--------------------------------------TTEE
T ss_pred cHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEE--------------------------------------CCEE
Confidence 88777766543322334577788899999999999994 6689
Q ss_pred EEEeeeccccCC
Q 001335 691 IGCTAIEDKLQE 702 (1097)
Q Consensus 691 lG~~~ieD~lr~ 702 (1097)
+|++++.|++|+
T Consensus 145 ~GvIalaD~iK~ 156 (156)
T 1svj_A 145 LGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEecCCCC
Confidence 999999999996
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.23 E-value=7.3e-07 Score=96.70 Aligned_cols=59 Identities=29% Similarity=0.406 Sum_probs=46.7
Q ss_pred cHHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh
Q 001335 838 QKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 838 qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~ 897 (1097)
.|...++.+.+.. ...+++|||+.||++|++.|++||+|.+... ..+..||+++.+..-
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~~~~ 248 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKE-DVKAAADYVTAPIDE 248 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCCGGG
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccH-HHHhhCCEEeccCch
Confidence 5888777776542 3579999999999999999999999954433 367899999877655
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.5e-06 Score=90.51 Aligned_cols=134 Identities=18% Similarity=0.230 Sum_probs=84.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
.+.+++.++++.|+++|+++.++||.....+..+.+.+|+.... .+..
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~------------------------------ 129 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFAV------------------------------ 129 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEEE------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEEe------------------------------
Confidence 37899999999999999999999999999999999999884211 1100
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
.++.++.... ..+.....+|..|...+..........++++|
T Consensus 130 --------------------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vG 171 (219)
T 3kd3_A 130 --------------------ETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIG 171 (219)
T ss_dssp --------------------EEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEE
T ss_pred --------------------eeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEE
Confidence 0011000000 00011112344555555443222457899999
Q ss_pred CCCCChhhhhh--cCeeEEec-CccchhhhhhcceeccchHhHHHHH
Q 001335 859 DGANDVSMIQA--AHIGVGIS-GQEGMQAVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 859 DG~ND~~ml~~--AdvGIam~-g~e~~~a~~~AD~vi~~~~~l~~ll 902 (1097)
|+.||++|+++ +.++|++. +......+..||+++.+..-+..+|
T Consensus 172 D~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 172 DGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp SSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred CCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 99999999975 22444442 2233336778999999988776653
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=2.5e-06 Score=88.43 Aligned_cols=130 Identities=18% Similarity=0.125 Sum_probs=87.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-....
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 117 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD------------------------------- 117 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG-------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce-------------------------------
Confidence 3678999999999999999999999999999988888888742110000
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCc--ccHHHHHHHHHcccCceEE
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSP--LQKAQVTSLVKKGARKITL 855 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP--~qK~~iv~~lk~~~~~~vl 855 (1097)
++++. . ....| .--..+.+.+.- ....++
T Consensus 118 -----------------------i~~~~------------------------~-~~~kp~~~~~~~~~~~~g~-~~~~~i 148 (205)
T 3m9l_A 118 -----------------------VLGRD------------------------E-APPKPHPGGLLKLAEAWDV-SPSRMV 148 (205)
T ss_dssp -----------------------EECTT------------------------T-SCCTTSSHHHHHHHHHTTC-CGGGEE
T ss_pred -----------------------EEeCC------------------------C-CCCCCCHHHHHHHHHHcCC-CHHHEE
Confidence 00000 0 00011 111222333322 346799
Q ss_pred EecCCCCChhhhhhcCe-eEEecCccchhhhhhcceeccchHhHHHHHHhhhhh
Q 001335 856 SIGDGANDVSMIQAAHI-GVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRW 908 (1097)
Q Consensus 856 aiGDG~ND~~ml~~Adv-GIam~g~e~~~a~~~AD~vi~~~~~l~~lll~~Gr~ 908 (1097)
+|||+.||+.|.+.|++ +|+|.+... ..+..||+++.+..-|..++=.+++.
T Consensus 149 ~iGD~~~Di~~a~~aG~~~i~v~~~~~-~~~~~ad~v~~~~~el~~~~~~~~~~ 201 (205)
T 3m9l_A 149 MVGDYRFDLDCGRAAGTRTVLVNLPDN-PWPELTDWHARDCAQLRDLLSAEGHH 201 (205)
T ss_dssp EEESSHHHHHHHHHHTCEEEECSSSSC-SCGGGCSEECSSHHHHHHHHHHTTCC
T ss_pred EECCCHHHHHHHHHcCCEEEEEeCCCC-cccccCCEEeCCHHHHHHHHHhcccc
Confidence 99999999999999999 999944332 25678999999988877764444443
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.20 E-value=2.2e-06 Score=96.52 Aligned_cols=76 Identities=14% Similarity=0.228 Sum_probs=56.1
Q ss_pred cccHHHHHHHHHcc-cCceEEEecCCCCChhhhhhc----CeeEEecCccchhhhhhcceeccchH------hHHHHHHh
Q 001335 836 PLQKAQVTSLVKKG-ARKITLSIGDGANDVSMIQAA----HIGVGISGQEGMQAVMASDFAIAQFR------FLTDLLLV 904 (1097)
Q Consensus 836 P~qK~~iv~~lk~~-~~~~vlaiGDG~ND~~ml~~A----dvGIam~g~e~~~a~~~AD~vi~~~~------~l~~lll~ 904 (1097)
+.+|+..++.+... ..++|+++|||.||++|++.| ++||+| ++.. .++..||+++.+.+ .+.++ +.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~-~lk~~Ad~v~~~~~~dGV~~~l~~~-~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNE-YALKHADVVIISPTAMSEAKVIELF-ME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCH-HHHTTCSEEEECSSTHHHHHHHHHH-HH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCH-HHHhhCcEEecCCCCCHHHHHHHHH-HH
Confidence 45698888866541 114599999999999999999 999999 5433 38899999987532 24554 67
Q ss_pred hhhhhHHHHhH
Q 001335 905 HGRWSYLRICK 915 (1097)
Q Consensus 905 ~Gr~~~~~i~~ 915 (1097)
.||..+ ++-+
T Consensus 282 ~~~~~~-~~~~ 291 (332)
T 1y8a_A 282 RKERAF-EVLS 291 (332)
T ss_dssp HGGGGG-GGGG
T ss_pred cCCchh-HHHH
Confidence 888877 5444
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=1.4e-06 Score=94.49 Aligned_cols=61 Identities=13% Similarity=0.195 Sum_probs=47.6
Q ss_pred EEeCccc--HHHHHHHHHcc-cCceEEEecC----CCCChhhhhhcC-eeEEecCccchhhhhhcceeccc
Q 001335 832 CRVSPLQ--KAQVTSLVKKG-ARKITLSIGD----GANDVSMIQAAH-IGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 832 ~r~sP~q--K~~iv~~lk~~-~~~~vlaiGD----G~ND~~ml~~Ad-vGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
.++.|.. |+..++.+ .. ....|++||| |.||++||+.|+ +|++|.++. ..++..||++...
T Consensus 189 leI~~~~vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~-~~~k~~a~~v~~~ 257 (262)
T 2fue_A 189 FDVFPEGWDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQ-DTVQRCREIFFPE 257 (262)
T ss_dssp EEEEETTCSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHH-HHHHHHHHHHCTT
T ss_pred EEEecCCCCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCC-HHHHHhhheeCCC
Confidence 4566654 99999988 32 4467999999 999999999999 599995443 3488889987654
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.17 E-value=3.1e-06 Score=94.35 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=82.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|+++|+++.++||.....+..+.+.+|+...-...+.... +
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~d-g-------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRD-N-------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEET-T--------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeC-C--------------------------
Confidence 4899999999999999999999999999999999999998421110000000 0
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEE-eCcccHHHHHHHHHcc---cCceE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR-VSPLQKAQVTSLVKKG---ARKIT 854 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r-~sP~qK~~iv~~lk~~---~~~~v 854 (1097)
..+|. +... ..++-|..+++.+.+. ....+
T Consensus 232 ----------------------~~tg~------------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~ 265 (317)
T 4eze_A 232 ----------------------VLTDN------------------------ITLPIMNAANKKQTLVDLAARLNIATENI 265 (317)
T ss_dssp ----------------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGE
T ss_pred ----------------------eeeee------------------------EecccCCCCCCHHHHHHHHHHcCCCcceE
Confidence 00000 0000 1234455555544332 23579
Q ss_pred EEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 855 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 855 laiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
++|||+.||+.|.+.||+|+++.+.+. .+..||.++..
T Consensus 266 i~VGDs~~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~~ 303 (317)
T 4eze_A 266 IACGDGANDLPMLEHAGTGIAWKAKPV--VREKIHHQINY 303 (317)
T ss_dssp EEEECSGGGHHHHHHSSEEEEESCCHH--HHHHCCEEESS
T ss_pred EEEeCCHHHHHHHHHCCCeEEeCCCHH--HHHhcCeeeCC
Confidence 999999999999999999999954433 67788888753
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.16 E-value=2.5e-06 Score=90.50 Aligned_cols=125 Identities=21% Similarity=0.188 Sum_probs=83.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
.++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 149 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--------------------------------- 149 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee---------------------------------
Confidence 45789999999999999999999999999988888888887432110
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEe
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 857 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlai 857 (1097)
++.+.... ...-.|+--..+.+.+.- ....+++|
T Consensus 150 -----------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~lg~-~~~~~i~v 183 (237)
T 4ex6_A 150 -----------------------IAGDDSVE----------------------RGKPHPDMALHVARGLGI-PPERCVVI 183 (237)
T ss_dssp -----------------------EECTTTSS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEE
T ss_pred -----------------------EEeCCCCC----------------------CCCCCHHHHHHHHHHcCC-CHHHeEEE
Confidence 11111000 000011112233333332 34679999
Q ss_pred cCCCCChhhhhhcCe---eEEecCccchhhhh-hcceeccchHhHHHH
Q 001335 858 GDGANDVSMIQAAHI---GVGISGQEGMQAVM-ASDFAIAQFRFLTDL 901 (1097)
Q Consensus 858 GDG~ND~~ml~~Adv---GIam~g~e~~~a~~-~AD~vi~~~~~l~~l 901 (1097)
||+.||+.|.+.||+ +|++++......+. .||+++.+..-+..+
T Consensus 184 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~ 231 (237)
T 4ex6_A 184 GDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA 231 (237)
T ss_dssp ESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH
T ss_pred cCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 999999999999999 66664333222343 799999998887766
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=8.5e-06 Score=88.09 Aligned_cols=54 Identities=15% Similarity=0.278 Sum_probs=44.4
Q ss_pred ccHHHHHHHHHcccC-----ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 837 LQKAQVTSLVKKGAR-----KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 837 ~qK~~iv~~lk~~~~-----~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
..|...++.+.+..+ ..++++||+.||++|++.|++||+|.++.. . .++++...
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCC
Confidence 578998888876533 679999999999999999999999976665 2 67888765
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=98.15 E-value=4.5e-07 Score=97.43 Aligned_cols=58 Identities=21% Similarity=0.245 Sum_probs=44.2
Q ss_pred EEeCccc--HHHHHHHHHcc-cCceEEEecC----CCCChhhhhhcCe-eEEecCccchhhhhhccee
Q 001335 832 CRVSPLQ--KAQVTSLVKKG-ARKITLSIGD----GANDVSMIQAAHI-GVGISGQEGMQAVMASDFA 891 (1097)
Q Consensus 832 ~r~sP~q--K~~iv~~lk~~-~~~~vlaiGD----G~ND~~ml~~Adv-GIam~g~e~~~a~~~AD~v 891 (1097)
.++.|.. |+..++.+ .. ..+.|++||| |.||++||+.|+. |++|.++... +|..||||
T Consensus 180 leI~~~~~~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~-vk~~A~~v 245 (246)
T 2amy_A 180 FDVFPDGWDKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDT-RRICELLF 245 (246)
T ss_dssp EEEEETTCSGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHH-HHHHHHHC
T ss_pred EEEecCCCchHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHH-HHHHHhhc
Confidence 4556654 99888888 32 4467999999 9999999999988 9999665443 88999986
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.11 E-value=5.4e-06 Score=86.81 Aligned_cols=122 Identities=11% Similarity=0.126 Sum_probs=79.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
.+.+++.+.++.|++.|++++++|+.....+..+....|+...-...
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~--------------------------------- 140 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDAL--------------------------------- 140 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEE---------------------------------
Confidence 46789999999999999999999999888887777777764221110
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
+.+.... ...-.|.--..+.+.+.- ....+++||
T Consensus 141 -----------------------~~~~~~~----------------------~~kp~~~~~~~~~~~~~i-~~~~~i~iG 174 (226)
T 1te2_A 141 -----------------------ASAEKLP----------------------YSKPHPQVYLDCAAKLGV-DPLTCVALE 174 (226)
T ss_dssp -----------------------EECTTSS----------------------CCTTSTHHHHHHHHHHTS-CGGGEEEEE
T ss_pred -----------------------EeccccC----------------------CCCCChHHHHHHHHHcCC-CHHHeEEEe
Confidence 0000000 000001111233333332 346799999
Q ss_pred CCCCChhhhhhcCeeEEe----cCccchhhhhhcceeccchHhHHH
Q 001335 859 DGANDVSMIQAAHIGVGI----SGQEGMQAVMASDFAIAQFRFLTD 900 (1097)
Q Consensus 859 DG~ND~~ml~~AdvGIam----~g~e~~~a~~~AD~vi~~~~~l~~ 900 (1097)
|+.||+.|++.|++++++ .+... ..+..||+++.+..-+..
T Consensus 175 D~~nDi~~a~~aG~~~~~~~~~~~~~~-~~~~~a~~v~~~~~el~~ 219 (226)
T 1te2_A 175 DSVNGMIASKAARMRSIVVPAPEAQND-PRFVLANVKLSSLTELTA 219 (226)
T ss_dssp SSHHHHHHHHHTTCEEEECCCTTTTTC-GGGGGSSEECSCGGGCCH
T ss_pred CCHHHHHHHHHcCCEEEEEcCCCCccc-ccccccCeEECCHHHHhH
Confidence 999999999999999988 22221 256789999988766433
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.09 E-value=7e-06 Score=81.72 Aligned_cols=105 Identities=12% Similarity=0.113 Sum_probs=76.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
.+.+++.++|+.|+++|++++++||+....+..+.+.+|+..
T Consensus 36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-------------------------------------- 77 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE-------------------------------------- 77 (162)
T ss_dssp EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE--------------------------------------
T ss_pred eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh--------------------------------------
Confidence 345678899999999999999999999999999999988731
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHH----HHHHcccCceE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVT----SLVKKGARKIT 854 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv----~~lk~~~~~~v 854 (1097)
.+.. ++.|...+ +.+.- ..+.+
T Consensus 78 ---------------------------------------------------~~~~--~kp~~~~~~~~~~~~~~-~~~~~ 103 (162)
T 2p9j_A 78 ---------------------------------------------------IYTG--SYKKLEIYEKIKEKYSL-KDEEI 103 (162)
T ss_dssp ---------------------------------------------------EEEC--C--CHHHHHHHHHHTTC-CGGGE
T ss_pred ---------------------------------------------------hccC--CCCCHHHHHHHHHHcCC-CHHHE
Confidence 0101 12223332 22222 34579
Q ss_pred EEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 855 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 855 laiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
++|||+.||+.|.+.|++++++.+.. ...+..||+++.+..
T Consensus 104 ~~vGD~~~Di~~a~~ag~~~~~~~~~-~~~~~~a~~v~~~~~ 144 (162)
T 2p9j_A 104 GFIGDDVVDIEVMKKVGFPVAVRNAV-EEVRKVAVYITQRNG 144 (162)
T ss_dssp EEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECSSCS
T ss_pred EEECCCHHHHHHHHHCCCeEEecCcc-HHHHhhCCEEecCCC
Confidence 99999999999999999999884332 226678999988744
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.08 E-value=6.1e-06 Score=86.68 Aligned_cols=121 Identities=17% Similarity=0.152 Sum_probs=85.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 131 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDA--------------------------------- 131 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheee---------------------------------
Confidence 36789999999999999999999999998888888888887432111
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCc--ccHHHHHHHHHcc---cCc
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSP--LQKAQVTSLVKKG---ARK 852 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP--~qK~~iv~~lk~~---~~~ 852 (1097)
++.+...+ +-|...++.+.+. ...
T Consensus 132 ---------------------------------------------------~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 160 (226)
T 3mc1_A 132 ---------------------------------------------------IVGSSLDGKLSTKEDVIRYAMESLNIKSD 160 (226)
T ss_dssp ---------------------------------------------------EEEECTTSSSCSHHHHHHHHHHHHTCCGG
T ss_pred ---------------------------------------------------eeccCCCCCCCCCHHHHHHHHHHhCcCcc
Confidence 11122111 2244444433332 335
Q ss_pred eEEEecCCCCChhhhhhcCe---eEEecCccchh-hhhhcceeccchHhHHHHH
Q 001335 853 ITLSIGDGANDVSMIQAAHI---GVGISGQEGMQ-AVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 853 ~vlaiGDG~ND~~ml~~Adv---GIam~g~e~~~-a~~~AD~vi~~~~~l~~ll 902 (1097)
.+++|||+.||+.|.+.|++ +|+++...... .+..||+++.++.-+..++
T Consensus 161 ~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 161 DAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp GEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 79999999999999999999 55553322221 2578999999988887774
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.03 E-value=2.9e-05 Score=80.43 Aligned_cols=123 Identities=18% Similarity=0.188 Sum_probs=86.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|++. +++.++|+.....+..+.+.+|+...-...+....+.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 121 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCc--------------------------
Confidence 5789999999999999 9999999999999999999998843100001110000
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEE--EeCcccHHHHHHHHHcccCceEEE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCC--RVSPLQKAQVTSLVKKGARKITLS 856 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~--r~sP~qK~~iv~~lk~~~~~~vla 856 (1097)
.... .-.|..|...++.+.. ....+++
T Consensus 122 --------------------------------------------------~~~~~~~p~p~~~~~~l~~l~~-~~~~~~~ 150 (206)
T 1rku_A 122 --------------------------------------------------RVVGYQLRQKDPKRQSVIAFKS-LYYRVIA 150 (206)
T ss_dssp --------------------------------------------------CEEEEECCSSSHHHHHHHHHHH-TTCEEEE
T ss_pred --------------------------------------------------eEEeeecCCCchHHHHHHHHHh-cCCEEEE
Confidence 0111 1357778888888876 5678999
Q ss_pred ecCCCCChhhhhhcCeeEEecCccchhhhhh-ccee-ccchHhHHHH
Q 001335 857 IGDGANDVSMIQAAHIGVGISGQEGMQAVMA-SDFA-IAQFRFLTDL 901 (1097)
Q Consensus 857 iGDG~ND~~ml~~AdvGIam~g~e~~~a~~~-AD~v-i~~~~~l~~l 901 (1097)
|||+.||+.|.+.|++++++...+. .+.. ++++ +.+..-+..+
T Consensus 151 iGD~~~Di~~a~~aG~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 151 AGDSYNDTTMLSEAHAGILFHAPEN--VIREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp EECSSTTHHHHHHSSEEEEESCCHH--HHHHCTTSCEECSHHHHHHH
T ss_pred EeCChhhHHHHHhcCccEEECCcHH--HHHHHhhhccccchHHHHHH
Confidence 9999999999999999999844332 3443 4554 5555555444
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.02 E-value=7e-06 Score=86.44 Aligned_cols=128 Identities=20% Similarity=0.243 Sum_probs=86.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.|++.++++.|+++|++++++||.....+..+.+.+|+...+ .+...
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~~~---------------------------- 134 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANR---------------------------- 134 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEEC----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEeee----------------------------
Confidence 368999999999999999999999999999999999999985311 11000
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEe------CcccHHHHHHHHHcccC
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRV------SPLQKAQVTSLVKKGAR 851 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~------sP~qK~~iv~~lk~~~~ 851 (1097)
+..+. ...+.+.- .+..|..+++.+.+..+
T Consensus 135 ----------------------~~~~~----------------------~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~ 170 (225)
T 1nnl_A 135 ----------------------LKFYF----------------------NGEYAGFDETQPTAESGGKGKVIKLLKEKFH 170 (225)
T ss_dssp ----------------------EEECT----------------------TSCEEEECTTSGGGSTTHHHHHHHHHHHHHC
T ss_pred ----------------------EEEcC----------------------CCcEecCCCCCcccCCCchHHHHHHHHHHcC
Confidence 00000 00011111 12356666665544223
Q ss_pred -ceEEEecCCCCChhhhhhcCeeEEecCcc-chhhhhhcceeccchHhHH
Q 001335 852 -KITLSIGDGANDVSMIQAAHIGVGISGQE-GMQAVMASDFAIAQFRFLT 899 (1097)
Q Consensus 852 -~~vlaiGDG~ND~~ml~~AdvGIam~g~e-~~~a~~~AD~vi~~~~~l~ 899 (1097)
..+++|||+.||+.|.+.||++|++.... .......+|+++.++.-+.
T Consensus 171 ~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~ 220 (225)
T 1nnl_A 171 FKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELL 220 (225)
T ss_dssp CSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGC
T ss_pred CCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHH
Confidence 57999999999999999999988884322 1223456899988876543
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.5e-05 Score=84.20 Aligned_cols=41 Identities=17% Similarity=0.033 Sum_probs=38.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.+.++.|++.|+++.++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999999999999984
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.5e-05 Score=84.76 Aligned_cols=121 Identities=17% Similarity=0.149 Sum_probs=83.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-...
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 156 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYI-------------------------------- 156 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEE--------------------------------
Confidence 467899999999999999999999999988888888888874321111
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeC--cccHHHHHHHHHcc---c-C
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVS--PLQKAQVTSLVKKG---A-R 851 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~s--P~qK~~iv~~lk~~---~-~ 851 (1097)
+++... .+-|..+++.+.+. . .
T Consensus 157 ----------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~g~~~~ 184 (240)
T 3sd7_A 157 ----------------------------------------------------AGSNLDGTRVNKNEVIQYVLDLCNVKDK 184 (240)
T ss_dssp ----------------------------------------------------EEECTTSCCCCHHHHHHHHHHHHTCCCG
T ss_pred ----------------------------------------------------EeccccCCCCCCHHHHHHHHHHcCCCCC
Confidence 111111 12233444333322 3 5
Q ss_pred ceEEEecCCCCChhhhhhcCe---eEEecCccchh-hhhhcceeccchHhHHHHH
Q 001335 852 KITLSIGDGANDVSMIQAAHI---GVGISGQEGMQ-AVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 852 ~~vlaiGDG~ND~~ml~~Adv---GIam~g~e~~~-a~~~AD~vi~~~~~l~~ll 902 (1097)
..+++|||+.||+.|.+.|++ +|+++...... .+..||+++.++.-+..+|
T Consensus 185 ~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 185 DKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 679999999999999999999 33332222111 2478999999988777664
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.1e-05 Score=92.03 Aligned_cols=41 Identities=12% Similarity=0.188 Sum_probs=39.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 738 (1097)
.++.|++++.|+.|+++|++|+|+||.....+..+|.++|+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 35789999999999999999999999999999999999987
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.1e-05 Score=85.14 Aligned_cols=43 Identities=23% Similarity=0.131 Sum_probs=38.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
-++.+++.+.++.|++.|++++++|+.....+..+.+..|+..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~ 132 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDI 132 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCT
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhh
Confidence 4578999999999999999999999999998888888888743
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.7e-05 Score=82.88 Aligned_cols=41 Identities=12% Similarity=0.068 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.+.+++.+.++.|++.|++++++|+.....+......+|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 45789999999999999999999999988888888777764
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.84 E-value=1.6e-05 Score=81.66 Aligned_cols=118 Identities=15% Similarity=0.149 Sum_probs=76.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
.+.+++.+.++.|++.|++++++|+....... ....+|+...-.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~----------------------------------- 128 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT----------------------------------- 128 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE-----------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee-----------------------------------
Confidence 46899999999999999999999999887776 666666532100
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
.++.+.... ...-.|+--..+.+.+.- ....+++||
T Consensus 129 ---------------------~~~~~~~~~----------------------~~Kp~~~~~~~~~~~~~i-~~~~~~~iG 164 (207)
T 2go7_A 129 ---------------------EILTSQSGF----------------------VRKPSPEAATYLLDKYQL-NSDNTYYIG 164 (207)
T ss_dssp ---------------------EEECGGGCC----------------------CCTTSSHHHHHHHHHHTC-CGGGEEEEE
T ss_pred ---------------------eEEecCcCC----------------------CCCCCcHHHHHHHHHhCC-CcccEEEEC
Confidence 011100000 000001111234444433 346799999
Q ss_pred CCCCChhhhhhcCee-EEecCccchhhhhhcceeccchHhHHHH
Q 001335 859 DGANDVSMIQAAHIG-VGISGQEGMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 859 DG~ND~~ml~~AdvG-Iam~g~e~~~a~~~AD~vi~~~~~l~~l 901 (1097)
|+.||+.|++.|+++ |+|.+.. . .||+++.+..-+..+
T Consensus 165 D~~nDi~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 165 DRTLDVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRI 203 (207)
T ss_dssp SSHHHHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHH
T ss_pred CCHHHHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHH
Confidence 999999999999998 6774332 2 689999887666554
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.83 E-value=2.2e-05 Score=81.24 Aligned_cols=122 Identities=11% Similarity=0.012 Sum_probs=80.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 134 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI---------------------------------- 134 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee----------------------------------
Confidence 5789999999999999999999999999999999988887532111
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
++.+.... ...-.|.--..+.+.+.- ....+++||
T Consensus 135 ----------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~iG 169 (214)
T 3e58_A 135 ----------------------VLSGEEFK----------------------ESKPNPEIYLTALKQLNV-QASRALIIE 169 (214)
T ss_dssp ----------------------EEEGGGCS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEE
T ss_pred ----------------------Eeeccccc----------------------CCCCChHHHHHHHHHcCC-ChHHeEEEe
Confidence 01100000 000011112233333432 346799999
Q ss_pred CCCCChhhhhhcCeeEEecCcc-chhhhhhcceeccchHhHH
Q 001335 859 DGANDVSMIQAAHIGVGISGQE-GMQAVMASDFAIAQFRFLT 899 (1097)
Q Consensus 859 DG~ND~~ml~~AdvGIam~g~e-~~~a~~~AD~vi~~~~~l~ 899 (1097)
|+.||+.|.+.|++++.+-+.. ....+..+|+++.+..-+.
T Consensus 170 D~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~ 211 (214)
T 3e58_A 170 DSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVL 211 (214)
T ss_dssp CSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGG
T ss_pred ccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHH
Confidence 9999999999999988763321 1113478999998876543
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.80 E-value=2.9e-05 Score=81.95 Aligned_cols=118 Identities=20% Similarity=0.185 Sum_probs=73.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|++.|+++.++|+... +..+...+|+...-..
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~---------------------------------- 135 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA---------------------------------- 135 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE----------------------------------
Confidence 4789999999999999999999999744 6667777776432110
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
++.+... -...-.|.--..+.+.+.- ....+++||
T Consensus 136 ----------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~lgi-~~~~~i~vG 170 (233)
T 3nas_A 136 ----------------------IVDPTTL----------------------AKGKPDPDIFLTAAAMLDV-SPADCAAIE 170 (233)
T ss_dssp ----------------------ECCC-------------------------------CCHHHHHHHHHTS-CGGGEEEEE
T ss_pred ----------------------EeeHhhC----------------------CCCCCChHHHHHHHHHcCC-CHHHEEEEe
Confidence 1111000 0000112222334444433 346799999
Q ss_pred CCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhHH
Q 001335 859 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLT 899 (1097)
Q Consensus 859 DG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l~ 899 (1097)
|+.||+.|.+.|++++++.+.... .+ .||+++.+..-+.
T Consensus 171 Ds~~Di~~a~~aG~~~~~~~~~~~-~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 171 DAEAGISAIKSAGMFAVGVGQGQP-ML-GADLVVRQTSDLT 209 (233)
T ss_dssp CSHHHHHHHHHTTCEEEECC---------CSEECSSGGGCC
T ss_pred CCHHHHHHHHHcCCEEEEECCccc-cc-cCCEEeCChHhCC
Confidence 999999999999999988544332 34 8999998866643
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.78 E-value=3e-05 Score=81.45 Aligned_cols=119 Identities=13% Similarity=0.064 Sum_probs=82.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 141 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH--------------------------------- 141 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE---------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce---------------------------------
Confidence 46789999999999999999999999998888888888887432111
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCc--ccHHH----HHHHHHcccC
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSP--LQKAQ----VTSLVKKGAR 851 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP--~qK~~----iv~~lk~~~~ 851 (1097)
+ +.+...+ +-|.. +.+.+.- ..
T Consensus 142 -----------------------~----------------------------~~~~~~~~~kp~~~~~~~~~~~~~~-~~ 169 (230)
T 3um9_A 142 -----------------------L----------------------------ISVDEVRLFKPHQKVYELAMDTLHL-GE 169 (230)
T ss_dssp -----------------------E----------------------------EEGGGTTCCTTCHHHHHHHHHHHTC-CG
T ss_pred -----------------------e----------------------------EehhhcccCCCChHHHHHHHHHhCC-Cc
Confidence 0 1110111 11222 2333322 34
Q ss_pred ceEEEecCCCCChhhhhhcCeeEEecC---ccchhhhhhcceeccchHhHHHH
Q 001335 852 KITLSIGDGANDVSMIQAAHIGVGISG---QEGMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 852 ~~vlaiGDG~ND~~ml~~AdvGIam~g---~e~~~a~~~AD~vi~~~~~l~~l 901 (1097)
..+++|||+.||+.|.+.|++++++-. ......+..+|+++.++.-+..+
T Consensus 170 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 170 SEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp GGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred ccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 679999999999999999999998721 11222456899999998776655
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.71 E-value=5.1e-05 Score=79.70 Aligned_cols=125 Identities=20% Similarity=0.210 Sum_probs=82.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-..
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 128 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--------------------------------- 128 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE---------------------------------
Confidence 46789999999999999999999999998888888888887432110
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEe
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 857 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlai 857 (1097)
++.+.... ...-.|.-...+.+.+.- ....+++|
T Consensus 129 -----------------------i~~~~~~~----------------------~~Kp~~~~~~~~~~~~~~-~~~~~~~v 162 (222)
T 2nyv_A 129 -----------------------IVGGDTFG----------------------EKKPSPTPVLKTLEILGE-EPEKALIV 162 (222)
T ss_dssp -----------------------EECTTSSC----------------------TTCCTTHHHHHHHHHHTC-CGGGEEEE
T ss_pred -----------------------EEecCcCC----------------------CCCCChHHHHHHHHHhCC-CchhEEEE
Confidence 11111000 000012222333344432 34679999
Q ss_pred cCCCCChhhhhhcCee-EEec-CccchhhhhhcceeccchHhHHHHH
Q 001335 858 GDGANDVSMIQAAHIG-VGIS-GQEGMQAVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 858 GDG~ND~~ml~~AdvG-Iam~-g~e~~~a~~~AD~vi~~~~~l~~ll 902 (1097)
||+.||+.|.+.||++ |++. |...... ..+|+++.++.-+..++
T Consensus 163 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 163 GDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp ESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred CCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 9999999999999998 6773 3221112 57899998877766653
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.71 E-value=2.9e-05 Score=82.96 Aligned_cols=42 Identities=21% Similarity=0.224 Sum_probs=38.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.++.+++.++++.|++.|++++++|+.....+..+.+.+|+.
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 467899999999999999999999999999899999998874
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.71 E-value=2e-05 Score=82.19 Aligned_cols=47 Identities=9% Similarity=0.013 Sum_probs=37.7
Q ss_pred cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhH
Q 001335 850 ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFL 898 (1097)
Q Consensus 850 ~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l 898 (1097)
....+++|||+.||+.|++.|+++++|.+... ..+ .||+++.+..-+
T Consensus 161 ~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 161 APSESIGLEDSQAGIQAIKDSGALPIGVGRPE-DLG-DDIVIVPDTSHY 207 (221)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEESCHH-HHC-SSSEEESSGGGC
T ss_pred ChhHeEEEeCCHHHHHHHHHCCCEEEEECCHH-Hhc-cccchhcCHHhC
Confidence 34679999999999999999999999965433 245 899998876653
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.69 E-value=8.7e-05 Score=78.10 Aligned_cols=115 Identities=13% Similarity=0.093 Sum_probs=78.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-...
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i-------------------------------- 149 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSI-------------------------------- 149 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeE--------------------------------
Confidence 357899999999999999999999999998888888888874321110
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccH------HHHHHHHHcccC
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQK------AQVTSLVKKGAR 851 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK------~~iv~~lk~~~~ 851 (1097)
+.+...+..| ..+.+.+.- ..
T Consensus 150 ----------------------------------------------------~~~~~~~~~Kp~~~~~~~~~~~lgi-~~ 176 (231)
T 3kzx_A 150 ----------------------------------------------------IGSGDTGTIKPSPEPVLAALTNINI-EP 176 (231)
T ss_dssp ----------------------------------------------------EEETSSSCCTTSSHHHHHHHHHHTC-CC
T ss_pred ----------------------------------------------------EcccccCCCCCChHHHHHHHHHcCC-Cc
Confidence 1111111111 233333332 33
Q ss_pred c-eEEEecCCCCChhhhhhcCe-eEEecCccchhhhhhcceeccchHhHHHH
Q 001335 852 K-ITLSIGDGANDVSMIQAAHI-GVGISGQEGMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 852 ~-~vlaiGDG~ND~~ml~~Adv-GIam~g~e~~~a~~~AD~vi~~~~~l~~l 901 (1097)
. .+++|||+.||+.|.+.|++ +|.+...+. ..+|+++.++.-+..+
T Consensus 177 ~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~ 224 (231)
T 3kzx_A 177 SKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNF 224 (231)
T ss_dssp STTEEEEESSHHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHH
T ss_pred ccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHH
Confidence 4 79999999999999999998 556643332 4678999988887765
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00012 Score=76.77 Aligned_cols=116 Identities=16% Similarity=0.026 Sum_probs=79.4
Q ss_pred ccCCChHHHHHHHHHcC-CeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 699 KLQEGVPACIETLARAG-IKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aG-Ikv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
++.+++.+.++.|++.| +++.++|+.....+..+.+.+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 57899999999999999 9999999988888888888777632110
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceE
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKIT 854 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~v 854 (1097)
.+++...| |...++.+.+. ....+
T Consensus 151 ---------------------------------------------------~~~~~~kp--k~~~~~~~~~~lgi~~~~~ 177 (234)
T 3ddh_A 151 ---------------------------------------------------HIEVMSDK--TEKEYLRLLSILQIAPSEL 177 (234)
T ss_dssp ---------------------------------------------------EEEEESCC--SHHHHHHHHHHHTCCGGGE
T ss_pred ---------------------------------------------------eeeecCCC--CHHHHHHHHHHhCCCcceE
Confidence 02222223 44444444332 34679
Q ss_pred EEecCCC-CChhhhhhcCeeEEec--C----ccchhhh-hhcceeccchHhHHHH
Q 001335 855 LSIGDGA-NDVSMIQAAHIGVGIS--G----QEGMQAV-MASDFAIAQFRFLTDL 901 (1097)
Q Consensus 855 laiGDG~-ND~~ml~~AdvGIam~--g----~e~~~a~-~~AD~vi~~~~~l~~l 901 (1097)
++|||+. ||+.|.+.|++++++- | ......+ ..+|+++.+..-+..+
T Consensus 178 i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 178 LMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp EEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred EEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 9999996 9999999999988762 1 1111112 3449999887766554
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00027 Score=77.49 Aligned_cols=67 Identities=16% Similarity=0.211 Sum_probs=50.3
Q ss_pred EEEEeCcc--cHHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh
Q 001335 830 VCCRVSPL--QKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 830 i~~r~sP~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~ 897 (1097)
.+.+..|. .|...++.+.+.. ...++++||+.||++|++.|++||+|.+... ..+..||+++.+..-
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~-~~~~~a~~v~~~~~~ 272 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQ-EAKNLHNLITDSEYS 272 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCH-HHHHHCCCBCSSCHH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccH-HHHHhCCEEcCCCCc
Confidence 45566554 4888777766542 3569999999999999999999999955433 377889998876443
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.66 E-value=4.3e-05 Score=80.52 Aligned_cols=124 Identities=9% Similarity=-0.054 Sum_probs=84.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-... +.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--~~---------------------------- 147 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHV--LS---------------------------- 147 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEE--EE----------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEE--EE----------------------------
Confidence 467899999999999999999999999998888888888875321110 00
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcc--cHHHHHHHHHcccCceEE
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPL--QKAQVTSLVKKGARKITL 855 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~--qK~~iv~~lk~~~~~~vl 855 (1097)
+.... ...|+ --..+.+.+.- ....++
T Consensus 148 --------------------------~~~~~------------------------~~kp~~~~~~~~~~~~~~-~~~~~~ 176 (233)
T 3umb_A 148 --------------------------VDAVR------------------------LYKTAPAAYALAPRAFGV-PAAQIL 176 (233)
T ss_dssp --------------------------GGGTT------------------------CCTTSHHHHTHHHHHHTS-CGGGEE
T ss_pred --------------------------ecccC------------------------CCCcCHHHHHHHHHHhCC-CcccEE
Confidence 00000 00011 11223333332 346799
Q ss_pred EecCCCCChhhhhhcCeeEEec---CccchhhhhhcceeccchHhHHHHH
Q 001335 856 SIGDGANDVSMIQAAHIGVGIS---GQEGMQAVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 856 aiGDG~ND~~ml~~AdvGIam~---g~e~~~a~~~AD~vi~~~~~l~~ll 902 (1097)
+|||+.||+.|.+.|++++++- +......+..+|+++.++.-+..++
T Consensus 177 ~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 177 FVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp EEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred EEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 9999999999999999999882 2222224567999999988877763
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.64 E-value=7.2e-05 Score=78.68 Aligned_cols=41 Identities=15% Similarity=0.130 Sum_probs=35.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCC---hhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDK---METAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~---~~ta~~ia~~~gi~ 739 (1097)
.+.+++.+.++.|++.|+++.++|+.. ...+....+.+|+.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~ 142 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLM 142 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcH
Confidence 458999999999999999999999998 77777777777764
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.63 E-value=8.4e-05 Score=75.09 Aligned_cols=54 Identities=13% Similarity=0.103 Sum_probs=38.5
Q ss_pred cCceEEEecCCCCChhhhhhcCee-EEe-cCccchhhh----hhcceeccchHhHHHHHH
Q 001335 850 ARKITLSIGDGANDVSMIQAAHIG-VGI-SGQEGMQAV----MASDFAIAQFRFLTDLLL 903 (1097)
Q Consensus 850 ~~~~vlaiGDG~ND~~ml~~AdvG-Iam-~g~e~~~a~----~~AD~vi~~~~~l~~lll 903 (1097)
....+++|||+.||+.|.+.|++. |++ .|....... ..+|+++.+..-+..+++
T Consensus 117 ~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 117 DLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp CCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 346799999999999999999973 444 233222122 457999999888777644
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=4.1e-05 Score=83.66 Aligned_cols=125 Identities=14% Similarity=0.047 Sum_probs=82.1
Q ss_pred ccCCChHHHHHHHHHcCC--eEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHH
Q 001335 699 KLQEGVPACIETLARAGI--KIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVK 776 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGI--kv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1097)
++.+++.++++.|++.|+ +++++|+.....+..+.+.+|+...-...
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v------------------------------- 190 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGL------------------------------- 190 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEE-------------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceE-------------------------------
Confidence 567899999999999999 99999999999888888888885321111
Q ss_pred HHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cC-c
Q 001335 777 RELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---AR-K 852 (1097)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~-~ 852 (1097)
+.+..... .. ..++-|..+++.+.+. .. +
T Consensus 191 -------------------------~~~~~~~~--------------------~~--~~~Kp~~~~~~~~~~~lgi~~~~ 223 (282)
T 3nuq_A 191 -------------------------TYCDYSRT--------------------DT--LVCKPHVKAFEKAMKESGLARYE 223 (282)
T ss_dssp -------------------------ECCCCSSC--------------------SS--CCCTTSHHHHHHHHHHHTCCCGG
T ss_pred -------------------------EEeccCCC--------------------cc--cCCCcCHHHHHHHHHHcCCCCcc
Confidence 00000000 00 0122233333333222 33 6
Q ss_pred eEEEecCCCCChhhhhhcCeeEEecCccch-----hhhhhcceeccchHhHHHH
Q 001335 853 ITLSIGDGANDVSMIQAAHIGVGISGQEGM-----QAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 853 ~vlaiGDG~ND~~ml~~AdvGIam~g~e~~-----~a~~~AD~vi~~~~~l~~l 901 (1097)
.+++|||+.||+.|.+.||+|++|....+. .....||+++.+..-|..+
T Consensus 224 ~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 224 NAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp GEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred cEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 799999999999999999998877322221 1134789999887765544
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00025 Score=74.70 Aligned_cols=120 Identities=16% Similarity=0.144 Sum_probs=81.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.++++.|++. +++.++|+.....+......+|+...-...
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 148 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDI-------------------------------- 148 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheE--------------------------------
Confidence 35789999999999999 999999999988888888888874321110
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeC--cccHHHHHHHHHccc----C
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVS--PLQKAQVTSLVKKGA----R 851 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~s--P~qK~~iv~~lk~~~----~ 851 (1097)
+.+... .+-|...++.+.+.. .
T Consensus 149 ----------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~g~~~~ 176 (238)
T 3ed5_A 149 ----------------------------------------------------FVSEDTGFQKPMKEYFNYVFERIPQFSA 176 (238)
T ss_dssp ----------------------------------------------------EEGGGTTSCTTCHHHHHHHHHTSTTCCG
T ss_pred ----------------------------------------------------EEecccCCCCCChHHHHHHHHHcCCCCh
Confidence 000000 111233333222222 3
Q ss_pred ceEEEecCCC-CChhhhhhcCeeE-Ee-cCccchhhhhhcceeccchHhHHHHH
Q 001335 852 KITLSIGDGA-NDVSMIQAAHIGV-GI-SGQEGMQAVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 852 ~~vlaiGDG~-ND~~ml~~AdvGI-am-~g~e~~~a~~~AD~vi~~~~~l~~ll 902 (1097)
..+++|||+. ||+.|.+.||++. .+ .+......+..+|+++.++.-+..++
T Consensus 177 ~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 177 EHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp GGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred hHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 5799999998 9999999999954 45 23222225668999999988887764
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.59 E-value=4.2e-05 Score=82.69 Aligned_cols=40 Identities=33% Similarity=0.288 Sum_probs=34.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 738 (1097)
++.+++.+.++.|++.|+++.++|++....+..+...+|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 5679999999999999999999999988887777776665
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00026 Score=75.08 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=36.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 47899999999999999999999999888888888888874
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.59 E-value=7.9e-05 Score=80.70 Aligned_cols=41 Identities=22% Similarity=0.121 Sum_probs=36.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 57899999999999999999999999988888888877764
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00021 Score=75.38 Aligned_cols=125 Identities=14% Similarity=0.134 Sum_probs=82.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|+ .|++++++|+.....+....+.+|+...-...
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 152 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKI--------------------------------- 152 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeE---------------------------------
Confidence 57899999999999 99999999999888888888888874321110
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITL 855 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vl 855 (1097)
+.+.... ..+-|..+++.+.+. ....++
T Consensus 153 -----------------------~~~~~~~--------------------------~~kp~~~~~~~~~~~lgi~~~~~~ 183 (240)
T 3qnm_A 153 -----------------------ILSEDLG--------------------------VLKPRPEIFHFALSATQSELRESL 183 (240)
T ss_dssp -----------------------EEGGGTT--------------------------CCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred -----------------------EEeccCC--------------------------CCCCCHHHHHHHHHHcCCCcccEE
Confidence 0000000 011122333322221 346799
Q ss_pred EecCCC-CChhhhhhcCeeEEecCccc-hhhhhhcceeccchHhHHHHHHhhhhh
Q 001335 856 SIGDGA-NDVSMIQAAHIGVGISGQEG-MQAVMASDFAIAQFRFLTDLLLVHGRW 908 (1097)
Q Consensus 856 aiGDG~-ND~~ml~~AdvGIam~g~e~-~~a~~~AD~vi~~~~~l~~lll~~Gr~ 908 (1097)
+|||+. ||+.|.+.|++++++.+... ...+..+|+++.+..-+..+ .+|+.
T Consensus 184 ~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~--~~~~~ 236 (240)
T 3qnm_A 184 MIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL--LEGHH 236 (240)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH--TC---
T ss_pred EECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH--Hhccc
Confidence 999995 99999999999998843332 12456899999998877765 45654
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00013 Score=77.52 Aligned_cols=137 Identities=12% Similarity=0.172 Sum_probs=86.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.|++.++++.|+++|+++.++|+.....+..+.+ |+... ..++.-...
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~-------------------------- 126 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHAS-------------------------- 126 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEE--------------------------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeE--------------------------
Confidence 3689999999999999999999999999888888877 66433 222111100
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEe
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 857 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlai 857 (1097)
..+..+..... +.....+.+.....|..+++.+.. ....+++|
T Consensus 127 ------------------------~~~~~~~~~~~------------kp~p~~~~~~~~~~K~~~~~~~~~-~~~~~~~v 169 (236)
T 2fea_A 127 ------------------------FDNDYIHIDWP------------HSCKGTCSNQCGCCKPSVIHELSE-PNQYIIMI 169 (236)
T ss_dssp ------------------------CSSSBCEEECT------------TCCCTTCCSCCSSCHHHHHHHHCC-TTCEEEEE
T ss_pred ------------------------EcCCceEEecC------------CCCccccccccCCcHHHHHHHHhc-cCCeEEEE
Confidence 00000000000 000000111125578888888865 56789999
Q ss_pred cCCCCChhhhhhcCeeEEecCccchhhhhh--cceeccchHhHHHH
Q 001335 858 GDGANDVSMIQAAHIGVGISGQEGMQAVMA--SDFAIAQFRFLTDL 901 (1097)
Q Consensus 858 GDG~ND~~ml~~AdvGIam~g~e~~~a~~~--AD~vi~~~~~l~~l 901 (1097)
||+.+|+.|.+.||+.+...+.. ..+... +|+++.++.-+..+
T Consensus 170 GDs~~Di~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~ 214 (236)
T 2fea_A 170 GDSVTDVEAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKE 214 (236)
T ss_dssp ECCGGGHHHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHH
T ss_pred eCChHHHHHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHH
Confidence 99999999999999988653321 112222 78988887776655
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.55 E-value=8.8e-05 Score=78.08 Aligned_cols=41 Identities=20% Similarity=0.216 Sum_probs=36.8
Q ss_pred ccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARA-GIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.+.++.|++. |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 5789999999999999 9999999999988888888888774
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.55 E-value=7.8e-05 Score=80.15 Aligned_cols=43 Identities=14% Similarity=0.091 Sum_probs=37.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.-++.+++.++++.|++.|++++++|+.....+..+.+.+|+.
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLT 150 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCH
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChH
Confidence 3467899999999999999999999999998888888888773
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00022 Score=74.91 Aligned_cols=121 Identities=12% Similarity=0.102 Sum_probs=79.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+...-...
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~--------------------------------- 145 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSI--------------------------------- 145 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHccee---------------------------------
Confidence 5679999999999999 999999999998888888888874321110
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcc--cHHHHHHHHHcccCceEEE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPL--QKAQVTSLVKKGARKITLS 856 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~--qK~~iv~~lk~~~~~~vla 856 (1097)
+.+... ....|+ --..+.+.+.- ....+++
T Consensus 146 -----------------------~~~~~~------------------------~~~kp~~~~~~~~~~~~~~-~~~~~~~ 177 (234)
T 3u26_A 146 -----------------------TTSEEA------------------------GFFKPHPRIFELALKKAGV-KGEEAVY 177 (234)
T ss_dssp -----------------------EEHHHH------------------------TBCTTSHHHHHHHHHHHTC-CGGGEEE
T ss_pred -----------------------Eecccc------------------------CCCCcCHHHHHHHHHHcCC-CchhEEE
Confidence 000000 000111 11223333332 3467999
Q ss_pred ecCCC-CChhhhhhcCe---eEEecCccchhhhhhcceeccchHhHHHHH
Q 001335 857 IGDGA-NDVSMIQAAHI---GVGISGQEGMQAVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 857 iGDG~-ND~~ml~~Adv---GIam~g~e~~~a~~~AD~vi~~~~~l~~ll 902 (1097)
|||+. ||+.|.+.|++ +|++.+.. ...+..||+++.++.-+..++
T Consensus 178 vGD~~~~Di~~a~~aG~~~~~v~~~~~~-~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 178 VGDNPVKDCGGSKNLGMTSILLDRKGEK-REFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp EESCTTTTHHHHHTTTCEEEEECSSSTT-GGGGGGCSEEESSTHHHHHHH
T ss_pred EcCCcHHHHHHHHHcCCEEEEECCCCCc-cccccCCCEeeCCHHHHHHHH
Confidence 99997 99999999995 44443322 225568999999988776653
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00035 Score=73.97 Aligned_cols=42 Identities=19% Similarity=0.149 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~ 146 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDR 146 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHH
Confidence 578999999999999999999999999988888888888743
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.45 E-value=4.8e-05 Score=78.78 Aligned_cols=41 Identities=12% Similarity=0.216 Sum_probs=36.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
-++.+++.+.++.|++. +++.++|+.....+..+.+.+|+.
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~ 122 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFM 122 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGG
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChH
Confidence 35789999999999999 999999999988888888887763
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00021 Score=75.84 Aligned_cols=41 Identities=15% Similarity=0.228 Sum_probs=32.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.++.+++.+.++.|++.|+++.++|+.....+...... |+.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 147 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP 147 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH
Confidence 46789999999999999999999999887766666555 653
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0001 Score=77.53 Aligned_cols=41 Identities=20% Similarity=0.291 Sum_probs=37.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH
Confidence 57899999999999999999999999988888888888874
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00029 Score=74.75 Aligned_cols=41 Identities=15% Similarity=0.114 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|+++|+++.++|+.....+..+...+|+.
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 150 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG 150 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc
Confidence 46799999999999999999999999888888888887763
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00025 Score=73.62 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.|++.+.++.|++ |+++.++|+.....+..+.+.+|+..
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~ 124 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHH 124 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGG
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchh
Confidence 578999999999999 99999999988888888888888743
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00018 Score=76.38 Aligned_cols=41 Identities=15% Similarity=0.157 Sum_probs=34.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
-++.+++.+.++.|++.|+++.++|+.....+...... |+.
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 148 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFP 148 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HST
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHH
Confidence 46789999999999999999999999887766665555 653
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0001 Score=78.74 Aligned_cols=50 Identities=16% Similarity=0.169 Sum_probs=37.3
Q ss_pred ceEEEecCCCCChhhhhhcCeeEEe--cCccchhhhhhcceeccchHhHHHH
Q 001335 852 KITLSIGDGANDVSMIQAAHIGVGI--SGQEGMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 852 ~~vlaiGDG~ND~~ml~~AdvGIam--~g~e~~~a~~~AD~vi~~~~~l~~l 901 (1097)
..+++|||+.||+.|.+.|++.+.+ .+......+..||+++.+..-+...
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~ 242 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPE 242 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHH
Confidence 6799999999999999999965433 2222223678999999987765443
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00043 Score=71.03 Aligned_cols=40 Identities=10% Similarity=0.161 Sum_probs=35.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
-++.+++.+ ++.|++. +++.++|+.....+..+.+.+|+.
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 112 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLL 112 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcH
Confidence 367899999 9999999 999999999988888888888874
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0005 Score=69.94 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=38.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCC-hhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDK-METAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~-~~ta~~ia~~~gi~ 739 (1097)
-++.+++.++|+.|+++|++++++||.. ...+..+.+.+|+.
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 3678999999999999999999999998 68888899888874
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00036 Score=73.02 Aligned_cols=52 Identities=15% Similarity=0.255 Sum_probs=38.7
Q ss_pred cCceEEEecCCCCChhhhhhcCee-EEecCccc------hhhhhh-cceeccchHhHHHH
Q 001335 850 ARKITLSIGDGANDVSMIQAAHIG-VGISGQEG------MQAVMA-SDFAIAQFRFLTDL 901 (1097)
Q Consensus 850 ~~~~vlaiGDG~ND~~ml~~AdvG-Iam~g~e~------~~a~~~-AD~vi~~~~~l~~l 901 (1097)
....+++|||+.||+.|.+.|+++ |++.+... ...+.. ||+++.+..-+..+
T Consensus 159 ~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 159 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred ChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 346799999999999999999998 66643322 124555 99999887766554
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00039 Score=73.90 Aligned_cols=122 Identities=9% Similarity=-0.002 Sum_probs=82.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|++. +++.++|+.....+..+...+|+.-..
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~~------------------------------------ 158 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWDV------------------------------------ 158 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCSC------------------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCeeE------------------------------------
Confidence 5679999999999997 999999999988888888888873100
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITL 855 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vl 855 (1097)
++.+. .... .+-|..+++.+.+. ....++
T Consensus 159 ----------------------~~~~~------------------------~~~~--~kp~~~~~~~~~~~lgi~~~~~~ 190 (254)
T 3umg_A 159 ----------------------IIGSD------------------------INRK--YKPDPQAYLRTAQVLGLHPGEVM 190 (254)
T ss_dssp ----------------------CCCHH------------------------HHTC--CTTSHHHHHHHHHHTTCCGGGEE
T ss_pred ----------------------EEEcC------------------------cCCC--CCCCHHHHHHHHHHcCCChHHEE
Confidence 00000 0000 11122233333222 346799
Q ss_pred EecCCCCChhhhhhcCeeEEecCccc---h----h--hhhhcceeccchHhHHHHHHhh
Q 001335 856 SIGDGANDVSMIQAAHIGVGISGQEG---M----Q--AVMASDFAIAQFRFLTDLLLVH 905 (1097)
Q Consensus 856 aiGDG~ND~~ml~~AdvGIam~g~e~---~----~--a~~~AD~vi~~~~~l~~lll~~ 905 (1097)
+|||+.||+.|.+.|++++++-+... . . .+..+|+++.++.-+..+|..+
T Consensus 191 ~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~~ 249 (254)
T 3umg_A 191 LAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRAG 249 (254)
T ss_dssp EEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHHC
T ss_pred EEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcCC
Confidence 99999999999999999998843211 0 0 2567899999998888775433
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00066 Score=70.58 Aligned_cols=51 Identities=24% Similarity=0.322 Sum_probs=36.7
Q ss_pred CceEEEecCCCCChhhhhhcCee--EEe-cCccc-hhhhhhcceeccchHhHHHH
Q 001335 851 RKITLSIGDGANDVSMIQAAHIG--VGI-SGQEG-MQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 851 ~~~vlaiGDG~ND~~ml~~AdvG--Iam-~g~e~-~~a~~~AD~vi~~~~~l~~l 901 (1097)
...+++|||+.||+.|.+.|++. |++ .|... ......+|+++.+..-+..+
T Consensus 148 ~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~ 202 (211)
T 2gmw_A 148 MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 202 (211)
T ss_dssp GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred HHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHH
Confidence 45689999999999999999974 555 23221 11234689999887776665
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0011 Score=70.78 Aligned_cols=39 Identities=15% Similarity=0.212 Sum_probs=35.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|+ |+++.++|+.....+..+.+.+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999999888888888874
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0033 Score=67.65 Aligned_cols=43 Identities=12% Similarity=0.122 Sum_probs=35.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCCcc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTG---DKMETAINIAYACNLIN 740 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gi~~ 740 (1097)
+++-++++++|++|+++|++++++|| +..........++|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 34456899999999999999999988 67777777888888854
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0032 Score=67.01 Aligned_cols=40 Identities=15% Similarity=0.180 Sum_probs=34.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|+ .|+++.++|+.....+......+|+.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~ 151 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLS 151 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcH
Confidence 56899999999999 99999999999887777777777663
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00059 Score=72.67 Aligned_cols=119 Identities=11% Similarity=0.011 Sum_probs=79.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+.- .. ++
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f---~~-~~------------------------------ 164 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW---DM-LL------------------------------ 164 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC---SE-EC------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc---ce-EE------------------------------
Confidence 5679999999999985 9999999999888888888888730 00 00
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITL 855 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vl 855 (1097)
.+.. + -..+-|..+++.+.+. ....++
T Consensus 165 ------------------------~~~~-----------------------~---~~~kp~~~~~~~~~~~lgi~~~~~~ 194 (254)
T 3umc_A 165 ------------------------CADL-----------------------F---GHYKPDPQVYLGACRLLDLPPQEVM 194 (254)
T ss_dssp ------------------------CHHH-----------------------H---TCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred ------------------------eecc-----------------------c---ccCCCCHHHHHHHHHHcCCChHHEE
Confidence 0000 0 0011223333322221 346799
Q ss_pred EecCCCCChhhhhhcCeeEEecCc---cc----hhh--hhhcceeccchHhHHHHH
Q 001335 856 SIGDGANDVSMIQAAHIGVGISGQ---EG----MQA--VMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 856 aiGDG~ND~~ml~~AdvGIam~g~---e~----~~a--~~~AD~vi~~~~~l~~ll 902 (1097)
+|||+.||+.|.+.|+++++|-+. .+ ... +..+|+++.++.-+..+|
T Consensus 195 ~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 195 LCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp EEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred EEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 999999999999999999988431 01 112 567999999988877663
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00074 Score=68.36 Aligned_cols=39 Identities=18% Similarity=0.320 Sum_probs=32.2
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
+.+++.+.++.|++.|++++++|+... .+....+.+|+.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~ 121 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIA 121 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCG
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCH
Confidence 689999999999999999999998764 456666666663
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00083 Score=72.93 Aligned_cols=41 Identities=15% Similarity=-0.066 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARA-GIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.+.+++.+.++.|++. |+++.++|+.....+....+.+|+.
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~ 155 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK 155 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4679999999999999 9999999999988888887777763
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.018 Score=61.48 Aligned_cols=40 Identities=13% Similarity=0.116 Sum_probs=35.9
Q ss_pred cCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCc
Q 001335 700 LQEGVPACIETLARAGIKIWVLT---GDKMETAINIAYACNLI 739 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 739 (1097)
+-+++.++++.+++.|++++++| |+....+.....++|+-
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66889999999999999999999 99999888888888874
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00081 Score=70.63 Aligned_cols=52 Identities=12% Similarity=0.041 Sum_probs=39.8
Q ss_pred cCceEEEecCCC-CChhhhhhcCeeEEecCcc----------chhhhhhcceeccchHhHHHH
Q 001335 850 ARKITLSIGDGA-NDVSMIQAAHIGVGISGQE----------GMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 850 ~~~~vlaiGDG~-ND~~ml~~AdvGIam~g~e----------~~~a~~~AD~vi~~~~~l~~l 901 (1097)
....+++|||+. ||+.|.+.|++++++-+.. ....+..+|+++.+..-+..+
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~ 233 (240)
T 3smv_A 171 EKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEA 233 (240)
T ss_dssp CGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHH
T ss_pred CchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHH
Confidence 346799999996 9999999999999883221 111347899999998776665
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00077 Score=72.63 Aligned_cols=124 Identities=10% Similarity=0.061 Sum_probs=78.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|++.|+++.++|+... .+..+.+.+|+...-...
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~~--------------------------------- 151 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDFV--------------------------------- 151 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSCE---------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhEE---------------------------------
Confidence 5789999999999999999999999665 467777788874321100
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
+.+... -...-.|.--..+.+.+.- ....+++||
T Consensus 152 -----------------------~~~~~~----------------------~~~Kp~~~~~~~~~~~~g~-~~~~~~~vG 185 (263)
T 3k1z_A 152 -----------------------LTSEAA----------------------GWPKPDPRIFQEALRLAHM-EPVVAAHVG 185 (263)
T ss_dssp -----------------------EEHHHH----------------------SSCTTSHHHHHHHHHHHTC-CGGGEEEEE
T ss_pred -----------------------Eeeccc----------------------CCCCCCHHHHHHHHHHcCC-CHHHEEEEC
Confidence 000000 0000011112233333332 346799999
Q ss_pred CCC-CChhhhhhcCeeEEecCccc--hh---hhhhcceeccchHhHHHHH
Q 001335 859 DGA-NDVSMIQAAHIGVGISGQEG--MQ---AVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 859 DG~-ND~~ml~~AdvGIam~g~e~--~~---a~~~AD~vi~~~~~l~~ll 902 (1097)
|+. ||+.|.+.|++++.+-+... .. ....+|+++.+..-+..+|
T Consensus 186 D~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 186 DNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp SCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred CCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 997 99999999999987733221 11 1236999999988877664
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0053 Score=62.37 Aligned_cols=42 Identities=17% Similarity=0.281 Sum_probs=37.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCCh---hhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKM---ETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~---~ta~~ia~~~gi~~ 740 (1097)
++.+++.++++.|+++|+++.++|+... ..+..+.+.+|+..
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~ 78 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIID 78 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchh
Confidence 6889999999999999999999998876 78888888888843
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.01 Score=63.87 Aligned_cols=45 Identities=11% Similarity=0.009 Sum_probs=37.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCCccC
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTG---DKMETAINIAYACNLINN 741 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gi~~~ 741 (1097)
.+++-++++++|++++++|++++++|| +...........+|+...
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 455667899999999999999999999 677777777788888543
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0028 Score=66.12 Aligned_cols=53 Identities=19% Similarity=0.219 Sum_probs=39.6
Q ss_pred cCceEEEecCCC-CChhhhhhcCeeEEe--cCccchhhhhhcceeccchHhHHHHH
Q 001335 850 ARKITLSIGDGA-NDVSMIQAAHIGVGI--SGQEGMQAVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 850 ~~~~vlaiGDG~-ND~~ml~~AdvGIam--~g~e~~~a~~~AD~vi~~~~~l~~ll 902 (1097)
....+++|||+. ||+.|.+.|++++.+ .+.........+|+++.++.-+..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 171 DASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred CchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 346799999998 999999999998866 22221112567899999988877663
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0017 Score=67.71 Aligned_cols=41 Identities=22% Similarity=0.234 Sum_probs=33.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCCh---------------hhHHHHHHHcCC
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKM---------------ETAINIAYACNL 738 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~---------------~ta~~ia~~~gi 738 (1097)
.++.+++.++|+.|+++|+++.++|+... ..+..+.+.+|+
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 110 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV 110 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999987 455555666665
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.004 Score=67.12 Aligned_cols=42 Identities=17% Similarity=0.124 Sum_probs=38.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLT---GDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 739 (1097)
+++-+++.++|++|+++|++++++| |+.........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5677899999999999999999999 88988888888888874
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.34 E-value=0.01 Score=63.81 Aligned_cols=42 Identities=19% Similarity=0.225 Sum_probs=36.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCccC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLT---GDKMETAINIAYACNLINN 741 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~~~ 741 (1097)
.+ ++++++|++++++|++++++| |+..........++|+...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 44 899999999999999999999 8888888888889998543
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0092 Score=64.02 Aligned_cols=41 Identities=22% Similarity=0.328 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.+++.++++.|++ ++++.++|+.....+..+...+|+..
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~ 161 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS 161 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHh
Confidence 577999999999998 59999999999888888888888743
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.002 Score=65.78 Aligned_cols=40 Identities=13% Similarity=0.062 Sum_probs=35.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.+.++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 47799999999999999 99999999988888888888874
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.013 Score=62.01 Aligned_cols=43 Identities=5% Similarity=0.097 Sum_probs=36.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChh----hHHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKME----TAINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~----ta~~ia~~~gi~ 739 (1097)
+.++.|++.+.++.|+++|+++.++||+... .+..-.+++||-
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 4689999999999999999999999999764 556666777874
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.002 Score=66.42 Aligned_cols=36 Identities=8% Similarity=0.082 Sum_probs=30.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 735 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 735 (1097)
++.+++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 567899999999999 999999999887777666655
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=95.93 E-value=0.017 Score=59.61 Aligned_cols=42 Identities=21% Similarity=0.206 Sum_probs=38.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.|++.++++.|++.|+++.++|+.....+....+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999999998854
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.92 E-value=0.03 Score=58.71 Aligned_cols=41 Identities=12% Similarity=0.133 Sum_probs=32.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLT---GDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 739 (1097)
+.-+.+.++++.|++.|++++++| |+..........+.|+.
T Consensus 19 ~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 19 VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred EeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 334455889999999999999999 88888777777777763
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=95.77 E-value=0.0015 Score=62.20 Aligned_cols=42 Identities=12% Similarity=0.045 Sum_probs=35.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.++.|++.++++.|+++|+++.++|+.....+..+.+.+|+.
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~ 58 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence 356788999999999999999999999888877777777663
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.56 E-value=0.029 Score=57.26 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=30.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIA 733 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia 733 (1097)
++.+++.++++.|+++|+++.++||.....+..+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 57899999999999999999999998877664433
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=95.43 E-value=0.019 Score=64.98 Aligned_cols=42 Identities=17% Similarity=0.213 Sum_probs=38.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.||+.++++.|+++|+++.++|+.....+..+....|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999999998888888854
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.38 E-value=0.02 Score=60.79 Aligned_cols=43 Identities=12% Similarity=0.069 Sum_probs=35.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChh----hHHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKME----TAINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~----ta~~ia~~~gi~ 739 (1097)
++++.|++.+.++.|+++|+++.++||+... .+..-.+.+||-
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 4689999999999999999999999999763 555556677774
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.12 Score=51.87 Aligned_cols=51 Identities=18% Similarity=0.197 Sum_probs=35.2
Q ss_pred EecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhc
Q 001335 607 CKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEK 686 (1097)
Q Consensus 607 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~ 686 (1097)
.-|..+.|.+.--. ..+...+.+.++..+|..++.+|.
T Consensus 135 ~iGn~~~m~~~gi~----i~~~~~~~~~~~~~~G~T~V~vai-------------------------------------- 172 (185)
T 2kmv_A 135 LIGNREWMIRNGLV----INNDVNDFMTEHERKGRTAVLVAV-------------------------------------- 172 (185)
T ss_dssp EEECHHHHHHHTCC----CCHHHHHHHHHHHHTTCEEEEEEE--------------------------------------
T ss_pred EECCHHHHHHcCCC----CCHHHHHHHHHHHhCCCeEEEEEE--------------------------------------
Confidence 34998777542111 222344556777889998888885
Q ss_pred CceEEEEeeeccc
Q 001335 687 DLTLIGCTAIEDK 699 (1097)
Q Consensus 687 ~l~llG~~~ieD~ 699 (1097)
|-.++|++++.|+
T Consensus 173 dg~l~g~iavaD~ 185 (185)
T 2kmv_A 173 DDELCGLIAIADT 185 (185)
T ss_dssp TTEEEEEEEEECC
T ss_pred CCEEEEEEEEEcC
Confidence 5689999999985
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.049 Score=56.38 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=34.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|+++|+++.++|+... .+..+.+.+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 6789999999999999999999999866 467777777774
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=95.18 E-value=0.0017 Score=66.63 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=26.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMET 728 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 728 (1097)
++.+++.++++.|++.|++++++|+.....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 578999999999999999999999965444
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=94.94 E-value=0.032 Score=59.29 Aligned_cols=118 Identities=16% Similarity=0.201 Sum_probs=75.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHH
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVK 776 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1097)
..++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-..
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~-------------------------------- 159 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF-------------------------------- 159 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--------------------------------
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--------------------------------
Confidence 34678999999999999999999887754 45667777887532110
Q ss_pred HHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEE
Q 001335 777 RELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLS 856 (1097)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vla 856 (1097)
++.+.... ...=.|+-=..+.+.+.- ....+++
T Consensus 160 ------------------------i~~~~~~~----------------------~~KP~p~~~~~a~~~lg~-~p~e~l~ 192 (250)
T 4gib_A 160 ------------------------IADAGKCK----------------------NNKPHPEIFLMSAKGLNV-NPQNCIG 192 (250)
T ss_dssp ------------------------ECCGGGCC----------------------SCTTSSHHHHHHHHHHTC-CGGGEEE
T ss_pred ------------------------eecccccC----------------------CCCCcHHHHHHHHHHhCC-ChHHeEE
Confidence 11111000 000012222233344433 3467999
Q ss_pred ecCCCCChhhhhhcCe-eEEecCccchhhhhhcceeccchHhH
Q 001335 857 IGDGANDVSMIQAAHI-GVGISGQEGMQAVMASDFAIAQFRFL 898 (1097)
Q Consensus 857 iGDG~ND~~ml~~Adv-GIam~g~e~~~a~~~AD~vi~~~~~l 898 (1097)
|||..+|+.+=++||+ .|++.+.+. ...||+++.++.-|
T Consensus 193 VGDs~~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL 232 (250)
T 4gib_A 193 IEDASAGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQL 232 (250)
T ss_dssp EESSHHHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGC
T ss_pred ECCCHHHHHHHHHcCCEEEEECChhH---hccCCEEECChHhC
Confidence 9999999999999998 667755443 34689999887654
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.67 E-value=0.037 Score=59.10 Aligned_cols=43 Identities=14% Similarity=0.181 Sum_probs=34.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhh---HHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMET---AINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~t---a~~ia~~~gi~ 739 (1097)
+.++-|++.++|+.|++.|+++.++||+.... +......+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 35788999999999999999999999998443 34444566764
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=94.60 E-value=0.54 Score=49.46 Aligned_cols=63 Identities=16% Similarity=0.152 Sum_probs=41.2
Q ss_pred HHHHHHHHHccc---CceEEEecCCC-CChhhhhhcCee-EEe-cCcc-chhh---hhhcceeccchHhHHHH
Q 001335 839 KAQVTSLVKKGA---RKITLSIGDGA-NDVSMIQAAHIG-VGI-SGQE-GMQA---VMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 839 K~~iv~~lk~~~---~~~vlaiGDG~-ND~~ml~~AdvG-Iam-~g~e-~~~a---~~~AD~vi~~~~~l~~l 901 (1097)
|..+.+.+.+.. ...+++|||+. ||+.|.+.|++. |.+ .|.. ..+. ...+|+++.+..-+..+
T Consensus 181 ~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~ 253 (259)
T 2ho4_A 181 EKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDH 253 (259)
T ss_dssp SHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHH
T ss_pred CHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHH
Confidence 455555544332 35799999998 999999999984 455 3321 1111 24589998887766554
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=94.52 E-value=0.17 Score=55.42 Aligned_cols=43 Identities=19% Similarity=0.155 Sum_probs=36.0
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLT---GDKMETAINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 739 (1097)
.+++-+++.++|++|+++|++++++| |+.........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45677899999999999999999999 57777776777777774
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=94.41 E-value=0.017 Score=60.33 Aligned_cols=35 Identities=6% Similarity=-0.034 Sum_probs=30.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAY 734 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~ 734 (1097)
++.+++.++++.|++. +++.++|+.....+..+.+
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~ 146 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCK 146 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHh
Confidence 4668999999999999 9999999998888776653
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=94.25 E-value=0.03 Score=61.94 Aligned_cols=42 Identities=17% Similarity=0.223 Sum_probs=38.0
Q ss_pred eeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001335 695 AIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 736 (1097)
Q Consensus 695 ~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 736 (1097)
.....+.++..+.++.|+++|++|||+||-...-+..+|..+
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 344468899999999999999999999999999999999886
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=93.86 E-value=0.018 Score=57.66 Aligned_cols=41 Identities=20% Similarity=0.275 Sum_probs=34.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC---------------ChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGD---------------KMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD---------------~~~ta~~ia~~~gi~ 739 (1097)
++.|++.++|+.|+++|++++++|+. ....+..+.+..|+.
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 57899999999999999999999997 355566677777763
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=93.85 E-value=0.11 Score=54.09 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=35.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 738 (1097)
-++.|++.++++.|+++| ++.++|+.....+..+.+.+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368999999999999999 9999999988888888887776
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=93.43 E-value=0.075 Score=58.13 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=28.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMET 728 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 728 (1097)
++++.+++.++++.|+++|+++.++||.....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 56788999999999999999999999998553
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=91.32 E-value=0.31 Score=51.95 Aligned_cols=39 Identities=13% Similarity=0.249 Sum_probs=33.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 736 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 736 (1097)
-++.+++.++++.|+++|+++.++|+-....+..+-+.+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~ 167 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 167 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence 468899999999999999999999999888777665543
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=90.56 E-value=0.34 Score=50.91 Aligned_cols=41 Identities=17% Similarity=0.146 Sum_probs=33.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
.++.+++.+.++.|+++|+++.++|+... +..+-..+|+..
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~ 134 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE 134 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc
Confidence 46789999999999999999999998653 455566777743
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=89.25 E-value=0.36 Score=46.00 Aligned_cols=40 Identities=13% Similarity=0.065 Sum_probs=34.0
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCC---hhhHHHHHHHcCCc
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDK---METAINIAYACNLI 739 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~---~~ta~~ia~~~gi~ 739 (1097)
+-+++.++|++|+++|++++++|||. ...+.....+.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45789999999999999999999998 56667777788773
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=88.72 E-value=2.9 Score=40.88 Aligned_cols=36 Identities=8% Similarity=0.128 Sum_probs=22.3
Q ss_pred cchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEE
Q 001335 609 GADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAY 648 (1097)
Q Consensus 609 Ga~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~ 648 (1097)
|....|-+.--. ......+.+..+..+|..++.+|.
T Consensus 118 Gn~~~m~~~gi~----~~~~~~~~~~~~~~~G~T~v~va~ 153 (165)
T 2arf_A 118 GNREWLRRNGLT----ISSDVSDAMTDHEMKGQTAILVAI 153 (165)
T ss_dssp ECHHHHHHHHCS----SCHHHHHHHHHHHTTTSEEEEEEE
T ss_pred cCHHHHHhcCCC----CCHHHHHHHHHHHhCCCeEEEEEE
Confidence 988776442111 122344556677789998888885
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=86.19 E-value=0.33 Score=49.94 Aligned_cols=29 Identities=24% Similarity=0.275 Sum_probs=25.5
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKMET 728 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 728 (1097)
+.+++.++++.|+++|+++.++||.....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 46789999999999999999999987543
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=86.11 E-value=3.9 Score=42.97 Aligned_cols=42 Identities=10% Similarity=0.142 Sum_probs=34.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH----cCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA----CNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~----~gi~ 739 (1097)
++.-+++.++++.+++.|+++.++||+...+...++.. +|+.
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 34446888999999999999999999998887777665 7764
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=82.17 E-value=0.38 Score=52.32 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=27.4
Q ss_pred ccCCCCceeccCcccccc---------ccceEEEecCCCceeecce
Q 001335 401 AESNTPASARTSNLNEEL---------GQVEYIFSDKTGTLTRNLM 437 (1097)
Q Consensus 401 ~~~~~~~~~r~~~~~e~L---------G~v~~i~~DKTGTLT~n~m 437 (1097)
+-.+.++++|++..+|++ .++. |+||||||||+...
T Consensus 15 ~l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 15 EFQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GGTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HHhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 337788999999998873 3344 67799999997644
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1097 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 6e-30 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 8e-22 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-14 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-08 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 5e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-04 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-04 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 6e-04 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 0.003 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 116 bits (292), Expect = 6e-30
Identities = 41/231 (17%), Positives = 71/231 (30%), Gaps = 35/231 (15%)
Query: 482 GFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALV 541
+ + L D E A+C+ + +E+ + + + E AL
Sbjct: 28 TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNET-KGVYEKVGEATETALT 86
Query: 542 TAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADG 601
T + F R + + + + LEF+ RK SV C A
Sbjct: 87 TLVEKMNVFNTEVRNLSKVERANACNSVIRQL---MKKEFTLEFSRDRKSMSVYCSPAKS 143
Query: 602 -----RLVLYCKGADSVIYERLANG---------NEDLKKVTREHLEQFGSS--GLRTLC 645
++ KGA + +R +K+ ++++G+ LR L
Sbjct: 144 SRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLA 203
Query: 646 LAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAI 696
LA RD P E + E DLT +G +
Sbjct: 204 LATRDTPPKREEMVLDD---------------SSRFMEYETDLTFVGVVGM 239
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 93.0 bits (230), Expect = 8e-22
Identities = 31/214 (14%), Positives = 61/214 (28%), Gaps = 46/214 (21%)
Query: 498 EHNPDACKEFFRCLAICHTVLPEGDESPERITYQAA--SPDEAALVTAAKNFGFFFYRRT 555
+ R +C+ + + + ++ + E+AL+ +
Sbjct: 28 DKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG------ 81
Query: 556 PTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCR--YADGRLVLYCKGADSV 613
V KM + + FNST K Q + VL KGA
Sbjct: 82 ---------SVRKMRD----RNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPER 128
Query: 614 IYERLANGNEDLKKV---------TREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFI 664
I +R ++ K++ + + G G R L +L + R +
Sbjct: 129 ILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK--- 185
Query: 665 QAKSSLRDREQKLDEVAELIEKDLTLIGCTAIED 698
+ + L +G ++ D
Sbjct: 186 -----------FDTDELNFPTEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 74.5 bits (182), Expect = 2e-14
Identities = 49/497 (9%), Positives = 98/497 (19%), Gaps = 165/497 (33%)
Query: 416 EELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSV 475
LG +I + + R+
Sbjct: 34 CYLGLHSHIDWETLTDNDIQDI-----------------------------------RNR 58
Query: 476 KAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASP 535
+K N L W + + H + I + +
Sbjct: 59 IFQKDKILNKLKSLGLNSNW----------DMLFIVFSIHLI---------DILKKLSHD 99
Query: 536 DEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVV 595
+ A + + + + L + V
Sbjct: 100 EIEAFMYQDEPVELKL---------------QNISTN----LADCFNLNEQLPLQFLDNV 140
Query: 596 CRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDM 655
+ + A L + L + + L + L +
Sbjct: 141 KVGKNNIYAALEEFAT----TELHVSDATLFSL-KGALWTLAQEVYQEWYLGSKLY---- 191
Query: 656 YERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQ--EGVPACIETLAR 713
++V + I + G E L+ + V + L
Sbjct: 192 ----------------------EDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKG 229
Query: 714 AGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMRE 773
AG ++ + TG + L+ FI T+
Sbjct: 230 AGFELGIATGRPYTETVVPFENLGLLPYFEADFIATAS---------------------- 267
Query: 774 EVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR 833
+ L P+ + L
Sbjct: 268 ----------------------DVLEAENMYPQARPLGKPNPFSYIAAL-------YGNN 298
Query: 834 VSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAH---IGV--GISGQEGMQAVMAS 888
+ + +GD D+ Q IG G+ G++ + A
Sbjct: 299 RDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAH 357
Query: 889 --DFAIAQFRFLTDLLL 903
D+ I L +L
Sbjct: 358 HADYVINHLGELRGVLD 374
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 52.5 bits (125), Expect = 2e-08
Identities = 42/215 (19%), Positives = 68/215 (31%), Gaps = 60/215 (27%)
Query: 683 LIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNE 742
+I D T T D ++ V I+ AGI++ ++TGD TAI I
Sbjct: 4 VICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC--------- 54
Query: 743 MKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALII 802
++ I E + D G + Q+
Sbjct: 55 -RRIGIFGENEEVADRAYTGRE--------------FDDLPLAEQREAC----------- 88
Query: 803 DGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGAN 862
+ RV P K+++ ++ +IT GDG N
Sbjct: 89 -----------------------RRACCFARVEPSHKSKIVEYLQSY-DEITAMTGDGVN 124
Query: 863 DVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 897
D ++ A IG+ + G A AS+ +A F
Sbjct: 125 DAPALKKAEIGIAM-GSGTAVAKTASEMVLADDNF 158
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 45.1 bits (106), Expect = 5e-06
Identities = 18/68 (26%), Positives = 28/68 (41%)
Query: 679 EVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738
E + D T D L+E ++ L R GIK+ ++TGD +A I+ NL
Sbjct: 1 EKVTAVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 60
Query: 739 INNEMKQF 746
+
Sbjct: 61 DLVIAEVL 68
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 41.9 bits (97), Expect = 2e-04
Identities = 26/189 (13%), Positives = 57/189 (30%), Gaps = 6/189 (3%)
Query: 686 KDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQ 745
D T+ + E I GI I ++TG+ ++ A + + +
Sbjct: 9 IDGTITY---PNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAE 65
Query: 746 FIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGK 805
R D I + + + + + +
Sbjct: 66 DGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVR 125
Query: 806 CLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVS 865
++ L+ +L + +++ + S ++KA +K K +GDG ND+
Sbjct: 126 EIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIK---PKEVAHVGDGENDLD 182
Query: 866 MIQAAHIGV 874
+ V
Sbjct: 183 AFKVVGYKV 191
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (94), Expect = 5e-04
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 842 VTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVM-ASDFAIAQFRFL 898
+ L +K K + IGDGA D+ A +G G Q V + + I F L
Sbjct: 158 IKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 40.3 bits (93), Expect = 6e-04
Identities = 21/193 (10%), Positives = 52/193 (26%), Gaps = 18/193 (9%)
Query: 687 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQF 746
D L + + I + + G+ + +L+G+ + + +
Sbjct: 11 DGNLTD---RDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGI-----NGP 62
Query: 747 IITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKC 806
+ + D + I +F E + + + + ++
Sbjct: 63 VFGENGGIMFDNDG-----SIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDI 117
Query: 807 LMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKI-----TLSIGDGA 861
+D + + S + + + ++ K L IGD
Sbjct: 118 DPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177
Query: 862 NDVSMIQAAHIGV 874
ND+ M Q
Sbjct: 178 NDMPMFQLPVRKA 190
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 38.5 bits (88), Expect = 0.003
Identities = 33/201 (16%), Positives = 63/201 (31%), Gaps = 23/201 (11%)
Query: 687 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQF 746
D T +G + LQE R + TG +A + L+ +
Sbjct: 11 DNTWVGDQQALEHLQE-----YLGDRRGNFYLAYATGRSYHSARELQKQVGLMEP---DY 62
Query: 747 IITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKC 806
+T+ + I E G A ++ E +R++ + I + + + S +
Sbjct: 63 WLTAVGSEIYHPE--GLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKISYH 120
Query: 807 LMYALDPSLRVILLNLSLNCSS-------------VVCCRVSPLQKAQVTSLVKKGARKI 853
L P++ L + ++ R + Q
Sbjct: 121 LDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQ 180
Query: 854 TLSIGDGANDVSMIQAAHIGV 874
TL GD ND+ + + + GV
Sbjct: 181 TLVCGDSGNDIGLFETSARGV 201
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1097 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.93 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.9 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.88 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.85 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.84 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.81 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.22 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.02 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.97 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 98.94 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.93 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.91 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.9 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.89 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.87 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.79 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.76 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.72 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.69 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.66 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.53 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.52 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.39 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.38 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.31 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.21 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.94 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.14 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.07 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.97 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.68 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.65 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.62 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.59 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.37 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.11 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.75 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.73 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 95.67 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.37 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.34 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 94.97 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 94.74 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 94.08 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 93.72 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 92.96 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 92.74 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 92.5 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 91.94 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 91.52 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 91.28 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 86.59 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 82.79 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 82.5 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 80.84 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.93 E-value=1.2e-26 Score=230.38 Aligned_cols=148 Identities=26% Similarity=0.338 Sum_probs=116.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
||+|++++++|+.|+++||++||+|||+..||.++|+++||+.++.... .
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~----------~-------------------- 68 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA----------D-------------------- 68 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCT----------T--------------------
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccc----------c--------------------
Confidence 9999999999999999999999999999999999999999987653210 0
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEe
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 857 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlai 857 (1097)
..++|..+......+..+...+. .+|+|++|+||..+++.+|+ .|++|+|+
T Consensus 69 ----------------------~~~~~~~~~~~~~~~~~~~~~~~------~v~ar~~p~~K~~lv~~l~~-~g~~Va~v 119 (168)
T d1wpga2 69 ----------------------RAYTGREFDDLPLAEQREACRRA------CCFARVEPSHKSKIVEYLQS-YDEITAMT 119 (168)
T ss_dssp ----------------------TEEEHHHHHHSCHHHHHHHHHHC------CEEESCCHHHHHHHHHHHHH-TTCCEEEE
T ss_pred ----------------------ccccccccchhhHHHHhhhhhhh------hhhhccchhHHHHHHHHHHh-cccceeEE
Confidence 02333333333333333333332 39999999999999999999 79999999
Q ss_pred cCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHhHHHH-HHhhh
Q 001335 858 GDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRFLTDL-LLVHG 906 (1097)
Q Consensus 858 GDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~l~~l-ll~~G 906 (1097)
|||.||++||++|||||+|+ |++. |+++||+++.+.++...+ ++.+|
T Consensus 120 GDG~nD~~AL~~AdvGIa~~~gt~~--a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 120 GDGVNDAPALKKAEIGIAMGSGTAV--AKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp ECSGGGHHHHHHSSEEEEETTSCHH--HHHTCSEEETTCCTHHHHHHHHHH
T ss_pred ecCCCCHHHHHhCCEEEEeccccHH--HHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999994 3333 899999999997773332 36665
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.90 E-value=1.3e-25 Score=234.51 Aligned_cols=171 Identities=17% Similarity=0.189 Sum_probs=123.0
Q ss_pred ChhHHHHHHHHhhcccceEeccCCCCCc--eEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEE
Q 001335 500 NPDACKEFFRCLAICHTVLPEGDESPER--ITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCY 577 (1097)
Q Consensus 500 ~~~~~~~~~~~lalc~~~~~~~~~~~~~--~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~ 577 (1097)
.++..+.+++++++||++....++.... -....|+|+|.||+.+|.+.|..... ....|
T Consensus 30 ~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~-------------------~r~~~ 90 (214)
T d1q3ia_ 30 RSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK-------------------MRDRN 90 (214)
T ss_dssp CSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHH-------------------HHHTS
T ss_pred CCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHH-------------------HHhhC
Confidence 3446678999999999997654332111 01125899999999999987764321 13456
Q ss_pred EEeEeecCCCCCceEEEEEEec--CCcEEEEEecchhHHHHHhhc---------CchhHHHHHHHHHHHHHhcCCeEEEE
Q 001335 578 EILNVLEFNSTRKRQSVVCRYA--DGRLVLYCKGADSVIYERLAN---------GNEDLKKVTREHLEQFGSSGLRTLCL 646 (1097)
Q Consensus 578 ~il~~~~F~s~rkrmsviv~~~--~~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~l~~~a~~GlR~l~~ 646 (1097)
+++..+||+|+||||+++++.+ ++++++|+|||||.|+++|+. .+.+.++.+.+.+++|+.+|+|||++
T Consensus 91 ~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~ 170 (214)
T d1q3ia_ 91 PKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGF 170 (214)
T ss_dssp CEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEE
Confidence 7889999999999999999975 467899999999999999974 23457888999999999999999999
Q ss_pred EEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCC
Q 001335 647 AYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEG 703 (1097)
Q Consensus 647 A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~ 703 (1097)
|||+++.+++..|... +. +..+.+|+||+|+|++||+||+|+.
T Consensus 171 A~k~l~~~~~~~~~~~---------~~-----~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 171 CQLNLPSGKFPRGFKF---------DT-----DELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEEEECTTTSCTTCCC---------CT-----TTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EEEecCcccccccccc---------Ch-----hhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 9999998765543211 00 0124568899999999999999975
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=1.4e-23 Score=199.56 Aligned_cols=120 Identities=27% Similarity=0.374 Sum_probs=101.5
Q ss_pred CceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHH
Q 001335 687 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE 766 (1097)
Q Consensus 687 ~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 766 (1097)
|.+..+.++++|++|++++++|+.|+++||++||+|||+.++|.++|++|||-.
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~-------------------------- 62 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-------------------------- 62 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------
T ss_pred CCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh--------------------------
Confidence 445566899999999999999999999999999999999999999999999821
Q ss_pred HHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHH
Q 001335 767 IARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLV 846 (1097)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~l 846 (1097)
++++++|++|..+++.+
T Consensus 63 ---------------------------------------------------------------v~~~~~p~~k~~~v~~~ 79 (135)
T d2b8ea1 63 ---------------------------------------------------------------VIAEVLPHQKSEEVKKL 79 (135)
T ss_dssp ---------------------------------------------------------------EECSCCHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------hccccchhHHHHHHHHH
Confidence 88999999999999999
Q ss_pred HcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhH
Q 001335 847 KKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFL 898 (1097)
Q Consensus 847 k~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l 898 (1097)
|+ ++.|+|+|||.||++||++||+||+|.+... .++++||+++.+.++.
T Consensus 80 q~--~~~v~~vGDg~nD~~aL~~Advgia~~~~~~-~~~~aADivl~~~~l~ 128 (135)
T d2b8ea1 80 QA--KEVVAFVGDGINDAPALAQADLGIAVGSGSD-VAVESGDIVLIRDDLR 128 (135)
T ss_dssp TT--TSCEEEEECSSSSHHHHHHSSEEEEECCC---------SEEESSCCTH
T ss_pred Hc--CCEEEEEeCCCCcHHHHHhCCeeeecCccCH-HHHHhCCEEEECCCHH
Confidence 86 5799999999999999999999999954332 2899999999987663
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.85 E-value=4.7e-27 Score=267.87 Aligned_cols=333 Identities=12% Similarity=-0.005 Sum_probs=211.3
Q ss_pred cccccccceEEEecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhc
Q 001335 414 LNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRG 493 (1097)
Q Consensus 414 ~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 493 (1097)
..|.||...++|+|||||+|.|.|+++.+..+ .+...
T Consensus 32 s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~-------------------------------------------~il~~ 68 (380)
T d1qyia_ 32 DKCYLGLHSHIDWETLTDNDIQDIRNRIFQKD-------------------------------------------KILNK 68 (380)
T ss_dssp CTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTT-------------------------------------------HHHHH
T ss_pred chhhcccceeeecCcccchhhhhheeeeecch-------------------------------------------hhhHh
Confidence 34789999999999999999999976432100 00000
Q ss_pred ccCCCCChhHHHHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCcee
Q 001335 494 AWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQ 573 (1097)
Q Consensus 494 ~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~ 573 (1097)
......++ --++....++||.+.... ..++|++.+++..++..+..+.. .
T Consensus 69 ~k~~g~n~--~~dl~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-------------------~ 118 (380)
T d1qyia_ 69 LKSLGLNS--NWDMLFIVFSIHLIDILK---------KLSHDEIEAFMYQDEPVELKLQN-------------------I 118 (380)
T ss_dssp HHHTTCCC--HHHHHHHHHHHHHHHHHT---------TSCHHHHHHHHHCSSCHHHHHTT-------------------S
T ss_pred hhhcCCCh--hHHHHHHHHHHHHHHHHh---------hcCCCcHHHHHHHHhhccchHHH-------------------H
Confidence 00000011 113455566677553221 13678888888765433221110 0
Q ss_pred eEEEEEeEeecCCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCH
Q 001335 574 DVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSP 653 (1097)
Q Consensus 574 ~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~ 653 (1097)
...+.....+||++.+|+|+++....++.+.++.||+++.+. ... .....+...+..++.+|+|++++|++..++
T Consensus 119 ~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----~~~-~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~ 193 (380)
T d1qyia_ 119 STNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----VSD-ATLFSLKGALWTLAQEVYQEWYLGSKLYED 193 (380)
T ss_dssp GGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----CSC-CGGGSTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----CcH-HHHHHHHhHHHHHHHHHHHHHHHhhhcccc
Confidence 222344556899999999998766555555666677775542 111 123345667889999999999998764432
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCC--ChHHHHHHHHHcCCeEEEEcCCChhhHHH
Q 001335 654 DMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQE--GVPACIETLARAGIKIWVLTGDKMETAIN 731 (1097)
Q Consensus 654 ~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~--~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ 731 (1097)
.+ .....+....|++..+|+++| +++++|+.|+++||+++|+|||+..+|..
T Consensus 194 ~~--------------------------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~ 247 (380)
T d1qyia_ 194 VE--------------------------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVV 247 (380)
T ss_dssp HH--------------------------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred cc--------------------------cccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 21 222345667899999999765 99999999999999999999999999999
Q ss_pred HHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhc
Q 001335 732 IAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYAL 811 (1097)
Q Consensus 732 ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l 811 (1097)
+++++||...-....+++.++ +.......... . ..
T Consensus 248 il~~lgl~~~F~~~~i~~~~d----------------------~~~~~~~~~~~----------------------~-~~ 282 (380)
T d1qyia_ 248 PFENLGLLPYFEADFIATASD----------------------VLEAENMYPQA----------------------R-PL 282 (380)
T ss_dssp HHHHHTCGGGSCGGGEECHHH----------------------HHHHHHHSTTS----------------------C-CC
T ss_pred HHHHcCCcccCCcceEEecch----------------------hhhhhhhcccc----------------------c-cc
Confidence 999999975321111111110 00000000000 0 00
Q ss_pred ChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcC---eeEEec--Cccchh--h
Q 001335 812 DPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAH---IGVGIS--GQEGMQ--A 884 (1097)
Q Consensus 812 ~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~Ad---vGIam~--g~e~~~--a 884 (1097)
.+.....+... ..++|.+|.+|..+++.++. .++.|+|+|||.||++|.+.|| |||+|+ |.+..+ .
T Consensus 283 ~KP~p~~~~~~------~~~~~~~~~~k~~iv~~~~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~ 355 (380)
T d1qyia_ 283 GKPNPFSYIAA------LYGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELE 355 (380)
T ss_dssp CTTSTHHHHHH------HHCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHH
T ss_pred cCCChHHHHHH------HHHcCCCHHHHHHHHHHhCC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHH
Confidence 00001122222 26788999999999999988 7889999999999999999999 899773 344311 2
Q ss_pred hhhcceeccchHhHHHHH
Q 001335 885 VMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 885 ~~~AD~vi~~~~~l~~ll 902 (1097)
...||+++.++..+.++|
T Consensus 356 ~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 356 AHHADYVINHLGELRGVL 373 (380)
T ss_dssp HTTCSEEESSGGGHHHHH
T ss_pred hCCCCEEECCHHHHHHHH
Confidence 237999999988887764
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.84 E-value=1.2e-21 Score=207.87 Aligned_cols=177 Identities=23% Similarity=0.250 Sum_probs=126.2
Q ss_pred hhHHHHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEe
Q 001335 501 PDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEIL 580 (1097)
Q Consensus 501 ~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il 580 (1097)
.+.++.++.++++||++....++..+.+ ...++|+|.||+.+|.+.|+.........-... .... .......|+++
T Consensus 47 ~~~l~~ll~~~~LCn~a~l~~~~~~~~~-~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~v 122 (239)
T d1wpga3 47 FDGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNVFNTEVRNLSKVER-ANAC--NSVIRQLMKKE 122 (239)
T ss_dssp CHHHHHHHHHHHHSCSCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHH-TTHH--HHHHHHHEEEE
T ss_pred cHHHHHHHHHHHhcCCCEeeecCCCCeE-EEcCCCCcHHHHHHHHHhCCChHHhhccchhhh-hccc--hhhhhhhCeEE
Confidence 3467889999999999987665544444 356999999999999999975433211000000 0000 00013568999
Q ss_pred EeecCCCCCceEEEEEEecCC-----cEEEEEecchhHHHHHhhc---------CchhHHHHHHHHHHHH--HhcCCeEE
Q 001335 581 NVLEFNSTRKRQSVVCRYADG-----RLVLYCKGADSVIYERLAN---------GNEDLKKVTREHLEQF--GSSGLRTL 644 (1097)
Q Consensus 581 ~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~l~~~--a~~GlR~l 644 (1097)
..+||||+||||||+++.+++ .+.+|+|||||.|+++|+. ...+.++.+.+.++++ |.+|+|||
T Consensus 123 ~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvL 202 (239)
T d1wpga3 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 202 (239)
T ss_dssp EEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred EEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEE
Confidence 999999999999999998654 3789999999999999974 2345677777788876 77999999
Q ss_pred EEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeee
Q 001335 645 CLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAI 696 (1097)
Q Consensus 645 ~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~i 696 (1097)
++|||+++.++...+.. +. ...+.+|+||+|+|++||
T Consensus 203 a~A~k~~~~~~~~~~~~----------~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 203 ALATRDTPPKREEMVLD----------DS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEEESSCCCGGGCCTT----------CG-----GGHHHHTCSEEEEEEEEE
T ss_pred EEEEEECCccccccccc----------ch-----hhHHHhcCCCEEEEEECC
Confidence 99999998654322110 00 013678999999999996
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.81 E-value=1.6e-20 Score=171.84 Aligned_cols=107 Identities=21% Similarity=0.258 Sum_probs=87.4
Q ss_pred eEEEeeCCeE--EEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeecccccccCCCChhh
Q 001335 142 PVEVLQGQRW--VSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWDYLTPEK 219 (1097)
Q Consensus 142 ~~~V~r~g~~--~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~ 219 (1097)
+++|+|+|++ ++|++++|+|||||.|++||.+|||++||.+.+ +.++||||+|||||.|+.|.+.+...
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~--~~l~vdes~lTGEs~pv~K~~~~~~~------- 72 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGESVSVIKHTEPVPD------- 72 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCCEEECHHHHSCCSCEECCCSCCCC-------
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeec--cceEEEEeecccceEEEEeecccccc-------
Confidence 6799999974 789999999999999999999999999997543 22899999999999999998754221
Q ss_pred hccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceee
Q 001335 220 ASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM 285 (1097)
Q Consensus 220 ~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~ 285 (1097)
+.....+..|++++||.+.+ +.++++|++||.+|.+++
T Consensus 73 ---------------------------~~~~~~~~~n~lf~GT~V~~-G~~~~~V~~tG~~T~~G~ 110 (115)
T d1wpga1 73 ---------------------------PRAVNQDKKNMLFSGTNIAA-GKALGIVATTGVSTEIGK 110 (115)
T ss_dssp ---------------------------TTCCGGGCTTEECTTCEEEE-CEEEEEEEECGGGSHHHH
T ss_pred ---------------------------cccccccccceEEeccEEEe-eeEEEEEEEEccccHHHH
Confidence 11223345788888888876 679999999999997654
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.22 E-value=1.3e-12 Score=151.68 Aligned_cols=73 Identities=21% Similarity=0.159 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCC--Cceee
Q 001335 357 FVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKT--GTLTR 434 (1097)
Q Consensus 357 ~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKT--GTLT~ 434 (1097)
+...|..++.+.+.++|++||+.++++.+++ +.+| +++++++|++.++|+||+..++|+||| +|||.
T Consensus 177 ~~~~~~~ai~l~V~~iPEgLp~~vti~La~~-~~rm----------ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~ 245 (472)
T d1wpga4 177 AIYYFKIAVALAVAAIPEGLPAVITTCLALG-TRRM----------AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISS 245 (472)
T ss_dssp GGGHHHHHHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhChhhHHHHHHHHHHHH-HHHH----------HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhh
Confidence 3456788899999999999999999999999 8877 889999999999999999999999998 99999
Q ss_pred cceEEE
Q 001335 435 NLMEFF 440 (1097)
Q Consensus 435 n~m~~~ 440 (1097)
|.+++.
T Consensus 246 n~~~v~ 251 (472)
T d1wpga4 246 NVGEVV 251 (472)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 988764
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.02 E-value=1.1e-10 Score=121.58 Aligned_cols=180 Identities=17% Similarity=0.177 Sum_probs=99.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhc-----ccCCChHHHHHHhHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDV-----EERGDPVEIARFMRE 773 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~-----~~~~~~~~~~~~~~~ 773 (1097)
.+.+.+.++|++|+++|++++++|||....+..+++.+++... .+..++...... ........ ..
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~-----~i~~~g~~~~~~~~~~~~~~~~~~~---~~-- 88 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP-----VVAEDGGAISYKKKRIFLASMDEEW---IL-- 88 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC-----EEEGGGTEEEETTEEEESCCCSHHH---HH--
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcc-----cccccceeeeccccccccccccHHH---HH--
Confidence 4778899999999999999999999999999999999887432 222222211110 00011100 01
Q ss_pred HHHHHHHHHHHhhhhcc-cccCCCeEEEEEcCccchhhcChhHHHHHHhhhc---cCCceEEEEeCc--ccHHHHHHHHH
Q 001335 774 EVKRELNKCIDEAQQYI-HSISGEKLALIIDGKCLMYALDPSLRVILLNLSL---NCSSVVCCRVSP--LQKAQVTSLVK 847 (1097)
Q Consensus 774 ~~~~~~~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~---~~~~vi~~r~sP--~qK~~iv~~lk 847 (1097)
..++........... ............+..... ..++...++.. ......+..+.| ..|...++.+.
T Consensus 89 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~ 161 (230)
T d1wr8a_ 89 --WNEIRKRFPNARTSYTMPDRRAGLVIMRETINVE-----TVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKAS 161 (230)
T ss_dssp --HHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHH-----HHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHH
T ss_pred --HHHHHHhcccccceeecccceeeEEEecccccHH-----HHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccc
Confidence 111111111110000 001111111111111111 11222222111 011112233444 45888888876
Q ss_pred cc---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 848 KG---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 848 ~~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
+. ..+.|+++|||.||++|++.||+||+|+++... ++..||+++...+
T Consensus 162 ~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~-~k~~A~~v~~~~~ 212 (230)
T d1wr8a_ 162 EFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKI-LKENADYVTKKEY 212 (230)
T ss_dssp HHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHTTCSEECSSCH
T ss_pred cccccchhheeeeecCccHHHHHHHCCeEEEECCCCHH-HHHhCCEEECCCC
Confidence 54 346799999999999999999999999655433 8999999987644
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=2.6e-10 Score=122.14 Aligned_cols=191 Identities=14% Similarity=0.132 Sum_probs=106.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+.+.++|++|+++||+++++|||+...+..+.+++++..+.. +++..++..+....... ......+..+....
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~--~~i~~nGa~i~~~~~~~--~i~~~~~~~~~~~~ 96 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGD--YCITYNGALVQKAADGS--TVAQTALSYDDYRF 96 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTC--EEEEGGGTEEEETTTCC--EEEECCBCHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCc--EEEEcCceeEeccCCCe--EEEeecccHHHHHH
Confidence 477889999999999999999999999999999999999876543 34444444332211100 00000001111111
Q ss_pred HHHHHHhhhhcc--------------------------------------cccCCCeEEEEEcCccchhhcChhHHHHHH
Q 001335 779 LNKCIDEAQQYI--------------------------------------HSISGEKLALIIDGKCLMYALDPSLRVILL 820 (1097)
Q Consensus 779 ~~~~~~~~~~~~--------------------------------------~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~ 820 (1097)
+.....+..... .........+.++...........+++.+.
T Consensus 97 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 176 (271)
T d1rkqa_ 97 LEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVK 176 (271)
T ss_dssp HHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHH
T ss_pred HHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhh
Confidence 111111110000 000011112222222211111111112222
Q ss_pred hhh-ccCCceEEEEeCcc--cHHHHHHHHHcc---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 821 NLS-LNCSSVVCCRVSPL--QKAQVTSLVKKG---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 821 ~l~-~~~~~vi~~r~sP~--qK~~iv~~lk~~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
... ......-+...+|. .|+..++.+.+. ....++++|||.||++||+.|+.||+|+++.. .++..||++...
T Consensus 177 ~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~-~lk~~a~~i~~~ 255 (271)
T d1rkqa_ 177 EKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIP-SVKEVANFVTKS 255 (271)
T ss_dssp HHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCC
T ss_pred cceEEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCH-HHHHhCCEEcCC
Confidence 111 10111123556676 499999988764 23569999999999999999999999965543 389999998864
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.94 E-value=6.2e-09 Score=120.18 Aligned_cols=174 Identities=15% Similarity=0.064 Sum_probs=126.8
Q ss_pred hhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchh
Q 001335 905 HGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQL 984 (1097)
Q Consensus 905 ~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~l 984 (1097)
.||..|.|+.|.+.|.+..|+..++..++..++. ..+++++.|++|.|++++.+|+++++.. ++++.+|++|+
T Consensus 227 ~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~---~p~pl~~~qILwinli~d~lpaiaL~~e---p~d~~iM~~~P- 299 (472)
T d1wpga4 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG---LPEALIPVQLLWVNLVTDGLPATALGFN---PPDLDIMDRPP- 299 (472)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCSCCHHHHHHHHHTTTHHHHHHHTTC---CCCSGGGGSCC-
T ss_pred HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcC---CCccccHHHHHHHHHHhHHHHHHHHhcC---CCchhhhcCCC-
Confidence 4999999999999999999999999998888765 4557899999999999999999999863 34444555555
Q ss_pred hhhcccccccCHHHHHHHHHHHHHHHHHHHHhhh-hcCCCcc---------------CC-----C---CccchhhHHHHH
Q 001335 985 YQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSSATGQ---------------NS-----S---GKIFGIWDVSTM 1040 (1097)
Q Consensus 985 y~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~-~~~~~~~---------------~~-----~---g~~~~~~~~~~~ 1040 (1097)
+++++.+++.+.+..+...|++.+++.+.+.+ .+..... .. + ..........|+
T Consensus 300 --r~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~ 377 (472)
T d1wpga4 300 --RSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTM 377 (472)
T ss_dssp --CCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHH
T ss_pred --CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHH
Confidence 57888999999999999999988877765554 2211100 00 0 011223456788
Q ss_pred HHHHHHHHHHHHHHHhc-ccc-----hHHHHHHHHHHHHHHHHHHHHHhccCC
Q 001335 1041 AFTCVVVTVNLRLLMMC-NTI-----TRFHYITVGGSILAWFLFVFLYTGIMT 1087 (1097)
Q Consensus 1041 ~~~~~v~~~~~~~~~~~-~~~-----~~~~~~~~~~si~~~~~~~~~~~~~~~ 1087 (1097)
+|+++++.+.++..... ++. .++.+.++++++++.+++++++.++|+
T Consensus 378 ~F~~lv~~q~~~~~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~ 430 (472)
T d1wpga4 378 ALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDP 430 (472)
T ss_dssp HHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhH
Confidence 99988887666644322 122 145777888888888888888888875
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.93 E-value=2.7e-10 Score=123.01 Aligned_cols=64 Identities=25% Similarity=0.256 Sum_probs=52.3
Q ss_pred EEEEeCcc--cHHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 830 VCCRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 830 i~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
.+.+++|. .|+..++.+.+..| +.|+++|||.||++||+.|+.||+|.++.. +++..||++...
T Consensus 203 ~~ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~-~~k~~A~~v~~~ 271 (285)
T d1nrwa_ 203 HNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARE-DIKSIADAVTLT 271 (285)
T ss_dssp TEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCH-HHHHHCSEECCC
T ss_pred cEEEEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCH-HHHHhCCEEcCC
Confidence 34567777 59999998876533 569999999999999999999999965543 389999999875
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.91 E-value=6.4e-10 Score=115.60 Aligned_cols=180 Identities=13% Similarity=0.115 Sum_probs=99.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHH
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVK 776 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1097)
+.++.+++.+++++|++.|++++++|||+...+..++...|+... ++..++........... +....+..
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~-----~i~~~G~~~~~~~~~~~-----~~~~~~~~ 87 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGP-----VFGENGGIMFDNDGSIK-----KFFSNEGT 87 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSC-----EEEGGGTEEECTTSCEE-----ESSCSHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCce-----EEeecceEEEeCCccEE-----EecChHHH
Confidence 455778999999999999999999999999999999998887431 22233222111100000 00000111
Q ss_pred HHHHHHHHhhhhc----ccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCce-----EEEEeCcc--cHHHHHHH
Q 001335 777 RELNKCIDEAQQY----IHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSV-----VCCRVSPL--QKAQVTSL 845 (1097)
Q Consensus 777 ~~~~~~~~~~~~~----~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~v-----i~~r~sP~--qK~~iv~~ 845 (1097)
.+........... .............+... .+............ .++...|. .|+..++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~ 158 (225)
T d1l6ra_ 88 NKFLEEMSKRTSMRSILTNRWREASTGFDIDPED---------VDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNK 158 (225)
T ss_dssp HHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGG---------HHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHH
T ss_pred HHHHHHHHHhcCcceeecccceeeeeccccCHHH---------HHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHH
Confidence 1111111110000 00011111222222111 11111111111111 23445554 59988887
Q ss_pred HHcc---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 846 VKKG---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 846 lk~~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
+.+. ....|+++|||.||++|++.||+||+|+++... +++.||++.....
T Consensus 159 l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~-~k~~ad~v~~~~~ 211 (225)
T d1l6ra_ 159 LKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDN-IKAVSDFVSDYSY 211 (225)
T ss_dssp HHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHH-HHHHCSEECSCCT
T ss_pred HhhhhccchhheeeecCCcchHHHHHHCCeEEEECCCcHH-HHHhCCEEECCCC
Confidence 7653 235699999999999999999999999655443 8999999876544
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.90 E-value=1.3e-09 Score=112.40 Aligned_cols=131 Identities=20% Similarity=0.289 Sum_probs=92.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
+++|++.++|+.|+++|++++++||.....+.++++.+|+-..+ .+. + .
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~a-n-~--------------------------- 130 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFA-N-R--------------------------- 130 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEE-E-C---------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eee-e-e---------------------------
Confidence 47899999999999999999999999999999999999985321 110 0 0
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc-cCceEEEe
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG-ARKITLSI 857 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~-~~~~vlai 857 (1097)
+....+|....... .-....+..|..+++.+++. .-+.++++
T Consensus 131 -------------------~~~~~~G~~~g~~~------------------~~p~~~~~~K~~~v~~~~~~~~~~~~~~v 173 (217)
T d1nnla_ 131 -------------------LKFYFNGEYAGFDE------------------TQPTAESGGKGKVIKLLKEKFHFKKIIMI 173 (217)
T ss_dssp -------------------EEECTTSCEEEECT------------------TSGGGSTTHHHHHHHHHHHHHCCSCEEEE
T ss_pred -------------------eeeeehhcccccee------------------eeeeeccchHHHHHHHHHhccCccccEEE
Confidence 00000111000000 00002356699999998763 23568999
Q ss_pred cCCCCChhhhhhcCeeEEecCc-cchhhhhhcceeccchHh
Q 001335 858 GDGANDVSMIQAAHIGVGISGQ-EGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 858 GDG~ND~~ml~~AdvGIam~g~-e~~~a~~~AD~vi~~~~~ 897 (1097)
|||.||++|++.||++||+.++ ...+.++.||+++.+|.-
T Consensus 174 GDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~e 214 (217)
T d1nnla_ 174 GDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVE 214 (217)
T ss_dssp ESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGG
T ss_pred EeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHH
Confidence 9999999999999999999654 334467789999988764
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.89 E-value=1.9e-10 Score=123.12 Aligned_cols=65 Identities=18% Similarity=0.175 Sum_probs=52.7
Q ss_pred EEEeCccc--HHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 831 CCRVSPLQ--KAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 831 ~~r~sP~q--K~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
+.+++|.. |+..++.+.+.. ...|+++|||.||++||+.|+.||+|+++.. ++|..||+++...+
T Consensus 181 ~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~-~lk~~A~~v~~~~~ 250 (269)
T d1rlma_ 181 FIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAE-NIKQIARYATDDNN 250 (269)
T ss_dssp EEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred eEEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCH-HHHHhCCEEcCCCC
Confidence 45777765 999999887653 3569999999999999999999999965543 38999999987633
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.87 E-value=1.3e-09 Score=116.06 Aligned_cols=65 Identities=28% Similarity=0.391 Sum_probs=51.5
Q ss_pred EEEeCcc--cHHHHHHHHHcc---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 831 CCRVSPL--QKAQVTSLVKKG---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 831 ~~r~sP~--qK~~iv~~lk~~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
+..+.|. .|+..++.+.+. ....++++|||.||++||+.|+.||+|.++... ++..||++.....
T Consensus 177 ~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~-lk~~A~~vt~~~~ 246 (260)
T d2rbka1 177 FADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKED-VKAAADYVTAPID 246 (260)
T ss_dssp CCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHSSEECCCGG
T ss_pred EEEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHH-HHHhCCEEeCCCC
Confidence 3556666 499999888764 346799999999999999999999999655433 8999999876543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.79 E-value=1.2e-09 Score=116.82 Aligned_cols=66 Identities=18% Similarity=0.267 Sum_probs=52.6
Q ss_pred EEEEeCcc--cHHHHHHHHHcc---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 830 VCCRVSPL--QKAQVTSLVKKG---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 830 i~~r~sP~--qK~~iv~~lk~~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
.+..++|. .|+..++.+.+. ....|++||||.||++||+.||+||+|+++... ++..||+++...+
T Consensus 180 ~~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~-~k~~A~~i~~~~~ 250 (267)
T d1nf2a_ 180 TYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEK-VKEASDIVTLTNN 250 (267)
T ss_dssp TEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHH-HHHHCSEECCCTT
T ss_pred ceeeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHH-HHHhCCEEcCCCC
Confidence 34567776 499999888764 235699999999999999999999999655433 8999999987544
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.76 E-value=1.3e-08 Score=100.29 Aligned_cols=113 Identities=21% Similarity=0.224 Sum_probs=83.7
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHh
Q 001335 706 ACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDE 785 (1097)
Q Consensus 706 e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1097)
.+|+.|++.|+.+.++||+....+...+.++++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 47999999999999999999999999999988732
Q ss_pred hhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEEEecCCCC
Q 001335 786 AQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITLSIGDGAN 862 (1097)
Q Consensus 786 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~N 862 (1097)
++ .....|...++.+.+. ....|+++||+.|
T Consensus 74 --------------------------------------------~~--~~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~n 107 (177)
T d1k1ea_ 74 --------------------------------------------FF--LGKLEKETACFDLMKQAGVTAEQTAYIGDDSV 107 (177)
T ss_dssp --------------------------------------------EE--ESCSCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred --------------------------------------------cc--cccccHHHHHHHHHHHhcCCcceeEEecCCcc
Confidence 11 1123344444443332 3467999999999
Q ss_pred ChhhhhhcCeeEEecCccchhhhhhcceeccc------hHhHHHH-HHhhhhhhH
Q 001335 863 DVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ------FRFLTDL-LLVHGRWSY 910 (1097)
Q Consensus 863 D~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~------~~~l~~l-ll~~Gr~~~ 910 (1097)
|++||+.|++|+++.++... ++..|||++.. .+-+..+ |-..|+|.+
T Consensus 108 Dl~~l~~~g~siap~nA~~~-vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~~~ 161 (177)
T d1k1ea_ 108 DLPAFAACGTSFAVADAPIY-VKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 161 (177)
T ss_dssp GHHHHHHSSEEEECTTSCHH-HHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHhhCCeEEEcCCccHH-HHHhCCEEeCCCCCCchHHHHHHHHHHHCCChHH
Confidence 99999999999999766544 89999999875 2333333 445677655
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.72 E-value=1.6e-08 Score=104.65 Aligned_cols=53 Identities=9% Similarity=0.083 Sum_probs=43.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAI 755 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~ 755 (1097)
.+.+.+.++|++|+++|++++++|||....+..+.+++++-.. ..+..++..+
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~~----~~i~~nGa~i 73 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGL----PLIAENGAVI 73 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTS----CEEEGGGTEE
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCCc----eEEccCCeEE
Confidence 4778999999999999999999999999999999999987421 2455555443
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.69 E-value=3.5e-09 Score=113.66 Aligned_cols=62 Identities=18% Similarity=0.268 Sum_probs=48.9
Q ss_pred EEeCccc--HHHHHHHHHcc---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 832 CRVSPLQ--KAQVTSLVKKG---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 832 ~r~sP~q--K~~iv~~lk~~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
....|.. |...++.+.+. ....|+++|||.||++||+.||+||+|+++.. .++..||+++..
T Consensus 199 ~~i~~~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~-~~k~~a~~v~~~ 265 (283)
T d2b30a1 199 AEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLPV 265 (283)
T ss_dssp EEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECSS
T ss_pred EeecCCcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCH-HHHHhCCEEECC
Confidence 4455544 88888877654 33579999999999999999999999965543 389999999864
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.66 E-value=1.7e-08 Score=105.51 Aligned_cols=43 Identities=12% Similarity=0.034 Sum_probs=39.0
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.+...+.++++|++|+++|++++++|||+...+..+.+++++-
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 4555678999999999999999999999999999999999874
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.53 E-value=5e-08 Score=102.18 Aligned_cols=180 Identities=15% Similarity=0.142 Sum_probs=95.3
Q ss_pred HHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHH----HHHHHHH
Q 001335 705 PACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMRE----EVKRELN 780 (1097)
Q Consensus 705 ~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 780 (1097)
.+.+.++++.|+++.++|||....+..+.++.++..++ ..+..++..+...+... ....+.+.+ .....+.
T Consensus 24 ~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~---~~i~~~G~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 98 (244)
T d1s2oa1 24 LQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPD---YWLTAVGSEIYHPEGLD--QHWADYLSEHWQRDILQAIA 98 (244)
T ss_dssp HHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCS---EEEETTTTEEEETTEEC--HHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCc---eEEeccceEEEEccCcc--hHHHHHHHHHHhHHHHHHHH
Confidence 34566678889999999999999999999999986543 45666666554332211 111121111 1111111
Q ss_pred HHHHhhhhcc-cccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCC----ceEEEEeCcc--cHHHHHHHHHcccC--
Q 001335 781 KCIDEAQQYI-HSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCS----SVVCCRVSPL--QKAQVTSLVKKGAR-- 851 (1097)
Q Consensus 781 ~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~----~vi~~r~sP~--qK~~iv~~lk~~~~-- 851 (1097)
+......... .............-...... .+.+...+........ .--+..+.|. .|+..++.+.+..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~ 177 (244)
T d1s2oa1 99 DGFEALKPQSPLEQNPWKISYHLDPQACPTV-IDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAME 177 (244)
T ss_dssp HTCTTEEECCGGGCBTTBEEEEECTTSCTHH-HHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCC
T ss_pred hhcccccccChhhhcceEEEEeccccccHHH-HHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCC
Confidence 1111100000 00011111111111110000 0112222221111110 0012344444 49999998877533
Q ss_pred -ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhccee
Q 001335 852 -KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFA 891 (1097)
Q Consensus 852 -~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~v 891 (1097)
..|+++|||.||++||+.||.||+|.++... ++..||.+
T Consensus 178 ~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~-lk~~a~~~ 217 (244)
T d1s2oa1 178 PSQTLVCGDSGNDIGLFETSARGVIVRNAQPE-LLHWYDQW 217 (244)
T ss_dssp GGGEEEEECSGGGHHHHTSSSEEEECTTCCHH-HHHHHHHH
T ss_pred hhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHH-HHHHhhcc
Confidence 5699999999999999999999999665543 77777743
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.52 E-value=2.4e-07 Score=93.60 Aligned_cols=129 Identities=18% Similarity=0.136 Sum_probs=85.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
+..++....++.+ +.+.+..++|+.-...........++..............
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------- 121 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc--------------------------
Confidence 4566777777665 5789999999999999998888888754321111111000
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
.........+.-+...++.++- ..+.|+|||
T Consensus 122 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~i-~~~eviaiG 152 (206)
T d1rkua_ 122 ------------------------------------------------RVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAG 152 (206)
T ss_dssp ------------------------------------------------CEEEEECCSSSHHHHHHHHHHH-TTCEEEEEE
T ss_pred ------------------------------------------------ccccccccchhhHHHHHHHhcc-cccceEEec
Confidence 0012222333445556666665 678899999
Q ss_pred CCCCChhhhhhcCeeEEecCccchhhhhhcceecc-chHhHHHHHHh
Q 001335 859 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIA-QFRFLTDLLLV 904 (1097)
Q Consensus 859 DG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~-~~~~l~~lll~ 904 (1097)
||.||++||+.||+|||| ++.....++++||+.. ++.-+...++.
T Consensus 153 Dg~NDi~Ml~~Ag~gIAm-na~~~v~~~~~~~~~~~~~~d~~~~~~~ 198 (206)
T d1rkua_ 153 DSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLK 198 (206)
T ss_dssp CSSTTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHHH
T ss_pred CCccCHHHHHhCCccEEE-CCCHHHHHhCCCceeecCHHHHHHHHHH
Confidence 999999999999999999 4443335678899754 45556665443
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.39 E-value=2.9e-07 Score=94.81 Aligned_cols=136 Identities=12% Similarity=0.133 Sum_probs=90.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
+++|++.+.++.|++.|+++.++||-....+..+.+.+|+...- +...
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~---~an~----------------------------- 122 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRI---YCNH----------------------------- 122 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGE---EEEE-----------------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccce---eeee-----------------------------
Confidence 47899999999999999999999999999999999998875321 0000
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
+.+++........ ......++...|+.|..+++.++. ....|++||
T Consensus 123 ---------------------~~~~~~~~~~~~~------------~~~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iG 168 (226)
T d2feaa1 123 ---------------------ASFDNDYIHIDWP------------HSCKGTCSNQCGCCKPSVIHELSE-PNQYIIMIG 168 (226)
T ss_dssp ---------------------EECSSSBCEEECT------------TCCCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEE
T ss_pred ---------------------EEEeCCcceeccc------------cccccccccCCHHHHHHHHHHhcC-CCceEEEEe
Confidence 0011110000000 000013345678889999999887 678899999
Q ss_pred CCCCChhhhhhcCeeEEecC-ccchhhhhhcc-eeccchHhHHHH
Q 001335 859 DGANDVSMIQAAHIGVGISG-QEGMQAVMASD-FAIAQFRFLTDL 901 (1097)
Q Consensus 859 DG~ND~~ml~~AdvGIam~g-~e~~~a~~~AD-~vi~~~~~l~~l 901 (1097)
|+.||++|+++||+++++.+ .+.. .....+ ..+.+|+-+...
T Consensus 169 Ds~~Dl~~a~~A~~~~a~~~~~~~~-~~~~~~~~~~~d~~~i~~~ 212 (226)
T d2feaa1 169 DSVTDVEAAKLSDLCFARDYLLNEC-REQNLNHLPYQDFYEIRKE 212 (226)
T ss_dssp CCGGGHHHHHTCSEEEECHHHHHHH-HHTTCCEECCSSHHHHHHH
T ss_pred CchhhHHHHHHCCEEEEecchHHHH-HHcCCCeeecCCHHHHHHH
Confidence 99999999999999999843 2221 122233 345566655444
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.38 E-value=1.2e-07 Score=98.53 Aligned_cols=62 Identities=13% Similarity=0.226 Sum_probs=50.6
Q ss_pred EEEEeCccc--HHHHHHHHHcccCceEEEecC----CCCChhhhhhcC-eeEEecCccchhhhhhcceec
Q 001335 830 VCCRVSPLQ--KAQVTSLVKKGARKITLSIGD----GANDVSMIQAAH-IGVGISGQEGMQAVMASDFAI 892 (1097)
Q Consensus 830 i~~r~sP~q--K~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~Ad-vGIam~g~e~~~a~~~AD~vi 892 (1097)
.+.+++|.. |+..++.|.+.....|+++|| |.||++||++|+ .|++|++++.. ++..+|+++
T Consensus 175 ~~lei~~~~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~-~k~~~~~~~ 243 (244)
T d2fuea1 175 ISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT-VQRCREIFF 243 (244)
T ss_dssp SCEEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH-HHHHHHHHC
T ss_pred ccceecchhccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHH-HHHHHHhcC
Confidence 344667765 999999998766678999999 569999999997 69999777664 788888875
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.31 E-value=3.9e-07 Score=92.20 Aligned_cols=123 Identities=22% Similarity=0.214 Sum_probs=81.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
.++.+++.+.++.++..|..+.++||.....+.......+....-.......
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------- 125 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVK---------------------------- 125 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEE----------------------------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccc----------------------------
Confidence 4788999999999999999999999999999988888877643211100000
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEe--CcccHHHHHHHHHcc---cCc
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRV--SPLQKAQVTSLVKKG---ARK 852 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~--sP~qK~~iv~~lk~~---~~~ 852 (1097)
++... ...... .+..|...++.+... ...
T Consensus 126 -------------------------~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (210)
T d1j97a_ 126 -------------------------DGKLT---------------------GDVEGEVLKENAKGEILEKIAKIEGINLE 159 (210)
T ss_dssp -------------------------TTEEE---------------------EEEECSSCSTTHHHHHHHHHHHHHTCCGG
T ss_pred -------------------------ccccc---------------------ccccccccccccccchhhhHHHHhccccc
Confidence 00000 000000 112233333333221 345
Q ss_pred eEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 853 ITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 853 ~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
.++|+|||.||++|++.||+||||.+.+. .+..||+++...+
T Consensus 160 ~~i~iGDs~nDi~m~~~ag~~va~na~~~--lk~~Ad~vi~~~d 201 (210)
T d1j97a_ 160 DTVAVGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEKRD 201 (210)
T ss_dssp GEEEEESSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSSC
T ss_pred ceEEecCCcChHHHHHHCCCCEEECCCHH--HHHhCCEEEcCCC
Confidence 69999999999999999999999955444 7889999997644
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.21 E-value=1.7e-06 Score=88.65 Aligned_cols=64 Identities=17% Similarity=0.211 Sum_probs=48.6
Q ss_pred EEEEeCccc--HHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhH
Q 001335 830 VCCRVSPLQ--KAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFL 898 (1097)
Q Consensus 830 i~~r~sP~q--K~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l 898 (1097)
.+.++.|.. |+..++.+.+ ...++++||+.||++||+.|+.|++|...+ ++..|+|.+.+-.-.
T Consensus 149 ~~idi~p~g~~Kg~al~~l~~--~~~~i~~GDs~ND~~Mf~~~~~~~av~~g~---~~~~A~~~~~~~~ev 214 (229)
T d1u02a_ 149 MIIELRVPGVNKGSAIRSVRG--ERPAIIAGDDATDEAAFEANDDALTIKVGE---GETHAKFHVADYIEM 214 (229)
T ss_dssp SEEEEECTTCCHHHHHHHHHT--TSCEEEEESSHHHHHHHHTTTTSEEEEESS---SCCCCSEEESSHHHH
T ss_pred eEEEEecCCCCHHHHHHHHhc--cccceeecCCCChHHHHhccCCeEEEEeCC---CCccCeEEcCCHHHH
Confidence 356777775 9999999986 356889999999999999998777773222 245789998765543
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.94 E-value=1.8e-06 Score=89.22 Aligned_cols=57 Identities=21% Similarity=0.300 Sum_probs=42.3
Q ss_pred EEeCccc--HHHHHHHHHcccCceEEEecC----CCCChhhhhhcC-eeEEecCccchhhhhhcce
Q 001335 832 CRVSPLQ--KAQVTSLVKKGARKITLSIGD----GANDVSMIQAAH-IGVGISGQEGMQAVMASDF 890 (1097)
Q Consensus 832 ~r~sP~q--K~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~Ad-vGIam~g~e~~~a~~~AD~ 890 (1097)
.++.|.+ |+..++.+.+...+.|+++|| |.||++||+.|+ .|+++++.+. .+..++.
T Consensus 177 lei~~~~vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~--~~~~~~~ 240 (243)
T d2amya1 177 FDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED--TRRICEL 240 (243)
T ss_dssp EEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH--HHHHHHH
T ss_pred ceeeccccCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH--HHHHHHH
Confidence 3456665 998888887655678999999 889999999998 6888877665 5555554
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.14 E-value=0.00037 Score=70.27 Aligned_cols=125 Identities=18% Similarity=0.160 Sum_probs=83.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
.++.++++++++.|++.|+++.++||.....+..+.+.+||...-... +.....
T Consensus 94 ~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~--~~~~~~------------------------ 147 (224)
T d2hsza1 94 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEM--LGGQSL------------------------ 147 (224)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEE--ECTTTS------------------------
T ss_pred cchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccc--cccccc------------------------
Confidence 357899999999999999999999999999999999999985422111 110000
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEe
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 857 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlai 857 (1097)
. ...-.|+--..+.+.++- ....+++|
T Consensus 148 ------------------------------~----------------------~~kp~p~~~~~~~~~~~~-~~~~~~~i 174 (224)
T d2hsza1 148 ------------------------------P----------------------EIKPHPAPFYYLCGKFGL-YPKQILFV 174 (224)
T ss_dssp ------------------------------S----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEE
T ss_pred ------------------------------c----------------------cccccchhhHHHHHHhhh-hhhccchh
Confidence 0 000012222233333433 45779999
Q ss_pred cCCCCChhhhhhcCe-eEEec-Cc--cchhhhhhcceeccchHhHHHH
Q 001335 858 GDGANDVSMIQAAHI-GVGIS-GQ--EGMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 858 GDG~ND~~ml~~Adv-GIam~-g~--e~~~a~~~AD~vi~~~~~l~~l 901 (1097)
||+.+|+.+-+.||+ .|++. |. ........+|+++.++.-|.++
T Consensus 175 gD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 175 GDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred cCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHh
Confidence 999999999999998 56663 21 1111344689999887766544
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.07 E-value=0.00068 Score=71.01 Aligned_cols=44 Identities=14% Similarity=0.302 Sum_probs=40.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNE 742 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~ 742 (1097)
+||+|+++.++.|++.|+++.++||--..-+..+++++|+..++
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~n 178 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSN 178 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTT
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccC
Confidence 48999999999999999999999999999999999999986544
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=96.97 E-value=0.00074 Score=67.76 Aligned_cols=42 Identities=12% Similarity=0.192 Sum_probs=38.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.|++.++++.|+++|+++.++||.....+..+.+..|+..
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~ 129 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD 129 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 456999999999999999999999999999999999999953
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.68 E-value=0.00044 Score=64.08 Aligned_cols=107 Identities=16% Similarity=0.229 Sum_probs=72.5
Q ss_pred cCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEEEecch
Q 001335 532 AASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGAD 611 (1097)
Q Consensus 532 ~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 611 (1097)
++||..+|++++|++.+....... .+.-....+|+...+...+.+ +|+ .+..|++
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~g~~~---~g~--~v~~G~~ 83 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERDV--------------------QSLHATFVPFTAQSRMSGINI---DNR--MIRKGSV 83 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCCT--------------------TTTTCEEEEEETTTTEEEEEE---TTE--EEEEECH
T ss_pred CCchHHHHHHHHHHHhcCCCcccc--------------------ccccccccccccccceEEEEE---CCE--EEEecHH
Confidence 589999999999998653321100 001111245555554433332 343 4455999
Q ss_pred hHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEE
Q 001335 612 SVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLI 691 (1097)
Q Consensus 612 ~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~ll 691 (1097)
..|...+...+......+.+.++.++.+|..++.+|. |-+++
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~--------------------------------------d~~~~ 125 (136)
T d2a29a1 84 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVE--------------------------------------GSRVL 125 (136)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEE--------------------------------------TTEEE
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEE--------------------------------------CCEEE
Confidence 8887766554444566788889999999999999994 67999
Q ss_pred EEeeeccccC
Q 001335 692 GCTAIEDKLQ 701 (1097)
Q Consensus 692 G~~~ieD~lr 701 (1097)
|++++.|++|
T Consensus 126 G~i~l~D~iK 135 (136)
T d2a29a1 126 GVIALKDIVK 135 (136)
T ss_dssp EEEEEEESSC
T ss_pred EEEEEEeecC
Confidence 9999999986
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.65 E-value=0.0018 Score=64.29 Aligned_cols=118 Identities=16% Similarity=0.104 Sum_probs=80.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.+.++.++..+ ++.++|+.....+..+....|+...-..
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~--------------------------------- 128 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDG--------------------------------- 128 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccccc---------------------------------
Confidence 467899999999999775 8999999999999999999998532111
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceE
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKIT 854 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~v 854 (1097)
++.+...+..|....+.+.+. ....+
T Consensus 129 ---------------------------------------------------v~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 157 (210)
T d2ah5a1 129 ---------------------------------------------------IYGSSPEAPHKADVIHQALQTHQLAPEQA 157 (210)
T ss_dssp ---------------------------------------------------EEEECSSCCSHHHHHHHHHHHTTCCGGGE
T ss_pred ---------------------------------------------------cccccccccccccccchhhhhhhcccccc
Confidence 122222333344443333322 34679
Q ss_pred EEecCCCCChhhhhhcCe-eEEe-cCccchh--hhhhcceeccchHhHHH
Q 001335 855 LSIGDGANDVSMIQAAHI-GVGI-SGQEGMQ--AVMASDFAIAQFRFLTD 900 (1097)
Q Consensus 855 laiGDG~ND~~ml~~Adv-GIam-~g~e~~~--a~~~AD~vi~~~~~l~~ 900 (1097)
++|||+.+|+.|-+.||+ .|++ .|....+ ....+|+++.+..-+..
T Consensus 158 v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~ 207 (210)
T d2ah5a1 158 IIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred eeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 999999999999999998 6777 3332211 22348999888665443
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.62 E-value=0.00076 Score=69.70 Aligned_cols=42 Identities=31% Similarity=0.263 Sum_probs=38.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.+|+.++++.|++.|+++.++||.....+..+.+..|+..
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~ 140 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG 140 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcc
Confidence 688999999999999999999999999999999988888753
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.59 E-value=0.0012 Score=66.70 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=38.0
Q ss_pred ccCCChHHHHHHHHHcC-CeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAG-IKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aG-Ikv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++-||+.++++.|++.| +++.++||.....+..+.+..|+..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~ 133 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 133 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc
Confidence 55789999999999987 8999999999999999999999854
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.37 E-value=0.0049 Score=62.11 Aligned_cols=41 Identities=15% Similarity=0.160 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.||+.++++.|+ +|++++++|+-.......+.+.+|+..
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~ 140 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKD 140 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGG
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccc
Confidence 46799999999996 589999999998888889999998843
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.11 E-value=0.0039 Score=61.50 Aligned_cols=41 Identities=17% Similarity=0.204 Sum_probs=34.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.||++++++.|++.|+++.++|+... .+..+.+..|+..
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~ 122 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVES 122 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGG
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccc
Confidence 5679999999999999999999998654 5667778888743
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.75 E-value=0.005 Score=59.93 Aligned_cols=40 Identities=18% Similarity=0.309 Sum_probs=33.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+|+++.++.|++.|+++.++|+.+.. +..+.+.+++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~-~~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQ-VLEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccc-hhhhhhhhccc
Confidence 56799999999999999999999997654 45567777764
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.73 E-value=0.0025 Score=63.18 Aligned_cols=41 Identities=12% Similarity=0.233 Sum_probs=36.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.||+.++++.|+ +++++.++|+.....+..+.+..|+..
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~ 122 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMM 122 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGG
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccc
Confidence 46799999999997 579999999999999999999988753
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=95.67 E-value=0.017 Score=55.73 Aligned_cols=52 Identities=23% Similarity=0.314 Sum_probs=37.8
Q ss_pred cCceEEEecCCCCChhhhhhcCee--EEe-cCccc-hhhhhhcceeccchHhHHHH
Q 001335 850 ARKITLSIGDGANDVSMIQAAHIG--VGI-SGQEG-MQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 850 ~~~~vlaiGDG~ND~~ml~~AdvG--Iam-~g~e~-~~a~~~AD~vi~~~~~l~~l 901 (1097)
..+.++||||..+|+.|=+.|+++ +.+ .|... ......||+++.+..-+..+
T Consensus 124 ~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 124 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred ccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 345689999999999999999985 344 34322 22446699999998776665
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.37 E-value=0.0021 Score=60.10 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=27.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCCh
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKM 726 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~ 726 (1097)
+|++.+++.+.++.|+++|+++.++||++.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRES 63 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcH
Confidence 578999999999999999999999999974
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.34 E-value=0.019 Score=58.08 Aligned_cols=40 Identities=23% Similarity=0.354 Sum_probs=35.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
+.|++.++++.|++ |++++++|+..........+.+|+..
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~ 149 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS 149 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccc
Confidence 67899999999984 89999999999999899999999854
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.97 E-value=0.021 Score=54.07 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=30.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCCh-hhHHHHHHHcCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKM-ETAINIAYACNL 738 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~-~ta~~ia~~~gi 738 (1097)
++.|++.++++.|+++|+++.++|+-+. ..+....+..++
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~ 86 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDL 86 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccc
Confidence 5789999999999999999999997554 334444444444
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=94.74 E-value=0.016 Score=58.44 Aligned_cols=43 Identities=12% Similarity=0.190 Sum_probs=38.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
-.+.|++.+++++|++.|+++.++|+............+|+..
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~ 168 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGD 168 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBC
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcch
Confidence 4568999999999999999999999999998888888888743
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=94.08 E-value=0.19 Score=50.59 Aligned_cols=43 Identities=12% Similarity=0.165 Sum_probs=32.7
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTG---DKMETAINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gi~ 739 (1097)
.+++=+++.++|+.|+++|++++++|+ +........-+++|+-
T Consensus 17 ~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 17 DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 445557899999999999999999985 4455555555667774
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=93.72 E-value=0.098 Score=52.94 Aligned_cols=38 Identities=11% Similarity=0.121 Sum_probs=31.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 736 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 736 (1097)
+.=+++.++|+.|+++|++++++|+....+...++..+
T Consensus 18 ~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 18 EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 33378899999999999999999998878777776654
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=92.96 E-value=0.1 Score=51.29 Aligned_cols=26 Identities=35% Similarity=0.437 Sum_probs=23.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGD 724 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD 724 (1097)
++-|++.++|++|+++|+++.++|..
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred EecccHHHHHHHHHhhCCeEEEeccc
Confidence 46799999999999999999999964
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=92.74 E-value=0.46 Score=47.86 Aligned_cols=60 Identities=18% Similarity=0.259 Sum_probs=39.8
Q ss_pred HHHHHHHcccCceEEEecCCC-CChhhhhhcCe-eEEe-cCccch----hhhhhcceeccchHhHHHH
Q 001335 841 QVTSLVKKGARKITLSIGDGA-NDVSMIQAAHI-GVGI-SGQEGM----QAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 841 ~iv~~lk~~~~~~vlaiGDG~-ND~~ml~~Adv-GIam-~g~e~~----~a~~~AD~vi~~~~~l~~l 901 (1097)
.+.+.+.- ....++||||.. +|+.+-+.|++ +|.+ +|.... .+...+||++.+..-|.++
T Consensus 193 ~a~~~l~~-~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 193 VISEKFGV-PKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp HHHHHHTC-CGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred HHHhhhcc-CchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 33344432 456799999995 69999999998 7776 442211 1122359999987776665
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=92.50 E-value=0.03 Score=54.48 Aligned_cols=41 Identities=20% Similarity=0.210 Sum_probs=33.7
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCCh----hhHHHHHHHcCCcc
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKM----ETAINIAYACNLIN 740 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~----~ta~~ia~~~gi~~ 740 (1097)
+.+++.+.++.+++.|++|+.+|||.. .|+.++.+.+|+-.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~ 131 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA 131 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCc
Confidence 457999999999999999999999963 46667777778743
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=91.94 E-value=0.087 Score=51.73 Aligned_cols=43 Identities=19% Similarity=0.264 Sum_probs=37.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
..+.+++.++++.+++.|+++.++|+-....+.......++..
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~ 134 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD 134 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccc
Confidence 3567899999999999999999999999988888888877754
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=91.52 E-value=0.062 Score=53.02 Aligned_cols=42 Identities=19% Similarity=0.179 Sum_probs=35.1
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
..++-+|+.+.++.|++.|+++.++|+... +....+..|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 456889999999999999999999999754 566777777754
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=91.28 E-value=1.1 Score=44.82 Aligned_cols=39 Identities=8% Similarity=0.027 Sum_probs=29.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 736 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 736 (1097)
+.+=+++.++|+.|+++|++++++|+....+...+++.+
T Consensus 17 ~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l 55 (253)
T d1wvia_ 17 KDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEML 55 (253)
T ss_dssp TEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 344488999999999999999999986655555555443
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=86.59 E-value=0.22 Score=48.82 Aligned_cols=53 Identities=13% Similarity=0.249 Sum_probs=38.3
Q ss_pred cCceEEEecCCCCChhhhhhcCe-eEEecCccc------hh-hhhhcceeccchHhHHHHH
Q 001335 850 ARKITLSIGDGANDVSMIQAAHI-GVGISGQEG------MQ-AVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 850 ~~~~vlaiGDG~ND~~ml~~Adv-GIam~g~e~------~~-a~~~AD~vi~~~~~l~~ll 902 (1097)
..+.+++|||+.+|+.+=+.|++ .|++.+... .. ....||+++.++.-|..+|
T Consensus 157 ~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 157 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred CCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 44679999999999999999998 467743221 11 1124999999988876663
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=82.79 E-value=0.36 Score=44.91 Aligned_cols=26 Identities=27% Similarity=0.445 Sum_probs=23.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGD 724 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD 724 (1097)
++-|++.++++.|+++|++++++|..
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 45789999999999999999999975
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=82.50 E-value=1.2 Score=43.67 Aligned_cols=41 Identities=15% Similarity=0.187 Sum_probs=34.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
.++.+++.+++++|+ |+++.++|+.+...+.......|+..
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~ 132 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTD 132 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccc
Confidence 367789999999885 78999999999988888888888754
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=80.84 E-value=0.39 Score=46.66 Aligned_cols=26 Identities=12% Similarity=0.272 Sum_probs=23.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGD 724 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD 724 (1097)
++.+++.+.++.|+++|+++.++|+-
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~ 122 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNN 122 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCccHHHHHHHHHhcCCceEEeecc
Confidence 46799999999999999999999963
|