Citrus Sinensis ID: 001341
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1096 | 2.2.26 [Sep-21-2011] | |||||||
| P98205 | 1107 | Phospholipid-transporting | yes | no | 1.0 | 0.990 | 0.868 | 0.0 | |
| P70704 | 1149 | Probable phospholipid-tra | yes | no | 0.913 | 0.871 | 0.365 | 1e-180 | |
| Q29449 | 1149 | Probable phospholipid-tra | yes | no | 0.912 | 0.870 | 0.365 | 1e-178 | |
| Q9Y2Q0 | 1164 | Probable phospholipid-tra | yes | no | 0.913 | 0.859 | 0.359 | 1e-178 | |
| P98200 | 1148 | Probable phospholipid-tra | no | no | 0.913 | 0.871 | 0.352 | 1e-172 | |
| O94296 | 1258 | Probable phospholipid-tra | yes | no | 0.914 | 0.796 | 0.357 | 1e-171 | |
| Q9NTI2 | 1148 | Probable phospholipid-tra | no | no | 0.914 | 0.872 | 0.351 | 1e-170 | |
| P98198 | 1209 | Probable phospholipid-tra | no | no | 0.903 | 0.818 | 0.335 | 1e-169 | |
| P98199 | 1209 | Probable phospholipid-tra | no | no | 0.906 | 0.822 | 0.334 | 1e-168 | |
| P39524 | 1355 | Probable phospholipid-tra | yes | no | 0.913 | 0.738 | 0.344 | 1e-168 |
| >sp|P98205|ALA2_ARATH Phospholipid-transporting ATPase 2 OS=Arabidopsis thaliana GN=ALA2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1995 bits (5169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 961/1107 (86%), Positives = 1032/1107 (93%), Gaps = 11/1107 (0%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKR++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 1 MKRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 61 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 181 KMKGVIECPVPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK--- 297
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARK
Sbjct: 241 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVLVLGIAGNVWKDTEARKQWY 300
Query: 298 -----EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 352
E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 301 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 360
Query: 353 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 412
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 361 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 420
Query: 413 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 472
TSGS DVIRFLTVMA+CNTV+P +SKAG I+YKAQSQDE+ALV AA++LHMV V KNA++
Sbjct: 421 TSGSTDVIRFLTVMAICNTVLPVQSKAGDIVYKAQSQDEDALVIAASKLHMVFVGKNANL 480
Query: 473 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 532
LEI+FNGSV++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEIRFNGSVIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYARAGQQT 540
Query: 533 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 592
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 541 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 600
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 652
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 653 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 712
LL IDGKTE++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+RK F ELAILS
Sbjct: 661 LLMIDGKTEEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHRKDFVELAILS 720
Query: 713 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 772
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 773 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 832
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 781 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 840
Query: 833 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 892
SVSLMAYNVFYTS+PVLVS IDKDLSE +VMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSVPVLVSVIDKDLSEASVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 893 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 952
HAI+ FVI+IH YAYEKSEMEE+ MVALSGCIWLQAFVVA ETNSFTV QHL+IWGNLV
Sbjct: 901 HAIIVFVITIHAYAYEKSEMEELGMVALSGCIWLQAFVVAQETNSFTVLQHLSIWGNLVG 960
Query: 953 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1012
FY IN++FSAIPSSGMYTIMFRLCSQPSYWITMFLIV AGMGPI ALKYFRYTYR SKIN
Sbjct: 961 FYAINFLFSAIPSSGMYTIMFRLCSQPSYWITMFLIVGAGMGPIFALKYFRYTYRPSKIN 1020
Query: 1013 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1071
ILQQAERMGGPIL+LG IE QPR IEKD++P+SITQP++RSPVYEPLLSDSPN TRRSFG
Sbjct: 1021 ILQQAERMGGPILTLGNIETQPRTIEKDLSPISITQPKNRSPVYEPLLSDSPNATRRSFG 1080
Query: 1072 SGTPFDFFQSPSRLSSI--YSRNCKDN 1096
GTPF+FFQS SRLSS Y+RNCKDN
Sbjct: 1081 PGTPFEFFQSQSRLSSSSGYTRNCKDN 1107
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Requires an interaction with a protein of the ALIS family for activity. Specific for phosphatidylserine and has no activity with lysolipid, phosphatidylcholine or phosphatidylethanolamine. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|P70704|AT8A1_MOUSE Probable phospholipid-transporting ATPase IA OS=Mus musculus GN=Atp8a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 632 bits (1631), Expect = e-180, Method: Compositional matrix adjust.
Identities = 385/1052 (36%), Positives = 595/1052 (56%), Gaps = 51/1052 (4%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNVITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
I G IEC P++ + F GN+RL + PL +L+ LRNT+W G+ VYT
Sbjct: 215 ISGRIECESPNRHLYDFVGNIRL----DGHGTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPW 301
G++TKL P KL+ V+ + + +F I + +V +W + K+ W
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGKD--W 328
Query: 302 YELLVIP---------LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 352
Y L L F +L + +IPIS+ V+L++VK A FI+WD +M TDT
Sbjct: 329 YLHLHYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTA 388
Query: 353 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGL 408
+ A + ++E+L QV+YI +DKTGTLT N M F++C I G+ YG + GD D L
Sbjct: 389 AMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQSSQFGDEKTFNDPSL 448
Query: 409 LNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 465
L+ + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 449 LDNLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVF 507
Query: 466 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP- 524
+ + I G +YE+L LEFTS RKRMSVVV+ SG + L KGAD I
Sbjct: 508 TGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVVVR-TPSGKLRLYCKGADTVIYER 566
Query: 525 YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIA 584
A + ++ +EQ++ GLRTLC A E+ E +++EW ++ AS+++ +R ++
Sbjct: 567 LAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFEEWRAVYHRASTSVQNRLLKLE 626
Query: 585 EVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644
E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC
Sbjct: 627 ESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCRL 686
Query: 645 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRK 703
+ + ++ I+ + D +L R T+ + D A ++DG L+ AL R+
Sbjct: 687 L--KRNMGMIVINEGSLDGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQ 744
Query: 704 AFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGIS 762
F +LA+ + ICCRV+P QK+++VE++K TLAIGDG NDV MIQ A +GVGIS
Sbjct: 745 YFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGIS 804
Query: 763 GREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFI 822
G EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK++++ I+I+F+F+
Sbjct: 805 GNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRVSKCILYCFYKNIVLYIIEIWFAFV 864
Query: 823 SGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPS 881
+G SG LF + YNV +T++P L I ++ + ++++P++ Q N
Sbjct: 865 NGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPELYKTSQNALDFNTK 924
Query: 882 TFAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVV-------ALE 934
F LFH+++ F + Y + L ++ FVV LE
Sbjct: 925 VFWVHCLNGLFHSVILFWFPLKALQYGTVFGNGKTSDYLLLGNFVYTFVVITVCLKAGLE 984
Query: 935 TNSFTVFQHLAIWGNL----VAFYIINWIFSAIP----SSGMYTIMFRLCSQPSYWITMF 986
T+ +T F H+AIWG++ V F I + ++ A+P SG ++F S +W+ +
Sbjct: 985 TSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAVPMAPDMSGEAAMLF---SSGVFWVGLL 1041
Query: 987 LIVAAGMGPIVALKYFRYTYRASKINILQQAE 1018
I A + V K + T + ++ +Q+ E
Sbjct: 1042 SIPVASLLLDVLYKVIKRTAFKTLVDEVQELE 1073
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q29449|AT8A1_BOVIN Probable phospholipid-transporting ATPase IA OS=Bos taurus GN=ATP8A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 627 bits (1618), Expect = e-178, Method: Compositional matrix adjust.
Identities = 385/1053 (36%), Positives = 593/1053 (56%), Gaps = 53/1053 (5%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC P++ + F GN+RL PL +L+ LRNT+W G+ VYT
Sbjct: 215 LSGRIECESPNRHLYDFVGNIRL----DGRSTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPW 301
G++TKL P KL+ V+ + + +F I + +V +W + ++ W
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGRD--W 328
Query: 302 YELL---------VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 352
Y L + L F +L + +IPIS+ V+L++VK A FI+WD +M TDT
Sbjct: 329 YLNLNYGGANNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTA 388
Query: 353 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGL 408
+ A + ++ +L QV+YI +DKTGTLT N M F++C I G+ YG + GD D L
Sbjct: 389 AMARTSNLNVELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQNSQFGDEKTFSDSSL 448
Query: 409 LNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 465
L + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 449 LENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVF 507
Query: 466 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP- 524
+ + I G +YE+L LEFTS RKRMSV+V+ SG + L KGAD I
Sbjct: 508 TGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVR-TPSGKLRLYCKGADTVIYDR 566
Query: 525 YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIA 584
A + ++ +EQ++ GLRTLC A E+ E ++QEW ++ AS+++ +R ++
Sbjct: 567 LAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYHRASTSVQNRLLKLE 626
Query: 585 EVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644
E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC
Sbjct: 627 ESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCKL 686
Query: 645 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRK 703
++ I+ + D +L R T+ + D A ++DG L+ AL R+
Sbjct: 687 --RRKNMGMIVINEGSLDGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQ 744
Query: 704 AFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQKADIGVGIS 762
F +LA+ + ICCRV+P QK+++VE++ K TLAIGDG NDV MIQ A +GVGIS
Sbjct: 745 YFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGIS 804
Query: 763 GREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFI 822
G EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK++++ I+I+F+F+
Sbjct: 805 GNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRGSKCILYCFYKNIVLYIIEIWFAFV 864
Query: 823 SGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPS 881
+G SG LF + YNV +T++P L I ++ + ++++P++ Q N
Sbjct: 865 NGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKEYMLKYPELYKTSQNALDFNTK 924
Query: 882 TFAGWFGRSLFHAIVAFVISIHVYAYEKS-EMEEVSMVALSGCIWLQAFVV-------AL 933
F LFH+++ F + Y E S L G ++ FVV L
Sbjct: 925 VFWVHCLNGLFHSVILFWFPLKALQYGTVFENGRTSDYLLLGN-FVYTFVVITVCLKAGL 983
Query: 934 ETNSFTVFQHLAIWGNL----VAFYIINWIFSAIP----SSGMYTIMFRLCSQPSYWITM 985
ET+ +T F H+AIWG++ V F I + ++ A+P SG ++F S +W+ +
Sbjct: 984 ETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAVPMAPDMSGEAAMLF---SSGVFWMGL 1040
Query: 986 FLIVAAGMGPIVALKYFRYTYRASKINILQQAE 1018
I A + V K + T + ++ +Q+ E
Sbjct: 1041 LFIPVASLLLDVVYKVIKRTAFKTLVDEVQELE 1073
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9Y2Q0|AT8A1_HUMAN Probable phospholipid-transporting ATPase IA OS=Homo sapiens GN=ATP8A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 627 bits (1617), Expect = e-178, Method: Compositional matrix adjust.
Identities = 384/1067 (35%), Positives = 595/1067 (55%), Gaps = 66/1067 (6%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVAVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
IV + + +P DL+ + +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 EIVKVTNGEHLPADLISLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDVDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
I G IEC P++ + F GN+RL + PL +L+ LRNT+W G+ VYT
Sbjct: 215 ISGRIECESPNRHLYDFVGNIRL----DGHGTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPW 301
G++TKL P KL+ V+ + + +F I + +V +W + K+ W
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGKD--W 328
Query: 302 YELLVIP---------LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 352
Y L L F +L + +IPIS+ V+L++VK A FI+WD +M TDT
Sbjct: 329 YLNLNYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTA 388
Query: 353 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN--------------- 397
+ A + ++E+L QV+YI +DKTGTLT N M F++C I G+ YG+
Sbjct: 389 AMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGHVPEPEDYGCSPDEWQ 448
Query: 398 --ETGD--ALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQD 450
+ GD D LL + + P + FLT+MAVC+T +P + + I+Y+A S D
Sbjct: 449 NSQFGDEKTFSDSSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPD 507
Query: 451 EEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGN 510
E ALV AA QL+ V + + I G +YE+L LEFTS RKRMSV+V+ SG
Sbjct: 508 EGALVRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVR-TPSGK 566
Query: 511 ISLLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 569
+ L KGAD I A + ++ +EQ++ GLRTLC A E+ E ++QEW ++
Sbjct: 567 LRLYCKGADTVIYDRLAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVY 626
Query: 570 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTG 629
+ AS+++ +R ++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTG
Sbjct: 627 QRASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTG 686
Query: 630 DKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVV 689
DKQ TAI I SC + + ++ I+ + D +L R T+ + D A ++
Sbjct: 687 DKQETAINIGHSCKLL--KKNMGMIVINEGSLDGTRETLSRHCTTLGDALRKENDFALII 744
Query: 690 DGWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGN 747
DG L+ AL R+ F +LA+ + ICCRV+P QK+++VE++K TLAIGDG N
Sbjct: 745 DGKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVVTLAIGDGAN 804
Query: 748 DVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFY 807
DV MIQ A +GVGISG EGLQAA ++DYSI +F++LK L+++HG ++YNR + Y FY
Sbjct: 805 DVSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMIHGAWNYNRVSKCILYCFY 864
Query: 808 KSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHP 866
K++++ I+I+F+F++G SG LF + YNV +T++P L I ++ + ++++P
Sbjct: 865 KNIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYP 924
Query: 867 QILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWL 926
++ Q N F LFH+++ F + Y + + L ++
Sbjct: 925 ELYKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGTAFGNGKTSDYLLLGNFV 984
Query: 927 QAFVV-------ALETNSFTVFQHLAIWGNL----VAFYIINWIFSAIP----SSGMYTI 971
FVV LET+ +T F H+AIWG++ V F I + ++ AIP SG +
Sbjct: 985 YTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAIPMAPDMSGEAAM 1044
Query: 972 MFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAE 1018
+F S +W+ + I A + V K + T + ++ +Q+ E
Sbjct: 1045 LF---SSGVFWMGLLFIPVASLLLDVVYKVIKRTAFKTLVDEVQELE 1088
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98200|AT8A2_MOUSE Probable phospholipid-transporting ATPase IB OS=Mus musculus GN=Atp8a2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 605 bits (1561), Expect = e-172, Method: Compositional matrix adjust.
Identities = 376/1068 (35%), Positives = 585/1068 (54%), Gaps = 67/1068 (6%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R IY+N ++ +C NR+S KY+++ FLP+ L+EQ R N +FL IA LQ ++
Sbjct: 16 RIIYLNQSHLNK--FCDNRISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPDVS 73
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+ I ++ KE +D+ R+ +D N+K+ V++ G+ I +++ VG
Sbjct: 74 PTGRYTTLVPLVIILTIAGIKEIIEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVAVG 133
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDF-ELLHK 181
+IV + +P D+VL +S+PQG+CYVETA LDGET+LK R + M ++L K
Sbjct: 134 DIVKVLNGQYLPADMVLFSSSEPQGMCYVETANLDGETNLKIRQGLSHTTDMQTRDVLMK 193
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC GP++ + F GNL L L +L+ LRNT+W GV VYT
Sbjct: 194 LSGRIECEGPNRHLYDFTGNLHL----DGKSSVALGPDQILLRGTQLRNTQWVFGVVVYT 249
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPW 301
G+++KL K + V+ + + +F +V+ +V W + K W
Sbjct: 250 GHDSKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALFWNGSHGGKS--W 307
Query: 302 Y---------ELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 352
Y L F +L + +IPIS+ V+L++VK A FI+WD +M E DTP
Sbjct: 308 YIKKMDTNSDNFGYNLLTFIILYNNLIPISLLVTLEVVKYTQALFINWDMDMYYIENDTP 367
Query: 353 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG---------------- 396
+ A + ++E+L QV+Y+ +DKTGTLT N M F++C I G+ YG
Sbjct: 368 AMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELAREQSSDDFCR 427
Query: 397 -----NETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQS 448
N++ D D LL I P + FLT++AVC+TV+P K I+Y+A S
Sbjct: 428 MTSCTNDSCD-FNDPRLLKNIEDQHPTAPCIQEFLTLLAVCHTVVPEKD-GDEIIYQASS 485
Query: 449 QDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHS 508
DE ALV A +L V + + I+ G + IL LEF+SDRKRMSV+V+ S
Sbjct: 486 PDEAALVKGAKKLGFVFTGRTPYSVIIEAMGQEQTFGILNVLEFSSDRKRMSVIVR-LPS 544
Query: 509 GNISLLSKGADEAILPYAHAGQQTRTFVEA---VEQYSQLGLRTLCLAWREVEEDEYQEW 565
G + L KGAD I + + ++ E +E ++ GLRTLC+A+ ++ E+EY+EW
Sbjct: 545 GQLRLYCKGADNVI--FERLSKDSKYMEETLCHLEYFATEGLRTLCVAYADLSENEYEEW 602
Query: 566 SLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFW 625
+++EAS L DR R+ E + +E +L +LG TAIEDRLQ GVPETI TL KA I W
Sbjct: 603 LKVYQEASIILKDRAQRLEECYEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIKIW 662
Query: 626 MLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 685
+LTGDKQ TAI I SC +S LL D + D ++ + + + DV
Sbjct: 663 VLTGDKQETAINIGYSCRLVSQNMALILLKED--SLDATRAAITQHCTDLGNLLGKENDV 720
Query: 686 AFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIG 743
A ++DG L+ AL R++F +LA+ + ICCRV+P QK+++V+++K TLAIG
Sbjct: 721 ALIIDGHTLKYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVDVVKKRVKAITLAIG 780
Query: 744 DGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQ 803
DG NDV MIQ A +GVGISG EG+QA +DY+I +F +L++L+LVHG +SYNR
Sbjct: 781 DGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTKCIL 840
Query: 804 YSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTV 862
Y FYK++++ I+++F+F++G SG LF + YNV +T++P I ++ ++ ++
Sbjct: 841 YCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERSCTQESM 900
Query: 863 MQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYE-------KSEMEEV 915
++ PQ+ Q N F G +L H+++ F + + ++ ++ V
Sbjct: 901 LRFPQLYRITQNAEGFNTKVFWGHCINALVHSLILFWVPMKALEHDTPVTSGHATDYLFV 960
Query: 916 SMVALSGCIWLQAFVVALETNSFTVFQHLAIWGN----LVAFYIINWIFSAIP-SSGMYT 970
+ + + LET ++T F HLA+WG+ LV F + + I+ IP + M
Sbjct: 961 GNIVYTYVVVTVCLKAGLETTAWTKFSHLAVWGSMLIWLVFFGVYSTIWPTIPIAPDMKG 1020
Query: 971 IMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAE 1018
+ S +W+ +FL+ A + VA + ++T + + + +Q+ E
Sbjct: 1021 QATMVLSSAYFWLGLFLVPTACLIEDVAWRAAKHTCKKTLLEEVQELE 1068
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|O94296|YOOC_SCHPO Probable phospholipid-transporting ATPase C887.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.12 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 382/1068 (35%), Positives = 593/1068 (55%), Gaps = 66/1068 (6%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I +ND S + + N +S KY+ FLPK L EQFS++ N +FL A +Q IT
Sbjct: 145 RQIILND--YSANHFLHNAVSTCKYSAFTFLPKFLKEQFSKYANLFFLFTAVVQQIPGIT 202
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
PVN +T GP++ + +VS KE +D R D++ NE +V++ Q +D+ VG
Sbjct: 203 PVNRYTTIGPMLIVLSVSGIKEIMEDIKRKKQDQELNESPCYVLQGTGFVEKQWKDVVVG 262
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR-LIPAACMGMDFELLHK 181
+IV + P DLVL+ +S+P+G+CY+ETA LDGET+LK + +P + L +
Sbjct: 263 DIVKIVSETFFPADLVLLSSSEPEGLCYIETANLDGETNLKIKQALPETAGLLKPVELGQ 322
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G ++ P+ ++ FD L+LLP D ++ PL+ +L+ LRNT W G+ V+T
Sbjct: 323 LSGEVKSEQPNNNLYTFDATLKLLPS--DREL-PLSPDQLLLRGAQLRNTPWVYGIVVFT 379
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDK---LTGAIFVF--------QIVVVIVLGTAGNVW 290
G+E+KL K T+V+ ++ IFVF ++ V G+A +
Sbjct: 380 GHESKLMKNTTETPIKRTSVEKQVNSQILFLLCIFVFLCFASSLGALIHRSVYGSALSYV 439
Query: 291 KDTEARKEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETD 350
K T R + LL F +L S ++PIS+ V+ +LV+ + A+ I D +M + ETD
Sbjct: 440 KYTSNRAGMFFKGLLT----FWILYSNLVPISLFVTFELVRYIQAQLISSDLDMYNEETD 495
Query: 351 TPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN------------- 397
TP+ +++ E+L QV YI +DKTGTLT N+M FR+C I G+ Y +
Sbjct: 496 TPAACRTSSLVEELGQVGYIFSDKTGTLTRNQMEFRQCTIAGVAYADVIPEDRQFTSEDL 555
Query: 398 ETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKA-GAILYKAQSQDEEA 453
++ + D L S + + +FL V+++C+TVIP ++ +I Y+A S DE A
Sbjct: 556 DSDMYIYDFDTLKENLKHSENASLIHQFLLVLSICHTVIPEYDESTNSIKYQASSPDEGA 615
Query: 454 LVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISL 513
LV AA + + + ++ + G YE+L EF S RKRMS+V + C G I L
Sbjct: 616 LVKGAASIGYKFLARKPHLVTVSIFGKDESYELLHICEFNSTRKRMSIVFR-CPDGKIRL 674
Query: 514 LSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEA 572
KGAD I+ A +T + +E Y+ +GLRTLC+A REV EDEYQ WS +F+ A
Sbjct: 675 YVKGADTVIMERLASDNPYLQTTIHHLEDYATVGLRTLCIAMREVPEDEYQRWSTVFETA 734
Query: 573 SSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQ 632
+S+L+DR ++ + + +E DL +LG TAIEDRLQDGVP+TI TL+ AGI W+LTGD+Q
Sbjct: 735 ASSLVDRAQKLMDAAEEIEKDLILLGATAIEDRLQDGVPDTISTLQTAGIKIWVLTGDRQ 794
Query: 633 NTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM---RITTSEPKDVAFVV 689
TAI I +SC I E G L+ ++ +T++ S+ L ++ TT + +A V+
Sbjct: 795 ETAINIGMSCKLID-EDMG-LVIVNEETKEATAESVMAKLSSIYRNEATTGNVESMALVI 852
Query: 690 DGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRTLAIGDGGN 747
DG +L AL + F ELA L R ICCRV+P QKA +V+++K + LAIGDG N
Sbjct: 853 DGVSLTYALDFSLERRFFELASLCRAVICCRVSPLQKALIVKMVKRNTGEVLLAIGDGAN 912
Query: 748 DVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFY 807
DV MIQ A +GVGISG EGLQA R++D+SI +F +LK+L+LVHG + Y R + L YSFY
Sbjct: 913 DVPMIQAAHVGVGISGMEGLQAVRSSDFSISQFCYLKKLLLVHGSWCYQRLSKLILYSFY 972
Query: 808 KSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSI-PVLVSTIDKDLSEGTVMQHP 866
K++ + Q +++F + SG +F S S+ YNV +T + PV++ D+ +S G + Q+P
Sbjct: 973 KNIALYMTQFWYAFCNAFSGQVIFESWSISLYNVLFTVLPPVVIGIFDQFVSAGQLFQYP 1032
Query: 867 QILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIW- 925
Q+ Q N F W +H+++ F+ SI V+ Y+ + +A +W
Sbjct: 1033 QLYQLGQRSEFFNLKRFWSWITNGFYHSLLLFLCSIAVFYYDGPNKDG---LASGHWVWG 1089
Query: 926 --LQAFVV-------ALETNSFTVFQHLAIWGNLVAFYIINWIFS-AIPSSGM----YTI 971
L A ++ AL +N +T + +A G+ + + + I++ A P+ G Y I
Sbjct: 1090 TTLYAAILATVLGKAALISNHWTQYTVIATLGSFLLWIVFMPIYAVAAPAIGFSKEYYGI 1149
Query: 972 MFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAER 1019
+ L +W ++ ++ + KY Y + + +Q+ ++
Sbjct: 1150 IPHLYGNLKFWASLLVLPTIALMRDFVWKYSSRMYYPEEYHYVQEIQK 1197
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of phospholipids. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9NTI2|AT8A2_HUMAN Probable phospholipid-transporting ATPase IB OS=Homo sapiens GN=ATP8A2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 598 bits (1543), Expect = e-170, Method: Compositional matrix adjust.
Identities = 375/1067 (35%), Positives = 585/1067 (54%), Gaps = 65/1067 (6%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R IY+N ++ + N++S KY+++ FLP+ L+EQ R N +FL IA LQ ++
Sbjct: 16 RTIYLNQPHLNK--FRDNQISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPDVS 73
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PLI I ++ KE +D+ R+ +D N+K+ V++ G+ I +++ VG
Sbjct: 74 PTGRYTTLVPLIIILTIAGIKEIVEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVAVG 133
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDF-ELLHK 181
+IV + +P D+VL+ +S+PQ +CYVETA LDGET+LK R + M E+L K
Sbjct: 134 DIVKVVNGQYLPADVVLLSSSEPQAMCYVETANLDGETNLKIRQGLSHTADMQTREVLMK 193
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC GP++ + F GNL L + L +L+ LRNT+W G+ VYT
Sbjct: 194 LSGTIECEGPNRHLYDFTGNLNL----DGKSLVALGPDQILLRGTQLRNTQWVFGIVVYT 249
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPW 301
G++TKL K + V+ + + +F +V+ +V W + K W
Sbjct: 250 GHDTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSAGALYWNRSHGEKN--W 307
Query: 302 Y---------ELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 352
Y L F +L + +IPIS+ V+L++VK A FI+WD +M DTP
Sbjct: 308 YIKKMDTTSDNFGYNLLTFIILYNNLIPISLLVTLEVVKYTQALFINWDTDMYYIGNDTP 367
Query: 353 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN--------ETGDALK 404
+ A + ++E+L QV+Y+ +DKTGTLT N M F++C I G+ YG+ + D +
Sbjct: 368 AMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELAREPSSDDFCR 427
Query: 405 ------------DVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQ 449
D LL I P + FLT++AVC+TV+P K I+Y+A S
Sbjct: 428 MPPPCSDSCDFDDPRLLKNIEDRHPTAPCIQEFLTLLAVCHTVVPEKD-GDNIIYQASSP 486
Query: 450 DEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSG 509
DE ALV A +L V + + I+ G + IL LEF+SDRKRMSV+V+ SG
Sbjct: 487 DEAALVKGAKKLGFVFTARTPFSVIIEAMGQEQTFGILNVLEFSSDRKRMSVIVR-TPSG 545
Query: 510 NISLLSKGADEAILPYAHAGQQTRTFVEA---VEQYSQLGLRTLCLAWREVEEDEYQEWS 566
+ L KGAD I + + ++ E +E ++ GLRTLC+A+ ++ E+EY+EW
Sbjct: 546 RLRLYCKGADNVI--FERLSKDSKYMEETLCHLEYFATEGLRTLCVAYADLSENEYEEWL 603
Query: 567 LMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWM 626
+++EAS+ L DR R+ E + +E +L +LG TAIEDRLQ GVPETI TL KA I W+
Sbjct: 604 KVYQEASTILKDRAQRLEECYEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIKIWV 663
Query: 627 LTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVA 686
LTGDKQ TAI I SC +S LL D + D ++ + + + DVA
Sbjct: 664 LTGDKQETAINIGYSCRLVSQNMALILLKED--SLDATRAAITQHCTDLGNLLGKENDVA 721
Query: 687 FVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGD 744
++DG L+ AL R++F +LA+ + ICCRV+P QK+++V+++K TLAIGD
Sbjct: 722 LIIDGHTLKYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVDVVKKRVKAITLAIGD 781
Query: 745 GGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQY 804
G NDV MIQ A +GVGISG EG+QA +DY+I +F +L++L+LVHG +SYNR Y
Sbjct: 782 GANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTKCILY 841
Query: 805 SFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVM 863
FYK++++ I+++F+F++G SG LF + YNV +T++P I ++ ++ +++
Sbjct: 842 CFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERSCTQESML 901
Query: 864 QHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYE-------KSEMEEVS 916
+ PQ+ Q G N F G +L H+++ F + ++ ++ V
Sbjct: 902 RFPQLYKITQNGEGFNTKVFWGHCINALVHSLILFWFPMKALEHDTVLTSGHATDYLFVG 961
Query: 917 MVALSGCIWLQAFVVALETNSFTVFQHLAIWGN----LVAFYIINWIFSAIP-SSGMYTI 971
+ + + LET ++T F HLA+WG+ LV F I + I+ IP + M
Sbjct: 962 NIVYTYVVVTVCLKAGLETTAWTKFSHLAVWGSMLTWLVFFGIYSTIWPTIPIAPDMRGQ 1021
Query: 972 MFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAE 1018
+ S +W+ +FL+ A + VA + ++T + + + +Q+ E
Sbjct: 1022 ATMVLSSAHFWLGLFLVPTACLIEDVAWRAAKHTCKKTLLEEVQELE 1068
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98198|AT8B2_HUMAN Probable phospholipid-transporting ATPase ID OS=Homo sapiens GN=ATP8B2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 595 bits (1534), Expect = e-169, Method: Compositional matrix adjust.
Identities = 365/1088 (33%), Positives = 587/1088 (53%), Gaps = 98/1088 (9%)
Query: 2 KRYIYINDDETSQDL-YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
+R ND E ++ Y +N + KY ++ FLP NL+EQF N YFL + LQL
Sbjct: 32 ERRARANDREYNEKFQYASNCIKTSKYNILTFLPVNLFEQFQEVANTYFLFLLILQLIPQ 91
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
I+ ++ +T PL+ + ++A K+A DDY R+ SD + N ++ V+ GI + Q ++
Sbjct: 92 ISSLSWFTTIVPLVLVLTITAVKDATDDYFRHKSDNQVNNRQSQVLINGILQQEQWMNVC 151
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR-LIPAACMGMDFELL 179
VG+I+ L N V DL+L+ +S+P G+CY+ETA LDGET++K R IP D L
Sbjct: 152 VGDIIKLENNQFVAADLLLLSSSEPHGLCYIETAELDGETNMKVRQAIPVTSELGDISKL 211
Query: 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239
K G + C P+ + +F G L + + PL+ +N +L+ C LRNTEW G+ +
Sbjct: 212 AKFDGEVICEPPNNKLDKFSGTL-----YWKENKFPLSNQNMLLRGCVLRNTEWCFGLVI 266
Query: 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK-- 297
+ G +TKL G + K T++D +++ L IF F + + ++L +W+ +
Sbjct: 267 FAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGMRFQ 326
Query: 298 -EFPWYELLVIPL--------RFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPE 348
PW E + + ++ + ++PIS+ VS+++++ ++ FI+WD +M +
Sbjct: 327 VYLPWDEAVDSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDKKMFCMK 386
Query: 349 TDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN---------ET 399
TP+ A T ++E+L QVEYI +DKTGTLT+N M+F +C I G YG+ E
Sbjct: 387 KRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFNKCSINGHSYGDVFDVLGHKAEL 446
Query: 400 GDALK-----------------DVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAI 442
G+ + D LL A+ G P F ++++C+TV+ + G +
Sbjct: 447 GERPEPVDFSFNPLADKKFLFWDPSLLEAVKIGDPHTHEFFRLLSLCHTVMSEEKNEGEL 506
Query: 443 LYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVV 502
YKAQS DE ALV AA V ++ + + G+ + Y++L L+F + RKRMSV+
Sbjct: 507 YYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHEMGTAITYQLLAILDFNNIRKRMSVI 566
Query: 503 VKDCHSGNISLLSKGADEAILPYAHAGQQT--RTFVEAVEQYSQLGLRTLCLAWREVEED 560
V++ G I L KGAD +L H Q T ++ + +Y+ GLRTL LA+++++E+
Sbjct: 567 VRN-PEGKIRLYCKGADTILLDRLHHSTQELLNTTMDHLNEYAGEGLRTLVLAYKDLDEE 625
Query: 561 EYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 620
Y+EW+ +AS RE R+A + + +E+++ +LG TAIED+LQ GVPETI L A
Sbjct: 626 YYEEWAERRLQASLAQDSREDRLASIYEEVENNMMLLGATAIEDKLQQGVPETIALLTLA 685
Query: 621 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM----- 675
I W+LTGDKQ TA+ I SC ++ + ++ + G T EV L + M
Sbjct: 686 NIKIWVLTGDKQETAVNIGYSCKMLT-DDMTEVFIVTGHTVLEVREELRKAREKMMDSSR 744
Query: 676 ----------RITTSEPKDV--------AFVVDGWALEIALK-HYRKAFTELAILSRTAI 716
++++S+ V A V++G +L AL+ F E A + I
Sbjct: 745 SVGNGFTYQDKLSSSKLTSVLEAVAGEYALVINGHSLAHALEADMELEFLETACACKAVI 804
Query: 717 CCRVTPSQKAQLVELLKSCDYR---TLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 773
CCRVTP QKAQ+VEL+K Y+ TLAIGDG NDV MI+ A IGVGISG+EG+QA A+
Sbjct: 805 CCRVTPLQKAQVVELVKK--YKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLAS 862
Query: 774 DYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNS 833
DYS +F+FL+RL+LVHGR+SY R Y FYK+ + +F F G S ++++
Sbjct: 863 DYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQ 922
Query: 834 VSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 892
+ YN+ YTS+PVL + D+D+ E M++P++ Q L N F + ++
Sbjct: 923 YFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIY 982
Query: 893 HAIVAFVISIHVYA-------YEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLA 945
+++ F I V+A + ++ + ++ + + + + + L+T +T H
Sbjct: 983 TSVLMFFIPYGVFADATRDDGTQLADYQSFAVTVATSLVIVVSVQIGLDTGYWTAINHFF 1042
Query: 946 IWGNLVAFYIINWIFSAIPSSGMYTIM---FRLC-------SQPSYWITMFLIVAAGMGP 995
IWG+L ++ I A+ S+G++ + FR +QP+ W+T+ L + P
Sbjct: 1043 IWGSLAVYFA---ILFAMHSNGLFDMFPNQFRFVGNAQNTLAQPTVWLTIVLTTVVCIMP 1099
Query: 996 IVALKYFR 1003
+VA ++ R
Sbjct: 1100 VVAFRFLR 1107
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98199|AT8B2_MOUSE Probable phospholipid-transporting ATPase ID OS=Mus musculus GN=Atp8b2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 593 bits (1528), Expect = e-168, Method: Compositional matrix adjust.
Identities = 365/1092 (33%), Positives = 587/1092 (53%), Gaps = 98/1092 (8%)
Query: 2 KRYIYINDDETSQDL-YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
+R ND E ++ Y +N + KY ++ FLP NL+EQF N YFL + LQL
Sbjct: 32 ERRARANDREYNEKFQYASNCIKTSKYNIVTFLPVNLFEQFQEVANTYFLFLLILQLIPQ 91
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
I+ ++ +T PL+ + ++A K+A DDY R+ SD + N + V+ G+ + Q ++
Sbjct: 92 ISSLSWFTTIVPLVLVLTITAVKDATDDYFRHKSDNQVNNRHSQVLINGVLQQEQWMNVC 151
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR-LIPAACMGMDFELL 179
VG+I+ L N V DL+L+ +S+P G+CY+ETA LDGET++K R IP D L
Sbjct: 152 VGDIIKLENNQFVAADLLLLSSSEPHGLCYIETAELDGETNMKVRQAIPVTSELGDVSQL 211
Query: 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239
+ G + C P+ + +F G L + + PL+ +N +L+ C LRNTEW G+ +
Sbjct: 212 ARFDGEVICEPPNNKLDKFSGTL-----YWKENKFPLSNQNMLLRGCVLRNTEWCFGLVI 266
Query: 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKD---TEAR 296
+ G +TKL G + K T++D +++ L IF F + + ++L +W+ T +
Sbjct: 267 FAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGTRFQ 326
Query: 297 KEFPWYELLVIPL--------RFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPE 348
PW E + + ++ + ++PIS+ VS+++++ ++ FI+WD +M +
Sbjct: 327 VYLPWDEAVDSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDKKMFCMK 386
Query: 349 TDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN---------ET 399
TP+ A T ++E+L QVEYI +DKTGTLT+N M+F +C I G YG+ E
Sbjct: 387 KRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFNKCSINGHSYGDVFDVLGHKAEL 446
Query: 400 GDALK-----------------DVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAI 442
G+ + D LL A+ G P F ++++C+TV+ + G +
Sbjct: 447 GERPEPVDFSFNPLADKKFLFWDSSLLEAVKMGDPHTHEFFRLLSLCHTVMSEEKNEGEL 506
Query: 443 LYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVV 502
YKAQS DE ALV AA V ++ + + G+ + Y++L L+F + RKRMSV+
Sbjct: 507 YYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHELGTAITYQLLAILDFNNIRKRMSVI 566
Query: 503 VKDCHSGNISLLSKGADEAILPYAHAGQQT--RTFVEAVEQYSQLGLRTLCLAWREVEED 560
V++ G I L KGAD +L H Q + + + +Y+ GLRTL LA+++++E+
Sbjct: 567 VRN-PEGKIRLYCKGADTILLDRLHPPTQELLSSTTDHLNEYAGDGLRTLVLAYKDLDEE 625
Query: 561 EYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 620
Y+EW+ +AS RE R+A + + +E D+ +LG TAIED+LQ GVPETI L A
Sbjct: 626 YYEEWARRRLQASLAQDSREDRLASIYEEVESDMMLLGATAIEDKLQQGVPETIALLTLA 685
Query: 621 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM----- 675
I W+LTGDKQ TA+ I SC ++ + ++ + G T EV L + M
Sbjct: 686 NIKIWVLTGDKQETAVNIGYSCKMLT-DDMTEVFVVTGHTVLEVREELRKARKKMVDSSH 744
Query: 676 ----------RITTSEPKDV--------AFVVDGWALEIALK-HYRKAFTELAILSRTAI 716
+++S+ V A V++G +L AL+ F E A + I
Sbjct: 745 AVGNGFTYQGNLSSSKLTSVLEAVAGEYALVINGHSLAHALEADMELEFLETACACKAVI 804
Query: 717 CCRVTPSQKAQLVELLKSCDYR---TLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 773
CCRVTP QKAQ+VEL+K Y+ TLAIGDG NDV MI+ A IGVGISG+EG+QA A+
Sbjct: 805 CCRVTPLQKAQVVELVKK--YKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLAS 862
Query: 774 DYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNS 833
DYS +F+FL+RL+LVHGR+SY R Y FYK+ + +F F G S ++++
Sbjct: 863 DYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQ 922
Query: 834 VSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 892
+ YN+ YTS+PVL + D+D+ E M++P++ Q L N F + ++
Sbjct: 923 YFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIY 982
Query: 893 HAIVAFVISIHVYA-------YEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLA 945
+++ F I V+A + ++ + ++ + + + + + L+T +T H
Sbjct: 983 TSVLMFFIPYGVFAEATRDDGTQLADYQSFAVTVATSLVIVVSVQIGLDTGYWTAINHFF 1042
Query: 946 IWGNLVAFYIINWIFSAIPSSGMYTIM---FRLC-------SQPSYWITMFLIVAAGMGP 995
IWG+L ++ I A+ S+G++ + FR +QP+ W+T+ L A + P
Sbjct: 1043 IWGSLAVYFA---ILFAMHSNGLFDMFPNQFRFVGNAQNTLAQPTVWLTIALTTAVCIMP 1099
Query: 996 IVALKYFRYTYR 1007
+VA ++ R + +
Sbjct: 1100 VVAFRFLRLSLK 1111
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P39524|ATC3_YEAST Probable phospholipid-transporting ATPase DRS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DRS2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 592 bits (1525), Expect = e-168, Method: Compositional matrix adjust.
Identities = 371/1077 (34%), Positives = 591/1077 (54%), Gaps = 76/1077 (7%)
Query: 3 RYIYINDDETSQDL-YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLI 61
R I+IND + Y N +S KY FLPK L+++FS++ N +FL + +Q +
Sbjct: 183 RVIHINDSLANSSFGYSDNHISTTKYNFATFLPKFLFQEFSKYANLFFLCTSAIQQVPHV 242
Query: 62 TPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQ--DI 119
+P N +T G L+ + VSA KE +D R SDK+ N + + ++ + DI
Sbjct: 243 SPTNRYTTIGTLLVVLIVSAMKECIEDIKRANSDKELNNSTAEIFSEAHDDFVEKRWIDI 302
Query: 120 RVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMG-MDFEL 178
RVG+I+ ++ + +P D +++ +S+P+G+CY+ETA LDGET+LK + +D +
Sbjct: 303 RVGDIIRVKSEEPIPADTIILSSSEPEGLCYIETANLDGETNLKIKQSRVETAKFIDVKT 362
Query: 179 LHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238
L + G + P+ + ++G + L ++ PL+ IL+ LRNT W G+
Sbjct: 363 LKNMNGKVVSEQPNSSLYTYEGTMTL-----NDRQIPLSPDQMILRGATLRNTAWIFGLV 417
Query: 239 VYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKE 298
++TG+ETKL K TAV+ +I++ A+F ++V+I++ + GNV T K
Sbjct: 418 IFTGHETKLLRNATATPIKRTAVEKIINRQIIALFTV-LIVLILISSIGNVIMSTADAKH 476
Query: 299 FPWYELLVIP---------LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 349
+ L L F +L S ++PIS+ V+++L+K A I D ++ +T
Sbjct: 477 LSYLYLEGTNKAGLFFKDFLTFWILFSNLVPISLFVTVELIKYYQAFMIGSDLDLYYEKT 536
Query: 350 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY-------------- 395
DTP+ +++ E+L Q+EYI +DKTGTLT N M F+ C I G Y
Sbjct: 537 DTPTVVRTSSLVEELGQIEYIFSDKTGTLTRNIMEFKSCSIAGHCYIDKIPEDKTATVED 596
Query: 396 GNETG----DALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDE 451
G E G D LK L + SP + FLT++A C+TVIP G+I Y+A S DE
Sbjct: 597 GIEVGYRKFDDLKK-KLNDPSDEDSPIINDFLTLLATCHTVIPEFQSDGSIKYQAASPDE 655
Query: 452 EALVHAAAQL--HMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSG 509
ALV A L ++ N+ + ++ G +Y++L EF S RKRMS + + G
Sbjct: 656 GALVQGGADLGYKFIIRKPNSVTVLLEETGEEKEYQLLNICEFNSTRKRMSAIFR-FPDG 714
Query: 510 NISLLSKGADEAILPY--AHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSL 567
+I L KGAD IL A Q + +E Y+ GLRTLCLA R++ E EY+EW+
Sbjct: 715 SIKLFCKGADTVILERLDDEANQYVEATMRHLEDYASEGLRTLCLAMRDISEGEYEEWNS 774
Query: 568 MFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWML 627
++ EA++TL +R ++ E +E +L ++G TAIED+LQDGVPETI TL++AGI W+L
Sbjct: 775 IYNEAATTLDNRAEKLDEAANLIEKNLILIGATAIEDKLQDGVPETIHTLQEAGIKIWVL 834
Query: 628 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRS-LERV--LLTMRITTSEPKD 684
TGD+Q TAI I +SC +S + LL I+ +T D+ R+ LE++ L +++T +
Sbjct: 835 TGDRQETAINIGMSCRLLSEDM--NLLIINEETRDDTERNLLEKINALNEHQLSTHDMNT 892
Query: 685 VAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRTLAI 742
+A V+DG +L AL+ +A L + ICCRV+P QKA +V+++K LAI
Sbjct: 893 LALVIDGKSLGFALEPELEDYLLTVAKLCKAVICCRVSPLQKALVVKMVKRKSSSLLLAI 952
Query: 743 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS 802
GDG NDV MIQ A +GVGISG EG+QAAR+AD ++G+F+FLK+L+LVHG +SY R +
Sbjct: 953 GDGANDVSMIQAAHVGVGISGMEGMQAARSADIAVGQFKFLKKLLLVHGSWSYQRISVAI 1012
Query: 803 QYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTS-IPVLVSTIDKDLSEGT 861
YSFYK+ + Q ++ F + SG S+ S ++ YN+F+T P ++ D+ +S
Sbjct: 1013 LYSFYKNTALYMTQFWYVFANAFSGQSIMESWTMSFYNLFFTVWPPFVIGVFDQFVSSRL 1072
Query: 862 VMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAY--------EKSEME 913
+ ++PQ+ Q G+ + F GW FH+ + F+ +I +Y Y E ++
Sbjct: 1073 LERYPQLYKLGQKGQFFSVYIFWGWIINGFFHSAIVFIGTILIYRYGFALNMHGELADHW 1132
Query: 914 EVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSAI-PSSGM---- 968
+ + + + AL TN +T F +AI G+L+ + I I+++I P + +
Sbjct: 1133 SWGVTVYTTSVIIVLGKAALVTNQWTKFTLIAIPGSLLFWLIFFPIYASIFPHANISREY 1192
Query: 969 YTIMFRLCSQPSYWITMFLIVAAGMGPIVAL------KYFRYTYRASKINILQQAER 1019
Y ++ +W+T+ ++ PI AL KY++ Y +++Q+ ++
Sbjct: 1193 YGVVKHTYGSGVFWLTLIVL------PIFALVRDFLWKYYKRMYEPETYHVIQEMQK 1243
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of phospholipids (Potential). Seems to be involved in ribosome assembly. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1096 | ||||||
| 356543847 | 1107 | PREDICTED: phospholipid-transporting ATP | 1.0 | 0.990 | 0.867 | 0.0 | |
| 356549902 | 1106 | PREDICTED: phospholipid-transporting ATP | 1.0 | 0.990 | 0.862 | 0.0 | |
| 224132912 | 1107 | aminophospholipid ATPase [Populus tricho | 1.0 | 0.990 | 0.874 | 0.0 | |
| 225446426 | 1105 | PREDICTED: phospholipid-transporting ATP | 1.0 | 0.991 | 0.887 | 0.0 | |
| 302143322 | 1135 | unnamed protein product [Vitis vinifera] | 1.0 | 0.965 | 0.864 | 0.0 | |
| 334188194 | 1107 | phospholipid-translocating ATPase [Arabi | 1.0 | 0.990 | 0.868 | 0.0 | |
| 334188192 | 1139 | phospholipid-translocating ATPase [Arabi | 1.0 | 0.962 | 0.866 | 0.0 | |
| 297794981 | 1096 | hypothetical protein ARALYDRAFT_356659 [ | 0.989 | 0.989 | 0.861 | 0.0 | |
| 449478968 | 1103 | PREDICTED: LOW QUALITY PROTEIN: phosphol | 0.997 | 0.990 | 0.853 | 0.0 | |
| 449438125 | 1112 | PREDICTED: LOW QUALITY PROTEIN: phosphol | 0.997 | 0.982 | 0.847 | 0.0 |
| >gi|356543847|ref|XP_003540371.1| PREDICTED: phospholipid-transporting ATPase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2029 bits (5257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 960/1107 (86%), Positives = 1041/1107 (94%), Gaps = 11/1107 (0%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YI+DDE+S D+YC NR+SNRKYT++NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYIDDDESSHDIYCDNRISNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNP STWGPLIFIFAVSA+KEAWDDYNRYLSDKKANEKEVWVVK+GIKK IQ+QD+
Sbjct: 61 ITPVNPVSTWGPLIFIFAVSASKEAWDDYNRYLSDKKANEKEVWVVKKGIKKHIQAQDVH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVLIGTSDPQGVCY+ETAALDGETDLKTR+IP+ACMG+D +LLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYIETAALDGETDLKTRVIPSACMGIDVDLLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDND+CPLTIKNTILQSCYLRNTEWACGVAVY
Sbjct: 181 KIKGVIECPYPDKDIRRFDANMRLFPPFIDNDICPLTIKNTILQSCYLRNTEWACGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK--- 297
TGNETK+GM RGIPEPKLTA+DAMIDKLTGAIF+FQIVVV+VLG AGNVWKDTEA+K
Sbjct: 241 TGNETKMGMCRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVLVLGIAGNVWKDTEAKKLWY 300
Query: 298 -----EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 352
E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD++MID ET P
Sbjct: 301 VLYPHEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDLETSIP 360
Query: 353 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 412
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI G FYGNE GDALKDV LLNA+
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGNFYGNENGDALKDVELLNAV 420
Query: 413 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 472
+SGS DV+RFLTVMA+CNTVIP +SK G ILYKAQSQDE+ALVHAA++LHMV NK+ +I
Sbjct: 421 SSGSSDVVRFLTVMAICNTVIPTQSKTGDILYKAQSQDEDALVHAASRLHMVYFNKSGNI 480
Query: 473 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 532
LE+KF+ S+LQYE+LETLEFTSDRKRMSVV+KDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEVKFSTSILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYARAGQQT 540
Query: 533 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 592
R F+EAVEQY+ LGLRTLCLAWRE++ DEY+EWSLMFKEASSTL+DREWR+AEVCQR+EH
Sbjct: 541 RHFIEAVEQYAHLGLRTLCLAWRELKRDEYREWSLMFKEASSTLVDREWRVAEVCQRVEH 600
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 652
DL++LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 653 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 712
LLSIDGKTE+EVCRSLERVL TMRITTSEPKDVAFVVDGWALEIAL HYRKAFTELA+LS
Sbjct: 661 LLSIDGKTEEEVCRSLERVLRTMRITTSEPKDVAFVVDGWALEIALTHYRKAFTELAVLS 720
Query: 713 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 772
RTAICCRVTPSQKAQLV++LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 773 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 832
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 840
Query: 833 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 892
SVSLMAYNVFYTS+PVLVS +DKDLSE TVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSVPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 893 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 952
HAIV FVISIH YA++KSEMEEVSMVALSGCIWLQAFVV +ETNSFT+ QH+AIWGNL A
Sbjct: 901 HAIVVFVISIHAYAFDKSEMEEVSMVALSGCIWLQAFVVTMETNSFTILQHMAIWGNLAA 960
Query: 953 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1012
FY+INWIFS +PSSGMYTIMFRLC QPSYWI +FL+VAAGMGPI+A+KYFRYTYR SKIN
Sbjct: 961 FYVINWIFSTLPSSGMYTIMFRLCRQPSYWIAIFLMVAAGMGPILAIKYFRYTYRPSKIN 1020
Query: 1013 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1071
LQQAER+GGPILSLGTIEPQPR+IEKDV+ LSITQP++R+PVYEPLLSDSPN +RRSFG
Sbjct: 1021 TLQQAERLGGPILSLGTIEPQPRSIEKDVSTLSITQPKNRNPVYEPLLSDSPNASRRSFG 1080
Query: 1072 SGTPFDFFQ--SPSRLSSIYSRNCKDN 1096
+GTPFDFFQ S +SS Y+RNCKDN
Sbjct: 1081 AGTPFDFFQSQSRLSVSSSYTRNCKDN 1107
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356549902|ref|XP_003543329.1| PREDICTED: phospholipid-transporting ATPase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2020 bits (5233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 954/1106 (86%), Positives = 1035/1106 (93%), Gaps = 10/1106 (0%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YI+DDE+S D+YC NR+SNRKYT++NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYIDDDESSHDIYCDNRISNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNP STWGPLIFIFAVSA+KEAWDDYNRYLSD KANEKEVWVVK+GIKK IQ+QDI
Sbjct: 61 ITPVNPVSTWGPLIFIFAVSASKEAWDDYNRYLSDNKANEKEVWVVKKGIKKHIQAQDIH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVLIGTSDPQGVCY+ETAALDGETDLKTR+IP+AC+G+D +LLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYIETAALDGETDLKTRVIPSACVGIDVDLLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDND+CPLTIKNTILQSCYLRNTEWACGVAVY
Sbjct: 181 KIKGVIECPYPDKDIRRFDANMRLFPPFIDNDICPLTIKNTILQSCYLRNTEWACGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK--- 297
TGNETK+GM RGIPEPKLTA+DAMIDKLTGAIF+FQIVVV+VLG AGNVWKDTEA+K
Sbjct: 241 TGNETKMGMCRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVLVLGIAGNVWKDTEAKKLWY 300
Query: 298 -----EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 352
E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD++MID ET P
Sbjct: 301 VLYPHEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDLETSIP 360
Query: 353 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 412
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI G FYGNE GDALKDV LLNA+
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGNFYGNENGDALKDVELLNAV 420
Query: 413 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 472
+SGS DV+RFLTVMA+CNTVIP +SK G ILYKAQSQDE+ALVHAAA+LHMV NK+ +I
Sbjct: 421 SSGSSDVVRFLTVMAICNTVIPTQSKTGDILYKAQSQDEDALVHAAARLHMVYFNKSGNI 480
Query: 473 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 532
LE+KFN S+LQYE+LETLEFTSDRKRMSVV+KDC +G I LLSKGADEAILPYAHAG+QT
Sbjct: 481 LEVKFNTSILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYAHAGKQT 540
Query: 533 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 592
R F+EAVEQY+ LGLRTLCLAWRE++ DEY+EWSLMFKEASSTL+DREWR+AEVCQR+EH
Sbjct: 541 RHFIEAVEQYAHLGLRTLCLAWRELKRDEYREWSLMFKEASSTLVDREWRVAEVCQRVEH 600
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 652
DL++LGVTAIEDRLQDGVPETI+TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLEILGVTAIEDRLQDGVPETIKTLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 653 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 712
LL IDGKTE+EVCRSLERVL TMRITTSEPKDVAFVVDGWALEIAL HYRKAFTELA+LS
Sbjct: 661 LLLIDGKTEEEVCRSLERVLRTMRITTSEPKDVAFVVDGWALEIALTHYRKAFTELAVLS 720
Query: 713 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 772
RTAICCRVTPSQKAQLV++LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 773 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 832
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI FSFISG+SGTSLFN
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQILFSFISGVSGTSLFN 840
Query: 833 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 892
SVSLMAYNVFYTS+PVLVS +DKDLSE TVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSVPVLVSVLDKDLSEKTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 893 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 952
HAIV FVISIH YAY+KSEMEEVSMVALSGCIW+QAFVV +ETNSFT+ Q++AIWGNL A
Sbjct: 901 HAIVVFVISIHAYAYDKSEMEEVSMVALSGCIWIQAFVVTMETNSFTILQYMAIWGNLAA 960
Query: 953 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1012
FY+INWIFSA+PSSGMYTIMFRLC QPSYWI +FL+VAAGMGPI+A+KYFRYTYR SKIN
Sbjct: 961 FYVINWIFSALPSSGMYTIMFRLCRQPSYWIAIFLMVAAGMGPILAIKYFRYTYRPSKIN 1020
Query: 1013 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1071
LQQAER+GGPILSLGTIEPQ R++EKDV+ LSITQP++R+PVYEPLLSDSPN TRRSFG
Sbjct: 1021 ALQQAERLGGPILSLGTIEPQLRSVEKDVSTLSITQPKTRNPVYEPLLSDSPNATRRSFG 1080
Query: 1072 SGTPFDFF-QSPSRLSSIYSRNCKDN 1096
+GTPFDFF S Y+RNCKDN
Sbjct: 1081 AGTPFDFFQSQSRLSLSSYTRNCKDN 1106
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224132912|ref|XP_002327910.1| aminophospholipid ATPase [Populus trichocarpa] gi|222837319|gb|EEE75698.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 2016 bits (5223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 968/1107 (87%), Positives = 1033/1107 (93%), Gaps = 11/1107 (0%)
Query: 1 MKRYIYINDDETS--QDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLW 58
MKR++YINDDE+S DLYC NR+SNRKYTL+NFLPKNL EQFSRFMNQYFLLIACLQLW
Sbjct: 1 MKRFVYINDDESSPTHDLYCDNRISNRKYTLLNFLPKNLMEQFSRFMNQYFLLIACLQLW 60
Query: 59 SLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQD 118
SLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEK+VW+V++GIKK IQ+QD
Sbjct: 61 SLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKQVWIVRKGIKKHIQAQD 120
Query: 119 IRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFEL 178
I VGN+VWLRENDEVPCDLVLIGTSDPQG+CY+ETAALDGE DLKTR+ P+ACMG+DFEL
Sbjct: 121 ICVGNLVWLRENDEVPCDLVLIGTSDPQGLCYIETAALDGEIDLKTRVTPSACMGIDFEL 180
Query: 179 LHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238
LHKIKGVIECP PDKDIRR D NLRL PPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA
Sbjct: 181 LHKIKGVIECPNPDKDIRRLDANLRLFPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 240
Query: 239 VYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK- 297
VYTGNETKLGM+RGIPEPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARK
Sbjct: 241 VYTGNETKLGMSRGIPEPKLTALDAMIDKLTGAIFVFQIVVVMVLGIAGNVWKDTEARKL 300
Query: 298 -------EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETD 350
E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD EMID ET+
Sbjct: 301 WYVLYPDEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDREMIDLETE 360
Query: 351 TPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLN 410
TPSHATNTAISEDL QVEYILTDKTGTLTEN+M+FR CCI G FYGNE GDA KD LLN
Sbjct: 361 TPSHATNTAISEDLGQVEYILTDKTGTLTENKMVFRICCISGNFYGNEAGDASKDKQLLN 420
Query: 411 AITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNA 470
AI+SGSPDV+RFLTVMA+CNTVIP +SK GAILYKAQSQDE+ALVHAAA+L+MVLV KN
Sbjct: 421 AISSGSPDVVRFLTVMAICNTVIPVQSKTGAILYKAQSQDEDALVHAAAKLNMVLVCKNG 480
Query: 471 SILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ 530
+ILE++FN S +QYE+LETLEFTSDRKRMSVVV+DC +G I LLSKGADEAILPYA GQ
Sbjct: 481 NILELRFNTSAIQYEVLETLEFTSDRKRMSVVVRDCQNGKILLLSKGADEAILPYASPGQ 540
Query: 531 QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRL 590
QTR F EAVEQYSQLGLRTLCLAWRE++EDEY+EWS MF+EASSTL+DREWRIAEVCQRL
Sbjct: 541 QTRIFNEAVEQYSQLGLRTLCLAWRELKEDEYEEWSFMFREASSTLVDREWRIAEVCQRL 600
Query: 591 EHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPK 650
E DL+VLGVTAIEDRLQDGVPETI TLRKAGI+FWMLTGDKQNTAIQIALSCNFISPEPK
Sbjct: 601 ERDLEVLGVTAIEDRLQDGVPETIYTLRKAGIHFWMLTGDKQNTAIQIALSCNFISPEPK 660
Query: 651 GQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 710
GQLL IDGKTE+EV RSLERVLLTMR T SEPKDVAFVVDGWALEIALKHY KAFTELAI
Sbjct: 661 GQLLLIDGKTEEEVGRSLERVLLTMRTTASEPKDVAFVVDGWALEIALKHYWKAFTELAI 720
Query: 711 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 770
LSRTAICCRVTPSQKAQLV++LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAA
Sbjct: 721 LSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAA 780
Query: 771 RAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSL 830
RAADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSL
Sbjct: 781 RAADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSL 840
Query: 831 FNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRS 890
FNSVSLMAYNVFYTSIPVLVS +DKDLSE TVMQHPQILFYCQAGRLLNPSTFAGWFGRS
Sbjct: 841 FNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRS 900
Query: 891 LFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNL 950
LFHAIV FVISIH YA+EKSEMEEV MVALSGCIWLQAFVV LETNSFT+ QHLAIWGNL
Sbjct: 901 LFHAIVVFVISIHAYAFEKSEMEEVGMVALSGCIWLQAFVVTLETNSFTILQHLAIWGNL 960
Query: 951 VAFYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASK 1010
+AFY+INWI SAIPSSGMYTIMFRLC QPSYW+T+ LIVAAGMGPI+A+KYFRYTYR SK
Sbjct: 961 IAFYVINWIVSAIPSSGMYTIMFRLCRQPSYWLTILLIVAAGMGPILAIKYFRYTYRPSK 1020
Query: 1011 INILQQAERMGGPILSLGTIE-PQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPNTRRS 1069
IN LQQAER+GGPILSLG IE PQ R IEK+VAPLSITQ ++R+PVYEPLLSDSP+TRRS
Sbjct: 1021 INTLQQAERLGGPILSLGNIEPPQQRLIEKEVAPLSITQSKNRNPVYEPLLSDSPSTRRS 1080
Query: 1070 FGSGTPFDFFQSPSRLSSIYSRNCKDN 1096
FG GTPFDFFQS SRLSS Y+RNCKDN
Sbjct: 1081 FGPGTPFDFFQSQSRLSSNYTRNCKDN 1107
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446426|ref|XP_002276115.1| PREDICTED: phospholipid-transporting ATPase 2-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2014 bits (5219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 981/1105 (88%), Positives = 1043/1105 (94%), Gaps = 9/1105 (0%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YINDDE SQ+LYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYINDDELSQELYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVV+QGIKK IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVRQGIKKHIQAQDIC 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLREN+EVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR+IP+ACMG+DFELLH
Sbjct: 121 VGNVVWLRENEEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRVIPSACMGIDFELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD NLRL PPFIDND CPLTIKNTILQSCYLRNTEW CGVAVY
Sbjct: 181 KMKGVIECPIPDKDIRRFDANLRLFPPFIDNDFCPLTIKNTILQSCYLRNTEWVCGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEF- 299
TGNETKLGM+RGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLG AGNVWKDTEA K++
Sbjct: 241 TGNETKLGMSRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGIAGNVWKDTEAVKQWY 300
Query: 300 -------PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 352
PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD +MID ET TP
Sbjct: 301 VLYPKKGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDNQMIDQETSTP 360
Query: 353 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 412
SHATNTAISEDL QVEYILTDKTGTLTEN MIFRRCCIGGIFYGNE+GDALKDV LLNA+
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENIMIFRRCCIGGIFYGNESGDALKDVELLNAV 420
Query: 413 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 472
+SGSPDVI+FLTVMA+CNTVIP KSK GAI YKAQSQDE+ALV AAA+LHMV VNKNA+
Sbjct: 421 SSGSPDVIQFLTVMALCNTVIPVKSKTGAISYKAQSQDEDALVQAAARLHMVFVNKNANT 480
Query: 473 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 532
LEI FN S++QYE+L+TLEFTSDRKRMSVVVKDC +G I LLSKGADEAI+PYA AGQQT
Sbjct: 481 LEINFNASIIQYEVLDTLEFTSDRKRMSVVVKDCQNGKIFLLSKGADEAIIPYACAGQQT 540
Query: 533 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 592
RTF EAVEQYSQLGLRTLCLAWRE++EDEY++WSLMFKEA+STL+DREWR+AEVCQRLEH
Sbjct: 541 RTFTEAVEQYSQLGLRTLCLAWRELKEDEYRDWSLMFKEANSTLVDREWRLAEVCQRLEH 600
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 652
DL++LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 653 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 712
LL I+GKTEDEV RSL+RVLLTMRITTSEPKDVAFV+DGWALEIALKHYRKAFT+LAILS
Sbjct: 661 LLLINGKTEDEVGRSLDRVLLTMRITTSEPKDVAFVIDGWALEIALKHYRKAFTDLAILS 720
Query: 713 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 772
RTA+CCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTALCCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 773 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 832
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 840
Query: 833 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 892
SVSLMAYNVFYTSIPVLVS +DKDLSE TVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSIPVLVSVLDKDLSEKTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 893 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 952
HAIV FVISIH YAYEKSEMEEVSMVALSGCIWLQAFVV +ETNSFTV QHLAIWGNL A
Sbjct: 901 HAIVVFVISIHAYAYEKSEMEEVSMVALSGCIWLQAFVVTIETNSFTVLQHLAIWGNLAA 960
Query: 953 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1012
FYIINWI SA+P+SG+YTIMFRLC QPSYWITMFLIV GMGP++A+KYFRYTYR SKIN
Sbjct: 961 FYIINWILSAVPASGLYTIMFRLCKQPSYWITMFLIVVTGMGPVLAIKYFRYTYRPSKIN 1020
Query: 1013 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1071
LQQAER+GGPILSLG IEPQPR+IEKDV+PLSIT P++R+PVYEPLLSDSPN TR+SFG
Sbjct: 1021 TLQQAERLGGPILSLGNIEPQPRSIEKDVSPLSITLPKNRNPVYEPLLSDSPNSTRKSFG 1080
Query: 1072 SGTPFDFFQSPSRLSSIYSRNCKDN 1096
S T FDFF S SRLSS YSRNCKDN
Sbjct: 1081 SATTFDFFPSQSRLSSSYSRNCKDN 1105
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302143322|emb|CBI21883.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1999 bits (5180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 981/1135 (86%), Positives = 1043/1135 (91%), Gaps = 39/1135 (3%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YINDDE SQ+LYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYINDDELSQELYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVV+QGIKK IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVRQGIKKHIQAQDIC 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLREN+EVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR+IP+ACMG+DFELLH
Sbjct: 121 VGNVVWLRENEEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRVIPSACMGIDFELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD NLRL PPFIDND CPLTIKNTILQSCYLRNTEW CGVAVY
Sbjct: 181 KMKGVIECPIPDKDIRRFDANLRLFPPFIDNDFCPLTIKNTILQSCYLRNTEWVCGVAVY 240
Query: 241 TG------------------------------NETKLGMTRGIPEPKLTAVDAMIDKLTG 270
TG NETKLGM+RGIPEPKLTAVDAMIDKLTG
Sbjct: 241 TGKDTRALLNNGRVLFGGSFQVFLLKAFDCLRNETKLGMSRGIPEPKLTAVDAMIDKLTG 300
Query: 271 AIFVFQIVVVIVLGTAGNVWKDTEARKEF--------PWYELLVIPLRFELLCSIMIPIS 322
AIFVFQIVVVIVLG AGNVWKDTEA K++ PWYELLVIPLRFELLCSIMIPIS
Sbjct: 301 AIFVFQIVVVIVLGIAGNVWKDTEAVKQWYVLYPKKGPWYELLVIPLRFELLCSIMIPIS 360
Query: 323 IKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENR 382
IKVSLDLVKSLYAKFIDWD +MID ET TPSHATNTAISEDL QVEYILTDKTGTLTEN
Sbjct: 361 IKVSLDLVKSLYAKFIDWDNQMIDQETSTPSHATNTAISEDLGQVEYILTDKTGTLTENI 420
Query: 383 MIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAI 442
MIFRRCCIGGIFYGNE+GDALKDV LLNA++SGSPDVI+FLTVMA+CNTVIP KSK GAI
Sbjct: 421 MIFRRCCIGGIFYGNESGDALKDVELLNAVSSGSPDVIQFLTVMALCNTVIPVKSKTGAI 480
Query: 443 LYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVV 502
YKAQSQDE+ALV AAA+LHMV VNKNA+ LEI FN S++QYE+L+TLEFTSDRKRMSVV
Sbjct: 481 SYKAQSQDEDALVQAAARLHMVFVNKNANTLEINFNASIIQYEVLDTLEFTSDRKRMSVV 540
Query: 503 VKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEY 562
VKDC +G I LLSKGADEAI+PYA AGQQTRTF EAVEQYSQLGLRTLCLAWRE++EDEY
Sbjct: 541 VKDCQNGKIFLLSKGADEAIIPYACAGQQTRTFTEAVEQYSQLGLRTLCLAWRELKEDEY 600
Query: 563 QEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGI 622
++WSLMFKEA+STL+DREWR+AEVCQRLEHDL++LGVTAIEDRLQDGVPETIETLRKAGI
Sbjct: 601 RDWSLMFKEANSTLVDREWRLAEVCQRLEHDLEILGVTAIEDRLQDGVPETIETLRKAGI 660
Query: 623 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 682
NFWMLTGDKQNTAIQIALSCNFISPEPKGQLL I+GKTEDEV RSL+RVLLTMRITTSEP
Sbjct: 661 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLLINGKTEDEVGRSLDRVLLTMRITTSEP 720
Query: 683 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAI 742
KDVAFV+DGWALEIALKHYRKAFT+LAILSRTA+CCRVTPSQKAQLVE+LKSCDYRTLAI
Sbjct: 721 KDVAFVIDGWALEIALKHYRKAFTDLAILSRTALCCRVTPSQKAQLVEILKSCDYRTLAI 780
Query: 743 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS 802
GDGGNDVRMIQ+ADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS
Sbjct: 781 GDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS 840
Query: 803 QYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTV 862
QYSFYKSLLICFIQIFFSFISG+SGTSLFNSVSLMAYNVFYTSIPVLVS +DKDLSE TV
Sbjct: 841 QYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEKTV 900
Query: 863 MQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSG 922
MQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIV FVISIH YAYEKSEMEEVSMVALSG
Sbjct: 901 MQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVVFVISIHAYAYEKSEMEEVSMVALSG 960
Query: 923 CIWLQAFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCSQPSYW 982
CIWLQAFVV +ETNSFTV QHLAIWGNL AFYIINWI SA+P+SG+YTIMFRLC QPSYW
Sbjct: 961 CIWLQAFVVTIETNSFTVLQHLAIWGNLAAFYIINWILSAVPASGLYTIMFRLCKQPSYW 1020
Query: 983 ITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAERMGGPILSLGTIEPQPRAIEKDVA 1042
ITMFLIV GMGP++A+KYFRYTYR SKIN LQQAER+GGPILSLG IEPQPR+IEKDV+
Sbjct: 1021 ITMFLIVVTGMGPVLAIKYFRYTYRPSKINTLQQAERLGGPILSLGNIEPQPRSIEKDVS 1080
Query: 1043 PLSITQPRSRSPVYEPLLSDSPN-TRRSFGSGTPFDFFQSPSRLSSIYSRNCKDN 1096
PLSIT P++R+PVYEPLLSDSPN TR+SFGS T FDFF S SRLSS YSRNCKDN
Sbjct: 1081 PLSITLPKNRNPVYEPLLSDSPNSTRKSFGSATTFDFFPSQSRLSSSYSRNCKDN 1135
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334188194|ref|NP_001190471.1| phospholipid-translocating ATPase [Arabidopsis thaliana] gi|12229647|sp|P98205.1|ALA2_ARATH RecName: Full=Phospholipid-transporting ATPase 2; Short=AtALA2; AltName: Full=Aminophospholipid ATPase 2; AltName: Full=Aminophospholipid flippase 2 gi|332007696|gb|AED95079.1| phospholipid-translocating ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1995 bits (5169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 961/1107 (86%), Positives = 1032/1107 (93%), Gaps = 11/1107 (0%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKR++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 1 MKRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 61 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 181 KMKGVIECPVPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK--- 297
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARK
Sbjct: 241 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVLVLGIAGNVWKDTEARKQWY 300
Query: 298 -----EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 352
E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 301 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 360
Query: 353 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 412
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 361 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 420
Query: 413 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 472
TSGS DVIRFLTVMA+CNTV+P +SKAG I+YKAQSQDE+ALV AA++LHMV V KNA++
Sbjct: 421 TSGSTDVIRFLTVMAICNTVLPVQSKAGDIVYKAQSQDEDALVIAASKLHMVFVGKNANL 480
Query: 473 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 532
LEI+FNGSV++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEIRFNGSVIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYARAGQQT 540
Query: 533 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 592
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 541 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 600
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 652
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 653 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 712
LL IDGKTE++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+RK F ELAILS
Sbjct: 661 LLMIDGKTEEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHRKDFVELAILS 720
Query: 713 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 772
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 773 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 832
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 781 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 840
Query: 833 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 892
SVSLMAYNVFYTS+PVLVS IDKDLSE +VMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSVPVLVSVIDKDLSEASVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 893 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 952
HAI+ FVI+IH YAYEKSEMEE+ MVALSGCIWLQAFVVA ETNSFTV QHL+IWGNLV
Sbjct: 901 HAIIVFVITIHAYAYEKSEMEELGMVALSGCIWLQAFVVAQETNSFTVLQHLSIWGNLVG 960
Query: 953 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1012
FY IN++FSAIPSSGMYTIMFRLCSQPSYWITMFLIV AGMGPI ALKYFRYTYR SKIN
Sbjct: 961 FYAINFLFSAIPSSGMYTIMFRLCSQPSYWITMFLIVGAGMGPIFALKYFRYTYRPSKIN 1020
Query: 1013 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1071
ILQQAERMGGPIL+LG IE QPR IEKD++P+SITQP++RSPVYEPLLSDSPN TRRSFG
Sbjct: 1021 ILQQAERMGGPILTLGNIETQPRTIEKDLSPISITQPKNRSPVYEPLLSDSPNATRRSFG 1080
Query: 1072 SGTPFDFFQSPSRLSSI--YSRNCKDN 1096
GTPF+FFQS SRLSS Y+RNCKDN
Sbjct: 1081 PGTPFEFFQSQSRLSSSSGYTRNCKDN 1107
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334188192|ref|NP_568633.2| phospholipid-translocating ATPase [Arabidopsis thaliana] gi|332007695|gb|AED95078.1| phospholipid-translocating ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1990 bits (5155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 959/1107 (86%), Positives = 1031/1107 (93%), Gaps = 11/1107 (0%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
+ R++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 33 LDRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 92
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 93 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 152
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 153 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 212
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 213 KMKGVIECPVPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 272
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK--- 297
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARK
Sbjct: 273 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVLVLGIAGNVWKDTEARKQWY 332
Query: 298 -----EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 352
E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 333 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 392
Query: 353 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 412
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 393 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 452
Query: 413 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 472
TSGS DVIRFLTVMA+CNTV+P +SKAG I+YKAQSQDE+ALV AA++LHMV V KNA++
Sbjct: 453 TSGSTDVIRFLTVMAICNTVLPVQSKAGDIVYKAQSQDEDALVIAASKLHMVFVGKNANL 512
Query: 473 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 532
LEI+FNGSV++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 513 LEIRFNGSVIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYARAGQQT 572
Query: 533 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 592
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 573 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 632
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 652
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 633 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 692
Query: 653 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 712
LL IDGKTE++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+RK F ELAILS
Sbjct: 693 LLMIDGKTEEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHRKDFVELAILS 752
Query: 713 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 772
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 753 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 812
Query: 773 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 832
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 813 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 872
Query: 833 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 892
SVSLMAYNVFYTS+PVLVS IDKDLSE +VMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 873 SVSLMAYNVFYTSVPVLVSVIDKDLSEASVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 932
Query: 893 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 952
HAI+ FVI+IH YAYEKSEMEE+ MVALSGCIWLQAFVVA ETNSFTV QHL+IWGNLV
Sbjct: 933 HAIIVFVITIHAYAYEKSEMEELGMVALSGCIWLQAFVVAQETNSFTVLQHLSIWGNLVG 992
Query: 953 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1012
FY IN++FSAIPSSGMYTIMFRLCSQPSYWITMFLIV AGMGPI ALKYFRYTYR SKIN
Sbjct: 993 FYAINFLFSAIPSSGMYTIMFRLCSQPSYWITMFLIVGAGMGPIFALKYFRYTYRPSKIN 1052
Query: 1013 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1071
ILQQAERMGGPIL+LG IE QPR IEKD++P+SITQP++RSPVYEPLLSDSPN TRRSFG
Sbjct: 1053 ILQQAERMGGPILTLGNIETQPRTIEKDLSPISITQPKNRSPVYEPLLSDSPNATRRSFG 1112
Query: 1072 SGTPFDFFQSPSRLSSI--YSRNCKDN 1096
GTPF+FFQS SRLSS Y+RNCKDN
Sbjct: 1113 PGTPFEFFQSQSRLSSSSGYTRNCKDN 1139
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297794981|ref|XP_002865375.1| hypothetical protein ARALYDRAFT_356659 [Arabidopsis lyrata subsp. lyrata] gi|297311210|gb|EFH41634.1| hypothetical protein ARALYDRAFT_356659 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1967 bits (5095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 954/1107 (86%), Positives = 1021/1107 (92%), Gaps = 22/1107 (1%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKR++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 1 MKRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 61 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 181 KMKGVIECPIPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK--- 297
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARK
Sbjct: 241 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVMVLGVAGNVWKDTEARKQWY 300
Query: 298 -----EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 352
E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 301 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 360
Query: 353 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 412
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 361 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 420
Query: 413 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 472
TSGS DVIRFLTVMA+CNTVIP +SKAG I+YKAQSQDE+ALV AAA+LHMV V KNA++
Sbjct: 421 TSGSTDVIRFLTVMAICNTVIPVQSKAGDIVYKAQSQDEDALVIAAAKLHMVFVGKNANL 480
Query: 473 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 532
LEI+FNGS+++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEIRFNGSIIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYACAGQQT 540
Query: 533 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 592
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 541 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 600
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 652
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 653 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 712
LL IDGKT+++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+ K F ELAILS
Sbjct: 661 LLMIDGKTKEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHHKDFVELAILS 720
Query: 713 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 772
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 773 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 832
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF LFN
Sbjct: 781 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF-----------LFN 829
Query: 833 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 892
SVSLMAYNVFYTSIPVLVS IDKDLSE +VMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 830 SVSLMAYNVFYTSIPVLVSVIDKDLSEASVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 889
Query: 893 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 952
HAIV FVI+IH YAYEKSEMEE+ MVALSGCIWLQAFVVA ETNSFTV QHL+IWGNLVA
Sbjct: 890 HAIVVFVITIHAYAYEKSEMEELGMVALSGCIWLQAFVVAQETNSFTVLQHLSIWGNLVA 949
Query: 953 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1012
FY IN++FSAIPSSGMYTIMFRLCSQPSYWITMFLIV AGMGPI ALKYFRYTYR SKIN
Sbjct: 950 FYAINFLFSAIPSSGMYTIMFRLCSQPSYWITMFLIVGAGMGPIFALKYFRYTYRPSKIN 1009
Query: 1013 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1071
ILQQAERMGGPIL+LG IE QPR IEKD++PLSITQP++RSPVYEPLLSDSPN TRRSFG
Sbjct: 1010 ILQQAERMGGPILTLGNIETQPRTIEKDLSPLSITQPKNRSPVYEPLLSDSPNATRRSFG 1069
Query: 1072 SGTPFDFFQSPSRLSSI--YSRNCKDN 1096
GTPF+FFQS SRLSS Y+RNCKDN
Sbjct: 1070 PGTPFEFFQSQSRLSSSSGYTRNCKDN 1096
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449478968|ref|XP_004155467.1| PREDICTED: LOW QUALITY PROTEIN: phospholipid-transporting ATPase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1953 bits (5060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 944/1106 (85%), Positives = 1026/1106 (92%), Gaps = 13/1106 (1%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YIND+E S DLYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYF LIACLQLW L
Sbjct: 1 MKRYVYINDNEPSNDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFXLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQG +K+IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKIIQAQDIH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLRENDEVP DLVLIGTSDPQG+CY+ET+ALDGETDLKTR+IP+ACMG+DF+LL+
Sbjct: 121 VGNLVWLRENDEVPSDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLN 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDNDVCPLTIKNTILQSCYLRNT+W CGVAVY
Sbjct: 181 KIKGVIECPKPDKDIRRFDANIRLFPPFIDNDVCPLTIKNTILQSCYLRNTDWVCGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK--- 297
TGNETKLGM+RG+PEPKLTA+DAMIDKLTGAIFVFQ+VVV+VLG AGNVWKD+EARK
Sbjct: 241 TGNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQLVVVVVLGIAGNVWKDSEARKLWY 300
Query: 298 -----EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 352
E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMID E+ P
Sbjct: 301 VQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDCESGIP 360
Query: 353 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 412
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI GIFYGNE GDALKD L+NAI
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCINGIFYGNENGDALKDKKLVNAI 420
Query: 413 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 472
+ SPDV+RFLT+MA+CNTV+P KSK+G ILYKAQSQDE+ALV+AAA LHMV VNK+A+I
Sbjct: 421 ANSSPDVLRFLTIMAICNTVVPTKSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKSATI 480
Query: 473 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 532
LEI+FNG + +YE+L+TLEFTS+RKRMSVVVKDC +G I L+SKGADEAILPYA+AGQQT
Sbjct: 481 LEIQFNGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIVLMSKGADEAILPYAYAGQQT 540
Query: 533 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 592
RTF+EAV+QY+QLGLRTLCLAWRE+EEDEY+EW+ MFKEA+STL+DREWR+AEVCQRLE
Sbjct: 541 RTFIEAVDQYAQLGLRTLCLAWRELEEDEYREWAFMFKEANSTLVDREWRLAEVCQRLER 600
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 652
+ +VLGVTAIEDRLQDGVPETIETLR+AGINFWMLTGDKQNTAIQIAL CNFISPEPKGQ
Sbjct: 601 NFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCNFISPEPKGQ 660
Query: 653 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 712
LL IDGKTEDEVCRSLERV+LTM+ TTSEPKDVAFVVDGWALEIALK+YR+AFTELAILS
Sbjct: 661 LLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRRAFTELAILS 720
Query: 713 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 772
RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 773 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 832
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI FSFISG+SGTSLFN
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFISGVSGTSLFN 840
Query: 833 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 892
SVSLMAYNVFYTSIPVLVS +DKDLSE TVMQHPQILFYCQAGR+LNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRILNPSTFAGWFGRSLF 900
Query: 893 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 952
HA+V FVISIH YA EKSEM EVSMVALSGCIWLQAFVV LETNSFT+ QHLAIWGNL A
Sbjct: 901 HAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETNSFTILQHLAIWGNLAA 960
Query: 953 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1012
FY+INWIFSAIPSSGMYTIMFRLC QPSYWIT+FLIV GMGP++A+KYFRYTYR SKIN
Sbjct: 961 FYVINWIFSAIPSSGMYTIMFRLCGQPSYWITIFLIVGVGMGPLLAIKYFRYTYRPSKIN 1020
Query: 1013 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1071
LQQAER+GGPILSL IE QPR IEK+V+P+SITQP++R+ VYEPLLSDSP TRRS
Sbjct: 1021 TLQQAERLGGPILSLKNIEHQPRPIEKEVSPISITQPKNRNTVYEPLLSDSPTATRRSLA 1080
Query: 1072 -SGTPFDFFQSPSRLSSIYSRNCKDN 1096
S + FDFFQ+P S YSRN KDN
Sbjct: 1081 SSSSSFDFFQTPP--PSSYSRN-KDN 1103
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449438125|ref|XP_004136840.1| PREDICTED: LOW QUALITY PROTEIN: phospholipid-transporting ATPase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1948 bits (5046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 945/1115 (84%), Positives = 1027/1115 (92%), Gaps = 22/1115 (1%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YIND+E S DLYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYINDNEPSNDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQG +K+IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKIIQAQDIH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLRENDEVP DLVLIGTSDPQG+CY+ET+ALDGETDLKTR+IP+ACMG+DF+LL+
Sbjct: 121 VGNLVWLRENDEVPSDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLN 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDNDVCPLTIKNTILQSCYLRNT+W CGVAVY
Sbjct: 181 KIKGVIECPKPDKDIRRFDANIRLFPPFIDNDVCPLTIKNTILQSCYLRNTDWVCGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK--- 297
TGNETKLGM+RG+PEPKLTA+DAMIDKLTGAIFVFQ+VVV+VLG AGNVWKD+EARK
Sbjct: 241 TGNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQLVVVVVLGIAGNVWKDSEARKLWY 300
Query: 298 -----EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 352
E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMID E+ P
Sbjct: 301 VQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDCESGIP 360
Query: 353 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 412
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI GIFYGNE GDALKD L+NAI
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCINGIFYGNENGDALKDKKLVNAI 420
Query: 413 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 472
+ SPDV+RFLT+MA+CNTV+P KSK+G ILYKAQSQDE+ALV+AAA LHMV VNK+A+I
Sbjct: 421 ANSSPDVLRFLTIMAICNTVVPTKSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKSATI 480
Query: 473 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--- 529
LEI+FNG + +YE+L+TLEFTS+RKRMSVVVKDC +G I L+SKGADEAILPYA+AG
Sbjct: 481 LEIQFNGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIVLMSKGADEAILPYAYAGNRK 540
Query: 530 ------QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRI 583
QQTRTF+EAV+QY+QLGLRTLCLAWRE+EEDEY+EW+ MFKEA+STL+DREWR+
Sbjct: 541 IXILYFQQTRTFIEAVDQYAQLGLRTLCLAWRELEEDEYREWAFMFKEANSTLVDREWRL 600
Query: 584 AEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN 643
AEVCQRLE + +VLGVTAIEDRLQDGVPETIETLR+AGINFWMLTGDKQNTAIQIAL CN
Sbjct: 601 AEVCQRLERNFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCN 660
Query: 644 FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRK 703
FISPEPKGQLL IDGKTEDEVCRSLERV+LTM+ TTSEPKDVAFVVDGWALEIALK+YR+
Sbjct: 661 FISPEPKGQLLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRR 720
Query: 704 AFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 763
AFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISG
Sbjct: 721 AFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISG 780
Query: 764 REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFIS 823
REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI FSFIS
Sbjct: 781 REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFIS 840
Query: 824 GLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTF 883
G+SGTSLFNSVSLMAYNVFYTSIPVLVS +DKDLSE TVMQHPQILFYCQAGR+LNPSTF
Sbjct: 841 GVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRILNPSTF 900
Query: 884 AGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQH 943
AGWFGRSLFHA+V FVISIH YA EKSEM EVSMVALSGCIWLQAFVV LETNSFT+ QH
Sbjct: 901 AGWFGRSLFHAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETNSFTILQH 960
Query: 944 LAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFR 1003
LAIWGNL AFY+INWIFSAIPSSGMYTIMFRLC QPSYWIT+FLIV GMGP++A+KYFR
Sbjct: 961 LAIWGNLAAFYVINWIFSAIPSSGMYTIMFRLCGQPSYWITIFLIVGVGMGPLLAIKYFR 1020
Query: 1004 YTYRASKINILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDS 1063
YTYR SKIN LQQAER+GGPILSL IE QPR IEK+V+P+SITQP++R+ VYEPLLSDS
Sbjct: 1021 YTYRPSKINTLQQAERLGGPILSLKNIEHQPRPIEKEVSPISITQPKNRNTVYEPLLSDS 1080
Query: 1064 PN-TRRSFG-SGTPFDFFQSPSRLSSIYSRNCKDN 1096
P TRRS S + FDFFQ+P S YSRN KDN
Sbjct: 1081 PTATRRSLASSSSSFDFFQTPP--PSSYSRN-KDN 1112
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1096 | ||||||
| DICTYBASE|DDB_G0282959 | 1536 | DDB_G0282959 "transmembrane pr | 0.358 | 0.255 | 0.461 | 2.1e-199 | |
| ZFIN|ZDB-GENE-081031-14 | 1149 | cu137686.1 "cu137686.1" [Danio | 0.635 | 0.605 | 0.355 | 2.4e-168 | |
| DICTYBASE|DDB_G0269380 | 1313 | DDB_G0269380 "P-type ATPase" [ | 0.495 | 0.413 | 0.354 | 7.5e-160 | |
| UNIPROTKB|Q9Y2Q0 | 1164 | ATP8A1 "Probable phospholipid- | 0.561 | 0.528 | 0.356 | 2.7e-156 | |
| POMBASE|SPBC887.12 | 1258 | SPBC887.12 "P-type ATPase (pre | 0.540 | 0.470 | 0.365 | 1.5e-155 | |
| UNIPROTKB|F1PHG9 | 1164 | ATP8A1 "Uncharacterized protei | 0.561 | 0.528 | 0.352 | 8e-155 | |
| FB|FBgn0259221 | 1350 | CG42321 [Drosophila melanogast | 0.885 | 0.718 | 0.365 | 2.4e-154 | |
| ZFIN|ZDB-GENE-100209-2 | 1135 | atp8a2 "ATPase, aminophospholi | 0.496 | 0.479 | 0.366 | 1.3e-152 | |
| MGI|MGI:1354710 | 1148 | Atp8a2 "ATPase, aminophospholi | 0.544 | 0.520 | 0.349 | 2.8e-152 | |
| UNIPROTKB|F1LQH5 | 1166 | Atp11b "Protein Atp11b" [Rattu | 0.523 | 0.492 | 0.357 | 9.3e-152 |
| DICTYBASE|DDB_G0282959 DDB_G0282959 "transmembrane protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 903 (322.9 bits), Expect = 2.1e-199, Sum P(4) = 2.1e-199
Identities = 190/412 (46%), Positives = 262/412 (63%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R IY ND E ++ Y +NR+SN KYT++ F+PKNL EQF R MN YFL+I LQL+ IT
Sbjct: 22 RTIYANDIERNKK-YPSNRISNTKYTIITFIPKNLMEQFGRAMNIYFLMIGILQLFPSIT 80
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
PV+P STWG L FIFA+SA KEA+DDYNR DKKANE+ +++ K+ IQSQ+I VG
Sbjct: 81 PVDPVSTWGALFFIFAISAVKEAFDDYNRSRRDKKANERIYNILRNNEKQQIQSQNILVG 140
Query: 123 NIVWLRENDEVPCDLVLIGTSDP-QGVCYVETAALDGETDLKTRLIPAACMGMDFELLHK 181
+IV+L EN+E+PCDL+++ TSD YV+T+ LDGETDLK + G++ L
Sbjct: 141 DIVYLTENEEIPCDLLVLSTSDKITNSLYVQTSNLDGETDLKIKYSIKETSGLELSQLKS 200
Query: 182 IKGVIECPGPDKDIRRFDGNL-----RLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236
+GV+ECP P+ +I +FD L R + F +D P+ N +LQ+ +L+NT + G
Sbjct: 201 FQGVLECPVPNAEINKFDSRLSMRANRKVNTFSHSDWLPVDSSNLVLQATHLKNTNYIYG 260
Query: 237 VAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXLGTAGNVWKDTEAR 296
+ VYTGNETKLG + K T +D I++ T G G+ + +
Sbjct: 261 LVVYTGNETKLGKNKMDVPTKWTKLDKQINRTTIVIFCIQLTLVLIFGFIGDYIRIIQGH 320
Query: 297 KEFPWY----------ELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMID 346
+ WY + ++IPLRF LL S+MIPIS+KV++D++K YA FI+WD +M +
Sbjct: 321 TQ--WYLDYDDTSLSSKTIIIPLRFLLLNSMMIPISLKVTIDVIKYAYALFINWDLKMYN 378
Query: 347 PETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE 398
+ D P+ A +TA+SEDL Q+EYI TDKTGTLTEN M+F +C I GI Y +
Sbjct: 379 SDIDCPATANSTALSEDLGQIEYIFTDKTGTLTENVMLFSKCSINGIVYNKD 430
|
|
| ZFIN|ZDB-GENE-081031-14 cu137686.1 "cu137686.1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1048 (374.0 bits), Expect = 2.4e-168, Sum P(2) = 2.4e-168
Identities = 262/736 (35%), Positives = 390/736 (52%)
Query: 309 LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVE 368
L F +L + +IPIS+ V+++L K L + FI WD ++ E+D + + ++E+L QVE
Sbjct: 343 LAFLVLYNFIIPISLYVTVELQKFLGSFFIGWDLDLYHEESDQKAQVNTSDLNEELGQVE 402
Query: 369 YILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIR----FLT 424
Y+ TDKTGTLTEN M FR C I G+ Y G + + + P + R FL
Sbjct: 403 YVFTDKTGTLTENEMQFRECSINGVKYQEINGKLVPEGLTEDTPDGSLPCLSREEELFLK 462
Query: 425 VMAVCNTVI-----P---------AKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNA 470
+++C+TV P A + + Y A S DE+ALV A ++ + + +
Sbjct: 463 AVSLCHTVQISYDHPDAAADPFSHANGFSAQMEYYASSPDEKALVEATKRMGVTFMGSHG 522
Query: 471 SILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ 530
I+EIK G +Y++L LEF ++R+RMSV+++ SG L +KGA+ AILPY +G+
Sbjct: 523 EIMEIKKFGKAEKYKLLHVLEFDANRRRMSVILQT-PSGQKVLFTKGAESAILPYTKSGE 581
Query: 531 QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRL 590
+T V V++++ GLRTL +A R DEY++ EA + L RE R+ EV +
Sbjct: 582 IDKTRVH-VDEFALKGLRTLVVACRHFSADEYRDVDRRLHEARTALQQREERLVEVFNFI 640
Query: 591 EHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPK 650
E DL++LG T +ED+LQD V ETIE LR AGI W+LTGDK TA+ ++LSC
Sbjct: 641 ERDLELLGATGVEDKLQDKVQETIEALRLAGIKVWVLTGDKHETAVSVSLSCGHFH-RTM 699
Query: 651 GQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 710
L + K+++E L R L RI VVDG +L +AL+ + K F E+
Sbjct: 700 NILELVQQKSDNECAEQLRR--LARRIKEDHVIQHGLVVDGASLSLALREHEKLFMEVCK 757
Query: 711 LSRTAICCRVTPSQKAQLVELLKSCDYR--TLAIGDGGNDVRMIQKADIGVGISGREGLQ 768
+CCR+ P QKA++V LLK+ + TLAIGDG NDV MIQ+A +G+GI G+EG Q
Sbjct: 758 NCSAVLCCRMAPLQKAKVVRLLKTSPEKPITLAIGDGANDVSMIQEAHVGIGIMGKEGRQ 817
Query: 769 AARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXXXXXXXXX 828
A R +DY+I +F+FL +L+LVHG + Y R A L QY FYK
Sbjct: 818 AVRNSDYAIARFKFLAKLLLVHGHFYYIRIATLVQYFFYKNVCFITPQFLYQFFCLFSQQ 877
Query: 829 XXXNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFY-CQAGRLLNPSTFAGWF 887
+SV L YN+ +TS+P+LV ++ + L V+Q L+ LL+ TF W
Sbjct: 878 TLYDSVYLTLYNICFTSLPILVYSLFEQLVHPHVLQSKPALYRDISKNSLLSFKTFLYWT 937
Query: 888 GRSLFHAIVAFVISIHVYAYEKSEMEEVSMVA--LSGCIWLQAFVV------ALETNSFT 939
HA V F S + + + M M G + V+ ALET+ +T
Sbjct: 938 VLGFCHAFVFFFGSYILMGEDTTLMGNGQMFGNWTFGTLVFTVMVITVTLKLALETHFWT 997
Query: 940 VFQHLAIWGNLVAFYIINWIFSAI--P---SSGMYTIMFRLCSQPSYWITMFLIVAAGMG 994
H WG++ ++I + + I P + MY + +L S S W + +I+ +
Sbjct: 998 WMNHFVTWGSIAFYFIFSLFYGGIIWPFLHTQDMYFVFVQLLSSGSAWFAIIIIIITCLF 1057
Query: 995 PIVALK-YFRYTYRAS 1009
P V K ++R+ + S
Sbjct: 1058 PDVIKKVFYRHLHPTS 1073
|
|
| DICTYBASE|DDB_G0269380 DDB_G0269380 "P-type ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 900 (321.9 bits), Expect = 7.5e-160, Sum P(2) = 7.5e-160
Identities = 200/564 (35%), Positives = 322/564 (57%)
Query: 422 FLTVMAVCNTVIPAKSKA--GAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNG 479
FLT++AVC++V+P + I+Y+A S DE ALV AA L N++ + + G
Sbjct: 617 FLTLLAVCHSVVPDRPNKDDSEIIYEASSPDEAALVSAAKNLGYAFYNRDPTGCLVNIRG 676
Query: 480 SVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV--E 537
+ ++E+L LEF SDRKRMSV+ ++ G I L KGAD +LP Q+ + E
Sbjct: 677 KIERFEVLNVLEFNSDRKRMSVICRN-PQGRIILYCKGADTTVLPLLRKDQEELYSITLE 735
Query: 538 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVL 597
++ ++ GLRTLCLA+ +EE++YQ+W+ ++KEA+ ++ DR+ ++ +V + +E +L ++
Sbjct: 736 FLQDFAADGLRTLCLAYTYLEEEDYQQWNELYKEAAISIQDRDMKVDKVSELIERNLSLI 795
Query: 598 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSID 657
G TAIED+LQ+GVP+ I L KA I W+LTGDKQ TAI I SC+ ++ + + ++ ++
Sbjct: 796 GSTAIEDKLQEGVPQAIANLIKANIKIWVLTGDKQETAINIGFSCHLLTSDMR--IIILN 853
Query: 658 GKTEDEVCRSLERVL---LTMRITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAILSR 713
G +++V ++ + + + A VV+G L AL+ + F ELA +
Sbjct: 854 GSNQEDVHNQIQGAIDAYFSDDAENHQNSGFALVVEGSCLNFALEGELKSVFLELAANCK 913
Query: 714 TAICCRVTPSQKAQLVELLK-SCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 772
+ ICCR TP QKAQ+V++++ + TLAIGDG NDV MIQ A IG+GISG EG+QA A
Sbjct: 914 SVICCRTTPLQKAQVVKMVRDTLRAVTLAIGDGANDVSMIQAAHIGIGISGHEGMQAVMA 973
Query: 773 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXXXXXXXXXXXXN 832
+DYSI +F FL RL++VHGR+ Y R + L Y FYK +
Sbjct: 974 SDYSIAQFSFLYRLLVVHGRWDYKRNSKLMLYCFYKNMVFAMTQFWFGIYNSFSAQTMFD 1033
Query: 833 SVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSL 891
S S+ +NV +T +P++V I D+D+S + ++PQ+ Q N W +
Sbjct: 1034 SWSISIFNVVFTGLPIIVCAIFDQDVSAESSQKYPQLYASGQKDSEFNLRVLWVWIVEAW 1093
Query: 892 FHAIVAFVISIHVYAYEKSEMEE---VSMVALSGCIWLQA-----FVVALETNSFTVFQH 943
H++V F +Y++ + +E + + A+ I++ F +A ET +T H
Sbjct: 1094 IHSVVIFFGVYGLYSHGSTLLESGDTLDLWAMGQNIFILVVITVNFKLAFETRYWTWITH 1153
Query: 944 LAIWGNLVAFYIINWIFSAIPSSG 967
+IW +++ ++ + +AIP G
Sbjct: 1154 FSIWASILIWFAWVAVLAAIPGIG 1177
|
|
| UNIPROTKB|Q9Y2Q0 ATP8A1 "Probable phospholipid-transporting ATPase IA" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 908 (324.7 bits), Expect = 2.7e-156, Sum P(2) = 2.7e-156
Identities = 230/646 (35%), Positives = 351/646 (54%)
Query: 395 YGNETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDE 451
+G+E D LL + + P + FLT+MAVC+T +P + + I+Y+A S DE
Sbjct: 452 FGDEK--TFSDSSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDE 508
Query: 452 EALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNI 511
ALV AA QL+ V + + I G +YE+L LEFTS RKRMSV+V+ SG +
Sbjct: 509 GALVRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRT-PSGKL 567
Query: 512 SLLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFK 570
L KGAD I A + ++ +EQ++ GLRTLC A E+ E ++QEW +++
Sbjct: 568 RLYCKGADTVIYDRLAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYQ 627
Query: 571 EASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 630
AS+++ +R ++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGD
Sbjct: 628 RASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGD 687
Query: 631 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVD 690
KQ TAI I SC + G ++ +G D +L R T+ + D A ++D
Sbjct: 688 KQETAINIGHSCKLLKKN-MGMIVINEGSL-DGTRETLSRHCTTLGDALRKENDFALIID 745
Query: 691 GWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGND 748
G L+ AL R+ F +LA+ + ICCRV+P QK+++VE++K TLAIGDG ND
Sbjct: 746 GKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVVTLAIGDGAND 805
Query: 749 VRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYK 808
V MIQ A +GVGISG EGLQAA ++DYSI +F++LK L+++HG ++YNR + Y FYK
Sbjct: 806 VSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMIHGAWNYNRVSKCILYCFYK 865
Query: 809 XXXXXXXXXXXXXXXXXXXXXXXNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQ 867
+ YNV +T++P L I ++ + ++++P+
Sbjct: 866 NIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPE 925
Query: 868 ILFYCQAGRLLNPSTFAGWFG--RSLFHAIVAFVISIHVYAYEKSEME-EVSMVALSGCI 924
+ Y + L+ +T W LFH+++ F + Y + + S L G
Sbjct: 926 L--YKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGTAFGNGKTSDYLLLGN- 982
Query: 925 WLQAFVV-------ALETNSFTVFQHLAIWGNL---VAFY-IINWIFSAIPSS-GMYTIM 972
++ FVV LET+ +T F H+AIWG++ V F+ I + ++ AIP + M
Sbjct: 983 FVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAIPMAPDMSGEA 1042
Query: 973 FRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAE 1018
L S +W+ + I A + V K + T + ++ +Q+ E
Sbjct: 1043 AMLFSSGVFWMGLLFIPVASLLLDVVYKVIKRTAFKTLVDEVQELE 1088
|
|
| POMBASE|SPBC887.12 SPBC887.12 "P-type ATPase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 956 (341.6 bits), Expect = 1.5e-155, Sum P(2) = 1.5e-155
Identities = 228/623 (36%), Positives = 346/623 (55%)
Query: 421 RFLTVMAVCNTVIPAKSKA-GAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNG 479
+FL V+++C+TVIP ++ +I Y+A S DE ALV AA + + + ++ + G
Sbjct: 582 QFLLVLSICHTVIPEYDESTNSIKYQASSPDEGALVKGAASIGYKFLARKPHLVTVSIFG 641
Query: 480 SVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP-YAHAGQQTRTFVEA 538
YE+L EF S RKRMS+V + C G I L KGAD I+ A +T +
Sbjct: 642 KDESYELLHICEFNSTRKRMSIVFR-CPDGKIRLYVKGADTVIMERLASDNPYLQTTIHH 700
Query: 539 VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLG 598
+E Y+ +GLRTLC+A REV EDEYQ WS +F+ A+S+L+DR ++ + + +E DL +LG
Sbjct: 701 LEDYATVGLRTLCIAMREVPEDEYQRWSTVFETAASSLVDRAQKLMDAAEEIEKDLILLG 760
Query: 599 VTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDG 658
TAIEDRLQDGVP+TI TL+ AGI W+LTGD+Q TAI I +SC I E G L+ ++
Sbjct: 761 ATAIEDRLQDGVPDTISTLQTAGIKIWVLTGDRQETAINIGMSCKLID-EDMG-LVIVNE 818
Query: 659 KTEDEVCRSLERVLLTM---RITTSEPKDVAFVVDGWALEIALKH-YRKAFTELAILSRT 714
+T++ S+ L ++ TT + +A V+DG +L AL + F ELA L R
Sbjct: 819 ETKEATAESVMAKLSSIYRNEATTGNVESMALVIDGVSLTYALDFSLERRFFELASLCRA 878
Query: 715 AICCRVTPSQKAQLVELLK-SCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 773
ICCRV+P QKA +V+++K + LAIGDG NDV MIQ A +GVGISG EGLQA R++
Sbjct: 879 VICCRVSPLQKALIVKMVKRNTGEVLLAIGDGANDVPMIQAAHVGVGISGMEGLQAVRSS 938
Query: 774 DYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXXXXXXXXXXXXNS 833
D+SI +F +LK+L+LVHG + Y R + L YSFYK S
Sbjct: 939 DFSISQFCYLKKLLLVHGSWCYQRLSKLILYSFYKNIALYMTQFWYAFCNAFSGQVIFES 998
Query: 834 VSLMAYNVFYTSIP-VLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 892
S+ YNV +T +P V++ D+ +S G + Q+PQ+ Q N F W +
Sbjct: 999 WSISLYNVLFTVLPPVVIGIFDQFVSAGQLFQYPQLYQLGQRSEFFNLKRFWSWITNGFY 1058
Query: 893 HAIVAFVISIHVYAYEKSEMEEVSMVALSG-CIW---LQAFVVA-------LETNSFTVF 941
H+++ F+ SI V+ Y+ + ++ SG +W L A ++A L +N +T +
Sbjct: 1059 HSLLLFLCSIAVFYYDGPNKDGLA----SGHWVWGTTLYAAILATVLGKAALISNHWTQY 1114
Query: 942 QHLAIWGNLVAFYIINWIFS-AIPSSGM----YTIMFRLCSQPSYWITMFLIVAAGMGPI 996
+A G+ + + + I++ A P+ G Y I+ L +W ++ ++ +
Sbjct: 1115 TVIATLGSFLLWIVFMPIYAVAAPAIGFSKEYYGIIPHLYGNLKFWASLLVLPTIALMRD 1174
Query: 997 VALKYFRYTYRASKINILQQAER 1019
KY Y + + +Q+ ++
Sbjct: 1175 FVWKYSSRMYYPEEYHYVQEIQK 1197
|
|
| UNIPROTKB|F1PHG9 ATP8A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 898 (321.2 bits), Expect = 8.0e-155, Sum P(2) = 8.0e-155
Identities = 228/646 (35%), Positives = 348/646 (53%)
Query: 395 YGNETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDE 451
+G+E D LL + + P + FLT+MAVC+T +P + + I+Y+A S DE
Sbjct: 452 FGDEK--TFSDSSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDE 508
Query: 452 EALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNI 511
ALV AA QL+ V + + I G +YE+L LEFTS RKRMSV+V+ SG +
Sbjct: 509 GALVRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRT-PSGKL 567
Query: 512 SLLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFK 570
L KGAD I A + ++ +EQ++ GLRTLC A E+ E ++QEW +++
Sbjct: 568 RLYCKGADTVIYDRLAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYQ 627
Query: 571 EASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 630
AS+++ +R ++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGD
Sbjct: 628 RASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGD 687
Query: 631 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVD 690
KQ TAI I SC + G ++ +G D +L R + + D A ++D
Sbjct: 688 KQETAINIGHSCKLLRKN-MGMIVINEGSL-DATRETLGRHCTILGDALRKENDFALIID 745
Query: 691 GWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGND 748
G L+ AL R+ F +LA+ + ICCRV+P QK+++VE++K TLAIGDG ND
Sbjct: 746 GKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGAND 805
Query: 749 VRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYK 808
V MIQ A +GVGISG EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK
Sbjct: 806 VSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRVSKCILYCFYK 865
Query: 809 XXXXXXXXXXXXXXXXXXXXXXXNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQ 867
+ YNV +T++P L I ++ + ++++P+
Sbjct: 866 NIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPE 925
Query: 868 ILFYCQAGRLLNPSTFAGWFG--RSLFHAIVAFVISIHVYAYEKSEME-EVSMVALSGCI 924
+ Y + L+ +T W LFH+++ F + Y + S L G
Sbjct: 926 L--YKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGNVFGNGKTSDYLLLGN- 982
Query: 925 WLQAFVV-------ALETNSFTVFQHLAIWGNLVAFYIINWIFSAI-PSSGMYTIMF--- 973
++ FVV LET+ +T F H+AIWG++ + + I+S++ P+ M M
Sbjct: 983 FVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAVPMAPDMSGEA 1042
Query: 974 -RLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAE 1018
L S +W+ + I A + V K + T + ++ +Q+ E
Sbjct: 1043 AMLFSSGVFWMGLLFIPVASLLLDVVYKVIKRTAFKTLVDEVQELE 1088
|
|
| FB|FBgn0259221 CG42321 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1505 (534.8 bits), Expect = 2.4e-154, P = 2.4e-154
Identities = 373/1021 (36%), Positives = 566/1021 (55%)
Query: 2 KRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLI 61
+R I +N + ++ Y NR++ KY+ ++FLP L+EQF R+ N +FLLIA LQ +
Sbjct: 216 RRIINLNGPQPTK--YGNNRITTAKYSFISFLPAFLFEQFRRYSNCFFLLIAILQQIPEV 273
Query: 62 TPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRV 121
+P +T PL+FI +VSA KE +D R+ +D + N + + + G ++ ++ V
Sbjct: 274 SPTGRYTTLVPLMFILSVSAIKEIIEDIKRHRADNEINHRSIERLDSGSWCTVRWSELTV 333
Query: 122 GNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR-LIPAACMGMDFELLH 180
G+I+ + N P DL+L+ +S+PQ +C++ETA LDGET+LK R +PA ++ + L
Sbjct: 334 GDIIKVGINTFFPADLILLSSSEPQAMCFIETANLDGETNLKIRQALPATAELLETKDLQ 393
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNT-ILQ-SCYLRNTEWACGVA 238
+++G IEC P++ + F+G LR + P + N +LQ LRNT W G+
Sbjct: 394 RLEGRIECELPNRHLYEFNGVLR------ETGKPPAALGNDQVLQRGAILRNTAWVFGIV 447
Query: 239 VYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXL----GTAGNVWKDTE 294
VY+G ETKL M P + +DKLT L G W T
Sbjct: 448 VYSGQETKL-MKNSTSAPLKRST---VDKLTNTQILMLFMILISLCIISGLCNLFW--TR 501
Query: 295 ARKEFPWY---------ELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMI 345
E WY L L F +L + +IPIS++V+L+LV+ L A FI++D EM
Sbjct: 502 EHSETDWYLGLTDFKTKSLGYNLLTFFILYNNLIPISLQVTLELVRFLQAIFINYDIEMY 561
Query: 346 DPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE-TGDALK 404
E++TP+ A + ++E+L V+YI +DKTGTLT+N M F++C I G Y E T + +
Sbjct: 562 HEESNTPAMARTSNLNEELGMVKYIFSDKTGTLTQNVMEFKKCSIAGYVYTAERTPEESQ 621
Query: 405 DVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMV 464
V + S + FL +++VC+TVIP + + G ++Y A S DE ALV A + +
Sbjct: 622 LVQNILGRHETSAVIEEFLELLSVCHTVIPERKENGNMIYHAASPDERALVEGAQKFGYI 681
Query: 465 LVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP 524
+ +EI G +YE+L LEFTS RKRMS++V+ + I L KGAD I
Sbjct: 682 FDTRTPKYVEINALGVRKRYEVLNVLEFTSSRKRMSLIVRTPEN-KIKLFCKGADTVIYE 740
Query: 525 -YAHAGQQTRT-FVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWR 582
A GQ R + +E+++ GLRTLCLA ++ D YQEWS F +AS L +RE +
Sbjct: 741 RLAPQGQAFREQTLRHLEEFASDGLRTLCLAVADIRPDVYQEWSQTFDKASVALQNRESK 800
Query: 583 IAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 642
+ + +E++L++LG TAIEDRLQDGVPETI +L AGI W+LTGDKQ TAI I SC
Sbjct: 801 LEDAANLIENNLRLLGATAIEDRLQDGVPETIASLLDAGIYIWVLTGDKQETAINIGYSC 860
Query: 643 NFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK-HY 701
IS ++ ++ ++ D + R + ++++ +VA V+DG L+ AL
Sbjct: 861 RLISHSM--DIIILNEESLDATREVIHRHYGEFKSSSAKDANVALVIDGTTLKYALSCDL 918
Query: 702 RKAFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQKADIGVG 760
R F +L IL R ICCRV+P QKA++VE++ +S + TLAIGDG NDV MIQKA++G+G
Sbjct: 919 RNDFQDLCILCRVVICCRVSPMQKAEVVEMVTQSTNAVTLAIGDGANDVAMIQKANVGIG 978
Query: 761 ISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXX 820
ISG EGLQAA A+DYSI +FR+L+RL+LVHG ++Y R + L YSFYK
Sbjct: 979 ISGVEGLQAACASDYSIAQFRYLQRLLLVHGAWNYARISKLILYSFYKNVCLYVIELWFA 1038
Query: 821 XXXXXXXXXXXNSVSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLN 879
++ YNV +T++P + +K + T++++P + Q +L N
Sbjct: 1039 VYSGWSGQILFERWTIGLYNVLFTAMPPFAMGLFEKFCTAETMIRYPMLYKTSQNAKLFN 1098
Query: 880 PSTFAGWFGRSLFHAIVAFVISIHVYAYEK--SEMEEVSMVALSGCIWLQAFV-VALE-- 934
F W +L H++ F + + Y E S+ + + + ++ V V L+
Sbjct: 1099 VKVFWIWIFNALLHSVFLFWLPLAAYTKEVIWSDGKTSDYLLMGNLVYTYVIVTVCLKAG 1158
Query: 935 --TNSFTVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFR-----LCSQPSYWITMFL 987
TNS+T HLAIWG++V ++ I+S + + FR L S P ++ + L
Sbjct: 1159 LITNSWTWLTHLAIWGSIVLWFGFLLIYSHVWPMFKFASNFRGMDIQLLSTPVFYFCLML 1218
Query: 988 I 988
+
Sbjct: 1219 V 1219
|
|
| ZFIN|ZDB-GENE-100209-2 atp8a2 "ATPase, aminophospholipid transporter-like, class I, type 8A, member 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 889 (318.0 bits), Expect = 1.3e-152, Sum P(2) = 1.3e-152
Identities = 205/559 (36%), Positives = 306/559 (54%)
Query: 416 SPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEI 475
SP + FLT+MAVC+TV+P + I+Y+A S DE ALV A L V + + I
Sbjct: 474 SPQICEFLTMMAVCHTVVPERED-NQIIYQASSPDEGALVKGAKSLGFVFTARTPHSVII 532
Query: 476 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 535
+ G YE+L LEF+S+RKRMSV+V+ +GN+ L KGAD I + Q +
Sbjct: 533 EARGKEQTYELLNVLEFSSNRKRMSVIVRT-PTGNLRLYCKGADNVIFERLNVTSQYKEL 591
Query: 536 VEA-VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL 594
A +EQ++ GLRTLC A+ ++EE Y EW + S+ L DR ++ E + +E +L
Sbjct: 592 TVAHLEQFATEGLRTLCFAYVDLEEGAYLEWLKEYNRISTVLKDRAQKLEECYELIEKNL 651
Query: 595 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL 654
+LG TAIEDRLQ GVPETI TL +A I W+LTGDKQ TAI I SC +S L+
Sbjct: 652 LLLGATAIEDRLQAGVPETIATLMRADIKIWVLTGDKQETAINIGYSCRLVSHGMS--LI 709
Query: 655 SIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAILSR 713
++ + D +L ++ + + ++A ++DG L+ AL R+AF +LA+ +
Sbjct: 710 IVNEDSLDATRATLTAHCSSLGDSLRKENELALIIDGQTLKYALSFEVRQAFLDLALSCK 769
Query: 714 TAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 772
ICCRV+P QK+++V+++K TLAIGDG NDV MIQ A +GVGISG EG+QA +
Sbjct: 770 AVICCRVSPLQKSEIVDMVKKHVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNS 829
Query: 773 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXXXXXXXXXXXXN 832
+DYSI +F +L++L+LVHG +SYNR Y FYK
Sbjct: 830 SDYSIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFE 889
Query: 833 SVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSL 891
+ YNV +T++P I D+ S+ +++ PQ+ Q N F G +L
Sbjct: 890 RWCIGLYNVIFTALPPFTLGIFDRPCSQQNMIRFPQLYRITQNAEGFNTKVFWGHCINAL 949
Query: 892 FHAIVAFVISIHVYAYEK--SEMEEVSMVALSGCIWLQAFVVA-----LETNSFTVFQHL 944
H+I+ F + ++ V + + ++ V +ET ++T F HL
Sbjct: 950 IHSIILFWFPLKALEHDTPFDNGNSVDYLFVGNIVYTYVVVTVCLKAGMETTAWTRFSHL 1009
Query: 945 AIWGNLVAFYIINWIFSAI 963
A+WG++V + + ++SAI
Sbjct: 1010 AVWGSMVLWMLFFAVYSAI 1028
|
|
| MGI|MGI:1354710 Atp8a2 "ATPase, aminophospholipid transporter-like, class I, type 8A, member 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 893 (319.4 bits), Expect = 2.8e-152, Sum P(2) = 2.8e-152
Identities = 217/621 (34%), Positives = 335/621 (53%)
Query: 416 SPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEI 475
+P + FLT++AVC+TV+P K I+Y+A S DE ALV A +L V + + I
Sbjct: 454 APCIQEFLTLLAVCHTVVPEKD-GDEIIYQASSPDEAALVKGAKKLGFVFTGRTPYSVII 512
Query: 476 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 535
+ G + IL LEF+SDRKRMSV+V+ SG + L KGAD I + + ++
Sbjct: 513 EAMGQEQTFGILNVLEFSSDRKRMSVIVR-LPSGQLRLYCKGADNVI--FERLSKDSKYM 569
Query: 536 VEAV---EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 592
E + E ++ GLRTLC+A+ ++ E+EY+EW +++EAS L DR R+ E + +E
Sbjct: 570 EETLCHLEYFATEGLRTLCVAYADLSENEYEEWLKVYQEASIILKDRAQRLEECYEIIEK 629
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 652
+L +LG TAIEDRLQ GVPETI TL KA I W+LTGDKQ TAI I SC +S
Sbjct: 630 NLLLLGATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQNMALI 689
Query: 653 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAIL 711
LL D D ++ + + + DVA ++DG L+ AL R++F +LA+
Sbjct: 690 LLKEDSL--DATRAAITQHCTDLGNLLGKENDVALIIDGHTLKYALSFEVRRSFLDLALS 747
Query: 712 SRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 770
+ ICCRV+P QK+++V+++K TLAIGDG NDV MIQ A +GVGISG EG+QA
Sbjct: 748 CKAVICCRVSPLQKSEIVDVVKKRVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQAT 807
Query: 771 RAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXXXXXXXXXXX 830
+DY+I +F +L++L+LVHG +SYNR Y FYK
Sbjct: 808 NNSDYAIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQIL 867
Query: 831 XNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGR 889
+ YNV +T++P I ++ ++ ++++ PQ+ Q N F G
Sbjct: 868 FERWCIGLYNVIFTALPPFTLGIFERSCTQESMLRFPQLYRITQNAEGFNTKVFWGHCIN 927
Query: 890 SLFHAIVAFVISIHVYAYEK--SEMEEVSMVALSGCIWLQAFVVA-----LETNSFTVFQ 942
+L H+++ F + + ++ + + + ++ V LET ++T F
Sbjct: 928 ALVHSLILFWVPMKALEHDTPVTSGHATDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFS 987
Query: 943 HLAIWGN----LVAFYIINWIFSAIP-SSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIV 997
HLA+WG+ LV F + + I+ IP + M + S +W+ +FL+ A + V
Sbjct: 988 HLAVWGSMLIWLVFFGVYSTIWPTIPIAPDMKGQATMVLSSAYFWLGLFLVPTACLIEDV 1047
Query: 998 ALKYFRYTYRASKINILQQAE 1018
A + ++T + + + +Q+ E
Sbjct: 1048 AWRAAKHTCKKTLLEEVQELE 1068
|
|
| UNIPROTKB|F1LQH5 Atp11b "Protein Atp11b" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 897 (320.8 bits), Expect = 9.3e-152, Sum P(2) = 9.3e-152
Identities = 213/595 (35%), Positives = 319/595 (53%)
Query: 444 YKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVV 503
Y A S DE+ALV AAA+ ++ + + +E+K G V +Y++L LEF SDR+RMSV+V
Sbjct: 514 YYASSPDEKALVEAAARAGIIFIGISEETMEVKVLGRVERYKLLHILEFDSDRRRMSVIV 573
Query: 504 KDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQ 563
+ SG L +KGA+ +ILP G+ +T + V++++ GLRTLC+A+R+ +EY+
Sbjct: 574 Q-APSGEKLLFAKGAESSILPKCIGGEIAKTRIH-VDEFALKGLRTLCIAYRQFTAEEYE 631
Query: 564 EWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGIN 623
+ + EA ++L +E ++A V Q +E DL +LG TA+EDRLQD V ETIE LR AGI
Sbjct: 632 DVNRRLFEARTSLQRQEEKLAGVFQYIEKDLVLLGATAVEDRLQDKVRETIEALRMAGIK 691
Query: 624 FWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683
W+LTGDK TA+ ++LSC +L + + D C R L RIT
Sbjct: 692 VWVLTGDKHETAVSVSLSCGHFHRTMN--ILELINQKSDSGCVEQLRQL-ARRITEDHVI 748
Query: 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYR--TLA 741
VVDG +L +AL+ + K F E+ +CCR+ P QKA+++ L+K + TLA
Sbjct: 749 QHGLVVDGTSLSLALREHEKLFMEVCRNCSAVLCCRMAPLQKAKVIRLIKISPEKPITLA 808
Query: 742 IGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFL 801
+GDG NDV MIQ+A +G+GI G+EG QAAR +DY++ +F+FL +L+ VHG + Y R A L
Sbjct: 809 VGDGANDVSMIQEAHVGIGIMGKEGRQAARNSDYAVARFKFLSKLLFVHGHFYYIRIATL 868
Query: 802 SQYSFYKXXXXXXXXXXXXXXXXXXXXXXXNSVSLMAYNVFYTSIPVLV-STIDKDLSEG 860
QY FYK +SV L YN+ +TS+PVL+ S +++ +
Sbjct: 869 VQYFFYKNVCFITPQFLYQFYCLFSQQTLYDSVYLTLYNICFTSLPVLIYSLLEQHIDPH 928
Query: 861 TVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVA- 919
+ P + Y RLL+ F W HA + F S + + S + M
Sbjct: 929 VLQSKPTLYRYISKNRLLSMKAFLYWTVLGFSHAFIFFFGSYFLIGKDTSLLGNGQMFGN 988
Query: 920 -LSGCIWLQAFVV------ALETNSFTVFQHLAIWGNLVAFYIINWIFSAI--P---SSG 967
G + V+ ALET+ +T HL WG+++ ++I + + I P S
Sbjct: 989 WTFGTLVFTVMVITVTVKMALETHFWTWINHLVTWGSIIFYFIFSLFYGGILWPFLGSQN 1048
Query: 968 MYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAERMGG 1022
MY++ +L S S W + L+V + + V K F + Q AE G
Sbjct: 1049 MYSVFIQLLSSGSAWFAILLMVVSCLFVDVVKKVFDRQLHPTSTQKAQLAEAPSG 1103
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P98205 | ALA2_ARATH | 3, ., 6, ., 3, ., 1 | 0.8681 | 1.0 | 0.9900 | yes | no |
| Q9Y2Q0 | AT8A1_HUMAN | 3, ., 6, ., 3, ., 1 | 0.3598 | 0.9133 | 0.8599 | yes | no |
| P70704 | AT8A1_MOUSE | 3, ., 6, ., 3, ., 1 | 0.3659 | 0.9133 | 0.8711 | yes | no |
| Q29449 | AT8A1_BOVIN | 3, ., 6, ., 3, ., 1 | 0.3656 | 0.9124 | 0.8703 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1096 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-135 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 8e-74 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 9e-34 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 5e-27 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-24 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 2e-18 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 1e-13 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-12 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 9e-12 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 2e-11 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 1e-10 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 4e-10 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 9e-10 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 5e-08 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 4e-07 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 4e-06 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 5e-06 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 5e-05 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 5e-05 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 9e-05 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 2e-04 | |
| PRK13582 | 205 | PRK13582, thrH, phosphoserine phosphatase; Provisi | 2e-04 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 2e-04 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 8e-04 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 0.001 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 0.002 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 0.002 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 0.004 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 0.004 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 894 bits (2313), Expect = 0.0
Identities = 400/1066 (37%), Positives = 594/1066 (55%), Gaps = 75/1066 (7%)
Query: 17 YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFI 76
+C+N++S KYT++ FLPKNL+EQF RF N YFL++A LQ +++P ++ PL F+
Sbjct: 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60
Query: 77 FAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIK-KLIQSQDIRVGNIVWLRENDEVPC 135
V+A KEA +D R DK+ N + V++ + I +D+RVG+IV +++++ +P
Sbjct: 61 LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120
Query: 136 DLVLIGTSDPQGVCYVETAALDGETDLKTR--LIPAACMGMDFELLHKIKGVIECPGPDK 193
DL+L+ +S+P GVCYVETA LDGET+LK R L M +D + + G IEC P+
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM-LDEDDIKNFSGEIECEQPNA 179
Query: 194 DIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGI 253
+ F GN+ + PL+ N +L+ C LRNT+W GV VYTG++TKL
Sbjct: 180 SLYSFQGNMT----INGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQ 235
Query: 254 PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIP----- 308
K + ++ ++ L +F V+ ++ +W D + + + L V
Sbjct: 236 APSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLW-YIRLDVSERNAAA 294
Query: 309 ------LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISE 362
L F +L S +IPIS+ VSL+LVKS+ A FI+ D +M +TDTP+ + ++E
Sbjct: 295 NGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNE 354
Query: 363 DLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG---NETGDAL-KDVGLLN-------- 410
+L QVEYI +DKTGTLT+N M F++C I G+ YG E D + + +G
Sbjct: 355 ELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENSMLV 414
Query: 411 ---AITSGSPDVIR--------------FLTVMAVCNTVIP--AKSKAGAILYKAQSQDE 451
T P ++ F +A+C+TV+P I Y+A S DE
Sbjct: 415 ESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDE 474
Query: 452 EALVHAAAQLHMVLVNK--NASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSG 509
ALV AA + V + + L I+ +G +YEIL LEF SDRKRMSV+V+ G
Sbjct: 475 AALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVR-NPDG 533
Query: 510 NISLLSKGADEAILPY--AHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSL 567
I LL KGAD I + Q E +E Y+ GLRTLC+A+RE+ E+EY+EW+
Sbjct: 534 RIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNE 593
Query: 568 MFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWML 627
+ EAS+ L DRE ++ V + +E DL +LG TAIED+LQ+GVPETIE LR+AGI W+L
Sbjct: 594 EYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVL 653
Query: 628 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE------ 681
TGDK TAI I SC +S + + I + D + + T+ E
Sbjct: 654 TGDKVETAINIGYSCRLLSRNME--QIVITSDSLDATRSVEAAIKFGLEGTSEEFNNLGD 711
Query: 682 PKDVAFVVDGWALEIALKHY-RKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRT 739
+VA V+DG +L AL K F +LA+ + ICCRV+PSQKA +V L+K S T
Sbjct: 712 SGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTT 771
Query: 740 LAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTA 799
LAIGDG NDV MIQ+AD+GVGISG+EG+QA A+D++IG+FRFL +L+LVHGR+SY R +
Sbjct: 772 LAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRIS 831
Query: 800 FLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLV-STIDKDLS 858
+ Y FYK+L+ IQ ++SF +G SG +L+ ++ YNVF+T++PV+ D+D+S
Sbjct: 832 KMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVS 891
Query: 859 EGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEME-EVSM 917
+++PQ+ Q G+ + TF GW ++ ++V F + Y V
Sbjct: 892 ASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSVDD 951
Query: 918 VALSGCIWLQAFVV------ALETNSFTVFQHLAIWGNLVAFYIINWIFSAI-PSSGMYT 970
+ G I A VV ALE N + + IWG+++ + I ++S+I PS Y
Sbjct: 952 FSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFPSPAFYK 1011
Query: 971 IMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQ 1016
R+ +W+ + +IV + P K + +R +I+Q+
Sbjct: 1012 AAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 608 bits (1570), Expect = 0.0
Identities = 376/1134 (33%), Positives = 585/1134 (51%), Gaps = 110/1134 (9%)
Query: 3 RYIYINDDETSQDLY--CANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACL-QLWS 59
R +Y+ND E S + + N + KY++ +FLP+NL+EQF R YFL+IA L QL
Sbjct: 71 RLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQ 130
Query: 60 LITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDI 119
L AS PL F+ V+A K+A++D+ R+ SD+ N + WV+ + + +DI
Sbjct: 131 LAVFGRGASIL-PLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDI 189
Query: 120 RVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELL 179
RVG I+ ++ ND +PCD+VL+ TSDP GV YV+T LDGE++LKTR + E
Sbjct: 190 RVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEK- 248
Query: 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239
KI G+I+C P+++I F N+ +D L N IL+ C L+NT WA GVAV
Sbjct: 249 EKINGLIKCEKPNRNIYGFQANME-----VDGKRLSLGPSNIILRGCELKNTAWAIGVAV 303
Query: 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVW--------- 290
Y G ETK + K + ++ ++ + +F I + ++ VW
Sbjct: 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELD 363
Query: 291 -------KD--TEARKEFPWY----ELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKF 337
KD K + +Y E+ L ++ IMIPIS+ +S++LV+ A F
Sbjct: 364 TIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYF 423
Query: 338 IDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN 397
+ D +M D +++ I+EDL Q++Y+ +DKTGTLTEN+M F+ I G+ Y +
Sbjct: 424 MIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSD 483
Query: 398 ET---------------GDALK-------DVGLLNAITSGS-----PDVIRFLTVMAVCN 430
G L+ D LL SG V F +A CN
Sbjct: 484 GRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACN 543
Query: 431 TVIP------AKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQY 484
T++P + + Y+ +S DE+ALV+AAA +L+ + + + I +G ++
Sbjct: 544 TIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRF 603
Query: 485 EILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT---RTFVEAVEQ 541
+L EF SDRKRMSV++ C + + KGAD ++ R +
Sbjct: 604 NVLGLHEFDSDRKRMSVIL-GCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHT 662
Query: 542 YSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTA 601
YS LGLRTL + RE+ + E+++W F+ AS+ LI R + +V +E++L +LG +A
Sbjct: 663 YSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASA 722
Query: 602 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE 661
IED+LQ GVPE IE+LR AGI W+LTGDKQ TAI I S ++ K + I+ ++
Sbjct: 723 IEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTN--KMTQIIINSNSK 780
Query: 662 DEVCRSLERVLLTMR--ITTSEPKD------------VAFVVDGWALEIAL-KHYRKAFT 706
+ +SLE L+ + T S VA ++DG +L L +
Sbjct: 781 ESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLF 840
Query: 707 ELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISGRE 765
+LA +CCRV P QKA +V L+K+ TLAIGDG NDV MIQ AD+GVGISG+E
Sbjct: 841 QLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQE 900
Query: 766 GLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGL 825
G QA A+D+++G+FRFL L+LVHG ++Y R ++ Y+FY++ + + ++ +
Sbjct: 901 GRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCF 960
Query: 826 SGTSLFNSVSLMAYNVFYTSIP-VLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFA 884
+ T+ N S + Y+V YT++P ++V +DKDLS T++++PQ+ Q N F
Sbjct: 961 TLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFW 1020
Query: 885 GWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVV------ALETNSF 938
+L+ + V F + + +AY S ++ S+ G +W A V+ A++ +
Sbjct: 1021 LTMIDTLWQSAVVFFVPL--FAYWASTIDGSSI----GDLWTLAVVILVNLHLAMDIIRW 1074
Query: 939 TVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVA 998
H AIWG++VA +I + AIP+ Y +F + S+W+ + IV A + P
Sbjct: 1075 NWITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRFV 1134
Query: 999 LKYFRYTYRASKINILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSR 1052
+K + + I ++AE+ G E QP +E + I +P R
Sbjct: 1135 VKVLYQYFTPCDVQIAREAEKFGTF------RESQPVEVEMN----PILEPPRR 1178
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 430 bits (1109), Expect = e-135
Identities = 233/1019 (22%), Positives = 382/1019 (37%), Gaps = 183/1019 (17%)
Query: 7 INDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQ--LWSLITPV 64
++++E + L + + L K L QF L+ A L + +
Sbjct: 45 LSEEEVKRRLKKYGPNELPEEKKRSLLKKFL-RQFKDPFIILLLVAALLSAFVGDWVDAG 103
Query: 65 NPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNI 124
A ++ I A+ + + + KK + + V++ G I + ++ G+I
Sbjct: 104 VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDI 163
Query: 125 VWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKG 184
V L D VP DL L+ +SD V+ +AL GE+ + D L
Sbjct: 164 VLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK-QALPLTKSDAPL------ 212
Query: 185 VIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNE 244
G D+D N + + + A G+ V TG E
Sbjct: 213 -----GLDRD-------------------------NMLFSGTTVVSGR-AKGIVVATGFE 241
Query: 245 TKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPW 301
T+ G + T + ++KL + V +V+ ++ G R
Sbjct: 242 TEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF------RGGNGL 295
Query: 302 YELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAIS 361
E L L +P + + + +L A+ + D ++ +
Sbjct: 296 LESF---LTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIV----------RSLNAI 342
Query: 362 EDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIR 421
E L V+ I +DKTGTLT+N+M ++ Y N G + D L SP ++R
Sbjct: 343 ETLGSVDVICSDKTGTLTQNKMTVKKI------YINGGGKDIDDKDLK-----DSPALLR 391
Query: 422 FLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSV 481
FL A+CN+V P K+ Y+A E ALV A +L L + S LE++
Sbjct: 392 FLLAAALCNSVTPEKNGW----YQAGDPTEGALVEFAEKLGFSL---DLSGLEVE----- 439
Query: 482 LQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQ 541
Y IL + F S+RKRMSV+VK G L KGA E IL + +E
Sbjct: 440 --YPILAEIPFDSERKRMSVIVKT-DEGKYILFVKGAPEVILERC-------KSIGELEP 489
Query: 542 YSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTA 601
++ GLRTL A +E+ + + ++ +K+ D E +E DL LG+T
Sbjct: 490 LTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDE------IESDLVFLGLTG 543
Query: 602 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE 661
IED ++ V E IE LR+AGI WM+TGD TAI IA C
Sbjct: 544 IEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECG------------------ 585
Query: 662 DEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELA-ILSRTAICCRV 720
I + V+DG L+ ELA ++ ++ RV
Sbjct: 586 ---------------IEAEAESAL--VIDGAELDALSDE------ELAELVEELSVFARV 622
Query: 721 TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAAD--YSIG 778
+P QKA++VE L+ + GDG ND ++ AD+G+ + G EG AA+ A +
Sbjct: 623 SPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAM-GGEGTDAAKEAADIVLLD 681
Query: 779 KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSG--TSLFNSVSL 836
L +V GR Y Y K+ ++ I L + L
Sbjct: 682 DNFATIVLAVVEGRRVYVNIKKFILYLLSKN----VGEVLTLLIYSLFNLFFLPLTPLQL 737
Query: 837 MAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIV 896
+ N+ S+P L ++ E VM+ P L N F + + +
Sbjct: 738 LWINLLTDSLPALALGVED--PESDVMKRPPRGP---EEGLFNRKIFWRFILIIGLLSAI 792
Query: 897 AFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVAFYII 956
F+++ +Y ++ + L F L+T +FTV + + L
Sbjct: 793 LFILTFLLYLL----------GFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRG 842
Query: 957 NWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQ 1015
S L S W+ + +I+ + I ++ + +++ +
Sbjct: 843 RPFLS-----------SLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFE 890
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 254 bits (651), Expect = 8e-74
Identities = 135/590 (22%), Positives = 215/590 (36%), Gaps = 155/590 (26%)
Query: 72 PLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLREND 131
L+F+ V K +D R LSD+ N + V++ G K+ I ++D+ G++V ++ +
Sbjct: 6 VLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWKE-IPAKDLVPGDVVLVKSGE 64
Query: 132 EVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGP 191
VP D VL+ G C+V+ + L GE++ + L G I
Sbjct: 65 TVPADGVLL-----SGSCFVDESNLTGESNPVLK----------TALKETQSGTITGDLV 109
Query: 192 DKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR 251
F G L + +T + T V V TG ET R
Sbjct: 110 FAGTYVFGGTLIV----------VVTPTGIL-------TTVGRIAVVVKTGFET-----R 147
Query: 252 GIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRF 311
+ K ++ I + + + V + W ++ L LR
Sbjct: 148 TPLQSKRDRLENFI--FILFLLLLALAVFLY--LFIRGWDPN------SIFKAL---LRA 194
Query: 312 ELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYIL 371
++ I++P ++ ++ + ++ + N E+L +V+Y+
Sbjct: 195 LIVLVIVVPPALPAAVTVALAVGDA------RLAK----KGILVRNLNALEELGKVDYLC 244
Query: 372 TDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNT 431
+DKTGTLT+N+M + I G N V N SG P
Sbjct: 245 SDKTGTLTKNKMTLQGVYIDGGKEDNS----SSLVACDNNYLSGDP-------------- 286
Query: 432 VIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLE 491
E+AL+ +A + K + +Y+IL+
Sbjct: 287 ------------------MEKALLKSAELV-------------GKADKGNKEYKILDVFP 315
Query: 492 FTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLC 551
F+S KRMSV+V+ G+ L KGA E IL + + E + ++ GLR L
Sbjct: 316 FSSVLKRMSVIVET-PDGSDLLFVKGAPEFILERCN------NYEEKYLELARQGLRVLA 368
Query: 552 LAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVP 611
A +E LE DL+ LG+ ED L+
Sbjct: 369 FASKE---------------------------------LEDDLEFLGLITFEDPLRPDAK 395
Query: 612 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI-----SPEPKGQLLSI 656
ETIE L+ AGI M+TGD TA IA SPE K Q++
Sbjct: 396 ETIEELKAAGIKVVMITGDNVLTAKAIAKELGIDVFARVSPEQKLQIVEA 445
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 9e-34
Identities = 164/769 (21%), Positives = 268/769 (34%), Gaps = 156/769 (20%)
Query: 48 YFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRY-----LSDKKANEKE 102
Y + + LW L + + I +S+T + Y L D +
Sbjct: 177 YVFQVFSVILWLL------DEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQS 230
Query: 103 VWVVKQGIKKLIQSQDIRVGNIVWLRENDE--VPCDLVLIGTSDPQGVCYVETAALDGET 160
V V++ G I S ++ G+IV + +E +PCD VL+ G C V + L GE+
Sbjct: 231 VIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLL-----SGSCIVNESMLTGES 285
Query: 161 DLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKN 220
+P +K I G D + F+ +
Sbjct: 286 ------VPV------------LKFPIPDNGDDDED-----------LFLYETSKKHVLFG 316
Query: 221 --TILQSCYLRNTEWACGVAVYTGNET-KLGMTRGIPEPKLTAV----DAMIDKLTGAIF 273
ILQ + V TG T K + R I PK D+ L A+
Sbjct: 317 GTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVL 376
Query: 274 -VFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIP--------ISIK 324
+ + I+ L I LR + +I++P I I
Sbjct: 377 ALIGFIYTIIELIKDGR-------------PLGKIILRSLDIITIVVPPALPAELSIGIN 423
Query: 325 VSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMI 384
SL +K P N A +++ DKTGTLTE+ +
Sbjct: 424 NSLARLKKKGIF-------CTSPFR------INFA-----GKIDVCCFDKTGTLTEDGLD 465
Query: 385 FRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSK-AGAIL 443
R + G+ E + + L +A C+++ + K G L
Sbjct: 466 LR--GVQGLSGNQEFLKIVTEDSSLK--------PSITHKALATCHSLTKLEGKLVGDPL 515
Query: 444 YKAQSQD-----EEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKR 498
K + EE +A+ +L + + I+ +F+S +R
Sbjct: 516 DKKMFEATGWTLEED--DESAEPTSILAVV------RTDDPPQ-ELSIIRRFQFSSALQR 566
Query: 499 MSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVE 558
MSV+V + KGA E I + E ++ Y++ G R L LA++E+
Sbjct: 567 MSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELP 626
Query: 559 EDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLR 618
+ Q+ + ++A +E +L LG E+ L+ E I+ L+
Sbjct: 627 KLTLQKAQDLSRDA-----------------VESNLTFLGFIVFENPLKPDTKEVIKELK 669
Query: 619 KAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERV----LLT 674
+A I M+TGD TA+ +A C ++P +L+ E ++ +
Sbjct: 670 RASIRTVMITGDNPLTAVHVARECGIVNPSNT-LILAEAEPPESGKPNQIKFEVIDSIPF 728
Query: 675 MRITTSEP-------------KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT 721
P + G A + H + L LS T + R+
Sbjct: 729 ASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRL--LSHTTVFARMA 786
Query: 722 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 770
P QK LVELL+ DY GDG ND +++AD+G+ +S E AA
Sbjct: 787 PDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAEASVAA 835
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 5e-27
Identities = 169/800 (21%), Positives = 287/800 (35%), Gaps = 194/800 (24%)
Query: 73 LIFIFAVSATKEAWDDYNRYLS----DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLR 128
L+ + V A +DY + L +++ + +++ V++ G ++ I DI VG+IV L
Sbjct: 136 LVSVILV-VLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLS 194
Query: 129 ENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIEC 188
D VP D V I ++ +++ GE+D K
Sbjct: 195 TGDVVPADGVFISGLS----LEIDESSITGESDPI----------------KK------- 227
Query: 189 PGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLG 248
GP +D P + T++ R A GV + G KL
Sbjct: 228 -GPVQD--------------------PFLLSGTVVNEGSGRMLVTAVGVNSFGG---KLM 263
Query: 249 MTRGIPEPKLTAVDAMIDKLTGAIFVF----QIVVVIVLGTAGNVWKDTEARKEFPWYEL 304
M T + + +L G I F +++ +VL ++
Sbjct: 264 MELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQ 323
Query: 305 LVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDL 364
L ++ ++ +++ L L A I Y M D + + A E +
Sbjct: 324 TF--LDHFIIAVTIVVVAVPEGLPL-----AVTIALAYSMKKMMKDN-NLVRHLAACETM 375
Query: 365 AQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLT 424
I +DKTGTLT+N M + IG + +L + +++ +
Sbjct: 376 GSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVR--------DVLRNVPKHVRNIL--VE 425
Query: 425 VMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQY 484
+++ ++ + G + S+ E AL L L+ +
Sbjct: 426 GISLNSSSEEVVDRGGKRAFIG-SKTECAL------LDFGLLLLRD--YQEVRAEE---- 472
Query: 485 EILETLEFTSDRKRMSVVVKDCHSGN-ISLLSKGADEAILP----YAHAGQQTRTFVEA- 538
++++ F S+RK MSVVVK HSG KGA E +L + + +
Sbjct: 473 KVVKIYPFNSERKFMSVVVK--HSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDD 530
Query: 539 -------VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLE 591
+E + LRT+CLA+R+ +E+
Sbjct: 531 KDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYP----------------------N 568
Query: 592 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKG 651
L ++GV I+D L+ GV E ++ ++AGI M+TGD +TA IA +C ++
Sbjct: 569 KGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF---- 624
Query: 652 QLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL--- 708
G A+E K F L
Sbjct: 625 --------------------------------------GGLAME------GKEFRSLVYE 640
Query: 709 ---AILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG--VGISG 763
IL + + R +P K LV +LK GDG ND ++ AD+G +GISG
Sbjct: 641 EMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISG 700
Query: 764 REGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSF 821
E A A+D + F + R + GR Y+ Q+ L + + + +F
Sbjct: 701 TE--VAKEASDIILLDDNFASIVRAV-KWGRNVYDNIRKFLQF----QLTVNVVAVILTF 753
Query: 822 ISG-LSGTSLFNSVSLMAYN 840
+ +S TS +V L+ N
Sbjct: 754 VGSCISSTSPLTAVQLLWVN 773
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 2e-24
Identities = 124/490 (25%), Positives = 172/490 (35%), Gaps = 114/490 (23%)
Query: 355 ATNTAISEDLAQVE------YILTDKTGTLTENRMIFRRC-------------CIGGIFY 395
A AI L VE I +DKTGTLT N+M + C+ G Y
Sbjct: 271 AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTY 330
Query: 396 GNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 455
G +KD G + + T+ A+CN ++ + K E AL
Sbjct: 331 -APEGGVIKDDGPVAG--GQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAAL- 386
Query: 456 HAAAQLHMVLVNK---NASILEIKFNG-------SVLQ--YEILETLEFTSDRKRMSVVV 503
VLV K A+ + SV ++ L TLEF+ DRK MSV+
Sbjct: 387 -------KVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLC 439
Query: 504 KDCHSGNISLLSKGADEAILPYAH------------AGQQTRTFVEAVEQYSQL-GLRTL 550
K S L KGA E +L + T + +++ LR L
Sbjct: 440 KP--STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCL 497
Query: 551 CLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGV 610
LA++ D + +E DL +GV + D + V
Sbjct: 498 ALAFK----DIPDPREEDLLSDPANFE-----------AIESDLTFIGVVGMLDPPRPEV 542
Query: 611 PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLER 670
+ IE R AGI M+TGD + TA I SP+ S G+ D
Sbjct: 543 ADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFD-------- 594
Query: 671 VLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVE 730
E+ R A + SR PS K++LVE
Sbjct: 595 ------------------------EMGPAKQRAACRSAVLFSRV------EPSHKSELVE 624
Query: 731 LLKSCDYRTLAIGDGGNDVRMIQKADIGVGI-SGREGLQAARAADYSIGKFRFLKRLILV 789
LL+ GDG ND ++KADIG+ + SG E A A+D + F + V
Sbjct: 625 LLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTE--VAKEASDMVLADDNFATIVAAV 682
Query: 790 H-GRYSYNRT 798
GR YN
Sbjct: 683 EEGRAIYNNM 692
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 90.7 bits (225), Expect = 2e-18
Identities = 101/422 (23%), Positives = 158/422 (37%), Gaps = 94/422 (22%)
Query: 362 EDLAQVEYILTDKTGTLTENRMIFRRC-CIGGI------FYGNETGDALKDVGLLNAITS 414
E L V I +DKTGTLT+N M + G+ N+ G+ + D +L+ +
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYT 378
Query: 415 GSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILE 474
V R L +CN +++A +L + AL+ + +
Sbjct: 379 --VAVSRILEAGNLCNNAK-FRNEADTLLGNPT---DVALIELLMKFGL----------- 421
Query: 475 IKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRT 534
+ Y + + F+S+RK M+V + KGA E +L Y
Sbjct: 422 ---DDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYC-------- 470
Query: 535 FVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHD- 593
Y + +TL L + + D QE + AS+ L R+ E
Sbjct: 471 -----TYYQKKDGKTLTLT--QQQRDVIQE--EAAEMASAGL-----RVIAFASGPEKGQ 516
Query: 594 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQL 653
L LG+ I D + GV E + TL G+ M+TGD Q TA+ IA S +
Sbjct: 517 LTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ--- 573
Query: 654 LSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSR 713
S+ G+ D +D L I+ +
Sbjct: 574 -SVSGEKLDA-------------------------MDDQQLS-------------QIVPK 594
Query: 714 TAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-A 772
A+ R +P K ++V+ L+ GDG ND ++ ADIGV + G+ G A+ A
Sbjct: 595 VAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM-GQTGTDVAKEA 653
Query: 773 AD 774
AD
Sbjct: 654 AD 655
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 1e-13
Identities = 93/423 (21%), Positives = 145/423 (34%), Gaps = 139/423 (32%)
Query: 358 TAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 417
TAI E+LA ++ + +DKTGTLT N++ + N G DV L A+ S
Sbjct: 278 TAI-EELAGMDILCSDKTGTLTLNKLSIDEIL----PFFN--GFDKDDVLLYAALASREE 330
Query: 418 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF 477
D QD + ++ + E +
Sbjct: 331 D------------------------------QD---------AIDTAVLGSAKDLKEARD 351
Query: 478 NGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 537
Y++LE + F KR V+D +G ++KGA + IL ++ VE
Sbjct: 352 G-----YKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVE 406
Query: 538 A-VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKV 596
V++ + G R L +A DE W
Sbjct: 407 EKVDELASRGYRALGVA----RTDEEGRWHF----------------------------- 433
Query: 597 LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQ----NTAIQIALSCNFISPEPKGQ 652
LG+ + D + ETIE R G+ M+TGD TA ++ L N + +
Sbjct: 434 LGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTAD---V 490
Query: 653 LLSID--GKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 710
LL D + +E DG+A
Sbjct: 491 LLKGDNRDDLPSGLGEMVED------------------ADGFA----------------- 515
Query: 711 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 770
V P K ++VE+L+ + GDG ND ++KAD+G+ ++G AA
Sbjct: 516 --------EVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAG--ATDAA 565
Query: 771 RAA 773
R+A
Sbjct: 566 RSA 568
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 3e-12
Identities = 158/754 (20%), Positives = 251/754 (33%), Gaps = 179/754 (23%)
Query: 105 VVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKT 164
V++ G I S D+ G+I L+ D +P DL LI T + + A L GE+ L
Sbjct: 122 VIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFD----TDEALLTGES-LPV 176
Query: 165 RLIPAACMGMDFEL----------------LHKIKGVIECPGPDKDIRRFDGNLRLLPPF 208
A G + + + KG+ + +I L+
Sbjct: 177 IKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236
Query: 209 IDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGIP-EPKLTAVDAMIDK 267
K L L+ T+ G LG+ G P KL+ K
Sbjct: 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAF--------LGLNVGTPLHRKLS-------K 281
Query: 268 LTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIPISIKVSL 327
L +F I+ I++ A D E + I L +IP S+ L
Sbjct: 282 LAVILFCIAIIFAIIVMAAHKFDVDKEV-------AIYAICLAIS-----IIPESLIAVL 329
Query: 328 DLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR 387
+ ++ A + +I + D E L V I +DKTGT+T+ +MI R+
Sbjct: 330 SITMAMGAANMS-KRNVIVRKLDA---------LEALGAVNDICSDKTGTITQGKMIARQ 379
Query: 388 CCIGGIFYGNETGDALKD-----VGLLNAITSGSP-----------DV------------ 419
I +G + D D G ++ I SP D+
Sbjct: 380 IWIPR--FGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEID 437
Query: 420 ----------IRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ----LHMVL 465
I+ L A+ N K A +KA E +H A+ H L
Sbjct: 438 LPEDIDMDLFIKLLETAALANIATVFKDDATD-CWKAHGDPTEIAIHVFAKKFDLPHNAL 496
Query: 466 V----------NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLS 515
N +S+ + Q+E + F S+ KRM+ + +D H ++ +
Sbjct: 497 TGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYA 556
Query: 516 KGADEAILP-----YAHAGQQTRTFVEA--------VEQYSQLGLRTLCLAWREVEEDEY 562
KGA E I+ G + + +E + GLR L A + ++
Sbjct: 557 KGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKA-- 614
Query: 563 QEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGI 622
K + E DL+ LG+ I D ++ +E +AGI
Sbjct: 615 DNNDDQLKNETLNR-----------ATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGI 663
Query: 623 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 682
N MLTGD TA IA I P I +
Sbjct: 664 NVHMLTGDFPETAKAIAQEVGIIPPN---------------------------FIHDRDE 696
Query: 683 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAIC---CRVTPSQKAQLVELLKSCDYRT 739
+ V+ G + A ++ + A+C R P K +++E L
Sbjct: 697 IMDSMVMTGSQFD--------ALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFC 748
Query: 740 LAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 773
GDG ND ++ A++G+ + G G A+ A
Sbjct: 749 AMTGDGVNDSPSLKMANVGIAM-GINGSDVAKDA 781
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 9e-12
Identities = 117/451 (25%), Positives = 182/451 (40%), Gaps = 106/451 (23%)
Query: 362 EDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE--TGDALKDVGLLNAITSGSPDV 419
E L I +DKTGTLT+NRM + +++ N+ D +D + + S
Sbjct: 339 ETLGSTSTICSDKTGTLTQNRMT-----VAHMWFDNQIHEADTTEDQSGV-SFDKSSATW 392
Query: 420 IRFLTVMAVCN-TVIPAKSKAGAILYKAQSQD--EEAL---VHAAAQLHMVLVNKNASIL 473
+ + +CN V A + IL +A + D E AL + M + +N ++
Sbjct: 393 LALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVV 452
Query: 474 EIKFNGSVLQYEI-LETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA---- 528
EI FN S +Y++ + E D + + L+ KGA E IL +
Sbjct: 453 EIPFN-STNKYQLSIHENEDPRDPRHL-------------LVMKGAPERILERCSSILIH 498
Query: 529 GQQ-------TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 581
G++ F A + LG R L + ++++ E + + D
Sbjct: 499 GKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTD--- 555
Query: 582 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 641
+L +G+ ++ D + VP+ + R AGI M+TGD TA IA
Sbjct: 556 -----------NLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG 604
Query: 642 CNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE--PKDV-AFVVDGWAL---- 694
IS E ++E + + I S+ P+D A VV G L
Sbjct: 605 VGIIS----------------EGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMT 648
Query: 695 -----EIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAI----GDG 745
EI H TE+ + +RT +P QK +VE C R AI GDG
Sbjct: 649 SEQLDEILKYH-----TEI-VFART------SPQQKLIIVE---GCQ-RQGAIVAVTGDG 692
Query: 746 GNDVRMIQKADIGV--GISGREGLQAARAAD 774
ND ++KADIGV GI+G + + +AAD
Sbjct: 693 VNDSPALKKADIGVAMGIAGSDV--SKQAAD 721
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 2e-11
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 716 ICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 775
+ RV+P QK Q+VE L+ + GDG ND ++KAD+G+ + + AAD
Sbjct: 430 VFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMGAKA------AADI 483
Query: 776 SIGKFRFLK-RLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFIS 823
+ + GR ++ ++ +L++ + + I
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVII 532
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 1e-10
Identities = 70/293 (23%), Positives = 109/293 (37%), Gaps = 82/293 (27%)
Query: 483 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADE---AILPYAHAGQQTRTFVEAV 539
Y ++ L F R+R+SVVV+D G L+ KGA E A+ + G R EA
Sbjct: 438 GYRKVDELPFDFVRRRLSVVVEDAQ-GQHLLICKGAVEEMLAVATHVRDGDTVRPLDEAR 496
Query: 540 --------EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLE 591
E Y+ G R L +A RE+ E ++ A+ E
Sbjct: 497 RERLLALAEAYNADGFRVLLVATREIPGGE---------------SRAQYSTAD-----E 536
Query: 592 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKG 651
DL + G D ++ I LR+ G+ +LTGD I A C + EP
Sbjct: 537 RDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGD---NPIVTAKICREVGLEPGE 593
Query: 652 QLL--SIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELA 709
LL I+ + + R +E
Sbjct: 594 PLLGTEIEAMDDAALAREVE---------------------------------------- 613
Query: 710 ILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 762
+ ++TP QK+++++ L++ + +GDG ND ++ AD VGIS
Sbjct: 614 ---ERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDAD--VGIS 661
|
Length = 903 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 4e-10
Identities = 64/287 (22%), Positives = 112/287 (39%), Gaps = 82/287 (28%)
Query: 490 LEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYA----HAG------QQTRTFVEAV 539
+ F DR+R+SVVV++ + L+ KGA E +L G + ++ ++ +
Sbjct: 412 IPFDFDRRRLSVVVEN-RAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDM 470
Query: 540 -EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLG 598
+ ++ G+R + +A + +L EA T D E L + G
Sbjct: 471 TAEMNRQGIRVIAVATK----------TLKVGEADFTKTD------------EEQLIIEG 508
Query: 599 VTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL--SI 656
D ++ E I L K GIN +LTGD + +I C + + LL I
Sbjct: 509 FLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARI---CQEVGIDANDFLLGADI 565
Query: 657 DGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAI 716
+ +++E+ R L + I
Sbjct: 566 EELSDEELARELR-------------------------------------------KYHI 582
Query: 717 CCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 763
R+TP QK++++ LLK + +GDG ND ++KAD+G+ +
Sbjct: 583 FARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDT 629
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 9e-10
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 483 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPY 525
+Y + + F S+RKRMS V K L KGA E IL
Sbjct: 45 RYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 5e-08
Identities = 43/271 (15%), Positives = 95/271 (35%), Gaps = 74/271 (27%)
Query: 73 LIFIFAVSATKEAWDDYNRYLSDKK----ANEKEVWVVKQGIKKLIQSQDIRVGNIVWLR 128
++ + ++A EA+ +Y + K V++ G ++ I + ++ VG+IV L+
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 129 ENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIEC 188
D VP D +I +G V+ +AL GE+ +
Sbjct: 62 PGDRVPADGRII-----EGSLEVDESALTGESLPVEK----------------------- 93
Query: 189 PGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLG 248
+ +T+ + + E + TG +T+LG
Sbjct: 94 ----------------------------SRGDTVFAGTVVLSGE-LKVIVTATGEDTELG 124
Query: 249 -MTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELL 305
+ R + + T + ++DKL + + + I++ + E L
Sbjct: 125 KIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIWFFRG-------GDFLEAL 177
Query: 306 VIPLRFELLCSIMIPISIKVSLDLVKSLYAK 336
+ +L P ++ +++ L ++ A
Sbjct: 178 LR--ALAVL-VAACPEALPLAVPLALAVGAG 205
|
Length = 222 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 4e-07
Identities = 70/307 (22%), Positives = 123/307 (40%), Gaps = 89/307 (28%)
Query: 484 YEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYA----HAGQQ---TRTFV 536
++ ++ + F +R+RMSVVV + ++ + L+ KGA E IL H G+ +
Sbjct: 441 WQKIDEIPFDFERRRMSVVVAE-NTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIML 499
Query: 537 EAVEQ----YSQLGLRTLCLAWREV--EEDEYQEWSLMFKEASSTLIDREWRIAEVCQRL 590
+++ ++ GLR + +A + + E +YQ D
Sbjct: 500 RRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQ------------RAD------------ 535
Query: 591 EHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPK 650
E DL + G A D ++ ++ L+ +G+ +LTGD + A ++ C+ + +
Sbjct: 536 ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKV---CHEVGLDAG 592
Query: 651 GQLLS--IDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL 708
L+ I+ ++DE+ E
Sbjct: 593 EVLIGSDIETLSDDELANLAE--------------------------------------- 613
Query: 709 AILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 768
RT + R+TP K ++V LLK + +GDG ND ++ ADI GIS +
Sbjct: 614 ----RTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADI--GISVDGAVD 667
Query: 769 AAR-AAD 774
AR AAD
Sbjct: 668 IAREAAD 674
|
Length = 902 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 4e-06
Identities = 59/227 (25%), Positives = 91/227 (40%), Gaps = 62/227 (27%)
Query: 483 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--GQQTRTFVEAVE 540
Q +EFT+ + RMS + D N ++ KGA +AI + A G +AV+
Sbjct: 365 QSLHATFVEFTA-QTRMSGINLD----NGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVD 419
Query: 541 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVT 600
Q ++ G L VC+ D ++ GV
Sbjct: 420 QVARQGGTPLV----------------------------------VCE----DNRIYGVI 441
Query: 601 AIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC---NFIS---PEPK---- 650
++D ++ G+ E LRK GI M+TGD + TA IA +FI+ PE K
Sbjct: 442 YLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAEATPEDKIALI 501
Query: 651 ------GQLLSIDGK-TEDEVCRSLERVLLTMRITTSEPKDVAFVVD 690
G+L+++ G T D + V + M T K+ A +VD
Sbjct: 502 RQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVD 548
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 5e-06
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 595 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 639
K++GV A+ D L+ E I L+ GI MLTGD + TA IA
Sbjct: 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA 571
|
Length = 713 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 5e-05
Identities = 46/232 (19%), Positives = 68/232 (29%), Gaps = 66/232 (28%)
Query: 532 TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQE---WSLMFKEASSTLIDREWRIAEVCQ 588
V E + L +A + + L+ + L E +
Sbjct: 15 GEPVVPEAEALLEA-AAALGVAIVIAAGENLTKEGREELVRRLLLRALAGEELLEELLRA 73
Query: 589 RLE----HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644
DL VLG+ A+ D L G E ++ L++AGI +LTGD + TA IA
Sbjct: 74 GATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIA----- 128
Query: 645 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKA 704
+LL + D D + L K K
Sbjct: 129 -------RLLGLF--------------------------DALVSADLYGLVGVGKPDPKI 155
Query: 705 FTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 756
F +E L L +GDG ND+ + A
Sbjct: 156 F--------------------ELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 5e-05
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 595 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 639
++ GV A+ D+L+ E I+ L++ GI MLTGD + TA +A
Sbjct: 404 ELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVA 448
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 9e-05
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 595 KVLGVTAIEDRLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIA 639
++LGV A+ D+L+ E I L++AG I MLTGD ++ A +A
Sbjct: 374 ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA 419
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 2e-04
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 592 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 639
+ ++LGV ++D ++ G+ E LRK GI M+TGD TA IA
Sbjct: 434 ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 481
|
Length = 681 |
| >gnl|CDD|237437 PRK13582, thrH, phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 722 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 759
P K Q V+ LKS YR +A GD ND M+ +AD G+
Sbjct: 130 PDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGI 167
|
Length = 205 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-04
Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 25/180 (13%)
Query: 608 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRS 667
+ V E IE L++ ++ + T D E + +
Sbjct: 82 EDVKEIIEYLKENNLSILLYTDDG--------AYILNDVSEKIVREERYVKSFVLVIDDF 133
Query: 668 LERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTA-ICCRVTP--SQ 724
+ + + V D L+ K ++ F L ++ + + P
Sbjct: 134 EL-------LEDEDINKILIVTDPEDLDELEKELKELFGSLITITSSGPGYLEIMPKGVS 186
Query: 725 KA----QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI-SGREGLQAARAADYSIGK 779
K L + L +A GDG ND+ M++ A +GV + + ++A AADY G
Sbjct: 187 KGTALKALAKHLGIDLEEVIAFGDGENDIEMLELAGLGVAMGNASPEVKA--AADYVTGS 244
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 8e-04
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 722 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL--QAARAADYSI 777
P KA+++ LK + + +G+G ND+ +++AD+G+ +EG+ + AD +
Sbjct: 79 PEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL 136
|
Length = 152 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 0.001
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 592 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 639
+ VLG+ A++D L+ + I L+ GI MLTGD A IA
Sbjct: 555 RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIA 602
|
Length = 741 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 739 TLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779
T+A+GDG ND+ MI+ A +G+ + + LQ + AD I K
Sbjct: 171 TVAVGDGANDLSMIKAAGLGIAFNAKPKLQ--QKADICINK 209
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 0.002
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIA 639
D LG + D + E I L+ GI MLTGD++ A ++A
Sbjct: 350 DGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVA 397
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 0.002
Identities = 39/154 (25%), Positives = 59/154 (38%), Gaps = 46/154 (29%)
Query: 488 ETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPY--AHAGQQTRTFVEAVEQYSQL 545
+ F++ + RMS V D + KGA +AI Y ++ G AV++ ++
Sbjct: 370 TFVPFSA-QTRMSGVDLDGRE-----IRKGAVDAIRRYVESNGGHFPAELDAAVDEVARK 423
Query: 546 GLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDR 605
G L +A D +VLGV ++D
Sbjct: 424 GGTPLVVA--------------------------------------EDNRVLGVIYLKDI 445
Query: 606 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 639
++ G+ E LRK GI M+TGD TA IA
Sbjct: 446 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 479
|
Length = 679 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.004
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 94 SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVET 153
S K ++ V++ G K I ++ + VG++V ++ D +P DL +I C V+
Sbjct: 134 SFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDN 189
Query: 154 AALDGETDLKTR 165
++L GE++ +TR
Sbjct: 190 SSLTGESEPQTR 201
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 725 KAQLVELLKSCDY---RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 781
L EL T+A GD ND+ M++ A + + ++ + L+A R
Sbjct: 146 AKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRALADVRIWPIDLR 205
Query: 782 FLKRLI 787
+ L+
Sbjct: 206 AVLYLL 211
|
Length = 212 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1096 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.96 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.86 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.51 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.44 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.18 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.16 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.16 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.14 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.09 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.09 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.04 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.0 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.93 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.92 | |
| PLN02887 | 580 | hydrolase family protein | 98.91 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.91 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.83 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.82 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.72 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.64 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.6 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.59 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.55 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.51 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.46 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.42 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.4 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.39 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.38 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.37 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.33 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.31 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.29 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.25 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.22 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.2 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.09 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.06 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.05 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.98 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 97.94 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.9 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.87 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.81 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.8 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.74 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.67 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.63 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.59 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.57 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.55 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.5 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.49 | |
| PLN02423 | 245 | phosphomannomutase | 97.39 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.39 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.33 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.23 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.22 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.21 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.16 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.1 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.94 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.93 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.85 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.83 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.82 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 96.76 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.62 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.6 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.56 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.52 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.46 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 96.41 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.34 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.24 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.15 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.14 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.06 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.06 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.02 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.94 | |
| PLN03017 | 366 | trehalose-phosphatase | 95.87 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.75 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.68 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 95.62 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.48 | |
| PLN02811 | 220 | hydrolase | 95.44 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.4 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.39 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.36 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.32 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.27 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.14 | |
| PLN02940 | 382 | riboflavin kinase | 95.1 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.06 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.04 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 94.94 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.76 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 94.59 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.49 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.44 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 94.34 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 94.04 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 94.04 | |
| PLN02151 | 354 | trehalose-phosphatase | 93.84 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.51 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.48 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.23 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 92.92 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 92.91 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.46 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 92.36 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 92.35 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 92.04 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 91.97 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 91.86 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 91.47 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 91.07 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 90.73 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 89.71 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 89.5 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 88.84 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 88.68 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 88.57 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 87.54 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 87.16 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 86.99 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 86.91 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 86.64 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 86.39 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 85.79 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 85.31 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 83.34 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 82.75 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 82.33 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-182 Score=1647.86 Aligned_cols=1009 Identities=41% Similarity=0.703 Sum_probs=906.4
Q ss_pred ccEEEeCCCc---ccccCCCCceeecCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHH
Q 001341 2 KRYIYINDDE---TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFA 78 (1096)
Q Consensus 2 ~r~~~~n~~~---~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~ 78 (1096)
+|.+|.|++. .+..+|+.|+|+|+|||+++|||++||+||+|++|+|||++++++++| ++|.+++++.+|+++|+.
T Consensus 14 ~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~~~~~~pl~~vl~ 92 (1151)
T KOG0206|consen 14 SRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNPYTTLVPLLFVLG 92 (1151)
T ss_pred ceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCccceeeceeeeeh
Confidence 5999999973 345599999999999999999999999999999999999999999999 889999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHhhcceEEEEEECCe-EEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccC
Q 001341 79 VSATKEAWDDYNRYLSDKKANEKEVWVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALD 157 (1096)
Q Consensus 79 i~~i~~~~~d~~r~~~~~~~n~~~~~V~r~g~-~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~Lt 157 (1096)
++++||++||++|+++|+++|+++++|++++. +++..|++|+|||+|++..+|.+|||.+||+|++++|.|||+|++||
T Consensus 93 ~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLD 172 (1151)
T KOG0206|consen 93 ITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLD 172 (1151)
T ss_pred HHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecC
Confidence 99999999999999999999999999999644 89999999999999999999999999999999999999999999999
Q ss_pred CCCCcEeeeccccccCC-CHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEE
Q 001341 158 GETDLKTRLIPAACMGM-DFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236 (1096)
Q Consensus 158 GEs~~~~K~~~~~~~~~-~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~g 236 (1096)
||+++|.|++...+... +.+.+.++++.++||.|++++|.|+|++.+.+ ...|++.+|+++|||+++||+|++|
T Consensus 173 GEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~-----~~~pl~~~~~Llrg~~lrNT~~v~G 247 (1151)
T KOG0206|consen 173 GETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQG-----QIYPLSPDNLLLRGSRLRNTEWVYG 247 (1151)
T ss_pred CccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeecc-----CCCCCcHHHcccCCceeccCcEEEE
Confidence 99999999997766654 34558889999999999999999999998532 1228999999999999999999999
Q ss_pred EEEEecCcccccccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc---------cchHHHhHh
Q 001341 237 VAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKE---------FPWYELLVI 307 (1096)
Q Consensus 237 vVv~tG~~T~~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~~~~~~ 307 (1096)
+|++||++||++++...++.|++++++.+|+.+..+++++++++++..+...+|........ .+....+..
T Consensus 248 ~vv~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (1151)
T KOG0206|consen 248 VVVFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVH 327 (1151)
T ss_pred EEEEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888877666655322111 122345677
Q ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEE
Q 001341 308 PLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR 387 (1096)
Q Consensus 308 ~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~ 387 (1096)
+++++++++.+||+||+|++++.+..|+.||+||.+||+++++.|+.+|++++.|+||||+||++|||||||+|.|+|++
T Consensus 328 f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~k 407 (1151)
T KOG0206|consen 328 FLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKK 407 (1151)
T ss_pred HHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeec
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCEeecCCCcc---------------------CCCchhhHHhhhc---CChhHHHHHHHHhhhceeecccCCCC-ce
Q 001341 388 CCIGGIFYGNETGD---------------------ALKDVGLLNAITS---GSPDVIRFLTVMAVCNTVIPAKSKAG-AI 442 (1096)
Q Consensus 388 ~~~~~~~y~~~~~~---------------------~~~~~~~~~~~~~---~~~~~~~~l~~l~lc~~~~~~~~~~~-~~ 442 (1096)
|+++|..|+....+ ...++.+.+.... ..+...+|++++|+||++.++.++++ .+
T Consensus 408 Csi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~ 487 (1151)
T KOG0206|consen 408 CSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKL 487 (1151)
T ss_pred ccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccce
Confidence 99999999875322 1112222222222 34567799999999999999985444 89
Q ss_pred eeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhh
Q 001341 443 LYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAI 522 (1096)
Q Consensus 443 ~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~i 522 (1096)
.|+++||||.||+++|+++|+.+..|+++.+.+...+..++|++|+++||+|.|||||||||.+ +|++.+||||||++|
T Consensus 488 ~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p-~g~i~LycKGADsvI 566 (1151)
T KOG0206|consen 488 SYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDP-DGRILLYCKGADSVI 566 (1151)
T ss_pred eeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcC-CCcEEEEEcCcchhh
Confidence 9999999999999999999999999999999999778788999999999999999999999998 689999999999999
Q ss_pred hhhhccCC--chHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEe
Q 001341 523 LPYAHAGQ--QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVT 600 (1096)
Q Consensus 523 l~~~~~~~--~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~ 600 (1096)
++|++.++ ..++..+|+++||.+||||||+|||+++++||++|.++|++|+.+++||+++++++++.+|+||+++|++
T Consensus 567 ~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGAT 646 (1151)
T KOG0206|consen 567 FERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGAT 646 (1151)
T ss_pred HhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcce
Confidence 99998543 2467889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcH------HHHH---HHHHHH
Q 001341 601 AIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE------DEVC---RSLERV 671 (1096)
Q Consensus 601 ~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~------~~~~---~~~~~~ 671 (1096)
||||+||+||||+|++|++||||+||+|||+.|||++||++|+++.++++ ++.++..+. +... +.+...
T Consensus 647 AIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~--~i~i~~~~~~~~~~~~~~~~~~~~l~~~ 724 (1151)
T KOG0206|consen 647 AIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMK--LIIINTETSEELSSLDATAALKETLLRK 724 (1151)
T ss_pred eeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCce--EEEEecCChhhhcchhhHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999987 555554432 2111 111111
Q ss_pred ----HHHccccCCCCCcEEEEEcChhHHHHHHH-HHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh-cCCeEEEEcCC
Q 001341 672 ----LLTMRITTSEPKDVAFVVDGWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDG 745 (1096)
Q Consensus 672 ----~~~~~~~~~~~~~~~lvi~g~~l~~~~~~-~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~-~~~~v~~iGDG 745 (1096)
.........+ +..++++||+++.++++. .+.+|.+++..|++++|||++|.||+.+|+.+++ .+.+++|||||
T Consensus 725 ~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDG 803 (1151)
T KOG0206|consen 725 FTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDG 803 (1151)
T ss_pred hhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCC
Confidence 1111111122 479999999999999986 6679999999999999999999999999999985 68899999999
Q ss_pred ccChhhhhhcCeeEEecCCchHHHHhhccccccccchhhhHHHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhcc
Q 001341 746 GNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGL 825 (1096)
Q Consensus 746 ~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~ 825 (1096)
+||++|||+|||||||+|+||.||+++|||.+.+|+||.+|+|+||||+|.|+++++.|+||||+.+++++|||.++++|
T Consensus 804 ANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gf 883 (1151)
T KOG0206|consen 804 ANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGF 883 (1151)
T ss_pred CccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhHHHHHHHhHhhhHhHh-hhhccCCCChhhhhcCCccccccccCCccCchhHHHHHHHHHHHHHHHHHHhhhh
Q 001341 826 SGTSLFNSVSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHV 904 (1096)
Q Consensus 826 ~g~~~~~~~~ll~~n~~~~~lp~~-~~~~~~d~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 904 (1096)
||+++|++|++.+||++||++|++ +++||+|++++.++++|++|+.++++..++++.|+.|++.++||++++||+++..
T Consensus 884 Sgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~ 963 (1151)
T KOG0206|consen 884 SGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLV 963 (1151)
T ss_pred CCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhh
Confidence 999999999999999999999999 7899999999999999999999999999999999999999999999999999988
Q ss_pred cccc-------cccceehhhhhhHHHHHHHHhhhheeecchhHHHHHHHHHHHHHHHHHHHHHhh-cC----CchhHHHH
Q 001341 905 YAYE-------KSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSA-IP----SSGMYTIM 972 (1096)
Q Consensus 905 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~ 972 (1096)
+... ..+..++++..++..++.+.+.+.+++++|+|++++.+|+|++++|++.+++.. .| ..++++.+
T Consensus 964 ~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~ 1043 (1151)
T KOG0206|consen 964 FEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVA 1043 (1151)
T ss_pred heeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHH
Confidence 8531 123456677777777777788888999999999999999999999999888863 12 24567788
Q ss_pred HHhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHh
Q 001341 973 FRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAERM 1020 (1096)
Q Consensus 973 ~~~~~~~~~w~~~~l~~~~~l~~~~~~k~~~~~~~p~~~~~~~~~~~~ 1020 (1096)
.+++++|.||+++++++++|++|++++|.+++.++|++.+++|+.++.
T Consensus 1044 ~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~~ 1091 (1151)
T KOG0206|consen 1044 EHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEKY 1091 (1151)
T ss_pred HHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHhc
Confidence 899999999999999999999999999999999999999999999863
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-175 Score=1647.97 Aligned_cols=1012 Identities=34% Similarity=0.591 Sum_probs=893.0
Q ss_pred ccEEEeCCCcc--cccCCCCceeecCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHHH
Q 001341 2 KRYIYINDDET--SQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAV 79 (1096)
Q Consensus 2 ~r~~~~n~~~~--~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i 79 (1096)
+|.|++|++.. .+.+|+.|+++|+|||+|+|||++||+||++++|+|||+++++|++|.+++.++.++++||++++++
T Consensus 70 ~r~i~~~~~~~~~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v 149 (1178)
T PLN03190 70 ARLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLV 149 (1178)
T ss_pred ceEEEcCCCCcccccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHH
Confidence 59999999742 2347999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCC
Q 001341 80 SATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1096)
Q Consensus 80 ~~i~~~~~d~~r~~~~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGE 159 (1096)
+++++++||++|+++|++.|+++++|+|+|.+++++|++|+|||||+|++||+||||++||+|++++|.|+||||+||||
T Consensus 150 ~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGE 229 (1178)
T PLN03190 150 TAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGE 229 (1178)
T ss_pred HHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEE
Q 001341 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (1096)
Q Consensus 160 s~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv 239 (1096)
|+||.|.+...+... .....++++.++||.||+++|+|+|++++. ++..|++.+|+++|||.++||+|++|+|+
T Consensus 230 t~~k~k~~~~~~~~~-~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~-----~~~~~l~~~n~llRG~~LrnT~~i~GvVV 303 (1178)
T PLN03190 230 SNLKTRYAKQETLSK-IPEKEKINGLIKCEKPNRNIYGFQANMEVD-----GKRLSLGPSNIILRGCELKNTAWAIGVAV 303 (1178)
T ss_pred eeeeEecccchhhhc-chhhhhceEEEEEeCCCccceeEEEEEEEC-----CCcccCCccceeeccceecCCceEEEEEE
Confidence 999999887654321 123456789999999999999999999873 34568899999999999999999999999
Q ss_pred EecCcccccccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc------------------ccc-
Q 001341 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK------------------EFP- 300 (1096)
Q Consensus 240 ~tG~~T~~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------------------~~~- 300 (1096)
|||+|||++++...++.|.|++|+.+|+++.+++++++++|+++++++..|....... ..+
T Consensus 304 YTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 383 (1178)
T PLN03190 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNY 383 (1178)
T ss_pred EechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999888888877665553211000 000
Q ss_pred --h-HHHhHhHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCC
Q 001341 301 --W-YELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 377 (1096)
Q Consensus 301 --~-~~~~~~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGT 377 (1096)
| ...+..+++++++++.+||+||+|+++++|..|+++|.||.+|+++..+.++.+|+++++|+||+|+|||||||||
T Consensus 384 ~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGT 463 (1178)
T PLN03190 384 YGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGT 463 (1178)
T ss_pred chhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCc
Confidence 1 1234556667788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEEcCEeecCCCccC----------------------CCchhhHHhhhc-----CChhHHHHHHHHhhhc
Q 001341 378 LTENRMIFRRCCIGGIFYGNETGDA----------------------LKDVGLLNAITS-----GSPDVIRFLTVMAVCN 430 (1096)
Q Consensus 378 LT~n~m~v~~~~~~~~~y~~~~~~~----------------------~~~~~~~~~~~~-----~~~~~~~~l~~l~lc~ 430 (1096)
||+|+|+|++|+++|..|+...... ..++.+.+.... ..+.+.+|+.++++||
T Consensus 464 LT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalCh 543 (1178)
T PLN03190 464 LTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACN 543 (1178)
T ss_pred cccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcC
Confidence 9999999999999999986431100 011122211111 1124678999999999
Q ss_pred eeecccCC---C---CceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEE
Q 001341 431 TVIPAKSK---A---GAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVK 504 (1096)
Q Consensus 431 ~~~~~~~~---~---~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~ 504 (1096)
++.+...+ + +.+.|+++||||.||+++|+++|+.+.+|+++.+.++..+...+|++++++||+|+||||||+++
T Consensus 544 tv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~ 623 (1178)
T PLN03190 544 TIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILG 623 (1178)
T ss_pred CceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEE
Confidence 99885321 2 23679999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCeEEEEecChhhhhhhhhccC---CchHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHH
Q 001341 505 DCHSGNISLLSKGADEAILPYAHAG---QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 581 (1096)
Q Consensus 505 ~~~~~~~~l~~KGa~~~il~~~~~~---~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~ 581 (1096)
++ ++++++|+||||++|+++|... ...+++.+++++||++|+||||+|||+++++|+++|.++|++|..++.+|++
T Consensus 624 ~~-~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~ 702 (1178)
T PLN03190 624 CP-DKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAA 702 (1178)
T ss_pred cC-CCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHH
Confidence 86 6789999999999999999743 2356788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcH
Q 001341 582 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE 661 (1096)
Q Consensus 582 ~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~ 661 (1096)
.++++.+++|+||+++|+++++|++|++++++|+.|++|||++||+|||+.+||++||++|||+++++. .+.+++...
T Consensus 703 ~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~--~i~i~~~~~ 780 (1178)
T PLN03190 703 LLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMT--QIIINSNSK 780 (1178)
T ss_pred HHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCe--eEEecCCch
Confidence 999999999999999999999999999999999999999999999999999999999999999998765 566666655
Q ss_pred HHHHHHHHHHHHHcc--------------ccCCCCCcEEEEEcChhHHHHHH-HHHHHHhhhhhccceeEEEeeChhhHH
Q 001341 662 DEVCRSLERVLLTMR--------------ITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKA 726 (1096)
Q Consensus 662 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~lvi~g~~l~~~~~-~~~~~f~~l~~~~~~~i~~r~tP~qK~ 726 (1096)
++....++..+...+ .......+.++++||.+|+.+++ ++++.|.+++..|+++||||++|.||+
T Consensus 781 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa 860 (1178)
T PLN03190 781 ESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKA 860 (1178)
T ss_pred hhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHH
Confidence 544444433221100 00112356789999999999986 467789999999999999999999999
Q ss_pred HHHHHHHhc-CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccchhhhHHHhhchhhhhhhhhhhhHh
Q 001341 727 QLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYS 805 (1096)
Q Consensus 727 ~iV~~lk~~-~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l~~lll~~GR~~~~~i~~~i~~~ 805 (1096)
++|+.+|+. +++|+|||||+||++|||+||||||++|+||.||+++|||+|.+|++|.+|+++||||+|.|+++++.|+
T Consensus 861 ~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~ 940 (1178)
T PLN03190 861 GIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYN 940 (1178)
T ss_pred HHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999986 5899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHh-hhhccCCCChhhhhcCCccccccccCCccCchhHH
Q 001341 806 FYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFA 884 (1096)
Q Consensus 806 ~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~-~~~~~~d~~~~~~~~~p~~y~~~~~~~~~~~~~~~ 884 (1096)
||||+++++++|||+++++|||+++|++|.+++||++||++|++ +++||+|++++.++++|++|+.+++++.++.+.|+
T Consensus 941 fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~ 1020 (1178)
T PLN03190 941 FYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFW 1020 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHH
Confidence 99999999999999999999999999999999999999999999 67999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccccccceehhhhhhHHHHHHHHhhhheeecchhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001341 885 GWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSAIP 964 (1096)
Q Consensus 885 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 964 (1096)
.|++.|+|||+++||++++.+.....+..+.+...+++++++..+.+.+++++|+|++++++|+++++++++.+++..++
T Consensus 1021 ~w~~~~i~qs~iiff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~ 1100 (1178)
T PLN03190 1021 LTMIDTLWQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIVIDAIP 1100 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999887754433444556666777788888888899999999999999999999998888887776
Q ss_pred CchhHHHHHHhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhcC
Q 001341 965 SSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAERMGG 1022 (1096)
Q Consensus 965 ~~~~~~~~~~~~~~~~~w~~~~l~~~~~l~~~~~~k~~~~~~~p~~~~~~~~~~~~~~ 1022 (1096)
....|+.++.++.++.||+.++++++++++|++++|++++.++|+.++++|+.++.+.
T Consensus 1101 ~~~~~~~~~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~~~~~~ 1158 (1178)
T PLN03190 1101 TLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREAEKFGT 1158 (1178)
T ss_pred cchhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhcc
Confidence 5555667778888999999999999999999999999999999999999998765433
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-161 Score=1543.46 Aligned_cols=991 Identities=39% Similarity=0.699 Sum_probs=873.6
Q ss_pred CCCceeecCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHHhhhhH
Q 001341 17 YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDK 96 (1096)
Q Consensus 17 ~g~N~i~~~k~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~i~~~~~d~~r~~~~~ 96 (1096)
|++|+++|+||++|+|+|++||+||++++|+|||+++++|++|.+++.++.++++|++++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceEEEEEEC-CeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeeeccccccCC-
Q 001341 97 KANEKEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGM- 174 (1096)
Q Consensus 97 ~~n~~~~~V~r~-g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~- 174 (1096)
+.|+++++|+|+ |++++++|+||+|||||+|++||+||||++||+|++++|.|+||||+|||||+||.|++...+...
T Consensus 81 ~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~ 160 (1057)
T TIGR01652 81 EVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKML 160 (1057)
T ss_pred HHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccC
Confidence 999999999997 899999999999999999999999999999999999999999999999999999999987655433
Q ss_pred CHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCcccccccCCCC
Q 001341 175 DFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGIP 254 (1096)
Q Consensus 175 ~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~~~ 254 (1096)
+...+.++++.++|+.|++++|+|+|++++.+ .+..|++.+|+++|||.+++|+|++|+|+|||++|+++++....
T Consensus 161 ~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~----~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~ 236 (1057)
T TIGR01652 161 DEDDIKNFSGEIECEQPNASLYSFQGNMTING----DRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQA 236 (1057)
T ss_pred ChhhHhhceEEEEEcCCCCcceEEEEEEEECC----CCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCC
Confidence 44567788999999999999999999998743 24568999999999999999889999999999999999999888
Q ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchH------------HHhHhHHHHHHHhhcccchH
Q 001341 255 EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWY------------ELLVIPLRFELLCSIMIPIS 322 (1096)
Q Consensus 255 ~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~iP~~ 322 (1096)
+.|.|++++.+|+++.+++.+++++|+++++++..|...... ..|| ..+..+++++++++.+||++
T Consensus 237 ~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~--~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPis 314 (1057)
T TIGR01652 237 PSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK--DLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPIS 314 (1057)
T ss_pred cccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCC--CccceecCcccccchhHHHHHHHHHHHHHhhhccee
Confidence 999999999999999999988888888777765555431111 1222 23445667788999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCCcc-
Q 001341 323 IKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGD- 401 (1096)
Q Consensus 323 L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~~~- 401 (1096)
|++++++++.+++++|+||.+|++++.+.++.+|+++++|+||+|+|||||||||||+|+|+|++|+++|..|+....+
T Consensus 315 L~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~ 394 (1057)
T TIGR01652 315 LYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEI 394 (1057)
T ss_pred eeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchH
Confidence 9999999999999999999999998888889999999999999999999999999999999999999999988743210
Q ss_pred -------------------------CCCchhhHHhhhc---CChhHHHHHHHHhhhceeecccC--CCCceeeecCCccH
Q 001341 402 -------------------------ALKDVGLLNAITS---GSPDVIRFLTVMAVCNTVIPAKS--KAGAILYKAQSQDE 451 (1096)
Q Consensus 402 -------------------------~~~~~~~~~~~~~---~~~~~~~~l~~l~lc~~~~~~~~--~~~~~~~~~~sp~e 451 (1096)
...++++.+.... ..+...+++.++++||++.+..+ +++.+.|+++||+|
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E 474 (1057)
T TIGR01652 395 KDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDE 474 (1057)
T ss_pred HHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcH
Confidence 0011222222211 12346789999999999988752 22457799999999
Q ss_pred HHHHHHHHhcCeEEeeeCCc--EEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccC
Q 001341 452 EALVHAAAQLHMVLVNKNAS--ILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG 529 (1096)
Q Consensus 452 ~Al~~~a~~~g~~~~~~~~~--~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~ 529 (1096)
.||+++|+++|+.+.+|+++ .+.++..+....|++++++||+|+||||||+++++ ++++++|+||||++|+++|...
T Consensus 475 ~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~-~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 475 AALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNP-DGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeC-CCeEEEEEeCcHHHHHHHhhcc
Confidence 99999999999999999887 45566778888999999999999999999999986 5789999999999999999853
Q ss_pred --CchHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCC
Q 001341 530 --QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQ 607 (1096)
Q Consensus 530 --~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr 607 (1096)
...+++.+++++|+.+|+|||++|||.++++|+++|.++|+++..++.+|++.+++.++++|+||+|+|++|+|||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 234678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHH---HHHHHHHHHcc---ccCCC
Q 001341 608 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVC---RSLERVLLTMR---ITTSE 681 (1096)
Q Consensus 608 ~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~ 681 (1096)
++|+++|+.|++|||++||+|||+++||++||++||+++++.. ++.+++.+.++.. ..+.+...... .....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~--~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 711 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNME--QIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGD 711 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCe--EEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhcc
Confidence 9999999999999999999999999999999999999987654 6666665544332 12221111100 01122
Q ss_pred CCcEEEEEcChhHHHHHHH-HHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhc-CCeEEEEcCCccChhhhhhcCeeE
Q 001341 682 PKDVAFVVDGWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGV 759 (1096)
Q Consensus 682 ~~~~~lvi~g~~l~~~~~~-~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~-~~~v~~iGDG~ND~~ml~~AdvGI 759 (1096)
..+.+++++|++++.++++ .+++|.++...++++||||++|+||+++|+.+|+. |++|+|||||+||++||++|||||
T Consensus 712 ~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGI 791 (1057)
T TIGR01652 712 SGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV 791 (1057)
T ss_pred CCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeee
Confidence 4577899999999988775 57789999888999999999999999999999987 999999999999999999999999
Q ss_pred EecCCchHHHHhhccccccccchhhhHHHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHH
Q 001341 760 GISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAY 839 (1096)
Q Consensus 760 am~g~~~~~a~~~aD~vl~~f~~l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~ 839 (1096)
|++|++|.||+++||+++.+|++|.+++++|||++|+|+++++.|.||||+++.++++||+++++|+|+++|++++++||
T Consensus 792 gi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~ 871 (1057)
T TIGR01652 792 GISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLY 871 (1057)
T ss_pred EecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhhhHhHhh-hhccCCCChhhhhcCCccccccccCCccCchhHHHHHHHHHHHHHHHHHHhhhhccccc-------cc
Q 001341 840 NVFYTSIPVLV-STIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEK-------SE 911 (1096)
Q Consensus 840 n~~~~~lp~~~-~~~~~d~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-------~~ 911 (1096)
|+++|++|+++ +++|+|++++.++++|++|+.+++++.++.+.|+.|++.|+|||+++|+++++.+.... .+
T Consensus 872 n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~ 951 (1057)
T TIGR01652 872 NVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLDD 951 (1057)
T ss_pred HHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcccc
Confidence 99999999995 58999999999999999999999999999999999999999999999999887765422 12
Q ss_pred ceehhhhhhHHHHHHHHhhhheeecchhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHHHhhcCHhHHHHHHHHHH
Q 001341 912 MEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSAIP-SSGMYTIMFRLCSQPSYWITMFLIVA 990 (1096)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~w~~~~l~~~ 990 (1096)
...+++..|+.+++...+.+.+.+++|+|+++.++|+++++|+++.+++...+ ..+.|+.+..++.+|.+|+.++++++
T Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~ 1031 (1057)
T TIGR01652 952 FSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVL 1031 (1057)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHH
Confidence 34567788888888888888889999999999999999999988877776443 44567777888889999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHH
Q 001341 991 AGMGPIVALKYFRYTYRASKINILQQ 1016 (1096)
Q Consensus 991 ~~l~~~~~~k~~~~~~~p~~~~~~~~ 1016 (1096)
++++|.++++++++.|+|+.++++||
T Consensus 1032 ~~l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 1032 ISLLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHhhC
Confidence 99999999999999999999999864
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-150 Score=1240.87 Aligned_cols=967 Identities=33% Similarity=0.534 Sum_probs=848.1
Q ss_pred ccEEEeCC-CcccccCCCCceeecCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHHHH
Q 001341 2 KRYIYIND-DETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVS 80 (1096)
Q Consensus 2 ~r~~~~n~-~~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~ 80 (1096)
.|++.+.. +..++.+|++|.+++.||++++|+|..+++||+-+.|+|||+.++.|++|.+....+.++|.|+.+++.++
T Consensus 63 ~rt~~~~~~~~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~it 142 (1051)
T KOG0210|consen 63 GRTVNISFGPHYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTIT 142 (1051)
T ss_pred CceeecccCCCcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHH
Confidence 45555544 22467899999999999999999999999999999999999999999999888788889999999999999
Q ss_pred HHHHHHHHHHHhhhhHhhcceEEEEE-ECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCC
Q 001341 81 ATKEAWDDYNRYLSDKKANEKEVWVV-KQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1096)
Q Consensus 81 ~i~~~~~d~~r~~~~~~~n~~~~~V~-r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGE 159 (1096)
+++|+++|++|++.|++.|+...+++ |+|.. ..++++|+|||+|.++.|++||||+++|.++|++|+|+|.|..||||
T Consensus 143 l~keavdd~~r~~rd~~~Nse~y~~ltr~~~~-~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGE 221 (1051)
T KOG0210|consen 143 LIKEAVDDLKRRRRDRELNSEKYTKLTRDGTR-REPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGE 221 (1051)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhheeeccCCcc-cccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCc
Confidence 99999999999999999999999888 55544 44999999999999999999999999999999999999999999999
Q ss_pred CCcEeeeccccccCCCHh-hhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEE
Q 001341 160 TDLKTRLIPAACMGMDFE-LLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238 (1096)
Q Consensus 160 s~~~~K~~~~~~~~~~~~-~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvV 238 (1096)
|++|.|.|.+.++.++.+ ++.+++ +..|.|++++++|-|++++.. ++++++++.+|+++++|.+.+| .++|+|
T Consensus 222 TDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d---~~~~~~LsventLWanTVvAs~-t~~gvV 295 (1051)
T KOG0210|consen 222 TDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITD---SDKPESLSVENTLWANTVVASG-TAIGVV 295 (1051)
T ss_pred ccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEec---CCCCCcccccceeeeeeeEecC-cEEEEE
Confidence 999999999888887654 666666 889999999999999999854 4455899999999999999998 599999
Q ss_pred EEecCcccccccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcc
Q 001341 239 VYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIM 318 (1096)
Q Consensus 239 v~tG~~T~~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 318 (1096)
+|||.||+..+|...++.|-.-++..+|.+.++++.+++++++++.....+ ...||..+ ++|+++++..
T Consensus 296 vYTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~--------~~~wyi~~---~RfllLFS~I 364 (1051)
T KOG0210|consen 296 VYTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF--------GSDWYIYI---IRFLLLFSSI 364 (1051)
T ss_pred EEecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC--------CCchHHHH---HHHHHHHhhh
Confidence 999999999999999999999999999999999999988888776654211 34677655 6788899999
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCC
Q 001341 319 IPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE 398 (1096)
Q Consensus 319 iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~ 398 (1096)
||++|-|+++++|.+.++.|..|.++- +..+|++.+.|+||+|+|+.+|||||||+|+|.+++++.+-..|..+
T Consensus 365 IPISLRvnlDmaK~~ys~~i~~D~~Ip------gtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e 438 (1051)
T KOG0210|consen 365 IPISLRVNLDMAKIVYSWQIEHDKNIP------GTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAE 438 (1051)
T ss_pred ceeEEEEehhHHHhhHhhhcccCCCCC------ceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHh
Confidence 999999999999999999888887763 36799999999999999999999999999999999999998877643
Q ss_pred CccCCC-------------chhhHHhh-hcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeE
Q 001341 399 TGDALK-------------DVGLLNAI-TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMV 464 (1096)
Q Consensus 399 ~~~~~~-------------~~~~~~~~-~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~ 464 (1096)
..+... .+-..... ..-...+.+..+++|+||++.|..++||...|++.||||.||+++....|+.
T Consensus 439 ~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~ 518 (1051)
T KOG0210|consen 439 TMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLK 518 (1051)
T ss_pred HHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceE
Confidence 211110 00000000 0112356788999999999999999999999999999999999999999999
Q ss_pred EeeeCCcEEEEEeC-CeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCchHHHHHHHHHHH
Q 001341 465 LVNKNASILEIKFN-GSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYS 543 (1096)
Q Consensus 465 ~~~~~~~~~~~~~~-~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~~~~~~~~~~~~a 543 (1096)
+..|+.+.+.+... +...+|++|.++||+|+.|||++|||++.++++..|.||||.+|-...+.+ +++++....+|
T Consensus 519 L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N---dWleEE~gNMA 595 (1051)
T KOG0210|consen 519 LAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN---DWLEEECGNMA 595 (1051)
T ss_pred EeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc---hhhhhhhhhhh
Confidence 99999999988764 567899999999999999999999999989999999999999998876543 78999999999
Q ss_pred hccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHH-HhhcCcEEEEEeeccccCCCChHHHHHHHHHcCC
Q 001341 544 QLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ-RLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGI 622 (1096)
Q Consensus 544 ~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGI 622 (1096)
++|+|||++|+|.++++||+.|...|+.|+.++.||.+++.++.+ .+|+||++||++|+||+||++|+.+++.||+|||
T Consensus 596 REGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgi 675 (1051)
T KOG0210|consen 596 REGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGI 675 (1051)
T ss_pred hhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCc
Confidence 999999999999999999999999999999999999999999887 8999999999999999999999999999999999
Q ss_pred eEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCC-cHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHH
Q 001341 623 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK-TEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHY 701 (1096)
Q Consensus 623 kv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~ 701 (1096)
|+||+|||+.|||+.||++.+|++.++. +..+... ...+....++.. ....+.++++||++|+.+++.+
T Consensus 676 kiWMLTGDKlETA~ciAkSs~L~sR~q~--ihv~~~v~sr~dah~eL~~l--------R~k~~~aLvi~G~Sl~~cl~yy 745 (1051)
T KOG0210|consen 676 KIWMLTGDKLETAICIAKSSRLFSRGQY--IHVIRSVTSRGDAHNELNNL--------RRKTDCALVIDGESLEFCLKYY 745 (1051)
T ss_pred EEEEEcCcchhheeeeehhccceecCce--EEEEEecCCchHHHHHHHHh--------hcCCCcEEEEcCchHHHHHHHH
Confidence 9999999999999999999999998765 3333322 233333333222 2456789999999999999999
Q ss_pred HHHHhhhhhccceeEEEeeChhhHHHHHHHHHh-cCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcccccccc
Q 001341 702 RKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 702 ~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~-~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
+++|.+++..+.+++|||++|.||+++++.+|+ .|..|++||||.||+.|||+||+|||+.|+||.||.-||||.|++|
T Consensus 746 e~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF 825 (1051)
T KOG0210|consen 746 EDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQF 825 (1051)
T ss_pred HHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHH
Confidence 999999999999999999999999999999997 5889999999999999999999999999999999999999999999
Q ss_pred chhhhHHHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhccCCCChh
Q 001341 781 RFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEG 860 (1096)
Q Consensus 781 ~~l~~lll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~d~~~~ 860 (1096)
+++.+|+++|||.+|.|.+++.+|.+.|.++++.+|..|+....|...++|..+.|..|..++|.+|++.+++|+|++++
T Consensus 826 ~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~ 905 (1051)
T KOG0210|consen 826 SHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSES 905 (1051)
T ss_pred HHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCccccccccCCccCchhHHHHHHHHHHHHHHHHHHhhhhcccccccceehhhhhhHHHHHHHHhhhheeecchhH
Q 001341 861 TVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTV 940 (1096)
Q Consensus 861 ~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (1096)
..+.+|++|+.-..++.++.++|+.|++-++|||.++.++.+..+.. +...+..++|++.++..++.+++..++|+|
T Consensus 906 ~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~---ef~~ivaisFtaLi~tELiMVaLtv~tw~~ 982 (1051)
T KOG0210|consen 906 LAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDT---EFIHIVAISFTALILTELIMVALTVRTWHW 982 (1051)
T ss_pred HHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhh---hheEeeeeeeHHHHHHHHHHHhhhhhhhhH
Confidence 99999999999999999999999999999999999998876655532 223455677888888888899999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Q 001341 941 FQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQ 1015 (1096)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~~~~~l~~~~~~k~~~~~~~p~~~~~~~ 1015 (1096)
....+-..++..+++...... +++..-+ ..+..|+.-+.++.+++++|.++.|++++.+.|+.+.+++
T Consensus 983 ~m~vae~lsL~~Yivsl~~l~-----~yfd~~f--~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl~ 1050 (1051)
T KOG0210|consen 983 LMVVAELLSLALYIVSLAFLH-----EYFDRYF--ILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAKLQ 1050 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----hHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhcc
Confidence 776666666555543322111 1111112 2367777778888999999999999999999999998875
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-117 Score=1112.76 Aligned_cols=811 Identities=28% Similarity=0.405 Sum_probs=639.5
Q ss_pred ccccCCCCceeecCCC-ccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCcc-chhhHHHHHHHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPA-STWGPLIFIFAVSATKEAWDDY 89 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~-~~~~~l~~i~~i~~i~~~~~d~ 89 (1096)
+|++.||.|+++..+. ++| +.++.||.++++..+++.++++++... ..+. ..+..++.+++++++..++|++
T Consensus 52 ~r~~~~G~N~~~~~~~~~~~----~~fl~~f~~~~~~iL~~~a~~s~~~~~--~~~~~~~~~~I~~~i~~n~~~g~~qe~ 125 (917)
T COG0474 52 RRLKKYGPNELPEEKKRSLL----KKFLRQFKDPFIILLLVAALLSAFVGD--WVDAGVDAIVILLVVVINALLGFVQEY 125 (917)
T ss_pred HHHhhcCCccccccccCcHH----HHHHHHHHHHHHHHHHHHHHHHHHhhc--ccccCcceeeehHHHHHHHHHHHHHHH
Confidence 4778999999998765 655 889999999999888888888876431 1111 2333445566677778889999
Q ss_pred HHhh---hhHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeee
Q 001341 90 NRYL---SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (1096)
Q Consensus 90 ~r~~---~~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~ 166 (1096)
++.+ +++++.+.+++|+|||++++|+|+||||||||+|++||+||||++|+++++ ++||||+|||||+|+.|+
T Consensus 126 ~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K~ 201 (917)
T COG0474 126 RAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEKQ 201 (917)
T ss_pred HHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhcc
Confidence 9854 677888999999999999999999999999999999999999999998886 699999999999999997
Q ss_pred ccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCccc
Q 001341 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (1096)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~ 246 (1096)
+..... .+.|. .++.+|++|+||.+++| .+.|+|++||.+|+
T Consensus 202 ~~~~~~---------------~~~~~----------------------~~d~~n~l~sGt~V~~G-~~~giVvaTG~~T~ 243 (917)
T COG0474 202 ALPLTK---------------SDAPL----------------------GLDRDNMLFSGTTVVSG-RAKGIVVATGFETE 243 (917)
T ss_pred cccccc---------------ccccc----------------------cCCccceEEeCCEEEcc-eEEEEEEEEcCccH
Confidence 543210 00000 03678999999999999 69999999999999
Q ss_pred ccccCCC---CCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcccchHH
Q 001341 247 LGMTRGI---PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIPISI 323 (1096)
Q Consensus 247 ~~~~~~~---~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L 323 (1096)
+|+++.. ...+.+++++.++++...++.+.++++++.++.+. +.. ..+|...+..++ .+++++||++|
T Consensus 244 ~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~-~~~-----~~~~~~~~~~~v---~l~va~IPegL 314 (917)
T COG0474 244 FGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGL-FRG-----GNGLLESFLTAL---ALAVAAVPEGL 314 (917)
T ss_pred HHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-----CccHHHHHHHHH---HHHHhccccch
Confidence 9998763 22578999999999999999988888877776652 221 112666665444 48999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCCccCC
Q 001341 324 KVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDAL 403 (1096)
Q Consensus 324 ~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~~~~~ 403 (1096)
|+++++++.+++..+.+|. +.+|+++++|+||++++||||||||||+|+|+|++|++++. ..+ .+
T Consensus 315 p~~vti~la~g~~~mak~~----------~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~--~~~-~~-- 379 (917)
T COG0474 315 PAVVTIALALGAQRMAKDN----------AIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG--GKD-ID-- 379 (917)
T ss_pred HHHHHHHHHHHHHHHHhcc----------chhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCC--ccc-cc--
Confidence 9999999999888555443 66899999999999999999999999999999999999851 000 00
Q ss_pred CchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEE
Q 001341 404 KDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQ 483 (1096)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~ 483 (1096)
+ .....++...+++.++++||++.+..+ + .+..+||+|.||++++.+.|+.+ +. ......
T Consensus 380 -~-----~~~~~~~~~~~~l~~~~lc~~~~~~~~-~---~~~~gdptE~Al~~~a~~~~~~~---~~-------~~~~~~ 439 (917)
T COG0474 380 -D-----KDLKDSPALLRFLLAAALCNSVTPEKN-G---WYQAGDPTEGALVEFAEKLGFSL---DL-------SGLEVE 439 (917)
T ss_pred -c-----cccccchHHHHHHHHHHhcCccccccc-C---ceecCCccHHHHHHHHHhcCCcC---CH-------HHHhhh
Confidence 0 011123445578999999999988765 3 67899999999999999998743 11 234556
Q ss_pred EEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhcc--------CCchHHHHHHHHHHHhccceEEEEEEE
Q 001341 484 YEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--------GQQTRTFVEAVEQYSQLGLRTLCLAWR 555 (1096)
Q Consensus 484 ~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~--------~~~~~~~~~~~~~~a~~GlR~l~~A~k 555 (1096)
|++++.+||+|+|||||++++.. ++++++++|||||+|+++|+. +...+.+.+..++|+++|||||++|||
T Consensus 440 ~~~~~~~PFdS~rKrMsviv~~~-~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k 518 (917)
T COG0474 440 YPILAEIPFDSERKRMSVIVKTD-EGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYK 518 (917)
T ss_pred cceeEEecCCCCceEEEEEEEcC-CCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78999999999999999999964 566999999999999999984 123467899999999999999999999
Q ss_pred ecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHH
Q 001341 556 EVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTA 635 (1096)
Q Consensus 556 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta 635 (1096)
.+++++... +. +++|+||+|+|+++|+||||+++++||+.|++|||++||+||||++||
T Consensus 519 ~~~~~~~~~--------------------~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA 577 (917)
T COG0474 519 KLDRAEKDD--------------------EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETA 577 (917)
T ss_pred cCCcccccc--------------------hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHH
Confidence 776543210 11 578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhcccee
Q 001341 636 IQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTA 715 (1096)
Q Consensus 636 ~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~ 715 (1096)
++||++||+...... .+++||.+|+.+.++ +|.+.... ..
T Consensus 578 ~aIa~~~Gi~~~~~~-----------------------------------~~vi~G~el~~l~~~---el~~~~~~--~~ 617 (917)
T COG0474 578 IAIAKECGIEAEAES-----------------------------------ALVIDGAELDALSDE---ELAELVEE--LS 617 (917)
T ss_pred HHHHHHcCCCCCCCc-----------------------------------eeEeehHHhhhcCHH---HHHHHhhh--Cc
Confidence 999999998544320 567888888777654 23332222 34
Q ss_pred EEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHh-hccccccccchhhhH-HHhhchh
Q 001341 716 ICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRL-ILVHGRY 793 (1096)
Q Consensus 716 i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~aD~vl~~f~~l~~l-ll~~GR~ 793 (1096)
||||++|+||.++|+.+|+.|++|+|+|||+||+||||+||||||| |.+|++|++ +||+++.++++.... .++|||+
T Consensus 618 VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIam-g~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~ 696 (917)
T COG0474 618 VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAM-GGEGTDAAKEAADIVLLDDNFATIVLAVVEGRR 696 (917)
T ss_pred EEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEe-cccHHHHHHhhcceEeecCcHHHHHHHHHHhHH
Confidence 9999999999999999999999999999999999999999999999 667888877 889999998886665 5799999
Q ss_pred hhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhccCCCChhhhhcCCccccccc
Q 001341 794 SYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQ 873 (1096)
Q Consensus 794 ~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~d~~~~~~~~~p~~y~~~~ 873 (1096)
+|.|+++++.|.+++|+...++++++.+++.+ ..||+++|++|+|++++++|++++++++ ++.+.|++|| .+.
T Consensus 697 ~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~~~qll~inll~d~~pa~~L~~~~--~~~~~m~~~~---~~p 769 (917)
T COG0474 697 VYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDSLPALALGVED--PESDVMKRPP---RGP 769 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHhhhhhheeecCC--CcccccccCC---CCc
Confidence 99999999999999999999999999888776 6789999999999999999999887775 7888999996 477
Q ss_pred cCCccCchhHHHHHHHHHHHHHHHHHHhhhhccccccc--------ceehhhhhhHHHHH---HHHhhhheeecchh---
Q 001341 874 AGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSE--------MEEVSMVALSGCIW---LQAFVVALETNSFT--- 939 (1096)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--- 939 (1096)
.+.+|+.+.++.|++...+++.++++++|..+...... .....+..|....+ +..+.++...+.|.
T Consensus 770 ~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (917)
T COG0474 770 EEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSL 849 (917)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcc
Confidence 78899999999999998899888888877665433211 11122333443333 34455555544432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhhc-CHhHHHHHH
Q 001341 940 VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMF 986 (1096)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~ 986 (1096)
++.+..+|+++++..++++...+.|.... ..++... +...|+..+
T Consensus 850 ~~~n~~~~~~~~~~~~l~l~~~~~~~~~~--~~f~~~~~~~~~~~~~~ 895 (917)
T COG0474 850 LFSNKYLWLALLVIIILQLLIIFLPPLNL--KIFQPTPLSLFEWLIAI 895 (917)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHhHHhHh--hhccCCCCcHHHHHHHH
Confidence 23677777777777777666666554331 2233322 345565443
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-116 Score=1006.84 Aligned_cols=861 Identities=21% Similarity=0.245 Sum_probs=645.2
Q ss_pred ccccCCCCceeecCCC-ccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~i~~~~~d~~ 90 (1096)
.|++.||.|+++.... +.| +.+++||.+++..++|+.|+++++... +...+.+.++++++++..++|||+
T Consensus 31 ~r~~~yG~Nel~~ee~~~~w----k~vLeQF~n~Li~iLL~sA~ISfvl~~-----~~e~~vI~liiv~nvtVG~~QEy~ 101 (972)
T KOG0202|consen 31 RRRKKYGENELPAEEGESLW----KLVLEQFDNPLILILLLSAAISFVLAD-----FDEPFVITLIIVINVTVGFVQEYN 101 (972)
T ss_pred HHHHhcCCccCccccCCcHH----HHHHHHHHhHHHHHHHHHHHHHHHHHh-----cccceeeeeeeeeeeeeeeeeehh
Confidence 4788999999998664 666 999999999999999999999987542 122233344556777889999999
Q ss_pred Hhhh---hHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeeec
Q 001341 91 RYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLI 167 (1096)
Q Consensus 91 r~~~---~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~ 167 (1096)
..|+ ++++.++.++|+|+|+.+.+++++|||||||.|+-||+||||.+|++..+ +.||||+|||||.|+.|.+
T Consensus 102 aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~t 177 (972)
T KOG0202|consen 102 AEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKDT 177 (972)
T ss_pred hHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCcccccccC
Confidence 9875 56778899999999999999999999999999999999999999999887 8999999999999999953
Q ss_pred cccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCcccc
Q 001341 168 PAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKL 247 (1096)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~ 247 (1096)
... | .+++..--+..|++|+||.+.+| .+.|+|+.||.+|.+
T Consensus 178 ~~v--------------------~-----------------~~~~~~~~dk~NiaFsGT~V~~G-~a~GIVi~TG~nTei 219 (972)
T KOG0202|consen 178 DAV--------------------P-----------------KDENADVQDKKNIAFSGTLVVAG-RAKGIVIGTGLNTEI 219 (972)
T ss_pred ccc--------------------c-----------------CCCCCccccceeeEeecceeecC-ceeEEEEeccccchH
Confidence 210 0 01111112688999999999999 799999999999999
Q ss_pred cccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhh--cccc-cccccccccchHHHhHhHHHHHHHhhcccch
Q 001341 248 GMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTA--GNVW-KDTEARKEFPWYELLVIPLRFELLCSIMIPI 321 (1096)
Q Consensus 248 ~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~ 321 (1096)
|++.. ..+..+||+|+.++.+...+.-+..++++.+.++ +.+. ....+..-..+...|.++++ |.+++||+
T Consensus 220 G~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVs---LAVAAIPE 296 (972)
T KOG0202|consen 220 GKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVS---LAVAAIPE 296 (972)
T ss_pred HHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHH---HHHHhccC
Confidence 98754 4566679999999999887763333333322222 2111 00000001234444555544 88999999
Q ss_pred HHH--HHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCC-
Q 001341 322 SIK--VSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE- 398 (1096)
Q Consensus 322 ~L~--vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~- 398 (1096)
||| +|..++.+.. +|.+++ +.+|++.++|+||.+++||||||||||+|+|++.++++.+..+...
T Consensus 297 GLPaVvT~tLALG~~--------rMakkn----aIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~ 364 (972)
T KOG0202|consen 297 GLPAVVTTTLALGTR--------RMAKKN----AIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVD 364 (972)
T ss_pred CCcchhhhhHHHhHH--------HHHhhh----hhhhcccchhhccceeEEecCCCCcccccceEEEEEEeccccccccc
Confidence 997 5666666665 787765 8899999999999999999999999999999999999987655433
Q ss_pred ----Cc-------cCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEee
Q 001341 399 ----TG-------DALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVN 467 (1096)
Q Consensus 399 ----~~-------~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~ 467 (1096)
.+ +...+...-.......+.+.+++.+.++||.+....+.. ......|.|+|.||..++.++|+.-..
T Consensus 365 ~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~ 443 (972)
T KOG0202|consen 365 EFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTR 443 (972)
T ss_pred ccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHHHcCCCcch
Confidence 11 000010000011223456889999999999988776554 333447999999999999999986433
Q ss_pred eCCc-EEEEE-eCC-eeEEEEEEEEeccCCCCceeEEEEEeCCC-CeEEEEecChhhhhhhhhcc-----C--------C
Q 001341 468 KNAS-ILEIK-FNG-SVLQYEILETLEFTSDRKRMSVVVKDCHS-GNISLLSKGADEAILPYAHA-----G--------Q 530 (1096)
Q Consensus 468 ~~~~-~~~~~-~~~-~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~~l~~KGa~~~il~~~~~-----~--------~ 530 (1096)
.... ...-+ .+. -.+.++..+++||+|+||+|||.+.++.+ ..+.+|+|||+|.|+++|+. + .
T Consensus 444 ~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~ 523 (972)
T KOG0202|consen 444 STNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQA 523 (972)
T ss_pred hhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHH
Confidence 1110 00000 000 12445667999999999999999997643 34899999999999999952 1 1
Q ss_pred chHHHHHHHHHHHhccceEEEEEEEecCH---HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCC
Q 001341 531 QTRTFVEAVEQYSQLGLRTLCLAWREVEE---DEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQ 607 (1096)
Q Consensus 531 ~~~~~~~~~~~~a~~GlR~l~~A~k~l~~---~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr 607 (1096)
.++.+.+...+|+.+|||||++|+++.+. ++...| +.. -+...|.||+|+|++||.||+|
T Consensus 524 ~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~---------~~s--------~~~~~E~~LtFvGlVGi~DPPR 586 (972)
T KOG0202|consen 524 SRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLN---------DTS--------NRATAESDLTFVGLVGILDPPR 586 (972)
T ss_pred HHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhc---------ccc--------cccccccceEEEEEeeccCCCc
Confidence 24678899999999999999999997663 111111 011 1346789999999999999999
Q ss_pred CChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEE
Q 001341 608 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 687 (1096)
Q Consensus 608 ~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 687 (1096)
++|+++|+.|++|||+|.|+|||+.+||.+||+++|+...+.+-.-..+.|.+.+++
T Consensus 587 ~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~l----------------------- 643 (972)
T KOG0202|consen 587 PEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDL----------------------- 643 (972)
T ss_pred hhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcC-----------------------
Confidence 999999999999999999999999999999999999987765311223333333322
Q ss_pred EEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchH
Q 001341 688 VVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 767 (1096)
Q Consensus 688 vi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~ 767 (1096)
.++..+ ....+..+|+|++|++|.+||++||+.|++|+|+|||+||+|+||.||||||| |..|+
T Consensus 644 ----------s~~~~~-----~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAM-G~~GT 707 (972)
T KOG0202|consen 644 ----------SDEELD-----DAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAM-GISGT 707 (972)
T ss_pred ----------CHHHHH-----HHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceee-cCCcc
Confidence 211111 01235789999999999999999999999999999999999999999999999 86677
Q ss_pred HHHh-hccccccccchhhhHH-HhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhcccc-chhhhhHHHHHHHhHhh
Q 001341 768 QAAR-AADYSIGKFRFLKRLI-LVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSG-TSLFNSVSLMAYNVFYT 844 (1096)
Q Consensus 768 ~a~~-~aD~vl~~f~~l~~ll-l~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g-~~~~~~~~ll~~n~~~~ 844 (1096)
++++ |||+||.|++|.+++- +.|||.+|+|+++++.|.+.-|+.-....++. ...| ..+++++|+||+|++++
T Consensus 708 dVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~----aa~~~p~pL~pvQiLWiNlvtD 783 (972)
T KOG0202|consen 708 DVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLT----AAFGIPEPLIPVQILWINLVTD 783 (972)
T ss_pred HhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHH----HHhCCCCcccchhhheeeeecc
Confidence 6665 9999999999999884 68999999999999999988877544333332 2233 35799999999999999
Q ss_pred hHhHhhhhccCCCChhhhhcCCccccccccCCccCchhHHHHHHHHHHHHHHHHHHhhhhccc--cccc-----------
Q 001341 845 SIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAY--EKSE----------- 911 (1096)
Q Consensus 845 ~lp~~~~~~~~d~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~----------- 911 (1096)
++|+.++++| |++.++|++||+ ..+..+++.+.+++++..|+|.++...+.....+.. +...
T Consensus 784 G~PA~aLG~e--p~D~DiM~kpPR---~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~ 858 (972)
T KOG0202|consen 784 GPPATALGFE--PVDPDIMKKPPR---DSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCC 858 (972)
T ss_pred CCchhhcCCC--CCChhHHhCCCC---CCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhc
Confidence 9999999998 599999999994 788889999999999988888876554443333321 1100
Q ss_pred ---------------ceehhhhhhHHHHHHHHhhhheeecch---hHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHH
Q 001341 912 ---------------MEEVSMVALSGCIWLQAFVVALETNSF---TVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMF 973 (1096)
Q Consensus 912 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 973 (1096)
..++.+.+++..-.++.++++.+..+. ..+.|.++.+++.+.++.++...|+|.++. .|
T Consensus 859 ~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~---iF 935 (972)
T KOG0202|consen 859 RDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQR---IF 935 (972)
T ss_pred ccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhh---hh
Confidence 013333444444444555666555442 356788888888899999999999998763 44
Q ss_pred Hhh-cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 001341 974 RLC-SQPSYWITMFLIVAAGMGPIVALKYFRYTYR 1007 (1096)
Q Consensus 974 ~~~-~~~~~w~~~~l~~~~~l~~~~~~k~~~~~~~ 1007 (1096)
++- .++..|+.++.+..-.++.+.++|++.|.+.
T Consensus 936 q~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 936 QTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred eecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 443 4899999999888889999999999998764
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-111 Score=1069.69 Aligned_cols=868 Identities=20% Similarity=0.228 Sum_probs=638.2
Q ss_pred ccccCCCCceeecCCC-ccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~i~~~~~d~~ 90 (1096)
+|+++||.|+++.++. ++| +.+++||.++++++++++++++++.. .+...+.++++++++++..++|+++
T Consensus 34 ~rl~~~G~N~l~~~~~~s~~----~~~l~q~~~~~~~iL~~aails~~~~-----~~~~~~iIl~vv~in~~i~~~QE~~ 104 (1053)
T TIGR01523 34 HRLKEVGENRLEADSGIDAK----AMLLHQVCNAMCMVLIIAAAISFAMH-----DWIEGGVISAIIALNILIGFIQEYK 104 (1053)
T ss_pred HHHHHcCCCCCCCCCCCCHH----HHHHHHHhCHHHHHHHHHHHHHHHHh-----hHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 5889999999999875 565 88999999999988888888887642 2223345556677888999999999
Q ss_pred Hhhh---hHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeeec
Q 001341 91 RYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLI 167 (1096)
Q Consensus 91 r~~~---~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~ 167 (1096)
+.++ ++++.+++++|+|||++++|+++||||||||.|++||+|||||+|+++++ +.||||+|||||.|+.|.+
T Consensus 105 aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K~~ 180 (1053)
T TIGR01523 105 AEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIKDA 180 (1053)
T ss_pred HHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceeccc
Confidence 8775 55667789999999999999999999999999999999999999998766 9999999999999999964
Q ss_pred cccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCcccc
Q 001341 168 PAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKL 247 (1096)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~ 247 (1096)
.... . .+.+....+..|++|+||.+.+| .+.|+|++||.+|.+
T Consensus 181 ~~~~------------------~------------------~~~~~~~~d~~n~lf~GT~V~~G-~g~~vVvatG~~T~~ 223 (1053)
T TIGR01523 181 HATF------------------G------------------KEEDTPIGDRINLAFSSSAVTKG-RAKGICIATALNSEI 223 (1053)
T ss_pred cccc------------------c------------------ccccCCcccCCCccccCceEEee-eEEEEEEEecCccHH
Confidence 2100 0 00011112568999999999998 699999999999999
Q ss_pred cccCCCC---C-----------------------------------CCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 001341 248 GMTRGIP---E-----------------------------------PKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNV 289 (1096)
Q Consensus 248 ~~~~~~~---~-----------------------------------~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 289 (1096)
|++.... . ...||+++.+++++.+++.+.+++++++++...
T Consensus 224 GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~- 302 (1053)
T TIGR01523 224 GAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK- 302 (1053)
T ss_pred HHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 9875411 0 013999999999999888777776665554321
Q ss_pred ccccccccccchHHHhHhHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEE
Q 001341 290 WKDTEARKEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEY 369 (1096)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~ 369 (1096)
+. .+...++.. +.+++++||++|++.++++..+.++ +|.+++ +++|+++++|+||++++
T Consensus 303 ~~--------~~~~~~~~a---v~l~Va~VPegLp~~vti~La~g~~------rMak~~----~lVr~L~avEtLG~vtv 361 (1053)
T TIGR01523 303 FD--------VDKEVAIYA---ICLAISIIPESLIAVLSITMAMGAA------NMSKRN----VIVRKLDALEALGAVND 361 (1053)
T ss_pred hh--------hhHHHHHHH---HHHHHHHcccchHHHHHHHHHHHHH------HHHhcC----CEeccchhhhhccCccE
Confidence 10 112333322 3477899999999777777766666 565554 89999999999999999
Q ss_pred EEecCCCCCCCCceEEEEEEEcCE-eecCCC---------ccC--C--------C-----chhhHHh----hh-----c-
Q 001341 370 ILTDKTGTLTENRMIFRRCCIGGI-FYGNET---------GDA--L--------K-----DVGLLNA----IT-----S- 414 (1096)
Q Consensus 370 I~~DKTGTLT~n~m~v~~~~~~~~-~y~~~~---------~~~--~--------~-----~~~~~~~----~~-----~- 414 (1096)
||+|||||||+|+|+|+++++++. .|.... ++. . . +.+.... .. .
T Consensus 362 ICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1053)
T TIGR01523 362 ICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPED 441 (1053)
T ss_pred EEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999998752 221100 000 0 0 0000000 00 0
Q ss_pred -CChhHHHHHHHHhhhceeecccCC-CCceeeecCCccHHHHHHHHHhcCeEEee---------eCC-cEEEEE---eCC
Q 001341 415 -GSPDVIRFLTVMAVCNTVIPAKSK-AGAILYKAQSQDEEALVHAAAQLHMVLVN---------KNA-SILEIK---FNG 479 (1096)
Q Consensus 415 -~~~~~~~~l~~l~lc~~~~~~~~~-~~~~~~~~~sp~e~Al~~~a~~~g~~~~~---------~~~-~~~~~~---~~~ 479 (1096)
.++...+++.+.++||++....++ ++. ....|||+|.||+++|.+.|+.... ..+ ....++ ..+
T Consensus 442 ~~~~~~~~ll~~~~lcn~a~~~~~~~~~~-~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (1053)
T TIGR01523 442 IDMDLFIKLLETAALANIATVFKDDATDC-WKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKP 520 (1053)
T ss_pred cccHHHHHHHHHHHhccCCeeeccCCCCc-eeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccc
Confidence 113456788999999987764322 221 1236899999999999998874210 000 000000 012
Q ss_pred eeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccC----C---------chHHHHHHHHHHHhcc
Q 001341 480 SVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG----Q---------QTRTFVEAVEQYSQLG 546 (1096)
Q Consensus 480 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~----~---------~~~~~~~~~~~~a~~G 546 (1096)
....|++++.+||||+|||||+++++++++++++|+|||||.|+++|+.. . ..+++.+++++|+++|
T Consensus 521 ~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G 600 (1053)
T TIGR01523 521 GSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEG 600 (1053)
T ss_pred cccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcC
Confidence 24568999999999999999999997544468999999999999999631 0 1356788899999999
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEE
Q 001341 547 LRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWM 626 (1096)
Q Consensus 547 lR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~m 626 (1096)
+|||++|||.++++++..+ .+.. ...+ .+.+|+||+|+|+++++||+|++++++|+.|+++||+|||
T Consensus 601 lRvLa~A~r~l~~~~~~~~--~~~~---~~~~--------~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~M 667 (1053)
T TIGR01523 601 LRVLAFASKSFDKADNNDD--QLKN---ETLN--------RATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHM 667 (1053)
T ss_pred CeEEEEEEEECCchhccch--hhhc---cccc--------hhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEE
Confidence 9999999999987654211 1100 0001 1357899999999999999999999999999999999999
Q ss_pred ECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHh
Q 001341 627 LTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFT 706 (1096)
Q Consensus 627 lTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~ 706 (1096)
+|||++.||.++|++|||..++.. ..+ .......+++|.+++.+.++.. .
T Consensus 668 iTGD~~~tA~~iA~~~Gi~~~~~~----~~~-----------------------~~~~~~~vitG~~l~~l~~~~l---~ 717 (1053)
T TIGR01523 668 LTGDFPETAKAIAQEVGIIPPNFI----HDR-----------------------DEIMDSMVMTGSQFDALSDEEV---D 717 (1053)
T ss_pred ECCCCHHHHHHHHHHcCCCCcccc----ccc-----------------------cccccceeeehHHhhhcCHHHH---H
Confidence 999999999999999999764311 000 0001236889988876644322 2
Q ss_pred hhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHH-HHhhccccccccchhhh
Q 001341 707 ELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ-AARAADYSIGKFRFLKR 785 (1096)
Q Consensus 707 ~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~-a~~~aD~vl~~f~~l~~ 785 (1096)
++ .....+|||++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| |..|++ |+++||+++.+++|-..
T Consensus 718 ~~--~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAm-g~~gt~vak~aADivl~dd~f~~I 794 (1053)
T TIGR01523 718 DL--KALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM-GINGSDVAKDASDIVLSDDNFASI 794 (1053)
T ss_pred HH--hhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEec-CCCccHHHHHhcCEEEecCCHHHH
Confidence 22 234679999999999999999999999999999999999999999999999 644544 55699999998666443
Q ss_pred H-HHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccch--hhhhHHHHHHHhHhhhHhHhhhhccCCCChhhh
Q 001341 786 L-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTS--LFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTV 862 (1096)
Q Consensus 786 l-ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~--~~~~~~ll~~n~~~~~lp~~~~~~~~d~~~~~~ 862 (1096)
. ++.|||++|+|+++++.|.+++|+...++.+++.++..++|.+ +++++|++|+|++++++|++++++| ++++++
T Consensus 795 ~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e--~~~~~~ 872 (1053)
T TIGR01523 795 LNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLE--KAAPDL 872 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccC--CCChhH
Confidence 3 3699999999999999999999999998888888887777763 6899999999999999999998887 589999
Q ss_pred hcCCccccccccCCccCchhHHHHHHHHHHHHHHHHHHhhhh-ccc--cc-------------cc---ceehhhhhhHHH
Q 001341 863 MQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHV-YAY--EK-------------SE---MEEVSMVALSGC 923 (1096)
Q Consensus 863 ~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~--~~-------------~~---~~~~~~~~~~~~ 923 (1096)
|++||+ .+...+++..+++.+++.+++.+++.+...+.. +.+ +. .. ..++.|.+++.+
T Consensus 873 m~~~Pr---~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~ 949 (1053)
T TIGR01523 873 MDRLPH---DNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFC 949 (1053)
T ss_pred HhcCCC---CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHH
Confidence 999995 456678898888778888888776554433221 110 00 00 123333444444
Q ss_pred HHHHHhhhheeecc-hh-----------------HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhhc-CHhHHHH
Q 001341 924 IWLQAFVVALETNS-FT-----------------VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWIT 984 (1096)
Q Consensus 924 ~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~ 984 (1096)
.+++.++++....+ |. .+.+..++.++++.+++++++.++|..+. .+|++.+ ++ .|+.
T Consensus 950 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~--~~f~~~~l~~-~w~~ 1026 (1053)
T TIGR01523 950 ALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVIND--DVFKHKPIGA-EWGL 1026 (1053)
T ss_pred HHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhh--hhhccCCcch-HHHH
Confidence 55555566554333 21 24567777777878888888888887641 1444433 44 6777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 001341 985 MFLIVAAGMGPIVALKYFRYTY 1006 (1096)
Q Consensus 985 ~~l~~~~~l~~~~~~k~~~~~~ 1006 (1096)
++.+.++.++...+.|++++++
T Consensus 1027 ~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 1027 AAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 7777777777778888887654
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-114 Score=981.84 Aligned_cols=830 Identities=21% Similarity=0.306 Sum_probs=624.0
Q ss_pred ccccCCCCceeecCCC-ccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccC----ccchhhHH---HHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN----PASTWGPL---IFIFAVSATK 83 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~----~~~~~~~l---~~i~~i~~i~ 83 (1096)
.|++.||+|.++.++. ++| .++||.|++..-++++++|++++..++.... |+.+..++ ++|++++++.
T Consensus 127 ~Rr~~fG~N~~p~k~~K~Fl----~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~n 202 (1034)
T KOG0204|consen 127 RRRKIFGSNTYPEKPPKGFL----RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVN 202 (1034)
T ss_pred HHHHhcCCCCCCCCCCccHH----HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecc
Confidence 4788999999999886 666 7799999999988888888888876654332 22222222 2334456665
Q ss_pred HHHHHHHHhhhhHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcE
Q 001341 84 EAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLK 163 (1096)
Q Consensus 84 ~~~~d~~r~~~~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~ 163 (1096)
++-++.+-.+.+++..+.++.|+|||+.++|+..||+||||+.|+.||.+||||+++++++ +.||||+|||||+++
T Consensus 203 Dy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd~v 278 (1034)
T KOG0204|consen 203 DYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESDHV 278 (1034)
T ss_pred hhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCcce
Confidence 4444444444456666789999999999999999999999999999999999999998877 999999999999999
Q ss_pred eeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecC
Q 001341 164 TRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGN 243 (1096)
Q Consensus 164 ~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~ 243 (1096)
.|.+ ..+-++++||++.+| .+.++|+.+|.
T Consensus 279 ~k~~-------------------------------------------------~~dPfLlSGTkv~eG-sgkMlVTaVGm 308 (1034)
T KOG0204|consen 279 QKSL-------------------------------------------------DKDPFLLSGTKVMEG-SGKMLVTAVGM 308 (1034)
T ss_pred eccC-------------------------------------------------CCCCeEeecceeecC-cceEEEEEeee
Confidence 9832 345699999999998 79999999999
Q ss_pred cccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccccccccccc-c--cch----HHHhHhHHHH
Q 001341 244 ETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTA--GNVWKDTEARK-E--FPW----YELLVIPLRF 311 (1096)
Q Consensus 244 ~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~-~--~~~----~~~~~~~~~~ 311 (1096)
+|..|++.. .....+||+|-++++++..+-.+.++++.+..++ .+++....... . ..| ...++.++..
T Consensus 309 nt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i 388 (1034)
T KOG0204|consen 309 NTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFII 388 (1034)
T ss_pred cchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhh
Confidence 999998654 3444679999999998876655554444333221 11111111000 0 112 2223322222
Q ss_pred H-HHhhcccchHHH--HHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEE
Q 001341 312 E-LLCSIMIPISIK--VSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRC 388 (1096)
Q Consensus 312 ~-~l~~~~iP~~L~--vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~ 388 (1096)
. .+++.++|++|| ||+++|+.+. +|.+++ .++|.+++||++|..+.||+|||||||.|+|+|.+.
T Consensus 389 ~VTilVVAVPEGLPLAVTLsLAys~k--------kMmkD~----~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~ 456 (1034)
T KOG0204|consen 389 AVTILVVAVPEGLPLAVTLSLAYSMK--------KMMKDN----NLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQS 456 (1034)
T ss_pred eeEEEEEECCCCccHHHHHHHHHHHH--------HHhcch----hHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEee
Confidence 2 267889999985 7777777776 566665 789999999999999999999999999999999999
Q ss_pred EEcCEeecCCCccCCCchhhHHhhhcCChhHHH-HHHHHhhhceeecccCC-CCceeeecCCccHHHHHHHHHhcCeEEe
Q 001341 389 CIGGIFYGNETGDALKDVGLLNAITSGSPDVIR-FLTVMAVCNTVIPAKSK-AGAILYKAQSQDEEALVHAAAQLHMVLV 466 (1096)
Q Consensus 389 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~l~lc~~~~~~~~~-~~~~~~~~~sp~e~Al~~~a~~~g~~~~ 466 (1096)
|+++..|..+..+. ..-++.+.+ ++.+++...+.....++ .|.-....|||+|.||+.++.++|..+
T Consensus 457 ~~~~~~~k~~~~~~----------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~- 525 (1034)
T KOG0204|consen 457 YIGSEHYKVNSPKS----------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDF- 525 (1034)
T ss_pred eeccccccccCccc----------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcch-
Confidence 99998886433221 112233333 34455554443333333 333445689999999999999999876
Q ss_pred eeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhcc------------CCchHH
Q 001341 467 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA------------GQQTRT 534 (1096)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~------------~~~~~~ 534 (1096)
+..+.+.++.+++||+|+||||+++++.++++.| +|+|||.|.++.+|.. ++....
T Consensus 526 -----------~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~ 593 (1034)
T KOG0204|consen 526 -----------QDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKS 593 (1034)
T ss_pred -----------HhhcchhheeEEeccCcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHH
Confidence 4445677899999999999999999998855555 9999999999999973 112346
Q ss_pred HHHHHHHHHhccceEEEEEEEecCHH--HHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHH
Q 001341 535 FVEAVEQYSQLGLRTLCLAWREVEED--EYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPE 612 (1096)
Q Consensus 535 ~~~~~~~~a~~GlR~l~~A~k~l~~~--~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~ 612 (1096)
+++.++.||++||||+|+|||+.... +..+|.. .+..+.+|+++|++||+||.||||++
T Consensus 594 ~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~-------------------~~~~~~~lt~laivGIkDPvRPgV~~ 654 (1034)
T KOG0204|consen 594 FKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN-------------------EELPEGGLTLLAIVGIKDPVRPGVPE 654 (1034)
T ss_pred HHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc-------------------cccCCCCeEEEEEeeccCCCCCCcHH
Confidence 88999999999999999999995433 1112211 13467899999999999999999999
Q ss_pred HHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcCh
Q 001341 613 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 692 (1096)
Q Consensus 613 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 692 (1096)
+|+.|++|||+|.|+||||..||++||.+|||+.++.+ ...++|.+..++.
T Consensus 655 AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d--~~~lEG~eFr~~s--------------------------- 705 (1034)
T KOG0204|consen 655 AVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD--FLALEGKEFRELS--------------------------- 705 (1034)
T ss_pred HHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc--cceecchhhhhcC---------------------------
Confidence 99999999999999999999999999999999999875 4555655544332
Q ss_pred hHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHh-
Q 001341 693 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR- 771 (1096)
Q Consensus 693 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~- 771 (1096)
++.++ ....+-.+.+|.+|.+|..+|+.+++.|++|+++|||.||+|||++||||.|| |-+|+++++
T Consensus 706 ------~ee~~-----~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAM-GIaGTeVAKE 773 (1034)
T KOG0204|consen 706 ------QEERD-----KIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAM-GIAGTEVAKE 773 (1034)
T ss_pred ------HHHHH-----hhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhc-cccchhhhhh
Confidence 11111 12345689999999999999999999999999999999999999999999999 877777665
Q ss_pred hccccccccchhhhH-HHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhh
Q 001341 772 AADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLV 850 (1096)
Q Consensus 772 ~aD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~ 850 (1096)
+||++|+|+||.++. .+.|||..|++++|+++|.+.-|++..++.|.-+. .+|.+|++++||||.|++||.|.+++
T Consensus 774 aSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~---~~~dsPLtAVQlLWVNLIMDTLgALA 850 (1034)
T KOG0204|consen 774 ASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSAC---ATGDSPLTAVQLLWVNLIMDTLGALA 850 (1034)
T ss_pred hCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhh---hcCCccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998877 47899999999999999999999876655555443 46678999999999999999999999
Q ss_pred hhccCCCChhhhhcCCccccccccCCccCchhHHHHHHHHHHHHHHHHHHhhhhcc----cccc-----cceehhhhhhH
Q 001341 851 STIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYA----YEKS-----EMEEVSMVALS 921 (1096)
Q Consensus 851 ~~~~~d~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~~-----~~~~~~~~~~~ 921 (1096)
++.|+ |.+.+|++|| +||+..+++..||.+.+++++||-+++|.+.|..-. +... ...|+-|.+|+
T Consensus 851 LATep--Pt~~Lm~RkP---~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV 925 (1034)
T KOG0204|consen 851 LATEP--PTDELMKRKP---VGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFV 925 (1034)
T ss_pred hccCC--CChHHhcCCC---CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHH
Confidence 99985 7777999999 699999999999999999999999999988764432 1111 12344455555
Q ss_pred HHHHHHHhhhheeecchhHH----HHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhh-cCHhHHHHHHHHHHHHHHHH
Q 001341 922 GCIWLQAFVVALETNSFTVF----QHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLC-SQPSYWITMFLIVAAGMGPI 996 (1096)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~~l~~~~~l~~~ 996 (1096)
.|.+++-++.+.. +..++| ++..+...+.+.++++.+...+ .+. ++..- .++..|++++++.+++++.-
T Consensus 926 ~~qvFNEinaRki-~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF--~g~---~~st~~L~~~qWl~ci~~g~~sl~~g 999 (1034)
T KOG0204|consen 926 FCQVFNEINARKI-DERNVFKGIFRNRLFCVIITITVVSQVIIVEF--GGA---FFSTTPLSLTQWLWCIFIGVLSLPWG 999 (1034)
T ss_pred HHHHHHHHhhcch-hHHhHHHHHhcCceEEEEeeeeeehhhhhhhh--cCc---ceeeecccHHHHHHHHHHHHHHHHHH
Confidence 5555555555432 233333 3333444444555555544332 221 22222 28999999999999999888
Q ss_pred HHHHHHHHHhCC
Q 001341 997 VALKYFRYTYRA 1008 (1096)
Q Consensus 997 ~~~k~~~~~~~p 1008 (1096)
.+.|.+...+.|
T Consensus 1000 ~~ik~iP~~~~~ 1011 (1034)
T KOG0204|consen 1000 QLLKCIPVSSLP 1011 (1034)
T ss_pred HHheeccccccc
Confidence 888876544433
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-109 Score=1056.39 Aligned_cols=867 Identities=19% Similarity=0.235 Sum_probs=643.1
Q ss_pred ccccCCCCceeecCCCc-cchhhhHHHHHHHHHHHHHHHHHHHHHHhhccc-cc-------cCccchhhHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLI-TP-------VNPASTWGPLIFIFAVSAT 82 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~~-~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~-~~-------~~~~~~~~~l~~i~~i~~i 82 (1096)
+|+++||+|+++.++.+ +| +.+++||.+++++.++++++++++... .. .+.+...++++++++++++
T Consensus 44 ~rl~~~G~N~l~~~~~~~~~----~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 119 (997)
T TIGR01106 44 EILARDGPNALTPPPTTPEW----VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGC 119 (997)
T ss_pred HHHHHhCCCCCCCCCCCCHH----HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHH
Confidence 58899999999887654 55 889999999999988888888665321 10 0122233567777888999
Q ss_pred HHHHHHHHHhhhhHhhc---ceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCC
Q 001341 83 KEAWDDYNRYLSDKKAN---EKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1096)
Q Consensus 83 ~~~~~d~~r~~~~~~~n---~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGE 159 (1096)
+++++++|+++++++++ +.+++|+|||++++|+++||+|||+|.|++||.|||||+|+++++ |.||||+||||
T Consensus 120 i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LTGE 195 (997)
T TIGR01106 120 FSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLTGE 195 (997)
T ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccCCC
Confidence 99999999988766554 569999999999999999999999999999999999999997654 89999999999
Q ss_pred CCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEE
Q 001341 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (1096)
Q Consensus 160 s~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv 239 (1096)
|.|+.|.+.. ....|++..|++|+||.+.+| ++.|+|+
T Consensus 196 S~pv~K~~~~-----------------------------------------~~~~~~~~~n~l~~Gt~v~~G-~~~~~V~ 233 (997)
T TIGR01106 196 SEPQTRSPEF-----------------------------------------THENPLETRNIAFFSTNCVEG-TARGIVV 233 (997)
T ss_pred CCceeccCCC-----------------------------------------cccCccccCCeEEeccEeeee-eEEEEEE
Confidence 9999996421 112245778999999999998 7999999
Q ss_pred EecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhh
Q 001341 240 YTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCS 316 (1096)
Q Consensus 240 ~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 316 (1096)
+||.+|++|++.+ ..+.+++|+++.+++++..+..+.+++++++++++... ...|...+..++ .+++
T Consensus 234 ~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i---~v~v 303 (997)
T TIGR01106 234 NTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL-------GYTWLEAVIFLI---GIIV 303 (997)
T ss_pred EccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCHHHHHHHHH---HHHh
Confidence 9999999999876 44566799999999999887777666665544443211 124555444333 3667
Q ss_pred cccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeec
Q 001341 317 IMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG 396 (1096)
Q Consensus 317 ~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~ 396 (1096)
.++|++|+++++++...++. +|.+. ++++|+++++|+||++++||||||||||+|+|+|+++++++..|.
T Consensus 304 ~~iP~~L~~~v~i~l~~~~~------~m~~~----~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~ 373 (997)
T TIGR01106 304 ANVPEGLLATVTVCLTLTAK------RMARK----NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHE 373 (997)
T ss_pred hcCCccchHHHHHHHHHHHH------HHHHC----CcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEe
Confidence 78999999888888877766 44333 489999999999999999999999999999999999999987775
Q ss_pred CCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCc---eeeecCCccHHHHHHHHHhcCeEEeeeCCcEE
Q 001341 397 NETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLHMVLVNKNASIL 473 (1096)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~---~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~ 473 (1096)
.+....... . ......+....++.++++||++....+.++. -.+..|||+|.||++++.+.+...
T Consensus 374 ~~~~~~~~~-~---~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~-------- 441 (997)
T TIGR01106 374 ADTTEDQSG-V---SFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV-------- 441 (997)
T ss_pred cCCccCCCC-c---cCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH--------
Confidence 432111000 0 0011123345688899999987764332221 124468999999999998654311
Q ss_pred EEEeCCeeEEEEEEEEeccCCCCceeEEEEEeC--CCCeEEEEecChhhhhhhhhcc----CC-------chHHHHHHHH
Q 001341 474 EIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC--HSGNISLLSKGADEAILPYAHA----GQ-------QTRTFVEAVE 540 (1096)
Q Consensus 474 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~--~~~~~~l~~KGa~~~il~~~~~----~~-------~~~~~~~~~~ 540 (1096)
.+.+..|++++.+||+|+||||+++++.. +++++++|+|||||.|+++|+. ++ ..+.+.++++
T Consensus 442 ----~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~ 517 (997)
T TIGR01106 442 ----MEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYL 517 (997)
T ss_pred ----HHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHH
Confidence 12345678899999999999999988642 2357899999999999999962 11 1345788899
Q ss_pred HHHhccceEEEEEEEecCHHHHHH-HHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHH
Q 001341 541 QYSQLGLRTLCLAWREVEEDEYQE-WSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 619 (1096)
Q Consensus 541 ~~a~~GlR~l~~A~k~l~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~ 619 (1096)
+++++|+|||++|||.++++++.+ |... ++ ..+..|+||+|+|+++++||+|++++++|++|++
T Consensus 518 ~~a~~GlRvla~A~k~l~~~~~~~~~~~~----------~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~ 582 (997)
T TIGR01106 518 ELGGLGERVLGFCHLYLPDEQFPEGFQFD----------TD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRS 582 (997)
T ss_pred HHHhcCCEEEEEEEeecCccccccccccc----------ch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHH
Confidence 999999999999999998765432 1100 00 0123489999999999999999999999999999
Q ss_pred cCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHH
Q 001341 620 AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK 699 (1096)
Q Consensus 620 aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~ 699 (1096)
+||+++|+|||++.||.++|+++|+++++.. ..+++.+.+....+. ........++++|.+++.+.+
T Consensus 583 ~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~---------~~~~i~~~~~~~~~~----~~~~~~~~~vi~G~~l~~l~~ 649 (997)
T TIGR01106 583 AGIKVIMVTGDHPITAKAIAKGVGIISEGNE---------TVEDIAARLNIPVSQ----VNPRDAKACVVHGSDLKDMTS 649 (997)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCCCCCcc---------chhhhhhhccccccc----cccccccceEEEhHHhhhCCH
Confidence 9999999999999999999999999876532 011111111100000 011122357999999987654
Q ss_pred HHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHH-hhcccccc
Q 001341 700 HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA-RAADYSIG 778 (1096)
Q Consensus 700 ~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~-~~aD~vl~ 778 (1096)
+ .+.++...+...+|||++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| |..|++++ ++||++|.
T Consensus 650 ~---el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam-g~~G~~vak~aADivL~ 725 (997)
T TIGR01106 650 E---QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GIAGSDVSKQAADMILL 725 (997)
T ss_pred H---HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec-CCcccHHHHHhhceEEe
Confidence 3 3333333344579999999999999999999999999999999999999999999999 76666644 59999999
Q ss_pred ccchhhhH-HHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhccCCC
Q 001341 779 KFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDL 857 (1096)
Q Consensus 779 ~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~d~ 857 (1096)
+++|.... .+.|||++|.|+++++.|.+++|+...++.+++.++.. ..+++++|++|+|+++|++|++++++| +
T Consensus 726 dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~---~~pl~~~qlL~inli~d~lp~~al~~e--~ 800 (997)
T TIGR01106 726 DDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI---PLPLGTITILCIDLGTDMVPAISLAYE--K 800 (997)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC---cchhHHHHHHHHHHHHHHHHHHHHhcC--C
Confidence 86665444 36999999999999999999999998888888876543 357899999999999999999998887 4
Q ss_pred ChhhhhcCCccccccccCCccCchhHHHHHH-HHHHHHHHHHHHhhhhcc---------ccc--------------c---
Q 001341 858 SEGTVMQHPQILFYCQAGRLLNPSTFAGWFG-RSLFHAIVAFVISIHVYA---------YEK--------------S--- 910 (1096)
Q Consensus 858 ~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~---------~~~--------------~--- 910 (1096)
+++.+|++||+ ..+.+.+++..+++.+++ .+++++++.++..+..+. +.. .
T Consensus 801 ~~~~~m~~~P~--~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (997)
T TIGR01106 801 AESDIMKRQPR--NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQ 878 (997)
T ss_pred CCcccccCCCc--CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccccccccccccccccc
Confidence 88889998885 234668888888877665 577887766554432210 000 0
Q ss_pred ------------cceehhhhhhHHHHHHHHhhhheeecc-hh-HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhh
Q 001341 911 ------------EMEEVSMVALSGCIWLQAFVVALETNS-FT-VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLC 976 (1096)
Q Consensus 911 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 976 (1096)
...++.|..++.+.+++.++++....+ |. .+.+..++.++++.++++.+..++|.++ .++++.
T Consensus 879 ~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~---~~f~~~ 955 (997)
T TIGR01106 879 EWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMG---VALRMY 955 (997)
T ss_pred ccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhH---HHhccc
Confidence 012233333444444455566664333 21 1455666666666666666667777554 345443
Q ss_pred c-CHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001341 977 S-QPSYWITMFLIVAAGMGPIVALKYFRYTY 1006 (1096)
Q Consensus 977 ~-~~~~w~~~~l~~~~~l~~~~~~k~~~~~~ 1006 (1096)
+ ++.+|+.++.+.++.++...+.|++++.+
T Consensus 956 ~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 956 PLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3 78889988888888888788888887654
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-107 Score=1029.37 Aligned_cols=845 Identities=21% Similarity=0.270 Sum_probs=624.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccc--Cccchh---hHHHHHHHHHHHHHHHHHHHHhhhh---HhhcceEEEEEEC
Q 001341 37 LWEQFSRFMNQYFLLIACLQLWSLITPV--NPASTW---GPLIFIFAVSATKEAWDDYNRYLSD---KKANEKEVWVVKQ 108 (1096)
Q Consensus 37 l~~qf~~~~n~~~l~~~~l~~~~~~~~~--~~~~~~---~~l~~i~~i~~i~~~~~d~~r~~~~---~~~n~~~~~V~r~ 108 (1096)
+++||+++++++++++++++++....+. .+...| +.++++++++++..+++++++.++. +++.+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 4789999999999999999998754321 111222 3444566678888999999987754 4456789999999
Q ss_pred CeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeeeccccccCCCHhhhccceeEEEc
Q 001341 109 GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIEC 188 (1096)
Q Consensus 109 g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~ 188 (1096)
|++++|+++||||||||.|++||.|||||+|+++++ |.||||+|||||.|+.|.+...
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~------------------ 138 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESV------------------ 138 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCccccccccc------------------
Confidence 999999999999999999999999999999997765 9999999999999999964210
Q ss_pred cCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCcccccccC---CCCCCCcCHHHHHH
Q 001341 189 PGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR---GIPEPKLTAVDAMI 265 (1096)
Q Consensus 189 ~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~---~~~~~k~s~l~~~~ 265 (1096)
| +++..+.+.+|++|+||.+.+| ++.++|++||.+|++|++. ...+.+++|+++.+
T Consensus 139 --~------------------~~~~~~~~~~n~l~~GT~v~~G-~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l 197 (917)
T TIGR01116 139 --P------------------DERAVNQDKKNMLFSGTLVVAG-KARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKL 197 (917)
T ss_pred --C------------------ccccCcccccceeeeCCEEecc-eEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHH
Confidence 0 1111233678999999999998 7999999999999999854 35566789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHH-HHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccC
Q 001341 266 DKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPL-RFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEM 344 (1096)
Q Consensus 266 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m 344 (1096)
++++..++.+.++++++.++++..+.. .......|...+...+ ..+.+++.++|++|+++++++...+++. |
T Consensus 198 ~~~~~~l~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~------m 270 (917)
T TIGR01116 198 DEFGELLSKVIGLICILVWVINIGHFN-DPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRK------M 270 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-cccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHH------H
Confidence 999888877666665554443211110 0000123333222222 2234778899999999998888888774 4
Q ss_pred CCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEee------cCCCccCCCchhhHHh---h-hc
Q 001341 345 IDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY------GNETGDALKDVGLLNA---I-TS 414 (1096)
Q Consensus 345 ~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y------~~~~~~~~~~~~~~~~---~-~~ 414 (1096)
.++ ++++|+++++|+||++++||||||||||+|+|+|++++..+..+ ...........+.... . ..
T Consensus 271 ~~~----~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (917)
T TIGR01116 271 AKK----NAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGG 346 (917)
T ss_pred HHC----CcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCccccc
Confidence 333 38899999999999999999999999999999999998865321 1000000000000000 0 00
Q ss_pred CChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCC----eeEEEEEEEEe
Q 001341 415 GSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNG----SVLQYEILETL 490 (1096)
Q Consensus 415 ~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~----~~~~~~il~~~ 490 (1096)
.++...+++.++++||++....++++......|||+|.||++++.+.|+....+..+.......+ ....|++++.+
T Consensus 347 ~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (917)
T TIGR01116 347 QDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATL 426 (917)
T ss_pred chHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeec
Confidence 12345678889999999876543222111125899999999999999886654433332222222 23568899999
Q ss_pred ccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhcc-----CC-------chHHHHHHHHHHHh-ccceEEEEEEEec
Q 001341 491 EFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ-------QTRTFVEAVEQYSQ-LGLRTLCLAWREV 557 (1096)
Q Consensus 491 ~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~-----~~-------~~~~~~~~~~~~a~-~GlR~l~~A~k~l 557 (1096)
||||+|||||++++. ++++.+|+|||||.|+++|+. +. ..+++.+++++|++ +|+|||++|||.+
T Consensus 427 pF~s~rK~msviv~~--~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~ 504 (917)
T TIGR01116 427 EFSRDRKSMSVLCKP--STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDI 504 (917)
T ss_pred ccChhhCeEEEEEee--CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEEC
Confidence 999999999999986 467899999999999999963 11 13457888999999 9999999999999
Q ss_pred CHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHH
Q 001341 558 EEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQ 637 (1096)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ 637 (1096)
++++.. +. ..+ .+..+.+|+||+|+|+++++||+|++++++|+.|+++||++||+|||+.+||.+
T Consensus 505 ~~~~~~-~~---------~~~-----~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ 569 (917)
T TIGR01116 505 PDPREE-DL---------LSD-----PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEA 569 (917)
T ss_pred Cccccc-cc---------ccc-----chhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHH
Confidence 764321 10 001 012356899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEE
Q 001341 638 IALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAIC 717 (1096)
Q Consensus 638 ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~ 717 (1096)
+|+++|+..++.+ +. ...++|..++.+.++ +. ....++..+|
T Consensus 570 ia~~~gi~~~~~~--v~-------------------------------~~~~~g~~l~~~~~~---~~--~~~~~~~~v~ 611 (917)
T TIGR01116 570 ICRRIGIFSPDED--VT-------------------------------FKSFTGREFDEMGPA---KQ--RAACRSAVLF 611 (917)
T ss_pred HHHHcCCCCCCcc--cc-------------------------------ceeeeHHHHhhCCHH---HH--HHhhhcCeEE
Confidence 9999999865432 10 113344444332211 11 1123567899
Q ss_pred EeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccc--cchhhhHHHhhchhhh
Q 001341 718 CRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK--FRFLKRLILVHGRYSY 795 (1096)
Q Consensus 718 ~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~--f~~l~~lll~~GR~~~ 795 (1096)
||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||+| |++.+.++++||+++.+ |+.+..+ +.|||++|
T Consensus 612 ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~-g~g~~~ak~aAD~vl~dd~f~~i~~~-i~~GR~~~ 689 (917)
T TIGR01116 612 SRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM-GSGTEVAKEASDMVLADDNFATIVAA-VEEGRAIY 689 (917)
T ss_pred EecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEEC-CCCcHHHHHhcCeEEccCCHHHHHHH-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999 54434455699999998 4445555 59999999
Q ss_pred hhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhccCCCChhhhhcCCccccccccC
Q 001341 796 NRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAG 875 (1096)
Q Consensus 796 ~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~d~~~~~~~~~p~~y~~~~~~ 875 (1096)
+|+++++.|.+++|+...++.+++.++.. ..+|+++|++|+|++++++|++++++|+ +++.+|++||+ .+.+
T Consensus 690 ~ni~k~i~~~l~~ni~~~~~~~~~~~~~~---~~pl~~~qll~inli~d~lp~~~l~~~~--~~~~~m~~pP~---~~~~ 761 (917)
T TIGR01116 690 NNMKQFIRYMISSNIGEVVCIFLTAALGI---PEGLIPVQLLWVNLVTDGLPATALGFNP--PDKDIMWKPPR---RPDE 761 (917)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHcC---CchHHHHHHHHHHHHHHHHHHHHHhcCC--cchhHhcCCCC---CCCC
Confidence 99999999999999998888888776422 3579999999999999999999888874 77889999994 5678
Q ss_pred CccCchhHHHHHHHHHHHHHHHHHHhhhhc---ccc-----------------------cccceehhhhhhHHHHHHHHh
Q 001341 876 RLLNPSTFAGWFGRSLFHAIVAFVISIHVY---AYE-----------------------KSEMEEVSMVALSGCIWLQAF 929 (1096)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~-----------------------~~~~~~~~~~~~~~~~~~~~~ 929 (1096)
+++++++++.|++.|++++++.++..++.+ .+. .....++.|.+++.+.+++.+
T Consensus 762 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~ 841 (917)
T TIGR01116 762 PLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNAL 841 (917)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHH
Confidence 899999999999999999977543322211 110 001124445555566666677
Q ss_pred hhheeecc-hh--HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhh-cCHhHHHHHHHHHHHHHHHHHHHHHHH
Q 001341 930 VVALETNS-FT--VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLC-SQPSYWITMFLIVAAGMGPIVALKYFR 1003 (1096)
Q Consensus 930 ~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~~l~~~~~l~~~~~~k~~~ 1003 (1096)
+++...++ |. .+.+..+|.++++.+++++++.++|.++ .++++. .++..|+.++.+.++.++...+.|+++
T Consensus 842 ~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~---~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 842 NALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLS---RIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred HHcCCcccccccCCccCHHHHHHHHHHHHHHHHHHHhHHHH---HHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77775544 22 2456777777777777787777888655 345553 388999988888777777778888765
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-107 Score=1029.25 Aligned_cols=817 Identities=21% Similarity=0.287 Sum_probs=597.7
Q ss_pred ccccCCCCceeecCCC-ccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccc-----cccCccchhh---HHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLI-----TPVNPASTWG---PLIFIFAVSAT 82 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~-----~~~~~~~~~~---~l~~i~~i~~i 82 (1096)
+|+++||+|+++.++. ++| +.+++||+++++++++++++++++... .+.++...|. .++++++++.+
T Consensus 68 ~r~~~yG~N~l~~~~~~s~~----~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~ 143 (941)
T TIGR01517 68 RREKVYGKNELPEKPPKSFL----QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVL 143 (941)
T ss_pred HHHHHhCCCCCCCCCCCCHH----HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhH
Confidence 5888999999999877 455 789999999999999999999887432 1122222331 22223333444
Q ss_pred HHHHHHHHHhhh----hHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCC
Q 001341 83 KEAWDDYNRYLS----DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDG 158 (1096)
Q Consensus 83 ~~~~~d~~r~~~----~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtG 158 (1096)
..+++++++.++ ++..++.+++|+|||++++|+++||+|||||.|++||.|||||+|++++ .+.||||+|||
T Consensus 144 i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~LTG 219 (941)
T TIGR01517 144 VTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESSITG 219 (941)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEecccCC
Confidence 455566655443 3334577999999999999999999999999999999999999999654 49999999999
Q ss_pred CCCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEE
Q 001341 159 ETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238 (1096)
Q Consensus 159 Es~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvV 238 (1096)
||.|+.|.+ +..|++|+||.+.+| .+.++|
T Consensus 220 ES~pv~K~~-------------------------------------------------~~~n~v~~GT~v~~G-~~~~iV 249 (941)
T TIGR01517 220 ESDPIKKGA-------------------------------------------------PKDSFLLSGTVVNEG-SGRMLV 249 (941)
T ss_pred CCCcccccC-------------------------------------------------CCCceEEeCCeEEee-EEEEEE
Confidence 999999953 245799999999998 799999
Q ss_pred EEecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cccccccc------cccchHHHhH
Q 001341 239 VYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGN---VWKDTEAR------KEFPWYELLV 306 (1096)
Q Consensus 239 v~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~------~~~~~~~~~~ 306 (1096)
++||.+|.+|++.. ..+ +++|+++.++++...+..+.++++++.++++. .+...... ...+|...+
T Consensus 250 ~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 327 (941)
T TIGR01517 250 TAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHF- 327 (941)
T ss_pred EEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHH-
Confidence 99999999998644 223 45799999999888776665554444333221 11100000 001233333
Q ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEE
Q 001341 307 IPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFR 386 (1096)
Q Consensus 307 ~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~ 386 (1096)
..++.++++++|++|++.+.++...... +|.+.+ +++|+++++|+||++++||||||||||+|+|+|+
T Consensus 328 --~~al~llv~~iP~~Lp~~vti~l~~~~~------~mak~~----ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~ 395 (941)
T TIGR01517 328 --IIAVTIVVVAVPEGLPLAVTIALAYSMK------KMMKDN----NLVRHLAACETMGSATAICSDKTGTLTQNVMSVV 395 (941)
T ss_pred --HHHHHHHHhhCCCchHHHHHHHHHHHHH------HHHhCC----CEEechHHhhhccCceEEEEcCcCceeeceEEEE
Confidence 3334478889999887555444444433 565443 8899999999999999999999999999999999
Q ss_pred EEEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEe
Q 001341 387 RCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV 466 (1096)
Q Consensus 387 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~ 466 (1096)
+++.++..+..++. .. ..++...+++...++||+..+...++....+..+||+|.|+++++++.|...
T Consensus 396 ~~~~~~~~~~~~~~--------~~---~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~- 463 (941)
T TIGR01517 396 QGYIGEQRFNVRDV--------LR---NVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDY- 463 (941)
T ss_pred EEEEecceEecCcc--------cc---cCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCH-
Confidence 99887654432210 00 0112344555556666655443211111124579999999999998876432
Q ss_pred eeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhcc-----CC------chHHH
Q 001341 467 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ------QTRTF 535 (1096)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~-----~~------~~~~~ 535 (1096)
...+..|++++.+||+|+||||+++++.+ ++++++|+|||||.|+++|+. +. ..+++
T Consensus 464 -----------~~~~~~~~~~~~~pF~s~~k~msvv~~~~-~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i 531 (941)
T TIGR01517 464 -----------QEVRAEEKVVKIYPFNSERKFMSVVVKHS-GGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRC 531 (941)
T ss_pred -----------HHHHhhchhccccccCCCCCeEEEEEEeC-CCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHH
Confidence 11123567788999999999999999975 567899999999999999963 11 13467
Q ss_pred HHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHH
Q 001341 536 VEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIE 615 (1096)
Q Consensus 536 ~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~ 615 (1096)
.+.+++++++|+||+++|||.++.+++..| +..|+||+|+|+++++||+|++++++|+
T Consensus 532 ~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~ 589 (941)
T TIGR01517 532 ADVIEPLASDALRTICLAYRDFAPEEFPRK----------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQ 589 (941)
T ss_pred HHHHHHHHhcCCEEEEEEEEecCccccccc----------------------cccccCcEEEEEeeccCCCchhHHHHHH
Confidence 888999999999999999999876543221 2347899999999999999999999999
Q ss_pred HHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHH
Q 001341 616 TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALE 695 (1096)
Q Consensus 616 ~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 695 (1096)
.|+++||++||+|||++.||.++|++|||.+++.. +++|++++
T Consensus 590 ~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~-------------------------------------vi~G~~~~ 632 (941)
T TIGR01517 590 ECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGL-------------------------------------AMEGKEFR 632 (941)
T ss_pred HHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCce-------------------------------------EeeHHHhh
Confidence 99999999999999999999999999999765432 34444444
Q ss_pred HHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHH-HHhhcc
Q 001341 696 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ-AARAAD 774 (1096)
Q Consensus 696 ~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~-a~~~aD 774 (1096)
.+.++ ++.++ ..+..+|||++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| |.+|++ |+++||
T Consensus 633 ~l~~~---el~~~--i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAm-g~~gtdvAk~aAD 706 (941)
T TIGR01517 633 RLVYE---EMDPI--LPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM-GISGTEVAKEASD 706 (941)
T ss_pred hCCHH---HHHHH--hccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceec-CCCccHHHHHhCC
Confidence 33221 11111 235689999999999999999999999999999999999999999999999 644555 455999
Q ss_pred ccccccchhhhH-HHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhc
Q 001341 775 YSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI 853 (1096)
Q Consensus 775 ~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~ 853 (1096)
++|.++++-... ++.|||++|+|+++.+.|.+++|+...++.+++.++. +..+++++|++|+|++++++|++++.+
T Consensus 707 ivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~---~~~pl~~~qil~inl~~d~~~al~l~~ 783 (941)
T TIGR01517 707 IILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCIS---STSPLTAVQLLWVNLIMDTLAALALAT 783 (941)
T ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccHHHHHHHHHHHHHHHhhHHHHcc
Confidence 999976664433 3599999999999999999999998877777766654 346899999999999999999998888
Q ss_pred cCCCChhhhhcCCccccccccCCccCchhHHHHHHHHHHHHHHHHHHhhhhccc---cc---------ccceehhhhhhH
Q 001341 854 DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAY---EK---------SEMEEVSMVALS 921 (1096)
Q Consensus 854 ~~d~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~---------~~~~~~~~~~~~ 921 (1096)
| ++++++|++||+ .+..+++++.++..+++.+++++++.+++.+....+ .. ...+++.|.++.
T Consensus 784 e--~~~~~lm~~~P~---~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v 858 (941)
T TIGR01517 784 E--PPTEALLDRKPI---GRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFV 858 (941)
T ss_pred C--CccHHHHhCCCC---CCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHH
Confidence 7 588999999995 456678899999999999999998877665432211 11 111233444444
Q ss_pred HHHHHHHhhhheeec--ch-hHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhhc-CHhHHHHHHHHHHHHHHHHH
Q 001341 922 GCIWLQAFVVALETN--SF-TVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIV 997 (1096)
Q Consensus 922 ~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~l~~~~~l~~~~ 997 (1096)
.+.+++.++++.... .| .++++..++..+++.+++++++.. .. +.++++.+ ++..|+.++++.++.++...
T Consensus 859 ~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~--~~---~~~f~~~~l~~~~w~~~~~~~~~~~~~~~ 933 (941)
T TIGR01517 859 LLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVE--FG---GSFFSTVSLSIEQWIGCVLLGMLSLIFGV 933 (941)
T ss_pred HHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHH--HH---HHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 555555666665432 12 235566666666666666544332 22 24455543 78899888887777777777
Q ss_pred HHHHH
Q 001341 998 ALKYF 1002 (1096)
Q Consensus 998 ~~k~~ 1002 (1096)
+.|++
T Consensus 934 ~~~~~ 938 (941)
T TIGR01517 934 LLRLI 938 (941)
T ss_pred HHHhc
Confidence 77765
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-103 Score=990.96 Aligned_cols=817 Identities=20% Similarity=0.252 Sum_probs=621.1
Q ss_pred ccccCCCCceeecCCC-ccchhhhHHHHHHH-HHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQF-SRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDY 89 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~fl~~~l~~qf-~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~i~~~~~d~ 89 (1096)
+|+++||+|+++.++. ++| +.+++|| .+|++++++++++++++.. .+..+ +.++++++++++.++++++
T Consensus 32 ~r~~~~G~N~i~~~~~~s~~----~~~l~~~~~~~~~~~L~~aa~ls~~~g----~~~~~-~~i~~~i~~~~~i~~~qe~ 102 (884)
T TIGR01522 32 HRRAFHGWNEFDVEEDESLW----KKFLSQFVKNPLILLLIASAVISVFMG----NIDDA-VSITLAILIVVTVGFVQEY 102 (884)
T ss_pred HHHHhcCCCcCCCCCCCCHH----HHHHHHHhhChHHHHHHHHHHHHHHHc----chhhH-HHHHhHHHHHHHHHHHHHH
Confidence 5889999999998765 555 8899999 8999988888888887643 22223 3333444566778899999
Q ss_pred HHhhhhH---hhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeee
Q 001341 90 NRYLSDK---KANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (1096)
Q Consensus 90 ~r~~~~~---~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~ 166 (1096)
++.++.+ ++.+.+++|+|||++++|+++||+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.|.
T Consensus 103 ~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~K~ 178 (884)
T TIGR01522 103 RSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVSKV 178 (884)
T ss_pred HHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCcceecc
Confidence 8877544 456789999999999999999999999999999999999999997654 899999999999999996
Q ss_pred ccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCccc
Q 001341 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (1096)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~ 246 (1096)
+..... +......+.+|++|+||.+.+| .+.++|++||.+|.
T Consensus 179 ~~~~~~-------------------------------------~~~~~~~~~~n~v~~GT~v~~G-~~~~~V~~tG~~T~ 220 (884)
T TIGR01522 179 TAPIPA-------------------------------------ATNGDLAERSNIAFMGTLVRCG-HGKGIVVGTGSNTE 220 (884)
T ss_pred cccccc-------------------------------------cccccccccCceEEeCCEEEee-eEEEEEEEecCccH
Confidence 532100 0001122567999999999998 79999999999999
Q ss_pred ccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcccchHH
Q 001341 247 LGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIPISI 323 (1096)
Q Consensus 247 ~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L 323 (1096)
+|++.+ .....++|+++.+++++..+.++.++++++++++++ +. +.+|...+...++ +++.++|++|
T Consensus 221 ~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~v~---llv~aiP~~L 290 (884)
T TIGR01522 221 FGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQ------GKDWLEMFTISVS---LAVAAIPEGL 290 (884)
T ss_pred HHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh------cCCHHHHHHHHHH---HHHHHccchH
Confidence 998754 345567999999999998876665544444444332 11 2246655554443 7788999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCC----
Q 001341 324 KVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET---- 399 (1096)
Q Consensus 324 ~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~---- 399 (1096)
++.+.++...... +|.+. ++++|+++++|+||++++||||||||||+|+|+|++++..+..+...+
T Consensus 291 p~~vt~~l~~~~~------r~ak~----~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~ 360 (884)
T TIGR01522 291 PIIVTVTLALGVL------RMSKK----RAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSL 360 (884)
T ss_pred HHHHHHHHHHHHH------HHhhc----CCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCcc
Confidence 8766665555544 55544 388999999999999999999999999999999999987654321100
Q ss_pred ---ccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEE
Q 001341 400 ---GDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIK 476 (1096)
Q Consensus 400 ---~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~ 476 (1096)
++...+.+... ...++...+++.+.++||++..... ++. ..+||+|.|+++++++.|+.
T Consensus 361 ~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~-~~~---~~g~p~e~All~~~~~~~~~------------ 422 (884)
T TIGR01522 361 NQFGEVIVDGDVLH--GFYTVAVSRILEAGNLCNNAKFRNE-ADT---LLGNPTDVALIELLMKFGLD------------ 422 (884)
T ss_pred CCCCcccccccccc--cccCHHHHHHHHHHhhhCCCeecCC-CCC---cCCChHHHHHHHHHHHcCcH------------
Confidence 00000000000 0112345678888999998764322 121 24799999999999887752
Q ss_pred eCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhcc-----CC-------chHHHHHHHHHHHh
Q 001341 477 FNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ-------QTRTFVEAVEQYSQ 544 (1096)
Q Consensus 477 ~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~-----~~-------~~~~~~~~~~~~a~ 544 (1096)
.....|+.++.+||+|+||||+++++...++++++|+|||||.|+++|.. +. ..+++.++++++++
T Consensus 423 --~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~ 500 (884)
T TIGR01522 423 --DLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMAS 500 (884)
T ss_pred --hHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHh
Confidence 11235678899999999999999998765678999999999999999963 11 12456778899999
Q ss_pred ccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeE
Q 001341 545 LGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINF 624 (1096)
Q Consensus 545 ~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv 624 (1096)
+|+|++++|||.+ ++||+|+|+++++||+|++++++|+.|+++||++
T Consensus 501 ~G~rvl~~A~~~~---------------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v 547 (884)
T TIGR01522 501 AGLRVIAFASGPE---------------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRI 547 (884)
T ss_pred cCCEEEEEEEEcC---------------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeE
Confidence 9999999999875 2689999999999999999999999999999999
Q ss_pred EEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHH
Q 001341 625 WMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKA 704 (1096)
Q Consensus 625 ~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~ 704 (1096)
+|+|||+.+||.++|+++|+...... +++|.+++...++ .
T Consensus 548 ~miTGD~~~tA~~ia~~~Gi~~~~~~-------------------------------------~v~g~~l~~~~~~---~ 587 (884)
T TIGR01522 548 IMITGDSQETAVSIARRLGMPSKTSQ-------------------------------------SVSGEKLDAMDDQ---Q 587 (884)
T ss_pred EEECCCCHHHHHHHHHHcCCCCCCCc-------------------------------------eeEhHHhHhCCHH---H
Confidence 99999999999999999999765432 2233333322111 1
Q ss_pred HhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHh-hccccccccchh
Q 001341 705 FTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFL 783 (1096)
Q Consensus 705 f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~aD~vl~~f~~l 783 (1096)
+.+ ...+..+|||++|+||.++|+.+|+.|+.|+|+|||.||+||+++|||||+| |.+++++++ +||+++.++++.
T Consensus 588 l~~--~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~-g~~g~~va~~aaDivl~dd~~~ 664 (884)
T TIGR01522 588 LSQ--IVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM-GQTGTDVAKEAADMILTDDDFA 664 (884)
T ss_pred HHH--HhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEec-CCCcCHHHHHhcCEEEcCCCHH
Confidence 111 1245789999999999999999999999999999999999999999999999 766667665 899999987775
Q ss_pred hhH-HHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhccCCCChhhh
Q 001341 784 KRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTV 862 (1096)
Q Consensus 784 ~~l-ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~d~~~~~~ 862 (1096)
... .+.+||.+|+|+++++.|.+..|+...++.+++.++ ....+++++|++|+|++++++|++++++| ++++.+
T Consensus 665 ~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~---~~~~pl~~~qiL~inl~~d~~~a~~l~~e--~~~~~~ 739 (884)
T TIGR01522 665 TILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLM---GFPNPLNAMQILWINILMDGPPAQSLGVE--PVDKDV 739 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH---cCCCchhHHHHHHHHHHHHhhHHHHhccC--CCChhH
Confidence 554 368999999999999999999988765544443332 33467999999999999999999988887 488889
Q ss_pred hcCCccccccccCCccCchhHHHHHHHHHHHHHHHHHHhhhhccccc--ccceehhhhhhHHHHHHHHhhhheeecch--
Q 001341 863 MQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEK--SEMEEVSMVALSGCIWLQAFVVALETNSF-- 938 (1096)
Q Consensus 863 ~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 938 (1096)
|++||+ .+.++++++.++..+++.+++++++.+++.+..+.... ....++.|.+++.+.+++.++++....++
T Consensus 740 m~~~P~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~ 816 (884)
T TIGR01522 740 MRKPPR---PRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQDGVITARDTTMTFTCFVFFDMFNALACRSQTKSVFE 816 (884)
T ss_pred hhCCCC---CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHccCCccccc
Confidence 999984 57788999999998888888887765554333221111 11235566667777777778887754442
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhhc-CHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001341 939 -TVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTY 1006 (1096)
Q Consensus 939 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~l~~~~~l~~~~~~k~~~~~~ 1006 (1096)
.++++..+|..+++.+++++++.++|.+. .++++.+ ++..|+.++++.++.++...+.|++++.+
T Consensus 817 ~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~---~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 817 IGFFSNRMFNYAVGGSIIGQLLVIYFPPLQ---SVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred cCcccCHHHHHHHHHHHHHHHHHHHHHHHH---HHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 23567778888788778888778877654 3454433 88899988888888888888899887654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-99 Score=971.62 Aligned_cols=771 Identities=19% Similarity=0.245 Sum_probs=565.9
Q ss_pred ccccCCCCceeecCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~i~~~~~d~~r 91 (1096)
+|+++||+|++..++.++| +.+++||.+|+++++++.++++++. +.+...+.++++++++.+...+++++.
T Consensus 147 ~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~~-----~~~~~~~~i~~i~~~~~~~~~~~~~k~ 217 (1054)
T TIGR01657 147 QRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLLD-----EYYYYSLCIVFMSSTSISLSVYQIRKQ 217 (1054)
T ss_pred HHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999877766 8899999999987776665555432 222233344445556777788888887
Q ss_pred hhhhHhhc--ceEEEEEECCeEEEEeccCCccccEEEee--cCCcccccEEEEeccCCCceEEEEecccCCCCCcEeeec
Q 001341 92 YLSDKKAN--EKEVWVVKQGIKKLIQSQDIRVGNIVWLR--ENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLI 167 (1096)
Q Consensus 92 ~~~~~~~n--~~~~~V~r~g~~~~i~~~~l~vGDIV~l~--~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~ 167 (1096)
.++.+++. +..++|+|||++++|+++||+|||||.|+ +|+.|||||+|+ +|.|.||||+|||||.|+.|.+
T Consensus 218 ~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll-----~g~~~VdES~LTGES~Pv~K~~ 292 (1054)
T TIGR01657 218 MQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLL-----SGSCIVNESMLTGESVPVLKFP 292 (1054)
T ss_pred HHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEE-----eCcEEEecccccCCccceeccc
Confidence 77766654 56899999999999999999999999999 999999999999 5669999999999999999975
Q ss_pred cccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeec------CCeEEEEEEEe
Q 001341 168 PAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRN------TEWACGVAVYT 241 (1096)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~------~~~~~gvVv~t 241 (1096)
..... ..+.++ ...+...+|++|+||.+.. .+.+.|+|++|
T Consensus 293 ~~~~~-----------------~~~~~~----------------~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~T 339 (1054)
T TIGR01657 293 IPDNG-----------------DDDEDL----------------FLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRT 339 (1054)
T ss_pred CCccc-----------------cccccc----------------cccccccceEEEcCCEEEEEecCCCCCcEEEEEEeC
Confidence 32100 000000 0011256899999999974 23799999999
Q ss_pred cCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcc
Q 001341 242 GNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIM 318 (1096)
Q Consensus 242 G~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 318 (1096)
|.+|..|++.+ ..+++.+++++.+.+++.+++.+.++.+++..+.+ ... +.+|...++ +++.+++++
T Consensus 340 G~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~-~~~------~~~~~~~~l---~~l~iiv~~ 409 (1054)
T TIGR01657 340 GFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIEL-IKD------GRPLGKIIL---RSLDIITIV 409 (1054)
T ss_pred CccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHc------CCcHHHHHH---HHHHHHHhh
Confidence 99999998765 34556788999998887766555443332222211 111 224555544 445588999
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCC
Q 001341 319 IPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE 398 (1096)
Q Consensus 319 iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~ 398 (1096)
+|++||+.++++...... +|.+. ++.+|+++.+|+||+++++|||||||||+|+|+|.+++..+......
T Consensus 410 vP~~LP~~~ti~l~~~~~------rL~k~----~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~ 479 (1054)
T TIGR01657 410 VPPALPAELSIGINNSLA------RLKKK----GIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFL 479 (1054)
T ss_pred cCchHHHHHHHHHHHHHH------HHHHC----CEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccc
Confidence 999999888777776655 45443 38999999999999999999999999999999999997644211000
Q ss_pred CccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEE-----
Q 001341 399 TGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASIL----- 473 (1096)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~----- 473 (1096)
.... + ........+..++++||++.... | ...|||.|.|+++++ |..+........
T Consensus 480 --~~~~-----~---~~~~~~~~~~~~~a~C~~~~~~~---~---~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~ 540 (1054)
T TIGR01657 480 --KIVT-----E---DSSLKPSITHKALATCHSLTKLE---G---KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSIL 540 (1054)
T ss_pred --cccc-----c---ccccCchHHHHHHHhCCeeEEEC---C---EEecCHHHHHHHHhC---CCEEECCCCcccccccc
Confidence 0000 0 00122335677899999986542 2 236999999999976 333322010000
Q ss_pred -EEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCchHHHHHHHHHHHhccceEEEE
Q 001341 474 -EIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCL 552 (1096)
Q Consensus 474 -~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~~~~~~~~~~~~a~~GlR~l~~ 552 (1096)
.+...+....+++++.+||+|++|||||+++.++++++++|+|||||.|+++|++...++++.+.+++|+++|+|||++
T Consensus 541 ~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLal 620 (1054)
T TIGR01657 541 AVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLAL 620 (1054)
T ss_pred cceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEE
Confidence 0111122468999999999999999999999876678899999999999999997666788999999999999999999
Q ss_pred EEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcH
Q 001341 553 AWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQ 632 (1096)
Q Consensus 553 A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~ 632 (1096)
|||++++.++.++.+ .+ ++++|+||+|+|+++++||+|++++++|+.|++|||+++|+|||++
T Consensus 621 A~k~l~~~~~~~~~~---------~~--------r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~ 683 (1054)
T TIGR01657 621 AYKELPKLTLQKAQD---------LS--------RDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNP 683 (1054)
T ss_pred EEeecCccchhhhhh---------cc--------HHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCH
Confidence 999997543322211 01 2568999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHcCCCCCCCCCeEEEEcCCcH-------------HHH-----HHHHHHHHHHccccCCCCCcEEEEEcChhH
Q 001341 633 NTAIQIALSCNFISPEPKGQLLSIDGKTE-------------DEV-----CRSLERVLLTMRITTSEPKDVAFVVDGWAL 694 (1096)
Q Consensus 633 ~ta~~ia~~~gl~~~~~~~~~~~~~~~~~-------------~~~-----~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l 694 (1096)
.||.++|++|||++++.. ++..+..+. ++. ...................++.++++|+.+
T Consensus 684 ~TA~~iA~~~gii~~~~~--vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l 761 (1054)
T TIGR01657 684 LTAVHVARECGIVNPSNT--LILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAF 761 (1054)
T ss_pred HHHHHHHHHcCCCCCCce--EEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHH
Confidence 999999999999876532 222211000 000 000000000000001123456789999999
Q ss_pred HHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcc
Q 001341 695 EIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAAD 774 (1096)
Q Consensus 695 ~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD 774 (1096)
+.+.+...+.+.++. .+..||||++|+||.++|+.+|+.|+.|+|+|||+||+||||+|||||||++. +|+.+||
T Consensus 762 ~~l~~~~~~~l~~~~--~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~---das~AA~ 836 (1054)
T TIGR01657 762 AVLQAHSPELLLRLL--SHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA---EASVAAP 836 (1054)
T ss_pred HHHHHhhHHHHHHHH--hcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc---cceeecc
Confidence 887665555555543 45679999999999999999999999999999999999999999999999443 3678999
Q ss_pred ccccccchhhhH-HHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhc
Q 001341 775 YSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI 853 (1096)
Q Consensus 775 ~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~ 853 (1096)
+++.++++-... ++.+||.++.++.++++|.+..+++..+. .....+.| .+++++|++|+|++++++|++++..
T Consensus 837 f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~----~~~l~~~~-~~l~~~Q~l~i~li~~~~~~l~l~~ 911 (1054)
T TIGR01657 837 FTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYS----VSILYLIG-SNLGDGQFLTIDLLLIFPVALLMSR 911 (1054)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHcc-CcCccHHHHHHHHHHHHHHHHHHHc
Confidence 999877665444 46899999999988877766555443322 22222233 5678999999999999999998888
Q ss_pred cCCCChhhhhcCCccccccccCCccCchhHHHHHHHHHHHHHHHHHHhhhhc
Q 001341 854 DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVY 905 (1096)
Q Consensus 854 ~~d~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 905 (1096)
++ |++.++++|| ...++++.++...++++++++++.++..+...
T Consensus 912 ~~--p~~~l~~~~P------~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~ 955 (1054)
T TIGR01657 912 NK--PLKKLSKERP------PSNLFSVYILTSVLIQFVLHILSQVYLVFELH 955 (1054)
T ss_pred CC--chhhcCCCCC------CccccCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 75 8889999988 25899999998888899888887766654443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-99 Score=947.23 Aligned_cols=805 Identities=20% Similarity=0.219 Sum_probs=566.9
Q ss_pred ccccCCCCceeecCCC-ccchhhhHHHHHHHHHHHHHHHHHHHHHHhhcccc-c-----cCccchhhHHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT-P-----VNPASTWGPLIFIFAVSATKE 84 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~-~-----~~~~~~~~~l~~i~~i~~i~~ 84 (1096)
+|+++||+|+++.++. ++| +.+++||++++++.++++++++++.... + ...+...+.++++++++++.+
T Consensus 53 ~rl~~~G~N~l~~~~~~~~~----~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~ 128 (903)
T PRK15122 53 ERLQRYGPNEVAHEKPPHAL----VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLR 128 (903)
T ss_pred HHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHHH
Confidence 5899999999998775 455 7899999999998888888888875311 0 011223344556667788899
Q ss_pred HHHHHHHhhh---hHhhcceEEEEEECC------eEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecc
Q 001341 85 AWDDYNRYLS---DKKANEKEVWVVKQG------IKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAA 155 (1096)
Q Consensus 85 ~~~d~~r~~~---~~~~n~~~~~V~r~g------~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~ 155 (1096)
+++++++.++ .+++.+.+++|+||| ++++|+++||+|||||.|++||+|||||+|+++++ +.||||+
T Consensus 129 ~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VDES~ 204 (903)
T PRK15122 129 FWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFISQAV 204 (903)
T ss_pred HHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEccc
Confidence 9999998664 556677899999994 79999999999999999999999999999997655 8999999
Q ss_pred cCCCCCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEE
Q 001341 156 LDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWAC 235 (1096)
Q Consensus 156 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~ 235 (1096)
|||||.|+.|.+.... + +.+.. +...+++....+.+|++|+||.+.+| .+.
T Consensus 205 LTGES~PV~K~~~~~~--------------~--~~~~~------------~~~~~~~~~~~~~~n~vfaGT~V~~G-~~~ 255 (903)
T PRK15122 205 LTGEALPVEKYDTLGA--------------V--AGKSA------------DALADDEGSLLDLPNICFMGTNVVSG-TAT 255 (903)
T ss_pred cCCCCcceeeeccccc--------------c--ccccc------------cccccccCCcccccceEEeCCEEEee-eEE
Confidence 9999999999641100 0 00000 00001111223678999999999998 799
Q ss_pred EEEEEecCcccccccCCC--CCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHH
Q 001341 236 GVAVYTGNETKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFEL 313 (1096)
Q Consensus 236 gvVv~tG~~T~~~~~~~~--~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (1096)
++|++||.+|.+|++.+. .+..++++++.++++...+..+.++++.+..+++.+. ..+|...+..+++
T Consensus 256 ~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~-------~~~~~~~l~~ais--- 325 (903)
T PRK15122 256 AVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT-------KGDWLEALLFALA--- 325 (903)
T ss_pred EEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-------cCCHHHHHHHHHH---
Confidence 999999999999987652 2445689999999988776666555444443332211 1245655554443
Q ss_pred HhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCE
Q 001341 314 LCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGI 393 (1096)
Q Consensus 314 l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~ 393 (1096)
+++.++|++|++.+.++....+. +|.+. ++++|+++++|+||++++||||||||||+|+|++.+++..+.
T Consensus 326 l~V~~~Pe~Lp~~vt~~La~g~~------~mak~----~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~ 395 (903)
T PRK15122 326 VAVGLTPEMLPMIVSSNLAKGAI------AMARR----KVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSG 395 (903)
T ss_pred HHHHHccchHHHHHHHHHHHHHH------HHHHc----CCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCC
Confidence 77889999997655555444433 45444 489999999999999999999999999999999998752110
Q ss_pred eecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEE
Q 001341 394 FYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASIL 473 (1096)
Q Consensus 394 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~ 473 (1096)
. . + .+++...++|. .. +. ..+||.|.|+++++.+.+..
T Consensus 396 ---~------~-----------~---~~~l~~a~l~s-~~----~~-----~~~~p~e~All~~a~~~~~~--------- 433 (903)
T PRK15122 396 ---R------K-----------D---ERVLQLAWLNS-FH----QS-----GMKNLMDQAVVAFAEGNPEI--------- 433 (903)
T ss_pred ---C------C-----------h---HHHHHHHHHhC-CC----CC-----CCCChHHHHHHHHHHHcCch---------
Confidence 0 0 0 12233333331 11 11 15799999999999876532
Q ss_pred EEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccC----C-------chHHHHHHHHHH
Q 001341 474 EIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG----Q-------QTRTFVEAVEQY 542 (1096)
Q Consensus 474 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~----~-------~~~~~~~~~~~~ 542 (1096)
.....|+.++.+||+|.||+|+++++.. +|++++++|||||.|+++|..- . ..+++.+.++++
T Consensus 434 -----~~~~~~~~~~~~pF~s~~k~ms~v~~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~ 507 (903)
T PRK15122 434 -----VKPAGYRKVDELPFDFVRRRLSVVVEDA-QGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAY 507 (903)
T ss_pred -----hhhhcCceEEEeeeCCCcCEEEEEEEcC-CCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHH
Confidence 1123567788999999999999999875 5778999999999999999631 1 123567788999
Q ss_pred HhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCC
Q 001341 543 SQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGI 622 (1096)
Q Consensus 543 a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGI 622 (1096)
+.+|+|++++|||+++.++..++ ..+..|+|++|+|+++++||+|++++++|++|+++||
T Consensus 508 a~~G~rvlavA~k~~~~~~~~~~--------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI 567 (903)
T PRK15122 508 NADGFRVLLVATREIPGGESRAQ--------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGV 567 (903)
T ss_pred HhCCCEEEEEEEeccCccccccc--------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCC
Confidence 99999999999999865432110 0123578999999999999999999999999999999
Q ss_pred eEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHH
Q 001341 623 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYR 702 (1096)
Q Consensus 623 kv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~ 702 (1096)
+++|+|||++.||.++|+++||... . +++|.+++.+.++
T Consensus 568 ~v~miTGD~~~tA~aIA~~lGI~~~--~-------------------------------------vi~G~el~~~~~~-- 606 (903)
T PRK15122 568 AVKVLTGDNPIVTAKICREVGLEPG--E-------------------------------------PLLGTEIEAMDDA-- 606 (903)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCC--C-------------------------------------ccchHhhhhCCHH--
Confidence 9999999999999999999999421 1 2233333322111
Q ss_pred HHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHH-Hhhccccccccc
Q 001341 703 KAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQA-ARAADYSIGKFR 781 (1096)
Q Consensus 703 ~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a-~~~aD~vl~~f~ 781 (1096)
.+.+. ..+..+|||++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| |+ |+++ +++||++|.+++
T Consensus 607 -el~~~--v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm-g~-gtdvAkeaADiVLldd~ 681 (903)
T PRK15122 607 -ALARE--VEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISV-DS-GADIAKESADIILLEKS 681 (903)
T ss_pred -HHHHH--hhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe-Cc-ccHHHHHhcCEEEecCC
Confidence 11111 234679999999999999999999999999999999999999999999999 64 5555 559999999888
Q ss_pred hhhhH-HHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhccCCCChh
Q 001341 782 FLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEG 860 (1096)
Q Consensus 782 ~l~~l-ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~d~~~~ 860 (1096)
+.... .+.+||.+|+|+++++.|.+..|+...+..++..++ .+..|+.+.|++|.|+++|+ |.+++.+| ++++
T Consensus 682 f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~---~~~~pl~~~qil~~nli~D~-~~lal~~d--~~~~ 755 (903)
T PRK15122 682 LMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAF---IPFLPMLAIHLLLQNLMYDI-SQLSLPWD--KMDK 755 (903)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH---hccchhHHHHHHHHHHHHHH-HHHhhcCC--CCCH
Confidence 86655 468999999999999999988887655544443333 23357899999999999995 88888888 4888
Q ss_pred hhhcCCccccccccCCccCchhHHHHHHHHHHHHHHHHHHhhhhccccccc----ceehhhhhhHHHHHHHHhhhheeec
Q 001341 861 TVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSE----MEEVSMVALSGCIWLQAFVVALETN 936 (1096)
Q Consensus 861 ~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1096)
++| +||+ ..+.+++++.+++.-. .+.+.++..|++.++.+..+... ..+..|..+..+.+++.++++....
T Consensus 756 ~~m-~~P~---~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~~~ 830 (903)
T PRK15122 756 EFL-RKPR---KWDAKNIGRFMLWIGP-TSSIFDITTFALMWFVFAANSVEMQALFQSGWFIEGLLSQTLVVHMLRTQKI 830 (903)
T ss_pred hhc-CCCC---CCChhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccCcHhhhhhhHHHHHHHHHHHHHHHHHhhCcCCC
Confidence 889 6662 4455566654332111 22223333333322222211101 1122233333444444555555432
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhhc-CHhHHHHHHHHHHHHHHHHHHHHH
Q 001341 937 SFTVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKY 1001 (1096)
Q Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~l~~~~~l~~~~~~k~ 1001 (1096)
. ++.+...+..+++.++++++..++|... ++.++++.+ ++.+|+.++.+.++.++...+.|.
T Consensus 831 ~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~ 893 (903)
T PRK15122 831 P--FIQSTAALPVLLTTGLIMAIGIYIPFSP-LGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKR 893 (903)
T ss_pred C--cCcchHHHHHHHHHHHHHHHHHHhhHHH-HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2223344444445555556666666511 223455543 778888887777766666666663
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-99 Score=946.28 Aligned_cols=774 Identities=19% Similarity=0.230 Sum_probs=557.9
Q ss_pred ccccCCCCceeecCCCc-cchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~~-~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~i~~~~~d~~ 90 (1096)
+|+++||+|+++.++.+ +| +.+++||.+|++++++++++++++.. .+...+.++++++++.+.++++++|
T Consensus 75 ~r~~~~G~N~l~~~~~~s~~----~~~~~~~~~p~~~lL~~aa~ls~~~~-----~~~~a~~I~~iv~i~~~i~~~qe~r 145 (902)
T PRK10517 75 SAREQHGENELPAQKPLPWW----VHLWVCYRNPFNILLTILGAISYATE-----DLFAAGVIALMVAISTLLNFIQEAR 145 (902)
T ss_pred HHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHc-----cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999998875 55 88999999999988888888887642 2233344556677888899999999
Q ss_pred Hhhh---hHhhcceEEEEEEC------CeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCC
Q 001341 91 RYLS---DKKANEKEVWVVKQ------GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETD 161 (1096)
Q Consensus 91 r~~~---~~~~n~~~~~V~r~------g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~ 161 (1096)
+.++ ++++.+.+++|+|| |++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||||.
T Consensus 146 a~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES~ 221 (902)
T PRK10517 146 STKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGESL 221 (902)
T ss_pred HHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCCC
Confidence 8764 56677889999999 789999999999999999999999999999997654 8999999999999
Q ss_pred cEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEe
Q 001341 162 LKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241 (1096)
Q Consensus 162 ~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~t 241 (1096)
|+.|.+... .+.+..+.+.+|++|+||.+.+| .+.++|++|
T Consensus 222 PV~K~~~~~--------------------------------------~~~~~~~~~~~n~vfaGT~V~~G-~~~~vV~at 262 (902)
T PRK10517 222 PVEKFATTR--------------------------------------QPEHSNPLECDTLCFMGTNVVSG-TAQAVVIAT 262 (902)
T ss_pred ceecccccc--------------------------------------cccccCccccccceeeCceEeee-eEEEEEEEe
Confidence 999965311 01112234678999999999998 699999999
Q ss_pred cCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcc
Q 001341 242 GNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIM 318 (1096)
Q Consensus 242 G~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 318 (1096)
|.+|.+|++.+ ....+++++++.+++++..+..+.++++.++++++.+. ..+|...+..+++ +++.+
T Consensus 263 G~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~-------~~~~~~~l~~als---v~V~~ 332 (902)
T PRK10517 263 GANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYT-------KGDWWEAALFALS---VAVGL 332 (902)
T ss_pred ccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHh-------cCCHHHHHHHHHH---HHHHH
Confidence 99999998764 44567899999999999887776666665554443221 1245555554444 67789
Q ss_pred cchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCC
Q 001341 319 IPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE 398 (1096)
Q Consensus 319 iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~ 398 (1096)
+|++||+.+.++....+. +|.+++ +++|+++++|+||++++||||||||||+|+|+|+++... .+.
T Consensus 333 ~Pe~LP~~vt~~la~g~~------~mak~~----ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~---~~~- 398 (902)
T PRK10517 333 TPEMLPMIVTSTLARGAV------KLSKQK----VIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI---SGK- 398 (902)
T ss_pred cccHHHHHHHHHHHHHHH------HHHhCC----cEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC---CCC-
Confidence 999998655544444433 454443 899999999999999999999999999999999876310 000
Q ss_pred CccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeC
Q 001341 399 TGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFN 478 (1096)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~ 478 (1096)
...+++...++|.... . ..+||.|.|+++++...+. .
T Consensus 399 -------------------~~~~ll~~a~l~~~~~-----~-----~~~~p~d~All~~a~~~~~--------------~ 435 (902)
T PRK10517 399 -------------------TSERVLHSAWLNSHYQ-----T-----GLKNLLDTAVLEGVDEESA--------------R 435 (902)
T ss_pred -------------------CHHHHHHHHHhcCCcC-----C-----CCCCHHHHHHHHHHHhcch--------------h
Confidence 0123344444443221 1 1579999999999865320 1
Q ss_pred CeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhcc----CC-------chHHHHHHHHHHHhccc
Q 001341 479 GSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA----GQ-------QTRTFVEAVEQYSQLGL 547 (1096)
Q Consensus 479 ~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~----~~-------~~~~~~~~~~~~a~~Gl 547 (1096)
.....|+.++.+||||+||||+++++.. ++.+.+++|||||.|+++|+. +. ..+++.+..++++++|+
T Consensus 436 ~~~~~~~~~~~~pFds~~k~msvvv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~ 514 (902)
T PRK10517 436 SLASRWQKIDEIPFDFERRRMSVVVAEN-TEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGL 514 (902)
T ss_pred hhhhcCceEEEeeeCCCcceEEEEEEEC-CCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCC
Confidence 1234567788999999999999999875 566789999999999999963 11 12356677889999999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEE
Q 001341 548 RTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWML 627 (1096)
Q Consensus 548 R~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~ml 627 (1096)
||+++|||+++.++. ++ ....|+|++|+|+++++||+||+++++|++|+++||+|+|+
T Consensus 515 rvlavA~k~~~~~~~-~~---------------------~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~mi 572 (902)
T PRK10517 515 RVVAVATKYLPAREG-DY---------------------QRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKIL 572 (902)
T ss_pred EEEEEEEecCCcccc-cc---------------------ccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEE
Confidence 999999998865321 00 01136899999999999999999999999999999999999
Q ss_pred CCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhh
Q 001341 628 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTE 707 (1096)
Q Consensus 628 TGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~ 707 (1096)
|||++.||.++|+++||... . +++|.+++.+.++ .+.+
T Consensus 573 TGD~~~tA~~IA~~lGI~~~--~-------------------------------------v~~G~el~~l~~~---el~~ 610 (902)
T PRK10517 573 TGDSELVAAKVCHEVGLDAG--E-------------------------------------VLIGSDIETLSDD---ELAN 610 (902)
T ss_pred cCCCHHHHHHHHHHcCCCcc--C-------------------------------------ceeHHHHHhCCHH---HHHH
Confidence 99999999999999999421 1 2233333322111 1111
Q ss_pred hhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccchhhhH-
Q 001341 708 LAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL- 786 (1096)
Q Consensus 708 l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l~~l- 786 (1096)
. ..+..+|+|++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| |+..+-|+++||++|.++++....
T Consensus 611 ~--~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAm-g~gtdvAkeaADiVLldd~~~~I~~ 687 (902)
T PRK10517 611 L--AERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISV-DGAVDIAREAADIILLEKSLMVLEE 687 (902)
T ss_pred H--HhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEe-CCcCHHHHHhCCEEEecCChHHHHH
Confidence 1 234679999999999999999999999999999999999999999999999 643334556999999998886655
Q ss_pred HHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhccCCCChhhhhcCC
Q 001341 787 ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHP 866 (1096)
Q Consensus 787 ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~d~~~~~~~~~p 866 (1096)
.+.+||.+|+|+++.+.|.+..|+...+..++..++. +..|+.+.|++|.|+++| +|.+++.+|+ +++.+|++|
T Consensus 688 ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~---~~~pl~~~qiL~inl~~D-~~~~al~~d~--~~~~~m~~p 761 (902)
T PRK10517 688 GVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL---PFLPMLPLHLLIQNLLYD-VSQVAIPFDN--VDDEQIQKP 761 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh---hhhhhHHHHHHHHHHHHH-HhHHhhcCCC--CChhhhcCC
Confidence 4689999999999999999988886665555544432 225789999999999999 7888888884 888899999
Q ss_pred ccccccccCCccCchhHHH-HHHHHHHHHHH---HHHHhhhhcccccccc-eehhhhhhHHHHHHHH---hhhheeecch
Q 001341 867 QILFYCQAGRLLNPSTFAG-WFGRSLFHAIV---AFVISIHVYAYEKSEM-EEVSMVALSGCIWLQA---FVVALETNSF 938 (1096)
Q Consensus 867 ~~y~~~~~~~~~~~~~~~~-~~~~~~~~~~v---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~ 938 (1096)
|+|+. ..+.+ .+..+++.+++ .|++.++.+....... ..+.+..|...++.+. ++++....
T Consensus 762 ~r~~~---------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~-- 830 (902)
T PRK10517 762 QRWNP---------ADLGRFMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRI-- 830 (902)
T ss_pred CCCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCCC--
Confidence 96432 22222 22334443322 2222222222111100 0112223555555554 44544322
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhhc-C--HhHHHHHHHHHH
Q 001341 939 TVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-Q--PSYWITMFLIVA 990 (1096)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~w~~~~l~~~ 990 (1096)
.++.+...+..+++.++++++..++|... ...++++.. + ...|+.++++..
T Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~l~~~~~~~~~~~~~~~ 884 (902)
T PRK10517 831 PFIQSRAAWPLMIMTLIVMAVGIALPFSP-LASYLQLQALPLSYFPWLVAILAGY 884 (902)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhhHHH-HHHhhCCcCCChhHHHHHHHHHHHH
Confidence 23345556666666666666666666322 123344433 3 355554444333
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-97 Score=929.77 Aligned_cols=751 Identities=18% Similarity=0.210 Sum_probs=546.1
Q ss_pred ccccCCCCceeecCCC-ccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~i~~~~~d~~ 90 (1096)
+|+++||+|+++.++. ++| +.+++||.+|++++++++++++++.. .+...+.++++++++++.++++++|
T Consensus 41 ~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~p~~~iL~~~a~ls~~~~-----~~~~~~iI~~iv~~~~~i~~~~e~~ 111 (867)
T TIGR01524 41 ERLAEFGPNQTVEEKKVPNL----RLLIRAFNNPFIYILAMLMGVSYLTD-----DLEATVIIALMVLASGLLGFIQESR 111 (867)
T ss_pred HHHHhcCCCcCCCCCCCCHH----HHHHHHHhhHHHHHHHHHHHHHHHHh-----hHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 5889999999999876 455 88999999999988888888887642 2233344556667788889999998
Q ss_pred Hhhh---hHhhcceEEEEEE------CCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCC
Q 001341 91 RYLS---DKKANEKEVWVVK------QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETD 161 (1096)
Q Consensus 91 r~~~---~~~~n~~~~~V~r------~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~ 161 (1096)
..++ .+++.+.+++|+| ||++++|+++||+|||||.|++||+|||||+|+++++ +.||||+|||||.
T Consensus 112 a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGES~ 187 (867)
T TIGR01524 112 AERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGESL 187 (867)
T ss_pred HHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCCCC
Confidence 7654 5667788999999 9999999999999999999999999999999997655 8999999999999
Q ss_pred cEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEe
Q 001341 162 LKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241 (1096)
Q Consensus 162 ~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~t 241 (1096)
|+.|.+.... +.+....+.+|++|+||.+.+| .+.++|++|
T Consensus 188 PV~K~~~~~~--------------------------------------~~~~~~~~~~n~vfaGT~v~~G-~~~~~V~~t 228 (867)
T TIGR01524 188 PVEKFVEDKR--------------------------------------ARDPEILERENLCFMGTNVLSG-HAQAVVLAT 228 (867)
T ss_pred cccccCCccc--------------------------------------cccccccccccceecCCeEEEe-EEEEEEEEE
Confidence 9999653100 0111123578999999999998 799999999
Q ss_pred cCcccccccCCC--CCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhccc
Q 001341 242 GNETKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMI 319 (1096)
Q Consensus 242 G~~T~~~~~~~~--~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i 319 (1096)
|.+|.+|++.+. .+.+++++++.+++++.++..+.++++++.++++.+. ..+|...+..+++ +++.++
T Consensus 229 G~~T~~gki~~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~al~---l~v~~i 298 (867)
T TIGR01524 229 GSSTWFGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLM-------KGDWLEAFLFALA---VAVGLT 298 (867)
T ss_pred cCccHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHh-------cCCHHHHHHHHHH---HHHHhC
Confidence 999999987541 2445689999999999888777766666554443211 1245555554443 678899
Q ss_pred chHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCC
Q 001341 320 PISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET 399 (1096)
Q Consensus 320 P~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~ 399 (1096)
|++|++.+.++....+. +|.+. ++++|+++++|+||++++||||||||||+|+|+|.+++...
T Consensus 299 P~~Lp~~vt~~la~g~~------~mak~----~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~------- 361 (867)
T TIGR01524 299 PEMLPMIVSSNLAKGAI------NMSKK----KVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSS------- 361 (867)
T ss_pred cchHHHHHHHHHHHHHH------HHHhC----CcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCC-------
Confidence 99998655555544443 45444 38899999999999999999999999999999999864110
Q ss_pred ccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCC
Q 001341 400 GDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNG 479 (1096)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~ 479 (1096)
+. ...+++...++|+... ...+||.|.|+++++.+.+. ..
T Consensus 362 ~~----------------~~~~~l~~a~l~~~~~----------~~~~~p~~~Al~~~~~~~~~--------------~~ 401 (867)
T TIGR01524 362 GE----------------TSERVLKMAWLNSYFQ----------TGWKNVLDHAVLAKLDESAA--------------RQ 401 (867)
T ss_pred CC----------------CHHHHHHHHHHhCCCC----------CCCCChHHHHHHHHHHhhch--------------hh
Confidence 00 0122334334433211 11469999999999875321 11
Q ss_pred eeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccC-----------CchHHHHHHHHHHHhccce
Q 001341 480 SVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-----------QQTRTFVEAVEQYSQLGLR 548 (1096)
Q Consensus 480 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~-----------~~~~~~~~~~~~~a~~GlR 548 (1096)
....|+.++.+||+|+||||++++++. ++...+++|||||.|+++|+.. +..+++.+.+++++++|+|
T Consensus 402 ~~~~~~~~~~~pF~s~~k~ms~~v~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~r 480 (867)
T TIGR01524 402 TASRWKKVDEIPFDFDRRRLSVVVENR-AEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIR 480 (867)
T ss_pred HhhcCceEEEeccCCCcCEEEEEEEcC-CceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCE
Confidence 123567788999999999999999864 4467899999999999999631 1124677888999999999
Q ss_pred EEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEEC
Q 001341 549 TLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLT 628 (1096)
Q Consensus 549 ~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlT 628 (1096)
++++|||+++.++.. + .+..|+||+|+|+++++||+|++++++|++|+++||+++|+|
T Consensus 481 vlavA~~~~~~~~~~-~---------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiT 538 (867)
T TIGR01524 481 VIAVATKTLKVGEAD-F---------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLT 538 (867)
T ss_pred EEEEEEeccCccccc-c---------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEc
Confidence 999999998754310 0 012368999999999999999999999999999999999999
Q ss_pred CCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhh
Q 001341 629 GDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL 708 (1096)
Q Consensus 629 GD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l 708 (1096)
||++.||.++|+++||...+ .+.| .+++...+ +.+.+
T Consensus 539 GD~~~tA~aIA~~lGI~~~~------v~~g---------------------------------~~l~~~~~---~el~~- 575 (867)
T TIGR01524 539 GDNEIVTARICQEVGIDAND------FLLG---------------------------------ADIEELSD---EELAR- 575 (867)
T ss_pred CCCHHHHHHHHHHcCCCCCC------eeec---------------------------------HhhhhCCH---HHHHH-
Confidence 99999999999999995321 1222 22222111 11111
Q ss_pred hhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHH-HhhccccccccchhhhH-
Q 001341 709 AILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQA-ARAADYSIGKFRFLKRL- 786 (1096)
Q Consensus 709 ~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a-~~~aD~vl~~f~~l~~l- 786 (1096)
...+..+|+|++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| |+ |+++ +++||++|.++++-...
T Consensus 576 -~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAm-g~-gtdvAk~aADiVLldd~~~~I~~ 652 (867)
T TIGR01524 576 -ELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV-DT-AADIAKEASDIILLEKSLMVLEE 652 (867)
T ss_pred -HhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEe-CC-ccHHHHHhCCEEEecCChHHHHH
Confidence 1245679999999999999999999999999999999999999999999999 64 4555 55999999988886655
Q ss_pred HHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhccCCCChhhhhcCC
Q 001341 787 ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHP 866 (1096)
Q Consensus 787 ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~d~~~~~~~~~p 866 (1096)
.+.+||.+|+|+++.+.|.+..|+...+..++..++ .+..|+++.|++|+|+++| +|++++++|+ +++.+|++|
T Consensus 653 ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~---~~~~pl~~~qil~inl~~d-~~~~al~~~~--~~~~~m~~p 726 (867)
T TIGR01524 653 GVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAF---IPFLPMLSLHLLIQNLLYD-FSQLTLPWDK--MDREFLKKP 726 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH---hhhhhHHHHHHHHHHHHHH-HHHHhhcCCC--CChHhhCCC
Confidence 468999999999999999988887655544443333 2235799999999999999 7999888884 888899988
Q ss_pred ccccccccCCccCchhHHHHHHHHHHHHH---HHHHHhhhhccccccc-ceehhhhhhHHHHHHH---Hhhhheeecchh
Q 001341 867 QILFYCQAGRLLNPSTFAGWFGRSLFHAI---VAFVISIHVYAYEKSE-MEEVSMVALSGCIWLQ---AFVVALETNSFT 939 (1096)
Q Consensus 867 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 939 (1096)
+.++. + .....++..+++.++ ..|++.+..+...... .....+..|+..++.+ .++++.... .
T Consensus 727 ~~~~~----~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~--~ 796 (867)
T TIGR01524 727 HQWEQ----K----GMGRFMLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTEKI--P 796 (867)
T ss_pred CCCCh----h----hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcCCC--C
Confidence 74321 1 111222234444332 2222222222111010 0011223355554444 455554432 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 001341 940 VFQHLAIWGNLVAFYIINWIFSAIPSS 966 (1096)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 966 (1096)
.+.+...+..+++.++++++..++|..
T Consensus 797 ~~~n~~~~~~~~~~~~~~~~~~~~p~~ 823 (867)
T TIGR01524 797 FIQSRAAAPVMIATLLVMALGIIIPFS 823 (867)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHhchh
Confidence 334556666666666666666777753
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-93 Score=881.91 Aligned_cols=632 Identities=21% Similarity=0.228 Sum_probs=496.2
Q ss_pred ccccCCCCceeecCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~i~~~~~d~~r 91 (1096)
+|+++||+|+++.++.++| +.+++||.+|+++.++++++++++.. ++. ..+.+++++++++..++++++++
T Consensus 9 ~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~~----~~~-~~~~i~~~~~i~~~i~~~qe~~a 79 (755)
T TIGR01647 9 KRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIALE----NWV-DFVIILGLLLLNATIGFIEENKA 79 (755)
T ss_pred HHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhhc----chh-hhhhhhhhhHHHHHHHHHHHHHH
Confidence 5889999999998666655 78899999999988888888887643 222 33445566667888899999998
Q ss_pred hhh---hHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeeecc
Q 001341 92 YLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIP 168 (1096)
Q Consensus 92 ~~~---~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~~ 168 (1096)
.++ .+++.+++++|+|||++++|+++||+|||||.|++||+|||||+|+++++ +.||||+|||||.|+.|.
T Consensus 80 ~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K~-- 153 (755)
T TIGR01647 80 GNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTKK-- 153 (755)
T ss_pred HHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEec--
Confidence 764 45567889999999999999999999999999999999999999996544 999999999999999993
Q ss_pred ccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCccccc
Q 001341 169 AACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLG 248 (1096)
Q Consensus 169 ~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~ 248 (1096)
.+|.+|+||.+.+| .+.++|++||.+|.+|
T Consensus 154 -------------------------------------------------~~~~v~aGT~v~~G-~~~~~V~~tG~~T~~g 183 (755)
T TIGR01647 154 -------------------------------------------------TGDIAYSGSTVKQG-EAEAVVTATGMNTFFG 183 (755)
T ss_pred -------------------------------------------------cCCeeeccCEEEcc-EEEEEEEEcCCccHHH
Confidence 45799999999998 7999999999999999
Q ss_pred ccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcccchHHHH
Q 001341 249 MTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIPISIKV 325 (1096)
Q Consensus 249 ~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v 325 (1096)
++.+ ..+..++++++.+++++.++.++.++++++.++++.... ..+|...+..++ .+++.++|++|++
T Consensus 184 ~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~i---~vlv~a~P~~Lp~ 254 (755)
T TIGR01647 184 KAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGR------GESFREGLQFAL---VLLVGGIPIAMPA 254 (755)
T ss_pred HHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHH---HHHHHhCCcchHH
Confidence 8654 445566899999999998887777766666555432211 124555554443 3788899999986
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCCccCCCc
Q 001341 326 SLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKD 405 (1096)
Q Consensus 326 tl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~~~~~~~ 405 (1096)
.+.++....+. +|.++ ++++|+++++|+||.+++||||||||||+|+|+|.+++..+..+
T Consensus 255 ~~~~~la~g~~------r~ak~----gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~---------- 314 (755)
T TIGR01647 255 VLSVTMAVGAA------ELAKK----KAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF---------- 314 (755)
T ss_pred HHHHHHHHHHH------HHHhC----CeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCC----------
Confidence 66655555444 45444 48999999999999999999999999999999999987543100
Q ss_pred hhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEEEE
Q 001341 406 VGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYE 485 (1096)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 485 (1096)
+..+++...++|+. ...+||.|.|+++++++.+. ....|+
T Consensus 315 ------------~~~~~l~~a~~~~~------------~~~~~pi~~Ai~~~~~~~~~----------------~~~~~~ 354 (755)
T TIGR01647 315 ------------DKDDVLLYAALASR------------EEDQDAIDTAVLGSAKDLKE----------------ARDGYK 354 (755)
T ss_pred ------------CHHHHHHHHHHhCC------------CCCCChHHHHHHHHHHHhHH----------------HHhcCc
Confidence 01134445555542 11579999999998876430 123467
Q ss_pred EEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCC-chHHHHHHHHHHHhccceEEEEEEEecCHHHHHH
Q 001341 486 ILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ-QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQE 564 (1096)
Q Consensus 486 il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~-~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~ 564 (1096)
+++.+||+|.+|+|+++++.+++|+.++++||||+.|+++|+... ..+++.+.+++++.+|+|++++|+|+.
T Consensus 355 ~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~~------- 427 (755)
T TIGR01647 355 VLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTDE------- 427 (755)
T ss_pred eEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEcC-------
Confidence 788999999999999999876557788899999999999997542 245678889999999999999999821
Q ss_pred HHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCC
Q 001341 565 WSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644 (1096)
Q Consensus 565 ~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 644 (1096)
|++|+|+|+++++||+||+++++|+.|+++||+++|+|||++.||.++|+++||
T Consensus 428 --------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI 481 (755)
T TIGR01647 428 --------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGL 481 (755)
T ss_pred --------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 378999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhh
Q 001341 645 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ 724 (1096)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~q 724 (1096)
..+.. .+ +++ .+|..++...+ +.+.++ ..+..+|+|++|+|
T Consensus 482 ~~~~~-------~~---~~l------------------------~~~~~~~~~~~---~~~~~~--~~~~~vfAr~~Pe~ 522 (755)
T TIGR01647 482 GTNIY-------TA---DVL------------------------LKGDNRDDLPS---GELGEM--VEDADGFAEVFPEH 522 (755)
T ss_pred CCCCc-------CH---HHh------------------------cCCcchhhCCH---HHHHHH--HHhCCEEEecCHHH
Confidence 64311 00 000 00111100000 011111 23456999999999
Q ss_pred HHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccchhhhH-HHhhchhhhhhhhhhhh
Q 001341 725 KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQ 803 (1096)
Q Consensus 725 K~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~ 803 (1096)
|.++|+.+|+.|++|+|+|||+||+|||++|||||+| |+..+-|+++||++|.++++.... .+.+||.+|+|+++.+.
T Consensus 523 K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm-~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~ 601 (755)
T TIGR01647 523 KYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV-AGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVI 601 (755)
T ss_pred HHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe-cCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 654333455999999998886655 46899999999999999
Q ss_pred HhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhccC
Q 001341 804 YSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDK 855 (1096)
Q Consensus 804 ~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~ 855 (1096)
|.+..|+...+..++..++.++ + ++++|++|.|++++. |.+++.+|+
T Consensus 602 ~~~~~n~~~~~~~~~~~l~~~~---~-l~~~~il~~~l~~d~-~~~~l~~~~ 648 (755)
T TIGR01647 602 YRIAETIRIVFFFGLLILILNF---Y-FPPIMVVIIAILNDG-TIMTIAYDN 648 (755)
T ss_pred HHhcccHHHHHHHHHHHHHhCc---c-hhHHHHHHHHHHHhH-hHhhccCCC
Confidence 9999988765544444433332 3 899999999999996 688888986
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-93 Score=809.01 Aligned_cols=869 Identities=20% Similarity=0.237 Sum_probs=646.8
Q ss_pred ccccCCCCceeecCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccc-c-------CccchhhHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP-V-------NPASTWGPLIFIFAVSATK 83 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~-~-------~~~~~~~~l~~i~~i~~i~ 83 (1096)
+++.+-|+|.++.+|.+.- +..+.+|+...+.+.+++.++++++..... . +....-+.|..++.++.+.
T Consensus 66 ~~L~rdG~NaL~Ppk~t~~---wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~ 142 (1019)
T KOG0203|consen 66 EKLARDGPNALTPPKTTPE---WIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLF 142 (1019)
T ss_pred hhhccCCCCCCCCCCCChH---HHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecC
Confidence 3677899999999887541 266889999988888888888877543211 0 1111224455566667777
Q ss_pred HHHHHHHH---hhhhHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCC
Q 001341 84 EAWDDYNR---YLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGET 160 (1096)
Q Consensus 84 ~~~~d~~r---~~~~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs 160 (1096)
.++|+.+. ..+.+.+.++.++|+|||....+..+++||||+|.++-||+||||++++++.+ |+||+|+|||||
T Consensus 143 ~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTGes 218 (1019)
T KOG0203|consen 143 SYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTGES 218 (1019)
T ss_pred CCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEecccccccc
Confidence 78887775 34678889999999999999999999999999999999999999999999988 999999999999
Q ss_pred CcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEE
Q 001341 161 DLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240 (1096)
Q Consensus 161 ~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~ 240 (1096)
+|..+.+.. .+..|+...|+.|.+|.+..| .++|+|++
T Consensus 219 EP~~~~~~~-----------------------------------------t~~~~~Et~Ni~f~st~~veG-~~~givi~ 256 (1019)
T KOG0203|consen 219 EPQTRSPEF-----------------------------------------THENPLETRNIAFFSTNCVEG-TGRGIVIA 256 (1019)
T ss_pred CCccCCccc-----------------------------------------cccCchhheeeeeeeeEEecc-eEEEEEEe
Confidence 999885431 122346789999999999998 79999999
Q ss_pred ecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhc
Q 001341 241 TGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSI 317 (1096)
Q Consensus 241 tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 317 (1096)
||.+|.+|+++. .....++|+++.++.++.++..+++++.+.+++++... ...|...+.. ++.++++
T Consensus 257 tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~-------gy~~l~avv~---~i~iivA 326 (1019)
T KOG0203|consen 257 TGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL-------GYEWLRAVVF---LIGIIVA 326 (1019)
T ss_pred cCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-------cchhHHHhhh---hheeEEe
Confidence 999999999876 45678899999999999888777766655555443322 1245554443 3347888
Q ss_pred ccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecC
Q 001341 318 MIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN 397 (1096)
Q Consensus 318 ~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~ 397 (1096)
.+|++|++++......-++ +|..++ |++|++.++|+||..++||+|||||||+|+|+|.++|.++.....
T Consensus 327 nvPeGL~~tvTv~Ltltak------rMa~Kn----c~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~ 396 (1019)
T KOG0203|consen 327 NVPEGLLATVTVCLTLTAK------RMARKN----CLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEA 396 (1019)
T ss_pred cCcCCccceehhhHHHHHH------HHhhce----eEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeee
Confidence 9999998777766666665 565555 999999999999999999999999999999999999999876544
Q ss_pred CCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceee---ecCCccHHHHHHHHHhcCeEEeeeCCcEEE
Q 001341 398 ETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILY---KAQSQDEEALVHAAAQLHMVLVNKNASILE 474 (1096)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~---~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~ 474 (1096)
+..+.. .-+.....++....+.++..+||.+.....+++.... ..|++.|.||++++.-.-..
T Consensus 397 d~~~~~----~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~---------- 462 (1019)
T KOG0203|consen 397 DTTEDQ----SGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGS---------- 462 (1019)
T ss_pred echhhh----hcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcch----------
Confidence 321111 0011122356778899999999998877555543222 26999999999998643211
Q ss_pred EEeCCeeEEEEEEEEeccCCCCceeEEEEEeCC--CCeEEEEecChhhhhhhhhcc----CC-------chHHHHHHHHH
Q 001341 475 IKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH--SGNISLLSKGADEAILPYAHA----GQ-------QTRTFVEAVEQ 541 (1096)
Q Consensus 475 ~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~--~~~~~l~~KGa~~~il~~~~~----~~-------~~~~~~~~~~~ 541 (1096)
+...++.++.+..+||+|.+|+.-.+.+..+ +.+..+.+|||||.++++|+. ++ ..+.+.+...+
T Consensus 463 --~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~ 540 (1019)
T KOG0203|consen 463 --VMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLE 540 (1019)
T ss_pred --HHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHH
Confidence 1234667788899999999999988887542 357899999999999999973 11 13567888899
Q ss_pred HHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcC
Q 001341 542 YSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAG 621 (1096)
Q Consensus 542 ~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aG 621 (1096)
+...|-||+.||++.++++++.+..+- ..... ..--.||.|+|++++-||+|..+|+++.+|+.||
T Consensus 541 lg~~GerVlgF~~~~l~~~~~p~~~~f---~~d~~-----------n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAG 606 (1019)
T KOG0203|consen 541 LGGLGERVLGFCDLELPDEKFPRGFQF---DTDDV-----------NFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAG 606 (1019)
T ss_pred hhhcchHHHHHHHHhcchhcCCCceEe---ecCCC-----------CCcchhccccchhhccCCCcccCchhhhhhhhhC
Confidence 999999999999999998776542110 00000 1112689999999999999999999999999999
Q ss_pred CeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccc---cCCCCCcEEEEEcChhHHHHH
Q 001341 622 INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRI---TTSEPKDVAFVVDGWALEIAL 698 (1096)
Q Consensus 622 Ikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~lvi~g~~l~~~~ 698 (1096)
|||.|+|||++.||.++|++.||+..... ..++. .+.... ........+.|++|.+|..+.
T Consensus 607 IkvimVTgdhpiTAkAiA~~vgIi~~~~e---------t~e~~-------a~r~~~~v~~vn~~~a~a~VihG~eL~~~~ 670 (1019)
T KOG0203|consen 607 IKVIMVTGDHPITAKAIAKSVGIISEGSE---------TVEDI-------AKRLNIPVEQVNSRDAKAAVIHGSELPDMS 670 (1019)
T ss_pred ceEEEEecCccchhhhhhhheeeecCCch---------hhhhh-------HHhcCCcccccCccccceEEEecccccccC
Confidence 99999999999999999999998776432 11111 111111 111223568899999887765
Q ss_pred HHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHh-hccccc
Q 001341 699 KHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSI 777 (1096)
Q Consensus 699 ~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~aD~vl 777 (1096)
++ ++.++.......||||.||+||..||+..|+.|.+|+.+|||+||+||||+||||||| |-+|.++++ +||++|
T Consensus 671 ~~---qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAM-GiaGSDvsKqAADmIL 746 (1019)
T KOG0203|consen 671 SE---QLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GIAGSDVSKQAADMIL 746 (1019)
T ss_pred HH---HHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceee-ccccchHHHhhcceEE
Confidence 43 2333334455689999999999999999999999999999999999999999999999 777777776 899999
Q ss_pred cccchhhhHH-HhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchh-hhhHHHHHHHhHhhhHhHhhhhccC
Q 001341 778 GKFRFLKRLI-LVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSL-FNSVSLMAYNVFYTSIPVLVSTIDK 855 (1096)
Q Consensus 778 ~~f~~l~~ll-l~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~-~~~~~ll~~n~~~~~lp~~~~~~~~ 855 (1096)
.|+||.+++. +.+||.+|+|++|.+.|.+..|+--..+.++|. +.|.|+ +..+.+|.+.+.+|.+|++.+++|.
T Consensus 747 LDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi----~~giPLplgtitIL~IDLgTDmvPAiSLAYE~ 822 (1019)
T KOG0203|consen 747 LDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFI----LFGIPLPLGTVTILCIDLGTDIVPAISLAYEK 822 (1019)
T ss_pred ecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHH----HhCCCcccchhhhhhhHhhcccchhhhHhccC
Confidence 9999999884 689999999999999999888875443333332 244454 8899999999999999999999995
Q ss_pred CCChhhhhcCCccccccccCCccCchhHHHHHH-HHHHHHHHHHHHhhhhccccc-----------------------cc
Q 001341 856 DLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFG-RSLFHAIVAFVISIHVYAYEK-----------------------SE 911 (1096)
Q Consensus 856 d~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~-----------------------~~ 911 (1096)
+|.++|++||+ ..+.+++.|.+.+....+ -+.+|++.-|+..|..+.... +.
T Consensus 823 --aEsDIM~r~PR--~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~Dsy 898 (1019)
T KOG0203|consen 823 --AESDIMLRPPR--NPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSY 898 (1019)
T ss_pred --chhhHHhcCCC--CCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhc
Confidence 99999999995 457788999998765554 588998887766554442110 00
Q ss_pred ce------------ehh---hhhhHHHHHHHHhhhheeecchh--HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHH
Q 001341 912 ME------------EVS---MVALSGCIWLQAFVVALETNSFT--VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFR 974 (1096)
Q Consensus 912 ~~------------~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1096)
++ +.. +++...+.|..++.+-...++.. -+.|+.++..++.-.++..++++.|... ..++
T Consensus 899 GQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~---~~l~ 975 (1019)
T KOG0203|consen 899 GQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVL---YALG 975 (1019)
T ss_pred cccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHH---HHhc
Confidence 00 111 22223334444444432222221 1456666666666666667778888754 3444
Q ss_pred hhc-CHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 001341 975 LCS-QPSYWITMFLIVAAGMGPIVALKYFRYTYRASK 1010 (1096)
Q Consensus 975 ~~~-~~~~w~~~~l~~~~~l~~~~~~k~~~~~~~p~~ 1010 (1096)
+.. .+.||++-+-..++.++.+.+-|++-|.|--+.
T Consensus 976 ~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P~gw 1012 (1019)
T KOG0203|consen 976 MYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRYPGGW 1012 (1019)
T ss_pred cCCCCcEEEEecccceeeeeeHHHHHhHhhhhCCCch
Confidence 433 678888877777777777888888777664443
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-82 Score=728.65 Aligned_cols=779 Identities=20% Similarity=0.277 Sum_probs=531.1
Q ss_pred ccccCCCCceeecCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~i~~~~~d~~r 91 (1096)
.|+.-||+|.+..+..+.+ ..|+.+--+|+.+|..+..+++..- +...+...++++-+.|+....+|..+.
T Consensus 168 ~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~d-----~Y~~YA~cI~iisv~Si~~sv~e~r~q 238 (1140)
T KOG0208|consen 168 DRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLAD-----SYYYYAFCIVIISVYSIVLSVYETRKQ 238 (1140)
T ss_pred hHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhcc-----cchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3778899999999998877 7788887777755554444444321 222222333444456777788888777
Q ss_pred hhhhHhhcc--eEEEEEECCeEEEEeccCCccccEEEeec-CCcccccEEEEeccCCCceEEEEecccCCCCCcEeeecc
Q 001341 92 YLSDKKANE--KEVWVVKQGIKKLIQSQDIRVGNIVWLRE-NDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIP 168 (1096)
Q Consensus 92 ~~~~~~~n~--~~~~V~r~g~~~~i~~~~l~vGDIV~l~~-g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~~ 168 (1096)
.+..+++-. .+|+|+|||.|++|.++|||||||+.+.+ +-..|||++|+ +|.|.||||+|||||.|+.|.|.
T Consensus 239 s~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li-----~g~civNEsmLTGESVPv~K~~l 313 (1140)
T KOG0208|consen 239 SIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLI-----SGDCIVNESMLTGESVPVTKTPL 313 (1140)
T ss_pred HHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEE-----eCcEEeecccccCCcccccccCC
Confidence 777777654 47999999999999999999999999999 89999999999 67899999999999999999876
Q ss_pred ccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeec-----CCeEEEEEEEecC
Q 001341 169 AACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRN-----TEWACGVAVYTGN 243 (1096)
Q Consensus 169 ~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~-----~~~~~gvVv~tG~ 243 (1096)
+.-.+. ...... .......|++|.||.+.. |+.+.++|++||.
T Consensus 314 ~~~~~~-------~~~~~~-------------------------~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF 361 (1140)
T KOG0208|consen 314 PMGTDS-------LDSITI-------------------------SMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGF 361 (1140)
T ss_pred cccccc-------CcCeee-------------------------chhhcCcceeeccceEEEeecCCCCceEEEEEeccc
Confidence 411000 000000 001146789999998844 4478999999999
Q ss_pred cccccccCC-CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcccchH
Q 001341 244 ETKLGMTRG-IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIPIS 322 (1096)
Q Consensus 244 ~T~~~~~~~-~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~ 322 (1096)
.|.-|+..+ ...+|+.+++-..+.+..+.++.++.++.++..+..+.. .+.+....+ ++.+.++...+|.+
T Consensus 362 ~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~-----~g~~~~~ii---irsLDliTi~VPPA 433 (1140)
T KOG0208|consen 362 STTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNL-----LGVPLKTII---IRSLDLITIVVPPA 433 (1140)
T ss_pred cccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHH-----cCCCHHHHh---hhhhcEEEEecCCC
Confidence 999998755 445555666555555443333332222221111111111 022333333 34445888899999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEe-e-cCCCc
Q 001341 323 IKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIF-Y-GNETG 400 (1096)
Q Consensus 323 L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~-y-~~~~~ 400 (1096)
||.++.+.-...-. ++.+ .++.|-++.-+...|+++.+|||||||||++.+.+-.+..-... . +....
T Consensus 434 LPAaltvG~~~a~~------RLkk----k~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~ 503 (1140)
T KOG0208|consen 434 LPAALTVGIIYAQS------RLKK----KGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELK 503 (1140)
T ss_pred chhhhhHHHHHHHH------HHHh----cCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhh
Confidence 98777665433222 3322 24778899999999999999999999999999998877652211 0 00000
Q ss_pred cCCCch--hhHHh-hhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeC--------
Q 001341 401 DALKDV--GLLNA-ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKN-------- 469 (1096)
Q Consensus 401 ~~~~~~--~~~~~-~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~-------- 469 (1096)
....+. ...+. .+........+..++|.||+..... |.+ .|||.|.-+.+. .|..+.+..
T Consensus 504 ~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~---g~l---~GDPLdlkmfe~---t~w~~ee~~~~~~~~~~ 574 (1140)
T KOG0208|consen 504 VVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVD---GTL---VGDPLDLKMFES---TGWVYEEADIEDEATRE 574 (1140)
T ss_pred hhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeC---Cee---ccCceeeeeeec---cceEEEeccccchhhhh
Confidence 000000 00000 1111123457889999999877543 322 567777555443 344443311
Q ss_pred -----CcEEEEE---eCC----eeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCchHHHHH
Q 001341 470 -----ASILEIK---FNG----SVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 537 (1096)
Q Consensus 470 -----~~~~~~~---~~~----~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~~~~~~~ 537 (1096)
+..+... .++ ..+.+-+++.+||+|+.+|||||+..+++.+..+|+|||||.|.+.|+++..+.++++
T Consensus 575 ~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~dy~e 654 (1140)
T KOG0208|consen 575 FNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPADYQE 654 (1140)
T ss_pred hCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCccHHH
Confidence 0001110 011 1237999999999999999999999988889999999999999999999999999999
Q ss_pred HHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHH
Q 001341 538 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETL 617 (1096)
Q Consensus 538 ~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l 617 (1096)
.++.|+.+|+|++++|+|+++.. .|.+. ..-.++.+|.||+|+|++.+|++||++++.+|+.|
T Consensus 655 vl~~Yt~~GfRVIAlA~K~L~~~---~~~~~--------------~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL 717 (1140)
T KOG0208|consen 655 VLKEYTHQGFRVIALASKELETS---TLQKA--------------QKLSRDTVESNLEFLGLIVMENKLKEETKRVIDEL 717 (1140)
T ss_pred HHHHHHhCCeEEEEEecCccCcc---hHHHH--------------hhccHhhhhccceeeEEEEeecccccccHHHHHHH
Confidence 99999999999999999999875 34321 11234789999999999999999999999999999
Q ss_pred HHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCC--cHHHHH-------HHHHHHH-------HHc----cc
Q 001341 618 RKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK--TEDEVC-------RSLERVL-------LTM----RI 677 (1096)
Q Consensus 618 ~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~-------~~~----~~ 677 (1096)
++|+|+++|+|||+..||+.+|++||++.+... ++..+.. +.+... +..+... ... ..
T Consensus 718 ~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~--v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~ 795 (1140)
T KOG0208|consen 718 NRANIRTVMCTGDNLLTAISVAKECGMIEPQVK--VIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSL 795 (1140)
T ss_pred HhhcceEEEEcCCchheeeehhhcccccCCCCe--EEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccCh
Confidence 999999999999999999999999999998765 3332222 111100 0000000 000 01
Q ss_pred cCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCe
Q 001341 678 TTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 757 (1096)
Q Consensus 678 ~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv 757 (1096)
......++.+.++|+.+..+.++..+.+.++. .+..|||||+|.||+++|+.+|+.|..|+|+|||+||+.|||+|||
T Consensus 796 d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il--~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdv 873 (1140)
T KOG0208|consen 796 DVLSEKDYHLAMSGKTFQVILEHFPELVPKIL--LKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADV 873 (1140)
T ss_pred hhhccceeEEEecCchhHHHHhhcHHHHHHHH--hcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhccc
Confidence 12234578899999999999876666666653 4578999999999999999999999999999999999999999999
Q ss_pred eEEecCCchHHHHhhcccccc--ccchhhhHHHhhchhhhhhhhhhhhHhhhhhHHHH-HHHHHHHHhhccccchhhhhH
Q 001341 758 GVGISGREGLQAARAADYSIG--KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLIC-FIQIFFSFISGLSGTSLFNSV 834 (1096)
Q Consensus 758 GIam~g~~~~~a~~~aD~vl~--~f~~l~~lll~~GR~~~~~i~~~i~~~~~kni~~~-~~~~~~~~~~~~~g~~~~~~~ 834 (1096)
||+++.+| |.-||.|.-. +-+.... ++.+||....-.- ..+|.++++ .+||.-.++.... ...++..
T Consensus 874 GISLSeaE---ASvAApFTSk~~~I~cVp~-vIrEGRaALVTSf-----~~FkYMalYs~iqFisv~~LY~~-~~nl~D~ 943 (1140)
T KOG0208|consen 874 GISLSEAE---ASVAAPFTSKTPSISCVPD-VIREGRAALVTSF-----ACFKYMALYSAIQFISVVFLYLI-NSNLGDL 943 (1140)
T ss_pred Ccchhhhh---HhhcCccccCCCchhhHhH-HHhhhhhhhhhhH-----HHHHHHHHHHHHHHHhhheeeee-cccccch
Confidence 99996555 6667777655 3333333 4699999887664 444444443 5566555443333 3446788
Q ss_pred HHHHHHhHhhhHhHhhhhccCCCChhhhhcCCccccccccCCccCchhHHHHHHHHHHHHHHHHHHhh
Q 001341 835 SLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISI 902 (1096)
Q Consensus 835 ~ll~~n~~~~~lp~~~~~~~~d~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 902 (1096)
|.+.+.++....-+++ ....|+.++..-++|+ .++++++.+...+++.++..++-+.+++
T Consensus 944 Qfl~iDLlii~pia~~-m~~~~a~~~L~~~rP~-------~~L~s~~~~~~l~~q~vli~l~q~i~~l 1003 (1140)
T KOG0208|consen 944 QFLFIDLLIITPIAVM-MSRFDASDKLFPKRPP-------TNLLSKKILVPLLLQIVLICLVQWILTL 1003 (1140)
T ss_pred hhhhhHHHHHHHHHHH-HccCcHHHHhcCCCCC-------ccccccchhhhhHHHHHHHHHHHHhhhe
Confidence 8888887766443332 2233355555555665 3778887777666666655555554443
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-74 Score=687.13 Aligned_cols=543 Identities=18% Similarity=0.222 Sum_probs=402.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccc-----C--ccchhhHHHHHHHHHHHHHHH----HHHHHhhh---hHhhcce-EE
Q 001341 39 EQFSRFMNQYFLLIACLQLWSLITPV-----N--PASTWGPLIFIFAVSATKEAW----DDYNRYLS---DKKANEK-EV 103 (1096)
Q Consensus 39 ~qf~~~~n~~~l~~~~l~~~~~~~~~-----~--~~~~~~~l~~i~~i~~i~~~~----~d~~r~~~---~~~~n~~-~~ 103 (1096)
.+|++|+.+.+++.++++++....+. + .+..+. +.++++++.+...+ .++|..++ ++++.++ ++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~-i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFS-IFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 47788998888888888775432211 1 011222 22333334333333 35555443 4455554 67
Q ss_pred E-EEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeeeccccccCCCHhhhccc
Q 001341 104 W-VVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKI 182 (1096)
Q Consensus 104 ~-V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 182 (1096)
+ |.|||++++|++++|+|||+|.|++||.|||||+++ +|.+.||||+|||||.|+.|.+..
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vi-----eG~~~VDESaLTGES~PV~K~~g~------------- 168 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVI-----KGLATVDESAITGESAPVIKESGG------------- 168 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEE-----EcceEEecchhcCCCCceeccCCC-------------
Confidence 5 679999999999999999999999999999999999 566899999999999999995310
Q ss_pred eeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCcccccccCC---CCCCCcC
Q 001341 183 KGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLT 259 (1096)
Q Consensus 183 ~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s 259 (1096)
+.+ .+++||.+.+| ++.++|+.||.+|.++++.+ .++.+++
T Consensus 169 ----------------------------------d~~-~V~aGT~v~~G-~~~i~Vta~g~~T~lgki~~lve~a~~~kt 212 (673)
T PRK14010 169 ----------------------------------DFD-NVIGGTSVASD-WLEVEITSEPGHSFLDKMIGLVEGATRKKT 212 (673)
T ss_pred ----------------------------------ccC-eeecCceeecc-eEEEEEEEecccCHHHHHHHHHhhccccCC
Confidence 123 39999999998 89999999999999998754 4566779
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcccchHHHHHHHHHHHHHHHHHh
Q 001341 260 AVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFID 339 (1096)
Q Consensus 260 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~ 339 (1096)
|+|..+..+...+.++.++++ ..+.. +.. . ..+...+... +.+++.+||++|+..+.++....+.
T Consensus 213 p~e~~l~~l~~~l~ii~l~~~--~~~~~-~~~--~----~~~~~~~~~~---val~V~~IP~aL~~~~~~~~~~g~~--- 277 (673)
T PRK14010 213 PNEIALFTLLMTLTIIFLVVI--LTMYP-LAK--F----LNFNLSIAML---IALAVCLIPTTIGGLLSAIGIAGMD--- 277 (673)
T ss_pred HHHHHHHHHHHHHhHHHHHHH--HHHHH-HHh--h----ccHHHHHHHH---HHHHHHhhhhhHHHHHHHHHHHHHH---
Confidence 999877665443332221111 11110 000 0 0111111111 2255667899987555554443333
Q ss_pred hhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCCccCCCchhhHHhhhcCChhH
Q 001341 340 WDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDV 419 (1096)
Q Consensus 340 ~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 419 (1096)
+|.+. ++++|+++++|+||++++||+|||||||+|++.+.++...+ ....
T Consensus 278 ---r~ak~----gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~-----------------------~~~~ 327 (673)
T PRK14010 278 ---RVTQF----NILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK-----------------------SSSF 327 (673)
T ss_pred ---HHhhC----CEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC-----------------------CccH
Confidence 55444 48999999999999999999999999999776665543100 0112
Q ss_pred HHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCcee
Q 001341 420 IRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRM 499 (1096)
Q Consensus 420 ~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 499 (1096)
.+++...++|+.. ..||.+.|+++++++.|+... ....+.+||++++|+|
T Consensus 328 ~~ll~~a~~~~~~-------------s~~P~~~AIv~~a~~~~~~~~-----------------~~~~~~~pF~~~~k~~ 377 (673)
T PRK14010 328 ERLVKAAYESSIA-------------DDTPEGRSIVKLAYKQHIDLP-----------------QEVGEYIPFTAETRMS 377 (673)
T ss_pred HHHHHHHHHhcCC-------------CCChHHHHHHHHHHHcCCCch-----------------hhhcceecccccccee
Confidence 3455666667532 359999999999988765321 0011347999999999
Q ss_pred EEEEEeCCCCeEEEEecChhhhhhhhhccCC--chHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhc
Q 001341 500 SVVVKDCHSGNISLLSKGADEAILPYAHAGQ--QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLI 577 (1096)
Q Consensus 500 sviv~~~~~~~~~l~~KGa~~~il~~~~~~~--~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~ 577 (1096)
++.++ ++ .+.|||++.++++|.... .+.++.+..++++++|+|+++++
T Consensus 378 gv~~~----g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~------------------------ 427 (673)
T PRK14010 378 GVKFT----TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVL------------------------ 427 (673)
T ss_pred EEEEC----CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEE------------------------
Confidence 99753 33 355999999999997432 23457777889999999999877
Q ss_pred hHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEc
Q 001341 578 DREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSID 657 (1096)
Q Consensus 578 ~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~ 657 (1096)
.|++++|+++++|++|++++++|++||++||+++|+|||++.||.++|+++|+
T Consensus 428 --------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI------------- 480 (673)
T PRK14010 428 --------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV------------- 480 (673)
T ss_pred --------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC-------------
Confidence 47899999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCC
Q 001341 658 GKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDY 737 (1096)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~ 737 (1096)
..+++|++|+||.++|+.+|+.|+
T Consensus 481 --------------------------------------------------------~~v~A~~~PedK~~iV~~lQ~~G~ 504 (673)
T PRK14010 481 --------------------------------------------------------DRFVAECKPEDKINVIREEQAKGH 504 (673)
T ss_pred --------------------------------------------------------ceEEcCCCHHHHHHHHHHHHhCCC
Confidence 236789999999999999999999
Q ss_pred eEEEEcCCccChhhhhhcCeeEEecCCchHHHH-hhccccccccchhhhH-HHhhchhhhhhhhhhhhHhhhhhHHHHHH
Q 001341 738 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAA-RAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFI 815 (1096)
Q Consensus 738 ~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~-~~aD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~kni~~~~~ 815 (1096)
.|+|+|||.||+|+|++||||||| |+ |++++ ++||+++.++++-+.. .+.+||.+|.|+++++.|.+.-|+.-+|.
T Consensus 505 ~VaMtGDGvNDAPALa~ADVGIAM-gs-GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~ 582 (673)
T PRK14010 505 IVAMTGDGTNDAPALAEANVGLAM-NS-GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFA 582 (673)
T ss_pred EEEEECCChhhHHHHHhCCEEEEe-CC-CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHH
Confidence 999999999999999999999999 64 55555 5999999998886665 46899999999999999999999887777
Q ss_pred HHHHHHhhccc
Q 001341 816 QIFFSFISGLS 826 (1096)
Q Consensus 816 ~~~~~~~~~~~ 826 (1096)
.+...|...+.
T Consensus 583 i~~a~~~~~~~ 593 (673)
T PRK14010 583 ILPAMFMAAMP 593 (673)
T ss_pred HHHHHHHHhcc
Confidence 66655554443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-72 Score=672.82 Aligned_cols=536 Identities=21% Similarity=0.219 Sum_probs=404.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccc------CccchhhH---HHHHHHHHHHHHHHHHHHHhhh---hHhhcce-EEEE
Q 001341 39 EQFSRFMNQYFLLIACLQLWSLITPV------NPASTWGP---LIFIFAVSATKEAWDDYNRYLS---DKKANEK-EVWV 105 (1096)
Q Consensus 39 ~qf~~~~n~~~l~~~~l~~~~~~~~~------~~~~~~~~---l~~i~~i~~i~~~~~d~~r~~~---~~~~n~~-~~~V 105 (1096)
.||++|+.+.+++.++++++..+.+. .....|.. +++.+++....|.++++|..++ ++++.+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 58999998888888888876543211 11233322 2223334555666777776654 4454554 6999
Q ss_pred EECCe-EEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeeeccccccCCCHhhhcccee
Q 001341 106 VKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKG 184 (1096)
Q Consensus 106 ~r~g~-~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~ 184 (1096)
+|+|+ +++|++++|+|||+|.|++||.|||||+++ +|.+.||||+|||||.|+.|++.
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vi-----eG~a~VDESaLTGES~PV~K~~G---------------- 167 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVI-----EGVASVDESAITGESAPVIRESG---------------- 167 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEE-----EccEEEEcccccCCCCceEeCCC----------------
Confidence 99988 899999999999999999999999999999 56689999999999999999532
Q ss_pred EEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCcccccccCC---CCCCCcCHH
Q 001341 185 VIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAV 261 (1096)
Q Consensus 185 ~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l 261 (1096)
+..+.+++||.+.+| ++.+.|+.+|.+|.++++.. .++.+++|+
T Consensus 168 --------------------------------~~~~~V~aGT~v~~G-~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~ 214 (679)
T PRK01122 168 --------------------------------GDFSSVTGGTRVLSD-WIVIRITANPGESFLDRMIALVEGAKRQKTPN 214 (679)
T ss_pred --------------------------------CccCeEEeceEEEee-eEEEEEEEecccCHHHHHHHHHHhccccCCHH
Confidence 111239999999998 89999999999999998753 455667999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhh
Q 001341 262 DAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD 341 (1096)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d 341 (1096)
++.++.+...++.+.+++++++..+. .|. +.++ .+... +.+++.++|++|+..+..+......
T Consensus 215 e~al~~l~~~l~~i~l~~~~~~~~~~-~~~------g~~~--~l~~~---iallV~aiP~alg~l~~~i~i~g~~----- 277 (679)
T PRK01122 215 EIALTILLAGLTIIFLLVVATLPPFA-AYS------GGAL--SITVL---VALLVCLIPTTIGGLLSAIGIAGMD----- 277 (679)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHH-HHh------CchH--HHHHH---HHHHHHcccchhhhHHHHHHHHHHH-----
Confidence 99888876655544433333322221 121 1122 22222 3367889999875444433333322
Q ss_pred ccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCCccCCCchhhHHhhhcCChhHHH
Q 001341 342 YEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIR 421 (1096)
Q Consensus 342 ~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (1096)
+|.+. ++++|++.++|+||++++||+|||||||+|+|++.+++..+. ....+
T Consensus 278 -r~ak~----gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----------------------~~~~~ 329 (679)
T PRK01122 278 -RVLQA----NVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG-----------------------VTEEE 329 (679)
T ss_pred -HHhcC----CeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC-----------------------CCHHH
Confidence 45444 489999999999999999999999999999999998753210 01124
Q ss_pred HHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHh-cCeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeE
Q 001341 422 FLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ-LHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMS 500 (1096)
Q Consensus 422 ~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~-~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrms 500 (1096)
++.+.++|+.. ..+|...|+++++++ .+... ....++..+.+||++.+|+|+
T Consensus 330 ll~~a~~~s~~-------------s~hP~~~AIv~~a~~~~~~~~--------------~~~~~~~~~~~pF~s~~~~~g 382 (679)
T PRK01122 330 LADAAQLSSLA-------------DETPEGRSIVVLAKQRFNLRE--------------RDLQSLHATFVPFSAQTRMSG 382 (679)
T ss_pred HHHHHHHhcCC-------------CCCchHHHHHHHHHhhcCCCc--------------hhhccccceeEeecCcCceEE
Confidence 55566666532 347899999999976 33211 111245667889999999888
Q ss_pred EEEEeCCCCeEEEEecChhhhhhhhhccC--CchHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhch
Q 001341 501 VVVKDCHSGNISLLSKGADEAILPYAHAG--QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLID 578 (1096)
Q Consensus 501 viv~~~~~~~~~l~~KGa~~~il~~~~~~--~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~ 578 (1096)
+.++ | ..|+|||++.+++.|... ..++++++.+++++++|+|++++|
T Consensus 383 v~~~----g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va------------------------- 431 (679)
T PRK01122 383 VDLD----G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVA------------------------- 431 (679)
T ss_pred EEEC----C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEE-------------------------
Confidence 7652 3 478999999999999643 224677888999999999999999
Q ss_pred HHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcC
Q 001341 579 REWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDG 658 (1096)
Q Consensus 579 r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~ 658 (1096)
.|++++|+++++|++|+|++++|++||++||+++|+|||++.||.++|+++|+
T Consensus 432 -------------~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI-------------- 484 (679)
T PRK01122 432 -------------EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV-------------- 484 (679)
T ss_pred -------------ECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC--------------
Confidence 46789999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCe
Q 001341 659 KTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYR 738 (1096)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~ 738 (1096)
..+++|++|+||.++|+.+|+.|+.
T Consensus 485 -------------------------------------------------------d~v~A~~~PedK~~iV~~lQ~~G~~ 509 (679)
T PRK01122 485 -------------------------------------------------------DDFLAEATPEDKLALIRQEQAEGRL 509 (679)
T ss_pred -------------------------------------------------------cEEEccCCHHHHHHHHHHHHHcCCe
Confidence 1367899999999999999999999
Q ss_pred EEEEcCCccChhhhhhcCeeEEecCCchHHHH-hhccccccccchhhhH-HHhhchhhhhhhhhhhhHhhhhhHHHHHH
Q 001341 739 TLAIGDGGNDVRMIQKADIGVGISGREGLQAA-RAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFI 815 (1096)
Q Consensus 739 v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~-~~aD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~kni~~~~~ 815 (1096)
|+|+|||.||+|||++||||||| | +|++++ ++||+++.|+++-+.. .+.+||...-.-..+..|++.--+.-+|.
T Consensus 510 VaMtGDGvNDAPALa~ADVGIAM-g-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~~~~~ 586 (679)
T PRK01122 510 VAMTGDGTNDAPALAQADVGVAM-N-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFA 586 (679)
T ss_pred EEEECCCcchHHHHHhCCEeEEe-C-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHHHHHH
Confidence 99999999999999999999999 6 455555 5999999998886665 46899998866555566766544444443
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-69 Score=647.24 Aligned_cols=546 Identities=20% Similarity=0.222 Sum_probs=408.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccc------cC---ccchhh--HHHHHHHHHHHHHHHHHHHHhhhhHh---hcce-EE
Q 001341 39 EQFSRFMNQYFLLIACLQLWSLITP------VN---PASTWG--PLIFIFAVSATKEAWDDYNRYLSDKK---ANEK-EV 103 (1096)
Q Consensus 39 ~qf~~~~n~~~l~~~~l~~~~~~~~------~~---~~~~~~--~l~~i~~i~~i~~~~~d~~r~~~~~~---~n~~-~~ 103 (1096)
.||++|..+.+++.++++++..+.+ .+ ++...+ .+++.+++....|.++++|..++..+ +.+. .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 5899999877888888887653321 01 121111 12222344555677788777665444 3444 58
Q ss_pred EEEE-CCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeeeccccccCCCHhhhccc
Q 001341 104 WVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKI 182 (1096)
Q Consensus 104 ~V~r-~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 182 (1096)
+|+| ||++++|++++|+|||+|.|++||+|||||+++ +|.+.||||+|||||.|+.|.+..
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vi-----eG~~~VDESaLTGES~PV~K~~g~------------- 169 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVI-----EGVASVDESAITGESAPVIKESGG------------- 169 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEE-----EccEEEEcccccCCCCceeecCCC-------------
Confidence 8885 899999999999999999999999999999999 566999999999999999995320
Q ss_pred eeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCcccccccCC---CCCCCcC
Q 001341 183 KGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLT 259 (1096)
Q Consensus 183 ~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s 259 (1096)
....+++||.+.+| ++.++|+.+|.+|.++++.. .++.+++
T Consensus 170 -----------------------------------~~~~V~aGT~v~~G-~~~i~Vt~~g~~S~lgri~~lve~a~~~kt 213 (675)
T TIGR01497 170 -----------------------------------DFASVTGGTRILSD-WLVVECTANPGETFLDRMIALVEGAQRRKT 213 (675)
T ss_pred -----------------------------------CcceeecCcEEEee-EEEEEEEEecccCHHHHHHHHHHhcccCCC
Confidence 11138999999998 89999999999999998754 4556679
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcccchHHHHHHHHH--HHHHHHH
Q 001341 260 AVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIPISIKVSLDLV--KSLYAKF 337 (1096)
Q Consensus 260 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~vtl~l~--~~~~~~~ 337 (1096)
|+|..++.+...+.++.+++++++..+. .|. ...+ .+... +.+++.++|++|......+ .++.
T Consensus 214 plq~~l~~l~~~l~~v~li~~~~~~~~~-~~~------~~~~--~~~~l---vallV~aiP~aLg~l~~av~iag~~--- 278 (675)
T TIGR01497 214 PNEIALTILLIALTLVFLLVTATLWPFA-AYG------GNAI--SVTVL---VALLVCLIPTTIGGLLSAIGIAGMD--- 278 (675)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc------ChhH--HHHHH---HHHHHHhCchhhhhHHHHHHHHHHH---
Confidence 9998888776554433322222211111 111 1111 12111 2367889999653222211 2332
Q ss_pred HhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCCccCCCchhhHHhhhcCCh
Q 001341 338 IDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 417 (1096)
Q Consensus 338 i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 417 (1096)
+|.+. ++++|++.++|+||++++||||||||||+|+|++.+++..+. .
T Consensus 279 -----r~ar~----gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----------------------~ 326 (675)
T TIGR01497 279 -----RVLGF----NVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG-----------------------V 326 (675)
T ss_pred -----HHHHC----CeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC-----------------------C
Confidence 44444 489999999999999999999999999999999998763110 0
Q ss_pred hHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCc
Q 001341 418 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRK 497 (1096)
Q Consensus 418 ~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk 497 (1096)
+..+++...++|+.. ..+|.+.|++++|++.|.... ...++..+..||++.+|
T Consensus 327 ~~~~ll~~aa~~~~~-------------s~hP~a~Aiv~~a~~~~~~~~--------------~~~~~~~~~~pf~~~~~ 379 (675)
T TIGR01497 327 DEKTLADAAQLASLA-------------DDTPEGKSIVILAKQLGIRED--------------DVQSLHATFVEFTAQTR 379 (675)
T ss_pred cHHHHHHHHHHhcCC-------------CCCcHHHHHHHHHHHcCCCcc--------------ccccccceEEEEcCCCc
Confidence 122455666666532 358999999999988765321 11234457889999988
Q ss_pred eeEEEEEeCCCCeEEEEecChhhhhhhhhccCC--chHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhh
Q 001341 498 RMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ--QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASST 575 (1096)
Q Consensus 498 rmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~--~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~ 575 (1096)
+|++.+. +| ..+.|||+|.+++.|.... .+.++.+.+++++++|+|++++|
T Consensus 380 ~sg~~~~---~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va---------------------- 432 (675)
T TIGR01497 380 MSGINLD---NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVC---------------------- 432 (675)
T ss_pred EEEEEEe---CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEE----------------------
Confidence 7776553 24 4689999999999886432 24668888999999999999999
Q ss_pred hchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEE
Q 001341 576 LIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS 655 (1096)
Q Consensus 576 ~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~ 655 (1096)
.|.+++|+++++|++||+++++|+.|+++||+++|+|||+..+|.++|+++|+
T Consensus 433 ----------------~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI----------- 485 (675)
T TIGR01497 433 ----------------EDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV----------- 485 (675)
T ss_pred ----------------ECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC-----------
Confidence 34689999999999999999999999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhc
Q 001341 656 IDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC 735 (1096)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~ 735 (1096)
..+++|++|++|.++|+.+|+.
T Consensus 486 ----------------------------------------------------------~~v~a~~~PedK~~~v~~lq~~ 507 (675)
T TIGR01497 486 ----------------------------------------------------------DDFIAEATPEDKIALIRQEQAE 507 (675)
T ss_pred ----------------------------------------------------------CEEEcCCCHHHHHHHHHHHHHc
Confidence 1356899999999999999999
Q ss_pred CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccchhhhH-HHhhchhhhhhhhhhhhHhhhhhHHHHH
Q 001341 736 DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICF 814 (1096)
Q Consensus 736 ~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~kni~~~~ 814 (1096)
|+.|+|+|||.||+|||++|||||+| |+..+-++++||+++.++++-+.. .+.+||..+.....+..|++...+.-+|
T Consensus 508 g~~VamvGDG~NDapAL~~AdvGiAm-~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~ 586 (675)
T TIGR01497 508 GKLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYF 586 (675)
T ss_pred CCeEEEECCCcchHHHHHhCCEeEEe-CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHH
Confidence 99999999999999999999999999 644444556999999998886655 4689999999988888999888887776
Q ss_pred HHHHHHHhhcc
Q 001341 815 IQIFFSFISGL 825 (1096)
Q Consensus 815 ~~~~~~~~~~~ 825 (1096)
..+-..|...+
T Consensus 587 ~~~~~~~~~~~ 597 (675)
T TIGR01497 587 AIIPAIFAAAY 597 (675)
T ss_pred HHHHHHHHhhC
Confidence 65544444443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-67 Score=595.72 Aligned_cols=759 Identities=20% Similarity=0.234 Sum_probs=483.3
Q ss_pred cCCCCceeecCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 001341 15 DLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLS 94 (1096)
Q Consensus 15 ~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~i~~~~~d~~r~~~ 94 (1096)
.+||+|+..-..+++. ..+.|.-..|+..|..+...+++.-. .|+.....+.+++.+-+. -.+|..+..+.
T Consensus 174 ~~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLDe----yWYySlFtLfMli~fE~t-lV~Qrm~~lse 244 (1160)
T KOG0209|consen 174 HKYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLDE----YWYYSLFTLFMLIAFEAT-LVKQRMRTLSE 244 (1160)
T ss_pred HHhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhHH----HHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3599999998888875 66777777788778878888877532 122333334333333222 22344443444
Q ss_pred hHhhc--ceEEEEEECCeEEEEeccCCccccEEEeec---CCcccccEEEEeccCCCceEEEEecccCCCCCcEeeeccc
Q 001341 95 DKKAN--EKEVWVVKQGIKKLIQSQDIRVGNIVWLRE---NDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPA 169 (1096)
Q Consensus 95 ~~~~n--~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~---g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~~~ 169 (1096)
.+.+. +..+.|+|+++|+.+..+||.|||+|.|.. ...||||.+|| .|.|.|||++|||||.|..|.++.
T Consensus 245 ~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL-----~GsciVnEaMLtGESvPl~KE~Ie 319 (1160)
T KOG0209|consen 245 FRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLL-----RGSCIVNEAMLTGESVPLMKESIE 319 (1160)
T ss_pred HHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEE-----ecceeechhhhcCCCccccccccc
Confidence 45554 346899999999999999999999999998 56799999999 788999999999999999997754
Q ss_pred cccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceee-------------cCCeEEE
Q 001341 170 ACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLR-------------NTEWACG 236 (1096)
Q Consensus 170 ~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~-------------~~~~~~g 236 (1096)
.- +.++.... +. .+...++|.||.+. +| -+.+
T Consensus 320 ~~---~~d~~ld~------~~-------------------------d~k~hVlfGGTkivQht~p~~~slk~pDg-gc~a 364 (1160)
T KOG0209|consen 320 LR---DSDDILDI------DR-------------------------DDKLHVLFGGTKIVQHTPPKKASLKTPDG-GCVA 364 (1160)
T ss_pred cC---Chhhhccc------cc-------------------------ccceEEEEcCceEEEecCCccccccCCCC-CeEE
Confidence 21 11111100 00 13445677777762 33 4899
Q ss_pred EEEEecCcccccccCCCC---CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHH
Q 001341 237 VAVYTGNETKLGMTRGIP---EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFEL 313 (1096)
Q Consensus 237 vVv~tG~~T~~~~~~~~~---~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (1096)
.|++||.||..|+..+.. ..+-|.=.+. .++|++. ++++.+...++.|..........-|..+ +-|.+
T Consensus 365 ~VlrTGFeTSQGkLvRtilf~aervTaNn~E-----tf~FILF-LlVFAiaAa~Yvwv~Gskd~~RsrYKL~---LeC~L 435 (1160)
T KOG0209|consen 365 YVLRTGFETSQGKLVRTILFSAERVTANNRE-----TFIFILF-LLVFAIAAAGYVWVEGSKDPTRSRYKLF---LECTL 435 (1160)
T ss_pred EEEeccccccCCceeeeEEecceeeeeccHH-----HHHHHHH-HHHHHHHhhheEEEecccCcchhhhhee---eeeeE
Confidence 999999999999876521 1111211111 1222221 2222233344566543322222334333 45666
Q ss_pred HhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCE
Q 001341 314 LCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGI 393 (1096)
Q Consensus 314 l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~ 393 (1096)
++...||.-||+.+++|....-.-+. +.++.|-.+--+--.|+||++|||||||||+..|.|+.+.-...
T Consensus 436 IlTSVvPpELPmELSmAVNsSL~ALa----------k~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~ 505 (1160)
T KOG0209|consen 436 ILTSVVPPELPMELSMAVNSSLIALA----------KLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSA 505 (1160)
T ss_pred EEeccCCCCCchhhhHHHHHHHHHHH----------HhceeecCccccccCCceeEEEecCCCccccccEEEEecccccC
Confidence 88889999998888777544322111 11233334444566899999999999999999999998753211
Q ss_pred eecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEE
Q 001341 394 FYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASIL 473 (1096)
Q Consensus 394 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~ 473 (1096)
. ..... .. .....+-+.++|.||+.....++ ..|||.|+|.+++. |..+...+..
T Consensus 506 ~-----~~~~~------~~---s~~p~~t~~vlAscHsLv~le~~------lVGDPlEKA~l~~v---~W~~~k~~~v-- 560 (1160)
T KOG0209|consen 506 D-----EGALT------PA---SKAPNETVLVLASCHSLVLLEDK------LVGDPLEKATLEAV---GWNLEKKNSV-- 560 (1160)
T ss_pred C-----ccccc------ch---hhCCchHHHHHHHHHHHHHhcCc------ccCChHHHHHHHhc---CcccccCccc--
Confidence 0 00000 00 01112456789999997755432 36999999999875 3333221110
Q ss_pred EEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCC---CeEEEEecChhhhhhhhhccCCchHHHHHHHHHHHhccceEE
Q 001341 474 EIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHS---GNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTL 550 (1096)
Q Consensus 474 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~---~~~~l~~KGa~~~il~~~~~~~~~~~~~~~~~~~a~~GlR~l 550 (1096)
. .-.+.....++.+.+.|+|..|||||++..... -+++..+|||||+|-.++.+- +.++++...+|+++|.|||
T Consensus 561 ~-p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dv--P~dY~~iYk~ytR~GsRVL 637 (1160)
T KOG0209|consen 561 C-PREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDV--PKDYDEIYKRYTRQGSRVL 637 (1160)
T ss_pred C-CCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhC--chhHHHHHHHHhhccceEE
Confidence 0 002223367789999999999999999986422 368999999999999998643 6789999999999999999
Q ss_pred EEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCC
Q 001341 551 CLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 630 (1096)
Q Consensus 551 ~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD 630 (1096)
++|||.+..-..++ .-+..++.+|+||+|.|++.+..|++++++++|+.|++++++++|+|||
T Consensus 638 ALg~K~l~~~~~~q-----------------~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGD 700 (1160)
T KOG0209|consen 638 ALGYKPLGDMMVSQ-----------------VRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGD 700 (1160)
T ss_pred EEecccccccchhh-----------------hhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCC
Confidence 99999997321110 0112347899999999999999999999999999999999999999999
Q ss_pred cHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHH--HHHHHHH-HHHccccCC---CCCcEEEEEcChhHHHHHHHHHHH
Q 001341 631 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEV--CRSLERV-LLTMRITTS---EPKDVAFVVDGWALEIALKHYRKA 704 (1096)
Q Consensus 631 ~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~---~~~~~~lvi~g~~l~~~~~~~~~~ 704 (1096)
++.||.++|+++|+...... ++...+...+.. ....+.. .-.++.... --..+.+.++|..++.+...- .
T Consensus 701 npLTAchVak~v~iv~k~~~--vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~--~ 776 (1160)
T KOG0209|consen 701 NPLTACHVAKEVGIVEKPTL--VLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATD--Q 776 (1160)
T ss_pred CccchheehheeeeeccCce--eeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhH--H
Confidence 99999999999999765321 111111110000 0000000 000000000 112456789999998886642 1
Q ss_pred HhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchH------H----------
Q 001341 705 FTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL------Q---------- 768 (1096)
Q Consensus 705 f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~------~---------- 768 (1096)
. ........||||+.|+||..++..+|+.|+.++|+|||.||+.||++||||||+-.+..+ .
T Consensus 777 l--~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~ 854 (1160)
T KOG0209|consen 777 L--RRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEP 854 (1160)
T ss_pred H--HHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCc
Confidence 1 112345789999999999999999999999999999999999999999999987332210 0
Q ss_pred H------------------------------------------------Hhhcccccc-----ccchhhhH--HHhhchh
Q 001341 769 A------------------------------------------------ARAADYSIG-----KFRFLKRL--ILVHGRY 793 (1096)
Q Consensus 769 a------------------------------------------------~~~aD~vl~-----~f~~l~~l--ll~~GR~ 793 (1096)
+ .+-.|-.+. ....+..+ ++..||+
T Consensus 855 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRc 934 (1160)
T KOG0209|consen 855 AKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRC 934 (1160)
T ss_pred hhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcch
Confidence 0 000011111 00111111 3578999
Q ss_pred hhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhccCCCChhhhh-cCCcccccc
Q 001341 794 SYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVM-QHPQILFYC 872 (1096)
Q Consensus 794 ~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~d~~~~~~~-~~p~~y~~~ 872 (1096)
..-.. .+.||-+.++-..-.|+....+....=|...|.+.--+++.. .++..-+-.|-+.+- .+|.
T Consensus 935 tLVtT-----lQMfKILALN~LisAYslSvlyldGVKfgD~QaTisGlLla~---cFlfISrskPLetLSkeRP~----- 1001 (1160)
T KOG0209|consen 935 TLVTT-----LQMFKILALNCLISAYSLSVLYLDGVKFGDTQATISGLLLAA---CFLFISRSKPLETLSKERPL----- 1001 (1160)
T ss_pred hHHHH-----HHHHHHHHHHHHHHHHHHHHhhhcCceecchhHhHHHHHHHH---HHhheecCCchhhHhhcCCC-----
Confidence 88876 345566666544444444333333333677777654444332 222333334444444 4554
Q ss_pred ccCCccCchhHHHHHHHHHHHHHHHHHHhhhhccc
Q 001341 873 QAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAY 907 (1096)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 907 (1096)
-.+||...+...+++-..|-..+++++-.++..
T Consensus 1002 --~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~ 1034 (1160)
T KOG0209|consen 1002 --PNIFNVYIILSVLLQFAVHIATLVYITGEAYKL 1034 (1160)
T ss_pred --CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhc
Confidence 267888877777777777766666665555543
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-67 Score=582.10 Aligned_cols=595 Identities=19% Similarity=0.221 Sum_probs=431.6
Q ss_pred cccccCCCCceeecCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCc---cchhhHHHHHHHHHHHHHHHH
Q 001341 11 ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNP---ASTWGPLIFIFAVSATKEAWD 87 (1096)
Q Consensus 11 ~~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~---~~~~~~l~~i~~i~~i~~~~~ 87 (1096)
++|++.||.|++.++|.+.+ +.|+--|-+|..+..=..|++..... ...+. +..++.++..+++++...++|
T Consensus 43 ~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~La-ng~~~~~DW~DF~gI~~LLliNsti~Fve 117 (942)
T KOG0205|consen 43 EERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLA-NGGGRPPDWQDFVGICCLLLINSTISFIE 117 (942)
T ss_pred HHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHh-cCCCCCcchhhhhhhheeeeecceeeeee
Confidence 46999999999999887654 33444444555444334444443221 11111 223344555667788889999
Q ss_pred HHHHhh---hhHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEe
Q 001341 88 DYNRYL---SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKT 164 (1096)
Q Consensus 88 d~~r~~---~~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~ 164 (1096)
++++-. ++++-...+++|+|||+|.+++++.||||||+.++.||.||||++||+.. .+.||+|+|||||.|++
T Consensus 118 E~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD----~LkiDQSAlTGESLpvt 193 (942)
T KOG0205|consen 118 ENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD----PLKIDQSALTGESLPVT 193 (942)
T ss_pred ccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceecCC----ccccchhhhcCCccccc
Confidence 998754 45555678999999999999999999999999999999999999999765 39999999999999999
Q ss_pred eeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCc
Q 001341 165 RLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNE 244 (1096)
Q Consensus 165 K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~ 244 (1096)
| .+++.+|+||+++.|+ +.+||++||..
T Consensus 194 K---------------------------------------------------h~gd~vfSgSTcKqGE-~eaVViATg~~ 221 (942)
T KOG0205|consen 194 K---------------------------------------------------HPGDEVFSGSTCKQGE-IEAVVIATGVH 221 (942)
T ss_pred c---------------------------------------------------CCCCceecccccccce-EEEEEEEeccc
Confidence 9 3566799999999995 99999999999
Q ss_pred ccccccCC--CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcccchH
Q 001341 245 TKLGMTRG--IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIPIS 322 (1096)
Q Consensus 245 T~~~~~~~--~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~ 322 (1096)
|..|+-+. .......++++.++-+..++.+.+.+-.++...+. ++.. ...|.....-+ .+++..-||++
T Consensus 222 TF~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~~g~lie~~vm-y~~q------~R~~r~~i~nL--lvllIGgiPia 292 (942)
T KOG0205|consen 222 TFFGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIALGMLIEITVM-YPIQ------HRLYRDGIDNL--LVLLIGGIPIA 292 (942)
T ss_pred eeehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhh-hhhh------hhhhhhhhhhe--heeeecccccc
Confidence 99998665 23556789999999887665544433222222221 1110 11122111111 12344458999
Q ss_pred HH--HHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEE----EEEcCEeec
Q 001341 323 IK--VSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR----CCIGGIFYG 396 (1096)
Q Consensus 323 L~--vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~----~~~~~~~y~ 396 (1096)
|| ++..++-+.. ++.. +++.+++..++|+|+.+|++|||||||||.|++++.+ ++..|.
T Consensus 293 mPtVlsvTMAiGs~--------rLaq----qgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv--- 357 (942)
T KOG0205|consen 293 MPTVLSVTMAIGSH--------RLSQ----QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGV--- 357 (942)
T ss_pred cceeeeehhhHHHH--------HHHh----cccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCC---
Confidence 87 3444444433 2222 3477899999999999999999999999999999876 332221
Q ss_pred CCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEE
Q 001341 397 NETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIK 476 (1096)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~ 476 (1096)
+++-.-++.|+| . . .+..|..|.|++...++-
T Consensus 358 -------------------~~D~~~L~A~rA--s--r----------~en~DAID~A~v~~L~dP--------------- 389 (942)
T KOG0205|consen 358 -------------------DKDDVLLTAARA--S--R----------KENQDAIDAAIVGMLADP--------------- 389 (942)
T ss_pred -------------------ChHHHHHHHHHH--h--h----------hcChhhHHHHHHHhhcCH---------------
Confidence 112112222222 1 1 124577899998876431
Q ss_pred eCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCc-hHHHHHHHHHHHhccceEEEEEEE
Q 001341 477 FNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQ-TRTFVEAVEQYSQLGLRTLCLAWR 555 (1096)
Q Consensus 477 ~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~-~~~~~~~~~~~a~~GlR~l~~A~k 555 (1096)
.+.+..|+.++.+||++..||....+.++ +|+.+-.+||||+-|++.|+...+ +++..+.+++||++|+|-|++|++
T Consensus 390 -Keara~ikevhF~PFnPV~Krta~ty~d~-dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq 467 (942)
T KOG0205|consen 390 -KEARAGIKEVHFLPFNPVDKRTALTYIDP-DGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQ 467 (942)
T ss_pred -HHHhhCceEEeeccCCccccceEEEEECC-CCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhh
Confidence 13356788999999999999999999997 789999999999999999986544 578999999999999999999999
Q ss_pred ecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHH
Q 001341 556 EVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTA 635 (1096)
Q Consensus 556 ~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta 635 (1096)
..++..- +.-....+++|+.-+-||+|.+..++|+....-|+.|.|+|||...-+
T Consensus 468 ~v~e~~~-------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~ 522 (942)
T KOG0205|consen 468 EVPEKTK-------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIA 522 (942)
T ss_pred ccccccc-------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHH
Confidence 8776420 122356899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCC-eEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccce
Q 001341 636 IQIALSCNFISPEPKG-QLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRT 714 (1096)
Q Consensus 636 ~~ia~~~gl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~ 714 (1096)
+..++.+|+-.+-..+ .+.-.++.+. +.|...+. ...++
T Consensus 523 keTgrrlgmgtnmypss~llG~~~~~~---------------------------~~~~~v~e-------------lie~a 562 (942)
T KOG0205|consen 523 KETGRRLGMGTNMYPSSALLGLGKDGS---------------------------MPGSPVDE-------------LIEKA 562 (942)
T ss_pred HhhhhhhccccCcCCchhhccCCCCCC---------------------------CCCCcHHH-------------Hhhhc
Confidence 9999998885542210 0000000000 00000000 11236
Q ss_pred eEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHh-hccccccccchhhhH-HHhhch
Q 001341 715 AICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRL-ILVHGR 792 (1096)
Q Consensus 715 ~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~aD~vl~~f~~l~~l-ll~~GR 792 (1096)
.-|+.+.|++|.++|+.+|+.|+.++|+|||+||+|+++.||+||++. +.++|++ +||+|++......++ .+..+|
T Consensus 563 dgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava--~atdaar~asdiVltepglSviI~avltSr 640 (942)
T KOG0205|consen 563 DGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA--DATDAARSASDIVLTEPGLSVIISAVLTSR 640 (942)
T ss_pred cCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec--cchhhhcccccEEEcCCCchhhHHHHHHHH
Confidence 678999999999999999999999999999999999999999999993 3455776 889999986665544 357899
Q ss_pred hhhhhhhhhhhHhhh
Q 001341 793 YSYNRTAFLSQYSFY 807 (1096)
Q Consensus 793 ~~~~~i~~~i~~~~~ 807 (1096)
.+|+|......|.+.
T Consensus 641 aIfqrmknytiyavs 655 (942)
T KOG0205|consen 641 AIFQRMKNYTIYAVS 655 (942)
T ss_pred HHHHHHhhheeeeeh
Confidence 999998766555543
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-64 Score=606.89 Aligned_cols=451 Identities=31% Similarity=0.413 Sum_probs=370.3
Q ss_pred hhHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeeeccccccC
Q 001341 94 SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMG 173 (1096)
Q Consensus 94 ~~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~ 173 (1096)
.++.+++++++|+|+| ++.|++++|+|||+|.+++||.|||||+++ +|.+.||||+|||||.|+.|++
T Consensus 28 ~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl-----~g~~~vdes~LTGEs~pv~k~~------ 95 (499)
T TIGR01494 28 KDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLL-----SGSCFVDESNLTGESVPVLKTA------ 95 (499)
T ss_pred hhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEE-----EccEEEEcccccCCCCCeeecc------
Confidence 3444788999999999 999999999999999999999999999999 5569999999999999999942
Q ss_pred CCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCcccccccCC-
Q 001341 174 MDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG- 252 (1096)
Q Consensus 174 ~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~- 252 (1096)
++.+++|+.+.+| .....|..+|.+|..+++..
T Consensus 96 ---------------------------------------------g~~v~~gs~~~~G-~~~~~v~~~~~~s~~~~i~~~ 129 (499)
T TIGR01494 96 ---------------------------------------------GDAVFAGTYVFNG-TLIVVVSATGPNTFGGKIAVV 129 (499)
T ss_pred ---------------------------------------------CCccccCcEEecc-EEEEEEEEeccccHHHHHHHH
Confidence 4568899999988 68999999999998887543
Q ss_pred --CCCCCcCHHHHHHHHHH-HHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcccchHHHHHHHH
Q 001341 253 --IPEPKLTAVDAMIDKLT-GAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIPISIKVSLDL 329 (1096)
Q Consensus 253 --~~~~k~s~l~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~vtl~l 329 (1096)
.....++++++..+++. .+++++.++++++.++.+..+... ..+|...+ ..++.+++.++|++|++++++
T Consensus 130 v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~----~~~~~~~~---~~~~~vl~~~~P~aL~~~~~~ 202 (499)
T TIGR01494 130 VYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWD----PNSIFKIF---LRALILLVIAIPIALPLAVTI 202 (499)
T ss_pred HHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----cccHHHHH---HHHHHHHHHhcCCcHHHHHHH
Confidence 33444688899999988 566555555555444432211100 00243333 444558899999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCCccCCCchhhH
Q 001341 330 VKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLL 409 (1096)
Q Consensus 330 ~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~~~~~~~~~~~ 409 (1096)
+...+.. +|++. ++++|+++.+|+||+++++|||||||||+|+|+|++++..+.
T Consensus 203 ~~~~~~~------~~~~~----gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~---------------- 256 (499)
T TIGR01494 203 ALAVGDA------RLAKK----GIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG---------------- 256 (499)
T ss_pred HHHHHHH------HHHHC----CcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------
Confidence 8887754 45443 589999999999999999999999999999999999865321
Q ss_pred HhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEEEEEEEE
Q 001341 410 NAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILET 489 (1096)
Q Consensus 410 ~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~ 489 (1096)
++.++||.|.|++++++..+ +..
T Consensus 257 ---------------------------------~~~s~hp~~~ai~~~~~~~~------------------------~~~ 279 (499)
T TIGR01494 257 ---------------------------------EYLSGHPDERALVKSAKWKI------------------------LNV 279 (499)
T ss_pred ---------------------------------CcCCCChHHHHHHHHhhhcC------------------------cce
Confidence 02367999999999986411 246
Q ss_pred eccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCchHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHH
Q 001341 490 LEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 569 (1096)
Q Consensus 490 ~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~ 569 (1096)
.||++.+|+|+++++.. ++ .|+||+++.+.+.|.. +.+.+++++.+|+|++++|++
T Consensus 280 ~~f~~~~~~~~~~~~~~-~~---~~~~G~~~~i~~~~~~------~~~~~~~~~~~g~~~~~~a~~-------------- 335 (499)
T TIGR01494 280 FEFSSVRKRMSVIVRGP-DG---TYVKGAPEFVLSRVKD------LEEKVKELAQSGLRVLAVASK-------------- 335 (499)
T ss_pred eccCCCCceEEEEEecC-Cc---EEEeCCHHHHHHhhHH------HHHHHHHHHhCCCEEEEEEEC--------------
Confidence 79999999999999863 23 3789999999998752 445566788999999999953
Q ss_pred HHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCC
Q 001341 570 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP 649 (1096)
Q Consensus 570 ~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~ 649 (1096)
-+++|+++++|++|++++++|+.|+++|+++||+|||+..+|..+|+++|+
T Consensus 336 ------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi----- 386 (499)
T TIGR01494 336 ------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI----- 386 (499)
T ss_pred ------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-----
Confidence 269999999999999999999999999999999999999999999999986
Q ss_pred CCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHH
Q 001341 650 KGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV 729 (1096)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV 729 (1096)
+++++|++|+++|
T Consensus 387 -------------------------------------------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 387 -------------------------------------------------------------------FARVTPEEKAALV 399 (499)
T ss_pred -------------------------------------------------------------------eeccCHHHHHHHH
Confidence 2478999999999
Q ss_pred HHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccchhhhH-HHhhchhhhhhhhhhhhHhhhh
Q 001341 730 ELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYK 808 (1096)
Q Consensus 730 ~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k 808 (1096)
+.+|+.|+.|+|+|||.||+||+++|||||+| | ++.+||+++.++++.... ++.+||+.++++++.+.|.+++
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~-~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~ 473 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAM-G-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAY 473 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCcccc-c-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 4 677899999986554433 4789999999999999999999
Q ss_pred hHHHHHHHHH
Q 001341 809 SLLICFIQIF 818 (1096)
Q Consensus 809 ni~~~~~~~~ 818 (1096)
|+......++
T Consensus 474 n~~~~~~a~~ 483 (499)
T TIGR01494 474 NLILIPLAAL 483 (499)
T ss_pred HHHHHHHHHH
Confidence 9886555444
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-60 Score=568.60 Aligned_cols=489 Identities=20% Similarity=0.215 Sum_probs=378.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhh------hHhhcceEEEEEE-CCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCC
Q 001341 74 IFIFAVSATKEAWDDYNRYLS------DKKANEKEVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQ 146 (1096)
Q Consensus 74 ~~i~~i~~i~~~~~d~~r~~~------~~~~n~~~~~V~r-~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~ 146 (1096)
.+++++..+.+++|++.+.|+ +.++.++++++++ ||++++|+.++|+|||+|+|++||+||+||+++ +
T Consensus 178 a~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~-----~ 252 (713)
T COG2217 178 AMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVV-----S 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEE-----e
Confidence 344455566778888877553 4456788998877 555999999999999999999999999999999 6
Q ss_pred ceEEEEecccCCCCCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecc
Q 001341 147 GVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSC 226 (1096)
Q Consensus 147 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt 226 (1096)
|...||||+|||||.|+.| ..++.++.||
T Consensus 253 G~s~vDeS~iTGEs~PV~k---------------------------------------------------~~Gd~V~aGt 281 (713)
T COG2217 253 GSSSVDESMLTGESLPVEK---------------------------------------------------KPGDEVFAGT 281 (713)
T ss_pred CcEEeecchhhCCCCCEec---------------------------------------------------CCCCEEeeeE
Confidence 7899999999999999999 4567899999
Q ss_pred eeecCCeEEEEEEEecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHH
Q 001341 227 YLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYE 303 (1096)
Q Consensus 227 ~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 303 (1096)
.+.+| .....|+.+|.||.+.++.+ .++..++|+|+..|++..++.+..++++++.++++.++.. .+|..
T Consensus 282 iN~~G-~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~------~~~~~ 354 (713)
T COG2217 282 VNLDG-SLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGG------GDWET 354 (713)
T ss_pred EECCc-cEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC------CcHHH
Confidence 99998 79999999999999998765 6778889999999999999999888877777664433221 35666
Q ss_pred HhHhHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCce
Q 001341 304 LLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRM 383 (1096)
Q Consensus 304 ~~~~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m 383 (1096)
.+..+++ +++.++||+|.++...+.....- ...+.++++|+.+++|.|+++|+++||||||||+|++
T Consensus 355 a~~~a~a---vLVIaCPCALgLAtP~ai~~g~g----------~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p 421 (713)
T COG2217 355 ALYRALA---VLVIACPCALGLATPTAILVGIG----------RAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKP 421 (713)
T ss_pred HHHHHHh---heeeeCccHHHhHHHHHHHHHHH----------HHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCce
Confidence 6655554 78889999986665555444321 1123579999999999999999999999999999999
Q ss_pred EEEEEEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCe
Q 001341 384 IFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHM 463 (1096)
Q Consensus 384 ~v~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~ 463 (1096)
++.++...+. +..+++.. +.+- +..++||..+|++++|+..|.
T Consensus 422 ~v~~v~~~~~------------------------~e~~~L~l-aAal------------E~~S~HPiA~AIv~~a~~~~~ 464 (713)
T COG2217 422 EVTDVVALDG------------------------DEDELLAL-AAAL------------EQHSEHPLAKAIVKAAAERGL 464 (713)
T ss_pred EEEEEecCCC------------------------CHHHHHHH-HHHH------------HhcCCChHHHHHHHHHHhcCC
Confidence 9999864321 00122221 1111 123789999999999988762
Q ss_pred EEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCchHHHHHHHHHHH
Q 001341 464 VLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYS 543 (1096)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~~~~~~~~~~~~a 543 (1096)
.-. .. .+.+| .+-....+ +| ..+.-|.+..+.+.-.. .....+..+.+.
T Consensus 465 ~~~---------------~~---~~~i~----G~Gv~~~v----~g--~~v~vG~~~~~~~~~~~---~~~~~~~~~~~~ 513 (713)
T COG2217 465 PDV---------------ED---FEEIP----GRGVEAEV----DG--ERVLVGNARLLGEEGID---LPLLSERIEALE 513 (713)
T ss_pred CCc---------------cc---eeeec----cCcEEEEE----CC--EEEEEcCHHHHhhcCCC---ccchhhhHHHHH
Confidence 110 00 11111 12222212 33 23445777665432111 111556788889
Q ss_pred hccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCe
Q 001341 544 QLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGIN 623 (1096)
Q Consensus 544 ~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIk 623 (1096)
.+|..++.++ .|.+++|+++++|++|++++++|++||+.|++
T Consensus 514 ~~G~t~v~va--------------------------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~ 555 (713)
T COG2217 514 SEGKTVVFVA--------------------------------------VDGKLVGVIALADELRPDAKEAIAALKALGIK 555 (713)
T ss_pred hcCCeEEEEE--------------------------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCe
Confidence 9999988888 56799999999999999999999999999999
Q ss_pred EEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHH
Q 001341 624 FWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRK 703 (1096)
Q Consensus 624 v~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~ 703 (1096)
+.|+|||+..+|..+|+++||
T Consensus 556 ~~mLTGDn~~~A~~iA~~lGI----------------------------------------------------------- 576 (713)
T COG2217 556 VVMLTGDNRRTAEAIAKELGI----------------------------------------------------------- 576 (713)
T ss_pred EEEEcCCCHHHHHHHHHHcCh-----------------------------------------------------------
Confidence 999999999999999999999
Q ss_pred HHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccchh
Q 001341 704 AFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFL 783 (1096)
Q Consensus 704 ~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l 783 (1096)
..+.+++.|++|.++|+.+|+.|+.|+|+|||.||+|+|.+|||||+| |...+-|.++||++|++.+..
T Consensus 577 ----------d~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAm-G~GtDvA~eaADvvL~~~dL~ 645 (713)
T COG2217 577 ----------DEVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAM-GSGTDVAIEAADVVLMRDDLS 645 (713)
T ss_pred ----------HhheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEee-cCCcHHHHHhCCEEEecCCHH
Confidence 235678999999999999999999999999999999999999999999 663334455999999986664
Q ss_pred hhH-HHhhchhhhhhhhhhhhHhhhhhHHHHH
Q 001341 784 KRL-ILVHGRYSYNRTAFLSQYSFYKSLLICF 814 (1096)
Q Consensus 784 ~~l-ll~~GR~~~~~i~~~i~~~~~kni~~~~ 814 (1096)
... .+..+|..++++++.+.|.|..|+++..
T Consensus 646 ~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~ip 677 (713)
T COG2217 646 AVPEAIDLSRATRRIIKQNLFWAFGYNAIAIP 677 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444 3678999999999999998888876543
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-59 Score=579.08 Aligned_cols=483 Identities=17% Similarity=0.191 Sum_probs=370.7
Q ss_pred HHHHHHHHHHHHHHHHHhhh------hHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCce
Q 001341 75 FIFAVSATKEAWDDYNRYLS------DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (1096)
Q Consensus 75 ~i~~i~~i~~~~~d~~r~~~------~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~ 148 (1096)
+++++..+.+++|.+.+.|+ +.++.+.+++|+|||++++|++++|+|||+|+|++||+|||||+++ +|.
T Consensus 211 ~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi-----~g~ 285 (741)
T PRK11033 211 MVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLL-----SPF 285 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEE-----ECc
Confidence 33344455566666655443 3456788999999999999999999999999999999999999999 566
Q ss_pred EEEEecccCCCCCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeeccee
Q 001341 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (1096)
Q Consensus 149 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l 228 (1096)
+.||||+|||||.|+.| ..++.+++||.+
T Consensus 286 ~~vdes~lTGEs~Pv~k---------------------------------------------------~~Gd~V~aGt~~ 314 (741)
T PRK11033 286 ASFDESALTGESIPVER---------------------------------------------------ATGEKVPAGATS 314 (741)
T ss_pred EEeecccccCCCCCEec---------------------------------------------------CCCCeeccCCEE
Confidence 89999999999999999 346789999999
Q ss_pred ecCCeEEEEEEEecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHh
Q 001341 229 RNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELL 305 (1096)
Q Consensus 229 ~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (1096)
.+| .+.+.|+.+|.+|.++++.+ .++.+++|+++.+++++.++.+++++++++.++++.++. ..+|...+
T Consensus 315 ~~G-~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~------~~~~~~~i 387 (741)
T PRK11033 315 VDR-LVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF------AAPWQEWI 387 (741)
T ss_pred cCc-eEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------cCCHHHHH
Confidence 998 69999999999999998764 556678999999999999999888888877766542222 12455544
Q ss_pred HhHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEE
Q 001341 306 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 385 (1096)
Q Consensus 306 ~~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v 385 (1096)
...++ +++.++|++|.+...++...... .. .++++++|+.+++|.|+++++||||||||||+|+|+|
T Consensus 388 ~~a~s---vlviacPcaL~latP~a~~~~l~------~a----ar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v 454 (741)
T PRK11033 388 YRGLT---LLLIGCPCALVISTPAAITSGLA------AA----ARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQV 454 (741)
T ss_pred HHHHH---HHHHhchhhhhhhhHHHHHHHHH------HH----HHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEE
Confidence 44433 66778999984433333222111 00 1236999999999999999999999999999999999
Q ss_pred EEEEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEE
Q 001341 386 RRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 465 (1096)
Q Consensus 386 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~ 465 (1096)
.++...+.. . ..+++...+.. . ..+.||.+.|+++++++.+..
T Consensus 455 ~~~~~~~~~---------~--------------~~~~l~~aa~~---e----------~~s~hPia~Ai~~~a~~~~~~- 497 (741)
T PRK11033 455 TDIHPATGI---------S--------------ESELLALAAAV---E----------QGSTHPLAQAIVREAQVRGLA- 497 (741)
T ss_pred EEEEecCCC---------C--------------HHHHHHHHHHH---h----------cCCCCHHHHHHHHHHHhcCCC-
Confidence 998642210 0 01222222211 1 125799999999999876532
Q ss_pred eeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEE-EEEeCCCCeEEEEecChhhhhhhhhccCCchHHHHHHHHHHHh
Q 001341 466 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSV-VVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQ 544 (1096)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv-iv~~~~~~~~~l~~KGa~~~il~~~~~~~~~~~~~~~~~~~a~ 544 (1096)
+||.++++.+.- -++..-+|+.+ .-|+++.+.+ ..+.+.+.++++..
T Consensus 498 ------------------------~~~~~~~~~~~g~Gv~~~~~g~~~--~ig~~~~~~~------~~~~~~~~~~~~~~ 545 (741)
T PRK11033 498 ------------------------IPEAESQRALAGSGIEGQVNGERV--LICAPGKLPP------LADAFAGQINELES 545 (741)
T ss_pred ------------------------CCCCcceEEEeeEEEEEEECCEEE--EEecchhhhh------ccHHHHHHHHHHHh
Confidence 355556665531 12211134433 3478877654 12345667788999
Q ss_pred ccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeE
Q 001341 545 LGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINF 624 (1096)
Q Consensus 545 ~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv 624 (1096)
+|+|++++| .|.+++|+++++|++|++++++|+.|+++|+++
T Consensus 546 ~g~~~v~va--------------------------------------~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~ 587 (741)
T PRK11033 546 AGKTVVLVL--------------------------------------RNDDVLGLIALQDTLRADARQAISELKALGIKG 587 (741)
T ss_pred CCCEEEEEE--------------------------------------ECCEEEEEEEEecCCchhHHHHHHHHHHCCCEE
Confidence 999999999 467899999999999999999999999999999
Q ss_pred EEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHH
Q 001341 625 WMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKA 704 (1096)
Q Consensus 625 ~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~ 704 (1096)
+|+|||+..+|..+|+++||.
T Consensus 588 ~llTGd~~~~a~~ia~~lgi~----------------------------------------------------------- 608 (741)
T PRK11033 588 VMLTGDNPRAAAAIAGELGID----------------------------------------------------------- 608 (741)
T ss_pred EEEcCCCHHHHHHHHHHcCCC-----------------------------------------------------------
Confidence 999999999999999999992
Q ss_pred HhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccchhh
Q 001341 705 FTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLK 784 (1096)
Q Consensus 705 f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l~ 784 (1096)
.+++++|++|..+|+.+++. +.|+|+|||.||+||+++|||||+| |+..+.++++||+++.+.++..
T Consensus 609 -----------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~-g~~~~~a~~~adivl~~~~l~~ 675 (741)
T PRK11033 609 -----------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAM-GSGTDVALETADAALTHNRLRG 675 (741)
T ss_pred -----------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEe-cCCCHHHHHhCCEEEecCCHHH
Confidence 12357899999999999965 5899999999999999999999999 6655556679999998766543
Q ss_pred hH-HHhhchhhhhhhhhhhhHhhhhhHHH
Q 001341 785 RL-ILVHGRYSYNRTAFLSQYSFYKSLLI 812 (1096)
Q Consensus 785 ~l-ll~~GR~~~~~i~~~i~~~~~kni~~ 812 (1096)
.. ++..||.++.|+++.+.|.+..|+++
T Consensus 676 l~~~i~~sr~~~~~I~~nl~~a~~~n~~~ 704 (741)
T PRK11033 676 LAQMIELSRATHANIRQNITIALGLKAIF 704 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 46899999999999998887777643
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-58 Score=559.13 Aligned_cols=490 Identities=18% Similarity=0.190 Sum_probs=366.1
Q ss_pred HHHHHHHHHHHHHHHHHhhh---hHhhcceEEEEEECC-eEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEE
Q 001341 75 FIFAVSATKEAWDDYNRYLS---DKKANEKEVWVVKQG-IKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCY 150 (1096)
Q Consensus 75 ~i~~i~~i~~~~~d~~r~~~---~~~~n~~~~~V~r~g-~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~ 150 (1096)
+++++....+.++++|..+. ....++.+++|+|+| ++++|++++|+|||+|.|++||.|||||+|+ +|.+.
T Consensus 26 ~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi-----~g~~~ 100 (556)
T TIGR01525 26 FLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVI-----SGESE 100 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEE-----ecceE
Confidence 33334444455555444443 334567889999996 9999999999999999999999999999999 56689
Q ss_pred EEecccCCCCCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeec
Q 001341 151 VETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRN 230 (1096)
Q Consensus 151 Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~ 230 (1096)
||||+|||||.|+.| ..++.+++||.+.+
T Consensus 101 vdes~lTGEs~pv~k---------------------------------------------------~~g~~v~aGt~v~~ 129 (556)
T TIGR01525 101 VDESALTGESMPVEK---------------------------------------------------KEGDEVFAGTINGD 129 (556)
T ss_pred EeehhccCCCCCEec---------------------------------------------------CCcCEEeeceEECC
Confidence 999999999999998 34578999999998
Q ss_pred CCeEEEEEEEecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHh
Q 001341 231 TEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVI 307 (1096)
Q Consensus 231 ~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (1096)
| .+.++|+.||.+|.+|++.+ ..+.+++++++.+++++.++.++.++++++.++++.... .+ ..+.
T Consensus 130 g-~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~--------~~-~~~~- 198 (556)
T TIGR01525 130 G-SLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG--------AL-GALY- 198 (556)
T ss_pred c-eEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------cc-hHHH-
Confidence 8 69999999999999998754 345567999999999998888877777766665542211 11 2222
Q ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEE
Q 001341 308 PLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR 387 (1096)
Q Consensus 308 ~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~ 387 (1096)
.++.+++..+|++|++.+.++...... +|.+. ++++|+.+.+|.||+++++|||||||||+|+|++.+
T Consensus 199 --~~~~vlv~~~P~al~l~~~~~~~~~~~------~~~~~----gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~ 266 (556)
T TIGR01525 199 --RALAVLVVACPCALGLATPVAILVAIG------VAARR----GILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVD 266 (556)
T ss_pred --HHHHHHhhccccchhehhHHHHHHHHH------HHHHC----CceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEE
Confidence 233467778999998777666655544 33333 489999999999999999999999999999999999
Q ss_pred EEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEee
Q 001341 388 CCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVN 467 (1096)
Q Consensus 388 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~ 467 (1096)
+...+.... ...+++.. |..+. ....||.+.|+++++++.|.....
T Consensus 267 ~~~~~~~~~---------------------~~~~~l~~---a~~~e----------~~~~hp~~~Ai~~~~~~~~~~~~~ 312 (556)
T TIGR01525 267 VEPLDDASI---------------------SEEELLAL---AAALE----------QSSSHPLARAIVRYAKKRGLELPK 312 (556)
T ss_pred EEecCCCCc---------------------cHHHHHHH---HHHHh----------ccCCChHHHHHHHHHHhcCCCccc
Confidence 865322100 01122222 22211 125799999999999887643210
Q ss_pred eCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCchHHHHHHHHHHHhccc
Q 001341 468 KNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGL 547 (1096)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~~~~~~~~~~~~a~~Gl 547 (1096)
+ + ....+| .+.+...++ |. .-+..|+++.+ + . ........++.++.++.+|+
T Consensus 313 --~-------------~-~~~~~~----~~gi~~~~~----g~-~~~~lg~~~~~-~-~-~~~~~~~~~~~~~~~~~~g~ 364 (556)
T TIGR01525 313 --Q-------------E-DVEEVP----GKGVEATVD----GQ-EEVRIGNPRLL-E-L-AAEPISASPDLLNEGESQGK 364 (556)
T ss_pred --c-------------c-CeeEec----CCeEEEEEC----Ce-eEEEEecHHHH-h-h-cCCCchhhHHHHHHHhhCCc
Confidence 0 0 001111 122222221 21 12334555543 1 1 11122334466778899999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcC-CeEEE
Q 001341 548 RTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAG-INFWM 626 (1096)
Q Consensus 548 R~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aG-Ikv~m 626 (1096)
|++.+| .|.+++|.+.++|+++|+++++|+.|+++| ++++|
T Consensus 365 ~~~~v~--------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~i 406 (556)
T TIGR01525 365 TVVFVA--------------------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVM 406 (556)
T ss_pred EEEEEE--------------------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEE
Confidence 999998 567999999999999999999999999999 99999
Q ss_pred ECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHh
Q 001341 627 LTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFT 706 (1096)
Q Consensus 627 lTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~ 706 (1096)
+|||+..++..+++++|+.
T Consensus 407 vTgd~~~~a~~i~~~lgi~------------------------------------------------------------- 425 (556)
T TIGR01525 407 LTGDNRSAAEAVAAELGID------------------------------------------------------------- 425 (556)
T ss_pred EeCCCHHHHHHHHHHhCCC-------------------------------------------------------------
Confidence 9999999999999999991
Q ss_pred hhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccchhhhH
Q 001341 707 ELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 707 ~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l~~l 786 (1096)
.+++++.|++|.++++.++..++.|+|+|||.||++|+++||+||++ |.....++..||+++.+.++....
T Consensus 426 --------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~Ad~vi~~~~~~~l~ 496 (556)
T TIGR01525 426 --------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAM-GAGSDVAIEAADIVLLNDDLSSLP 496 (556)
T ss_pred --------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEe-CCCCHHHHHhCCEEEeCCCHHHHH
Confidence 24567799999999999999889999999999999999999999999 655555666999999975554433
Q ss_pred -HHhhchhhhhhhhhhhhHhhhhhHHHH
Q 001341 787 -ILVHGRYSYNRTAFLSQYSFYKSLLIC 813 (1096)
Q Consensus 787 -ll~~GR~~~~~i~~~i~~~~~kni~~~ 813 (1096)
++..||..++|+++.+.|.+..|++..
T Consensus 497 ~~i~~~r~~~~~i~~nl~~a~~~N~~~i 524 (556)
T TIGR01525 497 TAIDLSRKTRRIIKQNLAWALGYNLVAI 524 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368999999999999999988887654
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-57 Score=542.64 Aligned_cols=470 Identities=19% Similarity=0.228 Sum_probs=356.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh---hHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceE
Q 001341 73 LIFIFAVSATKEAWDDYNRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVC 149 (1096)
Q Consensus 73 l~~i~~i~~i~~~~~d~~r~~~---~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~ 149 (1096)
+++++.++...+.++++|..+. ..++++++++|+|||+++++++++|+|||+|.+++||.|||||+++ +|.+
T Consensus 24 i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii-----~g~~ 98 (536)
T TIGR01512 24 LLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVL-----SGTS 98 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEE-----eCcE
Confidence 3444445555566666555443 3455788999999999999999999999999999999999999999 5679
Q ss_pred EEEecccCCCCCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceee
Q 001341 150 YVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLR 229 (1096)
Q Consensus 150 ~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~ 229 (1096)
.||||+|||||.|+.|. .++.+|+||.+.
T Consensus 99 ~vdes~lTGEs~pv~k~---------------------------------------------------~g~~v~aGt~v~ 127 (536)
T TIGR01512 99 TVDESALTGESVPVEKA---------------------------------------------------PGDEVFAGAINL 127 (536)
T ss_pred EEEecccCCCCCcEEeC---------------------------------------------------CCCEEEeeeEEC
Confidence 99999999999999993 456899999999
Q ss_pred cCCeEEEEEEEecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhH
Q 001341 230 NTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLV 306 (1096)
Q Consensus 230 ~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 306 (1096)
+| .+.++|+.||.+|.+|++.+ ..+.+++++++.+++++.++.++.++++++.++.+.+.. .+...+
T Consensus 128 ~G-~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~- 197 (536)
T TIGR01512 128 DG-VLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--------RWPFWV- 197 (536)
T ss_pred Cc-eEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------ccHHHH-
Confidence 98 79999999999999998754 345567999999999999888887777766665543211 111122
Q ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEE
Q 001341 307 IPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFR 386 (1096)
Q Consensus 307 ~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~ 386 (1096)
...+.+++.++|++|++++.++...... ++.+ .++++|+.+.+|+||+++++|||||||||+|+|++.
T Consensus 198 --~~~~svlv~~~P~aL~la~~~~~~~~~~------~~~k----~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~ 265 (536)
T TIGR01512 198 --YRALVLLVVASPCALVISAPAAYLSAIS------AAAR----HGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVV 265 (536)
T ss_pred --HHHHHHHhhcCccccccchHHHHHHHHH------HHHH----CCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEE
Confidence 2233467789999987666666555443 3333 358999999999999999999999999999999999
Q ss_pred EEEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEe
Q 001341 387 RCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV 466 (1096)
Q Consensus 387 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~ 466 (1096)
++... +++...+.+. ..+.||.+.|+++++++.+ .+
T Consensus 266 ~~~~~-----------------------------~~l~~a~~~e-------------~~~~hp~~~Ai~~~~~~~~-~~- 301 (536)
T TIGR01512 266 DVVPA-----------------------------EVLRLAAAAE-------------QASSHPLARAIVDYARKRE-NV- 301 (536)
T ss_pred EeeHH-----------------------------HHHHHHHHHh-------------ccCCCcHHHHHHHHHHhcC-CC-
Confidence 87410 2222222111 1257999999999997654 00
Q ss_pred eeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCchHHHHHHHHHHHhcc
Q 001341 467 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLG 546 (1096)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~~~~~~~~~~~~a~~G 546 (1096)
. ....+| .+.+...+ +|+.+ ..|+++.+.+.. ...+..+|
T Consensus 302 -----------~-------~~~~~~----g~gi~~~~----~g~~~--~ig~~~~~~~~~------------~~~~~~~~ 341 (536)
T TIGR01512 302 -----------E-------SVEEVP----GEGVRAVV----DGGEV--RIGNPRSLEAAV------------GARPESAG 341 (536)
T ss_pred -----------c-------ceEEec----CCeEEEEE----CCeEE--EEcCHHHHhhcC------------CcchhhCC
Confidence 0 011111 12222222 23332 347765442210 11556778
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCC-eEE
Q 001341 547 LRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGI-NFW 625 (1096)
Q Consensus 547 lR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGI-kv~ 625 (1096)
.+++.++ .|..++|.+.++|+++|+++++|+.|+++|+ +++
T Consensus 342 ~~~~~v~--------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~ 383 (536)
T TIGR01512 342 KTIVHVA--------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVV 383 (536)
T ss_pred CeEEEEE--------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEE
Confidence 8887766 6789999999999999999999999999999 999
Q ss_pred EECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHH
Q 001341 626 MLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAF 705 (1096)
Q Consensus 626 mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f 705 (1096)
|+|||+..+|..+++++|+.
T Consensus 384 vvTgd~~~~a~~i~~~lgi~------------------------------------------------------------ 403 (536)
T TIGR01512 384 MLTGDRRAVAERVARELGID------------------------------------------------------------ 403 (536)
T ss_pred EEcCCCHHHHHHHHHHcCCh------------------------------------------------------------
Confidence 99999999999999999992
Q ss_pred hhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecC-CchHHHHhhccccccccch--
Q 001341 706 TELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAARAADYSIGKFRF-- 782 (1096)
Q Consensus 706 ~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g-~~~~~a~~~aD~vl~~f~~-- 782 (1096)
.+++++.|++|..+++.++..++.|+|+|||.||++|+++||+||++ | .....++.+||+++.+.++
T Consensus 404 ---------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~~ad~vl~~~~l~~ 473 (536)
T TIGR01512 404 ---------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAM-GASGSDVAIETADVVLLNDDLSR 473 (536)
T ss_pred ---------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEe-CCCccHHHHHhCCEEEECCCHHH
Confidence 12456789999999999999999999999999999999999999999 5 4444566699999965444
Q ss_pred hhhHHHhhchhhhhhhhhhhhHhhhhhHHHH
Q 001341 783 LKRLILVHGRYSYNRTAFLSQYSFYKSLLIC 813 (1096)
Q Consensus 783 l~~lll~~GR~~~~~i~~~i~~~~~kni~~~ 813 (1096)
+.. ++..||.+++++++.+.|.+..|++..
T Consensus 474 l~~-~i~~~r~~~~~i~~nl~~a~~~n~~~i 503 (536)
T TIGR01512 474 LPQ-AIRLARRTRRIVKQNVVIALGIILLLI 503 (536)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444 368999999999999988887776543
|
. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-57 Score=526.22 Aligned_cols=497 Identities=18% Similarity=0.209 Sum_probs=380.3
Q ss_pred HHHHHHHHHHHhhh------hHhhcceEEEEEECCe-EEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEe
Q 001341 81 ATKEAWDDYNRYLS------DKKANEKEVWVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVET 153 (1096)
Q Consensus 81 ~i~~~~~d~~r~~~------~~~~n~~~~~V~r~g~-~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vde 153 (1096)
.+..+.|...++|+ +..+.+.++.++.+|+ .++|+.+.|++||+|.|.||++||+||+++ +|.++|||
T Consensus 352 ~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv-----~Gss~VDE 426 (951)
T KOG0207|consen 352 TLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVV-----DGSSEVDE 426 (951)
T ss_pred HHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEE-----eCceeech
Confidence 34466666666553 3456788999999997 899999999999999999999999999999 78899999
Q ss_pred cccCCCCCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCe
Q 001341 154 AALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEW 233 (1096)
Q Consensus 154 s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~ 233 (1096)
|.+|||+.|+.|+ .+..+..||.+.|| .
T Consensus 427 s~iTGEs~PV~Kk---------------------------------------------------~gs~ViaGsiN~nG-~ 454 (951)
T KOG0207|consen 427 SLITGESMPVPKK---------------------------------------------------KGSTVIAGSINLNG-T 454 (951)
T ss_pred hhccCCceecccC---------------------------------------------------CCCeeeeeeecCCc-e
Confidence 9999999999994 56789999999998 7
Q ss_pred EEEEEEEecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHH
Q 001341 234 ACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLR 310 (1096)
Q Consensus 234 ~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (1096)
.+.-++.+|.||.++++.+ +++..+.|+|+.+|+++.++.++++++++..+++|.+...........|...+...+.
T Consensus 455 l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~ 534 (951)
T KOG0207|consen 455 LLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQ 534 (951)
T ss_pred EEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHH
Confidence 8999999999999998865 6777889999999999999999988888777766544332222222233444444444
Q ss_pred HHH-HhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEE
Q 001341 311 FEL-LCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCC 389 (1096)
Q Consensus 311 ~~~-l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~ 389 (1096)
+.+ +++.++|++|.+....|..+.. .....+++++|..+.+|.+.+|+++.||||||||+|+++|.++.
T Consensus 535 ~aisVlviACPCaLgLATPtAvmvat----------gvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~ 604 (951)
T KOG0207|consen 535 LAISVLVIACPCALGLATPTAVMVAT----------GVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFK 604 (951)
T ss_pred hhheEEEEECchhhhcCCceEEEEEe----------chhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEE
Confidence 444 6788999998655443322210 01123479999999999999999999999999999999999987
Q ss_pred EcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeC
Q 001341 390 IGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKN 469 (1096)
Q Consensus 390 ~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~ 469 (1096)
.-+.. -...+++...+.- . -.++||...|++++|++.+...
T Consensus 605 ~~~~~----------------------~~~~e~l~~v~a~---E----------s~SeHPig~AIv~yak~~~~~~---- 645 (951)
T KOG0207|consen 605 SLSNP----------------------ISLKEALALVAAM---E----------SGSEHPIGKAIVDYAKEKLVEP---- 645 (951)
T ss_pred ecCCc----------------------ccHHHHHHHHHHH---h----------cCCcCchHHHHHHHHHhccccc----
Confidence 54321 0112233222211 1 2368999999999999876111
Q ss_pred CcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCchHHHHHHHHHHHhccceE
Q 001341 470 ASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRT 549 (1096)
Q Consensus 470 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~~~~~~~~~~~~a~~GlR~ 549 (1096)
+. -.++..-.|..+.+...+.+. ++. .+-|.-+-+...-. ...+++++.+++....|..+
T Consensus 646 -~~-----------~~~~~~~~~pg~g~~~~~~~~----~~~--i~iGN~~~~~r~~~--~~~~~i~~~~~~~e~~g~tv 705 (951)
T KOG0207|consen 646 -NP-----------EGVLSFEYFPGEGIYVTVTVD----GNE--VLIGNKEWMSRNGC--SIPDDILDALTESERKGQTV 705 (951)
T ss_pred -Cc-----------cccceeecccCCCcccceEEe----eeE--EeechHHHHHhcCC--CCchhHHHhhhhHhhcCceE
Confidence 00 011122233333333222222 222 33466555443211 12456888899999999999
Q ss_pred EEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECC
Q 001341 550 LCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTG 629 (1096)
Q Consensus 550 l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTG 629 (1096)
.++| .|.++.|+++++|++|+|+..+|+.|++.||++.|+||
T Consensus 706 v~v~--------------------------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTG 747 (951)
T KOG0207|consen 706 VYVA--------------------------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTG 747 (951)
T ss_pred EEEE--------------------------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcC
Confidence 9999 68899999999999999999999999999999999999
Q ss_pred CcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhh
Q 001341 630 DKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELA 709 (1096)
Q Consensus 630 D~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~ 709 (1096)
|+..+|.++|+++|+
T Consensus 748 Dn~~aA~svA~~VGi----------------------------------------------------------------- 762 (951)
T KOG0207|consen 748 DNDAAARSVAQQVGI----------------------------------------------------------------- 762 (951)
T ss_pred CCHHHHHHHHHhhCc-----------------------------------------------------------------
Confidence 999999999999996
Q ss_pred hccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccchhhhH-HH
Q 001341 710 ILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-IL 788 (1096)
Q Consensus 710 ~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l~~l-ll 788 (1096)
..|+|++.|+||.++|+.+|+.+..|+|+|||.||+|+|.+|||||+| |....-|.++||++|++.+....+ .+
T Consensus 763 ----~~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIai-g~gs~vAieaADIVLmrn~L~~v~~ai 837 (951)
T KOG0207|consen 763 ----DNVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAI-GAGSDVAIEAADIVLMRNDLRDVPFAI 837 (951)
T ss_pred ----ceEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceee-ccccHHHHhhCCEEEEccchhhhHHHH
Confidence 468899999999999999999999999999999999999999999999 655555677999999987665544 35
Q ss_pred hhchhhhhhhhhhhhHhhhhhHH
Q 001341 789 VHGRYSYNRTAFLSQYSFYKSLL 811 (1096)
Q Consensus 789 ~~GR~~~~~i~~~i~~~~~kni~ 811 (1096)
...|+...|++..+.|.+.+|++
T Consensus 838 ~LSrkt~~rIk~N~~~A~~yn~~ 860 (951)
T KOG0207|consen 838 DLSRKTVKRIKLNFVWALIYNLV 860 (951)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHh
Confidence 68999999999888888777765
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-56 Score=533.31 Aligned_cols=471 Identities=19% Similarity=0.225 Sum_probs=355.4
Q ss_pred HHHHHHHHHHHHHHHhhh------hHhhcceEEEEEEC-CeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceE
Q 001341 77 FAVSATKEAWDDYNRYLS------DKKANEKEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVC 149 (1096)
Q Consensus 77 ~~i~~i~~~~~d~~r~~~------~~~~n~~~~~V~r~-g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~ 149 (1096)
+++..+.+++|++.++|+ +.++.+.+++++|+ |.+++|+.++|+|||+|+|++||.|||||+++ +|.+
T Consensus 61 ~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~-----~g~~ 135 (562)
T TIGR01511 61 ITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVI-----EGES 135 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEE-----ECce
Confidence 333444556666654443 34556789999985 66799999999999999999999999999999 5779
Q ss_pred EEEecccCCCCCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceee
Q 001341 150 YVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLR 229 (1096)
Q Consensus 150 ~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~ 229 (1096)
.||||+|||||.|+.|+ .++.+|+||.+.
T Consensus 136 ~vdes~lTGEs~pv~k~---------------------------------------------------~gd~V~aGt~~~ 164 (562)
T TIGR01511 136 EVDESLVTGESLPVPKK---------------------------------------------------VGDPVIAGTVNG 164 (562)
T ss_pred EEehHhhcCCCCcEEcC---------------------------------------------------CCCEEEeeeEEC
Confidence 99999999999999993 457899999999
Q ss_pred cCCeEEEEEEEecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhH
Q 001341 230 NTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLV 306 (1096)
Q Consensus 230 ~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 306 (1096)
+| .+...|+.||.+|.++++.+ .++.+++++++.+++++.++.+++++++++.++.+ ...+.
T Consensus 165 ~g-~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~--------------~~~~~ 229 (562)
T TIGR01511 165 TG-SLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIW--------------LFALE 229 (562)
T ss_pred Cc-eEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHH
Confidence 98 79999999999999998765 44556799999999999988887777666555432 11222
Q ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEE
Q 001341 307 IPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFR 386 (1096)
Q Consensus 307 ~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~ 386 (1096)
..+.+++.++|++|++...++...... ++.+ .++++|+.+.+|.|+++++||||||||||+|+|++.
T Consensus 230 ---~~~svlvvacPcaL~la~p~a~~~~~~------~aa~----~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~ 296 (562)
T TIGR01511 230 ---FAVTVLIIACPCALGLATPTVIAVATG------LAAK----NGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVT 296 (562)
T ss_pred ---HHHHHHHHhccchhhhHHHHHHHHHHH------HHHH----CCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEE
Confidence 233377888999987666666555433 2222 358999999999999999999999999999999999
Q ss_pred EEEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEe
Q 001341 387 RCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV 466 (1096)
Q Consensus 387 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~ 466 (1096)
++...+.. + ..+++...+ .+. ..+.||.+.|+++++++.+....
T Consensus 297 ~i~~~~~~---------------------~--~~~~l~~aa---~~e----------~~s~HPia~Ai~~~~~~~~~~~~ 340 (562)
T TIGR01511 297 DVHVFGDR---------------------D--RTELLALAA---ALE----------AGSEHPLAKAIVSYAKEKGITLV 340 (562)
T ss_pred EEecCCCC---------------------C--HHHHHHHHH---HHh----------ccCCChHHHHHHHHHHhcCCCcC
Confidence 87532210 0 012222221 111 12579999999999987764321
Q ss_pred eeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCchHHHHHHHHHHHhcc
Q 001341 467 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLG 546 (1096)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~~~~~~~~~~~~a~~G 546 (1096)
. ...+ +.+ ..+.+...+ +|+ -+..|+++.+.+.- .. +..+.++|
T Consensus 341 ~-------------~~~~---~~~----~g~Gi~~~~----~g~--~~~iG~~~~~~~~~---~~-------~~~~~~~g 384 (562)
T TIGR01511 341 E-------------VSDF---KAI----PGIGVEGTV----EGT--KIQLGNEKLLGENA---IK-------IDGKAEQG 384 (562)
T ss_pred C-------------CCCe---EEE----CCceEEEEE----CCE--EEEEECHHHHHhCC---CC-------CChhhhCC
Confidence 0 0000 111 123333333 232 24568877653311 00 11245789
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEE
Q 001341 547 LRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWM 626 (1096)
Q Consensus 547 lR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~m 626 (1096)
.+++.++ .|.+++|.++++|+++|+++++|+.|++.|++++|
T Consensus 385 ~~~~~~~--------------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~i 426 (562)
T TIGR01511 385 STSVLVA--------------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVM 426 (562)
T ss_pred CEEEEEE--------------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEE
Confidence 9988877 68899999999999999999999999999999999
Q ss_pred ECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHh
Q 001341 627 LTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFT 706 (1096)
Q Consensus 627 lTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~ 706 (1096)
+|||+..+|..+++++|+.
T Consensus 427 lSgd~~~~a~~ia~~lgi~------------------------------------------------------------- 445 (562)
T TIGR01511 427 LTGDNRKTAKAVAKELGIN------------------------------------------------------------- 445 (562)
T ss_pred EcCCCHHHHHHHHHHcCCc-------------------------------------------------------------
Confidence 9999999999999999981
Q ss_pred hhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccch--hh
Q 001341 707 ELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF--LK 784 (1096)
Q Consensus 707 ~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~--l~ 784 (1096)
+++++.|++|.++++.+++.++.|+|+|||.||++|+++||+||+| |...+.++.+||+++.+.+. +.
T Consensus 446 ---------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~-g~g~~~a~~~Advvl~~~~l~~l~ 515 (562)
T TIGR01511 446 ---------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAI-GAGTDVAIEAADVVLMRNDLNDVA 515 (562)
T ss_pred ---------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEe-CCcCHHHHhhCCEEEeCCCHHHHH
Confidence 3456789999999999999999999999999999999999999999 65444456699999985443 33
Q ss_pred hHHHhhchhhhhhhhhhhhHhhhhhHHHH
Q 001341 785 RLILVHGRYSYNRTAFLSQYSFYKSLLIC 813 (1096)
Q Consensus 785 ~lll~~GR~~~~~i~~~i~~~~~kni~~~ 813 (1096)
. ++..||..++++++.+.|.+..|++..
T Consensus 516 ~-~i~lsr~~~~~i~qn~~~a~~~n~~~i 543 (562)
T TIGR01511 516 T-AIDLSRKTLRRIKQNLLWAFGYNVIAI 543 (562)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 358999999999999988888777543
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-54 Score=548.73 Aligned_cols=488 Identities=19% Similarity=0.202 Sum_probs=371.7
Q ss_pred HHHHHHHHHHHHHHHHHhhh------hHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCce
Q 001341 75 FIFAVSATKEAWDDYNRYLS------DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (1096)
Q Consensus 75 ~i~~i~~i~~~~~d~~r~~~------~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~ 148 (1096)
+++++..+.+++|++-+.++ +.++.+++++|+|+|++++|+.++|+|||+|.|++||+|||||+++ +|.
T Consensus 291 ~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~-----~g~ 365 (834)
T PRK10671 291 MIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT-----QGE 365 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE-----Ece
Confidence 33344455577777766553 3455678999999999999999999999999999999999999999 577
Q ss_pred EEEEecccCCCCCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeeccee
Q 001341 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (1096)
Q Consensus 149 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l 228 (1096)
+.||||+|||||.|+.| ..++.+++||.+
T Consensus 366 ~~vdeS~lTGEs~pv~k---------------------------------------------------~~gd~V~aGt~~ 394 (834)
T PRK10671 366 AWLDEAMLTGEPIPQQK---------------------------------------------------GEGDSVHAGTVV 394 (834)
T ss_pred EEEeehhhcCCCCCEec---------------------------------------------------CCCCEEEeccee
Confidence 99999999999999999 345789999999
Q ss_pred ecCCeEEEEEEEecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHh
Q 001341 229 RNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELL 305 (1096)
Q Consensus 229 ~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (1096)
.+| .+.+.|+.+|.+|.++++.+ .++..++++++.+++++.++.+++++++++.++++.+. .. ...|...+
T Consensus 395 ~~G-~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~-~~----~~~~~~~~ 468 (834)
T PRK10671 395 QDG-SVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF-GP----APQIVYTL 468 (834)
T ss_pred cce-eEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CC----chHHHHHH
Confidence 998 79999999999999998754 44556789999999999988888777776665543221 10 01122222
Q ss_pred HhHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEE
Q 001341 306 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 385 (1096)
Q Consensus 306 ~~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v 385 (1096)
..+ +.+++.++|++|++...++...... ++. +.++++|+.+.+|+||+++++|||||||||+|+|++
T Consensus 469 ~~a---~~vlv~acPcaL~la~p~a~~~~~~------~~a----~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v 535 (834)
T PRK10671 469 VIA---TTVLIIACPCALGLATPMSIISGVG------RAA----EFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQV 535 (834)
T ss_pred HHH---HHHHHHhcccchhhhHHHHHHHHHH------HHH----HCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEE
Confidence 222 3377888999987766666555433 232 235999999999999999999999999999999999
Q ss_pred EEEEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHH-HHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeE
Q 001341 386 RRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLT-VMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMV 464 (1096)
Q Consensus 386 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~ 464 (1096)
.++...+.. . ..+++. +.+++. .+.||.+.|+++++...+..
T Consensus 536 ~~~~~~~~~---------~--------------~~~~l~~a~~~e~--------------~s~hp~a~Ai~~~~~~~~~~ 578 (834)
T PRK10671 536 VAVKTFNGV---------D--------------EAQALRLAAALEQ--------------GSSHPLARAILDKAGDMTLP 578 (834)
T ss_pred EEEEccCCC---------C--------------HHHHHHHHHHHhC--------------CCCCHHHHHHHHHHhhCCCC
Confidence 987532110 0 012222 222221 25799999999988643210
Q ss_pred EeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCchHHHHHHHHHHHh
Q 001341 465 LVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQ 544 (1096)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~~~~~~~~~~~~a~ 544 (1096)
....++.. | .+.+...+ +|+. +.+|+++.+.... ...+.+.+.+++++.
T Consensus 579 ---------------~~~~~~~~---~----g~Gv~~~~----~g~~--~~~G~~~~~~~~~---~~~~~~~~~~~~~~~ 627 (834)
T PRK10671 579 ---------------QVNGFRTL---R----GLGVSGEA----EGHA--LLLGNQALLNEQQ---VDTKALEAEITAQAS 627 (834)
T ss_pred ---------------CcccceEe---c----ceEEEEEE----CCEE--EEEeCHHHHHHcC---CChHHHHHHHHHHHh
Confidence 00111110 0 11222222 3433 4569988764321 123456677888899
Q ss_pred ccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeE
Q 001341 545 LGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINF 624 (1096)
Q Consensus 545 ~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv 624 (1096)
+|.+++.+| .|..++|+++++|++||+++++|+.|++.|+++
T Consensus 628 ~g~~~v~va--------------------------------------~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v 669 (834)
T PRK10671 628 QGATPVLLA--------------------------------------VDGKAAALLAIRDPLRSDSVAALQRLHKAGYRL 669 (834)
T ss_pred CCCeEEEEE--------------------------------------ECCEEEEEEEccCcchhhHHHHHHHHHHCCCeE
Confidence 999999998 456799999999999999999999999999999
Q ss_pred EEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHH
Q 001341 625 WMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKA 704 (1096)
Q Consensus 625 ~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~ 704 (1096)
+|+|||+..+|..+++++|+.
T Consensus 670 ~~~Tgd~~~~a~~ia~~lgi~----------------------------------------------------------- 690 (834)
T PRK10671 670 VMLTGDNPTTANAIAKEAGID----------------------------------------------------------- 690 (834)
T ss_pred EEEcCCCHHHHHHHHHHcCCC-----------------------------------------------------------
Confidence 999999999999999999982
Q ss_pred HhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccchhh
Q 001341 705 FTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLK 784 (1096)
Q Consensus 705 f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l~ 784 (1096)
.+++++.|++|.++++.++..++.|+|+|||.||++|++.||+||+| |+..+.++++||+++.+.++-.
T Consensus 691 ----------~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~-g~g~~~a~~~ad~vl~~~~~~~ 759 (834)
T PRK10671 691 ----------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM-GGGSDVAIETAAITLMRHSLMG 759 (834)
T ss_pred ----------EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe-cCCCHHHHHhCCEEEecCCHHH
Confidence 24567889999999999999999999999999999999999999999 7766677789999998766544
Q ss_pred hH-HHhhchhhhhhhhhhhhHhhhhhHHHH
Q 001341 785 RL-ILVHGRYSYNRTAFLSQYSFYKSLLIC 813 (1096)
Q Consensus 785 ~l-ll~~GR~~~~~i~~~i~~~~~kni~~~ 813 (1096)
.. ++..||..+.++++.+.|.+..|++..
T Consensus 760 i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i 789 (834)
T PRK10671 760 VADALAISRATLRNMKQNLLGAFIYNSLGI 789 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 367899999999999999988887654
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-48 Score=418.61 Aligned_cols=468 Identities=22% Similarity=0.257 Sum_probs=335.9
Q ss_pred EEEEEEC-CeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeeeccccccCCCHhhhc
Q 001341 102 EVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180 (1096)
Q Consensus 102 ~~~V~r~-g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~ 180 (1096)
.++++++ |.++.+++.+|+.||+|+++.||.||+||-++ +|..+||||++||||.|+.|.+.-
T Consensus 105 ~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVI-----eG~asVdESAITGESaPViresGg----------- 168 (681)
T COG2216 105 IARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVI-----EGVASVDESAITGESAPVIRESGG----------- 168 (681)
T ss_pred HHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEE-----eeeeecchhhccCCCcceeeccCC-----------
Confidence 4666665 89999999999999999999999999999999 788999999999999999996531
Q ss_pred cceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCcccccccC---CCCCCC
Q 001341 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR---GIPEPK 257 (1096)
Q Consensus 181 ~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~---~~~~~k 257 (1096)
.-..+--||.+.+. |....++..-.+|.+-+.. ..++.+
T Consensus 169 -------------------------------------D~ssVtGgT~v~SD-~l~irita~pG~sFlDrMI~LVEgA~R~ 210 (681)
T COG2216 169 -------------------------------------DFSSVTGGTRVLSD-WLKIRITANPGETFLDRMIALVEGAERQ 210 (681)
T ss_pred -------------------------------------CcccccCCcEEeee-eEEEEEEcCCCccHHHHHHHHhhchhcc
Confidence 11235568888875 9999998888888777643 355666
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Q 001341 258 LTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKF 337 (1096)
Q Consensus 258 ~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~ 337 (1096)
+||=|.-++.+...+.++.++....+.-+. .|.. ...... ...+.|++.+||....--++..-....-
T Consensus 211 KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a-~y~~-----g~~~~i-----~~LiALlV~LIPTTIGgLLsAIGIAGMd- 278 (681)
T COG2216 211 KTPNEIALTILLSGLTLIFLLAVATLYPFA-IYSG-----GGAASV-----TVLVALLVCLIPTTIGGLLSAIGIAGMD- 278 (681)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhhhHH-HHcC-----CCCcCH-----HHHHHHHHHHhcccHHHHHHHhhhhhhh-
Confidence 688888777654433333222111111111 1110 001111 1112377888998653222222111110
Q ss_pred HhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCCccCCCchhhHHhhhcCCh
Q 001341 338 IDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 417 (1096)
Q Consensus 338 i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 417 (1096)
++ .+..+..++..++|..|.||++..|||||+|-|+=.-.++...+ ..
T Consensus 279 -----Rv----~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~-----------------------gv 326 (681)
T COG2216 279 -----RV----TQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVP-----------------------GV 326 (681)
T ss_pred -----Hh----hhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCC-----------------------CC
Confidence 12 22247889999999999999999999999999864433332111 11
Q ss_pred hHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCc
Q 001341 418 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRK 497 (1096)
Q Consensus 418 ~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rk 497 (1096)
+..++..+..+++- .-+.|.-..+++.|++.|+....+.. . .....+||+.+.|
T Consensus 327 ~~~~la~aa~lsSl-------------~DeTpEGrSIV~LA~~~~~~~~~~~~----------~---~~~~fvpFtA~TR 380 (681)
T COG2216 327 SEEELADAAQLASL-------------ADETPEGRSIVELAKKLGIELREDDL----------Q---SHAEFVPFTAQTR 380 (681)
T ss_pred CHHHHHHHHHHhhh-------------ccCCCCcccHHHHHHHhccCCCcccc----------c---ccceeeecceecc
Confidence 23344444444431 13568889999999998854422110 0 0235689998887
Q ss_pred eeEEEEEeCCCCeEEEEecChhhhhhhhhccC--CchHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhh
Q 001341 498 RMSVVVKDCHSGNISLLSKGADEAILPYAHAG--QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASST 575 (1096)
Q Consensus 498 rmsviv~~~~~~~~~l~~KGa~~~il~~~~~~--~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~ 575 (1096)
++.+-.. ++ .-+-|||.+.+....+.. +-++.++..+++-++.|-..|+++
T Consensus 381 mSGvd~~---~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~---------------------- 433 (681)
T COG2216 381 MSGVDLP---GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVV---------------------- 433 (681)
T ss_pred cccccCC---CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEE----------------------
Confidence 7666554 23 457799999999988743 346889999999999999999998
Q ss_pred hchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEE
Q 001341 576 LIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS 655 (1096)
Q Consensus 576 ~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~ 655 (1096)
.|-.++|++.++|-+++|.+|-+.+||+.|||.+|+||||+.||..||.+.|+..
T Consensus 434 ----------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd--------- 488 (681)
T COG2216 434 ----------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD--------- 488 (681)
T ss_pred ----------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh---------
Confidence 6889999999999999999999999999999999999999999999999999821
Q ss_pred EcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhc
Q 001341 656 IDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC 735 (1096)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~ 735 (1096)
..++++|++|.++++.-|..
T Consensus 489 ------------------------------------------------------------fiAeatPEdK~~~I~~eQ~~ 508 (681)
T COG2216 489 ------------------------------------------------------------FIAEATPEDKLALIRQEQAE 508 (681)
T ss_pred ------------------------------------------------------------hhhcCChHHHHHHHHHHHhc
Confidence 23578999999999999999
Q ss_pred CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHh-hccccccccchhhhH-HHhhchhhhhhhhhhhhHhhh
Q 001341 736 DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFY 807 (1096)
Q Consensus 736 ~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~aD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~ 807 (1096)
|+.|+|+|||.||+|+|.+||||+|| |.|+||++ ++++|=.|-+.-+.+ ++.-|++..-.--.+..|++.
T Consensus 509 grlVAMtGDGTNDAPALAqAdVg~AM--NsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIA 580 (681)
T COG2216 509 GRLVAMTGDGTNDAPALAQADVGVAM--NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIA 580 (681)
T ss_pred CcEEEEcCCCCCcchhhhhcchhhhh--ccccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeehh
Confidence 99999999999999999999999999 66677665 889987776654433 234566655433333334443
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=265.47 Aligned_cols=222 Identities=24% Similarity=0.396 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHhhc---ceE-EEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCce
Q 001341 73 LIFIFAVSATKEAWDDYNRYLSDKKAN---EKE-VWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (1096)
Q Consensus 73 l~~i~~i~~i~~~~~d~~r~~~~~~~n---~~~-~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~ 148 (1096)
++++++++.+.+.++++|+++..++++ +++ ++|+|||++++++|+||+|||||+|++||.+||||++++ +|.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g~ 77 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SGS 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SSE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee----ccc
Confidence 456677788889999999988877664 344 999999999999999999999999999999999999995 377
Q ss_pred EEEEecccCCCCCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeeccee
Q 001341 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (1096)
Q Consensus 149 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l 228 (1096)
++||||+||||+.|+.|.+. +.+.+|++++||.+
T Consensus 78 ~~vd~s~ltGes~pv~k~~~----------------------------------------------~~~~~~~i~~Gs~v 111 (230)
T PF00122_consen 78 AYVDESALTGESEPVKKTPL----------------------------------------------PLNPGNIIFAGSIV 111 (230)
T ss_dssp EEEECHHHHSBSSEEEESSS----------------------------------------------CCCTTTEE-TTEEE
T ss_pred cccccccccccccccccccc----------------------------------------------cccccchhhccccc
Confidence 99999999999999999532 23688999999999
Q ss_pred ecCCeEEEEEEEecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHh
Q 001341 229 RNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELL 305 (1096)
Q Consensus 229 ~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (1096)
.+| +++++|++||.+|+++++.. ..+.+++++++.++++..+++++.+++++++++++..+ .....|...+
T Consensus 112 ~~g-~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 185 (230)
T PF00122_consen 112 VSG-WGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN-----DSGISFFKSF 185 (230)
T ss_dssp EEE-EEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG-----STTCHCCHHH
T ss_pred ccc-ccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec-----cccccccccc
Confidence 966 99999999999999998755 45567799999999999988888777777666554332 1123444444
Q ss_pred HhHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcccccccccccc
Q 001341 306 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISED 363 (1096)
Q Consensus 306 ~~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~ 363 (1096)
.. ++.++..++|++|++.++++....+..+.+ . ++.+|+++++|+
T Consensus 186 ~~---~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~------~----~i~v~~~~a~E~ 230 (230)
T PF00122_consen 186 LF---AISLLIVLIPCALPLALPLSLAIAARRLAK------N----GIIVKNLSALEA 230 (230)
T ss_dssp HH---HHHHHHHHS-TTHHHHHHHHHHHHHHHHHH------T----TEEESSTTHHHH
T ss_pred cc---ccceeeeecccceeehHHHHHHHHHHHHHH------C----CEEEeCcccccC
Confidence 43 345788899999999999998888774433 2 378999998884
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.9e-22 Score=210.59 Aligned_cols=97 Identities=31% Similarity=0.499 Sum_probs=91.3
Q ss_pred CcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHH
Q 001341 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVL 672 (1096)
Q Consensus 593 ~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (1096)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+++++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 78999999999999999999999999999999999999999999999999991
Q ss_pred HHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEee--ChhhH--HHHHHHHHhcCCeEEEEcCCccC
Q 001341 673 LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV--TPSQK--AQLVELLKSCDYRTLAIGDGGND 748 (1096)
Q Consensus 673 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~--tP~qK--~~iV~~lk~~~~~v~~iGDG~ND 748 (1096)
+..+++++ +|++| .++++.++..++.|+|+|||.||
T Consensus 168 ----------------------------------------~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD 207 (215)
T PF00702_consen 168 ----------------------------------------DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVND 207 (215)
T ss_dssp ----------------------------------------SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGH
T ss_pred ----------------------------------------cccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHH
Confidence 25688899 99999 99999999666799999999999
Q ss_pred hhhhhhcC
Q 001341 749 VRMIQKAD 756 (1096)
Q Consensus 749 ~~ml~~Ad 756 (1096)
++|+++||
T Consensus 208 ~~al~~Ag 215 (215)
T PF00702_consen 208 APALKAAG 215 (215)
T ss_dssp HHHHHHSS
T ss_pred HHHHHhCc
Confidence 99999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.5e-14 Score=130.64 Aligned_cols=89 Identities=31% Similarity=0.402 Sum_probs=71.7
Q ss_pred hhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeC
Q 001341 427 AVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC 506 (1096)
Q Consensus 427 ~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~ 506 (1096)
++||++....+++.......|+|+|.||++++.+.|.... ..+.+..|++++.+||+|+||||+|+++
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~----------~~~~~~~~~~~~~~pF~S~rK~msvv~~-- 68 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID----------IKEIRSKYKIVAEIPFDSERKRMSVVVR-- 68 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc----------HHHHHhhcceeEEEccCcccceeEEEEe--
Confidence 5899988765544333225899999999999999965332 1345678999999999999999999999
Q ss_pred CCCeEEEEecChhhhhhhhhc
Q 001341 507 HSGNISLLSKGADEAILPYAH 527 (1096)
Q Consensus 507 ~~~~~~l~~KGa~~~il~~~~ 527 (1096)
+++.+++|+|||||.|+++|+
T Consensus 69 ~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 69 NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred CCCEEEEEcCCChHHHHHhcC
Confidence 245688899999999999996
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.7e-13 Score=121.43 Aligned_cols=125 Identities=25% Similarity=0.396 Sum_probs=107.1
Q ss_pred cEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHH
Q 001341 594 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLL 673 (1096)
Q Consensus 594 l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (1096)
+.+.+.++---++-++|+++|+.|++. +++.+.|||..-+....|.-.|+-.
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~--------------------------- 70 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV--------------------------- 70 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce---------------------------
Confidence 567888888899999999999999999 9999999999999999999999721
Q ss_pred HccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhh
Q 001341 674 TMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ 753 (1096)
Q Consensus 674 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~ 753 (1096)
..+++...|+.|+++++.|++.++.|.|+|||+||.+||+
T Consensus 71 ----------------------------------------~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr 110 (152)
T COG4087 71 ----------------------------------------ERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALR 110 (152)
T ss_pred ----------------------------------------eeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhh
Confidence 3466778899999999999999999999999999999999
Q ss_pred hcCeeEEecCCchH--HHHhhccccccccchhhhH
Q 001341 754 KADIGVGISGREGL--QAARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 754 ~AdvGIam~g~~~~--~a~~~aD~vl~~f~~l~~l 786 (1096)
+||+||..-++++. .+..+||+++-+-+-+..+
T Consensus 111 ~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl 145 (152)
T COG4087 111 EADLGICTIQQEGVPERLLLTADVVLKEIAEILDL 145 (152)
T ss_pred hcccceEEeccCCcchHHHhhchhhhhhHHHHHHH
Confidence 99999966565543 3446899999876555444
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.5e-08 Score=115.22 Aligned_cols=254 Identities=16% Similarity=0.228 Sum_probs=157.7
Q ss_pred HHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCC--------
Q 001341 588 QRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK-------- 659 (1096)
Q Consensus 588 ~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~-------- 659 (1096)
++.-.+-+|.|++...-+.+.+....|+.|-++-|+.+..+-.+....+-.|.++||-..... .+.+..+
T Consensus 809 ~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNC--HISLa~~~d~Pg~e~ 886 (1354)
T KOG4383|consen 809 DQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNC--HISLAEEEDAPGREA 886 (1354)
T ss_pred HHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccce--eEEeccCCCCCcccC
Confidence 344467899999999999999999999999999999999999999999999999999655332 2222111
Q ss_pred --cHHHHHH---HHHHHHHHccccCCCCC----------cEEE------------EEcChhHHHHHHHHHHHHhhhhhcc
Q 001341 660 --TEDEVCR---SLERVLLTMRITTSEPK----------DVAF------------VVDGWALEIALKHYRKAFTELAILS 712 (1096)
Q Consensus 660 --~~~~~~~---~~~~~~~~~~~~~~~~~----------~~~l------------vi~g~~l~~~~~~~~~~f~~l~~~~ 712 (1096)
..+.... .+.+.++.+..++.+.. -..+ .-+-..|.....+.+.|..++..+.
T Consensus 887 ~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVP 966 (1354)
T KOG4383|consen 887 GPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVP 966 (1354)
T ss_pred CCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcc
Confidence 0011110 11122222211111000 0000 0000011111222334444443332
Q ss_pred c-eeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCcc--ChhhhhhcCeeEEecCCchH-------------HHHhhcc--
Q 001341 713 R-TAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGN--DVRMIQKADIGVGISGREGL-------------QAARAAD-- 774 (1096)
Q Consensus 713 ~-~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~N--D~~ml~~AdvGIam~g~~~~-------------~a~~~aD-- 774 (1096)
- ...|.+++|+.--+.++.+|+.|++|++.|...| ..-.+-+||++|++-.-+.. ..+++.|
T Consensus 967 LLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandgl 1046 (1354)
T KOG4383|consen 967 LLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGL 1046 (1354)
T ss_pred eeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCC
Confidence 2 4578999999999999999999999999999998 34456789999987322211 1122333
Q ss_pred --ccc--------cccch-----hhhH-HHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHH
Q 001341 775 --YSI--------GKFRF-----LKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMA 838 (1096)
Q Consensus 775 --~vl--------~~f~~-----l~~l-ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~ 838 (1096)
..+ .+|++ ++.. +++-.|....-+++.+.|.++..+++..++|+-.++.. .++|+..+++|
T Consensus 1047 splQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~L---P~i~s~sdii~ 1123 (1354)
T KOG4383|consen 1047 SPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFL---PIIFSHSDIIL 1123 (1354)
T ss_pred CceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc---cchhccchHHH
Confidence 111 13333 3333 35667777777888899999999888888877655432 45688888888
Q ss_pred HHhHhhhH
Q 001341 839 YNVFYTSI 846 (1096)
Q Consensus 839 ~n~~~~~l 846 (1096)
...+-..+
T Consensus 1124 lScfc~Pl 1131 (1354)
T KOG4383|consen 1124 LSCFCIPL 1131 (1354)
T ss_pred HHHHHHHH
Confidence 77655433
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.3e-10 Score=125.70 Aligned_cols=182 Identities=19% Similarity=0.269 Sum_probs=111.9
Q ss_pred CcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCC-----CCCeEEEE--cCC------
Q 001341 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-----PKGQLLSI--DGK------ 659 (1096)
Q Consensus 593 ~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~-----~~~~~~~~--~~~------ 659 (1096)
|.||+.- ..++.+.+.++|++++++|++++++|||....+..+.+++++..+. .+|..+.- ++.
T Consensus 11 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~ 87 (270)
T PRK10513 11 DGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTA 87 (270)
T ss_pred CCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecC
Confidence 4455532 2358899999999999999999999999999999999999974321 12222221 121
Q ss_pred -cHHHHHHHHHHHHHHccc------------cC-C-------------------------CCCcE--EEEEcC-hhHHHH
Q 001341 660 -TEDEVCRSLERVLLTMRI------------TT-S-------------------------EPKDV--AFVVDG-WALEIA 697 (1096)
Q Consensus 660 -~~~~~~~~~~~~~~~~~~------------~~-~-------------------------~~~~~--~lvi~g-~~l~~~ 697 (1096)
+.+.+...+ +..+.... .. . ..... .++.+. +.++..
T Consensus 88 l~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 166 (270)
T PRK10513 88 LSYDDYLYLE-KLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAA 166 (270)
T ss_pred CCHHHHHHHH-HHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHH
Confidence 222222211 11111000 00 0 00000 111221 122222
Q ss_pred HHHHHHHHh-hhhhccceeEEEeeChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHH
Q 001341 698 LKHYRKAFT-ELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 770 (1096)
Q Consensus 698 ~~~~~~~f~-~l~~~~~~~i~~r~tP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~ 770 (1096)
.+.+.+.+. .+....+...+.+++|. .|+..++.+.+. .+.|+++|||.||++||+.|++|||| +|+..+++
T Consensus 167 ~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~NA~~~vK 245 (270)
T PRK10513 167 IARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM-GNAIPSVK 245 (270)
T ss_pred HHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe-cCccHHHH
Confidence 223333221 12222223356788887 699999988752 36799999999999999999999999 89999999
Q ss_pred hhccccccc
Q 001341 771 RAADYSIGK 779 (1096)
Q Consensus 771 ~~aD~vl~~ 779 (1096)
+.||+|..+
T Consensus 246 ~~A~~vt~~ 254 (270)
T PRK10513 246 EVAQFVTKS 254 (270)
T ss_pred HhcCeeccC
Confidence 999998864
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.4e-10 Score=125.69 Aligned_cols=173 Identities=19% Similarity=0.159 Sum_probs=108.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCCeEEE--------EcCCcHHHHHHHHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS--------IDGKTEDEVCRSLERVLLT 674 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 674 (1096)
.+.+.+.++|++|+++|+++.++|||....+..+..++++..+ ..+|..+. -...+.+.+.+.++.....
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 5889999999999999999999999999999999999997432 11222222 1111223332222111000
Q ss_pred -c--c--------------------------cc--------CCCCCcEEEEEcChhHHHHHHHHHHHHhh-hhhccceeE
Q 001341 675 -M--R--------------------------IT--------TSEPKDVAFVVDGWALEIALKHYRKAFTE-LAILSRTAI 716 (1096)
Q Consensus 675 -~--~--------------------------~~--------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~-l~~~~~~~i 716 (1096)
. . .. .....+..+..+.+.++.+.+.+.+.|.. +.......-
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 0 0 00 00001111111222333333334343321 222222234
Q ss_pred EEeeChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccc--ccc
Q 001341 717 CCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY--SIG 778 (1096)
Q Consensus 717 ~~r~tP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~--vl~ 778 (1096)
+.+++|. .|+..++.+.+. .+.|+++|||.||++||+.|+.|||| ||+..+++++||+ +..
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~Na~~~vK~~A~~~~v~~ 247 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM-GNAMPQLRAELPHLPVIG 247 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec-cCChHHHHHhCCCCeecC
Confidence 7789998 599999988762 36799999999999999999999999 8999999999987 554
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.3e-10 Score=118.87 Aligned_cols=166 Identities=13% Similarity=0.162 Sum_probs=113.8
Q ss_pred hhhhhHHHHHHHhHhhhHhHhhhhccCCCChhhhhcCCccccccccCCccCchhHHHHHHHHHHHHHHHHHHhhhhcc-c
Q 001341 829 SLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYA-Y 907 (1096)
Q Consensus 829 ~~~~~~~ll~~n~~~~~lp~~~~~~~~d~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 907 (1096)
.++++.|++|.|+++|.+|++++++| ++++++|++||+ .+++.+++.+.+......|++++++.++..+.... +
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e--~~~~~im~r~Pr---~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~ 76 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFE--PPDPDIMKRPPR---DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIF 76 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGS--S-STTGGGS------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHST
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcC--cchhhhhhcccc---ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 46899999999999999999998988 489999999994 78889999999888888899988877766544332 2
Q ss_pred cccc---------ceehhhhhhHHHHHHHHhhhheeec-chh---HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHH
Q 001341 908 EKSE---------MEEVSMVALSGCIWLQAFVVALETN-SFT---VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFR 974 (1096)
Q Consensus 908 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 974 (1096)
+... .+++.+.+++.+.+++.+.++...+ .|. .+.+..+++++++.++++.+..++|..+. .++
T Consensus 77 ~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~---~f~ 153 (182)
T PF00689_consen 77 GWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNR---IFG 153 (182)
T ss_dssp CSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHH---HST
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHh---hhc
Confidence 2211 2333444444455555556665332 232 34677788888888888888888886553 344
Q ss_pred hhc-CHhHHHHHHHHHHHHHHHHHHHHHH
Q 001341 975 LCS-QPSYWITMFLIVAAGMGPIVALKYF 1002 (1096)
Q Consensus 975 ~~~-~~~~w~~~~l~~~~~l~~~~~~k~~ 1002 (1096)
+.+ ++..|+.+++..++.++..++.|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 433 7899988888888888888888864
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.8e-10 Score=121.67 Aligned_cols=173 Identities=22% Similarity=0.229 Sum_probs=106.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCCeEEE-EcCC-------cHHHHHHHHHHHHH-
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-IDGK-------TEDEVCRSLERVLL- 673 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~~~~~-~~~~-------~~~~~~~~~~~~~~- 673 (1096)
.+.+.+.++|++++++|+++.++|||....+..+..++++..+ ..+|.++. .++. +.+.+.+.++...+
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~~ 98 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHDN 98 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhccc
Confidence 4888999999999999999999999999999999999987432 11222222 1221 11222221111100
Q ss_pred -Hcc--cc--------CC-----------------------CCCc-EE-EEEc--ChhHHHHHHHHHHHHhh-hhhccce
Q 001341 674 -TMR--IT--------TS-----------------------EPKD-VA-FVVD--GWALEIALKHYRKAFTE-LAILSRT 714 (1096)
Q Consensus 674 -~~~--~~--------~~-----------------------~~~~-~~-lvi~--g~~l~~~~~~~~~~f~~-l~~~~~~ 714 (1096)
... .. .. .... .. ++.. .+.++.+.+.+.+.|.. +......
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~ 178 (266)
T PRK10976 99 PDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFST 178 (266)
T ss_pred CCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEeC
Confidence 000 00 00 0000 01 1111 22333333333333321 2222223
Q ss_pred eEEEeeChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcc--cccc
Q 001341 715 AICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAAD--YSIG 778 (1096)
Q Consensus 715 ~i~~r~tP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD--~vl~ 778 (1096)
..+.+++|. .|+..++.+.+ . .+.|+++|||.||++||+.|+.|||| ||+..++++.|| ++..
T Consensus 179 ~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm-~NA~~~vK~~A~~~~v~~ 249 (266)
T PRK10976 179 LTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM-GNAHQRLKDLLPELEVIG 249 (266)
T ss_pred CceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee-cCCcHHHHHhCCCCeecc
Confidence 357789997 59999998875 2 36799999999999999999999999 999999999887 5654
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.6e-10 Score=121.56 Aligned_cols=172 Identities=26% Similarity=0.348 Sum_probs=112.0
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCC-------eEEEEcCCcHHHHHHHHHHHHHHc-
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKG-------QLLSIDGKTEDEVCRSLERVLLTM- 675 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~- 675 (1096)
+.+.++++|+++++.|+++.++||++...+..+.+++++..+ ..+| +.+.....+.+.+...++.. ...
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~-~~~~ 99 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELL-EDFQ 99 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHH-Hhcc
Confidence 889999999999999999999999999999999999999653 1111 11111112222222222211 111
Q ss_pred ----cccC---------C---------------------CC---CcEEEEEcChhHHHHHHHHHHHHhhhh--hccceeE
Q 001341 676 ----RITT---------S---------------------EP---KDVAFVVDGWALEIALKHYRKAFTELA--ILSRTAI 716 (1096)
Q Consensus 676 ----~~~~---------~---------------------~~---~~~~lvi~g~~l~~~~~~~~~~f~~l~--~~~~~~i 716 (1096)
.... . .. ....+..+.+.+..+.+.+.+.+.... .......
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~ 179 (264)
T COG0561 100 GIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPI 179 (264)
T ss_pred CceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCc
Confidence 0000 0 00 011223334455555555566555322 2222334
Q ss_pred EEeeChh--hHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 717 CCRVTPS--QKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 717 ~~r~tP~--qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
+.+++|. +|+..++.+.+ .| +.|+++||+.||++||+.|+.|||| ||+...+++.||++...
T Consensus 180 ~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam-~Na~~~~k~~A~~vt~~ 247 (264)
T COG0561 180 SLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM-GNADEELKELADYVTTS 247 (264)
T ss_pred eEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec-cCCCHHHHhhCCcccCC
Confidence 4888887 69999998876 33 4699999999999999999999999 88888888999966543
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.4e-09 Score=117.16 Aligned_cols=175 Identities=22% Similarity=0.333 Sum_probs=119.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC----------CCCCeEEEEcCCcHHHHHHHHHHHHH
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----------EPKGQLLSIDGKTEDEVCRSLERVLL 673 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (1096)
..+.+++.++|+.|+++|+++.++|||.+..+..+..++++..+ ...++.+....-+.+.+...++....
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 45778999999999999999999999999999999999997522 01111222222233333333222221
Q ss_pred H-ccc--------------------------------------cCCCCCcEEEEEcChhHHHHHHHHHHHHhhh-hhccc
Q 001341 674 T-MRI--------------------------------------TTSEPKDVAFVVDGWALEIALKHYRKAFTEL-AILSR 713 (1096)
Q Consensus 674 ~-~~~--------------------------------------~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l-~~~~~ 713 (1096)
. ... ......+..+..+...++.+.+.+.+.+... .....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 1 000 0011233444445566677777777777654 33334
Q ss_pred eeEEEeeChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 714 TAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 714 ~~i~~r~tP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
...+.+++|. .|+..++.+.+ ..+.++++||+.||.+|++.|+.||+| +++...+++.||++...
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am-~na~~~~k~~a~~i~~~ 244 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM-GNATPELKKAADYITPS 244 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE-TTS-HHHHHHSSEEESS
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE-cCCCHHHHHhCCEEecC
Confidence 5667788886 69999998875 246899999999999999999999999 88888899999998875
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=5.3e-09 Score=113.12 Aligned_cols=172 Identities=20% Similarity=0.221 Sum_probs=104.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCCeEEEEc--CC-----cHHHHHHHHHHHHHHcc
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSID--GK-----TEDEVCRSLERVLLTMR 676 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~ 676 (1096)
+.+.+.++|++++++|++++++|||....+..+++.+|+..+ ..+|..+... +. ..+.....++.......
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 788999999999999999999999999999999999987432 1122222211 11 11222222222111110
Q ss_pred c-----cC--CCCCcEEE-EEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhh--HHHHHHHHHhc----CCeEEEE
Q 001341 677 I-----TT--SEPKDVAF-VVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--KAQLVELLKSC----DYRTLAI 742 (1096)
Q Consensus 677 ~-----~~--~~~~~~~l-vi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~q--K~~iV~~lk~~----~~~v~~i 742 (1096)
. .. .......+ +......+...+.+. .+..-........+.++.|.. |+..++.+.+. ...++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLE-ELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHH-HcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 0 00 00001111 122222222222221 221101111222456888875 99988888652 3579999
Q ss_pred cCCccChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 743 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 743 GDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
|||.||.+|++.|++||+| +|+..++++.||++..+
T Consensus 180 GD~~NDi~m~~~ag~~vam-~Na~~~vk~~a~~v~~~ 215 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAV-ANADEELKEAADYVTEK 215 (230)
T ss_pred CCchhhHHHHHhcCceEEe-cCccHHHHHhcceEecC
Confidence 9999999999999999999 88888899999998764
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.93 E-value=9.6e-09 Score=109.83 Aligned_cols=171 Identities=18% Similarity=0.230 Sum_probs=105.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCCeEEEEcCCc-------HHHHHHHHHHHHHHc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGKT-------EDEVCRSLERVLLTM 675 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 675 (1096)
++.+++.++|++|+++|+++.++||+....+..+++.+++..+ ..+|.++...+.. ...............
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999987533 1112222221111 000000000000000
Q ss_pred ccc-CCC-CCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChh--hHHHHHHHHHh-c---CCeEEEEcCCcc
Q 001341 676 RIT-TSE-PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGN 747 (1096)
Q Consensus 676 ~~~-~~~-~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~--qK~~iV~~lk~-~---~~~v~~iGDG~N 747 (1096)
... ... .....+..++...+...+.+++ ..+.... ...+.+++|. .|+..++.+.+ . ...++++||+.|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~-~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~N 174 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKE--RGLNLVD-SGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSEN 174 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHh--CCeEEEe-cCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence 000 000 1122223344444443333322 1111111 1235677775 79999988865 2 346999999999
Q ss_pred ChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 748 DVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 748 D~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
|.+|++.|++|++| +|+..++++.||++..+
T Consensus 175 D~~ml~~ag~~vam-~na~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 175 DIDLFRVVGFKVAV-ANADDQLKEIADYVTSN 205 (215)
T ss_pred HHHHHHhCCCeEEc-CCccHHHHHhCCEEcCC
Confidence 99999999999999 88888899999998863
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.7e-08 Score=108.71 Aligned_cols=173 Identities=17% Similarity=0.213 Sum_probs=102.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCC--CCCeEEEEcCC---------cHHHHHHHHHHHH-
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE--PKGQLLSIDGK---------TEDEVCRSLERVL- 672 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~--~~~~~~~~~~~---------~~~~~~~~~~~~~- 672 (1096)
.+.+.+.++|++++++||+++++||+....+..+++.+|+..+- .++..+...+. .............
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 47788999999999999999999999999999999999853220 11111211110 0000111111100
Q ss_pred --HHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChh--hHHHHHHHHHh-c---CCeEEEEcC
Q 001341 673 --LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGD 744 (1096)
Q Consensus 673 --~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~--qK~~iV~~lk~-~---~~~v~~iGD 744 (1096)
...............+......+.. ....+.+..-........+.++.|. .|+..++.+.+ . .+.++++||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD 173 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTV-REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD 173 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHH-HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC
Confidence 0000000011111122222222221 1222222110111122346778875 69988888765 2 367999999
Q ss_pred CccChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 745 GGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 745 G~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
+.||++|++.|++|++| +|+...++..||+|..+
T Consensus 174 ~~NDi~m~~~ag~~vam-~Na~~~~k~~A~~vt~~ 207 (225)
T TIGR01482 174 SENDIDLFEVPGFGVAV-ANAQPELKEWADYVTES 207 (225)
T ss_pred CHhhHHHHHhcCceEEc-CChhHHHHHhcCeecCC
Confidence 99999999999999999 88888899999998753
|
catalyze the same reaction as SPP. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.6e-08 Score=121.08 Aligned_cols=184 Identities=17% Similarity=0.218 Sum_probs=109.7
Q ss_pred cCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCC-----------CCCeEEE-----
Q 001341 592 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-----------PKGQLLS----- 655 (1096)
Q Consensus 592 ~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~-----------~~~~~~~----- 655 (1096)
-|.||+.- .-.+.+.+.++|++++++|++++++|||....+..+.+++++...+ .+|.++.
T Consensus 315 LDGTLLn~---d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NGA~I~d~~g~ 391 (580)
T PLN02887 315 MDGTLLNS---KSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQGLLVYGRQGR 391 (580)
T ss_pred CCCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecCeEEEECCCc
Confidence 35556531 2258899999999999999999999999999999999988864211 0121221
Q ss_pred ---EcCCcHHHHHHHHHHHHHH-c--ccc-C----------------------C-----------CCCc-EE-EEEcCh-
Q 001341 656 ---IDGKTEDEVCRSLERVLLT-M--RIT-T----------------------S-----------EPKD-VA-FVVDGW- 692 (1096)
Q Consensus 656 ---~~~~~~~~~~~~~~~~~~~-~--~~~-~----------------------~-----------~~~~-~~-lvi~g~- 692 (1096)
-...+.+.+.+.++...+. + ... . . ...+ .. ++++..
T Consensus 392 ~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e 471 (580)
T PLN02887 392 EIYRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAE 471 (580)
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCeeEEEEEcChH
Confidence 1111222222222211100 0 000 0 0 0000 01 111111
Q ss_pred h-HHHHHHHHHHHHh-hhhhccceeEEEeeChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCeeEEecCC
Q 001341 693 A-LEIALKHYRKAFT-ELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGR 764 (1096)
Q Consensus 693 ~-l~~~~~~~~~~f~-~l~~~~~~~i~~r~tP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 764 (1096)
. .+...+.+.+.+. .+........+.+++|. .|+..++.+.+. .+.|++||||.||++||+.|++|||| ||
T Consensus 472 ~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM-gN 550 (580)
T PLN02887 472 GVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL-SN 550 (580)
T ss_pred HHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe-CC
Confidence 1 1111122222221 11112223346788887 699999988763 35799999999999999999999999 99
Q ss_pred chHHHHhhccccccc
Q 001341 765 EGLQAARAADYSIGK 779 (1096)
Q Consensus 765 ~~~~a~~~aD~vl~~ 779 (1096)
+..++++.||+|..+
T Consensus 551 A~eeVK~~Ad~VT~s 565 (580)
T PLN02887 551 GAEKTKAVADVIGVS 565 (580)
T ss_pred CCHHHHHhCCEEeCC
Confidence 999999999998754
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.8e-08 Score=110.47 Aligned_cols=173 Identities=18% Similarity=0.170 Sum_probs=102.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCCeEEE---------EcCCcHHHHHHHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS---------IDGKTEDEVCRSLERVLL 673 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 673 (1096)
.+.+.+.++|++++++|+++.++|||....+..+.+++++..+ ..+|.++. -..-+.+.+.+.++...+
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l~~~~~~~i~~~~~~ 99 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPLPVQQALQVIEMLDE 99 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCCCHHHHHHHHHHHHh
Confidence 4788999999999999999999999999999999999987432 01111221 111222222222221111
Q ss_pred H-ccc----------cC----------------------------------CCCCcEEEEEcCh---hHHHHHHHHHHHH
Q 001341 674 T-MRI----------TT----------------------------------SEPKDVAFVVDGW---ALEIALKHYRKAF 705 (1096)
Q Consensus 674 ~-~~~----------~~----------------------------------~~~~~~~lvi~g~---~l~~~~~~~~~~f 705 (1096)
. +.. .. .......+..... .++...+.+.+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T PRK10530 100 HQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHEL 179 (272)
T ss_pred CCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhc
Confidence 0 000 00 0000111122211 1122222222222
Q ss_pred hhhhhccceeEEEeeChh--hHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 706 TELAILSRTAICCRVTPS--QKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 706 ~~l~~~~~~~i~~r~tP~--qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
. +.......-+.+++|. .|+..++.+.+ .| +.++++||+.||++|++.|++||+| |++..+++..||++..+
T Consensus 180 ~-~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam-gna~~~lk~~Ad~v~~~ 257 (272)
T PRK10530 180 G-LECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM-GNADDAVKARADLVIGD 257 (272)
T ss_pred C-ceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe-cCchHHHHHhCCEEEec
Confidence 1 1111111124567775 59988887654 33 5799999999999999999999999 78878888899998864
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.83 E-value=5e-08 Score=107.33 Aligned_cols=174 Identities=20% Similarity=0.293 Sum_probs=106.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCCeEEE--------EcCCcHHHHHHHHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS--------IDGKTEDEVCRSLERVLLT 674 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 674 (1096)
++.+++.++|++|+++|+++.++|||....+..+..++++..+ ..+|..+. ....+.+.+.+.++...+.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 5788999999999999999999999999999999999887432 11111222 1222223333222211110
Q ss_pred -cc----------ccCC---------------------------CCCcEEEEE-cChhHHHHHHHHHH-HHh-hhhhccc
Q 001341 675 -MR----------ITTS---------------------------EPKDVAFVV-DGWALEIALKHYRK-AFT-ELAILSR 713 (1096)
Q Consensus 675 -~~----------~~~~---------------------------~~~~~~lvi-~g~~l~~~~~~~~~-~f~-~l~~~~~ 713 (1096)
.. .... ......++. +...++.+.+.+.+ .+. .+.....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 175 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSS 175 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEe
Confidence 00 0000 000001111 11122222222221 121 1211222
Q ss_pred eeEEEeeChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 714 TAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 714 ~~i~~r~tP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
..-+.+++|. .|+..++.+.+. .+.++++||+.||++|++.|++|++| +++...++..||++..+
T Consensus 176 ~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~-~na~~~~k~~a~~~~~~ 246 (256)
T TIGR00099 176 GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM-GNADEELKALADYVTDS 246 (256)
T ss_pred cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe-cCchHHHHHhCCEEecC
Confidence 3346788887 599999988763 35799999999999999999999999 78778888899998864
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.3e-08 Score=108.67 Aligned_cols=170 Identities=16% Similarity=0.194 Sum_probs=97.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCC-C--CCCCeEEEEc--------------CCcHHHHHHHH
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EPKGQLLSID--------------GKTEDEVCRSL 668 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~-~--~~~~~~~~~~--------------~~~~~~~~~~~ 668 (1096)
+.+.+.++|++|+++||+++++|||....+..+++++|+.. + ..+|..+... ..+.+.+...+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45778999999999999999999999999999999999732 1 1122223221 11222222222
Q ss_pred HHHHHHccc--------------------------cCCCCCcEEEEEcC--hhHHHHHHHHHHHHhhhhhccceeEEEee
Q 001341 669 ERVLLTMRI--------------------------TTSEPKDVAFVVDG--WALEIALKHYRKAFTELAILSRTAICCRV 720 (1096)
Q Consensus 669 ~~~~~~~~~--------------------------~~~~~~~~~lvi~g--~~l~~~~~~~~~~f~~l~~~~~~~i~~r~ 720 (1096)
+...+.... .........+.+.. ..+..+.+.+.+. .+.... ...+.++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~-~~~~iEi 181 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAEL--GLQFVQ-GARFWHV 181 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHC--CCEEEe-cCeeEEE
Confidence 211111000 00000011122222 1222222222221 121111 2236788
Q ss_pred Chh--hHHHHHHHHHh-------cCCeEEEEcCCccChhhhhhcCeeEEecCCch-H--HH---Hhhccccccc
Q 001341 721 TPS--QKAQLVELLKS-------CDYRTLAIGDGGNDVRMIQKADIGVGISGREG-L--QA---ARAADYSIGK 779 (1096)
Q Consensus 721 tP~--qK~~iV~~lk~-------~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~-~--~a---~~~aD~vl~~ 779 (1096)
+|. .|+..++.+.+ ....|+++|||.||++||+.|++|||| |+.. . ++ +..||++...
T Consensus 182 ~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM-~~~~~~~~~l~~~~~~~~~~~~~ 254 (271)
T PRK03669 182 LDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV-KGLNREGVHLQDDDPARVYRTQR 254 (271)
T ss_pred ecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe-cCCCCCCcccccccCCceEeccC
Confidence 886 69988887764 346799999999999999999999999 5332 1 12 2267776653
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.8e-07 Score=102.86 Aligned_cols=169 Identities=13% Similarity=0.107 Sum_probs=98.2
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCCeEEEEcC--------------CcHHHHHHHHH
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDG--------------KTEDEVCRSLE 669 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~~~~~~~~--------------~~~~~~~~~~~ 669 (1096)
..+.+.++|++|+++|+++.++||+....+..+.+++|+..+ ..+|..+...+ .+.+.+.+.++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 445689999999999999999999999999999999997432 11222222211 12222322222
Q ss_pred HHHHHc--cc------------------------cCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChh
Q 001341 670 RVLLTM--RI------------------------TTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS 723 (1096)
Q Consensus 670 ~~~~~~--~~------------------------~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~ 723 (1096)
...... .. .........++.+.+.++.+.+.+.+. .+.... ...+.++.|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-s~~~~ei~~~ 173 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVEL--GLEVTH-GNRFYHVLGA 173 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHc--CCEEEe-CCceEEEecC
Confidence 111100 00 000011111122222333322222211 111111 2236677776
Q ss_pred --hHHHHHHHHHh----c--CCeEEEEcCCccChhhhhhcCeeEEecCCch---HHHHhh--c-ccccc
Q 001341 724 --QKAQLVELLKS----C--DYRTLAIGDGGNDVRMIQKADIGVGISGREG---LQAARA--A-DYSIG 778 (1096)
Q Consensus 724 --qK~~iV~~lk~----~--~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~---~~a~~~--a-D~vl~ 778 (1096)
.|+..++.+.+ . .+.++++||+.||.+|++.|++||+| +|+. .+++.. | +++-.
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam-~Na~~~~~~lk~~~~a~~~vt~ 241 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV-PGPNGPNVSLKPGDPGSFLLTP 241 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe-CCCCCCccccCccCCCcEEEcC
Confidence 58888877764 2 56799999999999999999999999 7765 356665 4 47553
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.1e-07 Score=99.80 Aligned_cols=116 Identities=24% Similarity=0.249 Sum_probs=84.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.+.|+.+++.| ++.++||-....+..+++.+|+..--.+ -+.+++..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an--~l~~~~~g------------------------ 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDDSD------------------------ 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhce--eeEEecCC------------------------
Confidence 58999999999999975 9999999999999999999998421110 00000000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 764 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 764 (1096)
.++| .. ...+..|..+++.+++.+..++++|||.||++|++.||+||++.++
T Consensus 121 ---~~tG----------------------~~---~~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak 172 (203)
T TIGR02137 121 ---RVVG----------------------YQ---LRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAP 172 (203)
T ss_pred ---eeEC----------------------ee---ecCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence 0001 00 1346789999999988887899999999999999999999999555
Q ss_pred chHHHHhhc-cccc
Q 001341 765 EGLQAARAA-DYSI 777 (1096)
Q Consensus 765 ~~~~a~~~a-D~vl 777 (1096)
+. +.++| |+-.
T Consensus 173 ~~--~~~~~~~~~~ 184 (203)
T TIGR02137 173 EN--VIREFPQFPA 184 (203)
T ss_pred HH--HHHhCCCCCc
Confidence 43 55555 4433
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.6e-07 Score=105.42 Aligned_cols=127 Identities=23% Similarity=0.256 Sum_probs=90.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.+.|+.|+++|+++.++||.....+..+..++|+..--.+ .+.
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an--~le----------------------------- 229 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVAN--ELE----------------------------- 229 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEe--EEE-----------------------------
Confidence 5899999999999999999999999998888888888888321100 000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEE-eeChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCeeE
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC-RVTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGV 759 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~-r~tP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGI 759 (1096)
+.+|.. ...+.. -+..+.|.+.++.+.+ . .+.|+++|||.||.+|++.|++||
T Consensus 230 ---i~dg~l-------------------tg~v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgi 287 (322)
T PRK11133 230 ---IMDGKL-------------------TGNVLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGI 287 (322)
T ss_pred ---EECCEE-------------------EeEecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeE
Confidence 001100 000010 1233678888887764 3 367999999999999999999999
Q ss_pred EecCCchHHHHhhccccccccchhhhHH
Q 001341 760 GISGREGLQAARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 760 am~g~~~~~a~~~aD~vl~~f~~l~~ll 787 (1096)
++ ++...+++.||+++. +..|..++
T Consensus 288 A~--nAkp~Vk~~Ad~~i~-~~~l~~~l 312 (322)
T PRK11133 288 AY--HAKPKVNEQAQVTIR-HADLMGVL 312 (322)
T ss_pred Ee--CCCHHHHhhCCEEec-CcCHHHHH
Confidence 99 566678889999996 45555544
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.7e-07 Score=101.39 Aligned_cols=170 Identities=19% Similarity=0.204 Sum_probs=99.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCCeEEEEc----------------------CC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSID----------------------GK 659 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~~~~~~~----------------------~~ 659 (1096)
+.+.+++.++|++|+++|++++++||+....+..+.+++|+..+ ..+|.++... ..
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGP 99 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCC
Confidence 35667899999999999999999999999999999999998543 1112222211 11
Q ss_pred cHHHHHHHHHHHHHHcc----c----------------------cCCCCCcEEEE-E-cChhHHHHHHHHHHHHhhhhhc
Q 001341 660 TEDEVCRSLERVLLTMR----I----------------------TTSEPKDVAFV-V-DGWALEIALKHYRKAFTELAIL 711 (1096)
Q Consensus 660 ~~~~~~~~~~~~~~~~~----~----------------------~~~~~~~~~lv-i-~g~~l~~~~~~~~~~f~~l~~~ 711 (1096)
+.+.+.+.++....... . .........++ . +.+..+.+.+.+.. + .+...
T Consensus 100 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~ 177 (273)
T PRK00192 100 PYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKR-L-GLKVT 177 (273)
T ss_pred CHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHH-c-CCEEE
Confidence 12222222211111000 0 00000011112 1 22333333222221 1 11111
Q ss_pred cceeEEEeeChh-hHHHHHHHHHh----cC-CeEEEEcCCccChhhhhhcCeeEEecCCchHHHH----hhc-cccc
Q 001341 712 SRTAICCRVTPS-QKAQLVELLKS----CD-YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA----RAA-DYSI 777 (1096)
Q Consensus 712 ~~~~i~~r~tP~-qK~~iV~~lk~----~~-~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~----~~a-D~vl 777 (1096)
....+.++.|. .|+..++.+.+ .. +.|+++||+.||++|++.|++|++| +|+..+++ .+| +.+.
T Consensus 178 -~~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam-~NA~~~~k~~~~~~a~~~v~ 252 (273)
T PRK00192 178 -RGGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVV-PGPDGPNPPLLPGIADGEFI 252 (273)
T ss_pred -ECCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEe-CCCCCCCcccCccccCCceE
Confidence 12235566666 78888877764 35 8899999999999999999999999 88877777 455 5555
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=8.9e-07 Score=93.51 Aligned_cols=120 Identities=23% Similarity=0.243 Sum_probs=86.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
.++.|++.+.++.++++|.+|+++||-...-+..+|+.+|+...-.+ .+..++.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an--~l~~~dG------------------------ 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVAN--ELEIDDG------------------------ 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheee--EEEEeCC------------------------
Confidence 78999999999999999999999999999999999999999543221 1111000
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEE-eeChhhHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCee
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICC-RVTPSQKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIG 758 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~-r~tP~qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~AdvG 758 (1096)
..+ ..+.. .+..+.|...++.+.+ .| +.+.++|||.||.|||+.|+.+
T Consensus 130 ----~lt-----------------------G~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ 182 (212)
T COG0560 130 ----KLT-----------------------GRVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLP 182 (212)
T ss_pred ----EEe-----------------------ceeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCC
Confidence 001 12222 3344679888866654 34 4699999999999999999999
Q ss_pred EEecCCchHHHHhhcccccc
Q 001341 759 VGISGREGLQAARAADYSIG 778 (1096)
Q Consensus 759 Iam~g~~~~~a~~~aD~vl~ 778 (1096)
|++... ....+.|+..+.
T Consensus 183 ia~n~~--~~l~~~a~~~~~ 200 (212)
T COG0560 183 IAVNPK--PKLRALADVRIW 200 (212)
T ss_pred eEeCcC--HHHHHHHHHhcC
Confidence 999333 224455554443
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.3e-06 Score=95.71 Aligned_cols=169 Identities=17% Similarity=0.212 Sum_probs=103.9
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCC----CCCeEEEEcCCc-HHHH-H---------HH
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE----PKGQLLSIDGKT-EDEV-C---------RS 667 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~----~~~~~~~~~~~~-~~~~-~---------~~ 667 (1096)
..+..|.+.++++++++.|+.++++||+....+..+.++.++..++ .+|..+...+.. .+.. . ..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3456788999999999999999999999999999999999986553 122233333311 1111 0 00
Q ss_pred HHHHHHHcc---cc---CCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhcc----ceeEEEeeChh--hHHHHHHHHHhc
Q 001341 668 LERVLLTMR---IT---TSEPKDVAFVVDGWALEIALKHYRKAFTELAILS----RTAICCRVTPS--QKAQLVELLKSC 735 (1096)
Q Consensus 668 ~~~~~~~~~---~~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~----~~~i~~r~tP~--qK~~iV~~lk~~ 735 (1096)
+......+. .. .....+..+..+.+......+.+.+.+....... ...-+.++.|. .|+..++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 111111111 00 1122334444444443333444444443221111 12234577775 699999988752
Q ss_pred ----CCeEEEEcCCccChhhhhh-cCeeEEecCCchHHHHhh
Q 001341 736 ----DYRTLAIGDGGNDVRMIQK-ADIGVGISGREGLQAARA 772 (1096)
Q Consensus 736 ----~~~v~~iGDG~ND~~ml~~-AdvGIam~g~~~~~a~~~ 772 (1096)
...|+++||+.||++|++. ++.||+| +|+..+++..
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~-~na~~~~k~~ 219 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIV-SNAQEELLQW 219 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEE-CCCHHHHHHH
Confidence 4679999999999999998 7799999 8877777754
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.46 E-value=9.6e-07 Score=95.84 Aligned_cols=158 Identities=19% Similarity=0.262 Sum_probs=93.5
Q ss_pred HHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcH--------HH-HHH---------HHHHHHH
Q 001341 612 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE--------DE-VCR---------SLERVLL 673 (1096)
Q Consensus 612 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~--------~~-~~~---------~~~~~~~ 673 (1096)
++++ ++++|+++.++||+....+..+...+++..++. ++..+|... +. ... .+.....
T Consensus 22 ~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~---~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (236)
T TIGR02471 22 ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDV---LIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALA 97 (236)
T ss_pred HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCE---EEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHh
Confidence 5666 699999999999999999999999998853321 222222211 11 000 1122222
Q ss_pred Hcc---ccCCC---CCcEEEEEcCh---hHHHHHHHHHHHHhhhhhccceeEEEeeChh--hHHHHHHHHHh-cC---Ce
Q 001341 674 TMR---ITTSE---PKDVAFVVDGW---ALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS-CD---YR 738 (1096)
Q Consensus 674 ~~~---~~~~~---~~~~~lvi~g~---~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~--qK~~iV~~lk~-~~---~~ 738 (1096)
... ..... ..+..+..+.+ .++.+.+.+.+............-+.++.|. .|+..++.+.+ .| ..
T Consensus 98 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~ 177 (236)
T TIGR02471 98 DIPGLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQ 177 (236)
T ss_pred cCCCcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHH
Confidence 111 11111 22344444443 2222222222211111011111123467776 79999998875 33 46
Q ss_pred EEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcc
Q 001341 739 TLAIGDGGNDVRMIQKADIGVGISGREGLQAARAAD 774 (1096)
Q Consensus 739 v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD 774 (1096)
++++||+.||.+|++.|++||+| +++..++++.||
T Consensus 178 ~i~~GD~~nD~~ml~~~~~~iav-~na~~~~k~~a~ 212 (236)
T TIGR02471 178 ILVAGDSGNDEEMLRGLTLGVVV-GNHDPELEGLRH 212 (236)
T ss_pred EEEEcCCccHHHHHcCCCcEEEE-cCCcHHHHHhhc
Confidence 99999999999999999999999 888888999998
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.42 E-value=2e-06 Score=100.23 Aligned_cols=163 Identities=18% Similarity=0.210 Sum_probs=102.9
Q ss_pred hHHHH-HHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCC----CCeEEEEcCCc-HHH-HHHHH---------HHHHH
Q 001341 610 VPETI-ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP----KGQLLSIDGKT-EDE-VCRSL---------ERVLL 673 (1096)
Q Consensus 610 v~~~I-~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~----~~~~~~~~~~~-~~~-~~~~~---------~~~~~ 673 (1096)
..+++ +++++.|+.++++||+.+..+..+.++.++..++. +|..+...+.- .+. ....+ .+...
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 44455 88899999999999999999999999999887742 22222222111 111 11111 11111
Q ss_pred Hcc-c--c---CCCCCcEEEEEcChhHHHHHHHHHHHHhhh----hhccceeEEEeeChh--hHHHHHHHHHhc----C-
Q 001341 674 TMR-I--T---TSEPKDVAFVVDGWALEIALKHYRKAFTEL----AILSRTAICCRVTPS--QKAQLVELLKSC----D- 736 (1096)
Q Consensus 674 ~~~-~--~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l----~~~~~~~i~~r~tP~--qK~~iV~~lk~~----~- 736 (1096)
.+. . . .....+..+..+......+.+.+.+.|... ....+...+.++.|. .|+..++.|.+. |
T Consensus 113 ~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi 192 (413)
T PLN02382 113 KFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGK 192 (413)
T ss_pred cCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCC
Confidence 111 0 0 112234455555545555555555555321 111233357788987 599999988653 2
Q ss_pred --CeEEEEcCCccChhhhhhcC-eeEEecCCchHHHHhhc
Q 001341 737 --YRTLAIGDGGNDVRMIQKAD-IGVGISGREGLQAARAA 773 (1096)
Q Consensus 737 --~~v~~iGDG~ND~~ml~~Ad-vGIam~g~~~~~a~~~a 773 (1096)
..|+++||+.||++||+.|+ .||+| ||+..++++.+
T Consensus 193 ~~~~~iafGDs~NDleMl~~ag~~gvam-~NA~~elk~~a 231 (413)
T PLN02382 193 APVNTLVCGDSGNDAELFSVPDVYGVMV-SNAQEELLQWY 231 (413)
T ss_pred ChhcEEEEeCCHHHHHHHhcCCCCEEEE-cCCcHHHHHHH
Confidence 57999999999999999999 69999 88888888754
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.40 E-value=8.1e-07 Score=90.04 Aligned_cols=99 Identities=20% Similarity=0.265 Sum_probs=75.1
Q ss_pred HHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Q 001341 612 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 691 (1096)
Q Consensus 612 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 691 (1096)
..|+.|+++|+++.++|+.....+......+|+..- . ++.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------f--~~~-------------------------------- 80 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------H--EGI-------------------------------- 80 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------E--ecC--------------------------------
Confidence 489999999999999999999999999999998311 0 000
Q ss_pred hhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHh
Q 001341 692 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR 771 (1096)
Q Consensus 692 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~ 771 (1096)
.-.|+--..+++.++-..+.+++|||+.||++|++.|+++++| +++..+++.
T Consensus 81 ---------------------------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am-~nA~~~lk~ 132 (169)
T TIGR02726 81 ---------------------------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAV-GDAVADVKE 132 (169)
T ss_pred ---------------------------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEEC-cCchHHHHH
Confidence 0012222223333332346799999999999999999999999 788888889
Q ss_pred hcccccc
Q 001341 772 AADYSIG 778 (1096)
Q Consensus 772 ~aD~vl~ 778 (1096)
.|+++..
T Consensus 133 ~A~~I~~ 139 (169)
T TIGR02726 133 AAAYVTT 139 (169)
T ss_pred hCCEEcC
Confidence 9999875
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.8e-06 Score=99.55 Aligned_cols=158 Identities=15% Similarity=0.167 Sum_probs=93.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCCe----------------------EEEEcCCcH
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQ----------------------LLSIDGKTE 661 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~~----------------------~~~~~~~~~ 661 (1096)
.-+.+.++|+.|+++||.++++||+....+..+++++|+..+ ..+|. ++.-.+.+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~~ 513 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMAY 513 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCCcccccccccccCCCeEEEEcCCCH
Confidence 445789999999999999999999999999999999986321 01111 222233334
Q ss_pred HHHHHHHHHHHHHcc-------------cc---CC---------------------CCCcEEEEE--cChhHHHHHHHHH
Q 001341 662 DEVCRSLERVLLTMR-------------IT---TS---------------------EPKDVAFVV--DGWALEIALKHYR 702 (1096)
Q Consensus 662 ~~~~~~~~~~~~~~~-------------~~---~~---------------------~~~~~~lvi--~g~~l~~~~~~~~ 702 (1096)
+.+.+.++...+... .. +. ......+.. +.+.++.+.+.++
T Consensus 514 e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~~a~~a~~Re~seKIl~~gd~e~Leel~~~L~ 593 (694)
T PRK14502 514 KDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLKQAELAKQREYSETVHIEGDKRSTNIVLNHIQ 593 (694)
T ss_pred HHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHHHHHHHhhccCceeEEEcCCHHHHHHHHHHHH
Confidence 444443333222110 00 00 001112222 2333333333333
Q ss_pred HHHhhhhhccceeEEEeeCh-hhHHHHHHHHHhc----CCeEEEE--cCCccChhhhhhcCeeEEecCCch
Q 001341 703 KAFTELAILSRTAICCRVTP-SQKAQLVELLKSC----DYRTLAI--GDGGNDVRMIQKADIGVGISGREG 766 (1096)
Q Consensus 703 ~~f~~l~~~~~~~i~~r~tP-~qK~~iV~~lk~~----~~~v~~i--GDG~ND~~ml~~AdvGIam~g~~~ 766 (1096)
++ .+... ...-|..+++ .+|+..++.+.+. ...|+++ |||.||.+||+.||+||+|.+..+
T Consensus 594 ~~--~l~v~-~g~rfleI~~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~~ 661 (694)
T PRK14502 594 QS--GLEYS-FGGRFYEVTGGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPGN 661 (694)
T ss_pred Hc--CcEEE-ECCEEEEeCCCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCCC
Confidence 32 12111 2445666764 3799999988763 2445666 999999999999999999965544
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.7e-06 Score=90.13 Aligned_cols=156 Identities=16% Similarity=0.165 Sum_probs=88.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCCeE----------------------EEEcC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQL----------------------LSIDG 658 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~~~----------------------~~~~~ 658 (1096)
.+..-+++.++|++|+++|++++++||+....+..+..++|+..+ ..+|.. +...+
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~i~~~~ 92 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPFPVGAGREVGNYEVIELG 92 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccccccccccCCCeEEEEcC
Confidence 455667899999999999999999999999999999999997432 011112 22223
Q ss_pred CcHHHHHHHHHHHHHHcccc--C-----------------------CCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccc
Q 001341 659 KTEDEVCRSLERVLLTMRIT--T-----------------------SEPKDVAFVVDGWALEIALKHYRKAFTELAILSR 713 (1096)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~--~-----------------------~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~ 713 (1096)
.+.+.+...++...+..... . .+..+..+..+.+.+..+.+.+++ ..+.....
T Consensus 93 l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~e~~~~~~~~~~~--~~~~~~~s 170 (225)
T TIGR02461 93 KPVAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLWSREGWEAILVTARA--RGLKYTHG 170 (225)
T ss_pred CCHHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCCCHHHHHHHHHHHHH--cCCcEEEC
Confidence 33344433332221100000 0 000111112222223333222211 11111111
Q ss_pred eeEEEeeCh-hhHHHHHHHHHhc------CCeEEEEcCCccChhhhhhcCeeEEe
Q 001341 714 TAICCRVTP-SQKAQLVELLKSC------DYRTLAIGDGGNDVRMIQKADIGVGI 761 (1096)
Q Consensus 714 ~~i~~r~tP-~qK~~iV~~lk~~------~~~v~~iGDG~ND~~ml~~AdvGIam 761 (1096)
. -+..+.+ ..|+..++.+.+. ...++++||+.||++||+.||+||.+
T Consensus 171 ~-~~~~i~~~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v 224 (225)
T TIGR02461 171 G-RFYTVHGGSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV 224 (225)
T ss_pred C-EEEEECCCCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence 2 2233543 3699888887642 23699999999999999999999987
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.5e-06 Score=93.17 Aligned_cols=125 Identities=22% Similarity=0.322 Sum_probs=86.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++++.++.|+++|+++.++||.....+..+...+|+..--.. .+..++..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~--~~~~~~~~------------------------ 138 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFAN--RLEVEDGK------------------------ 138 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEee--EEEEECCE------------------------
Confidence 6899999999999999999999999999999999999998431100 00000000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEe-eChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCeeE
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGV 759 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r-~tP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGI 759 (1096)
++ ..+..+ ..+..|..+++.+.+ . .+.++++||+.||++|.+.|++++
T Consensus 139 ----~~-----------------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 139 ----LT-----------------------GLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred ----EE-----------------------EEecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 00 000111 122346666665543 2 246999999999999999999999
Q ss_pred EecCCchHHHHhhccccccccchhh
Q 001341 760 GISGREGLQAARAADYSIGKFRFLK 784 (1096)
Q Consensus 760 am~g~~~~~a~~~aD~vl~~f~~l~ 784 (1096)
++.+. ..+.++||++|.+.++..
T Consensus 192 ~~~~~--~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 192 AFNAK--PKLQQKADICINKKDLTD 214 (219)
T ss_pred EeCCC--HHHHHhchhccCCCCHHH
Confidence 99543 235569999998766543
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.33 E-value=6.9e-06 Score=88.19 Aligned_cols=151 Identities=20% Similarity=0.250 Sum_probs=88.0
Q ss_pred CChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC-CC--CCCCeEEEE--------------cCCcHHHHHHHHHH
Q 001341 608 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI-SP--EPKGQLLSI--------------DGKTEDEVCRSLER 670 (1096)
Q Consensus 608 ~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~-~~--~~~~~~~~~--------------~~~~~~~~~~~~~~ 670 (1096)
+.+.++|++|+++||++.++||+....+..+.+.+|+. .+ ..+|-.+.. ...+.+.+.+.++.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 98 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWREEPGYPRIILGISYGIIRLVLET 98 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccccCCCceEEecCCCHHHHHHHHHH
Confidence 34899999999999999999999999999999999974 11 011111211 11122222222221
Q ss_pred HHHHccc----c----------------------CCCCCcEEEEE--cChhHHHHHHHHHHHHhhhhhccceeEEEeeCh
Q 001341 671 VLLTMRI----T----------------------TSEPKDVAFVV--DGWALEIALKHYRKAFTELAILSRTAICCRVTP 722 (1096)
Q Consensus 671 ~~~~~~~----~----------------------~~~~~~~~lvi--~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP 722 (1096)
..+.... . ........+.. +.+.++.+.+.+.+ + .+.... ...+.++.|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~-~~~~~ei~~ 175 (221)
T TIGR02463 99 LSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRFTALLAD-L-GLAIVQ-GNRFSHVLG 175 (221)
T ss_pred HHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHHHHHHHH-c-CCeEEe-cCCeeEEec
Confidence 1111000 0 00011222233 23333333322222 1 121111 234668887
Q ss_pred h--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEe
Q 001341 723 S--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGI 761 (1096)
Q Consensus 723 ~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam 761 (1096)
. .|+..++.+.+ ..+.|+++||+.||.+|++.|++|||+
T Consensus 176 ~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 176 ASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 6 59888887754 246799999999999999999999987
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.2e-06 Score=86.59 Aligned_cols=129 Identities=21% Similarity=0.303 Sum_probs=86.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
.+-||+++.++.|++.|.+|.++||--..-+..+|.++||...+...+.+.++
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd--------------------------- 140 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFD--------------------------- 140 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeec---------------------------
Confidence 46799999999999999999999999999999999999995432111111110
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh--cCCeEEEEcCCccChhhhhhcCeeEEec
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS--CDYRTLAIGDGGNDVRMIQKADIGVGIS 762 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~--~~~~v~~iGDG~ND~~ml~~AdvGIam~ 762 (1096)
-+|+-+. |.... .-.....|++++..+++ ..+.++|||||+||.+|+..||.=||..
T Consensus 141 ----~~Gk~~g---------fd~~~--------ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 141 ----KDGKYLG---------FDTNE--------PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ----cCCcccc---------cccCC--------ccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 0110000 00000 00112369999999987 3467899999999999999988777775
Q ss_pred CCchH-HHHhhccccccccc
Q 001341 763 GREGL-QAARAADYSIGKFR 781 (1096)
Q Consensus 763 g~~~~-~a~~~aD~vl~~f~ 781 (1096)
|+--. +++..|++-+.+|.
T Consensus 200 g~~~r~~vk~nak~~~~~f~ 219 (227)
T KOG1615|consen 200 GNVIREGVKANAKWYVTDFY 219 (227)
T ss_pred CceEcHhhHhccHHHHHHHH
Confidence 55332 24446666555543
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.9e-06 Score=86.56 Aligned_cols=95 Identities=20% Similarity=0.180 Sum_probs=71.7
Q ss_pred HHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcCh
Q 001341 613 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 692 (1096)
Q Consensus 613 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 692 (1096)
+|+.|+++|+++.++||+....+..+....|+... +++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------~~~---------------------------------- 73 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------YQG---------------------------------- 73 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE--------Eec----------------------------------
Confidence 89999999999999999999999999999998310 000
Q ss_pred hHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHH-h---cCCeEEEEcCCccChhhhhhcCeeEEecCCchHH
Q 001341 693 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLK-S---CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 768 (1096)
Q Consensus 693 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk-~---~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 768 (1096)
...|...++.+. + ..+.++++||+.||++|++.|+++++| .+....
T Consensus 74 -----------------------------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v-~~~~~~ 123 (154)
T TIGR01670 74 -----------------------------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAV-ADAHPL 123 (154)
T ss_pred -----------------------------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEec-CCcCHH
Confidence 012333333332 2 346799999999999999999999999 444445
Q ss_pred HHhhccccccc
Q 001341 769 AARAADYSIGK 779 (1096)
Q Consensus 769 a~~~aD~vl~~ 779 (1096)
.+..||+++..
T Consensus 124 ~~~~a~~i~~~ 134 (154)
T TIGR01670 124 LIPRADYVTRI 134 (154)
T ss_pred HHHhCCEEecC
Confidence 66688988853
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=2e-05 Score=86.00 Aligned_cols=59 Identities=22% Similarity=0.260 Sum_probs=47.3
Q ss_pred EEEeeChh--hHHHHHHHHHhcCCeEEEEcC----CccChhhhhhc-CeeEEecCCchHHHHhhccc
Q 001341 716 ICCRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQKA-DIGVGISGREGLQAARAADY 775 (1096)
Q Consensus 716 i~~r~tP~--qK~~iV~~lk~~~~~v~~iGD----G~ND~~ml~~A-dvGIam~g~~~~~a~~~aD~ 775 (1096)
.+.+++|. +|+..++.|.+..+.|+++|| |.||++||+.| -.|+++ +|+...++..+.+
T Consensus 178 ~~leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v-~n~~~~~~~~~~~ 243 (247)
T PTZ00174 178 ISFDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSV-KNPEDTIKILKEL 243 (247)
T ss_pred eEEEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEe-CCHHHHHHHHHHH
Confidence 57788886 699999999877789999999 99999999976 577777 4655556555543
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=6.7e-06 Score=90.51 Aligned_cols=170 Identities=16% Similarity=0.226 Sum_probs=97.7
Q ss_pred cCCCChHHHHHHHHH-cCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEE-EcC------CcHHHHHHHHHHHHHH-c
Q 001341 605 RLQDGVPETIETLRK-AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-IDG------KTEDEVCRSLERVLLT-M 675 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~-aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~-~ 675 (1096)
.+.+++.++|+.|++ .|++++++|||....+..+....++.-...+|..+. .++ ... +....+...+.. .
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~-~~~~~i~~~l~~~~ 114 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPD-AIARDISVQLHTAL 114 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCCh-hHHHHHHHHHHHHh
Confidence 456789999999998 899999999999999988877666321111111111 111 111 111222222221 1
Q ss_pred c---ccCCCCCcEEEEEcCh-------hHHHHHHHHHHHHhhhhhccceeEEEeeChh--hHHHHHHHHHh-c---CCeE
Q 001341 676 R---ITTSEPKDVAFVVDGW-------ALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRT 739 (1096)
Q Consensus 676 ~---~~~~~~~~~~lvi~g~-------~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~--qK~~iV~~lk~-~---~~~v 739 (1096)
. ...-+.+..+++.... .+..+.+.+.+.+..+ ......-+.++.|. +|+..++.+.+ . ...+
T Consensus 115 ~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~-~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v 193 (266)
T PRK10187 115 AQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQL-ALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTP 193 (266)
T ss_pred ccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCce-EEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 0 0111222333333221 1111112222222211 12234466787786 79999887765 2 3679
Q ss_pred EEEcCCccChhhhhhc----CeeEEecCCchHHHHhhccccccccc
Q 001341 740 LAIGDGGNDVRMIQKA----DIGVGISGREGLQAARAADYSIGKFR 781 (1096)
Q Consensus 740 ~~iGDG~ND~~ml~~A----dvGIam~g~~~~~a~~~aD~vl~~f~ 781 (1096)
+++||+.||.+|++.+ +.||+| |+.. ..|++.|.+-.
T Consensus 194 ~~~GD~~nD~~mf~~~~~~~g~~vav-g~a~----~~A~~~l~~~~ 234 (266)
T PRK10187 194 VFVGDDLTDEAGFAVVNRLGGISVKV-GTGA----TQASWRLAGVP 234 (266)
T ss_pred EEEcCCccHHHHHHHHHhcCCeEEEE-CCCC----CcCeEeCCCHH
Confidence 9999999999999999 999999 7653 35777777643
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.9e-06 Score=86.26 Aligned_cols=95 Identities=20% Similarity=0.170 Sum_probs=72.1
Q ss_pred HHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Q 001341 612 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 691 (1096)
Q Consensus 612 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 691 (1096)
.+|+.|+++|+++.++||+....+..+++++|+... +.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~--------f~---------------------------------- 92 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL--------YQ---------------------------------- 92 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee--------ec----------------------------------
Confidence 689999999999999999999999999999997311 00
Q ss_pred hhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHH-Hhc---CCeEEEEcCCccChhhhhhcCeeEEecCCchH
Q 001341 692 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSC---DYRTLAIGDGGNDVRMIQKADIGVGISGREGL 767 (1096)
Q Consensus 692 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~l-k~~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~ 767 (1096)
....|...++.+ ++. ...+++|||+.||++|++.|++++++ ++...
T Consensus 93 -----------------------------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v-~~~~~ 142 (183)
T PRK09484 93 -----------------------------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAV-ADAHP 142 (183)
T ss_pred -----------------------------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEec-CChhH
Confidence 012243333333 232 35799999999999999999999988 55545
Q ss_pred HHHhhcccccc
Q 001341 768 QAARAADYSIG 778 (1096)
Q Consensus 768 ~a~~~aD~vl~ 778 (1096)
..+..||+++.
T Consensus 143 ~~~~~a~~v~~ 153 (183)
T PRK09484 143 LLLPRADYVTR 153 (183)
T ss_pred HHHHhCCEEec
Confidence 55668999985
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=2.3e-05 Score=82.99 Aligned_cols=122 Identities=24% Similarity=0.251 Sum_probs=85.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.||++++++.|+++ +++.++||.....+..+...+|+...-.. .+..++.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~------------------------- 119 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCH--SLEVDED------------------------- 119 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcc--eEEECCC-------------------------
Confidence 4689999999999999 99999999999999999999998421100 0000000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeE-EEe-eChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEec
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAI-CCR-VTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 762 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i-~~r-~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 762 (1096)
..+ ... ..|..|...++.++..+..++|+|||.||++|.++|++|+...
T Consensus 120 -----------------------------~~i~~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~ 170 (205)
T PRK13582 120 -----------------------------GMITGYDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR 170 (205)
T ss_pred -----------------------------CeEECccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC
Confidence 000 001 1367788888888877889999999999999999999999873
Q ss_pred CCchHHHHhhccc-cccccchhh
Q 001341 763 GREGLQAARAADY-SIGKFRFLK 784 (1096)
Q Consensus 763 g~~~~~a~~~aD~-vl~~f~~l~ 784 (1096)
..+ ......+++ ++.+++-+.
T Consensus 171 ~~~-~~~~~~~~~~~~~~~~el~ 192 (205)
T PRK13582 171 PPA-NVIAEFPQFPAVHTYDELL 192 (205)
T ss_pred CCH-HHHHhCCcccccCCHHHHH
Confidence 322 212234555 666655443
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.06 E-value=7e-05 Score=81.08 Aligned_cols=43 Identities=5% Similarity=0.036 Sum_probs=38.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 646 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 646 (1096)
+...+.+.++|++|+++||.++++||+.......+.+++++..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3466779999999999999999999999999999999999853
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.2e-05 Score=82.80 Aligned_cols=117 Identities=31% Similarity=0.336 Sum_probs=79.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.++|+.|+++|+++.++||-....+..++...|+..--.. .+..++.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~------------------------- 132 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSN--ELVFDEK------------------------- 132 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEE--EEEEcCC-------------------------
Confidence 5899999999999999999999999999999999999996321000 0111000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCeeEE
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVG 760 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIa 760 (1096)
| ..+...+....|..|..+++.+.+ . .+.++++||+.||++|.+.||++++
T Consensus 133 ------g-------------------~~~p~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a 187 (201)
T TIGR01491 133 ------G-------------------FIQPDGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISIS 187 (201)
T ss_pred ------C-------------------eEecceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEE
Confidence 0 000111223456678777776543 2 3569999999999999999999999
Q ss_pred ecCCchHHHHhhcc
Q 001341 761 ISGREGLQAARAAD 774 (1096)
Q Consensus 761 m~g~~~~~a~~~aD 774 (1096)
+ +..+.....++|
T Consensus 188 ~-~~~~~~~~~a~~ 200 (201)
T TIGR01491 188 L-GDEGHADYLAKD 200 (201)
T ss_pred E-CCCccchhhccc
Confidence 9 443333333444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.5e-05 Score=84.31 Aligned_cols=157 Identities=23% Similarity=0.258 Sum_probs=86.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCc-----HHHHHHHH---HHHHHHcc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT-----EDEVCRSL---ERVLLTMR 676 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~-----~~~~~~~~---~~~~~~~~ 676 (1096)
++.+.+.++|++|++.|+++.++||+....+..+..+.+..--..+|..+...+.. .+.....+ ++....+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 47788999999999999999999999999999998874421111112222222111 01111111 11000000
Q ss_pred cc-------CCCCC--cEEEEEcCh-hHHHHHHHHHHHHhh-------hhhccceeEEEeeChh--hHHHHHHHHHhc-C
Q 001341 677 IT-------TSEPK--DVAFVVDGW-ALEIALKHYRKAFTE-------LAILSRTAICCRVTPS--QKAQLVELLKSC-D 736 (1096)
Q Consensus 677 ~~-------~~~~~--~~~lvi~g~-~l~~~~~~~~~~f~~-------l~~~~~~~i~~r~tP~--qK~~iV~~lk~~-~ 736 (1096)
.. ..+.+ ...+...+. ........+.+.... +....+...+.++.|. .|+..++.+.+. +
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 00 00111 122222111 001111111111111 1111123456678885 799999987652 2
Q ss_pred ---CeEEEEcCCccChhhhhhcCeeEEe
Q 001341 737 ---YRTLAIGDGGNDVRMIQKADIGVGI 761 (1096)
Q Consensus 737 ---~~v~~iGDG~ND~~ml~~AdvGIam 761 (1096)
..++++||+.||.+|++.+++||+|
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 5699999999999999999999997
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=97.94 E-value=2e-05 Score=82.43 Aligned_cols=92 Identities=25% Similarity=0.287 Sum_probs=68.1
Q ss_pred CChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEE
Q 001341 608 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 687 (1096)
Q Consensus 608 ~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 687 (1096)
+++++.|+.++++|++++++||.....+..+++.+|+.... ++..+. .
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~----v~~~~~-~--------------------------- 139 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN----VIGNEL-F--------------------------- 139 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG----EEEEEE-E---------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE----EEEEee-e---------------------------
Confidence 66669999999999999999999999999999999985321 111000 0
Q ss_pred EEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChh-h--HHHHHHHH------HhcCCeEEEEcCCccChhhhh
Q 001341 688 VVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS-Q--KAQLVELL------KSCDYRTLAIGDGGNDVRMIQ 753 (1096)
Q Consensus 688 vi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~-q--K~~iV~~l------k~~~~~v~~iGDG~ND~~ml~ 753 (1096)
+. .......++++. + |...++.+ +.....++++|||.||.+|+|
T Consensus 140 --~~--------------------~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 140 --DN--------------------GGGIFTGRITGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp --CT--------------------TCCEEEEEEEEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred --ec--------------------ccceeeeeECCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 00 012344555555 4 99999999 345688999999999999996
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.90 E-value=5.7e-05 Score=80.61 Aligned_cols=112 Identities=15% Similarity=0.224 Sum_probs=74.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-+++||+++.++.|++.|+++.++||.....+..+....+.... ++. +.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-----i~~-n~------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-----IYC-NE------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-----EEe-ce-------------------------
Confidence 47999999999999999999999999999888888887643211 110 00
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeE-EEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEe
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAI-CCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 761 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i-~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam 761 (1096)
+..++..+.. .+. ..... |..-....|..+++.++.....++|||||.||.+|.+.||++++-
T Consensus 118 ---~~~~~~~~~~-------~~p-----~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar 181 (214)
T TIGR03333 118 ---ADFSNEYIHI-------DWP-----HPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFAR 181 (214)
T ss_pred ---eEeeCCeeEE-------eCC-----CCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEeh
Confidence 0001100000 000 00000 000113479999998887777899999999999999999997764
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.87 E-value=6.9e-05 Score=80.60 Aligned_cols=133 Identities=22% Similarity=0.331 Sum_probs=81.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|+++++++.|+++|+++.++||.....+..++..+|+.....-...+.++...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g------------------------ 139 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG------------------------ 139 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC------------------------
Confidence 47899999999999999999999999999999999999984211000000010000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhc--CCeEEEEcCCccChhhhhh--cCeeEE
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC--DYRTLAIGDGGNDVRMIQK--ADIGVG 760 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~--~~~v~~iGDG~ND~~ml~~--AdvGIa 760 (1096)
.+.|. ..... ...+..|...++.+.+. .+.++++||+.||+.|.++ ++++++
T Consensus 140 ---~~~g~-------------------~~~~~--~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~ 195 (224)
T PLN02954 140 ---EYAGF-------------------DENEP--TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIG 195 (224)
T ss_pred ---cEECc-------------------cCCCc--ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEe
Confidence 00000 00000 01123477777766542 2579999999999999888 455555
Q ss_pred ecCCc-hHHHHhhccccccccchhhh
Q 001341 761 ISGRE-GLQAARAADYSIGKFRFLKR 785 (1096)
Q Consensus 761 m~g~~-~~~a~~~aD~vl~~f~~l~~ 785 (1096)
..+.. .......+|+++.+++.+..
T Consensus 196 ~~~~~~~~~~~~~~~~~i~~~~el~~ 221 (224)
T PLN02954 196 YGGVQVREAVAAKADWFVTDFQDLIE 221 (224)
T ss_pred cCCCccCHHHHhcCCEEECCHHHHHH
Confidence 43222 12233368999887655443
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.81 E-value=3.7e-05 Score=73.80 Aligned_cols=95 Identities=23% Similarity=0.241 Sum_probs=74.9
Q ss_pred HHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcCh
Q 001341 613 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 692 (1096)
Q Consensus 613 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 692 (1096)
.|+.+.++||++.++||++..-+..-|+++|+-. ...|
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------~~qG---------------------------------- 80 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------LYQG---------------------------------- 80 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce--------eeec----------------------------------
Confidence 6999999999999999999999999999999921 1111
Q ss_pred hHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEecCCchHH
Q 001341 693 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 768 (1096)
Q Consensus 693 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 768 (1096)
-++|....+.+.+ ..+.|+++||-.||.|+|+..+.+++. ..+...
T Consensus 81 -----------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~-~dAh~~ 130 (170)
T COG1778 81 -----------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAV-ADAHPL 130 (170)
T ss_pred -----------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccc-cccCHH
Confidence 1244444444432 236799999999999999999999998 667777
Q ss_pred HHhhccccccc
Q 001341 769 AARAADYSIGK 779 (1096)
Q Consensus 769 a~~~aD~vl~~ 779 (1096)
.++.||+|+..
T Consensus 131 v~~~a~~Vt~~ 141 (170)
T COG1778 131 LKQRADYVTSK 141 (170)
T ss_pred HHHhhHhhhhc
Confidence 88899998863
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0034 Score=74.58 Aligned_cols=94 Identities=15% Similarity=0.153 Sum_probs=70.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
|+++++.+.+++++++|++++++|+-....+..+++..|+.+. ++..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~~------------------------- 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDGT------------------------- 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCCc-------------------------
Confidence 4789999999999999999999999999999999999998321 2211110
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEec
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 762 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 762 (1096)
.+..|+.|.+.+...-.. +.+.++||+.+|.+|.+.|+-.+++.
T Consensus 122 ---------------------------------~~~kg~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 122 ---------------------------------TNLKGAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred ---------------------------------cccCCchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC
Confidence 023455665544322111 23678899999999999999999993
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00048 Score=87.13 Aligned_cols=171 Identities=19% Similarity=0.175 Sum_probs=96.2
Q ss_pred CCCChHHHHHHHHH-cCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCc-------HHHHHHHHHHHHHHccc
Q 001341 606 LQDGVPETIETLRK-AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT-------EDEVCRSLERVLLTMRI 677 (1096)
Q Consensus 606 lr~~v~~~I~~l~~-aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 677 (1096)
+.+++.++|++|.+ .|+.|+++||+............++.--..+|..+...+.. .......+...++.+..
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~ 594 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVD 594 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHh
Confidence 56788999999999 69999999999999888776554431111112222211111 11112223323322211
Q ss_pred ----cCCCCCcEEEEEcC----hhH-HHHHHHHHHHHhhhh-----hccceeEEEeeChh--hHHHHHHHHHhc--CCeE
Q 001341 678 ----TTSEPKDVAFVVDG----WAL-EIALKHYRKAFTELA-----ILSRTAICCRVTPS--QKAQLVELLKSC--DYRT 739 (1096)
Q Consensus 678 ----~~~~~~~~~lvi~g----~~l-~~~~~~~~~~f~~l~-----~~~~~~i~~r~tP~--qK~~iV~~lk~~--~~~v 739 (1096)
.-.+.+...+..+- ..+ ....+++.+++..+. ......-+.++.|. +|+..++.+.+. ...+
T Consensus 595 ~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~v 674 (726)
T PRK14501 595 RTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFV 674 (726)
T ss_pred cCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEE
Confidence 11112223333321 111 111122222222211 11123344677775 799999988863 3579
Q ss_pred EEEcCCccChhhhhhc---CeeEEecCCchHHHHhhccccccccc
Q 001341 740 LAIGDGGNDVRMIQKA---DIGVGISGREGLQAARAADYSIGKFR 781 (1096)
Q Consensus 740 ~~iGDG~ND~~ml~~A---dvGIam~g~~~~~a~~~aD~vl~~f~ 781 (1096)
+++||+.||.+|++.+ +.||+| |+. ..+|++.+.+-+
T Consensus 675 l~~GD~~nDe~Mf~~~~~~~~~v~v-G~~----~s~A~~~l~~~~ 714 (726)
T PRK14501 675 LAIGDDTTDEDMFRALPETAITVKV-GPG----ESRARYRLPSQR 714 (726)
T ss_pred EEECCCCChHHHHHhcccCceEEEE-CCC----CCcceEeCCCHH
Confidence 9999999999999986 588888 653 357888888643
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00014 Score=75.82 Aligned_cols=114 Identities=18% Similarity=0.209 Sum_probs=75.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.. ++. +....+ . .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--i~~-~~~~~~------------------~-~ 128 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIE--IYS-NPASFD------------------N-D 128 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeE--Eec-cCceEC------------------C-C
Confidence 47899999999999999999999999999999999888887432110 110 000000 0 0
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEee-ChhhHHHHHHHHHhc-CCeEEEEcCCccChhhhhhcCeeEE
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-TPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVG 760 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~-tP~qK~~iV~~lk~~-~~~v~~iGDG~ND~~ml~~AdvGIa 760 (1096)
.. +... ..+...|... ....|.++++.++.. ...++++|||.||+.|.++||+-.|
T Consensus 129 g~-~~~~--------------------~~~~~~~~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 129 GR-HIVW--------------------PHHCHGCCSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred Cc-EEEe--------------------cCCCCccCcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 00 0000 0001111111 123599999998876 7889999999999999999987543
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00019 Score=76.95 Aligned_cols=111 Identities=16% Similarity=0.258 Sum_probs=72.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
+++||+.+.++.|++.|+++.++||-....+..+.+.. +.. . . ++..+.
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~-~-~--i~~n~~-------------------------- 122 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK-E-Q--IYCNGS-------------------------- 122 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc-C-c--EEEeEE--------------------------
Confidence 68999999999999999999999999999999888887 532 1 1 111000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEE-eeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEe
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC-RVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 761 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~-r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam 761 (1096)
..+|..+... +. ......+ ......|..+++.++.....+++||||.||+.|.+.||+.++-
T Consensus 123 ---~~~~~~~~~~-------kp-----~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 123 ---DFSGEYITIT-------WP-----HPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred ---EecCCeeEEe-------cc-----CCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 0011000000 00 0000000 0011348888888877667899999999999999999996663
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00017 Score=74.26 Aligned_cols=100 Identities=21% Similarity=0.231 Sum_probs=68.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcE
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 685 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (1096)
+++++++.++.+++.|++++++||.....+..++...|+..--.+ .+..++..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~--~~~~~~~g------------------------- 126 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFAN--RLEFDDNG------------------------- 126 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheee--eEEECCCC-------------------------
Confidence 579999999999999999999999999999999999987421100 01110000
Q ss_pred EEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhc----CCeEEEEcCCccChhhhhhc
Q 001341 686 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKA 755 (1096)
Q Consensus 686 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~A 755 (1096)
.++|.. .++ -...+..|..+++.+.+. ...++++|||.||.+|++.|
T Consensus 127 --~~~g~~-----------------~~~----~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 127 --LLTGPI-----------------EGQ----VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred --EEeCcc-----------------CCc----ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 000000 000 023456799888887643 35699999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00021 Score=75.41 Aligned_cols=108 Identities=14% Similarity=0.077 Sum_probs=75.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEE-EcCCcHHHHHHHHHHHHHHccccCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-IDGKTEDEVCRSLERVLLTMRITTSE 681 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1096)
..++.+++.+.|+.++++|++++++||.....+..+++.+|+..--.. .+.. .+|
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~-~l~~~~~g----------------------- 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGT-RLEESEDG----------------------- 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEec-ceEEcCCC-----------------------
Confidence 457899999999999999999999999999999999999998321000 0000 000
Q ss_pred CCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCe
Q 001341 682 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADI 757 (1096)
Q Consensus 682 ~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~Adv 757 (1096)
..+|+. ..-.+.++.|...++.+.+ .+ +.++++||+.+|.+|++.|+.
T Consensus 141 ------~~~g~~----------------------~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~ 192 (202)
T TIGR01490 141 ------IYTGNI----------------------DGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGH 192 (202)
T ss_pred ------EEeCCc----------------------cCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCC
Confidence 000100 0001245678777766543 33 368999999999999999999
Q ss_pred eEEec
Q 001341 758 GVGIS 762 (1096)
Q Consensus 758 GIam~ 762 (1096)
++.+.
T Consensus 193 ~~~v~ 197 (202)
T TIGR01490 193 PYVVN 197 (202)
T ss_pred cEEeC
Confidence 99883
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00047 Score=75.09 Aligned_cols=155 Identities=20% Similarity=0.302 Sum_probs=92.7
Q ss_pred HHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCC----CCeEEEE--cCCcHHHHHH---------HHHHHHHHc--
Q 001341 613 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP----KGQLLSI--DGKTEDEVCR---------SLERVLLTM-- 675 (1096)
Q Consensus 613 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~----~~~~~~~--~~~~~~~~~~---------~~~~~~~~~-- 675 (1096)
.++...+.++.+.++||++...+..+..+.++..|+. .|..++. +.....+-.+ .+++.+..+
T Consensus 27 ~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~ 106 (247)
T PF05116_consen 27 LLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPG 106 (247)
T ss_dssp HHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCC
T ss_pred HHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhC
Confidence 3333557889999999999999999999999876531 1212233 1111111111 122222222
Q ss_pred -ccc---CCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhcc----ceeEEEeeChh--hHHHHHHHHHhc----CCeEEE
Q 001341 676 -RIT---TSEPKDVAFVVDGWALEIALKHYRKAFTELAILS----RTAICCRVTPS--QKAQLVELLKSC----DYRTLA 741 (1096)
Q Consensus 676 -~~~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~----~~~i~~r~tP~--qK~~iV~~lk~~----~~~v~~ 741 (1096)
... .....+.+..++.......++.+.+.+..-...+ +..-+.++.|. .|...|+.+++. .+.|++
T Consensus 107 l~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~ 186 (247)
T PF05116_consen 107 LRPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLV 186 (247)
T ss_dssp EEEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEE
T ss_pred cccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEE
Confidence 111 1223466677777666555555655554322222 22345778886 799999999863 357889
Q ss_pred EcCCccChhhhhhcCeeEEecCCchHH
Q 001341 742 IGDGGNDVRMIQKADIGVGISGREGLQ 768 (1096)
Q Consensus 742 iGDG~ND~~ml~~AdvGIam~g~~~~~ 768 (1096)
+||+.||.+||..++-||.+ ||+..+
T Consensus 187 aGDSgND~~mL~~~~~~vvV-~Na~~e 212 (247)
T PF05116_consen 187 AGDSGNDLEMLEGGDHGVVV-GNAQPE 212 (247)
T ss_dssp EESSGGGHHHHCCSSEEEE--TTS-HH
T ss_pred EeCCCCcHHHHcCcCCEEEE-cCCCHH
Confidence 99999999999999999999 776554
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0004 Score=74.42 Aligned_cols=119 Identities=24% Similarity=0.243 Sum_probs=84.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 682 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1096)
+.++-|++++++..|+++|++..++|++....+..+.+..|+...-..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~-------------------------------- 134 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDV-------------------------------- 134 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccce--------------------------------
Confidence 567899999999999999999999999999999999999998543211
Q ss_pred CcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEee------ChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcC
Q 001341 683 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 756 (1096)
Q Consensus 683 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~------tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Ad 756 (1096)
.++++- .|.....+++.+....+.++||||..+|+.|=++|+
T Consensus 135 --------------------------------i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag 182 (220)
T COG0546 135 --------------------------------IVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAG 182 (220)
T ss_pred --------------------------------EEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcC
Confidence 111121 233333444444433347999999999999999999
Q ss_pred ---eeEEecCC-chHHHHh-hccccccccchhhhH
Q 001341 757 ---IGVGISGR-EGLQAAR-AADYSIGKFRFLKRL 786 (1096)
Q Consensus 757 ---vGIam~g~-~~~~a~~-~aD~vl~~f~~l~~l 786 (1096)
|||.. |. ....... .+|+++.+...|...
T Consensus 183 ~~~v~v~~-g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 183 VPAVGVTW-GYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CCEEEEEC-CCCCCcchhhcCCCEEECCHHHHHHH
Confidence 55554 32 2233344 689999887665543
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00026 Score=68.86 Aligned_cols=117 Identities=19% Similarity=0.221 Sum_probs=74.2
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCC
Q 001341 602 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 681 (1096)
Q Consensus 602 ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1096)
-..++.+++++.++.|+++|++++++||.....+......+|+...... ++..++........ .
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~~--------------~ 84 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDP--VITSNGAAIYYPKE--------------G 84 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhh--eeccchhhhhcccc--------------c
Confidence 3458899999999999999999999999999999999999988432211 11111110000000 0
Q ss_pred CCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhh-cCeeEE
Q 001341 682 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQK-ADIGVG 760 (1096)
Q Consensus 682 ~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~-AdvGIa 760 (1096)
.........+.+-.|..+..+.+.+......++++||+.+|+.|.+. ..-+|+
T Consensus 85 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 85 --------------------------LFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred --------------------------ccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 00001122233344445555666555455779999999999999998 444443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0018 Score=70.52 Aligned_cols=67 Identities=24% Similarity=0.373 Sum_probs=49.9
Q ss_pred HHHHHHHhhhhhccce--eEEEeeChh--hHHHHHHHHHhcCCeEEEEcC----CccChhhhhh-cCeeEEecCCch
Q 001341 699 KHYRKAFTELAILSRT--AICCRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQK-ADIGVGISGREG 766 (1096)
Q Consensus 699 ~~~~~~f~~l~~~~~~--~i~~r~tP~--qK~~iV~~lk~~~~~v~~iGD----G~ND~~ml~~-AdvGIam~g~~~ 766 (1096)
+.+.++|.++...... ..+.+++|. +|+..++.|+ ..+.|+++|| |.||.+||+. -=.|+.++|-+.
T Consensus 160 ~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 160 SVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred HHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 3455555443332222 368899987 6999999999 7788999999 8999999996 677888866543
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00044 Score=74.35 Aligned_cols=123 Identities=24% Similarity=0.279 Sum_probs=81.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
.++.||+.+.++.|+++|+++.++||.....+..+.+..|+...-.. ++ .+
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~--~~------------------------- 142 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--VI--GG------------------------- 142 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE--EE--cC-------------------------
Confidence 46889999999999999999999999999999999999988432110 00 00
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCe-eEE
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVG 760 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv-GIa 760 (1096)
.. +.+..| +--..+++.++...+.+++|||+.||+.|.+.|++ +|+
T Consensus 143 ------------------------------~~-~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~ 191 (226)
T PRK13222 143 ------------------------------DS-LPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVG 191 (226)
T ss_pred ------------------------------CC-CCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEE
Confidence 00 001112 11122333333345679999999999999999999 556
Q ss_pred ec-CCc-hHHH-HhhccccccccchhhhH
Q 001341 761 IS-GRE-GLQA-ARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 761 m~-g~~-~~~a-~~~aD~vl~~f~~l~~l 786 (1096)
+. |.. ..+. ...+|+++.++..+...
T Consensus 192 v~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 220 (226)
T PRK13222 192 VTYGYNYGEPIALSEPDVVIDHFAELLPL 220 (226)
T ss_pred ECcCCCCccchhhcCCCEEECCHHHHHHH
Confidence 52 211 1122 23688888887766554
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00051 Score=72.75 Aligned_cols=123 Identities=20% Similarity=0.231 Sum_probs=78.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.++++.|+++|+++.++||.....+.......|+...-+. ++..+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~--i~~~~--------------------------- 125 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH--VIGSD--------------------------- 125 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee--EEecC---------------------------
Confidence 7889999999999999999999999998888888888888321110 00000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeE-Ee-c
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI-S 762 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am-~ 762 (1096)
.....+-.|.-=..+++.++-..+.+++|||+.+|+.+-++|++.. ++ .
T Consensus 126 -----------------------------~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~ 176 (205)
T TIGR01454 126 -----------------------------EVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALW 176 (205)
T ss_pred -----------------------------cCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 0000011111112233333323567999999999999999999975 33 1
Q ss_pred C--CchHHHHhhccccccccchhhh
Q 001341 763 G--REGLQAARAADYSIGKFRFLKR 785 (1096)
Q Consensus 763 g--~~~~~a~~~aD~vl~~f~~l~~ 785 (1096)
| ....-....+|+++.++..+..
T Consensus 177 g~~~~~~l~~~~~~~~~~~~~~l~~ 201 (205)
T TIGR01454 177 GEGDAGELLAARPDFLLRKPQSLLA 201 (205)
T ss_pred cCCChhhhhhcCCCeeeCCHHHHHH
Confidence 2 2211233478999887655543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00079 Score=71.70 Aligned_cols=41 Identities=20% Similarity=0.248 Sum_probs=38.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
++.|++.++++.|+++|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 68899999999999999999999999999999999988884
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0011 Score=73.41 Aligned_cols=120 Identities=21% Similarity=0.235 Sum_probs=78.9
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 682 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1096)
..++.|++.++|+.|+++|+++.++||.....+..+....|+...-.
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~--------------------------------- 145 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFR--------------------------------- 145 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCe---------------------------------
Confidence 34788999999999999999999999998888888877777622100
Q ss_pred CcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhH--HHHHH-HHHh---cCCeEEEEcCCccChhhhhhcC
Q 001341 683 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK--AQLVE-LLKS---CDYRTLAIGDGGNDVRMIQKAD 756 (1096)
Q Consensus 683 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK--~~iV~-~lk~---~~~~v~~iGDG~ND~~ml~~Ad 756 (1096)
..++++..+..| ...++ .+++ ..+.+++|||+.||+.|.+.|+
T Consensus 146 -------------------------------~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aG 194 (272)
T PRK13223 146 -------------------------------WIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAG 194 (272)
T ss_pred -------------------------------EEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCC
Confidence 112222222222 12222 2222 3467999999999999999999
Q ss_pred ee-EEec-C-CchHHHH-hhccccccccchhhhH
Q 001341 757 IG-VGIS-G-REGLQAA-RAADYSIGKFRFLKRL 786 (1096)
Q Consensus 757 vG-Iam~-g-~~~~~a~-~~aD~vl~~f~~l~~l 786 (1096)
+. +++. | ....+.. ..+|+++.+...+..+
T Consensus 195 i~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~ 228 (272)
T PRK13223 195 VQCVALSYGYNHGRPIAEESPALVIDDLRALLPG 228 (272)
T ss_pred CeEEEEecCCCCchhhhhcCCCEEECCHHHHHHH
Confidence 84 4442 2 1222223 3789998876655543
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0017 Score=74.07 Aligned_cols=217 Identities=17% Similarity=0.228 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHhhhhchHHHHHHHHHH------HhhcCcEEEEEeecccc----CCCChHHHHHHHHHcCCeEEEEC
Q 001341 559 EDEYQEWSLMFKEASSTLIDREWRIAEVCQ------RLEHDLKVLGVTAIEDR----LQDGVPETIETLRKAGINFWMLT 628 (1096)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~------~~e~~l~llG~~~ieD~----lr~~v~~~I~~l~~aGIkv~mlT 628 (1096)
+++|..|..+|-.|..+++. +..... .+.-|.++.-++ .|| +-++++++++.|.+.. .|.++|
T Consensus 91 ~~~~~~~~~~~p~al~~~~~----~~~~~~~k~~~LfLDyDGTLaPIv--~~Pd~A~~s~~~~~aL~~La~~~-~VAIVS 163 (384)
T PLN02580 91 DFAYRTWMLKYPSALTSFEQ----IANFAKGKKIALFLDYDGTLSPIV--DDPDRALMSDAMRSAVKNVAKYF-PTAIIS 163 (384)
T ss_pred hHHHHHHHHhCcHHHHHHHH----HHHHhhcCCeEEEEecCCccCCCC--CCcccccCCHHHHHHHHHHhhCC-CEEEEe
Confidence 45788898887766655432 111111 112344444333 222 3567889999998874 899999
Q ss_pred CCcHhHHHHHHHHcCCCCCCCCCeEEE-------------------EcCCc------HHHHH---HHHHHHHHHc----c
Q 001341 629 GDKQNTAIQIALSCNFISPEPKGQLLS-------------------IDGKT------EDEVC---RSLERVLLTM----R 676 (1096)
Q Consensus 629 GD~~~ta~~ia~~~gl~~~~~~~~~~~-------------------~~~~~------~~~~~---~~~~~~~~~~----~ 676 (1096)
||..........-.++.-....|--+. ..+.+ ..+.. ..+.+.+... .
T Consensus 164 GR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~p 243 (384)
T PLN02580 164 GRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIK 243 (384)
T ss_pred CCCHHHHHHHhCCCCccEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCC
Confidence 999998877654333311111110000 00110 01111 1111111111 1
Q ss_pred ccCCCCCcEEEEEcChh-----HHHHHHHHHHH---HhhhhhccceeEEEeeChh---hHHHHHHHHHhc-C---C---e
Q 001341 677 ITTSEPKDVAFVVDGWA-----LEIALKHYRKA---FTELAILSRTAICCRVTPS---QKAQLVELLKSC-D---Y---R 738 (1096)
Q Consensus 677 ~~~~~~~~~~lvi~g~~-----l~~~~~~~~~~---f~~l~~~~~~~i~~r~tP~---qK~~iV~~lk~~-~---~---~ 738 (1096)
-..-+.++.++.+.-.. -+...+.+.+. +..+. +....-+.++.|. +|+..|+.+.+. + . .
T Consensus 244 Gs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~-v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~ 322 (384)
T PLN02580 244 GAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLR-LTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVL 322 (384)
T ss_pred CCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceE-EEeCCeEEEEecCCCCCHHHHHHHHHHhcCCCccccee
Confidence 11224455565543221 12222222222 21121 1222345688874 899999987652 2 1 2
Q ss_pred EEEEcCCccChhhhhh-----cCeeEEecCCchHHHHhhccccccccchhhhH
Q 001341 739 TLAIGDGGNDVRMIQK-----ADIGVGISGREGLQAARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 739 v~~iGDG~ND~~ml~~-----AdvGIam~g~~~~~a~~~aD~vl~~f~~l~~l 786 (1096)
++++||+.||..|++. +++||+| |+... .-.|+|.|.+-.-...+
T Consensus 323 pi~iGDD~TDedmF~~L~~~~~G~~I~V-gn~~~--~t~A~y~L~dp~eV~~~ 372 (384)
T PLN02580 323 PIYIGDDRTDEDAFKVLREGNRGYGILV-SSVPK--ESNAFYSLRDPSEVMEF 372 (384)
T ss_pred EEEECCCchHHHHHHhhhccCCceEEEE-ecCCC--CccceEEcCCHHHHHHH
Confidence 4899999999999996 5899999 54321 12678888775444333
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0033 Score=68.53 Aligned_cols=175 Identities=15% Similarity=0.136 Sum_probs=90.2
Q ss_pred CCCChHHHHHHHHHc-CCeEEEECCCcHhHHHHHHH--HcCCCCCCCCCeEEEEcCCcH------------HHHHHHHHH
Q 001341 606 LQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIAL--SCNFISPEPKGQLLSIDGKTE------------DEVCRSLER 670 (1096)
Q Consensus 606 lr~~v~~~I~~l~~a-GIkv~mlTGD~~~ta~~ia~--~~gl~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 670 (1096)
+-+++.++++.|.+. +..|+++||+.......... .+++... .|..+..+|... .+....+.+
T Consensus 26 ~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~--hG~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 103 (244)
T TIGR00685 26 VSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGE--HGCEMKDNGSCQDWVNLTEKIPSWKVRANELRE 103 (244)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEee--cCEEEecCCCcceeeechhhhhhHHHHHHHHHH
Confidence 457888999999766 56789999997765544321 1122211 111222122210 111112222
Q ss_pred HHHHccccCCCCCcEEEEEcChhH---HHHHHHHHHHHhhhh-----hccceeEEEeeChh--hHHHHHHHHHhc----C
Q 001341 671 VLLTMRITTSEPKDVAFVVDGWAL---EIALKHYRKAFTELA-----ILSRTAICCRVTPS--QKAQLVELLKSC----D 736 (1096)
Q Consensus 671 ~~~~~~~~~~~~~~~~lvi~g~~l---~~~~~~~~~~f~~l~-----~~~~~~i~~r~tP~--qK~~iV~~lk~~----~ 736 (1096)
......-..-+.+..++.++-..- +.......+....+. .+.....+.++.|. +|+..++.+.+. .
T Consensus 104 ~~~~~pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~ 183 (244)
T TIGR00685 104 EITTRPGVFIERKGVALAWHYRQAPVPELARFRAKELKEKILSFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQPGSG 183 (244)
T ss_pred HHhcCCCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHhcCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcccCC
Confidence 222211111234555665542211 112111111111111 11123334555554 799888877652 3
Q ss_pred CeEEEEcCCccChhhhhhc--------CeeEEecCCchHHHHhhccccccccchhhh
Q 001341 737 YRTLAIGDGGNDVRMIQKA--------DIGVGISGREGLQAARAADYSIGKFRFLKR 785 (1096)
Q Consensus 737 ~~v~~iGDG~ND~~ml~~A--------dvGIam~g~~~~~a~~~aD~vl~~f~~l~~ 785 (1096)
..++++||+.||.+|++.+ ..||.|. .+ ..+..|++++.+...+..
T Consensus 184 ~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g-~~~~~A~~~~~~~~~v~~ 237 (244)
T TIGR00685 184 ISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SG-SKKTVAKFHLTGPQQVLE 237 (244)
T ss_pred CceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cC-CcCCCceEeCCCHHHHHH
Confidence 5799999999999999999 4777773 22 134578999887655433
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0014 Score=69.85 Aligned_cols=123 Identities=19% Similarity=0.184 Sum_probs=78.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.||+.++++.|+++|+++.++||.....+..+....|+...-.. ++..+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~--i~~~~~-------------------------- 133 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDV--VITLDD-------------------------- 133 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeE--EEecCc--------------------------
Confidence 4789999999999999999999999999999988888888432110 000000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeE-Ee-c
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI-S 762 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am-~ 762 (1096)
.-..+-.|+--..+++.+......+++|||+.+|+.+-++|++-. ++ .
T Consensus 134 ------------------------------~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~ 183 (214)
T PRK13288 134 ------------------------------VEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAW 183 (214)
T ss_pred ------------------------------CCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcC
Confidence 000011121112233333333467999999999999999999854 33 1
Q ss_pred CCc-hHHHHh-hccccccccchhhh
Q 001341 763 GRE-GLQAAR-AADYSIGKFRFLKR 785 (1096)
Q Consensus 763 g~~-~~~a~~-~aD~vl~~f~~l~~ 785 (1096)
|.. ..+... .+|+++.+++.+..
T Consensus 184 g~~~~~~l~~~~~~~~i~~~~~l~~ 208 (214)
T PRK13288 184 TIKGREYLEQYKPDFMLDKMSDLLA 208 (214)
T ss_pred CCCCHHHHhhcCcCEEECCHHHHHH
Confidence 322 222322 58888887665544
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0018 Score=69.60 Aligned_cols=43 Identities=12% Similarity=0.174 Sum_probs=38.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 646 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 646 (1096)
-++-|++.++|+.|++.|+++.++||.....+..+.+..|+..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 133 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD 133 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh
Confidence 4688999999999999999999999999999999998888743
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0046 Score=65.52 Aligned_cols=106 Identities=17% Similarity=0.147 Sum_probs=73.0
Q ss_pred cCCCChHHHHH-HHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 605 RLQDGVPETIE-TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 605 ~lr~~v~~~I~-~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
.+.|++.++|+ .++++|++++++|+-....+..+|+..++...+. ++..+ .+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~---~i~t~-le----------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN---LIASQ-IE----------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc---EEEEE-eE-----------------------
Confidence 57899999995 8899999999999999999999999876644221 22111 00
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh-cCCeEEEEcCCccChhhhhhcCeeEEec
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGIS 762 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~-~~~~v~~iGDG~ND~~ml~~AdvGIam~ 762 (1096)
+.+|. ....-.|.-++|..-++..-. ......+-||+.||.|||+.||.++++.
T Consensus 147 ----~~~gg---------------------~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 147 ----RGNGG---------------------WVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ----EeCCc---------------------eEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 00110 001123455678776664432 2245678999999999999999999993
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0034 Score=68.87 Aligned_cols=124 Identities=15% Similarity=0.170 Sum_probs=80.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+|++++++.|+++|+++.++|+.....+..+-..+|+...-.. ++.-+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--ii~~~d-------------------------- 160 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSV--VLAAED-------------------------- 160 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcE--EEeccc--------------------------
Confidence 5789999999999999999999999999999998888887432111 110000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeE-EecC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GISG 763 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am~g 763 (1096)
.-..+-.|+-=..+++.+.-....+++|||..+|+.+=++|++-+ ++.|
T Consensus 161 ------------------------------~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 161 ------------------------------VYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred ------------------------------CCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEec
Confidence 000000111111222333323467999999999999999999855 5544
Q ss_pred CchHHHHhhccccccccchhhhH
Q 001341 764 REGLQAARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 764 ~~~~~a~~~aD~vl~~f~~l~~l 786 (1096)
.........+|+++.+++.+...
T Consensus 211 ~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 211 KHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred CCchhhhccCCEEeCCHHHHHHH
Confidence 43333334678888877665544
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0027 Score=68.46 Aligned_cols=124 Identities=19% Similarity=0.146 Sum_probs=78.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.||+.+.++.|++.|+++.++|+.....+..+-...|+...-. .+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~---~i~----------------------------- 142 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA---VLI----------------------------- 142 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc---EEE-----------------------------
Confidence 578999999999999999999999999888887777787732110 000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeE-Ee-c
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI-S 762 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am-~ 762 (1096)
.+. ..-..+-.|+-=..+++.+.-..+.+++|||+.+|+.|-+.|++.. ++ .
T Consensus 143 -----~~~---------------------~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~ 196 (229)
T PRK13226 143 -----GGD---------------------TLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALW 196 (229)
T ss_pred -----ecC---------------------cCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEee
Confidence 000 0000011121112333444334577999999999999999999875 33 1
Q ss_pred CCc-h-HHH-HhhccccccccchhhhH
Q 001341 763 GRE-G-LQA-ARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 763 g~~-~-~~a-~~~aD~vl~~f~~l~~l 786 (1096)
|.. . ... ...+|+++.++.-|...
T Consensus 197 g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 197 GYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred cCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 221 1 112 23589999887665443
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0048 Score=68.19 Aligned_cols=117 Identities=15% Similarity=0.154 Sum_probs=78.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.++++.|+++|+++.++|+.....+..+.+..|+...-.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~----------------------------------- 186 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS----------------------------------- 186 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE-----------------------------------
Confidence 578999999999999999999999999999999999999843210
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh---cCCeEEEEcCCccChhhhhhcCeeEE-
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS---CDYRTLAIGDGGNDVRMIQKADIGVG- 760 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~---~~~~v~~iGDG~ND~~ml~~AdvGIa- 760 (1096)
.+++++..+..+.-+.+.+++ ..+.+++|||+.+|+.+-++|++-..
T Consensus 187 -----------------------------~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~ 237 (273)
T PRK13225 187 -----------------------------VVQAGTPILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVA 237 (273)
T ss_pred -----------------------------EEEecCCCCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEE
Confidence 011111111111222223332 34579999999999999999998752
Q ss_pred e-cCCchH-HH-Hhhccccccccchhhh
Q 001341 761 I-SGREGL-QA-ARAADYSIGKFRFLKR 785 (1096)
Q Consensus 761 m-~g~~~~-~a-~~~aD~vl~~f~~l~~ 785 (1096)
+ .|.... +. ...+|+++.++..+..
T Consensus 238 v~~g~~~~~~l~~~~ad~~i~~~~eL~~ 265 (273)
T PRK13225 238 VTWGFNDRQSLVAACPDWLLETPSDLLQ 265 (273)
T ss_pred EecCCCCHHHHHHCCCCEEECCHHHHHH
Confidence 2 232222 12 2358999887666544
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.001 Score=55.82 Aligned_cols=44 Identities=20% Similarity=0.190 Sum_probs=37.3
Q ss_pred ccccCCCCceeecCC-CccchhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001341 12 TSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWS 59 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k-~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~ 59 (1096)
+|+++||.|+++.++ .++| +.+++||.++++++++++++++++.
T Consensus 18 ~r~~~~G~N~l~~~~~~s~~----~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 18 RRLERYGPNELPPPKKRSPL----LRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred HHHHHhCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 588999999999987 4555 8899999999998888888887753
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0063 Score=65.09 Aligned_cols=120 Identities=14% Similarity=0.138 Sum_probs=72.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.||+.++++.|+++|+++.++|+.....+...-...|+... .. ++..+ +.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-~~--i~~~~-----~~-------------------- 134 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-EV--FVTAE-----RV-------------------- 134 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-cE--EEEHH-----Hh--------------------
Confidence 5789999999999999999999999887766655556665211 10 11000 00
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCee-EEecC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGISG 763 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG-Iam~g 763 (1096)
-..+-.|+-=..+.+.+.-..+.+++|||..+|+.+=+.|++. |++..
T Consensus 135 -------------------------------~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~ 183 (218)
T PRK11587 135 -------------------------------KRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNA 183 (218)
T ss_pred -------------------------------cCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECC
Confidence 0000011111122222222357799999999999999999985 46633
Q ss_pred CchHHHHhhccccccccchh
Q 001341 764 REGLQAARAADYSIGKFRFL 783 (1096)
Q Consensus 764 ~~~~~a~~~aD~vl~~f~~l 783 (1096)
.........+|+++.+++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 184 PADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CCchhhhccCCEEecchhhe
Confidence 22222223678888776554
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.014 Score=61.97 Aligned_cols=106 Identities=14% Similarity=0.124 Sum_probs=73.1
Q ss_pred cCCCChHHHH-HHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 605 RLQDGVPETI-ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 605 ~lr~~v~~~I-~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
.+.|++.++| +.+++.|++++++|+-...-+..++...|+...+ . ++..+-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~--~i~t~l------------------------- 146 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-N--LIASQM------------------------- 146 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-c--eEEEEE-------------------------
Confidence 5589999999 5788999999999999999999999999963211 1 221110
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHH-HhcCCeEEEEcCCccChhhhhhcCeeEEec
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQKADIGVGIS 762 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~l-k~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 762 (1096)
....+| ......+..+.|..-++.. ........+-||+.||.|||+.|+.++++.
T Consensus 147 --~~~~tg----------------------~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 147 --QRRYGG----------------------WVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred --EEEEcc----------------------EECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 000011 0111234556787766644 223345678999999999999999999993
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0092 Score=65.45 Aligned_cols=42 Identities=26% Similarity=0.222 Sum_probs=37.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 646 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 646 (1096)
++.||+.++++.|+++|+++.++||.....+..+-+..|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 467999999999999999999999999999888888888744
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.015 Score=64.35 Aligned_cols=41 Identities=24% Similarity=0.174 Sum_probs=35.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
++-||+.++|+.|++.|+++.++||.....+..+-+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56899999999999999999999999998887777776653
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0097 Score=68.04 Aligned_cols=118 Identities=16% Similarity=0.188 Sum_probs=79.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+|+.++++.|+++|+++.++|+.....+..+-+..||...-+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd----------------------------------- 260 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS----------------------------------- 260 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce-----------------------------------
Confidence 477999999999999999999999999999999999999843211
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEee----Chhh--HHHHHHHHHhcCCeEEEEcCCccChhhhhhcCee
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TPSQ--KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 758 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~----tP~q--K~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 758 (1096)
..+++.- .|.- =...++.+.-..+.+++|||..+|+.+-+.|++-
T Consensus 261 -----------------------------~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~ 311 (381)
T PLN02575 261 -----------------------------VIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMK 311 (381)
T ss_pred -----------------------------EEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCE
Confidence 1111111 1211 1122333333457799999999999999999987
Q ss_pred E-EecCCchHHHHhhccccccccchhhhH
Q 001341 759 V-GISGREGLQAARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 759 I-am~g~~~~~a~~~aD~vl~~f~~l~~l 786 (1096)
. ++.+.........||+++.+++.+...
T Consensus 312 ~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~ 340 (381)
T PLN02575 312 CVAVASKHPIYELGAADLVVRRLDELSIV 340 (381)
T ss_pred EEEECCCCChhHhcCCCEEECCHHHHHHH
Confidence 6 442211111122588888887766543
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0012 Score=56.45 Aligned_cols=41 Identities=24% Similarity=0.319 Sum_probs=34.3
Q ss_pred ccccCCCCceeecCCC-ccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQ 56 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~fl~~~l~~qf~~~~n~~~l~~~~l~ 56 (1096)
+|+++||+|+++..+. ++| +.+++||.++++++++++++++
T Consensus 28 ~r~~~~G~N~l~~~~~~s~~----~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 28 ERRKKYGPNELPEPKKKSLW----RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHSSSSTTTTTSSSHH----HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHhcccccccccccCcHH----HHHHHHHHhHHHHHHHHHHHHC
Confidence 5788999999977664 555 8999999999998888888764
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0092 Score=63.88 Aligned_cols=42 Identities=24% Similarity=0.317 Sum_probs=39.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
.++.+|+++.++.|+++|+++.++||-....+..+....|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999998888875
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.056 Score=68.83 Aligned_cols=163 Identities=18% Similarity=0.191 Sum_probs=87.2
Q ss_pred cCcEEEEEeeccccCCCChHHHHHHH-HHcCCeEEEECCCcHhHHHHHHHHc---CCCCCCCCCeEEEEcCC-------c
Q 001341 592 HDLKVLGVTAIEDRLQDGVPETIETL-RKAGINFWMLTGDKQNTAIQIALSC---NFISPEPKGQLLSIDGK-------T 660 (1096)
Q Consensus 592 ~~l~llG~~~ieD~lr~~v~~~I~~l-~~aGIkv~mlTGD~~~ta~~ia~~~---gl~~~~~~~~~~~~~~~-------~ 660 (1096)
-|.|++-.....-.+.+++.++++.| ++.|+.|+++||+...+....-..+ ++.... |-.+...+. .
T Consensus 603 yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEH--G~~ir~~~~~~w~~~~~ 680 (854)
T PLN02205 603 YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEH--GYFLRLKRDVEWETCVP 680 (854)
T ss_pred cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeC--CEEEEeCCCceeeecch
Confidence 34455433322235667889999997 7889999999999999988776543 333222 212222221 0
Q ss_pred -HHH-HHHHHHHHHHHcc----ccCCCCCcEEEEEcChhHH---------HHHHHHHHHHhhh-hhccceeEEEeeChh-
Q 001341 661 -EDE-VCRSLERVLLTMR----ITTSEPKDVAFVVDGWALE---------IALKHYRKAFTEL-AILSRTAICCRVTPS- 723 (1096)
Q Consensus 661 -~~~-~~~~~~~~~~~~~----~~~~~~~~~~lvi~g~~l~---------~~~~~~~~~f~~l-~~~~~~~i~~r~tP~- 723 (1096)
.+. ....+....+.+. ..--+.+..+++.+-...+ .+...+.+.+... .......-+.++.|.
T Consensus 681 ~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~g 760 (854)
T PLN02205 681 VADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQG 760 (854)
T ss_pred hhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCC
Confidence 011 1112222222221 1112344555654432221 1111122222111 111223345567776
Q ss_pred -hHHHHHHHHHh----cC---CeEEEEcCCccChhhhhhcC
Q 001341 724 -QKAQLVELLKS----CD---YRTLAIGDGGNDVRMIQKAD 756 (1096)
Q Consensus 724 -qK~~iV~~lk~----~~---~~v~~iGDG~ND~~ml~~Ad 756 (1096)
+|+..++.+.+ .| ..++++||+.||.+|++.++
T Consensus 761 vnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 761 VSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred CCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 69999988753 23 47999999999999999885
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.035 Score=55.87 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=31.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHH
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI 636 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~ 636 (1096)
+|.+.+++.+++++++++|++++++||+....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988874
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.0092 Score=64.08 Aligned_cols=41 Identities=12% Similarity=0.215 Sum_probs=35.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCC----cHhHHHHHHHHcCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGD----KQNTAIQIALSCNFI 645 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD----~~~ta~~ia~~~gl~ 645 (1096)
.+.+++++.++.++++|+++.++|++ ...++..+.+..|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 34455999999999999999999998 667899999899983
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.022 Score=62.19 Aligned_cols=114 Identities=13% Similarity=0.124 Sum_probs=77.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.||+.++++.|++.|+++.++|+-....+...-...|+...-+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----------------------------------- 152 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ----------------------------------- 152 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc-----------------------------------
Confidence 578999999999999999999999999999999998898843211
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEee------ChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCee
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 758 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~------tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 758 (1096)
.+++++- .|+-=..+.+.+.-..+.+++|||..+|+.+=++|++-
T Consensus 153 -----------------------------~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~ 203 (248)
T PLN02770 153 -----------------------------AVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMP 203 (248)
T ss_pred -----------------------------EEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCE
Confidence 1111111 11111222333333346799999999999999999986
Q ss_pred E-Eec-CCchHHHHh-hccccccccch
Q 001341 759 V-GIS-GREGLQAAR-AADYSIGKFRF 782 (1096)
Q Consensus 759 I-am~-g~~~~~a~~-~aD~vl~~f~~ 782 (1096)
. ++. |....+... .+|+++.++..
T Consensus 204 ~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 204 VVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred EEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 5 331 322222222 68999887665
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.013 Score=63.83 Aligned_cols=44 Identities=16% Similarity=0.327 Sum_probs=40.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 648 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~ 648 (1096)
+++||+.+.++.|+++|+++.++||-....+..+.++.|+..+.
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 57999999999999999999999999999999999999986544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.014 Score=61.31 Aligned_cols=43 Identities=16% Similarity=0.150 Sum_probs=38.9
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
.+++.++++++++.|+++|+++.++||.....+..+.+..|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4557778899999999999999999999999999999999984
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.017 Score=61.94 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=35.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCc----HhHHHHHHHHcCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDK----QNTAIQIALSCNF 644 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~----~~ta~~ia~~~gl 644 (1096)
-.+.+++++.++.+++.|+++.++||+. ..++..+.+..|+
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 3467889999999999999999999974 5588888888888
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.18 Score=57.22 Aligned_cols=188 Identities=14% Similarity=0.161 Sum_probs=98.6
Q ss_pred cCcEEEEEeeccc--cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEc--C---------
Q 001341 592 HDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSID--G--------- 658 (1096)
Q Consensus 592 ~~l~llG~~~ieD--~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~--~--------- 658 (1096)
-|.+|+-++.-.| .+.+++.++|++|. .|+.++++||+....+.....-.++.--..+|..+... +
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~ 196 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQ 196 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceecccccc
Confidence 4566665554333 47789999999999 78999999999999998873221211001111111100 0
Q ss_pred ----CcHHHHHHHHHHH---HHH----ccccCCCCCcEEEEEcChhH-----HHHHHHHHHHHhhhh--hccceeEEEee
Q 001341 659 ----KTEDEVCRSLERV---LLT----MRITTSEPKDVAFVVDGWAL-----EIALKHYRKAFTELA--ILSRTAICCRV 720 (1096)
Q Consensus 659 ----~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~lvi~g~~l-----~~~~~~~~~~f~~l~--~~~~~~i~~r~ 720 (1096)
....+....++.. +.. ..-..-+.++.++.+.-... ..+...+........ .+....-..++
T Consensus 197 ~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEv 276 (366)
T PLN03017 197 SLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEI 276 (366)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEe
Confidence 0000011111211 111 11122245556665433221 112222222111111 12233445667
Q ss_pred Chh---hHHHHHHHHHhc-------CCeEEEEcCCccChhhhhhc-----CeeEEecCCchHHHHhhccccccccchh
Q 001341 721 TPS---QKAQLVELLKSC-------DYRTLAIGDGGNDVRMIQKA-----DIGVGISGREGLQAARAADYSIGKFRFL 783 (1096)
Q Consensus 721 tP~---qK~~iV~~lk~~-------~~~v~~iGDG~ND~~ml~~A-----dvGIam~g~~~~~a~~~aD~vl~~f~~l 783 (1096)
.|. +|+..|+.+.+. +..++++||...|-.|++.. ++||-+ |... -...|+|.|.+-.-.
T Consensus 277 RP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-G~~~--k~T~A~y~L~dp~eV 351 (366)
T PLN03017 277 RPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILV-SKFP--KDTDASYSLQDPSEV 351 (366)
T ss_pred cCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEE-CCCC--CCCcceEeCCCHHHH
Confidence 763 899999988752 23589999999999999865 355556 4311 113688888764443
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.024 Score=60.65 Aligned_cols=40 Identities=20% Similarity=0.254 Sum_probs=36.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 644 (1096)
++.|++.++++.|+++|++++++|+-....+.......|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 5789999999999999999999999988888877788887
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.042 Score=56.40 Aligned_cols=41 Identities=20% Similarity=0.211 Sum_probs=32.1
Q ss_pred cCcEEEEEeeccc----cCCCChHHHHHHHHHcCCeEEEECCCcH
Q 001341 592 HDLKVLGVTAIED----RLQDGVPETIETLRKAGINFWMLTGDKQ 632 (1096)
Q Consensus 592 ~~l~llG~~~ieD----~lr~~v~~~I~~l~~aGIkv~mlTGD~~ 632 (1096)
+|.++.|-..+.+ ++.|+++++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 5566655544443 3689999999999999999999998753
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.035 Score=66.49 Aligned_cols=120 Identities=14% Similarity=0.123 Sum_probs=77.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.||+.++++.|++.|+++.++|+.....+..+...+|+...-.. ++..+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~--i~~~d~-------------------------- 381 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTE--TFSIEQ-------------------------- 381 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcce--eEecCC--------------------------
Confidence 6889999999999999999999999999999999999888432111 111000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh-cCCeEEEEcCCccChhhhhhcCeeE-Eec
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGV-GIS 762 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~-~~~~v~~iGDG~ND~~ml~~AdvGI-am~ 762 (1096)
+-..-.|+ -+...+++ ..+.+++|||+.+|+.+-+.|++-. ++.
T Consensus 382 -------------------------------v~~~~kP~---~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~ 427 (459)
T PRK06698 382 -------------------------------INSLNKSD---LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCN 427 (459)
T ss_pred -------------------------------CCCCCCcH---HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEe
Confidence 00000111 11222222 2357999999999999999999854 442
Q ss_pred -CCchHHHHhhccccccccchhhhH
Q 001341 763 -GREGLQAARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 763 -g~~~~~a~~~aD~vl~~f~~l~~l 786 (1096)
|....+....+|+++.+++-+..+
T Consensus 428 ~~~~~~~~~~~~d~~i~~l~el~~~ 452 (459)
T PRK06698 428 FDFAQEDELAQADIVIDDLLELKGI 452 (459)
T ss_pred CCCCcccccCCCCEEeCCHHHHHHH
Confidence 211111223589998887666554
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.042 Score=59.00 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=35.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 644 (1096)
++.||+.++++.|+++|+++.++|+-....+...-...|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l 132 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGL 132 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCc
Confidence 6789999999999999999999999888887777677776
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.035 Score=59.39 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=27.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHH
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTA 635 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta 635 (1096)
-++.||+.++|+.|+++|+++.++||-.....
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 35789999999999999999999998766533
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.052 Score=53.93 Aligned_cols=109 Identities=15% Similarity=0.195 Sum_probs=67.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
.++|+-++.++.+++.+|.++++||-...-...+-...+ ..+. +..++- ...+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~iv--gke~---i~~idi----------------------~sn~ 125 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIV--GKER---IYCIDI----------------------VSNN 125 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhc--cccc---eeeeEE----------------------eecC
Confidence 588999999999999999999998876555554444333 1100 000000 0000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEE
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG 760 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIa 760 (1096)
..+-++|. ...++-.-+| .+|...|+.+++..+.+.++|||+.|+++-+.+|+=.|
T Consensus 126 ~~ih~dg~--------------------h~i~~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 126 DYIHIDGQ--------------------HSIKYTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred ceEcCCCc--------------------eeeecCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 00111110 1112212233 36999999999998899999999999988888887554
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.042 Score=57.72 Aligned_cols=41 Identities=12% Similarity=0.222 Sum_probs=37.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
++.|++.++++.|+++|+++.++|+-+...+.......|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 57899999999999999999999999888888888888873
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.1 Score=53.26 Aligned_cols=54 Identities=17% Similarity=0.182 Sum_probs=45.2
Q ss_pred cCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCC-cHhHHHHHHHHcCCC
Q 001341 592 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD-KQNTAIQIALSCNFI 645 (1096)
Q Consensus 592 ~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD-~~~ta~~ia~~~gl~ 645 (1096)
.+.......+-+-++.||+.++++.|+++|+++.++|+- ....+..+....|+.
T Consensus 32 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 32 NNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 344566666667788999999999999999999999976 888888888888874
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.043 Score=61.81 Aligned_cols=44 Identities=16% Similarity=0.128 Sum_probs=40.9
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 602 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 602 ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
..+++.+++.++|+.|++.|++++++||+....+..+...+|+.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 56789999999999999999999999999999999999888874
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.054 Score=60.47 Aligned_cols=38 Identities=18% Similarity=0.248 Sum_probs=32.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 642 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 642 (1096)
++.||+.+.++.|++.|+++.++|+-....+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998887776655544
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.15 Score=52.23 Aligned_cols=157 Identities=22% Similarity=0.268 Sum_probs=83.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCC-cHHHHHHHHHHHHHHccccCCCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK-TEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
++-||+.+|++.|++.=- .+++|---.+-+..+|..+|+-.....+.-+.++.. .+++.. ++.+..+..
T Consensus 83 ~lvPgA~etm~~l~~~~t-p~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR---~E~L~~~~~------ 152 (315)
T COG4030 83 KLVPGAEETMATLQERWT-PVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEER---EELLSIIDV------ 152 (315)
T ss_pred ccCCChHHHHHHHhccCC-ceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHH---HHHHHhcCc------
Confidence 567999999999977544 445555556677888988888433222112223321 112211 122222210
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhh-----hhhccceeEEEeeChhhHHHHHHHHHhc---CCeEEEEcCCccChhhhhhc
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTE-----LAILSRTAICCRVTPSQKAQLVELLKSC---DYRTLAIGDGGNDVRMIQKA 755 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~-----l~~~~~~~i~~r~tP~qK~~iV~~lk~~---~~~v~~iGDG~ND~~ml~~A 755 (1096)
.-.++|+.|-.-+ .+.|.. +..++..+-. +--..|+++++.+-+. ..-.+++||+..|+.|++++
T Consensus 153 --~~~~~geelfe~l---De~F~rLip~E~gki~~~vk~--VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~ 225 (315)
T COG4030 153 --IASLSGEELFEKL---DELFSRLIPSEVGKIVESVKA--VGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAA 225 (315)
T ss_pred --cccccHHHHHHHH---HHHHhhcCHHHHHHHHHhhhh--ccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHh
Confidence 1133454433222 222221 1111111000 0013466666655542 23468899999999999986
Q ss_pred C----eeEEecCCchHHHHhhcccccccc
Q 001341 756 D----IGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 756 d----vGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
. +.|+..||+- +.+.||+.+..-
T Consensus 226 rgrGglAvaFNGNeY--al~eAdVAvisp 252 (315)
T COG4030 226 RGRGGLAVAFNGNEY--ALKEADVAVISP 252 (315)
T ss_pred hccCceEEEecCCcc--cccccceEEecc
Confidence 3 5566667765 777899887643
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.046 Score=63.61 Aligned_cols=40 Identities=10% Similarity=0.165 Sum_probs=34.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHH-HcCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL-SCNF 644 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~-~~gl 644 (1096)
++.+|+.++++.|++.|+++.++|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998887766554 5565
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.075 Score=51.71 Aligned_cols=41 Identities=17% Similarity=0.260 Sum_probs=35.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCc--------HhHHHHHHHHcCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDK--------QNTAIQIALSCNF 644 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~--------~~ta~~ia~~~gl 644 (1096)
-++.+++.++++.|+++|+++.++|+.. ...+..+....|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999988 6667777777776
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.04 Score=56.04 Aligned_cols=44 Identities=16% Similarity=0.209 Sum_probs=40.2
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 602 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 602 ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
-..++.+++.+.++.|+++|++++++|+.....+....+..|+.
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 35678999999999999999999999999999999999999885
|
... |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.12 Score=53.31 Aligned_cols=27 Identities=26% Similarity=0.277 Sum_probs=24.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDK 631 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~ 631 (1096)
.+.||+.++++.|+++|+++.++|+..
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 467999999999999999999999875
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.05 Score=56.29 Aligned_cols=39 Identities=18% Similarity=0.275 Sum_probs=33.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 644 (1096)
-++.||+.++++.|+++|+++.++|+. ..+..+.+..|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l 125 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGL 125 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcCh
Confidence 478999999999999999999999987 556666777777
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.048 Score=56.43 Aligned_cols=39 Identities=15% Similarity=0.285 Sum_probs=31.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 644 (1096)
.++.||+.++|+.|+++|+++.++|+... +....+..|+
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 36789999999999999999999997532 3455666666
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.092 Score=56.29 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=33.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 644 (1096)
++.||+.++++.|+ +|+++.++|+.....+...-...|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 47899999999999 6899999999888877777777776
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.094 Score=54.01 Aligned_cols=40 Identities=20% Similarity=0.292 Sum_probs=33.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
++.|++.++++.|+++|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 688999999999999999999999988777 5555557773
|
HAD subfamilies caused by an overly broad single model. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.05 Score=54.23 Aligned_cols=41 Identities=12% Similarity=-0.006 Sum_probs=36.7
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 644 (1096)
.-+++||+.+.++.|+ .|+++.++|+-....+..+...+++
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 3467999999999998 5799999999999999998888876
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.04 E-value=1.4 Score=45.58 Aligned_cols=37 Identities=11% Similarity=0.182 Sum_probs=32.6
Q ss_pred ChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 609 GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 609 ~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
.+.+.+..|+++|+.|+.+|......-...-+++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4667999999999999999999888888888888875
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.11 Score=55.58 Aligned_cols=40 Identities=18% Similarity=0.317 Sum_probs=36.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
++.|++.++++.|++. +++.++|+-....+..+..+.|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999999888888888888874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.29 Score=55.49 Aligned_cols=219 Identities=13% Similarity=0.148 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHHHHH-H----HhhcCcEEEEEeeccc--cCCCChHHHHHHHHHcCCeEEEECCCcH
Q 001341 560 DEYQEWSLMFKEASSTLIDREWRIAEVC-Q----RLEHDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQ 632 (1096)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~----~~e~~l~llG~~~ieD--~lr~~v~~~I~~l~~aGIkv~mlTGD~~ 632 (1096)
++|..|..++-.|...++. .+.... . .+.-|.+|+-++---| .+.++++++|+.|. ++..|.++||+..
T Consensus 71 ~~~~~w~~~~p~a~~~~~~---~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~ 146 (354)
T PLN02151 71 NKQSCWIKEHPSALNMFEE---ILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCR 146 (354)
T ss_pred hhHHHHHHhCChHHHHHHH---HHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCH
Confidence 4678888777665543221 111100 0 1122344443332223 35677889999998 5679999999999
Q ss_pred hHHHHHHHHcCCCCCCCCCeEEE-E-cC------------CcHHHHHHHHHHHHHHc-------cccCCCCCcEEEEEcC
Q 001341 633 NTAIQIALSCNFISPEPKGQLLS-I-DG------------KTEDEVCRSLERVLLTM-------RITTSEPKDVAFVVDG 691 (1096)
Q Consensus 633 ~ta~~ia~~~gl~~~~~~~~~~~-~-~~------------~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~lvi~g 691 (1096)
........-.++.-....|--+. . .+ ....+....++.....+ .-..-+.+..++.+.-
T Consensus 147 ~~l~~~~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHY 226 (354)
T PLN02151 147 EKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHF 226 (354)
T ss_pred HHHHHHcCCccceEEEeCCceeecCCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEe
Confidence 98877654333211111110010 0 00 00001111112221111 1112244556665433
Q ss_pred hh-----HHHHHHHHHHHHhhhh--hccceeEEEeeChh---hHHHHHHHHHhc-C------CeEEEEcCCccChhhhhh
Q 001341 692 WA-----LEIALKHYRKAFTELA--ILSRTAICCRVTPS---QKAQLVELLKSC-D------YRTLAIGDGGNDVRMIQK 754 (1096)
Q Consensus 692 ~~-----l~~~~~~~~~~f~~l~--~~~~~~i~~r~tP~---qK~~iV~~lk~~-~------~~v~~iGDG~ND~~ml~~ 754 (1096)
.. ...+...+.+...... .+....-..++.|. +|+..|+.+.+. + ..++++||-..|-.|++.
T Consensus 227 R~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~ 306 (354)
T PLN02151 227 RCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKI 306 (354)
T ss_pred CCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHH
Confidence 21 1222222222111111 11223344566664 899999987753 2 248999999999999986
Q ss_pred c-----CeeEEecCCchHHHHhhccccccccchhhh
Q 001341 755 A-----DIGVGISGREGLQAARAADYSIGKFRFLKR 785 (1096)
Q Consensus 755 A-----dvGIam~g~~~~~a~~~aD~vl~~f~~l~~ 785 (1096)
. ++||-+ |... -...|+|.|.+-.-...
T Consensus 307 L~~~~~G~gI~V-g~~~--k~T~A~y~L~dp~eV~~ 339 (354)
T PLN02151 307 LRDKKQGLGILV-SKYA--KETNASYSLQEPDEVME 339 (354)
T ss_pred HhhcCCCccEEe-ccCC--CCCcceEeCCCHHHHHH
Confidence 4 566655 3211 11268888877544433
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.34 Score=53.03 Aligned_cols=43 Identities=7% Similarity=0.218 Sum_probs=33.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHH---HHHHHHcCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTA---IQIALSCNFI 645 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta---~~ia~~~gl~ 645 (1096)
..++-||+.+.++.|++.|+++.++|++..... ....+..|+.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 456789999999999999999999999874433 3444566764
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.2 Score=51.24 Aligned_cols=41 Identities=15% Similarity=0.281 Sum_probs=34.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCc-HhHHHHHHHHcCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDK-QNTAIQIALSCNF 644 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~-~~ta~~ia~~~gl 644 (1096)
.++.++++++++.|++.|+++.++|+.. ...+..+.+.+|+
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3578999999999999999999999987 5666677777765
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.19 Score=52.96 Aligned_cols=39 Identities=8% Similarity=0.133 Sum_probs=31.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 644 (1096)
++-|++.++++.|+++|+++.++|+-... +.......|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 67899999999999999999999986543 4556666666
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.19 Score=48.73 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=33.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCC-cHhHHHHHHHHcC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGD-KQNTAIQIALSCN 643 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD-~~~ta~~ia~~~g 643 (1096)
++.+++.++++.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7776666665555
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=92.91 E-value=2.4 Score=46.19 Aligned_cols=49 Identities=12% Similarity=0.173 Sum_probs=40.1
Q ss_pred EEeeccccCCCChHHHHHHHHHcCCeEEEECC---CcHhHHHHHHHHcCCCC
Q 001341 598 GVTAIEDRLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFIS 646 (1096)
Q Consensus 598 G~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTG---D~~~ta~~ia~~~gl~~ 646 (1096)
|.+--.+.+-+++.++|+.|+++|++++++|| +..+......+++|+-.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44444566677999999999999999999996 77888888888888744
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.46 E-value=0.15 Score=51.54 Aligned_cols=26 Identities=38% Similarity=0.639 Sum_probs=23.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGD 630 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD 630 (1096)
++-|++.++|+.|+++|+++.++|..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46799999999999999999999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.24 Score=49.54 Aligned_cols=40 Identities=15% Similarity=0.305 Sum_probs=33.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHc
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 642 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 642 (1096)
+.+..+|+.+.++.|++.|+++.++|+.....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3445689999999999999999999999988877766554
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=92.35 E-value=0.37 Score=47.90 Aligned_cols=27 Identities=30% Similarity=0.442 Sum_probs=24.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDK 631 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~ 631 (1096)
++.|++.++++.|+++|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999865
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=92.04 E-value=0.49 Score=48.65 Aligned_cols=48 Identities=19% Similarity=0.223 Sum_probs=32.5
Q ss_pred CCeEEEEcCCccChhhhhhcCeeE--Ee-cCCchHHHH-hhccccccccchh
Q 001341 736 DYRTLAIGDGGNDVRMIQKADIGV--GI-SGREGLQAA-RAADYSIGKFRFL 783 (1096)
Q Consensus 736 ~~~v~~iGDG~ND~~ml~~AdvGI--am-~g~~~~~a~-~~aD~vl~~f~~l 783 (1096)
.+.++||||..+|+.+=++|++.. ++ .|....... ..+|+++.++..|
T Consensus 123 ~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 123 MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 467999999999999999999853 43 232211122 2478888765443
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=91.97 E-value=0.58 Score=61.65 Aligned_cols=135 Identities=10% Similarity=0.033 Sum_probs=83.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
.+.||+.+.++.|+++|+++.++|+-....+...-+..|+...--+ .++..+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~--------------------------- 212 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSAD--------------------------- 212 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECc---------------------------
Confidence 4679999999999999999999999999988888888887411000 011000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhH--HHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeE-Ee
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK--AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI 761 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK--~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am 761 (1096)
-+.+.-|... ..+.+.+.-..+.+++|||..+|+.+-++|++-. ++
T Consensus 213 -------------------------------~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v 261 (1057)
T PLN02919 213 -------------------------------AFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAV 261 (1057)
T ss_pred -------------------------------ccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 0001112111 1223333323467999999999999999999844 44
Q ss_pred c-CCchHHHH-hhccccccccchhhhHH-Hhhchhhhhhh
Q 001341 762 S-GREGLQAA-RAADYSIGKFRFLKRLI-LVHGRYSYNRT 798 (1096)
Q Consensus 762 ~-g~~~~~a~-~~aD~vl~~f~~l~~ll-l~~GR~~~~~i 798 (1096)
. +....+.. ..+|+++.++..+.... +.-|-..+.|.
T Consensus 262 ~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~~~ 301 (1057)
T PLN02919 262 TTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSDATPNV 301 (1057)
T ss_pred CCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCCCCCCc
Confidence 2 22222232 26788998877765443 33344444443
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=91.86 E-value=0.73 Score=49.32 Aligned_cols=42 Identities=12% Similarity=0.208 Sum_probs=36.8
Q ss_pred cCCCChHHHHHHH--HHcCCeEEEECCCcHhHHHHHHHHcCCCC
Q 001341 605 RLQDGVPETIETL--RKAGINFWMLTGDKQNTAIQIALSCNFIS 646 (1096)
Q Consensus 605 ~lr~~v~~~I~~l--~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 646 (1096)
|+.|+.++.++.+ ++.|+.+.++|.-+..-...+-+.-|+..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 6789999999999 56899999999999988888888888743
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.47 E-value=0.27 Score=52.49 Aligned_cols=39 Identities=5% Similarity=0.077 Sum_probs=31.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
-++.+|++++++.| ++++.++|+.....+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 35678999999998 5999999999888777777777773
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.07 E-value=2.9 Score=45.52 Aligned_cols=47 Identities=19% Similarity=0.268 Sum_probs=40.4
Q ss_pred EEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHH---cCC
Q 001341 598 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS---CNF 644 (1096)
Q Consensus 598 G~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~---~gl 644 (1096)
|.+--.+.+-|++.++|+.|+++|++++++||+...+...++++ +|+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 55666678899999999999999999999999999888777766 465
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=90.73 E-value=0.78 Score=48.88 Aligned_cols=41 Identities=12% Similarity=0.190 Sum_probs=33.4
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHc
Q 001341 602 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 642 (1096)
Q Consensus 602 ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 642 (1096)
.+-++.+++.++++.|+++|+++.++|.........+....
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 34578999999999999999999999998777665554443
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=89.71 E-value=0.35 Score=51.21 Aligned_cols=28 Identities=25% Similarity=0.351 Sum_probs=25.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQ 632 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~ 632 (1096)
++.|++.++++.|+++|+++.++|+...
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~ 121 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFP 121 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5789999999999999999999998654
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=89.50 E-value=1.3 Score=45.03 Aligned_cols=27 Identities=19% Similarity=0.405 Sum_probs=23.7
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCcH
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDKQ 632 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~~ 632 (1096)
+-||+.++++.|+++|+++.++|....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 449999999999999999999997543
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=88.84 E-value=1.8 Score=46.13 Aligned_cols=31 Identities=13% Similarity=0.203 Sum_probs=27.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhH
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNT 634 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~t 634 (1096)
-|.-+++.+.++.+++.|++|+++|||....
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 3677899999999999999999999998754
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.68 E-value=1.2 Score=50.89 Aligned_cols=27 Identities=30% Similarity=0.410 Sum_probs=24.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGD 630 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD 630 (1096)
-++.|++.++++.|+++|+++.++|+-
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 367899999999999999999999983
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.57 E-value=2.3 Score=44.09 Aligned_cols=40 Identities=13% Similarity=0.179 Sum_probs=32.6
Q ss_pred cCCCChHHHHHHHHHcCC-eEEEECCCcHhHHHHHHHHcCC
Q 001341 605 RLQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIALSCNF 644 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGI-kv~mlTGD~~~ta~~ia~~~gl 644 (1096)
|+-|++.++|+.+++.|- .+.++|--|..-...+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 678999999999999998 8899988877666666666655
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=87.54 E-value=1.2 Score=48.45 Aligned_cols=48 Identities=13% Similarity=0.171 Sum_probs=37.6
Q ss_pred EEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHH--HHHHHcCCC
Q 001341 598 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI--QIALSCNFI 645 (1096)
Q Consensus 598 G~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~--~ia~~~gl~ 645 (1096)
|.+.-.+.+-|+++++++.|+++|+++.++|+-....+. ....++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555556788999999999999999999999986554433 456777874
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.16 E-value=0.95 Score=47.48 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=26.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNT 634 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~t 634 (1096)
++.|++.++++.|+++|+++.++|+-....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 478999999999999999999999876544
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=86.99 E-value=0.95 Score=51.46 Aligned_cols=37 Identities=22% Similarity=0.340 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 641 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 641 (1096)
++.+++.++|+.|+++|+++.++|.-....|..+...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 4568999999999999999999999999988887776
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=86.91 E-value=2.3 Score=45.95 Aligned_cols=175 Identities=14% Similarity=0.111 Sum_probs=69.0
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCC---------cHHHHHHHHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK---------TEDEVCRSLERVLLT 674 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aG-Ikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 674 (1096)
.+.+++.+++++|.+.. ..|+++||+..........--++.--...|..+...+. ...+....+...++.
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 98 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNLPADEDLEWKDEVREILEY 98 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-TTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccccccccchHHHHHHHHHHHH
Confidence 45678899999998764 48999999999985554322222100111112222221 011111222222221
Q ss_pred c----cccCCCCCcEEEEEcCh---------hHHHHHHHHHHHHhh---hh-hccceeEEEeeChhhHHHHHHHHHhc-C
Q 001341 675 M----RITTSEPKDVAFVVDGW---------ALEIALKHYRKAFTE---LA-ILSRTAICCRVTPSQKAQLVELLKSC-D 736 (1096)
Q Consensus 675 ~----~~~~~~~~~~~lvi~g~---------~l~~~~~~~~~~f~~---l~-~~~~~~i~~r~tP~qK~~iV~~lk~~-~ 736 (1096)
. .-.--+.+..++...-. ....+.+.+.+.... +. ...+..+=.|..-..|+..|+.+-+. +
T Consensus 99 ~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ll~~~~ 178 (235)
T PF02358_consen 99 FAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRRLLEELP 178 (235)
T ss_dssp HHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHHHHTTS-
T ss_pred HHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHHHHHhcC
Confidence 1 11111233444443221 122222222222211 11 11233333444444699999987653 3
Q ss_pred ------CeEEEEcCCccChhhhhhc------CeeEEecCCchHHHHhhccccccc
Q 001341 737 ------YRTLAIGDGGNDVRMIQKA------DIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 737 ------~~v~~iGDG~ND~~ml~~A------dvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
..++++||...|-.|++.. ++||-+...+......+|+|-+.+
T Consensus 179 ~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 179 FAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp --------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred ccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 3689999999999999874 556666222222222366765544
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.64 E-value=1.8 Score=42.96 Aligned_cols=40 Identities=15% Similarity=0.236 Sum_probs=36.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 644 (1096)
+.-|++++=+..++++|+++.++|.-+...+...+..+|+
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 4567888889999999999999999999999999999998
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.39 E-value=3.8 Score=41.94 Aligned_cols=104 Identities=19% Similarity=0.315 Sum_probs=62.9
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcE
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 685 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (1096)
+.+++.+++.+|+++|.+++|+|.- .|+.... +.+.+.+.....+
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgy-------f~~~~f~~~~~~m----------------- 76 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGY-------FTEADFDKLHNKM----------------- 76 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccC-------ccHHHHHHHHHHH-----------------
Confidence 5799999999999999999999943 3443221 1111111111111
Q ss_pred EEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhh--------HHHHHHHHHhcC---CeEEEEcCCccChhhhhh
Q 001341 686 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--------KAQLVELLKSCD---YRTLAIGDGGNDVRMIQK 754 (1096)
Q Consensus 686 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~q--------K~~iV~~lk~~~---~~v~~iGDG~ND~~ml~~ 754 (1096)
.+.|......-....+|--.|++ .+.+.+++++.+ ....+|||-..|..+-..
T Consensus 77 ----------------~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n 140 (181)
T COG0241 77 ----------------LKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAEN 140 (181)
T ss_pred ----------------HHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHH
Confidence 11111111111234455555553 466777777654 678999999999999888
Q ss_pred cCeeEEe
Q 001341 755 ADIGVGI 761 (1096)
Q Consensus 755 AdvGIam 761 (1096)
|+++ +.
T Consensus 141 ~gi~-~~ 146 (181)
T COG0241 141 AGIK-GV 146 (181)
T ss_pred CCCC-ce
Confidence 8887 44
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=85.79 E-value=2.8 Score=42.35 Aligned_cols=42 Identities=14% Similarity=0.169 Sum_probs=36.0
Q ss_pred cccCCCChHHHHHHHHHcCCe--EEEECCC-------cHhHHHHHHHHcCC
Q 001341 603 EDRLQDGVPETIETLRKAGIN--FWMLTGD-------KQNTAIQIALSCNF 644 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIk--v~mlTGD-------~~~ta~~ia~~~gl 644 (1096)
++.+.++..+.+++|++.+.. |+++|.- ....|..+++.+|+
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 678889999999999999875 9999986 37788888888887
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=85.31 E-value=2.6 Score=43.98 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=26.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 644 (1096)
++.||+.+++++|++.+ +.+++|.-+.......-...++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 47899999999999985 5667776544433333344444
|
2 hypothetical protein; Provisional |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.34 E-value=12 Score=40.81 Aligned_cols=158 Identities=15% Similarity=0.045 Sum_probs=87.3
Q ss_pred EeeccccCCCChHHHHHHHHHc-CCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEE-EEcCCc-----HH-------HH
Q 001341 599 VTAIEDRLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL-SIDGKT-----ED-------EV 664 (1096)
Q Consensus 599 ~~~ieD~lr~~v~~~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~-~~~~~~-----~~-------~~ 664 (1096)
.--....+-++..++++.|... ..-+||+||++.........--|+---...|... ..+|.. .+ ++
T Consensus 34 ~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v 113 (266)
T COG1877 34 PHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEV 113 (266)
T ss_pred cCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHH
Confidence 3344567778889999999877 5579999999999888776533331111111122 233332 11 22
Q ss_pred HHHHHHHHHHccccCCCCCcEEEEEcChhHHH------HHHH--HHHHHhhh-hhccceeEEEeeChhhHHHHHHHHHh-
Q 001341 665 CRSLERVLLTMRITTSEPKDVAFVVDGWALEI------ALKH--YRKAFTEL-AILSRTAICCRVTPSQKAQLVELLKS- 734 (1096)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~------~~~~--~~~~f~~l-~~~~~~~i~~r~tP~qK~~iV~~lk~- 734 (1096)
.+.++.......-+--+.+.+++...-...+. .+.. ......++ ....+.+|-+|-+-..|+.+++.+.+
T Consensus 114 ~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~ 193 (266)
T COG1877 114 AAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDE 193 (266)
T ss_pred HHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhc
Confidence 23333333322212223344444432211111 0000 00001111 12346677788777789999997664
Q ss_pred c---CCeEEEEcCCccChhhhhhcC
Q 001341 735 C---DYRTLAIGDGGNDVRMIQKAD 756 (1096)
Q Consensus 735 ~---~~~v~~iGDG~ND~~ml~~Ad 756 (1096)
. +..+++.||-..|-.|++..+
T Consensus 194 ~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 194 LPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred CCCCCCcceecCCCCccHHHHHhhc
Confidence 3 345889999999999999987
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.75 E-value=7.4 Score=46.82 Aligned_cols=168 Identities=11% Similarity=0.086 Sum_probs=118.0
Q ss_pred CceeecCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHHhhhhHhh
Q 001341 19 ANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKA 98 (1096)
Q Consensus 19 ~N~i~~~k~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~i~~~~~d~~r~~~~~~~ 98 (1096)
-+..+-..||+..+++...|.+|.+..++++.+..++..+........+..|++++++.++--..+.++.++|.+.++..
T Consensus 84 v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Nse 163 (1051)
T KOG0210|consen 84 VRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNSE 163 (1051)
T ss_pred hhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 33444567888899999999999999999999999999888888888888899999999999889999999997754432
Q ss_pred cce----------EEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceE----EE---EecccCCCCC
Q 001341 99 NEK----------EVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVC----YV---ETAALDGETD 161 (1096)
Q Consensus 99 n~~----------~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~----~V---des~LtGEs~ 161 (1096)
+-. +..-+.=|....+.-.+=+|-|.|.|+.-|.- --..+.++..+|+. .+ -+..++-+++
T Consensus 164 ~y~~ltr~~~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~s--g~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~e 241 (1051)
T KOG0210|consen 164 KYTKLTRDGTRREPSSDIKVGDVIIVHKDERVPADMILLRTSDKS--GSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSE 241 (1051)
T ss_pred hheeeccCCcccccccccccccEEEEecCCcCCcceEEEEccCCC--CceEEeccccCCcccceeeccchhhccCCcccc
Confidence 211 12234457778888889999999999976643 23456666555531 11 1455565555
Q ss_pred cEeeeccccccCCCHhhhccceeEEEccCC
Q 001341 162 LKTRLIPAACMGMDFELLHKIKGVIECPGP 191 (1096)
Q Consensus 162 ~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p 191 (1096)
.-.-. -..+....++.++-|++.....
T Consensus 242 l~~i~---v~Ae~P~kdIh~F~Gt~~~~d~ 268 (1051)
T KOG0210|consen 242 LMEIS---VYAEKPQKDIHSFVGTFTITDS 268 (1051)
T ss_pred hheEE---EeccCcchhhHhhEEEEEEecC
Confidence 43321 1223345678888887765443
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=82.33 E-value=3.7 Score=46.41 Aligned_cols=47 Identities=32% Similarity=0.489 Sum_probs=39.0
Q ss_pred EEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHH---HHcCC
Q 001341 598 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA---LSCNF 644 (1096)
Q Consensus 598 G~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia---~~~gl 644 (1096)
|.+--.+.+-++++++|+.|++.|++++++|++...+...++ .++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 555556778899999999999999999999999977776666 45676
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1096 | ||||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-15 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 5e-15 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 5e-15 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 4e-14 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 5e-12 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-11 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 7e-11 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-08 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 1e-05 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 4e-04 |
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1096 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-39 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 3e-04 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 2e-38 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-04 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-32 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 7e-30 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-29 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 4e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 6e-07 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 1e-06 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-06 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-06 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-06 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-06 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-06 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 4e-06 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 7e-06 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 6e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 1e-04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 2e-04 | |
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 2e-04 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 3e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 158 bits (403), Expect = 1e-39
Identities = 100/440 (22%), Positives = 142/440 (32%), Gaps = 94/440 (21%)
Query: 367 VEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVM 426
I +DKTGTLT+NRM + +T + S V+
Sbjct: 380 TSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSG----QTFDQSSETWRALCRVL 435
Query: 427 AVCNTVIPAKSKAGAILYKAQSQD------EEALVHAAAQLHMVLVNKNASILEIKFNGS 480
+CN A K+G + E AL+ + NA +
Sbjct: 436 TLCNR---AAFKSGQDAVPVPKRIVIGDASETALLKFSELTLG-----NAMGYRER---- 483
Query: 481 VLQYEILETLEFTSDRKRMSVVVK--DCHSGNISLLSKGADEAILP----YAHAGQ---- 530
+ + + F S K + D L+ KGA E +L GQ
Sbjct: 484 ---FPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPL 540
Query: 531 ---QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVC 587
F A LG R L + E +Y EA +
Sbjct: 541 DEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNF------------ 588
Query: 588 QRLEHDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645
L G+ ++ D R VP+ + R AGI M+TGD TA IA S I
Sbjct: 589 --PTSGLSFAGLVSMIDPPR--ATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGII 644
Query: 646 SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG--------WALEIA 697
S E + L + A V++G L A
Sbjct: 645 SE-------------GSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEA 691
Query: 698 LKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 757
L+ + + R +P QK +VE + GDG ND ++KADI
Sbjct: 692 LRTH-----------PEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADI 740
Query: 758 GV--GISGREGLQAAR-AAD 774
GV GI+G + AA+ AAD
Sbjct: 741 GVAMGIAGSD---AAKNAAD 757
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 3e-04
Identities = 24/143 (16%), Positives = 54/143 (37%), Gaps = 33/143 (23%)
Query: 37 LWEQFSRFMNQYFLLIA---CLQLWSLITPVNPASTWGPL---IFIFAV---SATKEAWD 87
Q + + + +A CL +++ +T L + + AV + +
Sbjct: 102 FARQLAGGLQ-CLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQ 160
Query: 88 DYNRYLSDKKANEK-----------EVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCD 136
++ K+ + V++ G K I + + VG++V ++ D VP D
Sbjct: 161 EF-------KS-TNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPAD 212
Query: 137 LVLIGTSDPQGVCYVETAALDGE 159
+ ++ V+ ++L GE
Sbjct: 213 IRILQAQG----RKVDNSSLTGE 231
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 2e-38
Identities = 102/442 (23%), Positives = 144/442 (32%), Gaps = 98/442 (22%)
Query: 367 VEYILTDKTGTLTENRMIFRRCCIGG-IFYGNETGDALKDVGLLNAITSGSPDVIRFLTV 425
I +DKTGTLT+NRM I + T + A S +
Sbjct: 375 TSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSG-----AAFDKTSATWSALSRI 429
Query: 426 MAVCN--TVIPAKSKAGAILYKAQSQD--EEALVHAAAQL---HMVLVNKNASILEIKFN 478
A+CN + + D E AL+ + ++N I+EI FN
Sbjct: 430 AALCNRAVFQAGQDNVPILKRSVAG-DASESALLKCIELCCGSVQGMRDRNPKIVEIPFN 488
Query: 479 GSVLQYEILETLEFTSDRKRMSVVVK--DCHSGNISLLSKGADEAILP----YAHAGQ-- 530
S K + + L+ KGA E IL G
Sbjct: 489 ---------------STNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEE 533
Query: 531 -----QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAE 585
F A + LG R L + ED+Y E + +
Sbjct: 534 PLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFP--------- 584
Query: 586 VCQRLEHDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN 643
DL +G+ A+ D R VP+ + R AGI M+TGD TA IA
Sbjct: 585 -----TTDLCFVGLMAMIDPPR--AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG 637
Query: 644 FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG--------WALE 695
IS +E + L + A VV G L+
Sbjct: 638 IISE-------------GNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLD 684
Query: 696 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKA 755
L ++ + R +P QK +VE + GDG ND ++KA
Sbjct: 685 DILHYH-----------TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKA 733
Query: 756 DIGV--GISGREGLQAAR-AAD 774
DIGV GISG + ++ AAD
Sbjct: 734 DIGVAMGISGSD---VSKQAAD 752
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-04
Identities = 23/143 (16%), Positives = 48/143 (33%), Gaps = 33/143 (23%)
Query: 37 LWEQFSRFMNQYFLLIA---CLQLWSLITPVNPASTWGPL---IFIFAV---SATKEAWD 87
Q + L I C + + L + + V + +
Sbjct: 97 FCRQLFGGFS-ILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQ 155
Query: 88 DYNRYLSDKKANEK-----------EVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCD 136
+ K+ + + V++ G K I ++ + G++V ++ D +P D
Sbjct: 156 EA-------KS-SRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPAD 207
Query: 137 LVLIGTSDPQGVCYVETAALDGE 159
L +I C V+ ++L GE
Sbjct: 208 LRIISAHG----CKVDNSSLTGE 226
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 1e-32
Identities = 85/425 (20%), Positives = 140/425 (32%), Gaps = 130/425 (30%)
Query: 358 TAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 417
TAI E++A ++ + +DKTGTLT N++ + + G E L
Sbjct: 315 TAI-EEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLL------------- 360
Query: 418 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQD--EEALVHAAAQLHMVLVNKNASILEI 475
A+ + + ++QD + A+V A
Sbjct: 361 -------FAAMAS--------------RVENQDAIDAAMVGMLADPKEARAG-------- 391
Query: 476 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 535
+ L F KR ++ D SGN +SKGA E IL A A
Sbjct: 392 --------IREVHFLPFNPVDKRTALTYID-GSGNWHRVSKGAPEQILELAKASNDLSKK 442
Query: 536 VEA-VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL 594
V + +++Y++ GLR+L +A + V E +
Sbjct: 443 VLSIIDKYAERGLRSLAVARQVVPEKTKES-------------------------PGAPW 477
Query: 595 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA----LSCNFISPEPK 650
+ +G+ + D + ETI G+N M+TGD+ + + N
Sbjct: 478 EFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 537
Query: 651 GQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 710
V +E+ DG+A
Sbjct: 538 LGTHKDANLASIPVEELIEK------------------ADGFA----------------- 562
Query: 711 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 770
V P K ++V+ L+ + GDG ND ++KADIG+ ++ AA
Sbjct: 563 --------GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVAD--ATDAA 612
Query: 771 R-AAD 774
R A+D
Sbjct: 613 RGASD 617
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 7e-30
Identities = 117/833 (14%), Positives = 237/833 (28%), Gaps = 248/833 (29%)
Query: 234 ACGVAVYTGNETKLGMTRGI---PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVW 290
A V TG+ T +G + +++ + + + I ++++ + +
Sbjct: 256 AFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIV-WVSSFY 314
Query: 291 KDTEARKEFPWYELLV---------IPLRFELLCSIMIPISIKVSLDL-----------V 330
R P ++L +P + +P + ++ + V
Sbjct: 315 -----RSN-PIVQILEFTLAITIIGVP--------VGLPAVVTTTMAVGAAYLAKKKAIV 360
Query: 331 KSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCI 390
+ L +AI E LA VE + +DKTGTLT+N++
Sbjct: 361 QKL------------------------SAI-ESLAGVEILCSDKTGTLTKNKLSLHDPYT 395
Query: 391 GGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQD 450
G + D + L + D I
Sbjct: 396 VA---GVDPEDLMLTACLAASRKKKGIDAI------------------------------ 422
Query: 451 EEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGN 510
++A + + + S+L +Y++L+ F K++ VV+ G
Sbjct: 423 DKAFLKSLKYY-----PRAKSVLS--------KYKVLQFHPFDPVSKKVVAVVES-PQGE 468
Query: 511 ISLLSKGADEAILPYAH-----AGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEW 565
KGA +L + + + V +++ G R+L +A + E
Sbjct: 469 RITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRGEG------ 522
Query: 566 SLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFW 625
++LG+ D + +T+ + G++
Sbjct: 523 ---------------------------SWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIK 555
Query: 626 MLTGDKQNTAIQIALSCNFISPEPKGQLLS---IDGKTEDEVCRSLERVLLTMRITTSEP 682
MLTGD A + + + + L EV +E
Sbjct: 556 MLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEA------------ 603
Query: 683 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAI 742
DG+A V P K +VE+L+ Y
Sbjct: 604 ------ADGFA-------------------------EVFPQHKYNVVEILQQRGYLVAMT 632
Query: 743 GDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRLILVH----------- 790
GDG ND ++KAD G+ + G AAR AAD ++ +
Sbjct: 633 GDGVNDAPSLKKADTGIAVEG--SSDAARSAAD-----------IVFLAPGLGAIIDALK 679
Query: 791 -GRYSYNRTAFLSQYSFYKSLLICFIQIFFSF-ISGLSGTSLFNSVSLMAYNVFYTSIPV 848
R ++R Y++ + I + + N ++ +F +
Sbjct: 680 TSRQIFHRM-----YAYVVYRIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFA-DVAT 733
Query: 849 LVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGR--SLFHAIVAFVISIHVYA 906
L I D + + L + G ++ +
Sbjct: 734 L--AIAYDNAPYSQTPVKW--------NLPKLWGMSVLLGVVLAVG-TWITVTTMYAQGE 782
Query: 907 ---YEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSAI 963
++ ++ L + + N + + W A ++++ + +
Sbjct: 783 NGGIVQNFGNMDEVLFLQISLTENWLIFITRANGP-FWSSIPSWQLSGAIFLVDILATCF 841
Query: 964 PSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQ 1016
G F + I + G+ I+ Y+ N++
Sbjct: 842 TIWG----WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDSVGFDNLMHG 890
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 1e-29
Identities = 89/433 (20%), Positives = 142/433 (32%), Gaps = 99/433 (22%)
Query: 367 VEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDV-------------GLLNAIT 413
I +DKTGTLT N+M + I G+ + +
Sbjct: 346 TSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRS 405
Query: 414 SGSPDVIRFLTVMAVCN-TVIPAKSKAGAILYKAQSQD--EEALVHAAAQLHMVLVNKNA 470
++ T+ A+CN + + G Y+ + E AL ++++
Sbjct: 406 GQFDGLVELATICALCNDSSLDFNETKGV--YEKVG-EATETALTTLVEKMNVFNTEVRN 462
Query: 471 SILEIKFNGSVL----QYEILETLEFTSDRKRMSVVVKD----CHSGNISLLSKGADEAI 522
+ N + TLEF+ DRK MSV + + KGA E +
Sbjct: 463 LSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGV 522
Query: 523 LP---YAHAGQQTR--------TFVEAVEQYS--QLGLRTLCLAWREVEEDEYQEWSLMF 569
+ Y G + ++++ + LR L LA R+
Sbjct: 523 IDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE------- 575
Query: 570 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWML 627
+ + E DL +GV + D R V +I+ R AGI M+
Sbjct: 576 --------EMVLDDSSRFMEYETDLTFVGVVGMLDPPR--KEVMGSIQLCRDAGIRVIMI 625
Query: 628 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 687
TGD + TAI I + + G+ D+ +
Sbjct: 626 TGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDD-----------L----PL------ 664
Query: 688 VVDGWALEIALKHYRKAFTELA-ILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG 746
E R RV PS K+++VE L+S D T GDG
Sbjct: 665 ------------------AEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGV 706
Query: 747 NDVRMIQKADIGV 759
ND ++KA+IG+
Sbjct: 707 NDAPALKKAEIGI 719
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 4e-12
Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 483 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP---YAHAGQQTRTF---- 535
+++ ++ + F +R+RMSVVV + ++ + L+ KGA + IL +
Sbjct: 55 RWQKIDEIPFDFERRRMSVVVAE-NTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIM 113
Query: 536 ----VEAVEQYSQLGLRTLCLAWREVEEDE 561
+ ++ GLR + +A + + E
Sbjct: 114 LRKIKRVTDTLNRQGLRVVAVATKYLPARE 143
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 64.5 bits (156), Expect = 2e-10
Identities = 87/680 (12%), Positives = 208/680 (30%), Gaps = 199/680 (29%)
Query: 99 NEKEVWVVKQGIKKLIQSQDIR--VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAAL 156
+ + V + +D++ +I+ E D +++ G + L
Sbjct: 18 YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEE-----IDHIIMSKDAVSGTLRLFWTLL 72
Query: 157 DGETDLKTRLIPAACMGMDFE-LLHKIKGVIECPGPDKDIRRFDGNLRLL----PPFIDN 211
+ ++ + + + ++++ L+ IK E P R + L F
Sbjct: 73 SKQEEMVQKFVEEV-LRINYKFLMSPIK--TEQRQPSMMTRMYIEQRDRLYNDNQVFAKY 129
Query: 212 DVC----PLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGIPEPKLTAVDAMIDK 267
+V L ++ +L+ LR + V + G+ G + + A+D +
Sbjct: 130 NVSRLQPYLKLRQALLE---LRPAKN---VLID-------GVL-GSGKTWV-ALDVCLSY 174
Query: 268 LTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIPISIKVSL 327
F+I F W L + S P ++ L
Sbjct: 175 KVQCKMDFKI---------------------F-W-------LNLKNCNS---PETV---L 199
Query: 328 DLVKSLYAKFIDWDYEMIDPE-TDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFR 386
++++ L + IDP T H++N + Q + L +++ +
Sbjct: 200 EMLQKLLYQ--------IDPNWTSRSDHSSNIKLRIHSIQ------AELRRLLKSKP-YE 244
Query: 387 RCCIGGIFYGNETGDALKDVGLLNA--------ITSGSPDVIRFLTVMAVCNTVI----- 433
C + + +++ NA +T+ V FL+ + +
Sbjct: 245 NCLL--VL------LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296
Query: 434 ---PAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETL 490
P + K+ +L K + L + + SI+ ++ + L T
Sbjct: 297 TLTPDEVKS--LLLKYLDCRPQDLPREVLTTNPRRL----SII-----AESIR-DGLATW 344
Query: 491 EF--TSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGL- 547
+ + +++ +++ +++L P E + + +L +
Sbjct: 345 DNWKHVNCDKLTTIIESS----LNVLE--------PA-----------EYRKMFDRLSVF 381
Query: 548 --------RTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL----- 594
L L W +V + + ++ K +L++++ + E + +
Sbjct: 382 PPSAHIPTILLSLIWFDVIKSDVMV--VVNKLHKYSLVEKQPK--ESTISI-PSIYLELK 436
Query: 595 -KVLGVTAIEDRLQDGV-------PETIETLRKAGINFWML--------TGDKQNTAIQI 638
K+ A+ + D + + + + ++ +
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV 496
Query: 639 ALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMR-----ITTSEPKDVAFVVDGWA 693
L F+ E K + D T S+ L ++ I ++PK V
Sbjct: 497 FLDFRFL--EQK---IRHDS-TAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNA--- 547
Query: 694 LEIALKHYRKAFTELAILSR 713
+ + E I S+
Sbjct: 548 ----ILDFLPKIEENLICSK 563
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 5e-09
Identities = 101/687 (14%), Positives = 175/687 (25%), Gaps = 245/687 (35%)
Query: 475 IKFNGSVLQY---EILETLE--FTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG 529
+ F QY +IL E F + KD S+LSK + I+ A
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDN-----FDCKDVQDMPKSILSKEEIDHIIMSKDAV 61
Query: 530 QQTRTFV--------EAVEQYSQLGLRT----LCLAWREVEEDEYQEWSLMFKEASSTLI 577
T E V+++ + LR L + E ++ S+M +
Sbjct: 62 SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT----EQRQPSMMTRMYIEQR- 116
Query: 578 DREWRIAEV-----CQRLEHDLKVLGVTAIEDRLQDGVPE----------------TIET 616
DR + +V RL+ + L + P ++
Sbjct: 117 DRLYNDNQVFAKYNVSRLQP------YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170
Query: 617 LRKAGIN-------FWMLTGDK----------QNTAIQIA--------------LSCNFI 645
+ FW+ + Q QI L + I
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 646 SPEPKGQLLSIDGKTE----DEVC--RSLE------RVLLTMRITTSEPKDVAFVVDGWA 693
E + L S + V ++ ++LLT R K V +
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR-----FKQVTDFLSAAT 285
Query: 694 L-EIALKHYRKAFTE---LAILSRTAICCRVT--PSQKAQLVELLKSCDYRTLAIGDGGN 747
I+L H+ T ++L + + CR P + +
Sbjct: 286 TTHISLDHHSMTLTPDEVKSLLLK-YLDCRPQDLPRE---------VLTTNPRRLS---- 331
Query: 748 DVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFY 807
+I A D +
Sbjct: 332 ---II----------------AESIRDGL-------------------ATWDNWKHVNCD 353
Query: 808 KSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIP--VLVSTIDKDLSEGTVMQH 865
K L I+ + + +F+ +S+ + IP +L S I D+ + VM
Sbjct: 354 K--LTTIIESSLNVLEPAEYRKMFDRLSVFPPSA---HIPTILL-SLIWFDVIKSDVM-- 405
Query: 866 PQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIH-VYAYEKSEMEEVSMVALSGCI 924
++ L+ S ISI +Y K ++E AL
Sbjct: 406 -VVVNKLHKYSLVE-----KQPKEST--------ISIPSIYLELKVKLEN--EYAL---- 445
Query: 925 WLQAFVVALETNSFTVFQHLAIWGNLVAFYII-----NWIFSAIPSSGMYTIMFRLCSQP 979
H ++V Y I + Y
Sbjct: 446 ------------------H----RSIVDHYNIPKTFDSDDLIPPYLDQ-Y---------- 472
Query: 980 SYWITMFLIVAAGMGPIVAL---KYFRYTYRASKINILQQAERMGGPILS-LGTIEPQPR 1035
Y + + L + + + KI A G IL+ L ++
Sbjct: 473 FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKP 532
Query: 1036 AIEKDVAPLSITQPRSRSPVYEPLLSD 1062
I + P YE L++
Sbjct: 533 YICDN------------DPKYERLVNA 547
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 3e-06
Identities = 97/757 (12%), Positives = 202/757 (26%), Gaps = 273/757 (36%)
Query: 10 DETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQ-----LWSLITPV 64
E + + + L L E +F+ + L+ L S I
Sbjct: 48 KEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEE------VLRINYKFLMSPIKTE 101
Query: 65 NPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRV-GN 123
+ ++I ++D + + + ++Q + +L ++++ + G
Sbjct: 102 QRQPSMMTRMYIEQRDRL---YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG- 157
Query: 124 IVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIK 183
++G+ G KT + C + +++ K+
Sbjct: 158 ---------------VLGS----G---------------KTWVALDVC--LSYKVQCKMD 181
Query: 184 GVI------ECPGPDKDI-------RRFDGNLRLLPPFIDNDVCPLTI------KNTILQ 224
I C P+ + + D N N L I +L+
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI--KLRIHSIQAELRRLLK 239
Query: 225 S-----CYL-----RNTE-WA-----CGVAVYTGNETKLGMTRGIPEPKLTAVDAMIDKL 268
S C L +N + W C + + T + + D L
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFK------------------QVTDFL 281
Query: 269 TGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELL----CSIMIPISIK 324
+ A I L E + L + R + L + P +
Sbjct: 282 SAA-----TTTHISLDHHSMTLTPDEVKSLL----LKYLDCRPQDLPREVLTTN-PRRLS 331
Query: 325 VSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMI 384
+ + ++ A + +W + D T I L +E E R +
Sbjct: 332 IIAESIRDGLATWDNWKHVNCD--------KLTTIIESSLNVLEP---------AEYRKM 374
Query: 385 FRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILY 444
F R +F P + IP + ++++
Sbjct: 375 FDRL---SVF----------------------PP-----------SAHIP--TILLSLIW 396
Query: 445 KAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVK 504
+ + +V +LH S++E K ++ +
Sbjct: 397 FDVIKSDVMVV--VNKLH------KYSLVE-------------------KQPKESTISIP 429
Query: 505 DCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREV--EEDEY 562
+ + L K +E L H V+ Y+ +T + D+Y
Sbjct: 430 SIY---LELKVKLENEYAL---HR--------SIVDHYNI--PKTFDS-DDLIPPYLDQY 472
Query: 563 QEWSLMF--KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 620
+ K +R + D + L + +R
Sbjct: 473 FYSHIGHHLKNIEHPERMTLFR------MVFLDFRFLE----------------QKIRHD 510
Query: 621 GINFWMLTGDKQNTAIQIALSCNFISP-EPKGQLLSIDGKTEDEVCRSLERVLLTM--RI 677
W +G NT Q+ +I +P + + ++ L + +
Sbjct: 511 STA-WNASGSILNTLQQLKFYKPYICDNDP----------KYERLVNAILDFLPKIEENL 559
Query: 678 TTSEPKDVAFVVDGWALEIALKH-----YRKAFTELA 709
S+ D+ L IAL + +A ++
Sbjct: 560 ICSKYTDL--------LRIALMAEDEAIFEEAHKQVQ 588
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 3e-05
Identities = 91/629 (14%), Positives = 189/629 (30%), Gaps = 182/629 (28%)
Query: 328 DLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR 387
D++ F+D +++ D + D P + +S+ ++++I+ K ++ +F
Sbjct: 20 DILSVFEDAFVD-NFDCKDVQ-DMP----KSILSK--EEIDHIIMSKD-AVSGTLRLF-- 68
Query: 388 CCIGGIF--YGNET-----GDAL-KDVG-LLNAIT----SGSPDVIRFL-TVMAVCNTV- 432
E + L + L++ I S ++ + N
Sbjct: 69 ----WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124
Query: 433 ------IPAKSKAGAI---LYKAQSQDEEALVHAAAQLH-M------VLVNK--NASILE 474
+ + L + + + ++ + + + + ++
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRP--AKNVL-----IDGVLGSGKTWVALDVCLSYKVQ 177
Query: 475 IKFNGSVLQYEILETL-EFTSDRKRMSVVVKDCH--SGNISLLSKGADEAILPYAHAGQQ 531
K + + + + L S + ++ K + N + S + L +
Sbjct: 178 CKMDFKI--FWL--NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233
Query: 532 TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSL----MFKEASSTLI---DR----- 579
R +++ + Y L L V + F + L+ +
Sbjct: 234 LRRLLKS-KPYE----NCL-LVLLNV-------QNAKAWNAFNLSCKILLTTRFKQVTDF 280
Query: 580 -------EWRIAEVCQRLEHD------LKVLGVTAIEDRLQ--DGVPETI----ETLR-- 618
+ L D LK L + + P + E++R
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG 340
Query: 619 KAGINFW-MLTGDKQNTAIQIALSCNFISPE------------PKG-----QLLSI---D 657
A + W + DK T I+ +L N + P P LLS+ D
Sbjct: 341 LATWDNWKHVNCDKLTTIIESSL--NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD 398
Query: 658 GKTED--EVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTA 715
D V L + L + +PK+ + LE+ +K L R+
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEK----QPKESTISIPSIYLELKVK-----LENEYALHRSI 449
Query: 716 ICCRVTPSQKAQLVELLKSCD--YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 773
+ P + +L+ Y IG ++ ++ + R
Sbjct: 450 VDHYNIP-KTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF-----RMVFL----- 498
Query: 774 DYSIGKFRFLKRLILVHGRYSYNRTA----FLSQYSFYKSLLIC--------FIQIFFSF 821
D FRFL++ I H ++N + L Q FYK IC + F
Sbjct: 499 D-----FRFLEQKI-RHDSTAWNASGSILNTLQQLKFYKP-YICDNDPKYERLVNAILDF 551
Query: 822 ISGLSGTSLFNS-------VSLMAYNVFY 843
+ + +L S ++LMA +
Sbjct: 552 LPKI-EENLICSKYTDLLRIALMAEDEAI 579
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 6e-07
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 722 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 759
K Q V KS YR +A GD ND M+ +A G+
Sbjct: 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGI 168
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 50.5 bits (122), Expect = 1e-06
Identities = 9/47 (19%), Positives = 25/47 (53%)
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 639
+ + + I D + + + +E L+ G+ +L+GDK++ +++
Sbjct: 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELS 170
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 1e-06
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 639
D K + + +ED ++ PETI L+++GI MLTGD + TA +A
Sbjct: 542 DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA 588
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 639
+ +V G+ A+ D L++ ++ L++ GI M+TGD +A I+
Sbjct: 445 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 491
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 639
+ +V G+ A+ D L++ ++ L++ GI M+TGD +A I+
Sbjct: 523 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 569
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 2e-06
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 639
+ +V G+ A+ D L++ ++ L++ GI M+TGD +A I+
Sbjct: 151 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 197
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 2e-06
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 639
+ +V GV A+ DR++ E I L+ GI MLTGD + A +A
Sbjct: 132 NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVA 178
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-06
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 725 KAQLVELLKS-CDY-RTLAIGDGGNDVRMIQKADIGVGISGREGLQA-ARAADYSIGKFR 781
K ++++LLK + + + IGDG D+ AD +G G Q A + I F
Sbjct: 158 KGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFV 217
Query: 782 FL 783
L
Sbjct: 218 EL 219
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 7e-06
Identities = 25/190 (13%), Positives = 54/190 (28%), Gaps = 57/190 (30%)
Query: 594 LKVLGVTAIED-----RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 648
LK + + ++ L +G E + L++ +G +
Sbjct: 59 LKNMPLKLAKEVCESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHL--DA 116
Query: 649 PKG-QLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTE 707
L+ + L +T ++ + L ++
Sbjct: 117 AFSNTLIVENDA-------------LNGLVT--GH-----MMFSHSKGEMLLVLQRLL-- 154
Query: 708 LAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 767
++ + TL +GDG ND+ M + A I + + +E L
Sbjct: 155 -----------NISKTN--------------TLVVGDGANDLSMFKHAHIKIAFNAKEVL 189
Query: 768 QAARAADYSI 777
+ A + I
Sbjct: 190 KQ--HATHCI 197
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 738 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 777
T+A+GDG ND+ M +KA + + + L+ AD I
Sbjct: 161 DTVAVGDGANDISMFKKAGLKIAFCAKPILKE--KADICI 198
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 6e-05
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 738 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNR 797
T+A+GDG ND+ M+ A +GV + ++A A ++ +F L ++ + +
Sbjct: 263 NTVAVGDGANDLVMMAAAGLGVAYHAKPKVEA--KAQTAV-RFAGLGGVVCILS-AALVA 318
Query: 798 TAFLS 802
LS
Sbjct: 319 QQKLS 323
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 23/190 (12%), Positives = 48/190 (25%), Gaps = 57/190 (30%)
Query: 594 LKVLGVTAIED-----RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 648
LK + L G+ + ++ G +++G ++
Sbjct: 163 LKGTPKAVLNAVCDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQL--DY 220
Query: 649 PKG-QLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTE 707
+ D LT IT P +++ + L
Sbjct: 221 AFSNTVEIRDNV-------------LTDNIT--LP-----IMNAANKKQTLVDLAARL-- 258
Query: 708 LAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 767
+ +A GDG ND+ M++ A G+ + +
Sbjct: 259 -----------NIATEN--------------IIACGDGANDLPMLEHAGTGIAWKAKPVV 293
Query: 768 QAARAADYSI 777
+ + I
Sbjct: 294 RE--KIHHQI 301
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 725 KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 758
K ++ L + + IGD DV + +D+
Sbjct: 152 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLC 185
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 41.9 bits (97), Expect = 2e-04
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Query: 193 KDIRRFDGNLRLLPPFIDNDVCP-LTIKNTI 222
+ +++ +L+L D P L IK T+
Sbjct: 20 QALKKLQASLKLYAD----DSAPALAIKATM 46
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 3e-04
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 738 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 777
+T+A+GDG ND+ M+ A +G+ + + L+ AD S+
Sbjct: 341 QTVAVGDGANDIDMLAAAGLGIAFNAKPALRE--VADASL 378
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1096 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.82 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.86 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.86 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.83 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.81 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.72 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.65 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.14 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.12 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.08 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.05 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.04 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.03 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.95 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.84 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.82 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.8 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.8 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.79 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.76 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.75 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.75 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.73 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.71 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.71 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.71 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.69 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.69 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.61 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.59 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.58 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.56 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.55 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.5 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.48 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.45 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.41 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.41 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.41 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.32 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.3 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.29 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.29 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.29 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.26 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.23 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.22 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.21 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.19 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.18 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.17 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.16 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.15 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.12 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 98.09 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.06 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.04 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.02 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.0 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.0 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.0 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 97.99 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.98 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.95 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.92 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.91 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 97.91 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.91 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.86 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.83 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.83 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.82 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.81 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.81 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.79 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.76 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.71 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.7 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.7 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.68 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.68 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.68 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.67 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.66 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.62 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.6 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.59 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.58 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.54 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.52 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.52 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.51 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.48 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.43 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.39 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.37 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.36 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.32 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.32 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.32 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.31 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.29 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.27 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.25 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.22 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.15 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.11 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.05 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.93 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.8 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.76 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.74 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.65 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.61 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.51 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.5 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.37 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.36 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.21 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.11 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.07 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.82 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.81 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 95.8 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.57 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 95.38 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.32 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 95.26 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.25 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.21 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.15 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.09 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.47 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 93.84 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 93.74 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 93.45 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 91.68 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 89.9 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 89.7 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 88.45 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 88.22 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 87.88 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 84.93 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 82.26 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-108 Score=1060.64 Aligned_cols=874 Identities=19% Similarity=0.189 Sum_probs=663.1
Q ss_pred ccccCCCCceeecCCC-ccchhhhHHHHHHHHHHHHHHHHHHHHHHhhcccc--------ccCccchhhHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT--------PVNPASTWGPLIFIFAVSAT 82 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~--------~~~~~~~~~~l~~i~~i~~i 82 (1096)
+|+++||+|+++.++. ++| +.+++||.++++++++++++++++.... ..+.+...++++++++++++
T Consensus 80 ~rl~~~G~N~l~~~~~~~~~----~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 155 (1034)
T 3ixz_A 80 ELLLRDGPNALRPPRGTPEY----VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGC 155 (1034)
T ss_pred HHHHhhCCCCCCCCCCCCHH----HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHH
Confidence 5889999999998776 555 8899999999998888888887654211 01123334566777788999
Q ss_pred HHHHHHHHHhhhh---HhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCC
Q 001341 83 KEAWDDYNRYLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1096)
Q Consensus 83 ~~~~~d~~r~~~~---~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGE 159 (1096)
.+++|++|+.++. +++.+++++|+|||++++|++++|+|||||.|++||+|||||+|+++++ +.||||+||||
T Consensus 156 ~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LTGE 231 (1034)
T 3ixz_A 156 FGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLTGE 231 (1034)
T ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecccCCC
Confidence 9999999988764 4556789999999999999999999999999999999999999998776 89999999999
Q ss_pred CCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEE
Q 001341 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (1096)
Q Consensus 160 s~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv 239 (1096)
|.|+.|.+.. ....|++.+|++|+||.+.+| .+.|+|+
T Consensus 232 S~pv~K~~~~-----------------------------------------~~~~~~~~~n~~f~GT~v~~G-~~~~vVv 269 (1034)
T 3ixz_A 232 SEPQTRSPEC-----------------------------------------THESPLETRNIAFFSTMCLEG-TAQGLVV 269 (1034)
T ss_pred CCCeeccCCC-----------------------------------------ccccccccccceecceeEEee-cceEEEE
Confidence 9999996421 112245678999999999998 6999999
Q ss_pred EecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhh
Q 001341 240 YTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCS 316 (1096)
Q Consensus 240 ~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 316 (1096)
+||.+|.+|++.+ ..+.+++|+++.+++++..+..+.+++++++++++..+ ..+|...+..++ .+++
T Consensus 270 ~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i---~l~v 339 (1034)
T 3ixz_A 270 NTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI-------GYTFLRAMVFFM---AIVV 339 (1034)
T ss_pred eehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cchHHHHHHHHH---HHHH
Confidence 9999999998754 45677899999999999888877776666655544222 124555554433 4788
Q ss_pred cccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeec
Q 001341 317 IMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG 396 (1096)
Q Consensus 317 ~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~ 396 (1096)
.+||++|+++++++...++. +|.+. ++++|+++++|+||++++||||||||||+|+|+|+++++++..|.
T Consensus 340 ~~iPe~Lp~~vti~la~~~~------rmak~----~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~ 409 (1034)
T 3ixz_A 340 AYVPEGLLATVTVCLSLTAK------RLASK----NCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHS 409 (1034)
T ss_pred heeccccHHHHHHHHHHHHH------HHhhC----CeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCcccc
Confidence 89999999888888877776 45444 489999999999999999999999999999999999999887665
Q ss_pred CCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCc---eeeecCCccHHHHHHHHHhcCeEEeeeCCcEE
Q 001341 397 NETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLHMVLVNKNASIL 473 (1096)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~---~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~ 473 (1096)
.+....... ......++....++.++++||++......++. -....++|+|.|+++++.+.+...
T Consensus 410 ~~~~~~~~~----~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~-------- 477 (1034)
T 3ixz_A 410 ADTTEDQSG----QTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNA-------- 477 (1034)
T ss_pred ccCcccccc----cccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCCh--------
Confidence 332111100 01122344567888999999998765432221 123478999999999998876432
Q ss_pred EEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCC--CCeEEEEecChhhhhhhhhccC-----------CchHHHHHHHH
Q 001341 474 EIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH--SGNISLLSKGADEAILPYAHAG-----------QQTRTFVEAVE 540 (1096)
Q Consensus 474 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~--~~~~~l~~KGa~~~il~~~~~~-----------~~~~~~~~~~~ 540 (1096)
.+.+..|++++.+||+|+||||+++++..+ ++++.+|+|||||.|+++|... +..+.+.+.++
T Consensus 478 ----~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~ 553 (1034)
T 3ixz_A 478 ----MGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYL 553 (1034)
T ss_pred ----HHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHH
Confidence 233567889999999999999998887542 4789999999999999999631 11345788899
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHc
Q 001341 541 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 620 (1096)
Q Consensus 541 ~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~a 620 (1096)
+++.+|+|||++|+|.++++++.++.... .+..+..|+||+|+|+++++||+|++++++|++|+++
T Consensus 554 ~~a~~G~RvLa~A~~~l~~~~~~~~~~~~--------------~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~a 619 (1034)
T 3ixz_A 554 SLGGLGERVLGFCQLYLSEKDYPPGYAFD--------------VEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTA 619 (1034)
T ss_pred HHHhcCcHhheEeEEecChhhcccccccc--------------hhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHc
Confidence 99999999999999999887665432110 0112356899999999999999999999999999999
Q ss_pred CCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHH
Q 001341 621 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH 700 (1096)
Q Consensus 621 GIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~ 700 (1096)
||+|||+|||++.||.++|+++|+..++.. ...+......... ...........+++|..++...++
T Consensus 620 GI~vvmiTGd~~~tA~~ia~~lgi~~~~~~---------~i~~~~~~~~~~~----~~~~~~~~~~~~~~g~~l~~~~~~ 686 (1034)
T 3ixz_A 620 GIRVIMVTGDHPITAKAIAASVGIISEGSE---------TVEDIAARLRVPV----DQVNRKDARACVINGMQLKDMDPS 686 (1034)
T ss_pred CCeEEEEeCCCHHHHHHHHHHcCCCCCCch---------HHHHHHHhhCccc----hhccccccceeEEecHhhhhCCHH
Confidence 999999999999999999999999765421 1111111000000 001122334568888887655332
Q ss_pred HHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcccccccc
Q 001341 701 YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 701 ~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
.+.+....++..+|+|++|+||.++|+.+|+.|+.|+|+|||.||++||++||+||||++++.+.++++||+|+.++
T Consensus 687 ---~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~ 763 (1034)
T 3ixz_A 687 ---ELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDD 763 (1034)
T ss_pred ---HHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccC
Confidence 23333333456799999999999999999999999999999999999999999999993377888888999999999
Q ss_pred chhhhHH-HhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhccCCCCh
Q 001341 781 RFLKRLI-LVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSE 859 (1096)
Q Consensus 781 ~~l~~ll-l~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~d~~~ 859 (1096)
++...+. +.|||++|+|+++++.|.+++|+...++.+++.++.. ..+++++|++|+|++++++|++++++|+ ++
T Consensus 764 ~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~---~~pl~~~qiL~inl~~d~~palal~~e~--~~ 838 (1034)
T 3ixz_A 764 NFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSV---PLPLGCITILFIELCTDIFPSVSLAYEK--AE 838 (1034)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHHHHHHHHHhhcCC--CC
Confidence 9887773 5799999999999999999999998888877776532 3579999999999999999999999985 89
Q ss_pred hhhhcCCccccccc-cCCccCchhHHHHHH-HHHHHHHHHHHHhhhhcc---c------------cc---cc--------
Q 001341 860 GTVMQHPQILFYCQ-AGRLLNPSTFAGWFG-RSLFHAIVAFVISIHVYA---Y------------EK---SE-------- 911 (1096)
Q Consensus 860 ~~~~~~p~~y~~~~-~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~---~------------~~---~~-------- 911 (1096)
+++|++||+ .. .+.+++.+.++..++ .++++++..++..+..+. + .. .+
T Consensus 839 ~~~m~~~Pr---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1034)
T 3ixz_A 839 SDIMHLRPR---NPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQE 915 (1034)
T ss_pred hhhhhCCCC---CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccc
Confidence 999999994 33 567888887765444 466666554444332211 0 00 00
Q ss_pred ---------ceehhhhhhHHHH---HHHHhhhheeecc-hh--HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhh
Q 001341 912 ---------MEEVSMVALSGCI---WLQAFVVALETNS-FT--VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLC 976 (1096)
Q Consensus 912 ---------~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 976 (1096)
..+..+..|++++ +++.++++....+ |. .+.|..+|+++++.+++++++.++|..+ .++++.
T Consensus 916 ~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~---~~f~~~ 992 (1034)
T 3ixz_A 916 WTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMP---NIFNFM 992 (1034)
T ss_pred cchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHH---HHhcCC
Confidence 0012344444444 4445556554332 32 3678888888888888888888888655 345554
Q ss_pred c-CHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Q 001341 977 S-QPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1012 (1096)
Q Consensus 977 ~-~~~~w~~~~l~~~~~l~~~~~~k~~~~~~~p~~~~ 1012 (1096)
+ ++.+|+.++++.++.++...+.|++.|.+.++...
T Consensus 993 ~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~~~~~ 1029 (1034)
T 3ixz_A 993 PIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGSWWD 1029 (1034)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhh
Confidence 3 88899999999999999999999998887665543
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-106 Score=1040.31 Aligned_cols=872 Identities=20% Similarity=0.249 Sum_probs=634.9
Q ss_pred ccccCCCCceeecCCC-ccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccC--ccchh---hHHHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN--PASTW---GPLIFIFAVSATKEA 85 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~--~~~~~---~~l~~i~~i~~i~~~ 85 (1096)
+|+++||+|+++++|+ ++| +.+++||+++++++++++++++++..+.+.+ +...| +.++++++++++.+.
T Consensus 32 ~r~~~~G~N~l~~~~~~~~~----~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~ 107 (995)
T 3ar4_A 32 RHLEKYGHNELPAEEGKSLW----ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGV 107 (995)
T ss_dssp HHHHHHCCSSCCCCCCCCHH----HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCccCCCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHHHH
Confidence 5788999999999765 555 8999999999999999999999886544311 11122 333445566778899
Q ss_pred HHHHHHhhh---hHhhcceEEEEEECCe--EEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCC
Q 001341 86 WDDYNRYLS---DKKANEKEVWVVKQGI--KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGET 160 (1096)
Q Consensus 86 ~~d~~r~~~---~~~~n~~~~~V~r~g~--~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs 160 (1096)
++++|..++ ++++.+.+++|+|||+ .++|+++||+|||||.|++||+|||||+|++.+ .|.|+||||+|||||
T Consensus 108 ~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~--s~~l~VdeS~LTGES 185 (995)
T 3ar4_A 108 WQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIK--STTLRVDQSILTGES 185 (995)
T ss_dssp HHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEC--SSCEEEECHHHHCCC
T ss_pred HHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEe--eceEEEEcccccCCC
Confidence 999986554 4567788999999987 699999999999999999999999999997543 355999999999999
Q ss_pred CcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEE
Q 001341 161 DLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240 (1096)
Q Consensus 161 ~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~ 240 (1096)
.|+.|.+... .+++..+.+.+|++|+||.+.+| +++++|++
T Consensus 186 ~pv~K~~~~~--------------------------------------~~~~~~~~~~~~~v~~GT~v~~G-~~~~~V~~ 226 (995)
T 3ar4_A 186 VSVIKHTEPV--------------------------------------PDPRAVNQDKKNMLFSGTNIAAG-KALGIVAT 226 (995)
T ss_dssp SCEEECCSCC--------------------------------------CCTTCCGGGCTTEECTTCEEEEC-EEEEEEEE
T ss_pred cceecccccc--------------------------------------CCcccCcccccceEecCCEEEcc-eEEEEEEE
Confidence 9999975321 01112234778999999999998 89999999
Q ss_pred ecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhH-hHHHHHHHhh
Q 001341 241 TGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLV-IPLRFELLCS 316 (1096)
Q Consensus 241 tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 316 (1096)
||++|++|++.+ .++.+++|+++.+++++..++.+++++++++++++..+.. .......|...+. .+...+.+++
T Consensus 227 tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ai~l~v 305 (995)
T 3ar4_A 227 TGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN-DPVHGGSWIRGAIYYFKIAVALAV 305 (995)
T ss_dssp CGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGG-SCSSSSCHHHHHHHHHHHHHHHHH
T ss_pred cCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccccchHHHHHHHHHHHHHHHHH
Confidence 999999998754 5677889999999999998888877777766655432111 0001123433222 2223344778
Q ss_pred cccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeec
Q 001341 317 IMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG 396 (1096)
Q Consensus 317 ~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~ 396 (1096)
.+||++|+++++++...... +|.+. ++++|+++++|+||++++||||||||||+|+|+|++++..+..++
T Consensus 306 ~aiP~~Lp~~vt~~la~~~~------~ma~~----~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~ 375 (995)
T 3ar4_A 306 AAIPEGLPAVITTCLALGTR------RMAKK----NAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDG 375 (995)
T ss_dssp HHSCTTHHHHHHHHHHHHHH------HHHHT----TEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEET
T ss_pred HhcCcchHHHHHHHHHHHHH------HhccC----CcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccC
Confidence 89999999888888777665 44433 489999999999999999999999999999999999998654433
Q ss_pred CC--------CccCC-CchhhHH----hhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCe
Q 001341 397 NE--------TGDAL-KDVGLLN----AITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHM 463 (1096)
Q Consensus 397 ~~--------~~~~~-~~~~~~~----~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~ 463 (1096)
.. ++... ...+... .....++.+.+++.++++||++.+..++++......+||+|.||++++++.|+
T Consensus 376 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~ 455 (995)
T 3ar4_A 376 DFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNV 455 (995)
T ss_dssp TEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCT
T ss_pred cccccceeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCC
Confidence 10 00000 0000000 00112345678889999999987654332222234699999999999999886
Q ss_pred EEeeeCCcEEEEEe------CCeeEEEEEEEEeccCCCCceeEEEEEeCCCC----eEEEEecChhhhhhhhhccC----
Q 001341 464 VLVNKNASILEIKF------NGSVLQYEILETLEFTSDRKRMSVVVKDCHSG----NISLLSKGADEAILPYAHAG---- 529 (1096)
Q Consensus 464 ~~~~~~~~~~~~~~------~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~----~~~l~~KGa~~~il~~~~~~---- 529 (1096)
+...... +.... ......|++++++||+|+||||||+++.++++ ++.+|+|||||.|+++|...
T Consensus 456 -~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 533 (995)
T 3ar4_A 456 -FNTEVRN-LSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGT 533 (995)
T ss_dssp -TCCCCTT-SCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETT
T ss_pred -ccccccc-cccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCC
Confidence 2111000 00000 01235689999999999999999999975321 57899999999999999631
Q ss_pred -------CchHHHHHHHHHH--HhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEe
Q 001341 530 -------QQTRTFVEAVEQY--SQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVT 600 (1096)
Q Consensus 530 -------~~~~~~~~~~~~~--a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~ 600 (1096)
...+++.++++++ +++|+|||++|||+++..+. .....+. ..++.+|+|++|+|++
T Consensus 534 ~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~----------~~~~~~~-----~~~~~~e~~l~~lG~~ 598 (995)
T 3ar4_A 534 TRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE----------EMVLDDS-----SRFMEYETDLTFVGVV 598 (995)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG----------GCCTTCG-----GGHHHHTCSEEEEEEE
T ss_pred CcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccc----------ccccccc-----hhhhhhccCcEEEEEE
Confidence 1134678889999 99999999999999864210 0011110 1245789999999999
Q ss_pred eccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCC
Q 001341 601 AIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTS 680 (1096)
Q Consensus 601 ~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1096)
+++|++|++++++|+.|+++||++||+|||+..||.++|+++|+...+.. + +
T Consensus 599 ~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~--i---~----------------------- 650 (995)
T 3ar4_A 599 GMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEE--V---A----------------------- 650 (995)
T ss_dssp EEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCC--C---T-----------------------
T ss_pred eecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCc--c---c-----------------------
Confidence 99999999999999999999999999999999999999999999765321 0 0
Q ss_pred CCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEE
Q 001341 681 EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG 760 (1096)
Q Consensus 681 ~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIa 760 (1096)
..+++|..++.+.++ .+.++ ..+..+|||++|+||+++|+.+|+.|+.|+|+|||.||+|||++||||||
T Consensus 651 -----~~~~~g~~~~~l~~~---~~~~~--~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgia 720 (995)
T 3ar4_A 651 -----DRAYTGREFDDLPLA---EQREA--CRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIA 720 (995)
T ss_dssp -----TTEEEHHHHHTSCHH---HHHHH--HHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEE
T ss_pred -----ceEEEchhhhhCCHH---HHHHH--HhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEE
Confidence 013344443322211 11111 23578999999999999999999999999999999999999999999999
Q ss_pred ecCCchHHHHhhccccccccchhhhH-HHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHH
Q 001341 761 ISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAY 839 (1096)
Q Consensus 761 m~g~~~~~a~~~aD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~ 839 (1096)
| |++.+.++++||+++.++++.... ++.|||++|+|+++++.|.+++|+...++.+++.++.. ..+++++|++|+
T Consensus 721 m-g~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~---~~pl~~~qil~~ 796 (995)
T 3ar4_A 721 M-GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL---PEALIPVQLLWV 796 (995)
T ss_dssp E-TTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCSSCHHHHHHH
T ss_pred e-CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---cchHHHHHHHHH
Confidence 9 644444667999999876664443 36899999999999999999999988777777665422 356899999999
Q ss_pred HhHhhhHhHhhhhccCCCChhhhhcCCccccccccCCccCchhHHHHHHHHHHHHHHHHHHhhhhcc--ccc--------
Q 001341 840 NVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYA--YEK-------- 909 (1096)
Q Consensus 840 n~~~~~lp~~~~~~~~d~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~-------- 909 (1096)
|++++++|++++++|+ +++.+|++||+ .+.+.+++.++++.|++.+++++++.++..++.+. ...
T Consensus 797 nl~~d~~p~l~l~~~~--~~~~~m~~~P~---~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (995)
T 3ar4_A 797 NLVTDGLPATALGFNP--PDLDIMDRPPR---SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQL 871 (995)
T ss_dssp HHTTTHHHHHHHTTCC--CCTTGGGSCCC---CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCG
T ss_pred HHHHHHHHHHhhccCC--CChhHHhCCCC---CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchh
Confidence 9999999999888874 67789999884 55678999999999999999998876543222111 000
Q ss_pred ----------c-------c---ceehhhhhhHHHHHHHH---hhhheeecch---hHHHHHHHHHHHHHHHHHHHHHhhc
Q 001341 910 ----------S-------E---MEEVSMVALSGCIWLQA---FVVALETNSF---TVFQHLAIWGNLVAFYIINWIFSAI 963 (1096)
Q Consensus 910 ----------~-------~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 963 (1096)
. . .....+..|++.++.++ ++++....++ ..+.+..++.++++.+++++++.++
T Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~ 951 (995)
T 3ar4_A 872 THFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYV 951 (995)
T ss_dssp GGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00123444555555544 4455443322 2244555666666666666666677
Q ss_pred CCchhHHHHHHhh-cCHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001341 964 PSSGMYTIMFRLC-SQPSYWITMFLIVAAGMGPIVALKYFRYTY 1006 (1096)
Q Consensus 964 ~~~~~~~~~~~~~-~~~~~w~~~~l~~~~~l~~~~~~k~~~~~~ 1006 (1096)
|..+ .++++. .++.+|+.++++.++.++...+.|++.+.|
T Consensus 952 p~~~---~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 952 DPLP---MIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp THHH---HHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred HHHH---HhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 6543 344443 388899999999999999999999987765
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-107 Score=1045.54 Aligned_cols=870 Identities=20% Similarity=0.227 Sum_probs=645.8
Q ss_pred ccccCCCCceeecCC-CccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccc-c---cc----CccchhhHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLI-T---PV----NPASTWGPLIFIFAVSAT 82 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k-~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~-~---~~----~~~~~~~~l~~i~~i~~i 82 (1096)
+|+++||+|+++.++ .++| +.+++||.++++++++++++++++... . .. +.+...++++++++++++
T Consensus 75 ~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 150 (1028)
T 2zxe_A 75 EILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGC 150 (1028)
T ss_dssp HHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHH
Confidence 478899999999875 4666 789999999999999888888876421 1 00 112233556777888999
Q ss_pred HHHHHHHHHhhhh---HhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCC
Q 001341 83 KEAWDDYNRYLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1096)
Q Consensus 83 ~~~~~d~~r~~~~---~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGE 159 (1096)
.+++|++|+.++. +++.+++++|+|||++++|++++|+|||||.|++||+|||||+|+++++ |+||||+||||
T Consensus 151 ~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LTGE 226 (1028)
T 2zxe_A 151 FSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLTGE 226 (1028)
T ss_dssp HHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccCCC
Confidence 9999999876654 5567889999999999999999999999999999999999999997654 99999999999
Q ss_pred CCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEE
Q 001341 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (1096)
Q Consensus 160 s~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv 239 (1096)
|.|+.|.+.. ....|++..|++|+||.+.+| +++|+|+
T Consensus 227 S~pv~K~~~~-----------------------------------------~~~~~~~~~n~v~~GT~v~~G-~~~~~V~ 264 (1028)
T 2zxe_A 227 SEPQTRSPEF-----------------------------------------SSENPLETRNIAFFSTNCVEG-TARGVVV 264 (1028)
T ss_dssp CSCEECCSSC-----------------------------------------CCSSTTTCSSEECTTCEEEEE-EEEEEEE
T ss_pred CcceecccCC-----------------------------------------CCCCcccccceEEeCceEEcc-eEEEEEE
Confidence 9999996431 011245788999999999998 8999999
Q ss_pred EecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhh
Q 001341 240 YTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCS 316 (1096)
Q Consensus 240 ~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 316 (1096)
+||.+|++|++.+ .++.+++|+++.+++++.+++.+.+++++++++++. |. ..+|...+..+++ +++
T Consensus 265 ~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~-~~------~~~~~~~~~~~i~---llv 334 (1028)
T 2zxe_A 265 YTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL-IL------GYSWLEAVIFLIG---IIV 334 (1028)
T ss_dssp ECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HT------TCCHHHHHHHHHH---HHH
T ss_pred EeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hc------cCcHHHHHHHHHH---HHH
Confidence 9999999998754 567788999999999999988888777776665542 22 1246665544443 677
Q ss_pred cccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeec
Q 001341 317 IMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG 396 (1096)
Q Consensus 317 ~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~ 396 (1096)
.+||++|+++++++...++. +|.+. ++++|+++++|+||++++||||||||||+|+|+|+++++++..|.
T Consensus 335 ~~iP~~Lp~~vti~l~~~~~------~mak~----~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~ 404 (1028)
T 2zxe_A 335 ANVPEGLLATVTVCLTLTAK------RMARK----NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHE 404 (1028)
T ss_dssp HHSCTTHHHHHHHHHHHHHH------HHHTT----TEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEE
T ss_pred HHcCchHHHHHHHHHHHHHH------HHhhC----CceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeee
Confidence 78999999988888888776 44433 489999999999999999999999999999999999999887764
Q ss_pred CCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCc---eeeecCCccHHHHHHHHHhcCeEEeeeCCcEE
Q 001341 397 NETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLHMVLVNKNASIL 473 (1096)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~---~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~ 473 (1096)
....+.... ......++...+++.++++||++..+...++. -.+..+||+|.||++++++.+...
T Consensus 405 ~~~~~~~~~----~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~-------- 472 (1028)
T 2zxe_A 405 ADTTENQSG----AAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSV-------- 472 (1028)
T ss_dssp CCCCTTCCS----CCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCH--------
T ss_pred ccCCCCccc----cccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCH--------
Confidence 321110000 00111234456788899999998765332211 113468999999999998764211
Q ss_pred EEEeCCeeEEEEEEEEeccCCCCceeEEEEEeC--CCCeEEEEecChhhhhhhhhccC-----------CchHHHHHHHH
Q 001341 474 EIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC--HSGNISLLSKGADEAILPYAHAG-----------QQTRTFVEAVE 540 (1096)
Q Consensus 474 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~--~~~~~~l~~KGa~~~il~~~~~~-----------~~~~~~~~~~~ 540 (1096)
.+.+..|++++.+||+|+||||+++++.+ .++++++|+|||||.|+++|... +..+.+.++++
T Consensus 473 ----~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~ 548 (1028)
T 2zxe_A 473 ----QGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYL 548 (1028)
T ss_dssp ----HHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHH
T ss_pred ----HHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHH
Confidence 11234577899999999999999999974 25788999999999999999731 11346788899
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHc
Q 001341 541 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 620 (1096)
Q Consensus 541 ~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~a 620 (1096)
+++++|+|||++|+|+++++++.++. .. +++ ..+..|+|++|+|+++++||+|++++++|++|+++
T Consensus 549 ~~a~~G~RvL~~A~~~l~~~~~~~~~--------~~-~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~a 614 (1028)
T 2zxe_A 549 ELGGLGERVLGFCHFALPEDKYNEGY--------PF-DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSA 614 (1028)
T ss_dssp HHHHTTCEEEEEEEEECCSTTSCTTC--------CC-CTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHT
T ss_pred HHHhcCCEEEEEEEEecCcccccccc--------cc-chh-----hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHc
Confidence 99999999999999999765432210 00 000 01235789999999999999999999999999999
Q ss_pred CCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccc-cCCCCCcEEEEEcChhHHHHHH
Q 001341 621 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRI-TTSEPKDVAFVVDGWALEIALK 699 (1096)
Q Consensus 621 GIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lvi~g~~l~~~~~ 699 (1096)
||++||+|||++.||.++|++|||..++.. ...+..... .... ..........+++|..+....+
T Consensus 615 GI~v~miTGD~~~tA~~ia~~lgi~~~~~~---------~i~~~~~~~-----~~~~~~~~~~~~~~~vi~G~~l~~~~~ 680 (1028)
T 2zxe_A 615 GIKVIMVTGDHPITAKAIAKGVGIISEGNE---------TIEDIAARL-----NIPIGQVNPRDAKACVVHGSDLKDLST 680 (1028)
T ss_dssp TCEEEEECSSCHHHHHHHHHHHTSSCTTCC---------CHHHHHHHT-----TCCGGGSCGGGCCEEEEEHHHHTTCCH
T ss_pred CCEEEEECCCCHHHHHHHHHHcCCCCCCch---------hHHHHHhhc-----CcchhhccccccceEEEEcHHhhhCCH
Confidence 999999999999999999999999765432 111111100 0000 0011122357888887765433
Q ss_pred HHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecC-CchHHHHhhcccccc
Q 001341 700 HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAARAADYSIG 778 (1096)
Q Consensus 700 ~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g-~~~~~a~~~aD~vl~ 778 (1096)
+ .+.++...++..+|||++|+||..+|+.+|+.|+.|+|+|||.||+|||++||||||| | ++.+.++++||+++.
T Consensus 681 ~---~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAm-g~~gtd~ak~aAD~Vl~ 756 (1028)
T 2zxe_A 681 E---VLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GISGSDVSKQAADMILL 756 (1028)
T ss_dssp H---HHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE-SSSCCHHHHHHCSEEET
T ss_pred H---HHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEe-CCccCHHHHHhcCEEec
Confidence 2 2333333345579999999999999999999999999999999999999999999999 6 455556679999998
Q ss_pred ccchhhhH-HHhhchhhhhhhhhhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhccCCC
Q 001341 779 KFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDL 857 (1096)
Q Consensus 779 ~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~d~ 857 (1096)
++++-... .+.|||++|.|+++++.|.+++|+...++.+++.++.. ..+++++|++|+|++++.+|++++++|+
T Consensus 757 ~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~---~~~l~~~qil~inl~~d~~pa~al~~e~-- 831 (1028)
T 2zxe_A 757 DDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNV---PLPLGTVTILCIDLGTDMVPAISLAYEQ-- 831 (1028)
T ss_dssp TCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCC---CCSSCHHHHHHHHTTTTHHHHHHGGGCC--
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---cchhHHHHHHHHHHHHHHHHHHHhccCc--
Confidence 75554333 36999999999999999999999987776666655432 3568999999999999999999989985
Q ss_pred ChhhhhcCCccccccccCCccCchhHHH-HHHHHHHHHHHHHHHhhhhc---cc------------cc---c------cc
Q 001341 858 SEGTVMQHPQILFYCQAGRLLNPSTFAG-WFGRSLFHAIVAFVISIHVY---AY------------EK---S------EM 912 (1096)
Q Consensus 858 ~~~~~~~~p~~y~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~---~~------------~~---~------~~ 912 (1096)
+++.+|++||+ ..+.+.++++++++. |+..+++++++.|+..+..+ .. .. . +.
T Consensus 832 ~~~~~m~~~Pr--~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 909 (1028)
T 2zxe_A 832 AESDIMKRQPR--NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQ 909 (1028)
T ss_dssp CSSCGGGSCCC--CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSC
T ss_pred cchhhhccCCC--CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhcccccccccccccc
Confidence 67889999884 223348899888776 45678999887765543321 11 00 0 00
Q ss_pred -----------eehhhhhhHHHHHHH---Hhhhheeecc-hhH-HHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhh
Q 001341 913 -----------EEVSMVALSGCIWLQ---AFVVALETNS-FTV-FQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLC 976 (1096)
Q Consensus 913 -----------~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 976 (1096)
....+..|+++++.+ .++++....+ |.. +.+..++.++++.+++++++.++|..+ .++++.
T Consensus 910 ~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~---~~f~~~ 986 (1028)
T 2zxe_A 910 QWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTD---VALRMY 986 (1028)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHH---HHTCCC
T ss_pred ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHH---hhhcCC
Confidence 023345555555554 4555544332 211 345667777777777777778888654 344443
Q ss_pred -cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 001341 977 -SQPSYWITMFLIVAAGMGPIVALKYFRYTYRAS 1009 (1096)
Q Consensus 977 -~~~~~w~~~~l~~~~~l~~~~~~k~~~~~~~p~ 1009 (1096)
.++.+|+.++.+.++.++...+.|++.+.+...
T Consensus 987 ~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~~~ 1020 (1028)
T 2zxe_A 987 PLKPSWWFCAFPYSLIIFLYDEMRRFIIRRSPGG 1020 (1028)
T ss_dssp CCCGGGGGTTHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCcc
Confidence 388999888888888888888889887765333
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-97 Score=927.30 Aligned_cols=762 Identities=16% Similarity=0.200 Sum_probs=547.1
Q ss_pred ccccCCCCceeecCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccCccchhhHHHHHHHHHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~i~~~~~d~~r 91 (1096)
+|+++||+|+++.+++++| +.+++||.+++++++++.++++++.. .+...+.++++++++++.++++++++
T Consensus 95 ~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~g-----~~~~~~~i~~vv~i~~~i~~~qe~~a 165 (920)
T 1mhs_A 95 QRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGLE-----DWVDFGVICGLLLLNAVVGFVQEFQA 165 (920)
T ss_dssp HHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTCS-----CSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999888877 77899999999877777777766532 22333455566778889999999998
Q ss_pred hhhhHhh---cceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeeecc
Q 001341 92 YLSDKKA---NEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIP 168 (1096)
Q Consensus 92 ~~~~~~~---n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~~ 168 (1096)
.++.+++ .+.+++|+|||++++|++++|+|||||.|++||+|||||+|++++ +.+.||||+|||||.|+.|
T Consensus 166 ~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~---~~l~VDES~LTGES~PV~K--- 239 (920)
T 1mhs_A 166 GSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDD---AFLQVDQSALTGESLAVDK--- 239 (920)
T ss_dssp HHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEES---SCCEEBCTTTSSCCCCEEC---
T ss_pred HHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecC---ceeeeeccccCCCCcceEe---
Confidence 8765544 567899999999999999999999999999999999999999654 1279999999999999999
Q ss_pred ccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCccccc
Q 001341 169 AACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLG 248 (1096)
Q Consensus 169 ~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~ 248 (1096)
..+|.+|+||.+.+| .+.++|++||.+|.+|
T Consensus 240 ------------------------------------------------~~gd~v~sGT~v~~G-~~~~~V~~tG~~T~~g 270 (920)
T 1mhs_A 240 ------------------------------------------------HKGDQVFASSAVKRG-EAFVVITATGDNTFVG 270 (920)
T ss_dssp ------------------------------------------------CSSCEECSCBCCSCC-CEEEEEEECSTTCSTT
T ss_pred ------------------------------------------------cCCCeeecCceEecc-eEEEEEEEeCCcCHHH
Confidence 345799999999998 7999999999999999
Q ss_pred ccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcccchHHHH
Q 001341 249 MTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIPISIKV 325 (1096)
Q Consensus 249 ~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v 325 (1096)
++.+ .++.+++++++.++++..+++++++++++++++.+. +. ..+|...+..++ .+++.+||++|++
T Consensus 271 ~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~-~~------~~~~~~~l~~av---~llV~aiP~aLp~ 340 (920)
T 1mhs_A 271 RAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSF-YR------SNPIVQILEFTL---AITIIGVPVGLPA 340 (920)
T ss_dssp TTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-TT------TCCHHHHHHHHH---HHHHHHSCCCHHH
T ss_pred HHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc------CCcHHHHHHHHH---HHHHHhCchhHHH
Confidence 9765 455678999999999998877776666655544321 11 224555554433 3778899999987
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCCccCCCc
Q 001341 326 SLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKD 405 (1096)
Q Consensus 326 tl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~~~~~~~ 405 (1096)
.+.++..++.. +|.+. ++++|+++++|+||++++||||||||||+|+|+|++++..+. +
T Consensus 341 ~vti~la~g~~------~mak~----~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~---------- 399 (920)
T 1mhs_A 341 VVTTTMAVGAA------YLAKK----KAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-V---------- 399 (920)
T ss_dssp HHHHHHHHHHH------HHHHT----TCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-C----------
T ss_pred HHHHHHHHHHH------HHHhC----CeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-C----------
Confidence 77776666655 34333 488999999999999999999999999999999998754221 0
Q ss_pred hhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEEEE
Q 001341 406 VGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYE 485 (1096)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 485 (1096)
++ .+++.+.++|+... .+ .+||+|.|+++++++.+.. .+....|+
T Consensus 400 ----------~~--~~ll~~a~l~~~~~----~~------~~~P~e~Al~~~~~~~~~~-------------~~~~~~~~ 444 (920)
T 1mhs_A 400 ----------DP--EDLMLTACLAASRK----KK------GIDAIDKAFLKSLKYYPRA-------------KSVLSKYK 444 (920)
T ss_dssp ----------CC--THHHHHHHHSCCCS----SC------SCCSHHHHHHHHHHHSSSC-------------CGGGSCCC
T ss_pred ----------CH--HHHHHHHHHhcCCc----cc------CCChHHHHHHHHHHhcccc-------------hhhccccc
Confidence 00 13456667777532 11 2499999999999876531 11234577
Q ss_pred EEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCc-----hHHHHHHHHHHHhccceEEEEEEEecCHH
Q 001341 486 ILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQ-----TRTFVEAVEQYSQLGLRTLCLAWREVEED 560 (1096)
Q Consensus 486 il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~-----~~~~~~~~~~~a~~GlR~l~~A~k~l~~~ 560 (1096)
+++.+||+|.||||+++++.+ +|+.++|+||||+.|+++|..... .+.+.+++++++.+|+|||++|+|..
T Consensus 445 ~~~~~pF~s~~k~ms~iv~~~-~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~--- 520 (920)
T 1mhs_A 445 VLQFHPFDPVSKKVVAVVESP-QGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG--- 520 (920)
T ss_dssp EEEEEEEETTTTEEEEEECCS-SSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS---
T ss_pred eeEEeeccCCCCeEEEEEEeC-CCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc---
Confidence 889999999999999999865 577889999999999999975321 24577889999999999999998731
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHH
Q 001341 561 EYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL 640 (1096)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~ 640 (1096)
|++++|+|+++++||+||+++++|+.|+++||++||+|||++.||.++|+
T Consensus 521 ------------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~ 570 (920)
T 1mhs_A 521 ------------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSR 570 (920)
T ss_dssp ------------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHH
T ss_pred ------------------------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEee
Q 001341 641 SCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV 720 (1096)
Q Consensus 641 ~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~ 720 (1096)
++||.....+.....++|.. .++++. +.+ ...+..+|+|+
T Consensus 571 ~lGI~~~~~~~~~~~~~g~~---------------------------~~~~~e-----------l~~--~~~~~~V~arv 610 (920)
T 1mhs_A 571 QLGLGTNIYNAERLGLGGGG---------------------------DMPGSE-----------VYD--FVEAADGFAEV 610 (920)
T ss_dssp HHTSSCSCCCSSSSSSCBCC---------------------------CGGGGG-----------GGT--TTTTTSCEESC
T ss_pred HcCCCccccCccceeecCcc---------------------------cCCHHH-----------HHH--HHhhCeEEEEe
Confidence 99996421000000011110 001111 111 12346799999
Q ss_pred ChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccchhhhH-HHhhchhhhhhhh
Q 001341 721 TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTA 799 (1096)
Q Consensus 721 tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l~~l-ll~~GR~~~~~i~ 799 (1096)
+|+||.++|+.+|+.|+.|+|+|||.||+|||++||||||| |+..+.++++||+++.++++-... .+.+||++|+|++
T Consensus 611 ~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAm-g~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~ 689 (920)
T 1mhs_A 611 FPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAV-EGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMY 689 (920)
T ss_dssp CSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEE-TTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCccc-ccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 654444556999999887764444 3689999999999
Q ss_pred hhhhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhccCCCChhhhhcCCccccccccCCccC
Q 001341 800 FLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLN 879 (1096)
Q Consensus 800 ~~i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~d~~~~~~~~~p~~y~~~~~~~~~~ 879 (1096)
+++.|.++.|+.......++.. +.|.+ +++.+++|.|++++. |++++++|+ ++.. +.|..++ .
T Consensus 690 k~i~~~l~~n~~~~~~~~~~~~---~~~~~-l~~~~il~~~l~~d~-~~lal~~e~--~~~~--~~P~~~~---~----- 752 (920)
T 1mhs_A 690 AYVVYRIALSIHLEIFLGLWIA---ILNRS-LNIELVVFIAIFADV-ATLAIAYDN--APYS--QTPVKWN---L----- 752 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---SCSCC-CCHHHHHHHHHHHTT-HHHHCCCCC--SGGG--GSCCCCC---S-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHhcc-CCHHHHHHHHHHHHH-HhhhhcccC--cccc--cCCCCch---H-----
Confidence 9999999998875433222222 33444 688899999988886 888888885 3322 3333221 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhhcccc-cc----cceehhhhhhHHHHHHHHhh---hheeecchhHHHHHHHHHHHH
Q 001341 880 PSTFAGWFGRSLFHAIVAFVISIHVYAYE-KS----EMEEVSMVALSGCIWLQAFV---VALETNSFTVFQHLAIWGNLV 951 (1096)
Q Consensus 880 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 951 (1096)
...++..+..+++.++..++..+..+... .. ......+.+|+..++.+.++ ++.....|..+.++.++++++
T Consensus 753 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~ 832 (920)
T 1mhs_A 753 PKLWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIF 832 (920)
T ss_dssp SSCSSCHHHHHHHHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHH
Confidence 12222233344444443322221111110 00 11134455666666665544 444333333223444555545
Q ss_pred HHHHHHHHHhhcCCchhHHHHHHhh-cCHhHHHHHHHHHHHHHHHHHHHHHH
Q 001341 952 AFYIINWIFSAIPSSGMYTIMFRLC-SQPSYWITMFLIVAAGMGPIVALKYF 1002 (1096)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~~l~~~~~l~~~~~~k~~ 1002 (1096)
+..+++..+.+++. +.+. .++..|+.++++.++.++...+.|++
T Consensus 833 ~~~~~~~~~~~~~~-------f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 877 (920)
T 1mhs_A 833 LVDILATCFTIWGW-------FEHSDTSIVAVVRIWIFSFGIFCIMGGVYYI 877 (920)
T ss_dssp HHHHHHHHHHSSSS-------TTSCSHHHHTHHHHHHHTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhh-------hccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45444444444442 1221 15566766665555555555556643
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-96 Score=917.02 Aligned_cols=645 Identities=18% Similarity=0.210 Sum_probs=487.0
Q ss_pred ccccCCCCceeecCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccccc--cCccchhhHHHHHHHHHHHHHHHHHH
Q 001341 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP--VNPASTWGPLIFIFAVSATKEAWDDY 89 (1096)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~fl~~~l~~qf~~~~n~~~l~~~~l~~~~~~~~--~~~~~~~~~l~~i~~i~~i~~~~~d~ 89 (1096)
+|+++||+|+++.+++++| +.|++||.+|+++++++.++++++..... ...+...+.++++++++++.++++++
T Consensus 40 ~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ 115 (885)
T 3b8c_A 40 DRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEEN 115 (885)
T ss_dssp HHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTT
T ss_pred HHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999888777 56778999999877777777776643211 01222334455556677778899999
Q ss_pred HHhhhhH---hhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeee
Q 001341 90 NRYLSDK---KANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (1096)
Q Consensus 90 ~r~~~~~---~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~ 166 (1096)
|+.++.+ ++.+++++|+|||++++|++++|+|||||.|++||+|||||+|+++++ +.||||+|||||.|+.|.
T Consensus 116 ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv~K~ 191 (885)
T 3b8c_A 116 NAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPVTKH 191 (885)
T ss_dssp TTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCCCBS
T ss_pred HHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcceEec
Confidence 8776544 456788999999999999999999999999999999999999996554 689999999999999993
Q ss_pred ccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCccc
Q 001341 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (1096)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~ 246 (1096)
.+|.+|+||.+.+| ++.++|++||.+|.
T Consensus 192 ---------------------------------------------------~g~~v~~GT~v~~G-~~~~~V~~tG~~T~ 219 (885)
T 3b8c_A 192 ---------------------------------------------------PGQEVFSGSTCKQG-EIEAVVIATGVHTF 219 (885)
T ss_dssp ---------------------------------------------------SCCCCCSCCCCCSC-CCCCBCCSCTTTTT
T ss_pred ---------------------------------------------------CCCccccCeEEeee-EEEEEEEEcCcccH
Confidence 45789999999998 79999999999999
Q ss_pred ccccCCC--CCCCcCHHHHHHHHHHHHHHHHH-HHHHHHHHhhcccccccccccccchHHHhHhHHHHHHHhhcccchHH
Q 001341 247 LGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQ-IVVVIVLGTAGNVWKDTEARKEFPWYELLVIPLRFELLCSIMIPISI 323 (1096)
Q Consensus 247 ~~~~~~~--~~~k~s~l~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L 323 (1096)
+|++.+. ...+++++++.+++++.+++..+ +.+++++++.+ .+. ..+|...+.. ++.+++.+||++|
T Consensus 220 ~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~---~v~llv~aiP~aL 289 (885)
T 3b8c_A 220 FGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMY-PIQ------RRKYRDGIDN---LLVLLIGGIPIAM 289 (885)
T ss_dssp STTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTT-TTT------CSCSTTHHHH---HHHHTTTTCCSST
T ss_pred HHHHHHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHc------cCcHHHHHHH---HHHHHHHHhhhHH
Confidence 9997652 24678999999999987643322 22222222222 111 1234444433 3348899999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCCccCC
Q 001341 324 KVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDAL 403 (1096)
Q Consensus 324 ~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~~~~~ 403 (1096)
++.++++..++.. +|.+. ++++|+++++|+||++++||||||||||+|+|+|.++.+. .+..
T Consensus 290 p~~vti~la~g~~------r~ak~----~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~------ 351 (885)
T 3b8c_A 290 PTVLSVTMAIGSH------RLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCK------ 351 (885)
T ss_dssp TTHHHHTTTHHHH------HHTTT----SCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCS------
T ss_pred HHHHHHHHHHHHH------HHHhC----CeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccCC------
Confidence 7666665555444 45444 4899999999999999999999999999999999743211 0100
Q ss_pred CchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEE
Q 001341 404 KDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQ 483 (1096)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~ 483 (1096)
..+..+++...++|+... .+||.|.|+++++.+.. .....
T Consensus 352 ------------~~~~~~ll~~aa~~~~~~------------~~~p~~~Al~~~~~~~~----------------~~~~~ 391 (885)
T 3b8c_A 352 ------------GVEKDQVLLFAAMASRVE------------NQDAIDAAMVGMLADPK----------------EARAG 391 (885)
T ss_dssp ------------STTHHHHHHHHHHHCCSS------------SCCSHHHHHHHTTCCTT----------------CCCCS
T ss_pred ------------CCCHHHHHHHHHHHhCCC------------CCCchHHHHHHHhhchh----------------hHhhc
Confidence 001234567778887532 47999999999875311 11234
Q ss_pred EEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCC-chHHHHHHHHHHHhccceEEEEEEEecCHHHH
Q 001341 484 YEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ-QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEY 562 (1096)
Q Consensus 484 ~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~-~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~ 562 (1096)
|++++.+||+|.||||+++++.. +|+.++|+||||+.|+++|.... .++++.+++++++++|+||+++|+|++++++.
T Consensus 392 ~~~~~~~pF~s~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~ 470 (885)
T 3b8c_A 392 IREVHFLPFNPVDKRTALTYIDG-SGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTK 470 (885)
T ss_dssp SCCBCCCCCCTTTCCCCCBBCSS-SSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSS
T ss_pred CceeecccCCcccceEEEEEEec-CCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccc
Confidence 56778899999999999999864 57788999999999999997432 34568889999999999999999998865321
Q ss_pred HHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHc
Q 001341 563 QEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 642 (1096)
Q Consensus 563 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 642 (1096)
+..|+|++|+|+++++||+||+++++|+.|+++||+++|+|||+..||.++|+++
T Consensus 471 -------------------------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~l 525 (885)
T 3b8c_A 471 -------------------------ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 525 (885)
T ss_dssp -------------------------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTT
T ss_pred -------------------------cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHh
Confidence 2457899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh
Q 001341 643 NFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP 722 (1096)
Q Consensus 643 gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP 722 (1096)
|+..+..... .+.|.+.++ . +++..++.. ..+..+++|++|
T Consensus 526 Gi~~~~~~~~--~l~g~~~~~-----------------~-------~~~~~l~~~-------------~~~~~v~arv~P 566 (885)
T 3b8c_A 526 GMGTNMYPSS--ALLGTHKDA-----------------N-------LASIPVEEL-------------IEKADGFAGVFP 566 (885)
T ss_dssp TCTTCCSTTS--SCCBGGGGT-----------------T-------SCCSCHHHH-------------HHTSCCEECCCH
T ss_pred CCccccCCcc--eeecccccc-----------------c-------cchhHHHHH-------------HhhCcEEEEECH
Confidence 9964311100 011111110 0 011111111 124578999999
Q ss_pred hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccchhhhH-HHhhchhhhhhhhhh
Q 001341 723 SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFL 801 (1096)
Q Consensus 723 ~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l~~l-ll~~GR~~~~~i~~~ 801 (1096)
+||.++|+.+|+.|+.|+|+|||.||+|||++||||||| |+..+.++++||+++.++++.... .+.+||++|+|+++.
T Consensus 567 ~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAm-g~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~ 645 (885)
T 3b8c_A 567 EHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAV-ADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 645 (885)
T ss_dssp HHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCC-SSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEe-CCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 654444455999999987775544 468999999999999
Q ss_pred hhHhhhhhHHHHHHHHHHHHhhccccchhhhhHHHHHHHhHhhhHhHhhhhccC
Q 001341 802 SQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDK 855 (1096)
Q Consensus 802 i~~~~~kni~~~~~~~~~~~~~~~~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~ 855 (1096)
+.|.+..|+...+..++..+ ++ ..++.+++++|+|++.+..+ +.+.+|+
T Consensus 646 i~~~l~~n~~~~~~~~~~~~--~~--~~~l~p~~il~i~l~~d~~~-l~l~~~~ 694 (885)
T 3b8c_A 646 TIYAVSITIRIVFGFMLIAL--IW--EFDFSAFMVLIIAILNDGTI-MTISKDR 694 (885)
T ss_dssp HHHHHHHTTTTTSTTHHHHS--SC--SSCSCHHHHHHHHHHHHTTT-CCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHH--cc--CcCcCHHHHHHHHHHHHHHH-Hhhcccc
Confidence 99999888753333333222 11 23578999999999999876 6666664
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-68 Score=654.61 Aligned_cols=496 Identities=18% Similarity=0.214 Sum_probs=396.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhh------HhhcceEEEEEE-CCeEEEEeccCCccccEEEeecCCcccccEEEEe
Q 001341 69 TWGPLIFIFAVSATKEAWDDYNRYLSD------KKANEKEVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIG 141 (1096)
Q Consensus 69 ~~~~l~~i~~i~~i~~~~~d~~r~~~~------~~~n~~~~~V~r-~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ 141 (1096)
++-...+++++..+..++|.+.++++. .++.+++++|+| ||++++|++++|+|||+|+|++||+|||||+|+
T Consensus 187 yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl- 265 (736)
T 3rfu_A 187 YFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQ- 265 (736)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEEC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEE-
Confidence 333444555666677888888876643 344678899988 999999999999999999999999999999999
Q ss_pred ccCCCceEEEEecccCCCCCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCe
Q 001341 142 TSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNT 221 (1096)
Q Consensus 142 ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~ 221 (1096)
+|.++||||+|||||.|+.|. .++.
T Consensus 266 ----~G~~~VDES~LTGES~Pv~K~---------------------------------------------------~gd~ 290 (736)
T 3rfu_A 266 ----EGRSFVDESMVTGEPIPVAKE---------------------------------------------------ASAK 290 (736)
T ss_dssp ----SSCEEEECSSSTTCSSCEEEC---------------------------------------------------TTCE
T ss_pred ----ECceEeeecccCCccccEEec---------------------------------------------------cCCc
Confidence 677999999999999999993 4567
Q ss_pred eeecceeecCCeEEEEEEEecCcccccccCC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Q 001341 222 ILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKE 298 (1096)
Q Consensus 222 l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 298 (1096)
+++||.+.+| .+.+.|++||.+|.++++.+ .++.+++++++.+++++.++++++++++++.++++.++.. .
T Consensus 291 v~~Gt~~~~G-~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~-----~ 364 (736)
T 3rfu_A 291 VIGATINQTG-SFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGP-----Q 364 (736)
T ss_dssp ECTTCEEESC-CCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS-----S
T ss_pred CCCceEeccc-eEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----C
Confidence 9999999988 79999999999999988754 4566779999999999999998888888777766543321 1
Q ss_pred cchHHHhHhHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCC
Q 001341 299 FPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTL 378 (1096)
Q Consensus 299 ~~~~~~~~~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTL 378 (1096)
..|...+..++ .+++.++|++|++++.++....... +.+ .++++|+++.+|+||++++|||||||||
T Consensus 365 ~~~~~~l~~ai---~vlviacPcaL~la~p~a~~~~~~~------~a~----~gilvk~~~alE~l~~v~~i~fDKTGTL 431 (736)
T 3rfu_A 365 PALSYGLIAAV---SVLIIACPCALGLATPMSIMVGVGK------GAQ----SGVLIKNAEALERMEKVNTLVVDKTGTL 431 (736)
T ss_dssp SSTTHHHHHHH---HHHHHHCCSTHHHHHHHHHHHHHHH------HHH----TTEEESCHHHHHHHTSCCEEEECCBTTT
T ss_pred chHHHHHHHHH---HhHHHhhhhHHHHHHHHHHHHHHHH------Hhh----cceeechHHHHHHhcCCCEEEEeCCCCC
Confidence 12444444433 3778889999988877777666542 322 3589999999999999999999999999
Q ss_pred CCCceEEEEEEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHH
Q 001341 379 TENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAA 458 (1096)
Q Consensus 379 T~n~m~v~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a 458 (1096)
|+|+|+|.+++.++.. ..+++...+.+. +.++||.+.|+++++
T Consensus 432 T~g~~~v~~i~~~~~~------------------------~~~~l~~aa~le-------------~~s~hPla~Aiv~~a 474 (736)
T 3rfu_A 432 TEGHPKLTRIVTDDFV------------------------EDNALALAAALE-------------HQSEHPLANAIVHAA 474 (736)
T ss_dssp BCSSCEEEEEEESSSC------------------------HHHHHHHHHHHH-------------HSSCCHHHHHHHHHH
T ss_pred cCCceEEEEEEecCCC------------------------HHHHHHHHHHHh-------------hcCCChHHHHHHHHH
Confidence 9999999999733210 011222222111 236799999999999
Q ss_pred HhcCeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCchHHHHHH
Q 001341 459 AQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEA 538 (1096)
Q Consensus 459 ~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~~~~~~~~ 538 (1096)
++.|+.+. ...+|++.+++... ... +|+. +.+|+++.+.+... ....+.+.
T Consensus 475 ~~~~~~~~---------------------~~~~f~~~~g~gv~-~~~--~g~~--~~~G~~~~~~~~~~---~~~~~~~~ 525 (736)
T 3rfu_A 475 KEKGLSLG---------------------SVEAFEAPTGKGVV-GQV--DGHH--VAIGNARLMQEHGG---DNAPLFEK 525 (736)
T ss_dssp HTTCCCCC---------------------CCSCCCCCTTTEEE-ECS--SSSC--EEEESHHHHHHHCC---CCHHHHHH
T ss_pred HhcCCCcc---------------------CcccccccCCceEE-EEE--CCEE--EEEcCHHHHHHcCC---ChhHHHHH
Confidence 98775431 23467777665422 222 3332 45699987765432 23567788
Q ss_pred HHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHH
Q 001341 539 VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLR 618 (1096)
Q Consensus 539 ~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~ 618 (1096)
.++++.+|+|++++| .|.+++|+++++|++|++++++|+.|+
T Consensus 526 ~~~~~~~G~~vl~va--------------------------------------~d~~~~G~i~i~D~i~~~~~~aI~~L~ 567 (736)
T 3rfu_A 526 ADELRGKGASVMFMA--------------------------------------VDGKTVALLVVEDPIKSSTPETILELQ 567 (736)
T ss_dssp HHHHHHTTCEEEEEE--------------------------------------ETTEEEEEEEEECCBCSSHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEeeccchhhHHHHHHHHH
Confidence 999999999999999 467899999999999999999999999
Q ss_pred HcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHH
Q 001341 619 KAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIAL 698 (1096)
Q Consensus 619 ~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~ 698 (1096)
++|++++|+|||+..+|..+|+++|+
T Consensus 568 ~~Gi~v~mlTGd~~~~a~~ia~~lgi------------------------------------------------------ 593 (736)
T 3rfu_A 568 QSGIEIVMLTGDSKRTAEAVAGTLGI------------------------------------------------------ 593 (736)
T ss_dssp HHTCEEEEECSSCHHHHHHHHHHHTC------------------------------------------------------
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcCC------------------------------------------------------
Confidence 99999999999999999999999998
Q ss_pred HHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcccccc
Q 001341 699 KHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG 778 (1096)
Q Consensus 699 ~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~ 778 (1096)
..++++++|++|.++|+.+|+.|+.|+|+|||.||+|||++|||||+| |+..+.++++||+++.
T Consensus 594 ---------------~~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAm-g~g~d~a~~~AD~vl~ 657 (736)
T 3rfu_A 594 ---------------KKVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAM-GTGTDVAIESAGVTLL 657 (736)
T ss_dssp ---------------CCEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEE-SSSCSHHHHHCSEEEC
T ss_pred ---------------CEEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEe-CCccHHHHHhCCEEEc
Confidence 236789999999999999999999999999999999999999999999 7766667789999998
Q ss_pred ccchhhhH-HHhhchhhhhhhhhhhhHhhhhhHHHH
Q 001341 779 KFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLIC 813 (1096)
Q Consensus 779 ~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~kni~~~ 813 (1096)
+.++-... .+.+||.+++|+++.+.|.+..|++..
T Consensus 658 ~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~i 693 (736)
T 3rfu_A 658 HGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGV 693 (736)
T ss_dssp SCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 75554433 368999999999999999999887643
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-67 Score=640.10 Aligned_cols=486 Identities=17% Similarity=0.210 Sum_probs=387.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh------hHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCC
Q 001341 73 LIFIFAVSATKEAWDDYNRYLS------DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQ 146 (1096)
Q Consensus 73 l~~i~~i~~i~~~~~d~~r~~~------~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~ 146 (1096)
.++++++..+.+++|++.++|+ ..++.+++++|+|||++++|+++||+|||+|+|++||+|||||+|+ +
T Consensus 99 ~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl-----~ 173 (645)
T 3j08_A 99 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV-----E 173 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEE-----E
Confidence 3444455567788888887653 4566788999999999999999999999999999999999999999 5
Q ss_pred ceEEEEecccCCCCCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecc
Q 001341 147 GVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSC 226 (1096)
Q Consensus 147 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt 226 (1096)
|.++||||+|||||.|+.| ..++.+++||
T Consensus 174 G~~~VdeS~LTGES~Pv~K---------------------------------------------------~~g~~v~~Gt 202 (645)
T 3j08_A 174 GESYVDESMISGEPVPVLK---------------------------------------------------SKGDEVFGAT 202 (645)
T ss_dssp CCEEEECHHHHCCSSCEEE---------------------------------------------------CTTCEECTTC
T ss_pred CcEEEEcccccCCCCceec---------------------------------------------------CCCCEeeccE
Confidence 7799999999999999999 3467899999
Q ss_pred eeecCCeEEEEEEEecCcccccccC---CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchHH
Q 001341 227 YLRNTEWACGVAVYTGNETKLGMTR---GIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWYE 303 (1096)
Q Consensus 227 ~l~~~~~~~gvVv~tG~~T~~~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 303 (1096)
.+.+| ++.+.|++||.+|.++++. ..++.+++++++.+++++.++++++++++++.++.+.++.. .+|..
T Consensus 203 ~~~~g-~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~------~~~~~ 275 (645)
T 3j08_A 203 INNTG-VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH------APLLF 275 (645)
T ss_dssp EECSS-CEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCS------CSCCC
T ss_pred EEecC-cEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CcHHH
Confidence 99987 7999999999999888764 46677889999999999999888888877777665433321 13333
Q ss_pred HhHhHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCce
Q 001341 304 LLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRM 383 (1096)
Q Consensus 304 ~~~~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m 383 (1096)
.+..++ .+++.++|++|++++.++....... +.+ .++++|+++.+|+||++++||||||||||+|+|
T Consensus 276 ~~~~~i---~vlvia~P~aL~la~p~a~~~~~~~------~a~----~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~ 342 (645)
T 3j08_A 276 AFTTLI---AVLVVACPCAFGLATPTALTVGMGK------GAE----LGILIKNADALEVAEKVTAVIFDKTGTLTKGKP 342 (645)
T ss_dssp TTTTTH---HHHHHHSCTTHHHHHHHHHHHHHHH------HHT----TCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCC
T ss_pred HHHHHH---HHHHHHhhhHHHHHHHHHHHHHHHH------HHH----CCeEecCchHHHHhhCCCEEEEcCcccccCCCe
Confidence 333333 3678889999988888777766553 322 358999999999999999999999999999999
Q ss_pred EEEEEEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCe
Q 001341 384 IFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHM 463 (1096)
Q Consensus 384 ~v~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~ 463 (1096)
+|.+++..+. +..+++...+.|+ ..++||++.|+++++++.|+
T Consensus 343 ~v~~~~~~~~------------------------~~~~~l~~aa~~e-------------~~s~hPla~Aiv~~a~~~g~ 385 (645)
T 3j08_A 343 EVTDLVPLNG------------------------DERELLRLAAIAE-------------RRSEHPIAEAIVKKALEHGI 385 (645)
T ss_dssp EEEEEEESSS------------------------CHHHHHHHHHHHH-------------TTCCSHHHHHHHHHHHHTTC
T ss_pred EEEEEEeCCC------------------------CHHHHHHHHHHHh-------------hcCCChhHHHHHHHHHhcCC
Confidence 9999986531 0123444444443 23679999999999999886
Q ss_pred EEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCchHHHHHHHHHHH
Q 001341 464 VLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYS 543 (1096)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~~~~~~~~~~~~a 543 (1096)
......+ ++ ..+ .+... . ..+.+|+++.+.+... ...+.+.+.+++++
T Consensus 386 ~~~~~~~-------------~~---~~~----g~g~~--~--------~~v~~g~~~~~~~~~~--~~~~~~~~~~~~~~ 433 (645)
T 3j08_A 386 ELGEPEK-------------VE---VIA----GEGVV--A--------DGILVGNKRLMEDFGV--AVSNEVELALEKLE 433 (645)
T ss_dssp CCCSCCC-------------CE---EET----TTEEE--E--------TTEEEECHHHHHHTTC--CCCHHHHHHHHHHH
T ss_pred CcCCccc-------------eE---Eec----CCceE--E--------EEEEECCHHHHHhcCC--CccHHHHHHHHHHH
Confidence 5321110 00 000 01000 0 1155688776654322 22356788899999
Q ss_pred hccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCe
Q 001341 544 QLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGIN 623 (1096)
Q Consensus 544 ~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIk 623 (1096)
.+|+|++++| .|++++|+++++|++||+++++|+.|+++|++
T Consensus 434 ~~g~~~l~va--------------------------------------~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~ 475 (645)
T 3j08_A 434 REAKTAVIVA--------------------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIK 475 (645)
T ss_dssp TTTCCCEEEE--------------------------------------ETTEEEEEEEEECCCTTTHHHHHHHHHHTTCE
T ss_pred hcCCeEEEEE--------------------------------------ECCEEEEEEEecCCchhHHHHHHHHHHHCCCE
Confidence 9999999999 57899999999999999999999999999999
Q ss_pred EEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHH
Q 001341 624 FWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRK 703 (1096)
Q Consensus 624 v~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~ 703 (1096)
++|+|||+..+|..+|+++|+
T Consensus 476 v~~~TGd~~~~a~~ia~~lgi----------------------------------------------------------- 496 (645)
T 3j08_A 476 VGMITGDNWRSAEAISRELNL----------------------------------------------------------- 496 (645)
T ss_dssp EEEECSSCHHHHHHHHHHHTC-----------------------------------------------------------
T ss_pred EEEEeCCCHHHHHHHHHHcCC-----------------------------------------------------------
Confidence 999999999999999999998
Q ss_pred HHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccchh
Q 001341 704 AFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFL 783 (1096)
Q Consensus 704 ~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l 783 (1096)
..++++++|++|.++|+.+++. +.|+|+|||.||+||+++||+||+| |++.+.++++||+++.++++-
T Consensus 497 ----------~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiam-g~g~~~a~~~AD~vl~~~~~~ 564 (645)
T 3j08_A 497 ----------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV-GSGSDVAVESGDIVLIRDDLR 564 (645)
T ss_dssp ----------SEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEE-CCCSCCSSCCSSSEESSCCTT
T ss_pred ----------CEEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEe-CCCcHHHHHhCCEEEecCCHH
Confidence 2578899999999999999988 8999999999999999999999999 666666777999999765553
Q ss_pred hhH-HHhhchhhhhhhhhhhhHhhhhhHHH
Q 001341 784 KRL-ILVHGRYSYNRTAFLSQYSFYKSLLI 812 (1096)
Q Consensus 784 ~~l-ll~~GR~~~~~i~~~i~~~~~kni~~ 812 (1096)
... .+.+||++|+|+++.+.|.+.+|++.
T Consensus 565 ~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~ 594 (645)
T 3j08_A 565 DVVAAIQLSRKTMSKIKQNIFWALIYNVIL 594 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 35789999999999999999999863
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-66 Score=645.62 Aligned_cols=487 Identities=17% Similarity=0.205 Sum_probs=388.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh------hHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCC
Q 001341 72 PLIFIFAVSATKEAWDDYNRYLS------DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDP 145 (1096)
Q Consensus 72 ~l~~i~~i~~i~~~~~d~~r~~~------~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~ 145 (1096)
..++++++..+.+++|++.++++ ..++.+++++|+|||++++|++++|+|||+|+|++||+|||||+|+
T Consensus 176 ~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl----- 250 (723)
T 3j09_A 176 TSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV----- 250 (723)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEE-----
Confidence 34445555667788888887653 3456788999999999999999999999999999999999999999
Q ss_pred CceEEEEecccCCCCCcEeeeccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeec
Q 001341 146 QGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQS 225 (1096)
Q Consensus 146 ~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~G 225 (1096)
+|.++||||+|||||.|+.| ..++.+++|
T Consensus 251 ~G~~~VdeS~LTGES~pv~K---------------------------------------------------~~g~~v~~G 279 (723)
T 3j09_A 251 EGESYVDESMISGEPVPVLK---------------------------------------------------SKGDEVFGA 279 (723)
T ss_dssp ECCEEEECHHHHCCSSCEEE---------------------------------------------------CTTCEECTT
T ss_pred ECCeEEecccccCCCcceee---------------------------------------------------cCCCeeccc
Confidence 57799999999999999999 346789999
Q ss_pred ceeecCCeEEEEEEEecCcccccccC---CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchH
Q 001341 226 CYLRNTEWACGVAVYTGNETKLGMTR---GIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKEFPWY 302 (1096)
Q Consensus 226 t~l~~~~~~~gvVv~tG~~T~~~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 302 (1096)
|.+.+| ++.++|++||.+|.++++. ..++.+++++++.+++++.++++++++++++.++.+.++. ..+|.
T Consensus 280 t~~~~g-~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~------~~~~~ 352 (723)
T 3j09_A 280 TINNTG-VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA------HAPLL 352 (723)
T ss_dssp CEECSS-CEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSST------TCTTC
T ss_pred eEEecC-cEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCcHH
Confidence 999987 7999999999999888764 4667788999999999999998888888777776644332 11333
Q ss_pred HHhHhHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCCCCCCCCccccccccccccccceEEEEecCCCCCCCCc
Q 001341 303 ELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENR 382 (1096)
Q Consensus 303 ~~~~~~~~~~~l~~~~iP~~L~vtl~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~ 382 (1096)
..+..+ +.+++.++|++|++++.++....... +.+ .++++|+++.+|+||++++||||||||||+|+
T Consensus 353 ~~~~~~---i~vlvia~P~aL~la~p~a~~~~~~~------~a~----~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~ 419 (723)
T 3j09_A 353 FAFTTL---IAVLVVACPCAFGLATPTALTVGMGK------GAE----LGILIKNADALEVAEKVTAVIFDKTGTLTKGK 419 (723)
T ss_dssp CSHHHH---HHHHHHHSCTTHHHHHHHHHHHHHHH------HHT----TTCEESSTTHHHHGGGCCEEEEEHHHHTSCSC
T ss_pred HHHHHH---HHHHHhhhhHHHHHHHHHHHHHHHHH------HHH----CCeEEeChHHHHHhhcCCEEEEcCCCccccCc
Confidence 333333 34778899999988888777766553 322 35899999999999999999999999999999
Q ss_pred eEEEEEEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcC
Q 001341 383 MIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLH 462 (1096)
Q Consensus 383 m~v~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g 462 (1096)
|+|.+++..+. +..+++...+.|. ..++||++.|+++++++.|
T Consensus 420 ~~v~~~~~~~~------------------------~~~~~l~~aa~~e-------------~~s~hP~~~Ai~~~a~~~~ 462 (723)
T 3j09_A 420 PEVTDLVPLNG------------------------DERELLRLAAIAE-------------RRSEHPIAEAIVKKALEHG 462 (723)
T ss_dssp CEEEEEEESSS------------------------CHHHHHHHHHHHH-------------TTCCSHHHHHHHHHHHHTT
T ss_pred eEEEEEEeCCC------------------------CHHHHHHHHHHHh-------------ccCCCchhHHHHHHHHhcC
Confidence 99999986531 0123344444432 2367999999999999888
Q ss_pred eEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccCCchHHHHHHHHHH
Q 001341 463 MVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQY 542 (1096)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~~~~~~~~~~~~~~ 542 (1096)
+....... ++ ..+ .+... . ..+.+|+++.+.+... ...+.+.+.++++
T Consensus 463 ~~~~~~~~-------------~~---~~~----g~g~~--~--------~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~ 510 (723)
T 3j09_A 463 IELGEPEK-------------VE---VIA----GEGVV--A--------DGILVGNKRLMEDFGV--AVSNEVELALEKL 510 (723)
T ss_dssp CCCCSCCC-------------CE---EET----TTEEE--E--------TTEEEECHHHHHHTTC--CCCHHHHHHHHHH
T ss_pred CCcCCccc-------------eE---Eec----CCceE--E--------EEEEECCHHHHHhcCC--CccHHHHHHHHHH
Confidence 65321110 00 011 01000 0 1155688776654322 1235688889999
Q ss_pred HhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCCChHHHHHHHHHcCC
Q 001341 543 SQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGI 622 (1096)
Q Consensus 543 a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGI 622 (1096)
+.+|+|++++| .|++++|+++++|++|++++++|+.|+++||
T Consensus 511 ~~~g~~~~~va--------------------------------------~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi 552 (723)
T 3j09_A 511 EREAKTAVIVA--------------------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGI 552 (723)
T ss_dssp HTTTCEEEEEE--------------------------------------ETTEEEEEEEEECCSCTTHHHHHHHHHHTTC
T ss_pred HhcCCeEEEEE--------------------------------------ECCEEEEEEeecCCcchhHHHHHHHHHHCCC
Confidence 99999999999 5789999999999999999999999999999
Q ss_pred eEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChhHHHHHHHHH
Q 001341 623 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYR 702 (1096)
Q Consensus 623 kv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~ 702 (1096)
+++|+|||+..+|..+|+++|+
T Consensus 553 ~v~~~TGd~~~~a~~ia~~lgi---------------------------------------------------------- 574 (723)
T 3j09_A 553 KVGMITGDNWRSAEAISRELNL---------------------------------------------------------- 574 (723)
T ss_dssp EEEEECSSCHHHHHHHHHHHTC----------------------------------------------------------
T ss_pred EEEEECCCCHHHHHHHHHHcCC----------------------------------------------------------
Confidence 9999999999999999999998
Q ss_pred HHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccch
Q 001341 703 KAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 782 (1096)
Q Consensus 703 ~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~ 782 (1096)
..++++++|++|.++|+.+++. +.|+|+|||.||+|||++|||||+| |++.+.++++||+++.+.++
T Consensus 575 -----------~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiam-g~g~~~a~~~AD~vl~~~~~ 641 (723)
T 3j09_A 575 -----------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV-GSGSDVAVESGDIVLIRDDL 641 (723)
T ss_dssp -----------SEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEEC-CCCSCCSSCCSSEECSSCCT
T ss_pred -----------cEEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEe-CCCcHHHHHhCCEEEeCCCH
Confidence 2578899999999999999988 8999999999999999999999999 66666677799999976555
Q ss_pred hhhH-HHhhchhhhhhhhhhhhHhhhhhHHH
Q 001341 783 LKRL-ILVHGRYSYNRTAFLSQYSFYKSLLI 812 (1096)
Q Consensus 783 l~~l-ll~~GR~~~~~i~~~i~~~~~kni~~ 812 (1096)
-... .+.+||++|+|+++.+.|.+++|++.
T Consensus 642 ~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~ 672 (723)
T 3j09_A 642 RDVVAAIQLSRKTMSKIKQNIFWALIYNVIL 672 (723)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333 35799999999999999999999874
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-25 Score=242.47 Aligned_cols=138 Identities=22% Similarity=0.340 Sum_probs=115.8
Q ss_pred cCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHH
Q 001341 592 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERV 671 (1096)
Q Consensus 592 ~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (1096)
.+-.+.|.+.+.|+++|+++++|+.|+++|++++|+|||+..++..+++++|+.
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~-------------------------- 176 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ-------------------------- 176 (263)
Confidence 345688999999999999999999999999999999999999999999999872
Q ss_pred HHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhh
Q 001341 672 LLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRM 751 (1096)
Q Consensus 672 ~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~m 751 (1096)
.++..+.|+.|..+++.++..++.|+|||||.||++|
T Consensus 177 -------------------------------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~a 213 (263)
T 2yj3_A 177 -------------------------------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAA 213 (263)
Confidence 1223445999999999998888899999999999999
Q ss_pred hhhcCeeEEecCCchHHHHhhccccc--cccchhhhHHHhhchhhhhhhhh
Q 001341 752 IQKADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRTAF 800 (1096)
Q Consensus 752 l~~AdvGIam~g~~~~~a~~~aD~vl--~~f~~l~~lll~~GR~~~~~i~~ 800 (1096)
++.||+||++ |+....+...||+++ .++..+..+ +..+|.+++++++
T Consensus 214 a~~Agv~va~-g~~~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 214 LALADVSVAM-GNGVDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
Confidence 9999999999 655444556899999 555555554 4789988888753
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.86 E-value=3.7e-22 Score=186.08 Aligned_cols=102 Identities=21% Similarity=0.282 Sum_probs=94.0
Q ss_pred hhhHhhcceEEEEEECCeEEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeeecccccc
Q 001341 93 LSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACM 172 (1096)
Q Consensus 93 ~~~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~ 172 (1096)
++++++.+.+++|+|+|++++|++++|+|||+|.|++||+|||||+|+ +|.+.||||+|||||.|+.|.
T Consensus 4 ~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~-----~g~~~vdeS~LTGEs~pv~k~------ 72 (113)
T 2hc8_A 4 KKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV-----EGESYVDESMISGEPVPVLKS------ 72 (113)
T ss_dssp HHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----ECCEEEECHHHHCCSSCEEEC------
T ss_pred HHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEE-----EceEEEEccccCCCCccEEEC------
Confidence 456788899999999999999999999999999999999999999999 566999999999999999993
Q ss_pred CCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCcccccccC
Q 001341 173 GMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR 251 (1096)
Q Consensus 173 ~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~ 251 (1096)
.++.+|+||.+.+| .+.++|++||.+|.++++.
T Consensus 73 ---------------------------------------------~g~~v~aGt~~~~G-~~~~~V~~~g~~T~~~~i~ 105 (113)
T 2hc8_A 73 ---------------------------------------------KGDEVFGATINNTG-VLKIRATRVGGETLLAQIV 105 (113)
T ss_dssp ---------------------------------------------TTCEECTTCEECSS-CEEEEEEECGGGSHHHHHH
T ss_pred ---------------------------------------------CCCEEEeCCEEeec-eEEEEEEEecCcCHHHHHH
Confidence 45789999999998 6999999999999998764
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=215.93 Aligned_cols=271 Identities=20% Similarity=0.260 Sum_probs=191.5
Q ss_pred CCCccccccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhh
Q 001341 349 TDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAV 428 (1096)
Q Consensus 349 ~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l 428 (1096)
.+.++++|+++++|+|+++++|+||||||||.+.+.+.++...+. .+ .+++. +
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------~~--------------~~~l~---~ 66 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------DE--------------RELLR---L 66 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----------CH--------------HHHHH---H
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----------CH--------------HHHHH---H
Confidence 345799999999999999999999999999999999988865431 00 12222 2
Q ss_pred hceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCC
Q 001341 429 CNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHS 508 (1096)
Q Consensus 429 c~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~ 508 (1096)
|.++. ..+.+|.+.|+.+++++.|+..... . .+. .++ .+.+..
T Consensus 67 ~~~~e----------~~s~hp~~~a~~~~~~~~g~~~~~~--~-----------~~~---~~~----G~~~~~------- 109 (287)
T 3a1c_A 67 AAIAE----------RRSEHPIAEAIVKKALEHGIELGEP--E-----------KVE---VIA----GEGVVA------- 109 (287)
T ss_dssp HHHHT----------TTCCSHHHHHHHHHHHHTTCCCCCC--S-----------CEE---EET----TTEEEE-------
T ss_pred HHHHh----------hcCCCHHHHHHHHHHHhcCCCcccc--c-----------cce---eec----CCCeEE-------
Confidence 22221 1267999999999999988642110 0 000 000 000000
Q ss_pred CeEEEEecChhhhhhhhhccCCchHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHH
Q 001341 509 GNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ 588 (1096)
Q Consensus 509 ~~~~l~~KGa~~~il~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 588 (1096)
. .+.+|.++.+.+... ..++.+.+..+.+..+|.++++++
T Consensus 110 ~---~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~i~~~----------------------------------- 149 (287)
T 3a1c_A 110 D---GILVGNKRLMEDFGV--AVSNEVELALEKLEREAKTAVIVA----------------------------------- 149 (287)
T ss_dssp T---TEEEECHHHHHHTTC--CCCHHHHHHHHHHHHTTCEEEEEE-----------------------------------
T ss_pred E---EEEECCHHHHHhcCC--CccHHHHHHHHHHHhCCCeEEEEE-----------------------------------
Confidence 0 133455443322111 111345667788889999999988
Q ss_pred HhhcCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHH
Q 001341 589 RLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSL 668 (1096)
Q Consensus 589 ~~e~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~ 668 (1096)
.|..++|.+..+++++|+++++|+.|+++|+++.++||+....+..++..+|+.
T Consensus 150 ---~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~----------------------- 203 (287)
T 3a1c_A 150 ---RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------- 203 (287)
T ss_dssp ---ETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------
T ss_pred ---ECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc-----------------------
Confidence 356789999999999999999999999999999999999999999999999872
Q ss_pred HHHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccC
Q 001341 669 ERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGND 748 (1096)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND 748 (1096)
..|..+.|..|...++.+... +.+++|||+.||
T Consensus 204 ----------------------------------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~D 236 (287)
T 3a1c_A 204 ----------------------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGIND 236 (287)
T ss_dssp ----------------------------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTC
T ss_pred ----------------------------------------------eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHH
Confidence 223345688999999998877 899999999999
Q ss_pred hhhhhhcCeeEEecCCchHHHHhhccccc--cccchhhhHHHhhchhhhhhh
Q 001341 749 VRMIQKADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRT 798 (1096)
Q Consensus 749 ~~ml~~AdvGIam~g~~~~~a~~~aD~vl--~~f~~l~~lll~~GR~~~~~i 798 (1096)
++|.+.|++||++ |+........||+++ .++..+..+ +..+|.+++++
T Consensus 237 i~~a~~ag~~v~~-~~~~~~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i 286 (287)
T 3a1c_A 237 APALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKI 286 (287)
T ss_dssp HHHHHHSSEEEEE-CCCSCCSSCCSSEEESSSCTHHHHHH-HHTTC------
T ss_pred HHHHHHCCeeEEe-CCCCHHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhh
Confidence 9999999999999 554333445789999 555555554 57888888776
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-19 Score=198.76 Aligned_cols=271 Identities=25% Similarity=0.288 Sum_probs=185.6
Q ss_pred cccccccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeec
Q 001341 355 ATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIP 434 (1096)
Q Consensus 355 ~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~ 434 (1096)
+|+++++|.|++++.|+||||||||.|+|+|.++...+. ...+++..++.+.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~------------------------~~~~~~~~~~~~~---- 52 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH------------------------SEDELLQIAASLE---- 52 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS------------------------CHHHHHHHHHHHH----
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC------------------------CHHHHHHHHHHhh----
Confidence 467889999999999999999999999999999865321 1122333333222
Q ss_pred ccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEE
Q 001341 435 AKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLL 514 (1096)
Q Consensus 435 ~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~ 514 (1096)
..+.+|...++.+.++..|..... ... +..++ .+.+...+ ++.. +
T Consensus 53 ---------~~s~~~~~~a~~~~~~~~g~~~~~-------------~~~---~~~~~----g~~~~~~~----~~~~--~ 97 (280)
T 3skx_A 53 ---------ARSEHPIAAAIVEEAEKRGFGLTE-------------VEE---FRAIP----GKGVEGIV----NGRR--Y 97 (280)
T ss_dssp ---------TTCCSHHHHHHHHHHHHTTCCCCC-------------CEE---EEEET----TTEEEEEE----TTEE--E
T ss_pred ---------ccCCCHHHHHHHHHHHhcCCCCCC-------------ccc---eeecC----CCEEEEEE----CCEE--E
Confidence 124578889999999988764311 001 11111 11122222 1222 2
Q ss_pred ecChhhhhhhhhccCCchHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCc
Q 001341 515 SKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL 594 (1096)
Q Consensus 515 ~KGa~~~il~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l 594 (1096)
..|.++.+........ +....+..++.+.+.++ .+.
T Consensus 98 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~--------------------------------------~~~ 133 (280)
T 3skx_A 98 MVVSPGYIRELGIKTD------ESVEKLKQQGKTVVFIL--------------------------------------KNG 133 (280)
T ss_dssp EEECHHHHHHTTCCCC------TTHHHHHTTTCEEEEEE--------------------------------------ETT
T ss_pred EEecHHHHHHcCCCch------HHHHHHHhCCCeEEEEE--------------------------------------ECC
Confidence 2355555443322111 33456778888888777 456
Q ss_pred EEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHH
Q 001341 595 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLT 674 (1096)
Q Consensus 595 ~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (1096)
.++|.+.+.|+++|+++++++.|++.|+++.++||+....+..++..+|+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~----------------------------- 184 (280)
T 3skx_A 134 EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD----------------------------- 184 (280)
T ss_dssp EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh-----------------------------
Confidence 789999999999999999999999999999999999999999999999982
Q ss_pred ccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhh
Q 001341 675 MRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQK 754 (1096)
Q Consensus 675 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~ 754 (1096)
..+..+.|.+|...++.+.+.. .++|+|||.||++|++.
T Consensus 185 ----------------------------------------~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~ 223 (280)
T 3skx_A 185 ----------------------------------------DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQ 223 (280)
T ss_dssp ----------------------------------------EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHH
T ss_pred ----------------------------------------hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHh
Confidence 2344567889999999888765 67999999999999999
Q ss_pred cCeeEEecCCchHHHHhhccccc--cccchhhhHHHhhchhhhhhhhhhhhH
Q 001341 755 ADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRTAFLSQY 804 (1096)
Q Consensus 755 AdvGIam~g~~~~~a~~~aD~vl--~~f~~l~~lll~~GR~~~~~i~~~i~~ 804 (1096)
|++||+| |+....++..||+++ .+...+..+ +..+|..+.+++..+.|
T Consensus 224 Ag~~va~-~~~~~~~~~~a~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~ 273 (280)
T 3skx_A 224 ADVGIAI-GAGTDVAVETADIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAW 273 (280)
T ss_dssp SSEEEEC-SCCSSSCCCSSSEECSSCCTHHHHHH-HHHHHTCCC--------
T ss_pred CCceEEe-cCCcHHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999999 776666777899988 445555554 46788887776554443
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-20 Score=178.26 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=92.3
Q ss_pred hhhHhhcceEEEEEECCe------EEEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeee
Q 001341 93 LSDKKANEKEVWVVKQGI------KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (1096)
Q Consensus 93 ~~~~~~n~~~~~V~r~g~------~~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~ 166 (1096)
+++.++.+.+++|+|+|. ++.|++++|+|||+|.|++||+|||||+|+ +|.+.||||+|||||.|+.|
T Consensus 10 ~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi-----~g~~~vdeS~LTGEs~pv~k- 83 (124)
T 2kij_A 10 AKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVI-----EGHSMVDESLITGEAMPVAK- 83 (124)
T ss_dssp HHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEEC-----SCCCEEECTTTTCCSSCEEC-
T ss_pred HHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEE-----EccEEEEeccccCCCccEEe-
Confidence 356778899999999764 788999999999999999999999999999 56679999999999999999
Q ss_pred ccccccCCCHhhhccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCccc
Q 001341 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (1096)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~ 246 (1096)
..++.+|+||.+.+| .+.+.|++||.+|.
T Consensus 84 --------------------------------------------------~~g~~v~aGt~~~~G-~~~~~v~~~g~~T~ 112 (124)
T 2kij_A 84 --------------------------------------------------KPGSTVIAGSINQNG-SLLICATHVGADTT 112 (124)
T ss_dssp --------------------------------------------------CTTEEECTTCEEESS-CCEEEECSCTTTCH
T ss_pred --------------------------------------------------CCCCEEEcCCEEeee-EEEEEEEEecccCH
Confidence 346789999999998 69999999999999
Q ss_pred ccccCC
Q 001341 247 LGMTRG 252 (1096)
Q Consensus 247 ~~~~~~ 252 (1096)
++++.+
T Consensus 113 ~~~I~~ 118 (124)
T 2kij_A 113 LSQIVK 118 (124)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988643
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-18 Score=175.69 Aligned_cols=138 Identities=21% Similarity=0.254 Sum_probs=104.6
Q ss_pred HHHHHHhhhceeecccCCCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeE
Q 001341 421 RFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMS 500 (1096)
Q Consensus 421 ~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrms 500 (1096)
+.+...++|+.... ..+||+|.|+++++...+. ......|++++.+||+|+|||||
T Consensus 17 ~vl~~a~L~s~~~~----------~~~n~~d~Ail~~~~~~~~--------------~~~~~~~~~~~eiPFds~rKrms 72 (170)
T 3gwi_A 17 RVLHSAWLNSHYQT----------GLKNLLDTAVLEGTDEESA--------------RSLASRWQKIDEIPFDFERRRMS 72 (170)
T ss_dssp HHHHHHHHHHHHCC----------SCCCHHHHHHHHTSCHHHH--------------HHHHHHSEEEEEECCCTTTCEEE
T ss_pred HHHHHHHHcCCCCC----------CCCChHHHHHHHHHHhcCh--------------hhhhhcCeEEeeEecCcccCcEE
Confidence 45566667664321 1469999999998754331 11234678999999999999999
Q ss_pred EEEEeCCCCeEEEEecChhhhhhhhhccC-----------CchHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHH
Q 001341 501 VVVKDCHSGNISLLSKGADEAILPYAHAG-----------QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 569 (1096)
Q Consensus 501 viv~~~~~~~~~l~~KGa~~~il~~~~~~-----------~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~ 569 (1096)
++++.+ +|++++|+|||||.|+++|... ...+.+.+.+++|+.+|+|||++|||.++.++.
T Consensus 73 vv~~~~-~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~------- 144 (170)
T 3gwi_A 73 VVVAEN-TEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREG------- 144 (170)
T ss_dssp EEEESS-SSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSS-------
T ss_pred EEEEeC-CCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcc-------
Confidence 999875 5788999999999999999731 123578899999999999999999999875320
Q ss_pred HHHhhhhchHHHHHHHHHHHhhcCcEEEEEeecccc
Q 001341 570 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDR 605 (1096)
Q Consensus 570 ~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~ 605 (1096)
.. ....|+||+|+|++|+-|.
T Consensus 145 -----~~----------~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 145 -----DY----------QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp -----CC----------CGGGSCSEEEEEEEEEEC-
T ss_pred -----cc----------CccccCCcEEEehhccccc
Confidence 00 0235899999999999885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-16 Score=176.97 Aligned_cols=142 Identities=14% Similarity=0.115 Sum_probs=103.3
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCC
Q 001341 602 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 681 (1096)
Q Consensus 602 ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1096)
..++++|+++++++.|+++|+++.|+|||...++.++++++|+..++.. +. .+....+
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~--i~-~n~l~~~------------------- 195 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVK--VV-SNFMDFD------------------- 195 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEE--EE-EECEEEC-------------------
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccce--EE-eeeEEEc-------------------
Confidence 3579999999999999999999999999999999999999998655321 11 1110000
Q ss_pred CCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhh---hcCee
Q 001341 682 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ---KADIG 758 (1096)
Q Consensus 682 ~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~---~AdvG 758 (1096)
.......+.+ .....+++..|.+|...+..+++.++.|+|+|||+||+||++ .||+|
T Consensus 196 ~~~~~~~~~~--------------------~~i~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advg 255 (297)
T 4fe3_A 196 ENGVLKGFKG--------------------ELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHI 255 (297)
T ss_dssp TTSBEEEECS--------------------SCCCTTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEE
T ss_pred ccceeEeccc--------------------cccchhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeE
Confidence 0000000111 012345667788888888888888899999999999999955 99999
Q ss_pred EEecC-------CchHHHHhhccccccccchhhhH
Q 001341 759 VGISG-------REGLQAARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 759 Iam~g-------~~~~~a~~~aD~vl~~f~~l~~l 786 (1096)
|+| | +....++++||+||.++++....
T Consensus 256 iai-Gfl~~~v~~~~d~~~e~~Divl~~d~~~~v~ 289 (297)
T 4fe3_A 256 LKI-GYLNDRVDELLEKYMDSYDIVLVKEESLEVV 289 (297)
T ss_dssp EEE-EEECSSHHHHHHHHHHHSSEEEETCCBCHHH
T ss_pred EEE-EecchhHHHhHHHHHhhCCEEEECCCChHHH
Confidence 999 5 22333456999999998886654
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.14 E-value=2.7e-10 Score=125.40 Aligned_cols=189 Identities=19% Similarity=0.213 Sum_probs=115.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC---CC----C-------CCCeEEEEcCCcHHHHHHHHH
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI---SP----E-------PKGQLLSIDGKTEDEVCRSLE 669 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~---~~----~-------~~~~~~~~~~~~~~~~~~~~~ 669 (1096)
..+.+.+.++|++++++|++++++||+....+..+...+|+. .+ + ..++.+.....+.+.+.+.++
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~ 100 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYE 100 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 357788999999999999999999999999999999999873 11 0 011222222223333333222
Q ss_pred HHHHH-cc--c------------------------------------cCCCCCcEEEEEcChhHHHHHHHHHHHHhh-hh
Q 001341 670 RVLLT-MR--I------------------------------------TTSEPKDVAFVVDGWALEIALKHYRKAFTE-LA 709 (1096)
Q Consensus 670 ~~~~~-~~--~------------------------------------~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~-l~ 709 (1096)
...+. .. . ......+..+..+...++.+.+.+.+.|.. +.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 4dw8_A 101 CARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKIN 180 (279)
T ss_dssp HHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTCE
T ss_pred HHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCEE
Confidence 22111 00 0 011122222222223444444445444422 33
Q ss_pred hccceeEEEeeChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccch-
Q 001341 710 ILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF- 782 (1096)
Q Consensus 710 ~~~~~~i~~r~tP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~- 782 (1096)
.......+.++.|. .|+..++.+.+ ..+.|+++||+.||++|++.|++||+| |++..+++.+||++..+.+.
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~~~e~ 259 (279)
T 4dw8_A 181 VFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM-GNAQEPVKKAADYITLTNDED 259 (279)
T ss_dssp EEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCCGGGT
T ss_pred EEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc-CCCcHHHHHhCCEEcCCCCCc
Confidence 33334456688887 79988887765 246799999999999999999999999 88888899999999865332
Q ss_pred -----hhhHHHhhchh
Q 001341 783 -----LKRLILVHGRY 793 (1096)
Q Consensus 783 -----l~~lll~~GR~ 793 (1096)
+.+++..+|+.
T Consensus 260 Gv~~~i~~~~~~~~~~ 275 (279)
T 4dw8_A 260 GVAEAIERIFNVEGHH 275 (279)
T ss_dssp HHHHHHHHHC------
T ss_pred HHHHHHHHHHhccccc
Confidence 44444556653
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.12 E-value=4.5e-10 Score=124.40 Aligned_cols=194 Identities=18% Similarity=0.195 Sum_probs=117.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC----C------CCCeEEEEcCCcHHHHHHHHHHHHH
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----E------PKGQLLSIDGKTEDEVCRSLERVLL 673 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (1096)
..+.+.+.++|++++++|+++.++||+....+..+...+|+..+ + ..++.+.....+.+.+.+.++...+
T Consensus 22 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~l~~~~~~~i~~~~~~ 101 (290)
T 3dnp_A 22 GKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLES 101 (290)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSCSEECCCCHHHHHHHHHHHHT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCEEEecCCCHHHHHHHHHHHHH
Confidence 35778899999999999999999999999999999999987421 0 0011112222233333333332211
Q ss_pred H-ccc----------c-------------------------------------CCCCCcEEEEEcChhHHHHHHHHHHHH
Q 001341 674 T-MRI----------T-------------------------------------TSEPKDVAFVVDGWALEIALKHYRKAF 705 (1096)
Q Consensus 674 ~-~~~----------~-------------------------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f 705 (1096)
. ... . .....++.+..+...++.+.+.+...+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~ 181 (290)
T 3dnp_A 102 YQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETITKAF 181 (290)
T ss_dssp SSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEEEEECCGGGHHHHHHHHHHHC
T ss_pred cCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhhC
Confidence 1 000 0 000112222223333444444432233
Q ss_pred hhhhhccceeEEEeeChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 706 TELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 706 ~~l~~~~~~~i~~r~tP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
..+........+.++.|. .|+..++.+.+ . .+.|+++||+.||++|++.|++||+| ||+..+++..||++..+
T Consensus 182 ~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~s 260 (290)
T 3dnp_A 182 PAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM-GNAVPEIKRKADWVTRS 260 (290)
T ss_dssp TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCC
T ss_pred CcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe-cCCcHHHHHhcCEECCC
Confidence 333333334455677775 69988887765 2 35799999999999999999999999 88888899999999865
Q ss_pred cch------hhhHHHhhchhhhhhh
Q 001341 780 FRF------LKRLILVHGRYSYNRT 798 (1096)
Q Consensus 780 f~~------l~~lll~~GR~~~~~i 798 (1096)
.+. +.+++...+++-|.+-
T Consensus 261 ~~edGv~~~i~~~~~~~~~~~~~~~ 285 (290)
T 3dnp_A 261 NDEQGVAYMMKEYFRMQQRKGFLDK 285 (290)
T ss_dssp TTTTHHHHHHHHHHHHHHHC-----
T ss_pred CCccHHHHHHHHHHHhcCcccHHhH
Confidence 332 4444445566655543
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.08 E-value=5.4e-10 Score=122.95 Aligned_cols=174 Identities=16% Similarity=0.194 Sum_probs=104.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCC-------------CCeEEEEcCCcHHHHHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP-------------KGQLLSIDGKTEDEVCRSLERV 671 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~ 671 (1096)
.+.+.+.++|++++++|+++.++||+....+..+...+|+..+.. .++.+.....+.+.+.+.++..
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~~ 101 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAWA 101 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHHH
Confidence 567889999999999999999999999999999999999753211 1122222333333333333222
Q ss_pred HHH-ccc--------------------------------------c-CCCCCcEEEEEcChhHHHHHHHHHHHHhh-hhh
Q 001341 672 LLT-MRI--------------------------------------T-TSEPKDVAFVVDGWALEIALKHYRKAFTE-LAI 710 (1096)
Q Consensus 672 ~~~-~~~--------------------------------------~-~~~~~~~~lvi~g~~l~~~~~~~~~~f~~-l~~ 710 (1096)
.+. ... . .....+..+..+...++...+.+.+.|.. +..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (279)
T 3mpo_A 102 RKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFSV 181 (279)
T ss_dssp HHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEEE
T ss_pred HHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEEE
Confidence 111 000 0 01111222222223333333333333322 223
Q ss_pred ccceeEEEeeChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 711 LSRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 711 ~~~~~i~~r~tP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
......+.++.|. .|+..++.+.+ . .+.++++||+.||++|++.|++||+| ||+..+++..||++..+
T Consensus 182 ~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~ 255 (279)
T 3mpo_A 182 VQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAM-GNAIDEVKEAAQAVTLT 255 (279)
T ss_dssp ECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC--
T ss_pred EEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeec-cCCCHHHHHhcceeccC
Confidence 3344556778886 59988887765 2 36799999999999999999999999 88888899999999864
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.7e-10 Score=116.65 Aligned_cols=134 Identities=13% Similarity=0.091 Sum_probs=100.5
Q ss_pred EEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHH
Q 001341 595 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLT 674 (1096)
Q Consensus 595 ~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (1096)
..++...++|.+ +|+.|+++|+++.++||+....+..+++.+|+...
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~--------------------------- 88 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHL--------------------------- 88 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEE---------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHH---------------------------
Confidence 455556665554 99999999999999999999999999999998311
Q ss_pred ccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh----cCCeEEEEcCCccChh
Q 001341 675 MRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVR 750 (1096)
Q Consensus 675 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ 750 (1096)
+.. +..|...++.+.+ ..+.++++||+.||++
T Consensus 89 ------------------------------------------f~~--~~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~ 124 (189)
T 3mn1_A 89 ------------------------------------------FQG--REDKLVVLDKLLAELQLGYEQVAYLGDDLPDLP 124 (189)
T ss_dssp ------------------------------------------ECS--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred ------------------------------------------hcC--cCChHHHHHHHHHHcCCChhHEEEECCCHHHHH
Confidence 001 1556666665554 2468999999999999
Q ss_pred hhhhcCeeEEecCCchHHHHhhcccccccc------chhhhHHHhhchhhhhhhhhhhhHhhh
Q 001341 751 MIQKADIGVGISGREGLQAARAADYSIGKF------RFLKRLILVHGRYSYNRTAFLSQYSFY 807 (1096)
Q Consensus 751 ml~~AdvGIam~g~~~~~a~~~aD~vl~~f------~~l~~lll~~GR~~~~~i~~~i~~~~~ 807 (1096)
|++.|++|+++ ++....++..||+++.+. +.+... +...|..+.++.+.+.|.+.
T Consensus 125 ~~~~ag~~~~~-~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~~ 185 (189)
T 3mn1_A 125 VIRRVGLGMAV-ANAASFVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGHH 185 (189)
T ss_dssp HHHHSSEEEEC-TTSCHHHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC-
T ss_pred HHHHCCCeEEe-CCccHHHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhcccc
Confidence 99999999999 666667778999999863 334343 35677788888776666544
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.04 E-value=9.8e-10 Score=121.28 Aligned_cols=175 Identities=14% Similarity=0.116 Sum_probs=113.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC----CC-----CCeEEEEcCCcHHHHHHHHHHHHHH-
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----EP-----KGQLLSIDGKTEDEVCRSLERVLLT- 674 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~- 674 (1096)
.+.+.+.++|++++++|++++++||+....+..+...+++..+ +. .++.+.....+.+.+.+.++...+.
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 5778999999999999999999999999999998888775311 00 1122322333344333333222211
Q ss_pred -------------------------ccc--------------cC-CCCCcEEEEEcChhHHHHHHHHHHHHhh-hhhccc
Q 001341 675 -------------------------MRI--------------TT-SEPKDVAFVVDGWALEIALKHYRKAFTE-LAILSR 713 (1096)
Q Consensus 675 -------------------------~~~--------------~~-~~~~~~~lvi~g~~l~~~~~~~~~~f~~-l~~~~~ 713 (1096)
+.. .. ....++.+..+....+...+.+.+.|.. +.....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s 198 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAA 198 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEE
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHHHHHHHHHHhcCCEEEEEe
Confidence 000 00 1122223322444454444445555542 222233
Q ss_pred eeEEEeeChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcccccccc
Q 001341 714 TAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 714 ~~i~~r~tP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
...+.+++|. .|+..++.+.+ . .+.|+++||+.||++|++.|++||+| ||+...++..||++..+.
T Consensus 199 ~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~s~ 270 (283)
T 3dao_A 199 GKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV-SNARQEVIAAAKHTCAPY 270 (283)
T ss_dssp TTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE-TTSCHHHHHHSSEEECCG
T ss_pred cCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc-CCCCHHHHHhcCeECCCC
Confidence 4456777776 59998888765 2 36799999999999999999999999 888888999999998753
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.04 E-value=8.6e-10 Score=121.87 Aligned_cols=171 Identities=20% Similarity=0.182 Sum_probs=110.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC----------CCCCeEEEEcCCcHHHHHHHHHHHHH
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----------EPKGQLLSIDGKTEDEVCRSLERVLL 673 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (1096)
..+.+.+.++|++++++|++++++||+....+..+...+|+..+ +..++.+.-...+.+.+.+.++....
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 45778899999999999999999999999999999999997421 01122333333333433333221110
Q ss_pred H--ccc----------cC-----------------------CCCC--cEEEEEcC--hhHHHHHHHHHHHHhh-hhhccc
Q 001341 674 T--MRI----------TT-----------------------SEPK--DVAFVVDG--WALEIALKHYRKAFTE-LAILSR 713 (1096)
Q Consensus 674 ~--~~~----------~~-----------------------~~~~--~~~lvi~g--~~l~~~~~~~~~~f~~-l~~~~~ 713 (1096)
. ... .. .... ...++.++ +.++.+.+.+.+.|.. +.....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 0 000 00 0001 11223322 3444444555555532 222333
Q ss_pred eeEEEeeChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccc
Q 001341 714 TAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 775 (1096)
Q Consensus 714 ~~i~~r~tP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~ 775 (1096)
...+.++.|. .|+..++.+.+ . .+.++++||+.||++|++.|++||+| ||+..+++++||+
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm-~Na~~~vk~~A~~ 263 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM-ANAHQRLKDLHPE 263 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCTT
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc-cCCCHHHHHhCCC
Confidence 4456778885 59998888765 2 36799999999999999999999999 9999999999986
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.03 E-value=6.5e-10 Score=118.36 Aligned_cols=171 Identities=17% Similarity=0.169 Sum_probs=104.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCCeEEEE-cC------CcHHHHHHHHHHHHH
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI-DG------KTEDEVCRSLERVLL 673 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~~~~~~-~~------~~~~~~~~~~~~~~~ 673 (1096)
..++.+++.++|++|+++|++++++|||....+..++.++|+..+ ..+|..+.. ++ ... +....+ +.+.
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l-~~~~~i-~~~~ 97 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNE-GTNKFL-EEMS 97 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSH-HHHHHH-HHHT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccH-HHHHHH-HHHH
Confidence 456788999999999999999999999999999999999987432 001111111 11 112 222222 2221
Q ss_pred HccccCC------CCCcEEE-EEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh--hhHHHHHHHHHhc----CCeEE
Q 001341 674 TMRITTS------EPKDVAF-VVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSC----DYRTL 740 (1096)
Q Consensus 674 ~~~~~~~------~~~~~~l-vi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP--~qK~~iV~~lk~~----~~~v~ 740 (1096)
....... ....... +..+. ....+.+.+.| .+... ....+.+++| .+|+..++.+.+. .+.++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~-~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~ 173 (227)
T 1l6r_A 98 KRTSMRSILTNRWREASTGFDIDPED--VDYVRKEAESR-GFVIF-YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEIL 173 (227)
T ss_dssp TTSSCBCCGGGGGCSSSEEEBCCGGG--HHHHHHHHHTT-TEEEE-EETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred HHhcCCccccccceecccceEEecCC--HHHHHHHHHhc-CEEEE-ecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEE
Confidence 1000000 0000000 00010 11112222223 22222 3344667778 4799999888752 35799
Q ss_pred EEcCCccChhhhhhcCeeEEecCCchHHHHhhcccccccc
Q 001341 741 AIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 741 ~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
++||+.||++|++.|++||+| |++...++..||+++.+.
T Consensus 174 ~iGD~~nD~~m~~~ag~~va~-~n~~~~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 174 VIGDSNNDMPMFQLPVRKACP-ANATDNIKAVSDFVSDYS 212 (227)
T ss_dssp EECCSGGGHHHHTSSSEEEEC-TTSCHHHHHHCSEECSCC
T ss_pred EECCcHHhHHHHHHcCceEEe-cCchHHHHHhCCEEecCC
Confidence 999999999999999999999 777777888999998754
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.4e-09 Score=121.43 Aligned_cols=175 Identities=14% Similarity=0.131 Sum_probs=109.7
Q ss_pred cCCCC-hHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC----CC-----CCeEEEEcCCcHHHHHHHHHHHHHH
Q 001341 605 RLQDG-VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----EP-----KGQLLSIDGKTEDEVCRSLERVLLT 674 (1096)
Q Consensus 605 ~lr~~-v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (1096)
.+.+. +.++|++++++|++++++||+....+..+...+++..+ +. .++.+.....+.+.+.+.++...+.
T Consensus 54 ~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~ 133 (304)
T 3l7y_A 54 SYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEK 133 (304)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECCEEEEEecCCHHHHHHHHHHHHHh
Confidence 35566 78999999999999999999999998887766664211 00 1112222222344444333322221
Q ss_pred c-c-------------------------------------cc---CCCCCcEEEEEcChhHHHHHHHHHHHHhh--hhhc
Q 001341 675 M-R-------------------------------------IT---TSEPKDVAFVVDGWALEIALKHYRKAFTE--LAIL 711 (1096)
Q Consensus 675 ~-~-------------------------------------~~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~~--l~~~ 711 (1096)
. . .. .....+..+..+...++.+.+.+.+.|.. +...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 213 (304)
T 3l7y_A 134 YPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFKLTLQVKEEESAQIMKAIADYKTSQRLVGT 213 (304)
T ss_dssp CTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEEEEEECCGGGHHHHHHHHHTSTTTTTEEEE
T ss_pred cCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEEEEEEcCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 0 0 00 00011222233333444454444444443 3333
Q ss_pred cceeEEEeeChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcccccccc
Q 001341 712 SRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 712 ~~~~i~~r~tP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
.....+.++.|. .|+..++.+.+ . .+.|++|||+.||++|++.|++||+| ||+..+++..||++..+.
T Consensus 214 ~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~~~ 287 (304)
T 3l7y_A 214 ASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM-ANAPKNVKAAANYQAKSN 287 (304)
T ss_dssp ECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC-TTSCHHHHHHCSEECCCG
T ss_pred EcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc-CCcCHHHHHhccEEcCCC
Confidence 334456677775 69988888765 2 36799999999999999999999999 888888999999998753
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.84 E-value=1.2e-08 Score=111.62 Aligned_cols=172 Identities=14% Similarity=0.175 Sum_probs=104.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC-CCCC-------eEEEEcCCcHHHHHHHHHHHHHH-c
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-EPKG-------QLLSIDGKTEDEVCRSLERVLLT-M 675 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~ 675 (1096)
.+.+.+.++|++++++|+++.++||+....+..+...+|+... ..++ +.+.....+.+.+.+.++...+. .
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 101 (274)
T 3fzq_A 22 GIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLYNQSFNQRLIKEVVCLLKKREV 101 (274)
T ss_dssp BCCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEEEECCCCHHHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEEEEcCCCHHHHHHHHHHHHHCCc
Confidence 4678899999999999999999999999999888888776310 0011 11222222333333322221110 0
Q ss_pred cc----------------------------------------------c---CCCCCcEEEEEcChhHHHHHHHHHHHHh
Q 001341 676 RI----------------------------------------------T---TSEPKDVAFVVDGWALEIALKHYRKAFT 706 (1096)
Q Consensus 676 ~~----------------------------------------------~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~ 706 (1096)
.. . .....+..+. ... ...+.+.+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~~~---~~~~~~~~~l~ 177 (274)
T 3fzq_A 102 AFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKICLW-SNE---KVFDEVKDILQ 177 (274)
T ss_dssp EEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCSSCCCCEEEEE-CCH---HHHHHHHHHHG
T ss_pred eEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhcccCeEEEEEE-cCH---HHHHHHHHHhh
Confidence 00 0 0111122222 211 12223333333
Q ss_pred h-hhhcccee--EEEeeChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccc
Q 001341 707 E-LAILSRTA--ICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 777 (1096)
Q Consensus 707 ~-l~~~~~~~--i~~r~tP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl 777 (1096)
. +....... .+.++.|. .|+..++.+.+ ..+.++++||+.||++|++.|++||+| |++..+++..||++.
T Consensus 178 ~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~ 256 (274)
T 3fzq_A 178 DKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM-KNSHQQLKDIATSIC 256 (274)
T ss_dssp GGEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEE-TTSCHHHHHHCSEEE
T ss_pred cceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEe-cCccHHHHHhhhhee
Confidence 2 11111112 34456665 58888877664 346799999999999999999999999 888888999999998
Q ss_pred cccc
Q 001341 778 GKFR 781 (1096)
Q Consensus 778 ~~f~ 781 (1096)
.+.+
T Consensus 257 ~~~~ 260 (274)
T 3fzq_A 257 EDIF 260 (274)
T ss_dssp CCGG
T ss_pred CCCc
Confidence 7533
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.82 E-value=3e-08 Score=107.64 Aligned_cols=174 Identities=18% Similarity=0.211 Sum_probs=103.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC-CCCC-------eEEEEcCCcHHHHHHHHHHHHHH-
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-EPKG-------QLLSIDGKTEDEVCRSLERVLLT- 674 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~- 674 (1096)
..+.+.+.++|++++++|+++.++||+....+..+..++++..- ..++ +.+.....+.+.+.+.++...+.
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~~~~~~~~~~i~~~~~~~~ 98 (258)
T 2pq0_A 19 KQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQPLRREKVRALTEEAHKNG 98 (258)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEecCCHHHHHHHHHHHHhCC
Confidence 35678889999999999999999999999999999888875210 0011 12222223333333333222110
Q ss_pred cc--cc-CCC--------------------------------CCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEe
Q 001341 675 MR--IT-TSE--------------------------------PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR 719 (1096)
Q Consensus 675 ~~--~~-~~~--------------------------------~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r 719 (1096)
.. .. ... ..-+.+++.+..- ......+.+..+.......-+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~e 176 (258)
T 2pq0_A 99 HPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAE--EEEPYVRNYPEFRFVRWHDVSTD 176 (258)
T ss_dssp CCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHH--HHHHHHHHCTTEEEEEEETTEEE
T ss_pred CeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHH--HHHHHHHhCCCeEEEEeCCceEE
Confidence 00 00 000 0011122222210 01111222222211112223455
Q ss_pred eChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcccccccc
Q 001341 720 VTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 720 ~tP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
+.|. .|+..++.+.+ ..+.|+++||+.||++|++.|++||+| ||+..+++..||++..+.
T Consensus 177 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~~~ 242 (258)
T 2pq0_A 177 VLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM-GNAHEEVKRVADFVTKPV 242 (258)
T ss_dssp EEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE-TTCCHHHHHTCSEEECCG
T ss_pred EEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe-CCCcHHHHHhCCEEeCCC
Confidence 6665 69988887765 246799999999999999999999999 888888888999998653
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.80 E-value=4.2e-09 Score=108.96 Aligned_cols=97 Identities=20% Similarity=0.136 Sum_probs=77.4
Q ss_pred HHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Q 001341 612 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 691 (1096)
Q Consensus 612 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 691 (1096)
.+|+.|+++|+++.++||+....+..+++++|+..
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--------------------------------------------- 93 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL--------------------------------------------- 93 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------------------------
Confidence 34999999999999999999999999999999831
Q ss_pred hhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEecCCchH
Q 001341 692 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 767 (1096)
Q Consensus 692 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~ 767 (1096)
++... ..|...++.+.+ ..+.++++||+.||++|++.|++|++| ++...
T Consensus 94 ------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~-~na~~ 146 (195)
T 3n07_A 94 ------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCV-ADGHP 146 (195)
T ss_dssp ------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSCH
T ss_pred ------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEE-CChHH
Confidence 01111 345555554443 346799999999999999999999999 77777
Q ss_pred HHHhhcccccccc
Q 001341 768 QAARAADYSIGKF 780 (1096)
Q Consensus 768 ~a~~~aD~vl~~f 780 (1096)
.++..||+++.+.
T Consensus 147 ~~~~~ad~v~~~~ 159 (195)
T 3n07_A 147 LLAQRANYVTHIK 159 (195)
T ss_dssp HHHHHCSEECSSC
T ss_pred HHHHhCCEEEcCC
Confidence 7888999999753
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.80 E-value=7.2e-09 Score=104.27 Aligned_cols=107 Identities=17% Similarity=0.155 Sum_probs=83.9
Q ss_pred cCcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHH--HcCCCCCCCCCeEEEEcCCcHHHHHHHHH
Q 001341 592 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL--SCNFISPEPKGQLLSIDGKTEDEVCRSLE 669 (1096)
Q Consensus 592 ~~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~--~~gl~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (1096)
.+...++.+.++|.. +|+.|+++|+++.++||+ ..+..+++ .+|+.
T Consensus 29 ~~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------ 76 (168)
T 3ewi_A 29 GDQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------ 76 (168)
T ss_dssp SSCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC------------------------
T ss_pred CCCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE------------------------
Confidence 344667777888773 899999999999999999 67778888 45541
Q ss_pred HHHHHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh-c---CCeEEEEcCC
Q 001341 670 RVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-C---DYRTLAIGDG 745 (1096)
Q Consensus 670 ~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~-~---~~~v~~iGDG 745 (1096)
++ ..+.+|...++.+.+ . .+.++++||+
T Consensus 77 ----------------------------------------------~~--~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~ 108 (168)
T 3ewi_A 77 ----------------------------------------------TE--VSVSDKLATVDEWRKEMGLCWKEVAYLGNE 108 (168)
T ss_dssp ----------------------------------------------EE--CSCSCHHHHHHHHHHHTTCCGGGEEEECCS
T ss_pred ----------------------------------------------EE--ECCCChHHHHHHHHHHcCcChHHEEEEeCC
Confidence 00 123467777766654 2 4679999999
Q ss_pred ccChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 746 GNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 746 ~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
.||++|++.|+++++| ++....+++.||+++.+
T Consensus 109 ~nDi~~~~~ag~~~a~-~na~~~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 109 VSDEECLKRVGLSAVP-ADACSGAQKAVGYICKC 141 (168)
T ss_dssp GGGHHHHHHSSEEEEC-TTCCHHHHTTCSEECSS
T ss_pred HhHHHHHHHCCCEEEe-CChhHHHHHhCCEEeCC
Confidence 9999999999999999 77777888899999975
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.79 E-value=9.1e-09 Score=107.84 Aligned_cols=107 Identities=17% Similarity=0.113 Sum_probs=83.9
Q ss_pred EEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHc
Q 001341 596 VLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM 675 (1096)
Q Consensus 596 llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (1096)
.+....+.|.+ +|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 44555555555 9999999999999999999999999999999821
Q ss_pred cccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh----cCCeEEEEcCCccChhh
Q 001341 676 RITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRM 751 (1096)
Q Consensus 676 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~m 751 (1096)
++..+ ..|..+++.+.+ ..+.++++||+.||++|
T Consensus 118 ----------------------------------------~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~ 155 (211)
T 3ij5_A 118 ----------------------------------------LYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPV 155 (211)
T ss_dssp ----------------------------------------EECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred ----------------------------------------hhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHH
Confidence 11111 456666666554 25789999999999999
Q ss_pred hhhcCeeEEecCCchHHHHhhcccccccc
Q 001341 752 IQKADIGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 752 l~~AdvGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
++.|++++++ ++....++..||+++.+.
T Consensus 156 ~~~ag~~~a~-~~~~~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 156 MAQVGLSVAV-ADAHPLLLPKAHYVTRIK 183 (211)
T ss_dssp HTTSSEEEEC-TTSCTTTGGGSSEECSSC
T ss_pred HHHCCCEEEe-CCccHHHHhhCCEEEeCC
Confidence 9999999999 655556777899999764
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.9e-08 Score=102.41 Aligned_cols=94 Identities=17% Similarity=0.154 Sum_probs=77.1
Q ss_pred HHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcCh
Q 001341 613 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 692 (1096)
Q Consensus 613 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 692 (1096)
+|+.|+++|+++.++||+....+..+++.+|+.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------------------------- 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------------------------- 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----------------------------------------------
Confidence 999999999999999999999999999999982
Q ss_pred hHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEecCCchHH
Q 001341 693 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 768 (1096)
Q Consensus 693 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 768 (1096)
++.. ...|...++.+.+ ..+.++++||+.||++|++.|++|+++ ++....
T Consensus 80 -----------------------~~~~--~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~-~~~~~~ 133 (176)
T 3mmz_A 80 -----------------------VLHG--IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAV-ASAHDV 133 (176)
T ss_dssp -----------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHH
T ss_pred -----------------------eEeC--CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEEC-CChhHH
Confidence 0111 1456666665543 246799999999999999999999999 666666
Q ss_pred HHhhccccccc
Q 001341 769 AARAADYSIGK 779 (1096)
Q Consensus 769 a~~~aD~vl~~ 779 (1096)
++..||+++.+
T Consensus 134 ~~~~ad~v~~~ 144 (176)
T 3mmz_A 134 VRGAARAVTTV 144 (176)
T ss_dssp HHHHSSEECSS
T ss_pred HHHhCCEEecC
Confidence 77899999986
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=1.9e-08 Score=102.76 Aligned_cols=103 Identities=15% Similarity=0.072 Sum_probs=80.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcE
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 685 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (1096)
+.+++.++|+.|+++|++++++||++...+..+++.+|+.. .++
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------~~~---------------------------- 79 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------FFL---------------------------- 79 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE--------EEE----------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce--------eec----------------------------
Confidence 33456789999999999999999999999999999999831 001
Q ss_pred EEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCeeEEe
Q 001341 686 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIGVGI 761 (1096)
Q Consensus 686 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~AdvGIam 761 (1096)
....|...++.+.+ .+ +.++++||+.||++|++.|++++++
T Consensus 80 -----------------------------------~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~ 124 (180)
T 1k1e_A 80 -----------------------------------GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV 124 (180)
T ss_dssp -----------------------------------SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred -----------------------------------CCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEe
Confidence 01345555554432 23 6799999999999999999999999
Q ss_pred cCCchHHHHhhcccccccc
Q 001341 762 SGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 762 ~g~~~~~a~~~aD~vl~~f 780 (1096)
++....++..||+++.+.
T Consensus 125 -~~~~~~~~~~ad~v~~~~ 142 (180)
T 1k1e_A 125 -ADAPIYVKNAVDHVLSTH 142 (180)
T ss_dssp -TTSCHHHHTTSSEECSSC
T ss_pred -CCccHHHHhhCCEEecCC
Confidence 666666777999999764
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.75 E-value=6e-08 Score=106.83 Aligned_cols=175 Identities=17% Similarity=0.201 Sum_probs=105.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCC-----CCCeEEE---------EcCCcHHHHHHHHH
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-----PKGQLLS---------IDGKTEDEVCRSLE 669 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~-----~~~~~~~---------~~~~~~~~~~~~~~ 669 (1096)
..+.+.+.++|++++++|++++++|||....+..+..++++..+. .+|..+. -...+.+.+.+.++
T Consensus 21 ~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~~~~~i~~ 100 (282)
T 1rkq_A 21 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 100 (282)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 357788999999999999999999999999999999999874311 1111222 11122333332222
Q ss_pred HHHHH-cc--c--------cC-----------------------------CCCCcEEEEEcChhHHHHHHHHHHHHh-hh
Q 001341 670 RVLLT-MR--I--------TT-----------------------------SEPKDVAFVVDGWALEIALKHYRKAFT-EL 708 (1096)
Q Consensus 670 ~~~~~-~~--~--------~~-----------------------------~~~~~~~lvi~g~~l~~~~~~~~~~f~-~l 708 (1096)
...+. .. . .. ....++.+..+.+.++.+.+.+.+.+. .+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~ 180 (282)
T 1rkq_A 101 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 180 (282)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCE
Confidence 11110 00 0 00 000111111111223333332222232 12
Q ss_pred hhccceeEEEeeChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 709 AILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 709 ~~~~~~~i~~r~tP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
....+..-+.+++|. .|+..++.+.+. .+.++++||+.||++|++.|++||+| |++...++..||+++.+
T Consensus 181 ~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~n~~~~~~~~a~~v~~~ 256 (282)
T 1rkq_A 181 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV-DNAIPSVKEVANFVTKS 256 (282)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCC
T ss_pred EEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEe-cCCcHHHHhhCCEEecC
Confidence 222223335688887 799988887652 35799999999999999999999999 77767777899999865
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.73 E-value=1.7e-08 Score=110.20 Aligned_cols=64 Identities=30% Similarity=0.486 Sum_probs=54.0
Q ss_pred EEEeeChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcccccccc
Q 001341 716 ICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 716 i~~r~tP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
.+.++.|. .|+..++.+.+ . .+.++++||+.||++|++.|++||+| ||+..+++++||++..+.
T Consensus 184 ~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~~~ 253 (268)
T 3r4c_A 184 LFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM-GNASEKVQSVADFVTDTV 253 (268)
T ss_dssp TEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHTCSEECCCT
T ss_pred CeEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe-CCCcHHHHHhcCEeeCCC
Confidence 35566775 69988887765 2 35799999999999999999999999 898889999999998753
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.71 E-value=4.4e-08 Score=107.18 Aligned_cols=175 Identities=16% Similarity=0.173 Sum_probs=103.6
Q ss_pred cCCCCh-HHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCC-------eEEEEcCCcHHHHHHHHHHHHHH
Q 001341 605 RLQDGV-PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKG-------QLLSIDGKTEDEVCRSLERVLLT 674 (1096)
Q Consensus 605 ~lr~~v-~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 674 (1096)
.+.+.+ .++|++|+++|++++++|||....+..+..++++..+ ..+| +.+.....+.+.+.+.++...+.
T Consensus 20 ~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~ 99 (271)
T 1rlm_A 20 TYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKD 99 (271)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCeEEEEecCCHHHHHHHHHHHHhC
Confidence 355664 8999999999999999999999988877766653211 0011 12222222333333333222110
Q ss_pred ccc-------------------------------c---C-----CCCCcEEEEEcChhHHHHHHHHHHHHhh-hhhccce
Q 001341 675 MRI-------------------------------T---T-----SEPKDVAFVVDGWALEIALKHYRKAFTE-LAILSRT 714 (1096)
Q Consensus 675 ~~~-------------------------------~---~-----~~~~~~~lvi~g~~l~~~~~~~~~~f~~-l~~~~~~ 714 (1096)
... . . ....+..+..+....+.+.+.+.+.+.. +......
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s~ 179 (271)
T 1rlm_A 100 KQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSG 179 (271)
T ss_dssp TTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHHHHHHHHHHTTTSSEEEECS
T ss_pred CCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEEEcCHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 000 0 0 0001122222333344444444444432 2212222
Q ss_pred eEEEeeChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcccccccc
Q 001341 715 AICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 715 ~i~~r~tP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
..+.++.|. .|+..++.+.+. .+.++++||+.||++|++.|++||+| |++..+++..||+++.+.
T Consensus 180 ~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~~~k~~a~~v~~~~ 250 (271)
T 1rlm_A 180 FGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM-GNAAENIKQIARYATDDN 250 (271)
T ss_dssp TTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC-TTCCHHHHHHCSEECCCG
T ss_pred CCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEe-CCccHHHHHhCCeeCcCC
Confidence 234466665 799888887652 35799999999999999999999999 787777888999998753
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.71 E-value=2.6e-08 Score=112.72 Aligned_cols=123 Identities=22% Similarity=0.252 Sum_probs=85.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.++++.|+++|+++.++||+....+..++..+|+..--.. .+.+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~--~l~~---------------------------- 227 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSN--TLEI---------------------------- 227 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEE----------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEee--eeEe----------------------------
Confidence 6899999999999999999999999999999999999998321000 0000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEe-eChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeE
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGV 759 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r-~tP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGI 759 (1096)
.+|. ....+... ..+..|...++.+.+ ..+.++++|||.||++|++.|++|+
T Consensus 228 ----~d~~-------------------~tg~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~v 284 (335)
T 3n28_A 228 ----VSGK-------------------LTGQVLGEVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGV 284 (335)
T ss_dssp ----ETTE-------------------EEEEEESCCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred ----eCCe-------------------eeeeecccccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeE
Confidence 0000 00000001 123456655554443 3478999999999999999999999
Q ss_pred EecCCchHHHHhhccccccccch
Q 001341 760 GISGREGLQAARAADYSIGKFRF 782 (1096)
Q Consensus 760 am~g~~~~~a~~~aD~vl~~f~~ 782 (1096)
+| +....++..||+++...++
T Consensus 285 a~--~~~~~~~~~a~~v~~~~~l 305 (335)
T 3n28_A 285 AY--HAKPKVEAKAQTAVRFAGL 305 (335)
T ss_dssp EE--SCCHHHHTTSSEEESSSCT
T ss_pred Ee--CCCHHHHhhCCEEEecCCH
Confidence 99 4445577799998854333
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.71 E-value=7.8e-08 Score=106.92 Aligned_cols=176 Identities=14% Similarity=0.138 Sum_probs=106.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHH--HHcC-CCCCC-----C--------CCeEEEEcCCcHHHHHHH
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA--LSCN-FISPE-----P--------KGQLLSIDGKTEDEVCRS 667 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia--~~~g-l~~~~-----~--------~~~~~~~~~~~~~~~~~~ 667 (1096)
..+.+.+.++|++|+++|++++++||+....+..+. .+++ +..+. . .++++.....+.+.+...
T Consensus 44 ~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i 123 (301)
T 2b30_A 44 IKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAEL 123 (301)
T ss_dssp TCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEECTTCCEEEECCCCHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeEEEeCCCCEEEEccCCHHHHHHH
Confidence 357788999999999999999999999999999998 8777 53110 0 111222222233333333
Q ss_pred HHHHHH-Hc-c--cc--C-------C----------------------------CCCcEEEEEcChhHHHHHHHHHHHHh
Q 001341 668 LERVLL-TM-R--IT--T-------S----------------------------EPKDVAFVVDGWALEIALKHYRKAFT 706 (1096)
Q Consensus 668 ~~~~~~-~~-~--~~--~-------~----------------------------~~~~~~lvi~g~~l~~~~~~~~~~f~ 706 (1096)
++...+ .. . .. . . ...++.+..+...++.+.+.+.+.|.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~l~~~~~ 203 (301)
T 2b30_A 124 ISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFK 203 (301)
T ss_dssp HHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEEEECCCTTTHHHHHHHHHHHST
T ss_pred HHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchhhhccCCceEEEEECCHHHHHHHHHHHHHHhc
Confidence 222111 01 0 00 0 0 00001111112223333333333332
Q ss_pred -hhhhccceeEEEeeChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcccccc-
Q 001341 707 -ELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG- 778 (1096)
Q Consensus 707 -~l~~~~~~~i~~r~tP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~- 778 (1096)
.+....+...+.+++|. .|+..++.+.+ . .+.++++||+.||++|++.|++||+| |++...++..||+++.
T Consensus 204 ~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~~~k~~a~~v~~~ 282 (301)
T 2b30_A 204 NKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV-ANATDSAKSHAKCVLPV 282 (301)
T ss_dssp TTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC-TTCCHHHHHHSSEECSS
T ss_pred CCEEEEEeCCcceEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEE-cCCcHHHHhhCCEEEcc
Confidence 12222223345677777 69999988765 2 35799999999999999999999999 7777778889999887
Q ss_pred cc
Q 001341 779 KF 780 (1096)
Q Consensus 779 ~f 780 (1096)
+.
T Consensus 283 ~~ 284 (301)
T 2b30_A 283 SH 284 (301)
T ss_dssp CT
T ss_pred CC
Confidence 53
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.69 E-value=1.7e-08 Score=104.21 Aligned_cols=99 Identities=21% Similarity=0.204 Sum_probs=75.8
Q ss_pred HHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcChh
Q 001341 614 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWA 693 (1096)
Q Consensus 614 I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~ 693 (1096)
|+.|+++|+++.++||+....+..+++.+|+... +++.
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~--------~~~~---------------------------------- 92 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHY--------YKGQ---------------------------------- 92 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEE--------ECSC----------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccc--------eeCC----------------------------------
Confidence 9999999999999999999999999999998321 1000
Q ss_pred HHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhc
Q 001341 694 LEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 773 (1096)
Q Consensus 694 l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~a 773 (1096)
.-.|.-...+++.+.-..+.++++||+.||++|++.|++++++ ++....++..|
T Consensus 93 -------------------------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~~~~~a 146 (191)
T 3n1u_A 93 -------------------------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAV-SNAVPQVLEFA 146 (191)
T ss_dssp -------------------------SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHHHHHHS
T ss_pred -------------------------CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEe-CCccHHHHHhC
Confidence 0122223334444443456899999999999999999999999 66667778899
Q ss_pred ccccccc
Q 001341 774 DYSIGKF 780 (1096)
Q Consensus 774 D~vl~~f 780 (1096)
|+++.+.
T Consensus 147 d~v~~~~ 153 (191)
T 3n1u_A 147 DWRTERT 153 (191)
T ss_dssp SEECSSC
T ss_pred CEEecCC
Confidence 9999863
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.69 E-value=7.2e-08 Score=105.31 Aligned_cols=173 Identities=11% Similarity=0.137 Sum_probs=104.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCC-C--CC--------CCeEEEEcCCcHHHHHHHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EP--------KGQLLSIDGKTEDEVCRSLERVLL 673 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~-~--~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 673 (1096)
.+.+.+.++|++ +++|++++++|||....+..+...+|+.. + .. .++.+.....+.+.+.+.++.. .
T Consensus 19 ~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~-~ 96 (268)
T 1nf2_A 19 EISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYI-K 96 (268)
T ss_dssp CCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEEECCBCHHHHHHHHHHH-G
T ss_pred ccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCCEEEecCCCHHHHHHHHHHH-H
Confidence 466778899999 99999999999999999999999998743 1 00 1222222223333333322221 1
Q ss_pred Hccc------------cC-------------C---------------CCCcEEEEEcChhHHHHHHHHHHHHh-hhhhcc
Q 001341 674 TMRI------------TT-------------S---------------EPKDVAFVVDGWALEIALKHYRKAFT-ELAILS 712 (1096)
Q Consensus 674 ~~~~------------~~-------------~---------------~~~~~~lvi~g~~l~~~~~~~~~~f~-~l~~~~ 712 (1096)
.... .. . ...+..+..+...++.+.+.+.+.|. .+....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 176 (268)
T 1nf2_A 97 PLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFK 176 (268)
T ss_dssp GGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred hCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 1100 00 0 00011111111222222233333331 122222
Q ss_pred ceeEEEeeChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcccccccc
Q 001341 713 RTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 713 ~~~i~~r~tP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
....+.+++|. .|+..++.+.+ ..+.++++||+.||++|++.|++||+| |++..+++..||+++.+.
T Consensus 177 s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~~ 249 (268)
T 1nf2_A 177 SFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-ENAIEKVKEASDIVTLTN 249 (268)
T ss_dssp EETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-TTSCHHHHHHCSEECCCT
T ss_pred ecCceEEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe-cCCCHHHHhhCCEEEccC
Confidence 22335677776 79988888765 236799999999999999999999999 777777788899998653
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=8.2e-08 Score=96.30 Aligned_cols=97 Identities=20% Similarity=0.080 Sum_probs=76.1
Q ss_pred HHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcCh
Q 001341 613 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 692 (1096)
Q Consensus 613 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 692 (1096)
+++.|+++|+++.++||+....+..++..+|+...-
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~-------------------------------------------- 74 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLF-------------------------------------------- 74 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEE--------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEee--------------------------------------------
Confidence 899999999999999999999999999999983210
Q ss_pred hHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEecCCchHH
Q 001341 693 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 768 (1096)
Q Consensus 693 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 768 (1096)
.. ...|...++.+.+ ..+.++++||+.||++|.+.|++++++ ++....
T Consensus 75 -------------------------~~--~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~ 126 (164)
T 3e8m_A 75 -------------------------QG--VVDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP-ASAPFY 126 (164)
T ss_dssp -------------------------CS--CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECC-TTSCHH
T ss_pred -------------------------cc--cCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEc-CChHHH
Confidence 00 1334444443332 346899999999999999999999999 666667
Q ss_pred HHhhccccccccc
Q 001341 769 AARAADYSIGKFR 781 (1096)
Q Consensus 769 a~~~aD~vl~~f~ 781 (1096)
+++.||+++.+.+
T Consensus 127 ~~~~ad~v~~~~~ 139 (164)
T 3e8m_A 127 IRRLSTIFLEKRG 139 (164)
T ss_dssp HHTTCSSCCCCCT
T ss_pred HHHhCcEEeccCC
Confidence 7789999998733
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.59 E-value=3.5e-07 Score=100.98 Aligned_cols=64 Identities=25% Similarity=0.213 Sum_probs=52.9
Q ss_pred EEEeeChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcccccccc
Q 001341 716 ICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 716 i~~r~tP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
.+.+++|. +|+..++.+.+. .+.++++||+.||++|++.|++||+| +++..+++..||+++.+.
T Consensus 206 ~~lei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~~~~~~~~~~a~~v~~~~ 275 (288)
T 1nrw_A 206 HNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM-GNAREDIKSIADAVTLTN 275 (288)
T ss_dssp TEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC-TTCCHHHHHHCSEECCCG
T ss_pred CcEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEE-cCCCHHHHhhCceeecCC
Confidence 45677776 599888887752 35799999999999999999999999 777777888899998753
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.58 E-value=5.5e-08 Score=104.29 Aligned_cols=164 Identities=13% Similarity=0.151 Sum_probs=95.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHc-CCCCCCCCCeEEEEcCCc------H--HHHHH-HHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC-NFISPEPKGQLLSIDGKT------E--DEVCR-SLERVLLT 674 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~-gl~~~~~~~~~~~~~~~~------~--~~~~~-~~~~~~~~ 674 (1096)
.+.+.+.++|++|+++| +++++||+....+..+...+ .++. .+|..+..++.. . ..+.. ......+.
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~--~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 99 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMIC--YHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSW 99 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEE--GGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEE--ECCEEEeeCCeeeecccccccchhhHHHHHHHHHH
Confidence 56788999999999999 99999999999988877654 1111 112233333332 1 11111 11111111
Q ss_pred ccccCC---CCCcEEEEEcC--------hhHHHHHHHHHHHHhhhhhccceeEEEeeChh--hHHHHHHHHHhcCCeEEE
Q 001341 675 MRITTS---EPKDVAFVVDG--------WALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLA 741 (1096)
Q Consensus 675 ~~~~~~---~~~~~~lvi~g--------~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~--qK~~iV~~lk~~~~~v~~ 741 (1096)
...... ......+...- ..++.+.+.+.+. ..+. ......+.+++|. +|+..++.+.+.-. |++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~-~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via 176 (239)
T 1u02_A 100 VSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARI-FGVE-TYYGKMIIELRVPGVNKGSAIRSVRGERP-AII 176 (239)
T ss_dssp HHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHH-HTCE-EEECSSEEEEECTTCCHHHHHHHHHTTSC-EEE
T ss_pred HhhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhcc-CCcE-EEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEE
Confidence 110000 00001111100 1112222222221 2222 2233456788887 79999999987423 999
Q ss_pred EcCCccChhhhhhc--CeeEEecCCchHHHHhhccccccc
Q 001341 742 IGDGGNDVRMIQKA--DIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 742 iGDG~ND~~ml~~A--dvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
+||+.||.+||+.| ++||+| ||+ +..||+++.+
T Consensus 177 ~GD~~ND~~Ml~~a~~g~~vam-~Na----~~~A~~v~~~ 211 (239)
T 1u02_A 177 AGDDATDEAAFEANDDALTIKV-GEG----ETHAKFHVAD 211 (239)
T ss_dssp EESSHHHHHHHHTTTTSEEEEE-SSS----CCCCSEEESS
T ss_pred EeCCCccHHHHHHhhCCcEEEE-CCC----CCcceEEeCC
Confidence 99999999999999 999999 775 4688988765
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1.3e-07 Score=101.83 Aligned_cols=167 Identities=16% Similarity=0.243 Sum_probs=101.0
Q ss_pred ChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcH-------HHHHHH---------HHHHH
Q 001341 609 GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE-------DEVCRS---------LERVL 672 (1096)
Q Consensus 609 ~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~-------~~~~~~---------~~~~~ 672 (1096)
.+.++|++++ +|++++++|||....+..+..++++..++ .++..+|... .+.... +....
T Consensus 23 ~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~---~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (244)
T 1s2o_A 23 HLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPD---YWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIA 98 (244)
T ss_dssp HHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCS---EEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCCC---EEEECCCcEEEeCCCcChHHHHHHhccccHHHHHHHH
Confidence 4566777755 68999999999999999999998874321 1222232211 111111 11111
Q ss_pred HHccc---c---CCCCCcEEEEEcChhHHHHHHHHHHHHhh----hhhccceeEEEeeChh--hHHHHHHHHHhc----C
Q 001341 673 LTMRI---T---TSEPKDVAFVVDGWALEIALKHYRKAFTE----LAILSRTAICCRVTPS--QKAQLVELLKSC----D 736 (1096)
Q Consensus 673 ~~~~~---~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~~----l~~~~~~~i~~r~tP~--qK~~iV~~lk~~----~ 736 (1096)
..... . .....+..+..+........+.+.+.+.. +....+...+.+++|. .|+..++.+.+. .
T Consensus 99 ~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~ 178 (244)
T 1s2o_A 99 DGFEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEP 178 (244)
T ss_dssp HTCTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCG
T ss_pred HhccCccccCcccCCCeEEEEEeChhhHHHHHHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHhCCCH
Confidence 11110 0 11223444444443333333344444432 2111222346788887 699988888752 3
Q ss_pred CeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhh-------cccccccc
Q 001341 737 YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA-------ADYSIGKF 780 (1096)
Q Consensus 737 ~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~-------aD~vl~~f 780 (1096)
+.++++||+.||.+|++.|++||+| |++...++.. ||++..+.
T Consensus 179 ~~~~~~GD~~nD~~m~~~~g~~va~-~na~~~~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 179 SQTLVCGDSGNDIGLFETSARGVIV-RNAQPELLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp GGEEEEECSGGGHHHHTSSSEEEEC-TTCCHHHHHHHHHHCCTTEEECSSC
T ss_pred HHEEEECCchhhHHHHhccCcEEEE-cCCcHHHHHHHhcccccceeecCCc
Confidence 5799999999999999999999999 7877777774 78888653
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.55 E-value=1.4e-07 Score=101.74 Aligned_cols=166 Identities=13% Similarity=0.085 Sum_probs=97.2
Q ss_pred CChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCC---------------------eEEEEcCCcHHHH
Q 001341 608 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKG---------------------QLLSIDGKTEDEV 664 (1096)
Q Consensus 608 ~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~---------------------~~~~~~~~~~~~~ 664 (1096)
+.+.++|++|+++|++++++||+....+..+...+|+..+ ..+| +.+.....+.+.+
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~ 99 (249)
T 2zos_A 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKI 99 (249)
T ss_dssp GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCCC------CCCCCCEEECSCCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCcccccccccccCceEEEecCCCHHHH
Confidence 4499999999999999999999999999999998887321 0111 1222222333433
Q ss_pred HHHHHHHHHH-----cc------------ccCC-------CCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEee
Q 001341 665 CRSLERVLLT-----MR------------ITTS-------EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV 720 (1096)
Q Consensus 665 ~~~~~~~~~~-----~~------------~~~~-------~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~ 720 (1096)
.+.++...+. .. .... ......++..+..-. .+.+.+ + .+.... +.-+.++
T Consensus 100 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~-~-~~~~~~-s~~~~ei 174 (249)
T 2zos_A 100 REELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGW--EEVLVE-G-GFKVTM-GSRFYTV 174 (249)
T ss_dssp HHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEECSSSCH--HHHHHH-T-TCEEEE-CSSSEEE
T ss_pred HHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEecCCHHH--HHHHHh-C-CEEEEe-cCCeEEE
Confidence 3322221111 00 0000 001112222222111 111221 1 121111 1224566
Q ss_pred Ch-hhHHHHHHHHHhc-----CCeEEEEcCCccChhhhhhcCeeEEecCCch-HHHHhhccccccc
Q 001341 721 TP-SQKAQLVELLKSC-----DYRTLAIGDGGNDVRMIQKADIGVGISGREG-LQAARAADYSIGK 779 (1096)
Q Consensus 721 tP-~qK~~iV~~lk~~-----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~-~~a~~~aD~vl~~ 779 (1096)
+| ..|+..++.+.+. .+.|+++|||.||++|++.|++||+| |++. ..++..||+++.+
T Consensus 175 ~~g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~-gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 175 HGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV-GSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp ECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE-SSCCCTTEEEESSHHHHH
T ss_pred eCCCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEe-CCCCccccchhceEEecc
Confidence 76 2499888877642 35799999999999999999999999 7765 4466678988764
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.50 E-value=5.1e-07 Score=96.10 Aligned_cols=173 Identities=17% Similarity=0.211 Sum_probs=101.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCC--CCCeEEEEcCC-----cHHHHHHHHHHHHHHc-
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE--PKGQLLSIDGK-----TEDEVCRSLERVLLTM- 675 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~~~- 675 (1096)
..+.+.+.++|++++++|++++++||+....+..+...+|+..+- .++..+..++. ..+.+.+.++......
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 457788899999999999999999999999999999988873310 01111111111 1122322222221011
Q ss_pred cccCC-----CCCcEEEEEc-ChhHHHHHHHHHHHHhh-hhhccceeEEEeeChh--hHHHHHHHHHh----cCCeEEEE
Q 001341 676 RITTS-----EPKDVAFVVD-GWALEIALKHYRKAFTE-LAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAI 742 (1096)
Q Consensus 676 ~~~~~-----~~~~~~lvi~-g~~l~~~~~~~~~~f~~-l~~~~~~~i~~r~tP~--qK~~iV~~lk~----~~~~v~~i 742 (1096)
..... ...... +.+ +..-+. .+...+.+.. +... ....+.++.|. .|...++.+.+ ..+.++++
T Consensus 99 ~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~i 175 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLV-IMRETINVET-VREIINELNLNLVAV-DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHV 175 (231)
T ss_dssp TCCBCTTGGGCSSCEE-ECTTTSCHHH-HHHHHHHTTCSCEEE-ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEE
T ss_pred CceEEecCCCceeeEE-EECCCCCHHH-HHHHHHhcCCcEEEE-ecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEE
Confidence 10000 001122 222 111111 2222233321 1111 22234566665 68888887764 23579999
Q ss_pred cCCccChhhhhhcCeeEEecCCchHHHHhhcccccccc
Q 001341 743 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 743 GDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
||+.||++|++.|++|++| +++..+++..||+++.+.
T Consensus 176 GD~~nD~~~~~~ag~~v~~-~~~~~~~~~~a~~v~~~~ 212 (231)
T 1wr8_A 176 GDGENDLDAFKVVGYKVAV-AQAPKILKENADYVTKKE 212 (231)
T ss_dssp ECSGGGHHHHHHSSEEEEC-TTSCHHHHTTCSEECSSC
T ss_pred CCCHHHHHHHHHcCCeEEe-cCCCHHHHhhCCEEecCC
Confidence 9999999999999999999 776667777899998754
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=4.4e-07 Score=94.37 Aligned_cols=121 Identities=24% Similarity=0.285 Sum_probs=82.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.+++.++++.++++|+++.++||+....+..+...+|+...-.. .....
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------------- 126 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVK-------------------------- 126 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEE--------------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEe--eeEEE--------------------------
Confidence 35778999999999999999999999998888888888776210000 00000
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeC-hhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCee
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT-PSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIG 758 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~t-P~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvG 758 (1096)
++ .. ...+..+.. +..|...+..+.+ . .+.++++||+.||++|++.|+++
T Consensus 127 ------~~------------------~~-~~~~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~ 181 (211)
T 1l7m_A 127 ------DG------------------KL-TGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLK 181 (211)
T ss_dssp ------TT------------------EE-EEEEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEE
T ss_pred ------CC------------------EE-cCCcccCccCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCE
Confidence 00 00 000111112 3467766665543 2 35799999999999999999999
Q ss_pred EEecCCchHHHHhhccccccc
Q 001341 759 VGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 759 Iam~g~~~~~a~~~aD~vl~~ 779 (1096)
++| + .....+..||+++.+
T Consensus 182 ~~~-~-~~~~~~~~a~~v~~~ 200 (211)
T 1l7m_A 182 IAF-C-AKPILKEKADICIEK 200 (211)
T ss_dssp EEE-S-CCHHHHTTCSEEECS
T ss_pred EEE-C-CCHHHHhhcceeecc
Confidence 999 4 334566789999876
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.45 E-value=4.9e-07 Score=94.64 Aligned_cols=125 Identities=16% Similarity=0.206 Sum_probs=87.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.|++.+.++.|+++|+++.++|+.....+..+...+|+...-.. .+..+.
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~--~~~~~~------------------------- 126 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSN--TLIVEN------------------------- 126 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEET-------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccc--eeEEeC-------------------------
Confidence 46899999999999999999999999999999999999988321000 110000
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEee-ChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCee
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-TPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIG 758 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~-tP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvG 758 (1096)
| .....+...+ ....|..+++.+.+ ..+.++++||+.||++|.+.|+++
T Consensus 127 -------~-------------------~~~~~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~ 180 (217)
T 3m1y_A 127 -------D-------------------ALNGLVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIK 180 (217)
T ss_dssp -------T-------------------EEEEEEEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEE
T ss_pred -------C-------------------EEEeeeccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCe
Confidence 0 0000011111 23456666665543 346799999999999999999999
Q ss_pred EEecCCchHHHHhhccccccccchh
Q 001341 759 VGISGREGLQAARAADYSIGKFRFL 783 (1096)
Q Consensus 759 Iam~g~~~~~a~~~aD~vl~~f~~l 783 (1096)
++| +...+.+..||+++.+.++.
T Consensus 181 ~~~--~~~~~l~~~ad~v~~~~dl~ 203 (217)
T 3m1y_A 181 IAF--NAKEVLKQHATHCINEPDLA 203 (217)
T ss_dssp EEE--SCCHHHHTTCSEEECSSBGG
T ss_pred EEE--CccHHHHHhcceeecccCHH
Confidence 999 44556778999999865443
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.41 E-value=1e-07 Score=98.36 Aligned_cols=117 Identities=24% Similarity=0.335 Sum_probs=87.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.+.++.|++.|++++++||+....+..+ ..+|+... .. .+...
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~--~~~~~--------------------------- 127 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-AN--RAIFE--------------------------- 127 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EE--EEEEE---------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-ee--eEEee---------------------------
Confidence 7899999999999999999999999988877777 77776211 00 00000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 764 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 764 (1096)
++ ........|..|+..++.+ ..+.++++||+.||++|++.|++||+| ++
T Consensus 128 -----~~----------------------~~~~~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~-~~ 177 (201)
T 4ap9_A 128 -----DG----------------------KFQGIRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAV-GR 177 (201)
T ss_dssp -----TT----------------------EEEEEECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEE-SS
T ss_pred -----CC----------------------ceECCcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEE-CC
Confidence 00 0011455667899888888 557899999999999999999999999 55
Q ss_pred chHHHHhhccccccccchhhhH
Q 001341 765 EGLQAARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 765 ~~~~a~~~aD~vl~~f~~l~~l 786 (1096)
... .||+++.+++.+..+
T Consensus 178 ~~~----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 178 EIP----GADLLVKDLKELVDF 195 (201)
T ss_dssp CCT----TCSEEESSHHHHHHH
T ss_pred CCc----cccEEEccHHHHHHH
Confidence 543 889999887665554
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=4.7e-07 Score=93.11 Aligned_cols=96 Identities=17% Similarity=0.108 Sum_probs=73.6
Q ss_pred HHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcCh
Q 001341 613 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 692 (1096)
Q Consensus 613 ~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 692 (1096)
+|+.|+++|+++.++||+....+..+++.+|+... +.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~--------~~----------------------------------- 97 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL--------YQ----------------------------------- 97 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE--------EC-----------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee--------ec-----------------------------------
Confidence 89999999999999999999999999999987310 00
Q ss_pred hHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHH-hc---CCeEEEEcCCccChhhhhhcCeeEEecCCchHH
Q 001341 693 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLK-SC---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 768 (1096)
Q Consensus 693 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk-~~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 768 (1096)
. ...|...++.+. +. .+.+++|||+.||++|.+.|++++++ ++....
T Consensus 98 --------------------------~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~-~~~~~~ 148 (188)
T 2r8e_A 98 --------------------------G--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAV-ADAHPL 148 (188)
T ss_dssp --------------------------S--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSCTT
T ss_pred --------------------------C--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEe-cCcCHH
Confidence 0 123344444433 22 36799999999999999999999998 555455
Q ss_pred HHhhcccccccc
Q 001341 769 AARAADYSIGKF 780 (1096)
Q Consensus 769 a~~~aD~vl~~f 780 (1096)
++..||+++.+.
T Consensus 149 ~~~~ad~v~~~~ 160 (188)
T 2r8e_A 149 LIPRADYVTRIA 160 (188)
T ss_dssp TGGGSSEECSSC
T ss_pred HHhcCCEEEeCC
Confidence 666899999875
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.41 E-value=1.5e-06 Score=95.13 Aligned_cols=171 Identities=14% Similarity=0.202 Sum_probs=92.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCC-C--CCCCeEEEEcC--------------CcHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EPKGQLLSIDG--------------KTEDEVCRS 667 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~-~--~~~~~~~~~~~--------------~~~~~~~~~ 667 (1096)
.+.+.+.++|++|+++|++++++||+....+..+..++++.. + ..+|..+..++ .+.+.+...
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~i 105 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLV 105 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHHH
Confidence 456789999999999999999999999999999999998743 1 11222332121 112222222
Q ss_pred HHHHHHH--ccc--c----------------------CCCCCcEEEEEcC--hhHHHHHHHHHHHHhhhhhccceeEEEe
Q 001341 668 LERVLLT--MRI--T----------------------TSEPKDVAFVVDG--WALEIALKHYRKAFTELAILSRTAICCR 719 (1096)
Q Consensus 668 ~~~~~~~--~~~--~----------------------~~~~~~~~lvi~g--~~l~~~~~~~~~~f~~l~~~~~~~i~~r 719 (1096)
++...+. ... . ........+++.+ +.++.+.+.+.+ + .+... ....+.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~-~~~~~le 182 (275)
T 1xvi_A 106 LNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNE-L-GLQFM-QGARFWH 182 (275)
T ss_dssp HHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHH-T-TEEEE-ECSSCEE
T ss_pred HHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHh-h-CeEEE-ECCceEE
Confidence 2211110 000 0 0001112233322 222222222221 1 11111 1233567
Q ss_pred eChh--hHHHHHHHHHh-----cCCe--EEEEcCCccChhhhhhcCeeEEecCCch---HHHHhh--cc-ccccc
Q 001341 720 VTPS--QKAQLVELLKS-----CDYR--TLAIGDGGNDVRMIQKADIGVGISGREG---LQAARA--AD-YSIGK 779 (1096)
Q Consensus 720 ~tP~--qK~~iV~~lk~-----~~~~--v~~iGDG~ND~~ml~~AdvGIam~g~~~---~~a~~~--aD-~vl~~ 779 (1096)
++|. .|+..++.+.+ ..+. ++++||+.||.+|++.|++||+| |++. .+++.. || ++..+
T Consensus 183 I~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~n~~~~~~~~~~~~~a~~~v~~~ 256 (275)
T 1xvi_A 183 VLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIV-KGLNREGVHLHDEDPARVWRTQR 256 (275)
T ss_dssp EEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEEC-CCCC-------------------
T ss_pred EecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEe-cCCCccchhhccccCCceeEccC
Confidence 8887 69888776653 2345 99999999999999999999999 6654 445442 78 77754
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.32 E-value=7.3e-07 Score=93.05 Aligned_cols=132 Identities=19% Similarity=0.227 Sum_probs=86.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
.+.+++.+.++.|+++|+++.++||.....+..+....|+.... ++..
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~----~~~~---------------------------- 129 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN----IFAV---------------------------- 129 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG----EEEE----------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc----EEEe----------------------------
Confidence 37899999999999999999999999999999999999983211 1100
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHH-HhcCCeEEEEcCCccChhhhhh----cCeeE
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQK----ADIGV 759 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~l-k~~~~~v~~iGDG~ND~~ml~~----AdvGI 759 (1096)
.++.++.. ...........|..|.+.+... .-..+.++++||+.||++|+++ +.||+
T Consensus 130 -~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~ 191 (219)
T 3kd3_A 130 -ETIWNSDG-----------------SFKELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAY 191 (219)
T ss_dssp -EEEECTTS-----------------BEEEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEE
T ss_pred -eeeecCCC-----------------ceeccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEec
Confidence 00000000 0000111223445565555444 3356789999999999999976 33444
Q ss_pred EecCCchHHHHhhccccccccchhhhHH
Q 001341 760 GISGREGLQAARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 760 am~g~~~~~a~~~aD~vl~~f~~l~~ll 787 (1096)
++ ++.....+..||+++.++..+..++
T Consensus 192 ~~-~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 192 ME-HIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp CS-SCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred cC-ccccHHHHhhcceeeCCHHHHHHhh
Confidence 44 4555556678999998877766543
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.30 E-value=2.1e-06 Score=99.92 Aligned_cols=119 Identities=24% Similarity=0.324 Sum_probs=87.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+...-.. .+.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~--~l~----------------------------- 304 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAAN--ELE----------------------------- 304 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEE--CEE-----------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeee--eEE-----------------------------
Confidence 7999999999999999999999999999999999999998321000 000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEee-----ChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhc
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-----TPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKA 755 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~-----tP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~A 755 (1096)
+.+ ..+..+. .++.|..+++.+.+ . .+.++++|||.||++|++.|
T Consensus 305 ---~~d-----------------------g~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~a 358 (415)
T 3p96_A 305 ---IVD-----------------------GTLTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAA 358 (415)
T ss_dssp ---EET-----------------------TEEEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred ---EeC-----------------------CEEEeeEccCCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHC
Confidence 000 1122221 24567777766554 2 36799999999999999999
Q ss_pred CeeEEecCCchHHHHhhccccccccch
Q 001341 756 DIGVGISGREGLQAARAADYSIGKFRF 782 (1096)
Q Consensus 756 dvGIam~g~~~~~a~~~aD~vl~~f~~ 782 (1096)
++|+++ +....++..||+++...+.
T Consensus 359 G~~va~--~~~~~~~~~ad~~i~~~~l 383 (415)
T 3p96_A 359 GLGIAF--NAKPALREVADASLSHPYL 383 (415)
T ss_dssp SEEEEE--SCCHHHHHHCSEEECSSCT
T ss_pred CCeEEE--CCCHHHHHhCCEEEccCCH
Confidence 999999 3445577799999875444
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=2.1e-06 Score=92.96 Aligned_cols=164 Identities=16% Similarity=0.142 Sum_probs=93.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCCeEEE-------------------EcCCcHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-------------------IDGKTEDE 663 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~~~~~-------------------~~~~~~~~ 663 (1096)
.+.+.+.++|++++++|++++++||+....+. .+|+..+ ..++..+. ......+.
T Consensus 16 ~i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~----~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (259)
T 3zx4_A 16 GELGPAREALERLRALGVPVVPVTAKTRKEVE----ALGLEPPFIVENGGGLYLPRDWPVRAGRPKGGYRVVSLAWPYRK 91 (259)
T ss_dssp SSCSTTHHHHHHHHHTTCCEEEBCSSCHHHHH----HTTCCSSEEEGGGTEEEEETTCSSCCSEEETTEEEEECSCCHHH
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH----HcCCCCcEEEECCcEEEeCCCCcccccccCCceEEEEcCCCHHH
Confidence 67889999999999999999999999998877 6665321 00111111 12223333
Q ss_pred HHHHHHHHHHHccc-----c---------------------CCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEE
Q 001341 664 VCRSLERVLLTMRI-----T---------------------TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAIC 717 (1096)
Q Consensus 664 ~~~~~~~~~~~~~~-----~---------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~ 717 (1096)
+.+.++...+.... . ........+++....++.+.+.+.+. .+....... +
T Consensus 92 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~s~~-~ 168 (259)
T 3zx4_A 92 VRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVEAVLEALEAV--GLEWTHGGR-F 168 (259)
T ss_dssp HHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCCCTTTHHHHHHHHHHT--TCEEEECSS-S
T ss_pred HHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhccccceeEEeCcHHHHHHHHHHHHC--CcEEEecCc-e
Confidence 43333322211100 0 00111111221111233333333221 121111222 2
Q ss_pred EeeCh-hhHHHHHHHHHhc-C-----CeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 718 CRVTP-SQKAQLVELLKSC-D-----YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 718 ~r~tP-~qK~~iV~~lk~~-~-----~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
.++.| ..|+..++.+.+. | ..++++||+.||.+|++.|++||+| ||+.. + .++++..+
T Consensus 169 ~ei~~~~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~-~--~~~~~~~~ 233 (259)
T 3zx4_A 169 YHAAKGADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYV-GRGDP-P--EGVLATPA 233 (259)
T ss_dssp EEEESSCCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEEC-SSSCC-C--TTCEECSS
T ss_pred EEEcCCCCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEe-CChhh-c--CCcEEeCC
Confidence 25555 4899988887752 3 7799999999999999999999999 77655 3 67777654
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.29 E-value=1.2e-06 Score=95.03 Aligned_cols=64 Identities=31% Similarity=0.466 Sum_probs=51.2
Q ss_pred EeeChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccch
Q 001341 718 CRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 782 (1096)
Q Consensus 718 ~r~tP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~~ 782 (1096)
.++.|. .|+..++.+.+ ..+.++++||+.||++|++.|++|++| |+....++..||+++.+...
T Consensus 179 ~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~~~~ 248 (261)
T 2rbk_A 179 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVKAAADYVTAPIDE 248 (261)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCCGGG
T ss_pred EEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe-cCccHHHHhhCCEEeccCch
Confidence 345554 68888777654 236799999999999999999999999 77777788899999876554
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=5.6e-07 Score=93.52 Aligned_cols=130 Identities=18% Similarity=0.164 Sum_probs=87.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-....++
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~------------------------------ 119 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVL------------------------------ 119 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEE------------------------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEE------------------------------
Confidence 56799999999999999999999999999999888888873211000000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCe-eEEecC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGISG 763 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv-GIam~g 763 (1096)
+.......-.|.--..+.+.+.-..+.+++|||+.||+.|.+.|++ +|+| +
T Consensus 120 ---------------------------~~~~~~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v-~ 171 (205)
T 3m9l_A 120 ---------------------------GRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLV-N 171 (205)
T ss_dssp ---------------------------CTTTSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEC-S
T ss_pred ---------------------------eCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEE-e
Confidence 0000000001111122233332234679999999999999999999 9999 6
Q ss_pred CchHHHHhhccccccccchhhhHHHhhch
Q 001341 764 REGLQAARAADYSIGKFRFLKRLILVHGR 792 (1096)
Q Consensus 764 ~~~~~a~~~aD~vl~~f~~l~~lll~~GR 792 (1096)
+.....+..||+++.++..|...+=.+++
T Consensus 172 ~~~~~~~~~ad~v~~~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 172 LPDNPWPELTDWHARDCAQLRDLLSAEGH 200 (205)
T ss_dssp SSSCSCGGGCSEECSSHHHHHHHHHHTTC
T ss_pred CCCCcccccCCEEeCCHHHHHHHHHhccc
Confidence 65555666899999988777665433443
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.26 E-value=2.1e-06 Score=96.74 Aligned_cols=166 Identities=11% Similarity=0.112 Sum_probs=96.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCc------HHHHHHHHHHHHHHcccc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT------EDEVCRSLERVLLTMRIT 678 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 678 (1096)
++++++.++++.|++ |+.+.++||+....+..++..+++... ... .... .++..+.+-.. .
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~k~~~~~-~----- 169 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGE-----LHG-TEVDFDSIAVPEGLREELLSI-I----- 169 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSE-----EEE-EBCCGGGCCCCHHHHHHHHHH-H-----
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhh-----hcc-cccchhhhccccccceeEEec-C-----
Confidence 568999999999999 999999999987767777777776311 111 1000 01111100000 0
Q ss_pred CCCCCcEEEEEcChhHHHHH-HHHHHHHhhhhhccceeEEEe--eC--hhhHHHHHHHHHhcC--CeEEEEcCCccChhh
Q 001341 679 TSEPKDVAFVVDGWALEIAL-KHYRKAFTELAILSRTAICCR--VT--PSQKAQLVELLKSCD--YRTLAIGDGGNDVRM 751 (1096)
Q Consensus 679 ~~~~~~~~lvi~g~~l~~~~-~~~~~~f~~l~~~~~~~i~~r--~t--P~qK~~iV~~lk~~~--~~v~~iGDG~ND~~m 751 (1096)
...+.... +.+ +.+.++....+...+.+ .. +.+|+..++.+.... +.|+++|||.||++|
T Consensus 170 ------------~~~~~~~~~~~l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~m 236 (332)
T 1y8a_A 170 ------------DVIASLSGEELF-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKM 236 (332)
T ss_dssp ------------HHHHHCCHHHHH-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHH
T ss_pred ------------HHHHhhhhHHHH-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHH
Confidence 00000000 011 11111100000001111 22 457999888665432 459999999999999
Q ss_pred hhhc----CeeEEecCCchHHHHhhccccccccch------hhhHHHhhchhhhhhhhh
Q 001341 752 IQKA----DIGVGISGREGLQAARAADYSIGKFRF------LKRLILVHGRYSYNRTAF 800 (1096)
Q Consensus 752 l~~A----dvGIam~g~~~~~a~~~aD~vl~~f~~------l~~lll~~GR~~~~~i~~ 800 (1096)
++.| ++||+| ++...++..||+++.+.+. +..+ +..||..+ ++.+
T Consensus 237 l~~A~~~~g~~vam--na~~~lk~~Ad~v~~~~~~dGV~~~l~~~-~~~~~~~~-~~~~ 291 (332)
T 1y8a_A 237 FEAARGLGGVAIAF--NGNEYALKHADVVIISPTAMSEAKVIELF-MERKERAF-EVLS 291 (332)
T ss_dssp HHHHHHTTCEEEEE--SCCHHHHTTCSEEEECSSTHHHHHHHHHH-HHHGGGGG-GGGG
T ss_pred HHHHhhcCCeEEEe--cCCHHHHhhCcEEecCCCCCHHHHHHHHH-HHcCCchh-HHHH
Confidence 9999 999999 5566788899999875322 3333 46888877 5533
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.23 E-value=1.1e-06 Score=93.21 Aligned_cols=126 Identities=22% Similarity=0.190 Sum_probs=85.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
.++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.. ++
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~----------------------------- 151 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--IA----------------------------- 151 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE--EE-----------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee--EE-----------------------------
Confidence 45789999999999999999999999999988888888887432110 00
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCe---eEE
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI---GVG 760 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv---GIa 760 (1096)
.++. .-...-.|.--..+++.+.-..+.+++|||+.||+.|.+.|++ +|+
T Consensus 152 ------~~~~---------------------~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 204 (237)
T 4ex6_A 152 ------GDDS---------------------VERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVS 204 (237)
T ss_dssp ------CTTT---------------------SSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred ------eCCC---------------------CCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 0000 0000001111223334443345689999999999999999999 888
Q ss_pred ecCCchHHHHh-hccccccccchhhhHH
Q 001341 761 ISGREGLQAAR-AADYSIGKFRFLKRLI 787 (1096)
Q Consensus 761 m~g~~~~~a~~-~aD~vl~~f~~l~~ll 787 (1096)
+..+...+.+. .||+++.++..+..++
T Consensus 205 ~g~~~~~~~~~~~ad~v~~~~~el~~~l 232 (237)
T 4ex6_A 205 YGVSGPDELMRAGADTVVDSFPAAVTAV 232 (237)
T ss_dssp SSSSCHHHHHHTTCSEEESSHHHHHHHH
T ss_pred cCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 73244344555 7999999877776653
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.22 E-value=4e-06 Score=93.54 Aligned_cols=119 Identities=16% Similarity=0.225 Sum_probs=82.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.++++.|+++|+++.++||.....+..+++.+|+...-.. .+..++
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~--~l~~~d-------------------------- 230 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSN--TVEIRD-------------------------- 230 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--CEEEET--------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEE--EEEeeC--------------------------
Confidence 4899999999999999999999999999999999999998321000 000000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEe-eChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeE
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGV 759 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r-~tP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGI 759 (1096)
| .....+... ..++.|..+++.+.+ ..+.++++||+.||++|.+.|++|+
T Consensus 231 ------g-------------------~~tg~i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~v 285 (317)
T 4eze_A 231 ------N-------------------VLTDNITLPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGI 285 (317)
T ss_dssp ------T-------------------EEEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred ------C-------------------eeeeeEecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeE
Confidence 0 000000001 123456666555433 3467999999999999999999999
Q ss_pred EecCCchHHHHhhcccccc
Q 001341 760 GISGREGLQAARAADYSIG 778 (1096)
Q Consensus 760 am~g~~~~~a~~~aD~vl~ 778 (1096)
++ + .....+..||.++.
T Consensus 286 a~-~-~~~~~~~~a~~~i~ 302 (317)
T 4eze_A 286 AW-K-AKPVVREKIHHQIN 302 (317)
T ss_dssp EE-S-CCHHHHHHCCEEES
T ss_pred Ee-C-CCHHHHHhcCeeeC
Confidence 99 3 34446668888775
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.21 E-value=1.9e-06 Score=90.68 Aligned_cols=119 Identities=18% Similarity=0.235 Sum_probs=86.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 130 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD---------------------------------- 130 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee----------------------------------
Confidence 4678999999999999999999999999988888888888742111
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh--hhHHHHHHHHH----hcCCeEEEEcCCccChhhhhhcCe
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLK----SCDYRTLAIGDGGNDVRMIQKADI 757 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP--~qK~~iV~~lk----~~~~~v~~iGDG~ND~~ml~~Adv 757 (1096)
..++++..+ ..|...++.+. -..+.+++|||+.||+.|.+.|++
T Consensus 131 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~ 180 (226)
T 3mc1_A 131 ------------------------------AIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNL 180 (226)
T ss_dssp ------------------------------EEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTC
T ss_pred ------------------------------eeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCC
Confidence 122222222 22444444333 234689999999999999999999
Q ss_pred ---eEEecCCchHHH--HhhccccccccchhhhHH
Q 001341 758 ---GVGISGREGLQA--ARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 758 ---GIam~g~~~~~a--~~~aD~vl~~f~~l~~ll 787 (1096)
+|++ |+...+. +..||+++.++..+..++
T Consensus 181 ~~i~v~~-g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 181 PSIGVTY-GFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp CEEEESS-SSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred CEEEEcc-CCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 6666 5543333 358999999888877765
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=2.6e-06 Score=92.56 Aligned_cols=63 Identities=19% Similarity=0.264 Sum_probs=52.6
Q ss_pred EEEeeChh--hHHHHHHHHHh-cCCeEEEEcC----CccChhhhhhcC-eeEEecCCchHHHHhhccccccc
Q 001341 716 ICCRVTPS--QKAQLVELLKS-CDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 716 i~~r~tP~--qK~~iV~~lk~-~~~~v~~iGD----G~ND~~ml~~Ad-vGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
.+.+++|. .|+..++.+.. ..+.|+++|| |.||.+||+.|+ +|++| ||+...++..||++..+
T Consensus 187 ~~leI~~~~vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av-~NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 187 ISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFPE 257 (262)
T ss_dssp SCEEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCTT
T ss_pred cEEEEecCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe-cCCCHHHHHhhheeCCC
Confidence 35677776 59999999811 2468999999 999999999999 69999 99988899999998764
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=2e-06 Score=92.33 Aligned_cols=62 Identities=21% Similarity=0.224 Sum_probs=48.7
Q ss_pred cceeEEEeeChh--hHHHHHHHHHhcCCeEEEEcC----CccChhhhhhcC-eeEEecCCchHHHHhhcc
Q 001341 712 SRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAAD 774 (1096)
Q Consensus 712 ~~~~i~~r~tP~--qK~~iV~~lk~~~~~v~~iGD----G~ND~~ml~~Ad-vGIam~g~~~~~a~~~aD 774 (1096)
.+...+.+++|. .|+..++.|.+..+.|+++|| |.||.+||+.|+ +|++| ++..+.++..++
T Consensus 173 ~sg~~~leI~~~gv~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v-~n~~~~~~~~~~ 241 (246)
T 3f9r_A 173 IGGQISFDVFPVGWDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKV-TSYKDTIAEVEK 241 (246)
T ss_dssp EETTTEEEEEETTCSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEEC-SSHHHHHHHHHH
T ss_pred ecCCeEEEEEeCCCCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEe-CCHHHHHHHHHH
Confidence 334457788887 699999888776678999999 799999999996 89999 776555554444
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.17 E-value=3.2e-06 Score=84.32 Aligned_cols=105 Identities=18% Similarity=0.143 Sum_probs=77.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcE
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 685 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (1096)
+.+++.++|+.|+++|+++.++||+....+..+.+.+|+.. .+++
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------~~~~--------------------------- 81 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------IYTG--------------------------- 81 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE--------EEEC---------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh--------hccC---------------------------
Confidence 34667899999999999999999999999999999998721 1110
Q ss_pred EEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHH----HHHHhcCCeEEEEcCCccChhhhhhcCeeEEe
Q 001341 686 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV----ELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 761 (1096)
Q Consensus 686 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV----~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam 761 (1096)
+..|...+ +.+.-..+.++++||+.||++|.+.|++++++
T Consensus 82 ------------------------------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~ 125 (162)
T 2p9j_A 82 ------------------------------------SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAV 125 (162)
T ss_dssp ------------------------------------C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred ------------------------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEe
Confidence 11222222 22222346799999999999999999999988
Q ss_pred cCCchHHHHhhccccccccch
Q 001341 762 SGREGLQAARAADYSIGKFRF 782 (1096)
Q Consensus 762 ~g~~~~~a~~~aD~vl~~f~~ 782 (1096)
++........||+++.+...
T Consensus 126 -~~~~~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 126 -RNAVEEVRKVAVYITQRNGG 145 (162)
T ss_dssp -TTSCHHHHHHCSEECSSCSS
T ss_pred -cCccHHHHhhCCEEecCCCC
Confidence 45555566789999986543
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.16 E-value=4.1e-06 Score=87.72 Aligned_cols=118 Identities=11% Similarity=0.051 Sum_probs=81.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.+.++.+++.|++++++|+.....+.......|+...-.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~----------------------------------- 138 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD----------------------------------- 138 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCc-----------------------------------
Confidence 467999999999999999999999999888877777777632111
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeC------hhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCee
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT------PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 758 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~t------P~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 758 (1096)
..+++... |.--..+.+.+.-..+.+++|||+.||++|++.|+++
T Consensus 139 -----------------------------~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~ 189 (226)
T 1te2_A 139 -----------------------------ALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMR 189 (226)
T ss_dssp -----------------------------EEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred -----------------------------EEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCE
Confidence 01111111 1112233333333456799999999999999999999
Q ss_pred EEecCC---chHHHHhhccccccccchhhhH
Q 001341 759 VGISGR---EGLQAARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 759 Iam~g~---~~~~a~~~aD~vl~~f~~l~~l 786 (1096)
+++-.. .....+..||+++.++..+..-
T Consensus 190 ~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 190 SIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp EEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred EEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 988322 2223456799999887665443
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=1e-05 Score=79.54 Aligned_cols=141 Identities=16% Similarity=0.205 Sum_probs=89.5
Q ss_pred CCCCCCCCceEEEEEEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCCccHHH
Q 001341 374 KTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEA 453 (1096)
Q Consensus 374 KTGTLT~n~m~v~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~sp~e~A 453 (1096)
..||+|-|+..+..+...+. . +..+++...+.+. ..+++|...|
T Consensus 13 ~~~tit~gnr~vt~v~~~~g---------~--------------~e~elL~lAAs~E-------------~~SeHPla~A 56 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG---------V--------------DEKTLADAAQLAS-------------LADETPEGRS 56 (156)
T ss_dssp --------CEEEEEEEECTT---------S--------------CHHHHHHHHHHTT-------------SSCCSHHHHH
T ss_pred CCCceecCCCeEEEEEecCC---------C--------------CHHHHHHHHHHHh-------------CcCCCHHHHH
Confidence 46999999999999864210 0 1123444333332 1267999999
Q ss_pred HHHHHHhc-CeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhhhccC--C
Q 001341 454 LVHAAAQL-HMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--Q 530 (1096)
Q Consensus 454 l~~~a~~~-g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~~~~~--~ 530 (1096)
++++|++. |+...... .. .....+|++..++..+.+ +| .-+.+|+++.|...+... .
T Consensus 57 Iv~~A~~~~~l~~~~~~-----------~~---~~~~~~F~a~~G~~Gv~v----~G--~~v~vGn~~~i~~l~~~~gi~ 116 (156)
T 1svj_A 57 IVILAKQRFNLRERDVQ-----------SL---HATFVPFTAQSRMSGINI----DN--RMIRKGSVDAIRRHVEANGGH 116 (156)
T ss_dssp HHHHHHHHTTCCCCCHH-----------HH---TCEEEEEETTTTEEEEEE----TT--EEEEEEEHHHHHHHHHHHTCC
T ss_pred HHHHHHHhcCCCccccc-----------cc---ccceeeccccCCCCeEEE----CC--EEEEEeCcHHHHHHHHHcCCC
Confidence 99999986 65321000 00 012468888888777744 34 347799998877766532 2
Q ss_pred chHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccCCC
Q 001341 531 QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQD 608 (1096)
Q Consensus 531 ~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~lr~ 608 (1096)
.+..+.+.+++++.+|.+++++| .|..++|++++.|++||
T Consensus 117 ~~~~~~~~~~~la~~G~T~v~VA--------------------------------------~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 117 FPTDVDQKVDQVARQGATPLVVV--------------------------------------EGSRVLGVIALKDIVKG 156 (156)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEE--------------------------------------ETTEEEEEEEEEECCCC
T ss_pred CcHHHHHHHHHHHhCCCCEEEEE--------------------------------------ECCEEEEEEEEecCCCC
Confidence 23468888999999999999999 56789999999999996
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.12 E-value=5e-06 Score=87.96 Aligned_cols=118 Identities=16% Similarity=0.128 Sum_probs=74.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.+.++.|++.|+++.++|+... +..+...+|+...-.. + +.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~--i--~~--------------------------- 138 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA--I--VD--------------------------- 138 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE--E--CC---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE--E--ee---------------------------
Confidence 4789999999999999999999999754 6677778887432110 0 00
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 764 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 764 (1096)
++. .-...-.|.--..+.+.+.-..+.+++|||+.||+.|.+.|+++++| .+
T Consensus 139 ------~~~---------------------~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~ 190 (233)
T 3nas_A 139 ------PTT---------------------LAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVG-VG 190 (233)
T ss_dssp ------C------------------------------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEE-CC
T ss_pred ------Hhh---------------------CCCCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEE-EC
Confidence 000 00000011111234444443457899999999999999999999999 55
Q ss_pred chHHHHhhccccccccchhh
Q 001341 765 EGLQAARAADYSIGKFRFLK 784 (1096)
Q Consensus 765 ~~~~a~~~aD~vl~~f~~l~ 784 (1096)
...+.+ .||+++.++..+.
T Consensus 191 ~~~~~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 191 QGQPML-GADLVVRQTSDLT 209 (233)
T ss_dssp --------CSEECSSGGGCC
T ss_pred Cccccc-cCCEEeCChHhCC
Confidence 544444 8999998876655
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=98.09 E-value=5.6e-06 Score=88.92 Aligned_cols=60 Identities=18% Similarity=0.195 Sum_probs=48.5
Q ss_pred EEEeeChh--hHHHHHHHHHh-cCCeEEEEcC----CccChhhhhhcCe-eEEecCCchHHHHhhcccc
Q 001341 716 ICCRVTPS--QKAQLVELLKS-CDYRTLAIGD----GGNDVRMIQKADI-GVGISGREGLQAARAADYS 776 (1096)
Q Consensus 716 i~~r~tP~--qK~~iV~~lk~-~~~~v~~iGD----G~ND~~ml~~Adv-GIam~g~~~~~a~~~aD~v 776 (1096)
.+.+++|. +|+..++.+.. ..+.|+++|| |.||.+||+.|+. |++| ||+..++++.||||
T Consensus 178 ~~leI~~~~~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av-~Na~~~vk~~A~~v 245 (246)
T 2amy_A 178 ISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV-TAPEDTRRICELLF 245 (246)
T ss_dssp TEEEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC-SSHHHHHHHHHHHC
T ss_pred cEEEEecCCCchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEe-eCCCHHHHHHHhhc
Confidence 35677776 69988888811 2468999999 9999999999987 9999 89988899999987
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.04 E-value=4.2e-06 Score=89.08 Aligned_cols=119 Identities=16% Similarity=0.196 Sum_probs=84.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 154 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK---------------------------------- 154 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE----------------------------------
Confidence 4578999999999999999999999999988888888888743211
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh--hhHHHHHHH----HHhc-CCeEEEEcCCccChhhhhhcC
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVEL----LKSC-DYRTLAIGDGGNDVRMIQKAD 756 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP--~qK~~iV~~----lk~~-~~~v~~iGDG~ND~~ml~~Ad 756 (1096)
..++++..+ ..|..+++. +.-. .+.+++|||+.||+.|.+.|+
T Consensus 155 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG 204 (240)
T 3sd7_A 155 ------------------------------YIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIG 204 (240)
T ss_dssp ------------------------------EEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHT
T ss_pred ------------------------------EEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCC
Confidence 112222222 123333333 3334 568999999999999999999
Q ss_pred e---eEEecCCchHHHH--hhccccccccchhhhHH
Q 001341 757 I---GVGISGREGLQAA--RAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 757 v---GIam~g~~~~~a~--~~aD~vl~~f~~l~~ll 787 (1096)
+ +|++ |+...+.. ..||+++.++..+..++
T Consensus 205 ~~~i~v~~-g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 205 IDSIGVLY-GYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp CEEEEESS-SSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CCEEEEeC-CCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 9 5554 44333333 57899999888776654
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.02 E-value=2.3e-05 Score=81.22 Aligned_cols=123 Identities=23% Similarity=0.261 Sum_probs=87.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.++++.|+++ +++.++|+.....+..+...+|+...-.. .+....
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--~~~~~~-------------------------- 119 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDD-------------------------- 119 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEE--EEEECT--------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecc--eeEEcC--------------------------
Confidence 5789999999999999 99999999999999999999998421000 000000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEE--eeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEec
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC--RVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 762 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~--r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 762 (1096)
...... .-.|..|..+++.+...+..++++||+.||++|.+.|++++++
T Consensus 120 ----------------------------~~~~~~~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~- 170 (206)
T 1rku_A 120 ----------------------------SDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF- 170 (206)
T ss_dssp ----------------------------TSCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-
T ss_pred ----------------------------CceEEeeecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE-
Confidence 000111 1467789999998887778999999999999999999999998
Q ss_pred CCchHHHHhh-cccc-ccccchhhhH
Q 001341 763 GREGLQAARA-ADYS-IGKFRFLKRL 786 (1096)
Q Consensus 763 g~~~~~a~~~-aD~v-l~~f~~l~~l 786 (1096)
+. ..+.... .+++ +.++..+..+
T Consensus 171 ~~-~~~~~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 171 HA-PENVIREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp SC-CHHHHHHCTTSCEECSHHHHHHH
T ss_pred CC-cHHHHHHHhhhccccchHHHHHH
Confidence 33 3345554 4554 5555544443
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.00 E-value=6.3e-06 Score=86.23 Aligned_cols=123 Identities=15% Similarity=0.095 Sum_probs=78.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
.+.+++.+.++.+++.|+++.++|+.....+.......|+...-.. ++..+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------------------------- 139 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDI--IIGGE--------------------------- 139 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSE--EECGG---------------------------
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheee--eeehh---------------------------
Confidence 3468999999999999999999999998888888888876432110 00000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChh--hHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEec
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 762 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~--qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 762 (1096)
. ...-.|. --..+.+.+.-..+.++++||+.||++|++.|++++++-
T Consensus 140 --------~-----------------------~~~~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~ 188 (225)
T 3d6j_A 140 --------D-----------------------VTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGV 188 (225)
T ss_dssp --------G-----------------------CSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred --------h-----------------------cCCCCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 0 0000111 111222332223467999999999999999999998762
Q ss_pred CC---chHHHHhh-ccccccccchhhhHH
Q 001341 763 GR---EGLQAARA-ADYSIGKFRFLKRLI 787 (1096)
Q Consensus 763 g~---~~~~a~~~-aD~vl~~f~~l~~ll 787 (1096)
++ ...+.+.. ||+++.+.+.+..++
T Consensus 189 ~~~~~~~~~l~~~~ad~v~~~~~el~~~l 217 (225)
T 3d6j_A 189 TSGMTTAQEFQAYPYDRIISTLGQLISVP 217 (225)
T ss_dssp TTSSCCTTGGGGSCCSEEESSGGGGC---
T ss_pred CCCCCChHHHhhcCCCEEECCHHHHHHhh
Confidence 32 22333443 899998877665543
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.00 E-value=6.7e-06 Score=86.70 Aligned_cols=120 Identities=18% Similarity=0.061 Sum_probs=83.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.. ++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~----------------------------- 138 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN--IV----------------------------- 138 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC--EE-----------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe--ee-----------------------------
Confidence 45789999999999999999999999999999999888887432111 10
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh--hhHHHHHHHH-Hh---cCCeEEEEcCCccChhhhhhcCe
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELL-KS---CDYRTLAIGDGGNDVRMIQKADI 757 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP--~qK~~iV~~l-k~---~~~~v~~iGDG~ND~~ml~~Adv 757 (1096)
+++..+ .-|..+++.+ +. ..+.+++|||+.||+.|.+.|++
T Consensus 139 ---------------------------------~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~ 185 (233)
T 3s6j_A 139 ---------------------------------TRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKA 185 (233)
T ss_dssp ---------------------------------CGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTC
T ss_pred ---------------------------------ccccCCCCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCC
Confidence 001111 1122333322 22 34679999999999999999999
Q ss_pred ---eEEecCCchHHHHh-hccccccccchhhhHH
Q 001341 758 ---GVGISGREGLQAAR-AADYSIGKFRFLKRLI 787 (1096)
Q Consensus 758 ---GIam~g~~~~~a~~-~aD~vl~~f~~l~~ll 787 (1096)
+|++..+...+.+. .||+++.++..+..++
T Consensus 186 ~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 186 TGVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp EEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred EEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 44443344555555 3999999888777664
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.00 E-value=5.6e-06 Score=85.18 Aligned_cols=118 Identities=18% Similarity=0.189 Sum_probs=77.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
.+.+++.+.++.+++.|++++++|+....... .....|+...-. .
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~---~------------------------------- 129 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT---E------------------------------- 129 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE---E-------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee---e-------------------------------
Confidence 46899999999999999999999999877776 666666522100 0
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCee-EEecC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGISG 763 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG-Iam~g 763 (1096)
++.+.. .-...-.|.--..+.+.+.-..+.++++||+.||++|++.|+++ |+| +
T Consensus 130 ---~~~~~~---------------------~~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~-~ 184 (207)
T 2go7_A 130 ---ILTSQS---------------------GFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF-L 184 (207)
T ss_dssp ---EECGGG---------------------CCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEES-S
T ss_pred ---EEecCc---------------------CCCCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEE-e
Confidence 000000 00000011112234444443456799999999999999999998 677 5
Q ss_pred CchHHHHhhccccccccchhhhH
Q 001341 764 REGLQAARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 764 ~~~~~a~~~aD~vl~~f~~l~~l 786 (1096)
+.. + .||+++.++..+..+
T Consensus 185 ~~~-~---~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 185 EST-Y---EGNHRIQALADISRI 203 (207)
T ss_dssp CCS-C---TTEEECSSTTHHHHH
T ss_pred cCC-C---CCCEEeCCHHHHHHH
Confidence 543 3 689998887666543
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=97.99 E-value=1.3e-05 Score=84.36 Aligned_cols=128 Identities=20% Similarity=0.312 Sum_probs=86.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.|++.++++.|+++|++++++||.....+..+.+.+|+.... .+...
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~----~f~~~-------------------------- 134 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN----VFANR-------------------------- 134 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG----EEEEC--------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc----EEeee--------------------------
Confidence 368999999999999999999999999999999999999984210 11000
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEE-Eee-----ChhhHHHHHHHHHh-cC-CeEEEEcCCccChhhhhhc
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRV-----TPSQKAQLVELLKS-CD-YRTLAIGDGGNDVRMIQKA 755 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~-~r~-----tP~qK~~iV~~lk~-~~-~~v~~iGDG~ND~~ml~~A 755 (1096)
+..+ ....+. .+. .+..|..+++.+.+ .| +.++++||+.||+.|.+.|
T Consensus 135 ---~~~~---------------------~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~a 190 (225)
T 1nnl_A 135 ---LKFY---------------------FNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPA 190 (225)
T ss_dssp ---EEEC---------------------TTSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTS
T ss_pred ---EEEc---------------------CCCcEecCCCCCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhC
Confidence 0000 000011 111 12356666665543 33 6799999999999999999
Q ss_pred CeeEEecCCc-hHHHHhhccccccccchhhh
Q 001341 756 DIGVGISGRE-GLQAARAADYSIGKFRFLKR 785 (1096)
Q Consensus 756 dvGIam~g~~-~~~a~~~aD~vl~~f~~l~~ 785 (1096)
+++|++.... .......+|+++.++..+..
T Consensus 191 g~~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 221 (225)
T 1nnl_A 191 DAFIGFGGNVIRQQVKDNAKWYITDFVELLG 221 (225)
T ss_dssp SEEEEECSSCCCHHHHHHCSEEESCGGGGCC
T ss_pred CeEEEecCccccHHHHhcCCeeecCHHHHHH
Confidence 9988883221 22334468999988766544
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.98 E-value=8.2e-06 Score=88.37 Aligned_cols=41 Identities=27% Similarity=0.315 Sum_probs=35.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 644 (1096)
.++.+++.+.++.|++.|+++.++|++....+..+...+|+
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 35679999999999999999999999988877777776665
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.95 E-value=5.3e-06 Score=86.69 Aligned_cols=116 Identities=8% Similarity=0.023 Sum_probs=76.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.+.++.+++.|+++.++|++ ..+..+...+|+...-. .+ +.+..
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~---~~-~~~~~------------------------ 140 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFD---AI-ADPAE------------------------ 140 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCS---EE-CCTTT------------------------
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcc---eE-ecccc------------------------
Confidence 57899999999999999999999998 44555666677632110 00 00000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEec
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 762 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 762 (1096)
.....| .--..+.+.+.-..+.++++||+.||++|++.|+++++|
T Consensus 141 --------------------------------~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~- 187 (221)
T 2wf7_A 141 --------------------------------VAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIG- 187 (221)
T ss_dssp --------------------------------SSSCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE-
T ss_pred --------------------------------CCCCCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEE-
Confidence 000011 111223333332346799999999999999999999999
Q ss_pred CCchHHHHhhccccccccchhh
Q 001341 763 GREGLQAARAADYSIGKFRFLK 784 (1096)
Q Consensus 763 g~~~~~a~~~aD~vl~~f~~l~ 784 (1096)
++...+.+ .||+++.++..+.
T Consensus 188 ~~~~~~~~-~a~~v~~~~~el~ 208 (221)
T 2wf7_A 188 VGRPEDLG-DDIVIVPDTSHYT 208 (221)
T ss_dssp ESCHHHHC-SSSEEESSGGGCC
T ss_pred ECCHHHhc-cccchhcCHHhCC
Confidence 55555555 8999998766654
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.92 E-value=9.2e-06 Score=84.11 Aligned_cols=123 Identities=12% Similarity=0.064 Sum_probs=81.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.+.++.|++.|++++++|+.....+....+..|+...-.. ++..+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~--------------------------- 139 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI--VLSGE--------------------------- 139 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGG---------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee--Eeecc---------------------------
Confidence 5789999999999999999999999999999999988887432110 11000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 764 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 764 (1096)
. .....-.|.--..+.+.+.-..+.+++|||+.||+.|.+.|++++.+...
T Consensus 140 --------~---------------------~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 190 (214)
T 3e58_A 140 --------E---------------------FKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRD 190 (214)
T ss_dssp --------G---------------------CSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECC
T ss_pred --------c---------------------ccCCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECC
Confidence 0 00000011112233444433457799999999999999999998877333
Q ss_pred chH-HHHhhccccccccchhhh
Q 001341 765 EGL-QAARAADYSIGKFRFLKR 785 (1096)
Q Consensus 765 ~~~-~a~~~aD~vl~~f~~l~~ 785 (1096)
.+. .....+|+++.++..+..
T Consensus 191 ~~~~~~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 191 NEFGMDQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp SSSCCCCTTSSEEESSGGGGGG
T ss_pred CCccchhccHHHHHHHHHHHHh
Confidence 211 122578999988766654
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.1e-05 Score=91.90 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=39.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
.++.|++++.|+.|+++|++|+|+||.....+..+|.++|+.
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~ 261 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNN 261 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcc
Confidence 357899999999999999999999999999999999999874
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.91 E-value=3.7e-05 Score=81.20 Aligned_cols=105 Identities=16% Similarity=0.084 Sum_probs=73.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+.. ++...
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~------~~~~~--------------------------- 138 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH------LIATD--------------------------- 138 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE------EEECE---------------------------
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE------EEEcc---------------------------
Confidence 579999999999999999999999999999999999999831 11000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEE-EeeChhhHHHHHHHHH-hcC------CeEEEEcCCccChhhhhhcC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLK-SCD------YRTLAIGDGGNDVRMIQKAD 756 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~-~r~tP~qK~~iV~~lk-~~~------~~v~~iGDG~ND~~ml~~Ad 756 (1096)
....+| .....+. ....+..|...++.+. +.| +.++++||+.||++|++.|+
T Consensus 139 -~~~~~~-------------------~~~g~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag 198 (232)
T 3fvv_A 139 -PEYRDG-------------------RYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVT 198 (232)
T ss_dssp -EEEETT-------------------EEEEEEESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSS
T ss_pred -eEEECC-------------------EEeeeecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCC
Confidence 000000 0000000 0122356776665543 344 57999999999999999999
Q ss_pred eeEEec
Q 001341 757 IGVGIS 762 (1096)
Q Consensus 757 vGIam~ 762 (1096)
+++++.
T Consensus 199 ~~~~~~ 204 (232)
T 3fvv_A 199 RPIAAN 204 (232)
T ss_dssp EEEEES
T ss_pred CeEEEC
Confidence 999993
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.91 E-value=1.3e-05 Score=86.98 Aligned_cols=120 Identities=18% Similarity=0.143 Sum_probs=81.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...... .+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~--~~------------------------------ 158 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPA--ST------------------------------ 158 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCS--EE------------------------------
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCc--eE------------------------------
Confidence 6789999999999999999999999998888888777776432101 10
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChh--hHH----HHHHHHHhcC-CeEEEEcCCccChhhhhhcCe
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKA----QLVELLKSCD-YRTLAIGDGGNDVRMIQKADI 757 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~--qK~----~iV~~lk~~~-~~v~~iGDG~ND~~ml~~Adv 757 (1096)
+++...+. -|. .+.+.+.-.. +.+++|||+.||+.|.+.|++
T Consensus 159 -------------------------------~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~ 207 (277)
T 3iru_A 159 -------------------------------VFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGM 207 (277)
T ss_dssp -------------------------------ECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTC
T ss_pred -------------------------------ecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCC
Confidence 01111111 122 3334444345 789999999999999999995
Q ss_pred ---eEEecCC-----------------------chHHHHh-hccccccccchhhhHH
Q 001341 758 ---GVGISGR-----------------------EGLQAAR-AADYSIGKFRFLKRLI 787 (1096)
Q Consensus 758 ---GIam~g~-----------------------~~~~a~~-~aD~vl~~f~~l~~ll 787 (1096)
+|++.+. ...+.+. .+|+++.++..|..++
T Consensus 208 ~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 264 (277)
T 3iru_A 208 WTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVI 264 (277)
T ss_dssp EEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHH
T ss_pred eEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHH
Confidence 5555221 2233444 4899999988877664
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=1.8e-05 Score=83.59 Aligned_cols=121 Identities=15% Similarity=0.113 Sum_probs=79.1
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 605 RLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
++.+++.+.++.|++. |+++.++|+.....+.......|+...-.. ++ .+.+
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~--~~~~----------------------- 145 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF--GA--FADD----------------------- 145 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC--EE--CTTT-----------------------
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCc--ce--ecCC-----------------------
Confidence 4679999999999999 999999999999888888888887432110 00 0000
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHH----HHHHH--hcCCeEEEEcCCccChhhhhhcCe
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQL----VELLK--SCDYRTLAIGDGGNDVRMIQKADI 757 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~i----V~~lk--~~~~~v~~iGDG~ND~~ml~~Adv 757 (1096)
+ ...|.-+..+ .+.+. -..+.+++|||+.||++|.+.|++
T Consensus 146 --------------------------------~--~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~ 191 (234)
T 2hcf_A 146 --------------------------------A--LDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDA 191 (234)
T ss_dssp --------------------------------C--SSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTC
T ss_pred --------------------------------C--cCccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCC
Confidence 0 0001111222 23332 233679999999999999999995
Q ss_pred e---EEecCCchHHHHh--hccccccccchhhhHH
Q 001341 758 G---VGISGREGLQAAR--AADYSIGKFRFLKRLI 787 (1096)
Q Consensus 758 G---Iam~g~~~~~a~~--~aD~vl~~f~~l~~ll 787 (1096)
+ |+. |....+... .+|+++.++..+..++
T Consensus 192 ~~i~v~~-~~~~~~~~~~~~a~~v~~~~~el~~~l 225 (234)
T 2hcf_A 192 RSIAVAT-GNFTMEELARHKPGTLFKNFAETDEVL 225 (234)
T ss_dssp EEEEECC-SSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred cEEEEcC-CCCCHHHHHhCCCCEEeCCHHhHHHHH
Confidence 5 333 333333333 3899998877776654
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.83 E-value=1.3e-05 Score=85.76 Aligned_cols=122 Identities=20% Similarity=0.284 Sum_probs=80.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
.++.+++.++++.|++.|++++++|+.....+..+...+|+...-. .+ +.+..
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~---~~-~~~~~----------------------- 165 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS---EM-LGGQS----------------------- 165 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS---EE-ECTTT-----------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEE---EE-Eeccc-----------------------
Confidence 4678999999999999999999999999998999999998742111 00 00000
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeE-E
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-G 760 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-a 760 (1096)
+.+..| .--..+++.+.-..+.+++|||+.||++|.+.|++++ +
T Consensus 166 ---------------------------------~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~ 212 (243)
T 2hsz_A 166 ---------------------------------LPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVG 212 (243)
T ss_dssp ---------------------------------SSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred ---------------------------------CCCCCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEE
Confidence 001112 2222344444434567999999999999999999995 4
Q ss_pred ec-CCc-hHH-HHhhccccccccchhhh
Q 001341 761 IS-GRE-GLQ-AARAADYSIGKFRFLKR 785 (1096)
Q Consensus 761 m~-g~~-~~~-a~~~aD~vl~~f~~l~~ 785 (1096)
+. |.. ..+ ....+|+++.++..+..
T Consensus 213 v~~g~~~~~~~~~~~ad~vi~~~~el~~ 240 (243)
T 2hsz_A 213 LTYGYNYNIPIAQSKPDWIFDDFADILK 240 (243)
T ss_dssp ESSSCSTTCCGGGGCCSEEESSGGGGGG
T ss_pred EcCCCCchhhhhhCCCCEEECCHHHHHH
Confidence 42 211 111 24468999887665544
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.83 E-value=3.1e-05 Score=81.63 Aligned_cols=116 Identities=17% Similarity=0.155 Sum_probs=79.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~---------------------------------- 147 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD---------------------------------- 147 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhee----------------------------------
Confidence 3578999999999999999999999999998888888888742211
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhH------HHHHHHHHhcCC-eEEEEcCCccChhhhhhcC
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDY-RTLAIGDGGNDVRMIQKAD 756 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK------~~iV~~lk~~~~-~v~~iGDG~ND~~ml~~Ad 756 (1096)
..++++-.+..| ..+.+.+.-..+ .+++|||+.||+.|.+.|+
T Consensus 148 ------------------------------~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG 197 (231)
T 3kzx_A 148 ------------------------------SIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAG 197 (231)
T ss_dssp ------------------------------EEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTT
T ss_pred ------------------------------eEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCC
Confidence 111111111112 233344433445 7999999999999999999
Q ss_pred e-eEEecCCchHHHHhhccccccccchhhhHH
Q 001341 757 I-GVGISGREGLQAARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 757 v-GIam~g~~~~~a~~~aD~vl~~f~~l~~ll 787 (1096)
+ +|.+ ++... ..+|+++.+++.+..++
T Consensus 198 ~~~v~~-~~~~~---~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 198 CLPIKY-GSTNI---IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp CEEEEE-CC--------CCEEESSHHHHHHHH
T ss_pred CeEEEE-CCCCC---CCCceeeCCHHHHHHHH
Confidence 7 5566 55432 46788888877776653
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.82 E-value=2.1e-05 Score=79.65 Aligned_cols=59 Identities=15% Similarity=0.062 Sum_probs=41.5
Q ss_pred HHHHHhcCCeEEEEcCCccChhhhhhcCe---eEEecCCchHHHH----hhccccccccchhhhHHH
Q 001341 729 VELLKSCDYRTLAIGDGGNDVRMIQKADI---GVGISGREGLQAA----RAADYSIGKFRFLKRLIL 788 (1096)
Q Consensus 729 V~~lk~~~~~v~~iGDG~ND~~ml~~Adv---GIam~g~~~~~a~----~~aD~vl~~f~~l~~lll 788 (1096)
.+.+.-..+.+++|||+.||+.|.+.|++ +|.. |....+.. ..+|+++.++..+..+++
T Consensus 111 ~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 111 ARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQT-GNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp HHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEEST-TTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECC-CCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 33333345779999999999999999996 4444 54443333 357999999877776653
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=1.4e-05 Score=87.37 Aligned_cols=123 Identities=15% Similarity=0.122 Sum_probs=82.3
Q ss_pred cCCCChHHHHHHHHHcCC--eEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCC
Q 001341 605 RLQDGVPETIETLRKAGI--NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 682 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGI--kv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1096)
++.+++.++++.|++.|+ +++++|+.....+......+|+...-.. ++..+...
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~--v~~~~~~~---------------------- 197 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDG--LTYCDYSR---------------------- 197 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSE--EECCCCSS----------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccce--EEEeccCC----------------------
Confidence 567899999999999999 9999999999988888888888432111 11000000
Q ss_pred CcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHH----HHhcC-CeEEEEcCCccChhhhhhcCe
Q 001341 683 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVEL----LKSCD-YRTLAIGDGGNDVRMIQKADI 757 (1096)
Q Consensus 683 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~----lk~~~-~~v~~iGDG~ND~~ml~~Adv 757 (1096)
.. ...+.-|..+++. +.-.. +.+++|||+.||+.|.+.|++
T Consensus 198 -------------------------------~~---~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~ 243 (282)
T 3nuq_A 198 -------------------------------TD---TLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGM 243 (282)
T ss_dssp -------------------------------CS---SCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTC
T ss_pred -------------------------------Cc---ccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCC
Confidence 00 0112223333333 33344 789999999999999999999
Q ss_pred eEEecCCchHHH------HhhccccccccchhhhH
Q 001341 758 GVGISGREGLQA------ARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 758 GIam~g~~~~~a------~~~aD~vl~~f~~l~~l 786 (1096)
|++| ++..... ...||+++.++..+..+
T Consensus 244 ~~~~-~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 244 KTCI-HLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp SEEE-EECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred eEEE-EEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 8877 3322111 23789999887776654
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00012 Score=80.42 Aligned_cols=65 Identities=25% Similarity=0.314 Sum_probs=52.4
Q ss_pred EEEeeChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccc
Q 001341 716 ICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 781 (1096)
Q Consensus 716 i~~r~tP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~ 781 (1096)
.+.++.|. .|...++.+.+ . .+.++++||+.||++|++.|++|++| |+.....+..||+++.+..
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~-~~~~~~~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL-KNATQEAKNLHNLITDSEY 271 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC-TTCCHHHHHHCCCBCSSCH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE-CCccHHHHHhCCEEcCCCC
Confidence 56666665 68887776654 2 35799999999999999999999999 7777778889999887543
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.79 E-value=1.7e-05 Score=83.40 Aligned_cols=120 Identities=13% Similarity=0.058 Sum_probs=82.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-.
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 140 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD---------------------------------- 140 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc----------------------------------
Confidence 4678999999999999999999999999888888888888742211
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhh--HH----HHHHHHHhcCCeEEEEcCCccChhhhhhcCe
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--KA----QLVELLKSCDYRTLAIGDGGNDVRMIQKADI 757 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~q--K~----~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv 757 (1096)
..++++..+.. |. .+.+.+.-..+.+++|||+.||+.|.+.|++
T Consensus 141 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~ 190 (230)
T 3um9_A 141 ------------------------------HLISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGY 190 (230)
T ss_dssp ------------------------------EEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTC
T ss_pred ------------------------------eeEehhhcccCCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCC
Confidence 11111111111 12 2333333344679999999999999999999
Q ss_pred eEEecC---CchHHHHhhccccccccchhhhHH
Q 001341 758 GVGISG---REGLQAARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 758 GIam~g---~~~~~a~~~aD~vl~~f~~l~~ll 787 (1096)
++++.. +.....+..+|+++.++..+..++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (230)
T 3um9_A 191 PVCWINRSNGVFDQLGVVPDIVVSDVGVLASRF 223 (230)
T ss_dssp CEEEECTTSCCCCCSSCCCSEEESSHHHHHHTC
T ss_pred EEEEEeCCCCccccccCCCcEEeCCHHHHHHHH
Confidence 998822 222223347899998877766543
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.76 E-value=1.8e-05 Score=83.26 Aligned_cols=125 Identities=18% Similarity=0.245 Sum_probs=82.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.|++.++++.|++.|+++.++|+.....+..+...+|+...-. .+. .+.+
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~---~i~-~~~~----------------------- 134 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFD---LIV-GGDT----------------------- 134 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS---EEE-CTTS-----------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHhe---EEE-ecCc-----------------------
Confidence 4678999999999999999999999999988888888888732111 000 0000
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCee-EEec
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGIS 762 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG-Iam~ 762 (1096)
.....-.|.--..+++.+.-..+.+++|||+.||++|.+.|+++ |++.
T Consensus 135 -------------------------------~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 183 (222)
T 2nyv_A 135 -------------------------------FGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALAL 183 (222)
T ss_dssp -------------------------------SCTTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEET
T ss_pred -------------------------------CCCCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEc
Confidence 00001112222334444433456799999999999999999998 6662
Q ss_pred -CCchHHHHhhccccccccchhhhHH
Q 001341 763 -GREGLQAARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 763 -g~~~~~a~~~aD~vl~~f~~l~~ll 787 (1096)
|....+. ..+|+++.++..+..++
T Consensus 184 ~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 184 WGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp TSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred CCCCCccc-cCCCEEECCHHHHHHHH
Confidence 2222112 56899988877766544
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.71 E-value=6.6e-05 Score=79.81 Aligned_cols=138 Identities=12% Similarity=0.175 Sum_probs=87.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.|++.++|+.|+++|+++.++|+.....+..+.. |+... . .++.-+.... ..
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~--~v~~~~~~~~--------------------~~ 130 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-D--RIYCNHASFD--------------------ND 130 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-G--GEEEEEEECS--------------------SS
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-C--eEEeeeeEEc--------------------CC
Confidence 3689999999999999999999999999888887777 66432 1 1222110000 00
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecC
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 763 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g 763 (1096)
.+.... .......+.+-...+|..+++.+....+.+++|||+.||++|.+.|++.++..+
T Consensus 131 ~~~~~~--------------------~kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~ 190 (236)
T 2fea_A 131 YIHIDW--------------------PHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 190 (236)
T ss_dssp BCEEEC--------------------TTCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHH
T ss_pred ceEEec--------------------CCCCccccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechH
Confidence 000000 000000011112457888888887667889999999999999999999886422
Q ss_pred CchHHHHhh--ccccccccchhhhHH
Q 001341 764 REGLQAARA--ADYSIGKFRFLKRLI 787 (1096)
Q Consensus 764 ~~~~~a~~~--aD~vl~~f~~l~~ll 787 (1096)
........ +|+++.++..+..++
T Consensus 191 -~~~~~~~~~~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 191 -LLNECREQNLNHLPYQDFYEIRKEI 215 (236)
T ss_dssp -HHHHHHHTTCCEECCSSHHHHHHHH
T ss_pred -HHHHHHHCCCCeeecCCHHHHHHHH
Confidence 12223232 788888777665543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00013 Score=77.64 Aligned_cols=119 Identities=14% Similarity=0.174 Sum_probs=79.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.++++.|++.|+++.++|+.....+..+...+|+...-.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~----------------------------------- 138 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFE----------------------------------- 138 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhcc-----------------------------------
Confidence 478999999999999999999999998888888888888732111
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhh--H----HHHHHHHHhcCCeEEEEcCCc-cChhhhhhcCe
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--K----AQLVELLKSCDYRTLAIGDGG-NDVRMIQKADI 757 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~q--K----~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~Adv 757 (1096)
..++++..+.. | ..+.+.+.-..+.+++|||+. ||+.|.+.|++
T Consensus 139 -----------------------------~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~ 189 (241)
T 2hoq_A 139 -----------------------------HVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGM 189 (241)
T ss_dssp -----------------------------EEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTC
T ss_pred -----------------------------EEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCC
Confidence 01111111111 1 122333333346799999998 99999999999
Q ss_pred eEEe--cCCchHHHHh---hccccccccchhhhHH
Q 001341 758 GVGI--SGREGLQAAR---AADYSIGKFRFLKRLI 787 (1096)
Q Consensus 758 GIam--~g~~~~~a~~---~aD~vl~~f~~l~~ll 787 (1096)
++.. .|....+... .+|+++.++..+..++
T Consensus 190 ~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l 224 (241)
T 2hoq_A 190 KTVWFRYGKHSERELEYRKYADYEIDNLESLLEVL 224 (241)
T ss_dssp EEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHH
T ss_pred EEEEECCCCCCcccccccCCCCEEECCHHHHHHHH
Confidence 8644 2332222332 6899988876665543
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.70 E-value=2.3e-05 Score=82.59 Aligned_cols=122 Identities=14% Similarity=0.161 Sum_probs=78.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCc---HhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDK---QNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 681 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~---~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1096)
.+.+++.+.++.|++.|+++.++|+.. ...+.......|+...-.. ++ .. ++.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~--~~-~~----~~~----------------- 154 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK--TF-FA----DEV----------------- 154 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE--EE-EH----HHH-----------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh--he-ec----ccc-----------------
Confidence 458999999999999999999999998 7777778888877322110 11 00 000
Q ss_pred CCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh--hhHHHHHHHHHhcCCeEEEEcCCc-cChhhhhhcCee
Q 001341 682 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIG 758 (1096)
Q Consensus 682 ~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP--~qK~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~AdvG 758 (1096)
....| .--..+.+.+.-..+.+++|||+. ||+.|.+.|+++
T Consensus 155 ------------------------------------~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~ 198 (235)
T 2om6_A 155 ------------------------------------LSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMW 198 (235)
T ss_dssp ------------------------------------TCCTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSE
T ss_pred ------------------------------------CCCCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCE
Confidence 00011 111122222222346899999999 999999999999
Q ss_pred EEec--CCchHHHHhhccccccccchhhhH
Q 001341 759 VGIS--GREGLQAARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 759 Iam~--g~~~~~a~~~aD~vl~~f~~l~~l 786 (1096)
+++. |+...+.+..+|+++.++..+..+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 228 (235)
T 2om6_A 199 AVWINQEGDKVRKLEERGFEIPSIANLKDV 228 (235)
T ss_dssp EEEECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred EEEECCCCCCcccCCCCcchHhhHHHHHHH
Confidence 9882 222222233578888877666544
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.68 E-value=1.6e-05 Score=82.57 Aligned_cols=116 Identities=20% Similarity=0.245 Sum_probs=77.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.+++.+.++.|++. +++.++|+.....+..+...+|+...-.
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 126 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA---------------------------------- 126 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE----------------------------------
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc----------------------------------
Confidence 35789999999999999 9999999999888888887777622100
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhH------HHHHHHHHhcCCeEEEEcCCccChhhhhhcCe
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 757 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK------~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv 757 (1096)
..+++.-....| ..+.+.+.-..+.+++|||+.||++|.+.|++
T Consensus 127 ------------------------------~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~ 176 (209)
T 2hdo_A 127 ------------------------------VTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANV 176 (209)
T ss_dssp ------------------------------EEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTC
T ss_pred ------------------------------EEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCC
Confidence 011111111123 22333333234679999999999999999999
Q ss_pred eEEec--CCc-hHHHHhhccccccccchhhh
Q 001341 758 GVGIS--GRE-GLQAARAADYSIGKFRFLKR 785 (1096)
Q Consensus 758 GIam~--g~~-~~~a~~~aD~vl~~f~~l~~ 785 (1096)
++++. |.. ....+. +|+++.++..+..
T Consensus 177 ~~~~~~~~~~~~~~~~~-a~~~~~~~~el~~ 206 (209)
T 2hdo_A 177 DFGLAVWGMDPNADHQK-VAHRFQKPLDILE 206 (209)
T ss_dssp EEEEEGGGCCTTGGGSC-CSEEESSGGGGGG
T ss_pred eEEEEcCCCCChhhhcc-CCEEeCCHHHHHH
Confidence 99872 222 222333 8999887666544
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.68 E-value=3.4e-05 Score=81.28 Aligned_cols=123 Identities=12% Similarity=0.091 Sum_probs=82.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.+.++.|++. +++.++|+.....+.......|+...-.. ++.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~--~~~----------------------------- 147 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS--ITT----------------------------- 147 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEE-----------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce--eEe-----------------------------
Confidence 5679999999999999 99999999999888888888887432110 100
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCc-cChhhhhhcC---eeEE
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKAD---IGVG 760 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~Ad---vGIa 760 (1096)
+... -...-.|.--..+.+.+.-..+.+++|||+. ||+.|.+.|+ ++|+
T Consensus 148 ------~~~~---------------------~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~ 200 (234)
T 3u26_A 148 ------SEEA---------------------GFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLD 200 (234)
T ss_dssp ------HHHH---------------------TBCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEEC
T ss_pred ------cccc---------------------CCCCcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEEC
Confidence 0000 0000011111223333333457899999997 9999999999 5666
Q ss_pred ecCCchHHHHhhccccccccchhhhHH
Q 001341 761 ISGREGLQAARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 761 m~g~~~~~a~~~aD~vl~~f~~l~~ll 787 (1096)
+ |+...+.+..||+++.++..+..++
T Consensus 201 ~-~~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 201 R-KGEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp S-SSTTGGGGGGCSEEESSTHHHHHHH
T ss_pred C-CCCccccccCCCEeeCCHHHHHHHH
Confidence 5 5554455568999999887776654
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.68 E-value=6e-05 Score=81.09 Aligned_cols=122 Identities=15% Similarity=0.078 Sum_probs=82.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 682 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1096)
.-++.+++.+.++.|++.|+++.++|+.....+..+....|+...
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~----------------------------------- 152 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL----------------------------------- 152 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHH-----------------------------------
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhh-----------------------------------
Confidence 346789999999999999999999999999888888888887210
Q ss_pred CcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh-hh--HHH----HHHHHHhcCCeEEEEcCCccChhhhhhc
Q 001341 683 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP-SQ--KAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKA 755 (1096)
Q Consensus 683 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP-~q--K~~----iV~~lk~~~~~v~~iGDG~ND~~ml~~A 755 (1096)
|.. ..++.+..+ .. |.. +.+.+.-..+.+++|||+.||+.|.+.|
T Consensus 153 ----------------------f~~------~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~a 204 (259)
T 4eek_A 153 ----------------------AGE------HIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAA 204 (259)
T ss_dssp ----------------------HCS------CEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHH
T ss_pred ----------------------ccc------eEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHC
Confidence 000 011111111 11 122 2333322346799999999999999999
Q ss_pred CeeE-Eec-CCc-----hHHHHh-hccccccccchhhhHH
Q 001341 756 DIGV-GIS-GRE-----GLQAAR-AADYSIGKFRFLKRLI 787 (1096)
Q Consensus 756 dvGI-am~-g~~-----~~~a~~-~aD~vl~~f~~l~~ll 787 (1096)
+++. .+. |.. ..+... .+|+++.++..+..++
T Consensus 205 G~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l 244 (259)
T 4eek_A 205 GATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAAL 244 (259)
T ss_dssp TCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHH
T ss_pred CCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHH
Confidence 9984 452 211 223443 5899999988877765
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.67 E-value=2.1e-05 Score=83.06 Aligned_cols=126 Identities=13% Similarity=0.043 Sum_probs=84.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-.. ++..+.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~------------------------- 150 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDH--VLSVDA------------------------- 150 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSE--EEEGGG-------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCE--EEEecc-------------------------
Confidence 46789999999999999999999999999988888888887432211 110000
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEec-
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS- 762 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~- 762 (1096)
.-...-.|.--..+.+.+.-..+.+++|||+.||+.|.+.|++++++-
T Consensus 151 -------------------------------~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~ 199 (233)
T 3umb_A 151 -------------------------------VRLYKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWIN 199 (233)
T ss_dssp -------------------------------TTCCTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEEC
T ss_pred -------------------------------cCCCCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEc
Confidence 000000111112233333334577999999999999999999999882
Q ss_pred --CCchHHHHhhccccccccchhhhHH
Q 001341 763 --GREGLQAARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 763 --g~~~~~a~~~aD~vl~~f~~l~~ll 787 (1096)
++.....+..+|+++.++..+..++
T Consensus 200 ~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 200 RLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp TTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred CCCCCchhccCCCCEEECCHHHHHHHH
Confidence 2222233446899999888777654
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.66 E-value=6.6e-05 Score=78.78 Aligned_cols=114 Identities=14% Similarity=0.024 Sum_probs=78.5
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 605 RLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aG-Ikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
++.+++.+.++.|+++| +++.++|+.....+..+...+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 57899999999999999 9999999988888888888888732111
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHH----hcCCeEEEEcCCc-cChhhhhhcCee
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLK----SCDYRTLAIGDGG-NDVRMIQKADIG 758 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk----~~~~~v~~iGDG~-ND~~ml~~AdvG 758 (1096)
. +.+. +.-|...++.+. -..+.+++|||+. ||+.|.+.|+++
T Consensus 151 ------------------------------~-~~~~--~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~ 197 (234)
T 3ddh_A 151 ------------------------------H-IEVM--SDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGY 197 (234)
T ss_dssp ------------------------------E-EEEE--SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCE
T ss_pred ------------------------------e-eeec--CCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCe
Confidence 1 1111 122444444332 2346799999996 999999999999
Q ss_pred EEec------CCchHHHHh-hccccccccchhhh
Q 001341 759 VGIS------GREGLQAAR-AADYSIGKFRFLKR 785 (1096)
Q Consensus 759 Iam~------g~~~~~a~~-~aD~vl~~f~~l~~ 785 (1096)
+++- |++..+... .+|+++.++..+..
T Consensus 198 ~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~ 231 (234)
T 3ddh_A 198 GVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLS 231 (234)
T ss_dssp EEECCCCTTCCCC---CCCCTTEEECSSGGGHHH
T ss_pred EEEecCCcccccCCcccccCCCceecccHHHHHH
Confidence 8773 233322233 44999888766654
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.62 E-value=1.5e-05 Score=85.50 Aligned_cols=50 Identities=16% Similarity=0.131 Sum_probs=39.2
Q ss_pred CeEEEEcCCccChhhhhhcCe---eEEecCCchHHHHhhccccccccchhhhHH
Q 001341 737 YRTLAIGDGGNDVRMIQKADI---GVGISGREGLQAARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 737 ~~v~~iGDG~ND~~ml~~Adv---GIam~g~~~~~a~~~aD~vl~~f~~l~~ll 787 (1096)
+.+++|||+.||+.|.+.|++ +|++ |+...+.+..||+++.++..+...+
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~-~~~~~~~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPD-GNLSRDLTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCC-TTSCGGGSTTSSEECSCGGGCCGGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcC-CCCchhhcccccEeecCHHHhhHHH
Confidence 789999999999999999995 4444 5544455668999999887775543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.60 E-value=6e-05 Score=79.58 Aligned_cols=122 Identities=16% Similarity=0.118 Sum_probs=82.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.+++.++++.|+ .|+++.++|+.....+......+|+...-+
T Consensus 106 ~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~---------------------------------- 150 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFK---------------------------------- 150 (240)
T ss_dssp CCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhce----------------------------------
Confidence 357899999999999 999999999998888888888888743211
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh--hhHHHHHH-HHHh---cCCeEEEEcCCc-cChhhhhhcC
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVE-LLKS---CDYRTLAIGDGG-NDVRMIQKAD 756 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP--~qK~~iV~-~lk~---~~~~v~~iGDG~-ND~~ml~~Ad 756 (1096)
..+++...+ .-|..+++ .++. ..+.+++|||+. ||+.|.+.|+
T Consensus 151 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG 200 (240)
T 3qnm_A 151 ------------------------------KIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVG 200 (240)
T ss_dssp ------------------------------EEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTT
T ss_pred ------------------------------eEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcC
Confidence 111111111 11223333 2233 346899999995 9999999999
Q ss_pred eeEEecCCchH--HHHhhccccccccchhhhHHHhhchh
Q 001341 757 IGVGISGREGL--QAARAADYSIGKFRFLKRLILVHGRY 793 (1096)
Q Consensus 757 vGIam~g~~~~--~a~~~aD~vl~~f~~l~~lll~~GR~ 793 (1096)
+++++ .+.+. .....+|+++.++.-+..+ .+|+.
T Consensus 201 ~~~~~-~~~~~~~~~~~~~d~vi~sl~e~~~~--~~~~~ 236 (240)
T 3qnm_A 201 MHQAF-YNVTERTVFPFQPTYHIHSLKELMNL--LEGHH 236 (240)
T ss_dssp CEEEE-ECCSCCCCCSSCCSEEESSTHHHHHH--TC---
T ss_pred CeEEE-EcCCCCCCcCCCCceEECCHHHHHHH--Hhccc
Confidence 99988 33333 3344789999988777664 45543
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.59 E-value=9.6e-05 Score=78.62 Aligned_cols=116 Identities=12% Similarity=0.152 Sum_probs=77.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.++++.|+++|+++.++|+.....+..+...+|+. .-.
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~----------------------------------- 153 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFD----------------------------------- 153 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCS-----------------------------------
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-cee-----------------------------------
Confidence 46799999999999999999999999888888888888863 211
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh--hhHHH----HHHHHHhcCCeEEEEcCCccChhhhhhcCee
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKADIG 758 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP--~qK~~----iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 758 (1096)
.++++...+ .-|.. +.+.+.-..+.+++|||+.||+.|.+.|++.
T Consensus 154 -----------------------------~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~ 204 (240)
T 2hi0_A 154 -----------------------------FALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMD 204 (240)
T ss_dssp -----------------------------EEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred -----------------------------EEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 111111111 11222 2233332346799999999999999999994
Q ss_pred -EEec-CCch-HHHHh-hccccccccchhhh
Q 001341 759 -VGIS-GREG-LQAAR-AADYSIGKFRFLKR 785 (1096)
Q Consensus 759 -Iam~-g~~~-~~a~~-~aD~vl~~f~~l~~ 785 (1096)
|++. |... .+.+. .+|+++.++..+..
T Consensus 205 ~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~ 235 (240)
T 2hi0_A 205 EIAVNWGFRSVPFLQKHGATVIVDTAEKLEE 235 (240)
T ss_dssp EEEESSSSSCHHHHHHTTCCCEECSHHHHHH
T ss_pred EEEECCCCCchhHHHhcCCCEEECCHHHHHH
Confidence 3442 3322 33443 68999887665544
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.58 E-value=4.3e-05 Score=81.32 Aligned_cols=126 Identities=13% Similarity=0.080 Sum_probs=75.9
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCC--CCCeEEEEcCCcHHHHHHHHHHHHHHccccCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE--PKGQLLSIDGKTEDEVCRSLERVLLTMRITTS 680 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1096)
..++.+++.+.++.|++.|+++.++|+.....+...... |+...- +. ++
T Consensus 106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~--~~-------------------------- 156 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANL--MV-------------------------- 156 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGG--EE--------------------------
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCe--EE--------------------------
Confidence 346789999999999999999999999887766666555 663211 00 00
Q ss_pred CCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeE-
Q 001341 681 EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV- 759 (1096)
Q Consensus 681 ~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI- 759 (1096)
.+. ......-.|.--..+.+.+.-..+.+++|||+.||+.|.+.|+++.
T Consensus 157 ---------~~~---------------------~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i 206 (247)
T 3dv9_A 157 ---------TAF---------------------DVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTI 206 (247)
T ss_dssp ---------CGG---------------------GCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEE
T ss_pred ---------ecc---------------------cCCCCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEE
Confidence 000 0000000111112333333334567999999999999999999764
Q ss_pred Eec-CCchH-HHHh-hccccccccchhhhHH
Q 001341 760 GIS-GREGL-QAAR-AADYSIGKFRFLKRLI 787 (1096)
Q Consensus 760 am~-g~~~~-~a~~-~aD~vl~~f~~l~~ll 787 (1096)
++. |.... +..+ .||+++.++..+..++
T Consensus 207 ~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 207 AVNTGPLHDNVLLNEGANLLFHSMPDFNKNW 237 (247)
T ss_dssp EECCSSSCHHHHHTTTCSEEESSHHHHHHHH
T ss_pred EEcCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 442 22222 2222 7999999877766553
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=4.5e-05 Score=81.05 Aligned_cols=124 Identities=14% Similarity=0.029 Sum_probs=79.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.+.++.|+++|+++.++|+.....+..+...+|+...-.. ++..+..
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 157 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDS--CLSADDL------------------------- 157 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGT-------------------------
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCE--EEEcccc-------------------------
Confidence 5789999999999999999999999999888888888887432110 1100000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEe--c
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI--S 762 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam--~ 762 (1096)
-...-.|.--..+.+.+.-..+.+++|||+.||+.|.+.|++++.. .
T Consensus 158 -------------------------------~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~ 206 (240)
T 2no4_A 158 -------------------------------KIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINR 206 (240)
T ss_dssp -------------------------------TCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECT
T ss_pred -------------------------------CCCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECC
Confidence 0000011112223333333446799999999999999999976533 1
Q ss_pred CCchHHHHhhc-cccccccchhhhH
Q 001341 763 GREGLQAARAA-DYSIGKFRFLKRL 786 (1096)
Q Consensus 763 g~~~~~a~~~a-D~vl~~f~~l~~l 786 (1096)
|.........+ |+++.++..+..+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~el~~~ 231 (240)
T 2no4_A 207 QGNPPEYEFAPLKHQVNSLSELWPL 231 (240)
T ss_dssp TCCCCCCTTSCCSEEESSGGGHHHH
T ss_pred CCCCCcccCCCCceeeCCHHHHHHH
Confidence 32211122356 9998887766554
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.52 E-value=3.5e-05 Score=81.30 Aligned_cols=123 Identities=12% Similarity=0.125 Sum_probs=79.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-.. ++..+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~--------------------------- 145 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDH--LLSVD--------------------------- 145 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEESG---------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhhe--EEEec---------------------------
Confidence 5789999999999999999999999998888888888887432110 11000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 764 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 764 (1096)
. .-...-.|.--..+.+.+.-..+.+++|||+.||+.|.+.|++++.+-..
T Consensus 146 --------~---------------------~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 196 (232)
T 1zrn_A 146 --------P---------------------VQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINR 196 (232)
T ss_dssp --------G---------------------GTCCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECT
T ss_pred --------c---------------------cCCCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcC
Confidence 0 00000111112233333333446799999999999999999999877222
Q ss_pred c---hHHHHhhccccccccchhhh
Q 001341 765 E---GLQAARAADYSIGKFRFLKR 785 (1096)
Q Consensus 765 ~---~~~a~~~aD~vl~~f~~l~~ 785 (1096)
. ....+..+|+++.++..+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~el~~ 220 (232)
T 1zrn_A 197 TGNVFEEMGQTPDWEVTSLRAVVE 220 (232)
T ss_dssp TCCCCCSSSCCCSEEESSHHHHHT
T ss_pred CCCCccccCCCCCEEECCHHHHHH
Confidence 1 11223467888887665544
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.52 E-value=4.2e-05 Score=81.43 Aligned_cols=124 Identities=15% Similarity=0.096 Sum_probs=76.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
.++.+++.+.++.|++.|+++.++|+.....+...... |+...-....++
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~----------------------------- 157 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMV----------------------------- 157 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEE-----------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEE-----------------------------
Confidence 46789999999999999999999999887766665555 653221000000
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeE-E
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-G 760 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-a 760 (1096)
.+. . + ..-.| .--..+.+.+.-..+.+++|||+.||+.|.+.|+++. +
T Consensus 158 ------~~~---------------------~-~-~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~ 208 (243)
T 3qxg_A 158 ------TAF---------------------D-V-KYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIA 208 (243)
T ss_dssp ------CTT---------------------T-C-SSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEE
T ss_pred ------eHH---------------------h-C-CCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEE
Confidence 000 0 0 00111 1111223333223467999999999999999999955 4
Q ss_pred ec-CCch-HHHHh-hccccccccchhhhH
Q 001341 761 IS-GREG-LQAAR-AADYSIGKFRFLKRL 786 (1096)
Q Consensus 761 m~-g~~~-~~a~~-~aD~vl~~f~~l~~l 786 (1096)
+. |... .+... .||+++.++..+..+
T Consensus 209 v~~~~~~~~~l~~~~ad~v~~s~~el~~~ 237 (243)
T 3qxg_A 209 VNTGPLDGQVLLDAGADLLFPSMQTLCDS 237 (243)
T ss_dssp ECCSSSCHHHHHHTTCSEEESCHHHHHHH
T ss_pred EeCCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 42 2222 22222 689999987776654
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00016 Score=75.24 Aligned_cols=115 Identities=16% Similarity=0.132 Sum_probs=79.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.+.++.|++ |+++.++|+.....+..+.+.+|+...-.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 127 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee-----------------------------------
Confidence 577999999999999 99999999998888888888888743211
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHH-Hhc---CCeEEEEcCCccChhhhhhcCe---
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSC---DYRTLAIGDGGNDVRMIQKADI--- 757 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~l-k~~---~~~v~~iGDG~ND~~ml~~Adv--- 757 (1096)
..++++-.+.-|..+.+.+ +.. .+.+++|||+.||+.|.++|++
T Consensus 128 -----------------------------~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i 178 (210)
T 2ah5_A 128 -----------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKL 178 (210)
T ss_dssp -----------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred -----------------------------eeecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEE
Confidence 2223331122344444433 333 4679999999999999999999
Q ss_pred eEEecCCc-hHHHHh-hccccccccchhhh
Q 001341 758 GVGISGRE-GLQAAR-AADYSIGKFRFLKR 785 (1096)
Q Consensus 758 GIam~g~~-~~~a~~-~aD~vl~~f~~l~~ 785 (1096)
||++ |.. ..+.+. .+|+++.++..+..
T Consensus 179 ~v~~-~~~~~~~l~~~~a~~v~~~~~el~~ 207 (210)
T 2ah5_A 179 AITW-GFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp EESS-SSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred EEcC-CCCCHHHHHhCCCCEEECCHHHHHH
Confidence 5554 443 333443 58999887665543
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00011 Score=79.96 Aligned_cols=121 Identities=9% Similarity=0.010 Sum_probs=78.2
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 605 RLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~a-GIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
.+.+++.+.++.|++. |+++.++|+.....+.......|+...+ . ++..+ ..
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f~-~--i~~~~--~~---------------------- 166 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRPE-Y--FITAN--DV---------------------- 166 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCCS-S--EECGG--GC----------------------
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCccC-E--EEEcc--cC----------------------
Confidence 4579999999999999 9999999999988888888888774211 0 11000 00
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh-------cCCeEEEEcCCccChhhhhhcC
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-------CDYRTLAIGDGGNDVRMIQKAD 756 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~-------~~~~v~~iGDG~ND~~ml~~Ad 756 (1096)
.. ..-.|.--..+.+.+.- ..+.+++|||+.||+.|.+.|+
T Consensus 167 ----------------------------~~----~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG 214 (275)
T 2qlt_A 167 ----------------------------KQ----GKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAG 214 (275)
T ss_dssp ----------------------------SS----CTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTT
T ss_pred ----------------------------CC----CCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcC
Confidence 00 00011111223333333 3457999999999999999999
Q ss_pred eeEEe--cCCchHHHHh-hccccccccchhh
Q 001341 757 IGVGI--SGREGLQAAR-AADYSIGKFRFLK 784 (1096)
Q Consensus 757 vGIam--~g~~~~~a~~-~aD~vl~~f~~l~ 784 (1096)
+++.+ .|+...+.+. .||+++.++..+.
T Consensus 215 ~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~ 245 (275)
T 2qlt_A 215 CKIVGIATTFDLDFLKEKGCDIIVKNHESIR 245 (275)
T ss_dssp CEEEEESSSSCHHHHTTSSCSEEESSGGGEE
T ss_pred CEEEEECCCCCHHHHhhCCCCEEECChHHcC
Confidence 87755 2344444444 5899988765543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00014 Score=76.20 Aligned_cols=114 Identities=12% Similarity=0.159 Sum_probs=75.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCC-CCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-PKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
++.+++.+.++.++. +++++|+.....+..+...+|+...- .. ++
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~--~~----------------------------- 132 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPH--IY----------------------------- 132 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTC--EE-----------------------------
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccce--EE-----------------------------
Confidence 467888888888764 99999999988888888888874221 11 11
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEee--Ch--hhHHH----HHHHHHhcCCeEEEEcCCccChhhhhhc
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV--TP--SQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKA 755 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~--tP--~qK~~----iV~~lk~~~~~v~~iGDG~ND~~ml~~A 755 (1096)
+++. .. ..|.. +.+.+.-..+.+++|||+.||++|.+.|
T Consensus 133 ---------------------------------~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~a 179 (229)
T 2fdr_A 133 ---------------------------------SAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAA 179 (229)
T ss_dssp ---------------------------------EHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHT
T ss_pred ---------------------------------eccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHC
Confidence 1000 01 12222 3333333446799999999999999999
Q ss_pred Cee-EEecCCchH-------HHHhh-ccccccccchhhhH
Q 001341 756 DIG-VGISGREGL-------QAARA-ADYSIGKFRFLKRL 786 (1096)
Q Consensus 756 dvG-Iam~g~~~~-------~a~~~-aD~vl~~f~~l~~l 786 (1096)
+++ |++ ++... +.++. ||+++.+...+..+
T Consensus 180 G~~~i~~-~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 180 GMRVIGF-TGASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp TCEEEEE-CCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred CCEEEEE-ecCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 998 666 33322 35555 99999887666554
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0002 Score=72.66 Aligned_cols=39 Identities=15% Similarity=0.354 Sum_probs=32.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 644 (1096)
.+.+++.+.++.|++.|++++++|+... .+.......|+
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 3679999999999999999999998764 45666667776
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00026 Score=74.59 Aligned_cols=119 Identities=17% Similarity=0.187 Sum_probs=80.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.+++.++++.|++. +++.++|+.....+.......|+...-.
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 146 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFK---------------------------------- 146 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhh----------------------------------
Confidence 36789999999999999 9999999999888888888888743211
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChh--hHHHHHH-HHHhcC----CeEEEEcCCc-cChhhhhhc
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVE-LLKSCD----YRTLAIGDGG-NDVRMIQKA 755 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~--qK~~iV~-~lk~~~----~~v~~iGDG~-ND~~ml~~A 755 (1096)
..+++...+. -|..+++ .++..| +.+++|||+. ||+.|.+.|
T Consensus 147 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~a 196 (238)
T 3ed5_A 147 ------------------------------DIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLA 196 (238)
T ss_dssp ------------------------------EEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHT
T ss_pred ------------------------------eEEEecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHC
Confidence 1111111111 1223333 233333 5799999998 999999999
Q ss_pred CeeEEecCCc--hHHHHhhccccccccchhhhHH
Q 001341 756 DIGVGISGRE--GLQAARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 756 dvGIam~g~~--~~~a~~~aD~vl~~f~~l~~ll 787 (1096)
+++..+-+.. ....+..+|+++.++..+..++
T Consensus 197 G~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 197 GLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp TCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred CCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 9965331322 2223447899999988877764
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00028 Score=76.37 Aligned_cols=45 Identities=9% Similarity=0.052 Sum_probs=37.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECC---CcHhHHHHHHHHcCCCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFISP 647 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTG---D~~~ta~~ia~~~gl~~~ 647 (1096)
.+.+-++++++|++++++|++++++|| +...........+|+...
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 455667899999999999999999999 677777777788888543
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.32 E-value=7.6e-05 Score=79.79 Aligned_cols=118 Identities=13% Similarity=0.094 Sum_probs=79.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.+.++.|++. +++.++|+.....+..+...+|+. -+ .+... ++.
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~-f~----~~~~~----~~~-------------------- 169 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP-WD----MLLCA----DLF-------------------- 169 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC-CS----EECCH----HHH--------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC-cc----eEEee----ccc--------------------
Confidence 5679999999999985 999999999988888888888873 11 11000 000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHH----HHHHhcCCeEEEEcCCccChhhhhhcCeeEE
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV----ELLKSCDYRTLAIGDGGNDVRMIQKADIGVG 760 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV----~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIa 760 (1096)
-...-|..++ +.+.-..+.+++|||+.||+.|.+.|+++++
T Consensus 170 -----------------------------------~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~ 214 (254)
T 3umc_A 170 -----------------------------------GHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTA 214 (254)
T ss_dssp -----------------------------------TCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred -----------------------------------ccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEE
Confidence 0111223333 3333244679999999999999999999998
Q ss_pred ecCC---chH----HH--HhhccccccccchhhhHH
Q 001341 761 ISGR---EGL----QA--ARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 761 m~g~---~~~----~a--~~~aD~vl~~f~~l~~ll 787 (1096)
|... .|. +. +..+|+++.++..+..++
T Consensus 215 ~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 215 FIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp EECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred EEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 8321 121 12 347899999877776653
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00041 Score=72.30 Aligned_cols=59 Identities=22% Similarity=0.280 Sum_probs=39.0
Q ss_pred HHHHHhcCCeEEEEcCCccChhhhhhcCee--EEec-CCchHHH-HhhccccccccchhhhHH
Q 001341 729 VELLKSCDYRTLAIGDGGNDVRMIQKADIG--VGIS-GREGLQA-ARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 729 V~~lk~~~~~v~~iGDG~ND~~ml~~AdvG--Iam~-g~~~~~a-~~~aD~vl~~f~~l~~ll 787 (1096)
.+.+.-..+.+++|||+.||+.|.+.|++. |++. |....+. ...+|+++.++..+..++
T Consensus 141 ~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 141 RDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp HHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred HHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 333333446799999999999999999975 4442 3222222 236899998877665543
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00095 Score=72.07 Aligned_cols=43 Identities=14% Similarity=0.243 Sum_probs=35.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECC---CcHhHHHHHHHHcCCCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFISP 647 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTG---D~~~ta~~ia~~~gl~~~ 647 (1096)
.+-++++++|++++++|++++++|| +..........++|+...
T Consensus 22 ~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 22 EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 3446789999999999999999988 777777778888888543
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00016 Score=77.02 Aligned_cols=119 Identities=9% Similarity=0.047 Sum_probs=81.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.++++.|++. +++.++|+.....+..+...+|+. -+. ++. .++.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~-f~~---~~~-----~~~~-------------------- 165 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP-WDV---IIG-----SDIN-------------------- 165 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC-CSC---CCC-----HHHH--------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC-eeE---EEE-----cCcC--------------------
Confidence 5689999999999997 999999999998888888888873 110 000 0000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHH-HHh---cCCeEEEEcCCccChhhhhhcCeeEE
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVEL-LKS---CDYRTLAIGDGGNDVRMIQKADIGVG 760 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~-lk~---~~~~v~~iGDG~ND~~ml~~AdvGIa 760 (1096)
....| |..+++. ++. ..+.+++|||+.||+.|.+.|+++++
T Consensus 166 ---------------------------------~~~kp--~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~ 210 (254)
T 3umg_A 166 ---------------------------------RKYKP--DPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATA 210 (254)
T ss_dssp ---------------------------------TCCTT--SHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred ---------------------------------CCCCC--CHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEE
Confidence 00112 2223332 222 34679999999999999999999998
Q ss_pred ecCCc---hH----H--HHhhccccccccchhhhHHH
Q 001341 761 ISGRE---GL----Q--AARAADYSIGKFRFLKRLIL 788 (1096)
Q Consensus 761 m~g~~---~~----~--a~~~aD~vl~~f~~l~~lll 788 (1096)
|.... |. + ....+|+++.++..+..++.
T Consensus 211 ~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~ 247 (254)
T 3umg_A 211 FILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLR 247 (254)
T ss_dssp EECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHH
T ss_pred EEecCCcCCCCccccccccCCCceEECCHHHHHHHhc
Confidence 83311 11 1 13478999999888877653
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00015 Score=74.74 Aligned_cols=121 Identities=10% Similarity=0.063 Sum_probs=77.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-++.|++.+ ++.|++. +++.++|+.....+..+...+|+...-.. ++.
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~---------------------------- 120 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKG--IFS---------------------------- 120 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEE----------------------------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcE--EEe----------------------------
Confidence 367899999 9999999 99999999998888888888887422110 110
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecC
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 763 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g 763 (1096)
+.. .....-.|.--..+++.+. .+.+++|||+.||+.|.+.|++++.+-.
T Consensus 121 -------~~~---------------------~~~~Kp~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~ 170 (201)
T 2w43_A 121 -------AES---------------------VKEYKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVN 170 (201)
T ss_dssp -------GGG---------------------GTCCTTCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred -------hhh---------------------cCCCCCCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEEC
Confidence 000 0000001211223344444 5679999999999999999999976622
Q ss_pred C---chHHHHhhccccccccchhhhH
Q 001341 764 R---EGLQAARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 764 ~---~~~~a~~~aD~vl~~f~~l~~l 786 (1096)
. ........+|+++.++..+..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~el~~~ 196 (201)
T 2w43_A 171 RKNTIVDPIGGKPDVIVNDFKELYEW 196 (201)
T ss_dssp SSSCCCCTTSCCCSEEESSHHHHHHH
T ss_pred CCCCCccccCCCCCEEECCHHHHHHH
Confidence 2 1111223588888876655443
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00012 Score=79.29 Aligned_cols=124 Identities=12% Similarity=0.048 Sum_probs=80.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.++++.|++.|+++.++|+.... +..+...+|+...-.. ++.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~--~~~----------------------------- 153 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDF--VLT----------------------------- 153 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSC--EEE-----------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhE--EEe-----------------------------
Confidence 47899999999999999999999986653 5777778887432111 110
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCc-cChhhhhhcCeeEEecC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGISG 763 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~AdvGIam~g 763 (1096)
+.. .-...-.|.--..+.+.+.-..+.+++|||+. ||+.|.+.|++++.+..
T Consensus 154 ------~~~---------------------~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~ 206 (263)
T 3k1z_A 154 ------SEA---------------------AGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVV 206 (263)
T ss_dssp ------HHH---------------------HSSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEEC
T ss_pred ------ecc---------------------cCCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEc
Confidence 000 00001112222233444433457899999997 99999999999998732
Q ss_pred Cch--HH---HHhhccccccccchhhhHH
Q 001341 764 REG--LQ---AARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 764 ~~~--~~---a~~~aD~vl~~f~~l~~ll 787 (1096)
... .. ....+|+++.++..+..++
T Consensus 207 ~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 207 GPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp CSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred CCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 221 11 1126899999888777664
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00087 Score=71.52 Aligned_cols=116 Identities=13% Similarity=0.016 Sum_probs=76.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.+.++.|+ .|+++.++|+.....+.......|+...-..
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 156 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPR---------------------------------- 156 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCC----------------------------------
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCce----------------------------------
Confidence 56899999999999 9999999999988877777777776322111
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeCh--hhHHHHHHHHHhcCCeEEEEcCCc-cChhhhhhcCeeEEe
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGI 761 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP--~qK~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~AdvGIam 761 (1096)
+++.-.| .--..+.+.+.-..+.+++|||+. ||+.|.+.|++++.+
T Consensus 157 -------------------------------i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~ 205 (251)
T 2pke_A 157 -------------------------------IEVVSEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIY 205 (251)
T ss_dssp -------------------------------EEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEE
T ss_pred -------------------------------eeeeCCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEE
Confidence 1111112 111223333333446899999999 999999999999866
Q ss_pred cCCchH------H-H-Hhhccc-cccccchhhhH
Q 001341 762 SGREGL------Q-A-ARAADY-SIGKFRFLKRL 786 (1096)
Q Consensus 762 ~g~~~~------~-a-~~~aD~-vl~~f~~l~~l 786 (1096)
-..... + . ...+|+ ++.++..+..+
T Consensus 206 v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 239 (251)
T 2pke_A 206 TPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAA 239 (251)
T ss_dssp CCCC-------------CCTTEEECSSGGGHHHH
T ss_pred ECCCCccccccccccccCCCCeeeeCCHHHHHHH
Confidence 322111 1 1 125787 88887766554
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00017 Score=77.35 Aligned_cols=39 Identities=5% Similarity=0.081 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
++.+++.++++.|+ |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999999888888888873
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00036 Score=71.16 Aligned_cols=41 Identities=22% Similarity=0.232 Sum_probs=37.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCc-HhHHHHHHHHcCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDK-QNTAIQIALSCNFI 645 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~-~~ta~~ia~~~gl~ 645 (1096)
++.|++.++|+.|+++|+++.++||.. ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 678999999999999999999999998 78899999999884
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0035 Score=67.26 Aligned_cols=41 Identities=12% Similarity=0.160 Sum_probs=36.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEC---CCcHhHHHHHHHHcCCCC
Q 001341 606 LQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFIS 646 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~~ 646 (1096)
+-+++.++++.+++.|+++.++| |+..........++|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 66889999999999999999999 999998888888888743
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00024 Score=74.79 Aligned_cols=122 Identities=11% Similarity=0.074 Sum_probs=76.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.+++.++++.|++ |+++.++|+.....+......++- .-. .+..
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~---~fd--~i~~---------------------------- 144 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV---EFD--HIIT---------------------------- 144 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS---CCS--EEEE----------------------------
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC---ccC--EEEE----------------------------
Confidence 678999999999999 899999999888777666554331 100 1100
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh---cCCeEEEEcCCc-cChhhhhhcCeeEE
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS---CDYRTLAIGDGG-NDVRMIQKADIGVG 760 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~---~~~~v~~iGDG~-ND~~ml~~AdvGIa 760 (1096)
+.. .....-.|.-...+++.++. ..+.+++|||+. ||+.|.+.|+++++
T Consensus 145 ------~~~---------------------~~~~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~ 197 (240)
T 3smv_A 145 ------AQD---------------------VGSYKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSA 197 (240)
T ss_dssp ------HHH---------------------HTSCTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEE
T ss_pred ------ccc---------------------cCCCCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEE
Confidence 000 00001122222334333333 346799999996 99999999999998
Q ss_pred ecCCc------h---HHH-HhhccccccccchhhhHH
Q 001341 761 ISGRE------G---LQA-ARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 761 m~g~~------~---~~a-~~~aD~vl~~f~~l~~ll 787 (1096)
+.... + ... ...+|+++.++..+..++
T Consensus 198 ~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 198 WIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp EECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred EEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 83221 1 112 247899998877766553
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.003 Score=64.30 Aligned_cols=130 Identities=11% Similarity=0.098 Sum_probs=79.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcH---hHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQ---NTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTS 680 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~---~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1096)
-++.|++.++++.|+++|+++.++|+... ..+..+...+|+...-. .+...+....
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd---~i~~~~~~~~------------------ 91 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFD---FIYASNSELQ------------------ 91 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEE---EEEECCTTSS------------------
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheE---EEEEcccccc------------------
Confidence 36889999999999999999999998776 78888888888832110 0000000000
Q ss_pred CCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCC-ccChhhhhhcCeeE
Q 001341 681 EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGV 759 (1096)
Q Consensus 681 ~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG-~ND~~ml~~AdvGI 759 (1096)
...+..-.|.--..+++.+.-....+++|||+ .+|+.+-+.|++..
T Consensus 92 ---------------------------------~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~ 138 (189)
T 3ib6_A 92 ---------------------------------PGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHA 138 (189)
T ss_dssp ---------------------------------TTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEE
T ss_pred ---------------------------------ccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 00000111222223333343345689999999 79999999999976
Q ss_pred EecCCchH-----HHHh-hcccccc--ccchhhhHH
Q 001341 760 GISGREGL-----QAAR-AADYSIG--KFRFLKRLI 787 (1096)
Q Consensus 760 am~g~~~~-----~a~~-~aD~vl~--~f~~l~~ll 787 (1096)
..-...+. .... .+|+++. +...+..++
T Consensus 139 i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 139 IWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp EEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHH
T ss_pred EEECCccccccccccccCCCcceeccccHHhHHHHH
Confidence 43222221 1111 6788988 776676664
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0033 Score=67.76 Aligned_cols=42 Identities=21% Similarity=0.367 Sum_probs=37.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEC---CCcHhHHHHHHHHcCCCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFISP 647 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~~~ 647 (1096)
.+ ++++++|++++++|++++++| |+..........++|+...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 45 899999999999999999999 8888888888889998543
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.002 Score=69.66 Aligned_cols=42 Identities=21% Similarity=0.207 Sum_probs=38.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEC---CCcHhHHHHHHHHcCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~ 645 (1096)
+++-+++.++|++|+++|++++++| |+.........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5677999999999999999999999 89998888888898874
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0012 Score=68.98 Aligned_cols=41 Identities=17% Similarity=0.193 Sum_probs=34.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcH---------------hHHHHHHHHcCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQ---------------NTAIQIALSCNF 644 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~---------------~ta~~ia~~~gl 644 (1096)
.++.|++.++|+.|+++|+++.++|+... ..+..+....|+
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 110 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV 110 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999987 455555666665
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0013 Score=67.27 Aligned_cols=40 Identities=8% Similarity=0.007 Sum_probs=35.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
++.+++.+.++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 47799999999999999 99999999988888888888874
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0003 Score=72.82 Aligned_cols=36 Identities=11% Similarity=0.162 Sum_probs=30.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 641 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~ 641 (1096)
++.|++.++++.|++ |+++.++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 567899999999999 999999999887776666655
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.004 Score=64.48 Aligned_cols=42 Identities=19% Similarity=0.252 Sum_probs=38.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 646 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 646 (1096)
++.|++.++++.|++.|+++.++|+.....+......+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999999999843
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0014 Score=68.43 Aligned_cols=53 Identities=19% Similarity=0.210 Sum_probs=39.0
Q ss_pred cCCeEEEEcCCc-cChhhhhhcCeeEEecC--CchHHHHhhccccccccchhhhHH
Q 001341 735 CDYRTLAIGDGG-NDVRMIQKADIGVGISG--REGLQAARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 735 ~~~~v~~iGDG~-ND~~ml~~AdvGIam~g--~~~~~a~~~aD~vl~~f~~l~~ll 787 (1096)
..+.+++|||+. ||+.|.+.|++++.+-. ....+....+|+++.++..+..++
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 171 DASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred CchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 456799999998 99999999999987622 211111347899999887776654
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.37 E-value=0.00038 Score=71.60 Aligned_cols=29 Identities=21% Similarity=0.292 Sum_probs=25.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHh
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQN 633 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ 633 (1096)
++.|++.+.++.|+++|+++.++|+....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~ 119 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRL 119 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChH
Confidence 56899999999999999999999986543
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0036 Score=67.35 Aligned_cols=117 Identities=21% Similarity=0.211 Sum_probs=77.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.++++.|++ |+++.++|+.....+..+...+|+...-+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~----------------------------------- 164 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFD----------------------------------- 164 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCS-----------------------------------
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhh-----------------------------------
Confidence 577999999999998 69999999999988888888888743211
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEee------ChhhHHHHHHHHHhcCCeEEEEcCC-ccChhhhhhcCe
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCDYRTLAIGDG-GNDVRMIQKADI 757 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~------tP~qK~~iV~~lk~~~~~v~~iGDG-~ND~~ml~~Adv 757 (1096)
..+++.- .|+--..+.+.+.-..+.+++|||+ .||+.+-++|++
T Consensus 165 -----------------------------~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~ 215 (260)
T 2gfh_A 165 -----------------------------AIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGL 215 (260)
T ss_dssp -----------------------------EEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTC
T ss_pred -----------------------------eEEecCCCCCCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCC
Confidence 1111111 1111122333333344679999995 999999999999
Q ss_pred --eEEecCCchH--HHHhhccccccccchhhhH
Q 001341 758 --GVGISGREGL--QAARAADYSIGKFRFLKRL 786 (1096)
Q Consensus 758 --GIam~g~~~~--~a~~~aD~vl~~f~~l~~l 786 (1096)
.|++.+.... .....+|+++.+...+..+
T Consensus 216 ~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~ 248 (260)
T 2gfh_A 216 KATVWINKSGRVPLTSSPMPHYMVSSVLELPAL 248 (260)
T ss_dssp SEEEEECTTCCCCSSCCCCCSEEESSGGGHHHH
T ss_pred ceEEEEcCCCCCcCcccCCCCEEECCHHHHHHH
Confidence 5777322111 1123578888877666544
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.014 Score=59.66 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=30.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 639 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia 639 (1096)
++.|++.++++.|+++|+++.++||.....+..+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 57899999999999999999999999887764443
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.023 Score=62.61 Aligned_cols=43 Identities=21% Similarity=0.243 Sum_probs=36.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEC---CCcHhHHHHHHHHcCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~ 645 (1096)
.+++-+++.++++.|+++|++++++| |+.........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45677899999999999999999999 57777777777788874
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0013 Score=62.58 Aligned_cols=41 Identities=12% Similarity=0.052 Sum_probs=35.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+.
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~ 58 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence 46688999999999999999999999888777777777663
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.013 Score=62.19 Aligned_cols=85 Identities=14% Similarity=0.173 Sum_probs=63.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHh----HHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHcccc
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQN----TAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRIT 678 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~----ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (1096)
+.++.|++.+.++.|+++|+++.++||+... .+..-.++.|+...+..
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~---------------------------- 150 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDK---------------------------- 150 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTT----------------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccc----------------------------
Confidence 5788999999999999999999999999753 66666777888432211
Q ss_pred CCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcC-CeEEEEcCCccChhh
Q 001341 679 TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCD-YRTLAIGDGGNDVRM 751 (1096)
Q Consensus 679 ~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~-~~v~~iGDG~ND~~m 751 (1096)
.++.|-....|....+.+.+.| .+++++||..+|.++
T Consensus 151 ------------------------------------~Lilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 151 ------------------------------------TLLLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ------------------------------------TEEEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred ------------------------------------eeEecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 1222222356777777777744 568999999999987
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=95.81 E-value=0.0027 Score=66.54 Aligned_cols=35 Identities=9% Similarity=0.069 Sum_probs=30.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL 640 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~ 640 (1096)
++.|++.++++.|++. +++.++|+.....+..+..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~ 146 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCK 146 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHh
Confidence 4678999999999999 9999999998887776653
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=95.80 E-value=0.015 Score=65.86 Aligned_cols=42 Identities=19% Similarity=0.242 Sum_probs=38.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 646 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 646 (1096)
++.||+.++++.|+++|+++.++|+.....+..+....|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999999988888889853
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.57 E-value=0.013 Score=62.36 Aligned_cols=119 Identities=15% Similarity=0.187 Sum_probs=75.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 682 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1096)
..++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-+. ++
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~--i~---------------------------- 161 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF--IA---------------------------- 161 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--EC----------------------------
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--ee----------------------------
Confidence 34678999999999999999999887764 35566777887432110 00
Q ss_pred CcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCe-eEEe
Q 001341 683 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGI 761 (1096)
Q Consensus 683 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv-GIam 761 (1096)
.++ .+-...-.|+-=..+++.+.-..+.+++|||+.+|+.+-++|++ .|++
T Consensus 162 -------~~~---------------------~~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v 213 (250)
T 4gib_A 162 -------DAG---------------------KCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGV 213 (250)
T ss_dssp -------CGG---------------------GCCSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred -------ccc---------------------ccCCCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEE
Confidence 000 00000112222223344444345789999999999999999998 5577
Q ss_pred cCCchHHHHhhccccccccchhh
Q 001341 762 SGREGLQAARAADYSIGKFRFLK 784 (1096)
Q Consensus 762 ~g~~~~~a~~~aD~vl~~f~~l~ 784 (1096)
++.. -...||+++.+++.|.
T Consensus 214 -~~~~--~~~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 214 -GNYE--NLKKANLVVDSTNQLK 233 (250)
T ss_dssp -SCTT--TTTTSSEEESSGGGCC
T ss_pred -CChh--HhccCCEEECChHhCC
Confidence 3322 2346899998877663
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.38 E-value=0.0026 Score=67.13 Aligned_cols=60 Identities=12% Similarity=0.090 Sum_probs=40.4
Q ss_pred hHHHHHHHHHh----cCCeEEEEcCC-ccChhhhhhcCeeEEe--cCCch-HHHH---hhccccccccchh
Q 001341 724 QKAQLVELLKS----CDYRTLAIGDG-GNDVRMIQKADIGVGI--SGREG-LQAA---RAADYSIGKFRFL 783 (1096)
Q Consensus 724 qK~~iV~~lk~----~~~~v~~iGDG-~ND~~ml~~AdvGIam--~g~~~-~~a~---~~aD~vl~~f~~l 783 (1096)
.|...++.+.+ ..+.+++|||+ .||+.|++.|++++++ .|+.. .+.+ ..+|+++.++..+
T Consensus 177 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el 247 (250)
T 2c4n_A 177 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred CCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHh
Confidence 35555554433 34689999999 7999999999999754 34433 2232 3588888775544
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=95.26 E-value=0.2 Score=50.34 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=36.6
Q ss_pred EEecChhhhhhhhhccCCchHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhc
Q 001341 513 LLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 592 (1096)
Q Consensus 513 l~~KGa~~~il~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~ 592 (1096)
-+.-|..+.|-+... ...+...+.++++..+|..++.+| .
T Consensus 133 ~v~iGn~~~m~~~gi--~i~~~~~~~~~~~~~~G~T~V~va--------------------------------------i 172 (185)
T 2kmv_A 133 KVLIGNREWMIRNGL--VINNDVNDFMTEHERKGRTAVLVA--------------------------------------V 172 (185)
T ss_dssp EEEEECHHHHHHHTC--CCCHHHHHHHHHHHHTTCEEEEEE--------------------------------------E
T ss_pred EEEECCHHHHHHcCC--CCCHHHHHHHHHHHhCCCeEEEEE--------------------------------------E
Confidence 345688776643211 112345566778888999988888 5
Q ss_pred CcEEEEEeecccc
Q 001341 593 DLKVLGVTAIEDR 605 (1096)
Q Consensus 593 ~l~llG~~~ieD~ 605 (1096)
|-.++|++++.|+
T Consensus 173 dg~l~g~iavaD~ 185 (185)
T 2kmv_A 173 DDELCGLIAIADT 185 (185)
T ss_dssp TTEEEEEEEEECC
T ss_pred CCEEEEEEEEEcC
Confidence 6789999999995
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.25 E-value=0.027 Score=58.38 Aligned_cols=40 Identities=15% Similarity=0.202 Sum_probs=34.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
++.|++.++++.|+++|+++.++|+... .+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 5789999999999999999999999866 467777788873
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.21 E-value=0.051 Score=56.82 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=35.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 644 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl 644 (1096)
-++.|++.++++.|+++| ++.++|+.....+..+...+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 468999999999999999 9999999988888888877776
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.15 E-value=0.0092 Score=59.95 Aligned_cols=40 Identities=30% Similarity=0.383 Sum_probs=33.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCC---------------cHhHHHHHHHHcCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGD---------------KQNTAIQIALSCNF 644 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD---------------~~~ta~~ia~~~gl 644 (1096)
++.|++.++|+.|+++|+++.++|+. ....+..+....|+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 96 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGV 96 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCC
Confidence 57899999999999999999999997 45566667777776
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.09 E-value=0.019 Score=61.03 Aligned_cols=43 Identities=16% Similarity=0.139 Sum_probs=36.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcH----hHHHHHHHHcCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQ----NTAIQIALSCNFI 645 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~----~ta~~ia~~~gl~ 645 (1096)
++++.|++.+.++.|+++|+++.++||+.. +.+..-.+..|+.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 578899999999999999999999999975 3556666778884
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.47 E-value=0.042 Score=58.76 Aligned_cols=43 Identities=14% Similarity=0.219 Sum_probs=34.9
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHh---HHHHHHHHcCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQN---TAIQIALSCNFI 645 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~---ta~~ia~~~gl~ 645 (1096)
+.++-|++.++|+.|+++|+++.++||+... .+......+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 3578899999999999999999999999843 444455677874
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=93.84 E-value=0.047 Score=59.80 Aligned_cols=32 Identities=19% Similarity=0.228 Sum_probs=28.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhH
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNT 634 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~t 634 (1096)
++++.|++.++++.|+++|+++.++||.....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 56778999999999999999999999998543
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=93.74 E-value=0.094 Score=56.16 Aligned_cols=39 Identities=10% Similarity=0.198 Sum_probs=33.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHc
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 642 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 642 (1096)
-++.|++.++++.|+++|+++.++|+-....+..+-...
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~ 167 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 167 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence 468899999999999999999999999888777665543
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=93.45 E-value=0.21 Score=52.81 Aligned_cols=44 Identities=18% Similarity=0.282 Sum_probs=32.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEC---CCcHhHHHHHHHHcCCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFIS 646 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlT---GD~~~ta~~ia~~~gl~~ 646 (1096)
.++.-+++.++++.++++|+++.++| |.............|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 44555789999999999999999999 666666666666777743
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=91.68 E-value=0.1 Score=57.78 Aligned_cols=42 Identities=17% Similarity=0.261 Sum_probs=38.0
Q ss_pred eccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHc
Q 001341 601 AIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 642 (1096)
Q Consensus 601 ~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 642 (1096)
.+...+.+++.+.++.|+++|++||++||-....+..+|...
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 344568899999999999999999999999999999999875
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=89.90 E-value=0.056 Score=55.94 Aligned_cols=28 Identities=14% Similarity=0.266 Sum_probs=24.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCcHh
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDKQN 633 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~~~ 633 (1096)
+.+++.+.++.|+++|+++.++||....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~ 116 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPT 116 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 4678999999999999999999998653
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=89.70 E-value=0.24 Score=52.18 Aligned_cols=40 Identities=15% Similarity=0.169 Sum_probs=32.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
.++.|++.+.++.|+++|+++.++|+... +..+-...|+.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~ 133 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELR 133 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhc
Confidence 46789999999999999999999998653 44556677774
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=88.45 E-value=0.4 Score=50.95 Aligned_cols=43 Identities=12% Similarity=0.183 Sum_probs=34.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHH----cCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS----CNFIS 646 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~----~gl~~ 646 (1096)
++.-+++.++++.+++.|+++.++||+...+...++.. +|+..
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 33346888999999999999999999988777666654 78743
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=88.22 E-value=0.55 Score=44.89 Aligned_cols=40 Identities=13% Similarity=0.049 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCc---HhHHHHHHHHcCCC
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDK---QNTAIQIALSCNFI 645 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~---~~ta~~ia~~~gl~ 645 (1096)
+.+++.++|++|+++|++++++||+. ...+...+.+.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45799999999999999999999997 56667777888873
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=87.88 E-value=3 Score=44.08 Aligned_cols=42 Identities=31% Similarity=0.348 Sum_probs=34.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHH---cCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS---CNFI 645 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~---~gl~ 645 (1096)
+.+-+++.++|+.++++|+++.++||+...+...++.. +|+.
T Consensus 16 ~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 16 NRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp TEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 33448999999999999999999999998777766665 5663
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=84.93 E-value=1.1 Score=51.34 Aligned_cols=26 Identities=19% Similarity=0.427 Sum_probs=24.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCc
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDK 631 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~ 631 (1096)
+-|++.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=82.26 E-value=2.1 Score=50.31 Aligned_cols=26 Identities=23% Similarity=0.321 Sum_probs=24.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGD 630 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD 630 (1096)
++.+++.++++.|+++|+++.++|+-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999985
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1096 | ||||
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-26 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 2e-22 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 6e-16 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-13 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 2e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-06 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 4e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-05 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 8e-04 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 0.002 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 0.002 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 0.003 |
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 111 bits (277), Expect = 1e-26
Identities = 53/447 (11%), Positives = 107/447 (23%), Gaps = 106/447 (23%)
Query: 355 ATNTAISEDLAQVEY------ILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGL 408
+ + E L Y I + + R IF ++ + LK
Sbjct: 21 VSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNR------IFQKDKILNKLK---- 70
Query: 409 LNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNK 468
+ G L ++ + + IL K + EA ++
Sbjct: 71 ----SLGLNSNWDMLFIVFSIHLI--------DILKKLSHDEIEAFMYQDE--------- 109
Query: 469 NASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA 528
+E+K L + + V + + L + A + +
Sbjct: 110 ---PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN-NIYAALEEFATTELHV---S 162
Query: 529 GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ 588
+ A+ +Q + L + E+ E + FK +
Sbjct: 163 DATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPV----- 217
Query: 589 RLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 648
D V + L+ AG + TG + + +
Sbjct: 218 -------------------DEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYF 258
Query: 649 PKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL 708
+ + V++ + + K
Sbjct: 259 EADFIATASD-----------------------------VLEAENMYPQARPLGKPNPF- 288
Query: 709 AILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD---IGV--GISG 763
+ + +GD D+ QK IG G+ G
Sbjct: 289 -SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKG 347
Query: 764 REGLQ--AARAADYSIGKFRFLKRLIL 788
++ A ADY I L+ ++
Sbjct: 348 KDAAGELEAHHADYVINHLGELRGVLD 374
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 95.0 bits (235), Expect = 2e-22
Identities = 47/252 (18%), Positives = 77/252 (30%), Gaps = 42/252 (16%)
Query: 372 TDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNT 431
DK + F I G Y E G+ LK+ + + ++ T+ A+CN
Sbjct: 9 IDKVDGDFCSLNEFS---ITGSTYAPE-GEVLKNDKPIRS--GQFDGLVELATICALCND 62
Query: 432 VIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVL----QYEIL 487
++ + K E AL ++++ + N +
Sbjct: 63 SSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 122
Query: 488 ETLEFTSDRKRMSVVVK----DCHSGNISLLSKGADEAILP---YAHAGQQTRTFVEAVE 540
TLEF+ DRK MSV + + KGA E ++ Y G V+
Sbjct: 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVK 182
Query: 541 Q----------YSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRL 590
+ + LR L LA R+ +
Sbjct: 183 EKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFME---------------Y 227
Query: 591 EHDLKVLGVTAI 602
E DL +GV +
Sbjct: 228 ETDLTFVGVVGM 239
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 75.7 bits (185), Expect = 6e-16
Identities = 28/204 (13%), Positives = 57/204 (27%), Gaps = 41/204 (20%)
Query: 416 SPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQ---SQDEEALVHAAAQLHMVLVNKNASI 472
SP + +CN + + + K E AL+ S+
Sbjct: 31 SPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG-------SV 83
Query: 473 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKD-CHSGNISLLSKGADEAILPYA----- 526
+++ + + + F S K + + + + L+ KGA E IL
Sbjct: 84 RKMRD-----RNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV 138
Query: 527 ------HAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDRE 580
+ F A + LG R L + ++ + +
Sbjct: 139 QGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNF----- 193
Query: 581 WRIAEVCQRLEHDLKVLGVTAIED 604
L +G+ ++ D
Sbjct: 194 ---------PTEKLCFVGLMSMID 208
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 67.5 bits (164), Expect = 2e-13
Identities = 44/191 (23%), Positives = 69/191 (36%), Gaps = 41/191 (21%)
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 652
D T D + V +I+ R AGI M+TGD + TAI I +
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA 67
Query: 653 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 712
+ G+ D++ + +R
Sbjct: 68 DRAYTGREFDDLPLAEQREACRR------------------------------------- 90
Query: 713 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR- 771
RV PS K+++VE L+S D T GDG ND ++KA+IG+ + G A+
Sbjct: 91 -ACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGS--GTAVAKT 147
Query: 772 AADYSIGKFRF 782
A++ + F
Sbjct: 148 ASEMVLADDNF 158
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (113), Expect = 2e-06
Identities = 32/215 (14%), Positives = 63/215 (29%), Gaps = 23/215 (10%)
Query: 574 STLIDRE--WRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDK 631
ST+I E +A++C + V+ + R G L + ++ +
Sbjct: 19 STVIREEGIDELAKICGVEDA------VSEMTRRAMGGAVPFKAALTE---RLALIQPSR 69
Query: 632 QNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 691
+ IA ++P + + + + + +
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELV---------SRLQERNVQVFLISGGFRSIVEHVASKLN 120
Query: 692 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL--KSCDYRTLAIGDGGNDV 749
+ K + K ++++LL K + + IGDG D+
Sbjct: 121 IPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180
Query: 750 RMIQKADIGVGISGREGL-QAARAADYSIGKFRFL 783
AD +G G Q A + I F L
Sbjct: 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 47.7 bits (112), Expect = 3e-06
Identities = 26/192 (13%), Positives = 56/192 (29%), Gaps = 21/192 (10%)
Query: 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTED 662
+ + E I GI ++TG+ A ++ P +I K +
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 663 EVCRS-----------LERVLLTMRITTSEPKDVAFVVDGWALEI-ALKHYRKAFTELAI 710
S +R T + V+ + + ++ +
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLV 136
Query: 711 LSRTAICCRVTPSQKAQLVELLKSCDY------RTLAIGDGGNDVRMIQKADIGVGIS-G 763
+ V + + K+ ++ +GDG ND+ + V ++
Sbjct: 137 AVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQA 196
Query: 764 REGLQAARAADY 775
+ L+ ADY
Sbjct: 197 PKILKE--NADY 206
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 45.1 bits (106), Expect = 4e-06
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQN 633
D D L++ ++ L++ GI M+TGD
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWR 49
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 44.2 bits (103), Expect = 3e-05
Identities = 30/210 (14%), Positives = 63/210 (30%), Gaps = 25/210 (11%)
Query: 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP---EPKGQLLSIDGK 659
+ + E+I + K G+ +L+G+ + + P E G + DG
Sbjct: 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77
Query: 660 TEDEVCRSLERVLLT-------MRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 712
+ L MR + A E ++A + ++
Sbjct: 78 IKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIF 137
Query: 713 RTAICCRVTPSQKAQLVELLKSCDY------RTLAIGDGGNDVRMIQKADIGVGIS-GRE 765
+ + + + + K + L IGD ND+ M Q + +
Sbjct: 138 YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD 197
Query: 766 GLQAARAADYSI------GKFRFLKRLILV 789
++A +D+ + K L+
Sbjct: 198 NIKA--VSDFVSDYSYGEEIGQIFKHFELM 225
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 41.4 bits (96), Expect = 2e-04
Identities = 23/110 (20%), Positives = 35/110 (31%)
Query: 687 FVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG 746
++ E+ R K Q V KS YR +A GD
Sbjct: 96 EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSY 155
Query: 747 NDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYN 796
ND M+ +A G+ E + ++ + LKR L S +
Sbjct: 156 NDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSRSLS 205
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 40.3 bits (93), Expect = 8e-04
Identities = 34/204 (16%), Positives = 71/204 (34%), Gaps = 25/204 (12%)
Query: 607 QDGVPETIETLRKAGINFWMLTGD-----KQNTAIQIALSCNFISPEPKGQLLSIDGKTE 661
+ + + L + + TG + + F S P+ L + E
Sbjct: 84 KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAE 143
Query: 662 DEVCRSLERVLLTMR--ITTSEPKDVAFVVDGWALEIALKHYRKAFT---ELAILSRTAI 716
+ +S + + + EP D ++ + L+ K + +L ++S
Sbjct: 144 VQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEH 203
Query: 717 CCRVTPSQKAQLVELLKSCDY------RTLAIGDGGNDVRMIQKADIGVGIS-GREGLQA 769
++ + ++ L + T A+GD ND M++ A GV + RE +++
Sbjct: 204 NFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKS 263
Query: 770 ARAADYSI------GKFRFLKRLI 787
AD G +K L+
Sbjct: 264 --IADAVTLTNDEHGVAHMMKHLL 285
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 39.0 bits (89), Expect = 0.002
Identities = 24/171 (14%), Positives = 56/171 (32%), Gaps = 4/171 (2%)
Query: 609 GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEV--CR 666
GV E ++ + K + + + + E + ++ E+ + +
Sbjct: 29 GVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAEETIKELK 88
Query: 667 SLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKA 726
+ V+ + + G A + K + +
Sbjct: 89 NRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILE 148
Query: 727 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 777
++ ++ T+A+GDG ND+ M +KA + + + L+ AD I
Sbjct: 149 KIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKE--KADICI 197
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 38.5 bits (88), Expect = 0.002
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 738 RTLAIGDGGNDVRMIQKADIGVGISG 763
TL +GDG ND +++ D V + G
Sbjct: 205 TTLGLGDGPNDAPLLEVMDYAVIVKG 230
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 38.4 bits (88), Expect = 0.003
Identities = 11/73 (15%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Query: 716 ICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI-SGREGLQAARAAD 774
C K ++ L + + IGD DV + +D+ +
Sbjct: 141 TCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNH 200
Query: 775 YSIGKFRFLKRLI 787
F +++ I
Sbjct: 201 LPYQDFYEIRKEI 213
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1096 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.93 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.91 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.89 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.89 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.85 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.84 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.79 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.12 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.11 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.08 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.07 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.99 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.96 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.95 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.91 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.84 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.73 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.7 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.65 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.51 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.45 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.43 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.27 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.07 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.96 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.47 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.31 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.26 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.16 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 96.9 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.81 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.6 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.41 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.3 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.27 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.14 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.08 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.95 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.33 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.29 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.26 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 94.96 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 94.92 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 94.76 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.63 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 93.68 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 93.55 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.54 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 93.16 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 92.85 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 89.58 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 88.49 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 87.63 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 84.6 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 84.45 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.93 E-value=3.8e-26 Score=227.37 Aligned_cols=149 Identities=28% Similarity=0.367 Sum_probs=115.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
||+|++++++|+.|+++||+|||+|||+..||.++|+++||+.++.....
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~------------------------------ 68 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD------------------------------ 68 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTT------------------------------
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCcccccc------------------------------
Confidence 99999999999999999999999999999999999999999877643100
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecC
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 763 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g 763 (1096)
..++|..++.......+. ...+..+++|++|+||..+|+.+|+.|++|+|+|||.||++||++|||||+| +
T Consensus 69 ---~~~~~~~~~~~~~~~~~~-----~~~~~~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~-~ 139 (168)
T d1wpga2 69 ---RAYTGREFDDLPLAEQRE-----ACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM-G 139 (168)
T ss_dssp ---TEEEHHHHHHSCHHHHHH-----HHHHCCEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE-T
T ss_pred ---ccccccccchhhHHHHhh-----hhhhhhhhhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe-c
Confidence 022333332221111111 1234678999999999999999999999999999999999999999999999 6
Q ss_pred CchHHHHhhccccccccchhhhH-HHhhc
Q 001341 764 REGLQAARAADYSIGKFRFLKRL-ILVHG 791 (1096)
Q Consensus 764 ~~~~~a~~~aD~vl~~f~~l~~l-ll~~G 791 (1096)
+....++++||+++.+.++-..+ ++.||
T Consensus 140 ~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 140 SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 54444566999999986665444 24555
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.91 E-value=1.6e-26 Score=241.78 Aligned_cols=198 Identities=15% Similarity=0.141 Sum_probs=137.8
Q ss_pred ceEEEEEEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCce---eeecCCccHHHHHHHH
Q 001341 382 RMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAI---LYKAQSQDEEALVHAA 458 (1096)
Q Consensus 382 ~m~v~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~---~~~~~sp~e~Al~~~a 458 (1096)
-|+|+++|++|..|..+...... -......++.+..++.++++||++....++++.. ....|||+|.||+.+|
T Consensus 1 ~MTV~~~w~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a 76 (214)
T d1q3ia_ 1 MMTVAHMWFDNQIHEADTTEDQS----GATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCI 76 (214)
T ss_dssp CCEEEEEEETTEEEECCCC----------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHH
T ss_pred CeEEEEEEECCEEEEcCCCCcCC----CcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHH
Confidence 39999999999988543221110 0112234567788999999999987654432211 1236999999999999
Q ss_pred HhcCeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCC-CCeEEEEecChhhhhhhhhcc---------
Q 001341 459 AQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH-SGNISLLSKGADEAILPYAHA--------- 528 (1096)
Q Consensus 459 ~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~~l~~KGa~~~il~~~~~--------- 528 (1096)
.+.|... ...+..|+++..+||+|+||||+++++.+. ++.+++|+|||||+|+++|+.
T Consensus 77 ~~~~~~~------------~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~ 144 (214)
T d1q3ia_ 77 ELSCGSV------------RKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIP 144 (214)
T ss_dssp HHHHSCH------------HHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEE
T ss_pred HHhCCCH------------HHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceee
Confidence 9877643 223445778999999999999999999753 467899999999999999972
Q ss_pred --CCchHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeeccccC
Q 001341 529 --GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRL 606 (1096)
Q Consensus 529 --~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ieD~l 606 (1096)
....+.+.+.+++||.+|+|||++|||+++.+++..|... +.+ ..+..|+||+|+|++||+||+
T Consensus 145 l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~---------~~~-----~~~~~e~~L~flGlvgi~DPP 210 (214)
T d1q3ia_ 145 LDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKF---------DTD-----ELNFPTEKLCFVGLMSMIDHH 210 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCC---------CTT-----TTSSCCSSEEEEEEEEEESCC
T ss_pred chHHHHHHHHHHHHHHhhCCcEEEEEEEEecCcccccccccc---------Chh-----hhhhhcCCCEEEEEEEEEeCC
Confidence 1124678999999999999999999999988776543210 000 113567999999999999999
Q ss_pred CCC
Q 001341 607 QDG 609 (1096)
Q Consensus 607 r~~ 609 (1096)
|+.
T Consensus 211 R~~ 213 (214)
T d1q3ia_ 211 HHH 213 (214)
T ss_dssp SCC
T ss_pred CCC
Confidence 974
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.89 E-value=1.7e-28 Score=280.20 Aligned_cols=332 Identities=14% Similarity=0.036 Sum_probs=219.1
Q ss_pred cccccccceEEEEecCCCCCCCCceEEEEEEEcCEeecCCCccCCCchhhHHhhh-cCChhHHHHHHHHhhhceeecccC
Q 001341 359 AISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAIT-SGSPDVIRFLTVMAVCNTVIPAKS 437 (1096)
Q Consensus 359 ~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~lc~~~~~~~~ 437 (1096)
...|.||..+++|+|||||+|.|.|+++.+. +.+.+..++ ..-+...++..+.++|+.+....
T Consensus 31 ~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~---------------~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~- 94 (380)
T d1qyia_ 31 MDKCYLGLHSHIDWETLTDNDIQDIRNRIFQ---------------KDKILNKLKSLGLNSNWDMLFIVFSIHLIDILK- 94 (380)
T ss_dssp HCTTTTCCSCCCCGGGCCHHHHHHHHHHHHT---------------TTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHT-
T ss_pred hchhhcccceeeecCcccchhhhhheeeeec---------------chhhhHhhhhcCCChhHHHHHHHHHHHHHHHHh-
Confidence 3458999999999999999999999765421 111111111 11122345566667777644221
Q ss_pred CCCceeeecCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecC
Q 001341 438 KAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKG 517 (1096)
Q Consensus 438 ~~~~~~~~~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KG 517 (1096)
..++|++.+++...+..+..+ ......+.....+||++.+|+|++..... ++.+..+.||
T Consensus 95 -------~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~i~f~~~~k~~~~~~~~~-~~~~~~~~~~ 154 (380)
T d1qyia_ 95 -------KLSHDEIEAFMYQDEPVELKL------------QNISTNLADCFNLNEQLPLQFLDNVKVGK-NNIYAALEEF 154 (380)
T ss_dssp -------TSCHHHHHHHHHCSSCHHHHH------------TTSGGGCSSCCCCCTTTTHHHHTTCCSSH-HHHHHHHHHH
T ss_pred -------hcCCCcHHHHHHHHhhccchH------------HHHHHhccccccCCcchHHHHHhhhcccc-cchhHhhhhc
Confidence 246788888887655433222 11223344456789999999999876543 3445556677
Q ss_pred hhhhhhhhhccCCchHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEE
Q 001341 518 ADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVL 597 (1096)
Q Consensus 518 a~~~il~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~ll 597 (1096)
+++.+... ......+...+..++.+|+|++++|++..++.+ .....+....
T Consensus 155 a~~~~~~~---~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~--------------------------~~~~~~~~~~ 205 (380)
T d1qyia_ 155 ATTELHVS---DATLFSLKGALWTLAQEVYQEWYLGSKLYEDVE--------------------------KKIARTTFKT 205 (380)
T ss_dssp HHHHTTCS---CCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHH--------------------------CSCCSCSSCC
T ss_pred cHhhcCCc---HHHHHHHHhHHHHHHHHHHHHHHHhhhcccccc--------------------------cccchhhHhc
Confidence 77765322 223455677889999999999998865443221 1223455677
Q ss_pred EEeeccccCCC--ChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHc
Q 001341 598 GVTAIEDRLQD--GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM 675 (1096)
Q Consensus 598 G~~~ieD~lr~--~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (1096)
|+++.+|+++| +++++|+.|+++||+++|+|||+..+|..+++++||...-....+ +.+ +++...... .
T Consensus 206 g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i--~~~---~d~~~~~~~----~ 276 (380)
T d1qyia_ 206 GYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFI--ATA---SDVLEAENM----Y 276 (380)
T ss_dssp CTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGE--ECH---HHHHHHHHH----S
T ss_pred ccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceE--Eec---chhhhhhhh----c
Confidence 99999999776 999999999999999999999999999999999999653221011 111 111000000 0
Q ss_pred cccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhc
Q 001341 676 RITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKA 755 (1096)
Q Consensus 676 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~A 755 (1096)
.......+. +. +. ......++|.+|.+|..+++.++..++.|+|+|||.||++|.+.|
T Consensus 277 ~~~~~~~KP-----~p-----------~~------~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~A 334 (380)
T d1qyia_ 277 PQARPLGKP-----NP-----------FS------YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKI 334 (380)
T ss_dssp TTSCCCCTT-----ST-----------HH------HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHH
T ss_pred cccccccCC-----Ch-----------HH------HHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHC
Confidence 000000000 00 00 112345678999999999999999999999999999999999999
Q ss_pred C---eeEEecCCchHHHH----h-hccccccccchhhhHH
Q 001341 756 D---IGVGISGREGLQAA----R-AADYSIGKFRFLKRLI 787 (1096)
Q Consensus 756 d---vGIam~g~~~~~a~----~-~aD~vl~~f~~l~~ll 787 (1096)
| |||+| |..+++++ + .||+++.++..+..++
T Consensus 335 g~~~Igv~~-G~~g~~~~~el~~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 335 GATFIGTLT-GLKGKDAAGELEAHHADYVINHLGELRGVL 373 (380)
T ss_dssp TCEEEEESC-BTTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred CCCEEEEec-CCCCcccHHHHHhCCCCEEECCHHHHHHHH
Confidence 9 99988 65554332 2 6999999988887764
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.89 E-value=1.2e-23 Score=200.47 Aligned_cols=121 Identities=25% Similarity=0.342 Sum_probs=101.5
Q ss_pred CcEEEEEeeccccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHH
Q 001341 593 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVL 672 (1096)
Q Consensus 593 ~l~llG~~~ieD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (1096)
|.+..+.++++|++|++++++|+.|+++||++||+|||+.++|.++|++|||
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI---------------------------- 60 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL---------------------------- 60 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTC----------------------------
T ss_pred CCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhh----------------------------
Confidence 4455668999999999999999999999999999999999999999999998
Q ss_pred HHccccCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhh
Q 001341 673 LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMI 752 (1096)
Q Consensus 673 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml 752 (1096)
..++++++|++|..+|+.+|.. +.|+|+|||.||+|||
T Consensus 61 -----------------------------------------~~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL 98 (135)
T d2b8ea1 61 -----------------------------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPAL 98 (135)
T ss_dssp -----------------------------------------SEEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHH
T ss_pred -----------------------------------------hhhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHH
Confidence 2467899999999999998864 6899999999999999
Q ss_pred hhcCeeEEecCCchHHHHhhccccccccchhh
Q 001341 753 QKADIGVGISGREGLQAARAADYSIGKFRFLK 784 (1096)
Q Consensus 753 ~~AdvGIam~g~~~~~a~~~aD~vl~~f~~l~ 784 (1096)
++|||||+| ++....++++||+++.+.++-.
T Consensus 99 ~~Advgia~-~~~~~~~~~aADivl~~~~l~~ 129 (135)
T d2b8ea1 99 AQADLGIAV-GSGSDVAVESGDIVLIRDDLRD 129 (135)
T ss_dssp HHSSEEEEE-CCC--------SEEESSCCTHH
T ss_pred HhCCeeeec-CccCHHHHHhCCEEEECCCHHH
Confidence 999999999 5544446669999999866543
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.85 E-value=4e-22 Score=183.19 Aligned_cols=109 Identities=24% Similarity=0.293 Sum_probs=90.7
Q ss_pred EEEEEECCeE--EEEeccCCccccEEEeecCCcccccEEEEeccCCCceEEEEecccCCCCCcEeeeccccccCCCHhhh
Q 001341 102 EVWVVKQGIK--KLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELL 179 (1096)
Q Consensus 102 ~~~V~r~g~~--~~i~~~~l~vGDIV~l~~g~~vPaD~ill~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~ 179 (1096)
.++|+|+|++ ++|++++|+|||||.|++||+|||||+||... .+.++||||+|||||.|+.|.+...
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~--~~~l~vdes~lTGEs~pv~K~~~~~--------- 70 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIK--STTLRVDQSILTGESVSVIKHTEPV--------- 70 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEC--SSCCEEECHHHHSCCSCEECCCSCC---------
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEee--ccceEEEEeecccceEEEEeecccc---------
Confidence 5799999985 78999999999999999999999999999643 2448999999999999999964221
Q ss_pred ccceeEEEccCCCCccceeeeEEEeCCCCCCCCccccCcCCeeeecceeecCCeEEEEEEEecCcccccccC
Q 001341 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR 251 (1096)
Q Consensus 180 ~~~~~~i~~~~p~~~~~~f~g~~~~~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~ 251 (1096)
.+......+..|++|+||.+.+| .++++|++||.+|.+|++.
T Consensus 71 -----------------------------~~~~~~~~~~~n~lf~GT~V~~G-~~~~~V~~tG~~T~~G~i~ 112 (115)
T d1wpga1 71 -----------------------------PDPRAVNQDKKNMLFSGTNIAAG-KALGIVATTGVSTEIGKIR 112 (115)
T ss_dssp -----------------------------CCTTCCGGGCTTEECTTCEEEEC-EEEEEEEECGGGSHHHHHH
T ss_pred -----------------------------cccccccccccceEEeccEEEee-eEEEEEEEEccccHHHHHH
Confidence 01112223578999999999998 7999999999999999764
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.84 E-value=2.4e-22 Score=213.63 Aligned_cols=213 Identities=21% Similarity=0.231 Sum_probs=140.1
Q ss_pred EEEecCCCCCCCCceEEEEEEEcCEeecCCCccCCCchhhHHhhhcCChhHHHHHHHHhhhceeecccCCCCceeeecCC
Q 001341 369 YILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQS 448 (1096)
Q Consensus 369 ~I~~DKTGTLT~n~m~v~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lc~~~~~~~~~~~~~~~~~~s 448 (1096)
..+.||++..| +.++++.+.|..|... +....+.... .....+.+.+++.++++||++....++++......|+
T Consensus 6 m~v~~~~~~~~---~~~~~~~VtG~~y~p~-G~i~~~~~~v--~~~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~ 79 (239)
T d1wpga3 6 MFIIDKVDGDF---CSLNEFSITGSTYAPE-GEVLKNDKPI--RSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGE 79 (239)
T ss_dssp EEEEEEEETTE---EEEEEEEECCSSSSSC-CCEEETTEEC--CGGGCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESC
T ss_pred EEEEeeecCCc---ccceEEEEEeEeeCCc-eEEEECCcCc--CccccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCC
Confidence 34556654333 4555666666666442 1111111000 1123566788999999999988765544444466899
Q ss_pred ccHHHHHHHHHhcCeEEeeeCCcEEE----EEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCC----eEEEEecChhh
Q 001341 449 QDEEALVHAAAQLHMVLVNKNASILE----IKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSG----NISLLSKGADE 520 (1096)
Q Consensus 449 p~e~Al~~~a~~~g~~~~~~~~~~~~----~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~----~~~l~~KGa~~ 520 (1096)
|+|.||+.+|.+.|+.........-. ......+..|++++.+||||+||||||+++.++++ .+.+|+|||||
T Consensus 80 pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe 159 (239)
T d1wpga3 80 ATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPE 159 (239)
T ss_dssp HHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHH
T ss_pred CCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChH
Confidence 99999999999998754322110000 00001145799999999999999999999986432 47899999999
Q ss_pred hhhhhhcc----C-------CchHHHHHHHHHH--HhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHH
Q 001341 521 AILPYAHA----G-------QQTRTFVEAVEQY--SQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVC 587 (1096)
Q Consensus 521 ~il~~~~~----~-------~~~~~~~~~~~~~--a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 587 (1096)
.|+++|.. + ...+.+.+.++++ |++|+|||++|||+++.++...+. .+. ...
T Consensus 160 ~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~----------~~~-----~~~ 224 (239)
T d1wpga3 160 GVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVL----------DDS-----SRF 224 (239)
T ss_dssp HHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCT----------TCG-----GGH
T ss_pred HHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECCcccccccc----------cch-----hhH
Confidence 99999973 1 1134566677776 679999999999999865432110 010 012
Q ss_pred HHhhcCcEEEEEeec
Q 001341 588 QRLEHDLKVLGVTAI 602 (1096)
Q Consensus 588 ~~~e~~l~llG~~~i 602 (1096)
+.+|+||+|+|++||
T Consensus 225 ~~~E~~L~flGlvgi 239 (239)
T d1wpga3 225 MEYETDLTFVGVVGM 239 (239)
T ss_dssp HHHTCSEEEEEEEEE
T ss_pred HHhcCCCEEEEEECC
Confidence 568999999999996
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.79 E-value=2.8e-17 Score=192.10 Aligned_cols=174 Identities=13% Similarity=0.206 Sum_probs=124.3
Q ss_pred ccchhhhhHHHHHHHhHhhhHhHhhhhccCCCChhhhhcCCccccccccCCccCchhHHHHHHHHHHHHHHHHHHhhhhc
Q 001341 826 SGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVY 905 (1096)
Q Consensus 826 ~g~~~~~~~~ll~~n~~~~~lp~~~~~~~~d~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 905 (1096)
....++++.|++|+|++++.+|++++++| ++++++|++||+ ++++.+++..+++.++..+++.++..+...++.+
T Consensus 260 ~~p~pl~~~qILwinli~d~lpaiaL~~e--p~d~~iM~~~Pr---~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~ 334 (472)
T d1wpga4 260 GLPEALIPVQLLWVNLVTDGLPATALGFN--PPDLDIMDRPPR---SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWF 334 (472)
T ss_dssp CCCCSCCHHHHHHHHHTTTHHHHHHHTTC--CCCSGGGGSCCC---CTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCccccHHHHHHHHHHhHHHHHHHHhcC--CCchhhhcCCCC---CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34568999999999999999999998887 599999999994 7788999999999888888888776655544333
Q ss_pred ccccc------------------------------c---ceehhhhhhHHHHHHHHhhhheeecc-h--hHHHHHHHHHH
Q 001341 906 AYEKS------------------------------E---MEEVSMVALSGCIWLQAFVVALETNS-F--TVFQHLAIWGN 949 (1096)
Q Consensus 906 ~~~~~------------------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~ 949 (1096)
.+... . ..++.+.++..+.+++.+.++....+ | ..+.|..++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~rs~~~s~~~~~~~~N~~l~~a 414 (472)
T d1wpga4 335 MYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGS 414 (472)
T ss_dssp TTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHH
T ss_pred HHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHHHHHHHHHHHHHHHHHhcCCcchhhcCccccHHHHHH
Confidence 21100 0 01222333334444445555554333 2 23566777777
Q ss_pred HHHHHHHHHHHhhcCCchhHHHHHHhhc-CHhHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 001341 950 LVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTYR 1007 (1096)
Q Consensus 950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~l~~~~~l~~~~~~k~~~~~~~ 1007 (1096)
+++.+++++++.++|..+ .++++.+ ++..|+.++.+.+++++..++.|++.|+|.
T Consensus 415 v~i~~~l~~~i~yiP~l~---~vf~~~pL~~~~w~i~l~~~~~~~~~~El~K~~~R~~~ 470 (472)
T d1wpga4 415 ICLSMSLHFLILYVDPLP---MIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNYL 470 (472)
T ss_dssp HHHHHHHHHHHHHSTTTH---HHHTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhhHHH---HHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 777777778888888765 3555544 889999999999999999999999987664
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.12 E-value=1.1e-10 Score=121.63 Aligned_cols=174 Identities=15% Similarity=0.200 Sum_probs=105.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCC--CCCeEEEEc-------CCcHH-HHHHHHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE--PKGQLLSID-------GKTED-EVCRSLERVLLT 674 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~--~~~~~~~~~-------~~~~~-~~~~~~~~~~~~ 674 (1096)
.+.+.+.++|++|+++|++++++||+....+..++...++-.+- .++..+... ....+ .....+......
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 57788999999999999999999999999999999998875330 001111111 11111 111112211111
Q ss_pred cccc---CCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChh--hHHHHHHHHHh----cCCeEEEEcCC
Q 001341 675 MRIT---TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDG 745 (1096)
Q Consensus 675 ~~~~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~--qK~~iV~~lk~----~~~~v~~iGDG 745 (1096)
.... ........+..+....+.+ +++.+++...........+.+++|. .|...++.+.+ ..+.|+++|||
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~ 177 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETV-REIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 177 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHH-HHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred ccceeecccceeeEEEecccccHHHH-HHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecC
Confidence 1110 1112222222223333322 2222333221112223344566665 68888887764 24679999999
Q ss_pred ccChhhhhhcCeeEEecCCchHHHHhhcccccccc
Q 001341 746 GNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 746 ~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
.||++|++.|++||+| |++.+.+++.||+|+...
T Consensus 178 ~NDi~ml~~ag~~vav-~na~~~~k~~A~~v~~~~ 211 (230)
T d1wr8a_ 178 ENDLDAFKVVGYKVAV-AQAPKILKENADYVTKKE 211 (230)
T ss_dssp GGGHHHHHHSSEEEEC-TTSCHHHHTTCSEECSSC
T ss_pred ccHHHHHHHCCeEEEE-CCCCHHHHHhCCEEECCC
Confidence 9999999999999999 788788888999998753
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.11 E-value=2.4e-10 Score=122.48 Aligned_cols=173 Identities=18% Similarity=0.214 Sum_probs=111.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCC-----CeE---------EEEcCCcHHHHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPK-----GQL---------LSIDGKTEDEVCRSLER 670 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~-----~~~---------~~~~~~~~~~~~~~~~~ 670 (1096)
++.+.+.++|++|+++||+++++||++...+..+.+++++..+... |.. +.-.....+......+
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~- 99 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK- 99 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH-
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHH-
Confidence 5778899999999999999999999999999999999998765321 111 1111112222222111
Q ss_pred HHHHccc----------------------------------------cCCCCCcEEEEEc-ChhHHHHHHHHHHHHhh-h
Q 001341 671 VLLTMRI----------------------------------------TTSEPKDVAFVVD-GWALEIALKHYRKAFTE-L 708 (1096)
Q Consensus 671 ~~~~~~~----------------------------------------~~~~~~~~~lvi~-g~~l~~~~~~~~~~f~~-l 708 (1096)
....... ...........++ ...++...+.+++.+.. .
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 1111000 0001112223333 33444444444444432 1
Q ss_pred hhccceeEEEeeChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 709 AILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 709 ~~~~~~~i~~r~tP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
........+.+++|. +|+..++.+.+. ...++++|||.||.+|++.|++||+| +|+..+++..||++...
T Consensus 180 ~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am-~na~~~lk~~a~~i~~~ 255 (271)
T d1rkqa_ 180 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV-DNAIPSVKEVANFVTKS 255 (271)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCC
T ss_pred EEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe-CCCCHHHHHhCCEEcCC
Confidence 122233446778887 699999988762 35699999999999999999999999 88888899999998864
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.08 E-value=1.2e-10 Score=124.77 Aligned_cols=172 Identities=17% Similarity=0.195 Sum_probs=111.7
Q ss_pred CCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC--CCCCeEE-------EEcCCcHHHHHHHHHHHHHHccc
Q 001341 607 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLL-------SIDGKTEDEVCRSLERVLLTMRI 677 (1096)
Q Consensus 607 r~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~--~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 677 (1096)
.+.+.++|++|+++|++++++||++...+..+.+++++..+ ..+|..+ .......++....+....+....
T Consensus 22 ~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 101 (269)
T d1rlma_ 22 QPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL 101 (269)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHTCTTC
T ss_pred hHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEEEEeccchHHHHHHHHHHHhhcCc
Confidence 35689999999999999999999999999998888876432 0011112 22222334444434333321100
Q ss_pred c---------------------------------------CCCCCcEEEEEcChhHHHHHHHHHHHHhhhh-hccceeEE
Q 001341 678 T---------------------------------------TSEPKDVAFVVDGWALEIALKHYRKAFTELA-ILSRTAIC 717 (1096)
Q Consensus 678 ~---------------------------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~-~~~~~~i~ 717 (1096)
. .....++.+......+....+.+...+.... .......+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (269)
T d1rlma_ 102 NFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGF 181 (269)
T ss_dssp EEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHHHHHHHHHHTTTSSEEEECSTTE
T ss_pred eEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecCCHHHHHHHHHHHHHHhhcceEEEEEcCce
Confidence 0 0001122333344455555555554443321 22223456
Q ss_pred EeeChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 718 CRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 718 ~r~tP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
.+++|. +|+..++.+.+ . .+.|+++|||.||.+||+.|+.||+| +|+..++++.||++...
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam-~Na~~~lk~~A~~v~~~ 248 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM-GNAAENIKQIARYATDD 248 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC-TTCCHHHHHHCSEECCC
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEe-CCCCHHHHHhCCEEcCC
Confidence 788997 59999998875 2 35799999999999999999999999 88888899999999865
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.07 E-value=4.6e-10 Score=121.16 Aligned_cols=174 Identities=16% Similarity=0.143 Sum_probs=107.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC----------CCCCeEEEEcCCcHHHHHHHHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----------EPKGQLLSIDGKTEDEVCRSLERVLLT 674 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (1096)
.+.+.+.++|++|+++|++++++||++...+..++.++++..+ +..++++.....+.+.+.+.++...+.
T Consensus 18 ~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 97 (285)
T d1nrwa_ 18 QVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRLYHHETIDKKRAYDILSWLESE 97 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCEEEECCCCHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCceeeeccCCHHHHHHHHHHHHHc
Confidence 5678899999999999999999999999999999999987432 111223332222222222211111100
Q ss_pred c--------------------------------------------------------------cccCCCCCcEEEEEcCh
Q 001341 675 M--------------------------------------------------------------RITTSEPKDVAFVVDGW 692 (1096)
Q Consensus 675 ~--------------------------------------------------------------~~~~~~~~~~~lvi~g~ 692 (1096)
- ...........+.....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (285)
T d1nrwa_ 98 NYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSF 177 (285)
T ss_dssp TCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEECS
T ss_pred CCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhhhhhhhhhccccceeechHHHHhhcccchhheeeecccc
Confidence 0 00000111122222222
Q ss_pred hHHHHHHHHHH--HHhhhhhccceeEEEeeChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCeeEEecCC
Q 001341 693 ALEIALKHYRK--AFTELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGR 764 (1096)
Q Consensus 693 ~l~~~~~~~~~--~f~~l~~~~~~~i~~r~tP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 764 (1096)
..+........ ....+........+.+++|. .|+..++.+.+. .+.|+++|||.||.+||+.|+.||+| +|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~s~~~~ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam-~n 256 (285)
T d1nrwa_ 178 FKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM-GN 256 (285)
T ss_dssp CHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC-TT
T ss_pred hHHHHHHHHHHhhcCCCeEEEEeCCcEEEEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEe-CC
Confidence 22222111111 11112222233456788887 799999988762 35799999999999999999999999 88
Q ss_pred chHHHHhhccccccc
Q 001341 765 EGLQAARAADYSIGK 779 (1096)
Q Consensus 765 ~~~~a~~~aD~vl~~ 779 (1096)
+..++++.||++...
T Consensus 257 a~~~~k~~A~~v~~~ 271 (285)
T d1nrwa_ 257 AREDIKSIADAVTLT 271 (285)
T ss_dssp CCHHHHHHCSEECCC
T ss_pred CCHHHHHhCCEEcCC
Confidence 888899999999864
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.99 E-value=1.2e-09 Score=113.53 Aligned_cols=175 Identities=15% Similarity=0.140 Sum_probs=109.3
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCC--CCCeEEEEc------CCcHHHHHHHHHHHHHH
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE--PKGQLLSID------GKTEDEVCRSLERVLLT 674 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~ 674 (1096)
+.++.+++.++++.|++.|++++++||++...+..++...|+-.+- .++..+.-. ....+.....++.....
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 4567889999999999999999999999999999999998874430 001111111 01111222222111111
Q ss_pred ccc-----cCCCCCcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChh--hHHHHHHHHHh-c---CCeEEEEc
Q 001341 675 MRI-----TTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIG 743 (1096)
Q Consensus 675 ~~~-----~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~--qK~~iV~~lk~-~---~~~v~~iG 743 (1096)
... .........+..+....+.+.+...... ........+..+.|. .|+..++.+.+ . ...|+++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~G 174 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRG---FVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIG 174 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTT---EEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcC---cEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeec
Confidence 100 1112223444455555555443322111 111223345666675 79999987764 2 35699999
Q ss_pred CCccChhhhhhcCeeEEecCCchHHHHhhccccccccc
Q 001341 744 DGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 781 (1096)
Q Consensus 744 DG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~ 781 (1096)
||.||.+|++.|++||+| +++...+++.||++....+
T Consensus 175 Ds~nD~~m~~~a~~~vav-~na~~~~k~~ad~v~~~~~ 211 (225)
T d1l6ra_ 175 DSNNDMPMFQLPVRKACP-ANATDNIKAVSDFVSDYSY 211 (225)
T ss_dssp CSGGGHHHHTSSSEEEEC-TTSCHHHHHHCSEECSCCT
T ss_pred CCcchHHHHHHCCeEEEE-CCCcHHHHHhCCEEECCCC
Confidence 999999999999999999 7777788899999876543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.96 E-value=1.2e-09 Score=116.86 Aligned_cols=175 Identities=11% Similarity=0.138 Sum_probs=111.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCC---CCC--------eEEEEcCCcHHHHHHHHHHHH
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE---PKG--------QLLSIDGKTEDEVCRSLERVL 672 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~ 672 (1096)
..+.+.+.++|++++++| +++++||++...+..+..+.+..... .+| ..+.-.....+.+.+.+ +..
T Consensus 18 ~~i~~~~~~al~~l~~~~-~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~i~~~~i~~~~~~~i~-~~~ 95 (267)
T d1nf2a_ 18 LEISEKDRRNIEKLSRKC-YVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDII-EYI 95 (267)
T ss_dssp SCCCHHHHHHHHHHTTTS-EEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEEECCBCHHHHHHHH-HHH
T ss_pred CccCHHHHHHHHHHHcCC-EEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEecccccccccCCCHHHHHHHH-HHH
Confidence 357788999999998755 79999999999999998887753310 011 11111112223232222 221
Q ss_pred HHcccc----------------------------------------CCCCCcEEEEEcChhHHHHHHHHHHHHhhh-hhc
Q 001341 673 LTMRIT----------------------------------------TSEPKDVAFVVDGWALEIALKHYRKAFTEL-AIL 711 (1096)
Q Consensus 673 ~~~~~~----------------------------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l-~~~ 711 (1096)
...... .....+..+..+.+.++.+.+.+.++|... ...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (267)
T d1nf2a_ 96 KPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVF 175 (267)
T ss_dssp GGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred HhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHhhhccceEEEEeccHHHHHHHHHHHHHhhCCcEEEE
Confidence 111000 001112223334445555555566666543 223
Q ss_pred cceeEEEeeChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccccc
Q 001341 712 SRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 781 (1096)
Q Consensus 712 ~~~~i~~r~tP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f~ 781 (1096)
.....+.+++|. .|+..++.+.+ ....|+++|||.||.+||+.|++||+| +|+...+++.||+++.+.+
T Consensus 176 ~~~~~~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~-~na~~~~k~~A~~i~~~~~ 250 (267)
T d1nf2a_ 176 KSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-ENAIEKVKEASDIVTLTNN 250 (267)
T ss_dssp EEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-TTSCHHHHHHCSEECCCTT
T ss_pred EeecceeeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEe-CCCCHHHHHhCCEEcCCCC
Confidence 334566788997 69999988865 235799999999999999999999999 8888889999999987533
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=1.2e-09 Score=112.89 Aligned_cols=131 Identities=21% Similarity=0.311 Sum_probs=92.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
+++|++.++|+.|+++|++++++||.....+..+++.+|+...+ ++. +..
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~----v~a-n~~------------------------- 131 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN----VFA-NRL------------------------- 131 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG----EEE-ECE-------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc----eee-eee-------------------------
Confidence 47899999999999999999999999999999999999984321 110 000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhc--CCeEEEEcCCccChhhhhhcCeeEEec
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC--DYRTLAIGDGGNDVRMIQKADIGVGIS 762 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~--~~~v~~iGDG~ND~~ml~~AdvGIam~ 762 (1096)
.+..+|... ..........+..|+.+++.+++. -+.++++|||.||++|++.||+|||+.
T Consensus 132 -~~~~~G~~~-----------------g~~~~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~ 193 (217)
T d1nnla_ 132 -KFYFNGEYA-----------------GFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFG 193 (217)
T ss_dssp -EECTTSCEE-----------------EECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEEC
T ss_pred -eeeehhccc-----------------cceeeeeeeccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEEC
Confidence 000000000 000000012456799999998753 357999999999999999999999995
Q ss_pred CCch-HHHHhhccccccccchh
Q 001341 763 GREG-LQAARAADYSIGKFRFL 783 (1096)
Q Consensus 763 g~~~-~~a~~~aD~vl~~f~~l 783 (1096)
++.. .++++.||+++.+|..|
T Consensus 194 ~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 194 GNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp SSCCCHHHHHHCSEEESCGGGG
T ss_pred CCHHHHHHHHhCCCEeCCHHHh
Confidence 5543 45667899999887654
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.91 E-value=2.4e-09 Score=115.03 Aligned_cols=174 Identities=14% Similarity=0.132 Sum_probs=110.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC----------------CCCCeEEEEcCCcHHHHHHHH
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----------------EPKGQLLSIDGKTEDEVCRSL 668 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~----------------~~~~~~~~~~~~~~~~~~~~~ 668 (1096)
++.+.+.++|++|+++|++++++||++...+..++.++++... +..+................+
T Consensus 28 ~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (283)
T d2b30a1 28 KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELI 107 (283)
T ss_dssp CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEECTTCCEEEECCCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEEEeeeEEEcCCCcEeeecccCHHHHHHHH
Confidence 4778899999999999999999999999999888876653110 001112222222333333322
Q ss_pred HHHHHHc---cc--------------------------------------cCCCCCcEEEEEcChhHHHHHHHHHHHHhh
Q 001341 669 ERVLLTM---RI--------------------------------------TTSEPKDVAFVVDGWALEIALKHYRKAFTE 707 (1096)
Q Consensus 669 ~~~~~~~---~~--------------------------------------~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~ 707 (1096)
+.....- .. ......+..+..+...++.+.+.+++.+..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (283)
T d2b30a1 108 SYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKN 187 (283)
T ss_dssp HHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEEEECCCTTTHHHHHHHHHHHSTT
T ss_pred HHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccccccccHHHHhhcccceEEEEecCHHHHHHHHHHHHHHhcc
Confidence 2221100 00 001112233334445666666666665542
Q ss_pred hh-hccceeEEEeeChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhccccccc
Q 001341 708 LA-ILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 779 (1096)
Q Consensus 708 l~-~~~~~~i~~r~tP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~ 779 (1096)
.. .......+.+++|. .|+..++.+.+ ..+.|+++|||.||.+|++.|++||+| +++..++++.||++...
T Consensus 188 ~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~-~na~~~~k~~a~~v~~~ 265 (283)
T d2b30a1 188 KLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV-ANATDSAKSHAKCVLPV 265 (283)
T ss_dssp TEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC-TTCCHHHHHHSSEECSS
T ss_pred cceEEEecceeEeecCCcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEe-CCCCHHHHHhCCEEECC
Confidence 21 11222335667776 58888887765 246799999999999999999999999 88888899999999863
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.84 E-value=2.5e-09 Score=113.74 Aligned_cols=65 Identities=31% Similarity=0.473 Sum_probs=54.7
Q ss_pred eEEEeeChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEecCCchHHHHhhcccccccc
Q 001341 715 AICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 780 (1096)
Q Consensus 715 ~i~~r~tP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~~f 780 (1096)
..+.+++|. .|+..++.+.+ ..+.++++|||.||++||+.|+.||+| +|+...+++.||++....
T Consensus 175 ~~~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav-~na~~~lk~~A~~vt~~~ 245 (260)
T d2rbka1 175 PAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVKAAADYVTAPI 245 (260)
T ss_dssp TTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCCG
T ss_pred CcEEEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEe-CCCCHHHHHhCCEEeCCC
Confidence 345778886 69999988865 346799999999999999999999999 888888999999987643
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.73 E-value=1.5e-08 Score=100.19 Aligned_cols=112 Identities=18% Similarity=0.155 Sum_probs=84.3
Q ss_pred HHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Q 001341 612 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 691 (1096)
Q Consensus 612 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 691 (1096)
.+|+.|++.|+.+.++||+....+...+.++++...
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~~-------------------------------------------- 74 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF-------------------------------------------- 74 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE--------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhccccc--------------------------------------------
Confidence 379999999999999999999999999999887310
Q ss_pred hhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCeeEEecCCchH
Q 001341 692 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 767 (1096)
Q Consensus 692 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~ 767 (1096)
-.....|...++.+.+ ..+.|+++||+.||.+||+.|++|+++ +++..
T Consensus 75 ---------------------------~~~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap-~nA~~ 126 (177)
T d1k1ea_ 75 ---------------------------FLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV-ADAPI 126 (177)
T ss_dssp ---------------------------EESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCH
T ss_pred ---------------------------ccccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEc-CCccH
Confidence 0122344444444332 347899999999999999999999999 88888
Q ss_pred HHHhhccccccc------cchhhhHH-Hhhchhhh
Q 001341 768 QAARAADYSIGK------FRFLKRLI-LVHGRYSY 795 (1096)
Q Consensus 768 ~a~~~aD~vl~~------f~~l~~ll-l~~GR~~~ 795 (1096)
.+++.||||+.. .+-+..++ -..|+|.+
T Consensus 127 ~vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~~~ 161 (177)
T d1k1ea_ 127 YVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 161 (177)
T ss_dssp HHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHhCCEEeCCCCCCchHHHHHHHHHHHCCChHH
Confidence 899999999964 22233333 34677654
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.70 E-value=3.2e-08 Score=103.39 Aligned_cols=44 Identities=11% Similarity=0.083 Sum_probs=39.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 646 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 646 (1096)
.+...+.++++|++|+++|++++++|||+...+..+.+.+++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 45566789999999999999999999999999999999999753
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=1.8e-07 Score=96.43 Aligned_cols=42 Identities=7% Similarity=0.069 Sum_probs=38.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
..+.+.+.++|++|+++|+.++++|||+...+..+..++++-
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 347789999999999999999999999999999999999974
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.51 E-value=1.6e-07 Score=98.18 Aligned_cols=166 Identities=14% Similarity=0.187 Sum_probs=98.2
Q ss_pred HHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCC----CCeEEEEcCCcHHHHHHHH---------HHHHHHcc--
Q 001341 612 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP----KGQLLSIDGKTEDEVCRSL---------ERVLLTMR-- 676 (1096)
Q Consensus 612 ~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~----~~~~~~~~~~~~~~~~~~~---------~~~~~~~~-- 676 (1096)
+++.++++.|+.+.++||+....+..+.++.++..++. ++..+.............+ ....+...
T Consensus 25 ~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (244)
T d1s2oa1 25 QEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEAL 104 (244)
T ss_dssp HHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTCTTE
T ss_pred HHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhcccc
Confidence 45566788999999999999999999999999866531 1112222212111111111 11111110
Q ss_pred -c---cCCCCCcEEEEEcChhHHHHHHHHHHHHhhh----hhccceeEEEeeChh--hHHHHHHHHHhc----CCeEEEE
Q 001341 677 -I---TTSEPKDVAFVVDGWALEIALKHYRKAFTEL----AILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAI 742 (1096)
Q Consensus 677 -~---~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l----~~~~~~~i~~r~tP~--qK~~iV~~lk~~----~~~v~~i 742 (1096)
. ......+......-...+...+.+.+.+... .......-+.++.|. .|+..++.+.+. ...|+++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v~~ 184 (244)
T d1s2oa1 105 KPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTLVC 184 (244)
T ss_dssp EECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred cccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhEEEE
Confidence 0 0111222333333233333333333333221 111112224566665 699999988763 2569999
Q ss_pred cCCccChhhhhhcCeeEEecCCchHHHHhhcccccc
Q 001341 743 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG 778 (1096)
Q Consensus 743 GDG~ND~~ml~~AdvGIam~g~~~~~a~~~aD~vl~ 778 (1096)
|||.||.+||+.|+.||+| +|+...+++.||.+..
T Consensus 185 GD~~ND~~Ml~~~~~~vav-~na~~~lk~~a~~~~~ 219 (244)
T d1s2oa1 185 GDSGNDIGLFETSARGVIV-RNAQPELLHWYDQWGD 219 (244)
T ss_dssp ECSGGGHHHHTSSSEEEEC-TTCCHHHHHHHHHHCC
T ss_pred cCCCCCHHHHhhCCcEEEe-CCCCHHHHHHhhcccc
Confidence 9999999999999999999 8888888888886543
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.45 E-value=2.4e-07 Score=93.54 Aligned_cols=127 Identities=23% Similarity=0.232 Sum_probs=86.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
+..++....++.+ +.+.+..++|+.............++...... ......
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~l~~~~-------------------------- 119 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDD-------------------------- 119 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEE--EEEECT--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcc--eeeeec--------------------------
Confidence 4566777777665 57899999999999999888888887432111 000000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 764 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 764 (1096)
...........+..+...++.++...+.|+|+|||.||++|++.||+|||| ++
T Consensus 120 --------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na 172 (206)
T d1rkua_ 120 --------------------------SDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HA 172 (206)
T ss_dssp --------------------------TSCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SC
T ss_pred --------------------------ccccccccccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE-CC
Confidence 011222233344455667777777889999999999999999999999999 55
Q ss_pred chHHHHh-hccccc-cccchhhhHHH
Q 001341 765 EGLQAAR-AADYSI-GKFRFLKRLIL 788 (1096)
Q Consensus 765 ~~~~a~~-~aD~vl-~~f~~l~~lll 788 (1096)
. .++++ ++||+. .++..+...++
T Consensus 173 ~-~~v~~~~~~~~~~~~~~d~~~~~~ 197 (206)
T d1rkua_ 173 P-ENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp C-HHHHHHCTTSCEECSHHHHHHHHH
T ss_pred C-HHHHHhCCCceeecCHHHHHHHHH
Confidence 4 45555 779876 45666665543
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.43 E-value=1.3e-07 Score=97.54 Aligned_cols=135 Identities=14% Similarity=0.150 Sum_probs=92.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.+.++.|+++|+++.++||-....+..+.+.+|+...-... ....++....
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an-~~~~~~~~~~---------------------- 131 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCN-HASFDNDYIH---------------------- 131 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEE-EEECSSSBCE----------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeee-eEEEeCCcce----------------------
Confidence 47899999999999999999999999999999999988874321000 0000000000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEecCC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 764 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 764 (1096)
..+ .......++...|..|..+++.++..++.|+++||+.||++|.++||+++++ +.
T Consensus 132 ----~~~------------------~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~-~~ 188 (226)
T d2feaa1 132 ----IDW------------------PHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR-DY 188 (226)
T ss_dssp ----EEC------------------TTCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC-HH
T ss_pred ----ecc------------------ccccccccccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEe-cc
Confidence 000 0001223345678889999999988889999999999999999999999998 44
Q ss_pred chHHHHh-hcc-ccccccchhhh
Q 001341 765 EGLQAAR-AAD-YSIGKFRFLKR 785 (1096)
Q Consensus 765 ~~~~a~~-~aD-~vl~~f~~l~~ 785 (1096)
....+.+ ..+ ..+.+|+.+..
T Consensus 189 ~~~~~~~~~~~~~~~~d~~~i~~ 211 (226)
T d2feaa1 189 LLNECREQNLNHLPYQDFYEIRK 211 (226)
T ss_dssp HHHHHHHTTCCEECCSSHHHHHH
T ss_pred hHHHHHHcCCCeeecCCHHHHHH
Confidence 4444444 233 34455555544
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.27 E-value=1.3e-06 Score=88.11 Aligned_cols=123 Identities=23% Similarity=0.243 Sum_probs=83.0
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 682 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1096)
..++.+++.+.++.++..|..+.++||.....+.....+.+....-.. ....+
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------------- 125 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVK------------------------- 125 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEE-------------------------
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhh--hhccc-------------------------
Confidence 347889999999999999999999999999999888888776321100 00000
Q ss_pred CcEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEee--ChhhHHHHHHHHH----hcCCeEEEEcCCccChhhhhhcC
Q 001341 683 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV--TPSQKAQLVELLK----SCDYRTLAIGDGGNDVRMIQKAD 756 (1096)
Q Consensus 683 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~--tP~qK~~iV~~lk----~~~~~v~~iGDG~ND~~ml~~Ad 756 (1096)
++ ......... .+..|...++.+. ...+.++++|||.||++|++.||
T Consensus 126 -------~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag 178 (210)
T d1j97a_ 126 -------DG--------------------KLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAG 178 (210)
T ss_dssp -------TT--------------------EEEEEEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCS
T ss_pred -------cc--------------------cccccccccccccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCC
Confidence 00 000011111 1123333333332 23567999999999999999999
Q ss_pred eeEEecCCchHHHHhhccccccccc
Q 001341 757 IGVGISGREGLQAARAADYSIGKFR 781 (1096)
Q Consensus 757 vGIam~g~~~~~a~~~aD~vl~~f~ 781 (1096)
+|||| ++...++..||+++...+
T Consensus 179 ~~va~--na~~~lk~~Ad~vi~~~d 201 (210)
T d1j97a_ 179 LKIAF--CAKPILKEKADICIEKRD 201 (210)
T ss_dssp EEEEE--SCCHHHHTTCSEEECSSC
T ss_pred CCEEE--CCCHHHHHhCCEEEcCCC
Confidence 99999 344567889999997544
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.07 E-value=1.6e-06 Score=88.97 Aligned_cols=65 Identities=12% Similarity=0.214 Sum_probs=50.1
Q ss_pred ceeEEEeeChh--hHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEec-CCchHHHHhhccccccccch
Q 001341 713 RTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS-GREGLQAARAADYSIGKFRF 782 (1096)
Q Consensus 713 ~~~i~~r~tP~--qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~-g~~~~~a~~~aD~vl~~f~~ 782 (1096)
+...+.+++|. +|+..++.+.+. ..++++||+.||.+|++.|+.|++|. |+. ...|++.+.+-..
T Consensus 146 ~~~~~idi~p~g~~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av~~g~~----~~~A~~~~~~~~e 213 (229)
T d1u02a_ 146 YGKMIIELRVPGVNKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIE 213 (229)
T ss_dssp ECSSEEEEECTTCCHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHH
T ss_pred eeceEEEEecCCCCHHHHHHHHhcc-ccceeecCCCChHHHHhccCCeEEEEeCCC----CccCeEEcCCHHH
Confidence 34557888887 699999999865 56889999999999999997777662 432 3478888876444
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.96 E-value=4.2e-06 Score=86.25 Aligned_cols=64 Identities=19% Similarity=0.244 Sum_probs=52.9
Q ss_pred eeEEEeeChh--hHHHHHHHHHh-cCCeEEEEcC----CccChhhhhhcC-eeEEecCCchHHHHhhcccccc
Q 001341 714 TAICCRVTPS--QKAQLVELLKS-CDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAADYSIG 778 (1096)
Q Consensus 714 ~~i~~r~tP~--qK~~iV~~lk~-~~~~v~~iGD----G~ND~~ml~~Ad-vGIam~g~~~~~a~~~aD~vl~ 778 (1096)
...+.+++|. .|+..++.|.+ ..+.|+++|| |.||.+|+++|+ .|++| +|+.+.++..+|++++
T Consensus 173 ~~~~lei~~~~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av-~na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 173 GMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFP 244 (244)
T ss_dssp SSSCEEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCT
T ss_pred cCccceecchhccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEc-CCHHHHHHHHHHhcCC
Confidence 3455688887 69999999876 4568999999 569999999997 79999 8888778889998864
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.47 E-value=3.8e-05 Score=78.84 Aligned_cols=59 Identities=20% Similarity=0.318 Sum_probs=43.9
Q ss_pred EEEeeChh--hHHHHHHHHHh-cCCeEEEEcC----CccChhhhhhcC-eeEEecCCchHHHHhhcccc
Q 001341 716 ICCRVTPS--QKAQLVELLKS-CDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAADYS 776 (1096)
Q Consensus 716 i~~r~tP~--qK~~iV~~lk~-~~~~v~~iGD----G~ND~~ml~~Ad-vGIam~g~~~~~a~~~aD~v 776 (1096)
.+.+++|. +|+..++.|.+ ..+.|+++|| |.||.+||+.|+ .|+++ +..+++++.++.+
T Consensus 175 ~~lei~~~~vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v--~~~~~~~~~~~~l 241 (243)
T d2amya1 175 ISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV--TAPEDTRRICELL 241 (243)
T ss_dssp TEEEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC--SSHHHHHHHHHHH
T ss_pred ccceeeccccCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEe--CCHHHHHHHHHHH
Confidence 45677776 69988887765 4578999999 889999999998 67777 3356777776643
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.31 E-value=9.4e-05 Score=74.93 Aligned_cols=125 Identities=20% Similarity=0.241 Sum_probs=82.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
.++.|+++++++.|++.|+++.++||.....+..+...+||...-.. ++... +
T Consensus 94 ~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~--~~~~~--~----------------------- 146 (224)
T d2hsza1 94 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--MLGGQ--S----------------------- 146 (224)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EECTT--T-----------------------
T ss_pred cchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccc--ccccc--c-----------------------
Confidence 35689999999999999999999999999999999999998432111 10000 0
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCe-eEEec
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGIS 762 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv-GIam~ 762 (1096)
.-...-.|+--..+.+.++-....+++|||+.+|+.+-+.|++ .|.+.
T Consensus 147 -------------------------------~~~~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~ 195 (224)
T d2hsza1 147 -------------------------------LPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLT 195 (224)
T ss_dssp -------------------------------SSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred -------------------------------cccccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEe
Confidence 0000011222223344444456789999999999999999997 44552
Q ss_pred -C-CchHHHHh-hccccccccchhhhH
Q 001341 763 -G-REGLQAAR-AADYSIGKFRFLKRL 786 (1096)
Q Consensus 763 -g-~~~~~a~~-~aD~vl~~f~~l~~l 786 (1096)
| +....... .+|+++.+++.|..+
T Consensus 196 ~g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 196 YGYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp SSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred CCCCCcchhhhcCCCEEECCHHHHHHh
Confidence 1 11112223 589999988877664
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.26 E-value=0.00023 Score=71.73 Aligned_cols=122 Identities=13% Similarity=0.101 Sum_probs=80.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.|++.++++.|+++|+++.++||.....+..+.+..|+...-.. ++..+.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~--i~~~~~-------------------------- 139 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDA--LASAEK-------------------------- 139 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEECTT--------------------------
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccc--cccccc--------------------------
Confidence 4569999999999999999999999999999999999999432110 111000
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeE-EecC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GISG 763 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am~g 763 (1096)
.-.++-.|.-=..+++.+.-..+.+++|||+.+|+.|-+.|++.. ++.+
T Consensus 140 ------------------------------~~~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~ 189 (218)
T d1te2a_ 140 ------------------------------LPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPA 189 (218)
T ss_dssp ------------------------------SSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred ------------------------------cccchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECC
Confidence 000001111112334444434578999999999999999999755 4422
Q ss_pred Cch-HHHH-hhccccccccchhh
Q 001341 764 REG-LQAA-RAADYSIGKFRFLK 784 (1096)
Q Consensus 764 ~~~-~~a~-~~aD~vl~~f~~l~ 784 (1096)
... .+.. ..||+++.+++.|.
T Consensus 190 ~~~~~~~~~~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 190 PEAQNDPRFVLANVKLSSLTELT 212 (218)
T ss_dssp TTTTTCGGGGGSSEECSCGGGCC
T ss_pred CCCccchhhcCCCEEECChhhCC
Confidence 221 1222 36899988877653
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.16 E-value=0.0004 Score=70.51 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=81.1
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 605 RLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aG-Ikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
++-||+.++++.|++.| +++.++||.....+..+.+..|+...-+. ++.-+..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~--i~~~~~~------------------------ 144 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF--GAFADDA------------------------ 144 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC--EECTTTC------------------------
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccc--ccccccc------------------------
Confidence 45689999999999987 89999999999999999999998543221 1100000
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhH----HHHHHHHHh---cCCeEEEEcCCccChhhhhhcC
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK----AQLVELLKS---CDYRTLAIGDGGNDVRMIQKAD 756 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK----~~iV~~lk~---~~~~v~~iGDG~ND~~ml~~Ad 756 (1096)
..+..+ ...++.+.. ..+.++||||+.+|+.|-+.|+
T Consensus 145 ------------------------------------~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG 188 (228)
T d2hcfa1 145 ------------------------------------LDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELD 188 (228)
T ss_dssp ------------------------------------SSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTT
T ss_pred ------------------------------------ccccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcC
Confidence 011111 112222322 2367999999999999999999
Q ss_pred eeE-Eec-CCchH-HHHh-hccccccccchhhhHH
Q 001341 757 IGV-GIS-GREGL-QAAR-AADYSIGKFRFLKRLI 787 (1096)
Q Consensus 757 vGI-am~-g~~~~-~a~~-~aD~vl~~f~~l~~ll 787 (1096)
+.. ++. |.... +... .+|+++.++..+..++
T Consensus 189 ~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l 223 (228)
T d2hcfa1 189 ARSIAVATGNFTMEELARHKPGTLFKNFAETDEVL 223 (228)
T ss_dssp CEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred CEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHH
Confidence 653 332 44333 3333 6899999988887764
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.90 E-value=0.0013 Score=68.85 Aligned_cols=43 Identities=12% Similarity=0.268 Sum_probs=40.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 647 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~ 647 (1096)
++|+|+++.++.|++.|+.+.++||--...+..++++.|+..+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ 177 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHS 177 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBT
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCcc
Confidence 4899999999999999999999999999999999999998654
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.81 E-value=0.0011 Score=68.62 Aligned_cols=43 Identities=26% Similarity=0.289 Sum_probs=38.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 646 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 646 (1096)
.++.+|+.++++.|++.|+++.++||.....+..+.+..|+..
T Consensus 98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~ 140 (257)
T d1swva_ 98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG 140 (257)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT
T ss_pred CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcc
Confidence 3688999999999999999999999999999988888888743
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.60 E-value=0.0015 Score=64.96 Aligned_cols=117 Identities=17% Similarity=0.142 Sum_probs=80.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
.++.+++.+.++.++..| ++.++|+.....+..+....|+...-+
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd---------------------------------- 127 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFD---------------------------------- 127 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccc----------------------------------
Confidence 467899999999998775 899999999999999999999843211
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCe-e
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADI-G 758 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~Adv-G 758 (1096)
.++.+.-.+..|..+.+...+ ..+.+++|||+.+|+.|-+.|++ .
T Consensus 128 ------------------------------~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~ 177 (210)
T d2ah5a1 128 ------------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQK 177 (210)
T ss_dssp ------------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred ------------------------------ccccccccccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeE
Confidence 122222233334333333322 34679999999999999999998 5
Q ss_pred EEec-CC-chHHHHh-hccccccccchhhh
Q 001341 759 VGIS-GR-EGLQAAR-AADYSIGKFRFLKR 785 (1096)
Q Consensus 759 Iam~-g~-~~~~a~~-~aD~vl~~f~~l~~ 785 (1096)
|++. |. ...+... .+|+++.++..|..
T Consensus 178 i~v~~g~~~~~~l~~~~pd~vi~~l~el~~ 207 (210)
T d2ah5a1 178 LAITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp EEESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred EEEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 5662 32 2333444 48999887665543
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.41 E-value=0.0019 Score=59.71 Aligned_cols=105 Identities=21% Similarity=0.284 Sum_probs=74.6
Q ss_pred cCCccHHHHHHHHHhcCeEEeeeCCcEEEEEeCCeeEEEEEEEEeccCCCCceeEEEEEeCCCCeEEEEecChhhhhhhh
Q 001341 446 AQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPY 525 (1096)
Q Consensus 446 ~~sp~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~~~il~~ 525 (1096)
++||...|++++|++.+....... .+.-...+||+..++...+.+ +|+ .+..|++..+...
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~g~~~----~g~--~v~~G~~~~~~~~ 89 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERDV-------------QSLHATFVPFTAQSRMSGINI----DNR--MIRKGSVDAIRRH 89 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCCT-------------TTTTCEEEEEETTTTEEEEEE----TTE--EEEEECHHHHHHH
T ss_pred CCchHHHHHHHHHHHhcCCCcccc-------------ccccccccccccccceEEEEE----CCE--EEEecHHHHHHHH
Confidence 689999999999998754321110 111123456666665544443 343 4667999888776
Q ss_pred hcc--CCchHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhhcCcEEEEEeecc
Q 001341 526 AHA--GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIE 603 (1096)
Q Consensus 526 ~~~--~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~l~llG~~~ie 603 (1096)
+.. ...+..+.+.+++++.+|.+++.+| .|-.++|++++.
T Consensus 90 ~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va--------------------------------------~d~~~~G~i~l~ 131 (136)
T d2a29a1 90 VEANGGHFPTDVDQKVDQVARQGATPLVVV--------------------------------------EGSRVLGVIALK 131 (136)
T ss_dssp HHHHTCCCCHHHHHHHHHHHHTTSEEEEEE--------------------------------------ETTEEEEEEEEE
T ss_pred HHHcCCCCcHHHHHHHHHHHHCCCeEEEEE--------------------------------------ECCEEEEEEEEE
Confidence 543 3345788899999999999999999 677999999999
Q ss_pred ccCC
Q 001341 604 DRLQ 607 (1096)
Q Consensus 604 D~lr 607 (1096)
|++|
T Consensus 132 D~iK 135 (136)
T d2a29a1 132 DIVK 135 (136)
T ss_dssp ESSC
T ss_pred eecC
Confidence 9986
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.30 E-value=0.0078 Score=58.42 Aligned_cols=59 Identities=24% Similarity=0.314 Sum_probs=40.4
Q ss_pred HHHHHhcCCeEEEEcCCccChhhhhhcCee--EEe-cCCchH-HHHhhccccccccchhhhHH
Q 001341 729 VELLKSCDYRTLAIGDGGNDVRMIQKADIG--VGI-SGREGL-QAARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 729 V~~lk~~~~~v~~iGDG~ND~~ml~~AdvG--Iam-~g~~~~-~a~~~aD~vl~~f~~l~~ll 787 (1096)
++.+.-..+.++||||..+|+.|=+.|+++ +.+ .|.... .....||+++.++..+..++
T Consensus 118 ~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~i 180 (182)
T d2gmwa1 118 RDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 180 (182)
T ss_dssp HHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred hhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHHh
Confidence 333333446799999999999999999995 334 343322 23346999999877766543
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.27 E-value=0.0018 Score=64.17 Aligned_cols=117 Identities=18% Similarity=0.179 Sum_probs=72.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.||++++++.|++.|+++.++|+... .+..+.+..|+...-. .
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~---~------------------------------- 126 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFT---E------------------------------- 126 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEE---E-------------------------------
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccc---c-------------------------------
Confidence 5679999999999999999999998654 5666778888732100 0
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeE-EecC
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GISG 763 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am~g 763 (1096)
++.+. .....+-.|+--..+++.+.-..+.+++|||+.+|+.+-+.|++.. ++ .
T Consensus 127 ---i~~s~---------------------~~~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v-~ 181 (204)
T d2go7a1 127 ---ILTSQ---------------------SGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF-L 181 (204)
T ss_dssp ---EECGG---------------------GCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEES-S
T ss_pred ---ccccc---------------------cccccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEE-c
Confidence 00000 0000011222223344444434578999999999999999999854 44 2
Q ss_pred CchHHHHhhccccccccchhhh
Q 001341 764 REGLQAARAADYSIGKFRFLKR 785 (1096)
Q Consensus 764 ~~~~~a~~~aD~vl~~f~~l~~ 785 (1096)
... ..+|+.+.+...+..
T Consensus 182 ~~~----~~~~~~~~~~~dl~~ 199 (204)
T d2go7a1 182 EST----YEGNHRIQALADISR 199 (204)
T ss_dssp CCS----CTTEEECSSTTHHHH
T ss_pred CCC----CCcCeecCCHHHHHH
Confidence 221 235666655555544
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.14 E-value=0.0013 Score=65.43 Aligned_cols=120 Identities=17% Similarity=0.164 Sum_probs=75.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.||+.++++.|+ +++++.++|+.....+..+.+..|+...-.
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~----------------------------------- 125 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRMA----------------------------------- 125 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGEE-----------------------------------
T ss_pred ccccchhhhhhhhc-cccccccccccccccccccccccccccccc-----------------------------------
Confidence 46699999999997 579999999999999999998888743110
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEe--c
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI--S 762 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam--~ 762 (1096)
.++.+.. .-...-.|.--..+++.++-..+.+++|||+.+|+.+-++|++.... .
T Consensus 126 --~i~~~~~---------------------~~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~ 182 (207)
T d2hdoa1 126 --VTISADD---------------------TPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVW 182 (207)
T ss_dssp --EEECGGG---------------------SSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGG
T ss_pred --ccccccc---------------------cccchhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEec
Confidence 0000000 00000012222333333332346799999999999999999998743 2
Q ss_pred CCchHHHHhhccccccccchh
Q 001341 763 GREGLQAARAADYSIGKFRFL 783 (1096)
Q Consensus 763 g~~~~~a~~~aD~vl~~f~~l 783 (1096)
|.........+|+++.++..+
T Consensus 183 g~~~~~~~~~~~~~i~~l~dl 203 (207)
T d2hdoa1 183 GMDPNADHQKVAHRFQKPLDI 203 (207)
T ss_dssp GCCTTGGGSCCSEEESSGGGG
T ss_pred CCCChhHhhhcCcEeCCHHHH
Confidence 333333334678887665443
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.08 E-value=0.0052 Score=61.95 Aligned_cols=118 Identities=11% Similarity=0.095 Sum_probs=77.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
++.||+.++++.|+ +|+++.++|+........+.+.+|+...-+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd----------------------------------- 143 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFD----------------------------------- 143 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCS-----------------------------------
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccc-----------------------------------
Confidence 46799999999996 589999999998888888999999843211
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEe----eChhh--HHHHHHHHHhcCCeEEEEcCC-ccChhhhhhcCe
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR----VTPSQ--KAQLVELLKSCDYRTLAIGDG-GNDVRMIQKADI 757 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r----~tP~q--K~~iV~~lk~~~~~v~~iGDG-~ND~~ml~~Adv 757 (1096)
.++++. .-|.- =..+++.+.-....+++|||. .+|+.+-+.|++
T Consensus 144 -----------------------------~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~ 194 (230)
T d1x42a1 144 -----------------------------SITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGM 194 (230)
T ss_dssp -----------------------------EEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTC
T ss_pred -----------------------------cccccccccccchhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCC
Confidence 111110 01111 112233333244679999997 689999999888
Q ss_pred eE-Eec-CCchHHHHhhccccccccchhhhHH
Q 001341 758 GV-GIS-GREGLQAARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 758 GI-am~-g~~~~~a~~~aD~vl~~f~~l~~ll 787 (1096)
-. .+. +....+....+|+++.+++.|..++
T Consensus 195 ~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l 226 (230)
T d1x42a1 195 TSILLDRKGEKREFWDKCDFIVSDLREVIKIV 226 (230)
T ss_dssp EEEEECTTSCCGGGGGGSSEEESSTTHHHHHH
T ss_pred EEEEECCCCCCcccccCCCEEECCHHHHHHHH
Confidence 54 231 2222233447899999988776553
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.95 E-value=0.0058 Score=61.90 Aligned_cols=122 Identities=15% Similarity=0.155 Sum_probs=77.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
-.+.|++.+++++|+++|+++.++|+............+|+..-.... ....+
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~-~~~~d-------------------------- 178 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV-DGHFD-------------------------- 178 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC-SEEEC--------------------------
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhc-ceeec--------------------------
Confidence 456899999999999999999999999999888888888874321110 00000
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEEe--
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI-- 761 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam-- 761 (1096)
.....+-.|.-=....+.+.-..+.+++|||..+|+.+=++|++-...
T Consensus 179 ------------------------------~~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~ 228 (253)
T d1zs9a1 179 ------------------------------TKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVV 228 (253)
T ss_dssp ------------------------------GGGCCTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred ------------------------------cccccCCCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEe
Confidence 000001111111223333433457899999999999999999986543
Q ss_pred -cCCchH-HHHhhccccccccch
Q 001341 762 -SGREGL-QAARAADYSIGKFRF 782 (1096)
Q Consensus 762 -~g~~~~-~a~~~aD~vl~~f~~ 782 (1096)
.|+... +....++.+|.++.-
T Consensus 229 r~g~~~~~~~~~~~~~~i~sl~E 251 (253)
T d1zs9a1 229 RPGNAGLTDDEKTYYSLITSFSE 251 (253)
T ss_dssp CTTCCCCCHHHHHHSCEESSGGG
T ss_pred CCCCCCCchhhcCCCcEECChHH
Confidence 244332 233466777776543
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.33 E-value=0.0079 Score=57.23 Aligned_cols=40 Identities=20% Similarity=0.258 Sum_probs=30.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcH-hHHHHHHHHcCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQ-NTAIQIALSCNF 644 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~-~ta~~ia~~~gl 644 (1096)
++.|++.++++.|+++|+++.++|+-+. ..+...-+..++
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~ 86 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDL 86 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccc
Confidence 5789999999999999999999997544 444444455444
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.29 E-value=0.0097 Score=60.46 Aligned_cols=117 Identities=19% Similarity=0.222 Sum_probs=76.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCcE
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 685 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (1096)
+.|++.++++.|+ .|++++++|+..........+.+|+...-+. +
T Consensus 110 ~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~--i-------------------------------- 154 (247)
T d2gfha1 110 LADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDA--I-------------------------------- 154 (247)
T ss_dssp CCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSE--E--------------------------------
T ss_pred cCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccccc--c--------------------------------
Confidence 6789999999998 4899999999998888898999998433211 1
Q ss_pred EEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhH------HHHHHHHHhcCCeEEEEcCCc-cChhhhhhcCee
Q 001341 686 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIG 758 (1096)
Q Consensus 686 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK------~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~AdvG 758 (1096)
+++.-.+..| ..+.+.+.-..+.+++|||.. +|+.+-+.|++.
T Consensus 155 ------------------------------~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~ 204 (247)
T d2gfha1 155 ------------------------------VIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLK 204 (247)
T ss_dssp ------------------------------EEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCS
T ss_pred ------------------------------ccccccccchhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCe
Confidence 1111111112 123333332346799999995 899999999996
Q ss_pred -EEecCCch---HHHHhhccccccccchhhhHH
Q 001341 759 -VGISGREG---LQAARAADYSIGKFRFLKRLI 787 (1096)
Q Consensus 759 -Iam~g~~~---~~a~~~aD~vl~~f~~l~~ll 787 (1096)
+......+ ......+|+++.+..-|..++
T Consensus 205 ~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll 237 (247)
T d2gfha1 205 ATVWINKSGRVPLTSSPMPHYMVSSVLELPALL 237 (247)
T ss_dssp EEEEECTTCCCCSSCCCCCSEEESSGGGHHHHH
T ss_pred EEEEECCCCCCcccccCCCCEEECCHHHHHHHH
Confidence 54322111 111225789998877777654
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.26 E-value=0.025 Score=54.69 Aligned_cols=40 Identities=15% Similarity=0.344 Sum_probs=33.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 645 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~ 645 (1096)
++.+|+++.++.|++.|+++.++|+.... +..+.+..|+.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~-~~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQ-VLEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccc-hhhhhhhhccc
Confidence 56799999999999999999999997654 44567777773
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=94.96 E-value=0.019 Score=58.54 Aligned_cols=45 Identities=13% Similarity=0.206 Sum_probs=33.3
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECC---CcHhHHHHHHHHcCCCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFISP 647 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTG---D~~~ta~~ia~~~gl~~~ 647 (1096)
.+.+=+++.++|+.|+++|++++++|+ +........-+++|+..+
T Consensus 17 ~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~ 64 (250)
T d2c4na1 17 DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64 (250)
T ss_dssp TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCC
T ss_pred CCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccccc
Confidence 344457899999999999999999985 445555555567787433
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=94.92 E-value=0.044 Score=56.05 Aligned_cols=43 Identities=21% Similarity=0.242 Sum_probs=32.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCC---cHhHHHHHHHHcCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGD---KQNTAIQIALSCNFIS 646 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD---~~~ta~~ia~~~gl~~ 646 (1096)
+++=+++.++|+.|+++|++++++|+. ..........++|+..
T Consensus 22 ~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~ 67 (261)
T d1vjra_ 22 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 67 (261)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhcccc
Confidence 344489999999999999999999854 4455555566778743
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.76 E-value=0.0096 Score=61.01 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=29.9
Q ss_pred CCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHc
Q 001341 607 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 642 (1096)
Q Consensus 607 r~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~ 642 (1096)
=+++.++|+.|+++|++++++|+....+...++..+
T Consensus 20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 378899999999999999999988777776666543
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.63 E-value=0.0062 Score=56.76 Aligned_cols=30 Identities=17% Similarity=0.211 Sum_probs=27.9
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcH
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQ 632 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~ 632 (1096)
+|++.|++.+.++.|+++|+++.++||++.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRES 63 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcH
Confidence 578999999999999999999999999964
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=93.68 E-value=0.027 Score=55.88 Aligned_cols=42 Identities=14% Similarity=0.211 Sum_probs=34.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCC
Q 001341 603 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 646 (1096)
Q Consensus 603 eD~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 646 (1096)
..++-||+.+.++.|++.|+++.++|+... +.......|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 456789999999999999999999999754 566777778743
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=93.55 E-value=0.058 Score=54.85 Aligned_cols=60 Identities=15% Similarity=0.179 Sum_probs=38.5
Q ss_pred hhhHHHHHHHHHhcCCeEEEEcCCcc-ChhhhhhcCe-eEEe-cCCc-hHHHHhh---ccccccccc
Q 001341 722 PSQKAQLVELLKSCDYRTLAIGDGGN-DVRMIQKADI-GVGI-SGRE-GLQAARA---ADYSIGKFR 781 (1096)
Q Consensus 722 P~qK~~iV~~lk~~~~~v~~iGDG~N-D~~ml~~Adv-GIam-~g~~-~~~a~~~---aD~vl~~f~ 781 (1096)
|.--..+.+.++-..+.++||||..+ |+.+-++|++ +|.+ +|.. ..+.... .|+++.++.
T Consensus 183 p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~ 249 (253)
T d1wvia_ 183 AVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLA 249 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGG
T ss_pred cccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHH
Confidence 33333445555445578999999976 9999999999 7766 2322 2222322 388887654
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.54 E-value=0.036 Score=54.01 Aligned_cols=42 Identities=12% Similarity=0.187 Sum_probs=34.0
Q ss_pred CCCChHHHHHHHHHcCCeEEEECCCcH----hHHHHHHHHcCCCCC
Q 001341 606 LQDGVPETIETLRKAGINFWMLTGDKQ----NTAIQIALSCNFISP 647 (1096)
Q Consensus 606 lr~~v~~~I~~l~~aGIkv~mlTGD~~----~ta~~ia~~~gl~~~ 647 (1096)
+.+++.+.++.+++.|++|+.+|||.. .|+.++.+.+|+-..
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~ 132 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPAT 132 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcc
Confidence 457899999999999999999999864 466666677887443
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=93.16 E-value=0.076 Score=52.27 Aligned_cols=27 Identities=26% Similarity=0.327 Sum_probs=24.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDK 631 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~ 631 (1096)
++-|++.++|+.|+++|+++.++|...
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~ 74 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQS 74 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECH
T ss_pred EecccHHHHHHHHHhhCCeEEEecccc
Confidence 467999999999999999999999643
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=92.85 E-value=0.028 Score=55.61 Aligned_cols=123 Identities=13% Similarity=0.133 Sum_probs=77.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 683 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1096)
..+.+++.++++.+++.|+++.++|+-....+.......++...-+. ++....
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~--~~~s~~------------------------- 144 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDH--LLSVDP------------------------- 144 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEESGG-------------------------
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccc--eeeeee-------------------------
Confidence 35678999999999999999999999999888888888777543211 111000
Q ss_pred cEEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCeeEE-e-
Q 001341 684 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG-I- 761 (1096)
Q Consensus 684 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIa-m- 761 (1096)
....+-.|.-=..+++.+.-..+.+++|||..+|+.+=++|++-.. +
T Consensus 145 -------------------------------~~~~KP~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~ 193 (220)
T d1zrna_ 145 -------------------------------VQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWIN 193 (220)
T ss_dssp -------------------------------GTCCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEEC
T ss_pred -------------------------------eeccccHHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEc
Confidence 0000111111122333443345689999999999999999997753 3
Q ss_pred -cCCchHHHHhhccccccccchhh
Q 001341 762 -SGREGLQAARAADYSIGKFRFLK 784 (1096)
Q Consensus 762 -~g~~~~~a~~~aD~vl~~f~~l~ 784 (1096)
.+....+....+|+++.+++-|.
T Consensus 194 r~~~~~~~~~~~~d~~i~~l~el~ 217 (220)
T d1zrna_ 194 RTGNVFEEMGQTPDWEVTSLRAVV 217 (220)
T ss_dssp TTCCCCCSSSCCCSEEESSHHHHH
T ss_pred CCCCCcccccCCCCEEECCHHHHH
Confidence 12222223345799887765443
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=89.58 E-value=0.28 Score=48.02 Aligned_cols=123 Identities=14% Similarity=0.167 Sum_probs=75.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 684 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1096)
.+.+++.+.++.|+ .+..++|+-....+..+-..+|+...-... +...+ +
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-~~~~~-----~--------------------- 134 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPH-IYSAK-----D--------------------- 134 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTC-EEEHH-----H---------------------
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhccccccccccee-ecccc-----c---------------------
Confidence 57788888887765 456789999999999999999985432210 00000 0
Q ss_pred EEEEEcChhHHHHHHHHHHHHhhhhhccceeEEEeeChhhH--HHHHHHHHhcCCeEEEEcCCccChhhhhhcCee-EEe
Q 001341 685 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK--AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGI 761 (1096)
Q Consensus 685 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~tP~qK--~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG-Iam 761 (1096)
.-..+..|... ..+.+.+.-..+.+++|||+.+|+.+=+.|++- |++
T Consensus 135 ------------------------------~~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v 184 (222)
T d2fdra1 135 ------------------------------LGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGF 184 (222)
T ss_dssp ------------------------------HCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred ------------------------------ccccccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 00001122211 123333333457899999999999999999974 455
Q ss_pred cCCc------hHHHHh-hccccccccchhhhHH
Q 001341 762 SGRE------GLQAAR-AADYSIGKFRFLKRLI 787 (1096)
Q Consensus 762 ~g~~------~~~a~~-~aD~vl~~f~~l~~ll 787 (1096)
.+.. ..+... .||+++.+++-|..++
T Consensus 185 ~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 185 TGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp CCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred ccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 3321 122233 4899999988877654
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=88.49 E-value=0.19 Score=47.06 Aligned_cols=26 Identities=31% Similarity=0.482 Sum_probs=23.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCC
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGD 630 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD 630 (1096)
++-|++.++|+.|+++|+++.++|..
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 45799999999999999999999975
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.63 E-value=0.092 Score=51.61 Aligned_cols=36 Identities=14% Similarity=0.239 Sum_probs=27.7
Q ss_pred HHHHHHHHhcCCeEEEEcCCccChhhhhhcCe-eEEe
Q 001341 726 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGI 761 (1096)
Q Consensus 726 ~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv-GIam 761 (1096)
..+++.++-..+.++||||..+|+.+-+.|++ +|.+
T Consensus 164 ~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V 200 (222)
T d1cr6a1 164 NFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILV 200 (222)
T ss_dssp HHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEEC
T ss_pred HHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEE
Confidence 34455555456789999999999999999997 5555
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=84.60 E-value=0.94 Score=44.55 Aligned_cols=41 Identities=5% Similarity=0.049 Sum_probs=33.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCC
Q 001341 604 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 646 (1096)
Q Consensus 604 D~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~ 646 (1096)
.++-+++.+++++|+ |+++.++|+.+...+...-...|+..
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~ 132 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTD 132 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccc
Confidence 467789999999885 78899999999888888888888743
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=84.45 E-value=1.4 Score=42.66 Aligned_cols=153 Identities=15% Similarity=0.153 Sum_probs=80.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEECCCcHhHHHHHHHHcCCCCCCCCCeEEEEcCCcH------HHHHHHHHHHHHHcccc
Q 001341 605 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE------DEVCRSLERVLLTMRIT 678 (1096)
Q Consensus 605 ~lr~~v~~~I~~l~~aGIkv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 678 (1096)
.+-||+.++++.+++. ....++|---.+-+.++|..+|+- +++.+ ...+. .+....+-+.......
T Consensus 81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp-----~e~~~-T~~~lD~~~~p~ee~e~ll~i~~~~~d- 152 (308)
T d1y8aa1 81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR-----GELHG-TEVDFDSIAVPEGLREELLSIIDVIAS- 152 (308)
T ss_dssp CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC-----SEEEE-EBCCGGGCCCCHHHHHHHHHHHHHHHH-
T ss_pred eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC-----ceeec-ccccccccCCChHHHHHHHHHhhhccC-
Confidence 3569999999999876 455666666667788999999983 11222 11111 1111111111111000
Q ss_pred CCCCCcEEEEEcChhHHHHHHHHHHHHhh--hhhccceeEEEeeChhhHHHHHHHHHh-cC-CeEEEEcCCccChhhhhh
Q 001341 679 TSEPKDVAFVVDGWALEIALKHYRKAFTE--LAILSRTAICCRVTPSQKAQLVELLKS-CD-YRTLAIGDGGNDVRMIQK 754 (1096)
Q Consensus 679 ~~~~~~~~lvi~g~~l~~~~~~~~~~f~~--l~~~~~~~i~~r~tP~qK~~iV~~lk~-~~-~~v~~iGDG~ND~~ml~~ 754 (1096)
.+++.|..+ +.+.|.. +..++..+- -+--..|+.+++..-+ .+ ...+.+||+..|+.||+.
T Consensus 153 ----------~~~eel~e~---~d~~f~~~e~~~i~e~Vk--~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~ 217 (308)
T d1y8aa1 153 ----------LSGEELFRK---LDELFSRSEVRKIVESVK--AVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEA 217 (308)
T ss_dssp ----------CCHHHHHHH---HHHHHHSHHHHHHHHTCB--CCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHH
T ss_pred ----------ccHHHHHHH---HHHHhccchHhhHHhhhc--ccCCchhHHHHHhhcccccCCcceeccCccccHHHHHH
Confidence 011222222 2222221 111111100 0122457777765543 22 335899999999999998
Q ss_pred c----CeeEEecCCchHHHHhhccccccccch
Q 001341 755 A----DIGVGISGREGLQAARAADYSIGKFRF 782 (1096)
Q Consensus 755 A----dvGIam~g~~~~~a~~~aD~vl~~f~~ 782 (1096)
| ++.|+..||+- +.+.||+++..-+.
T Consensus 218 ~r~~gGlaIsFNGN~Y--al~eA~VaiiS~~~ 247 (308)
T d1y8aa1 218 ARGLGGVAIAFNGNEY--ALKHADVVIISPTA 247 (308)
T ss_dssp HHHTTCEEEEESCCHH--HHTTCSEEEECSST
T ss_pred HhcCCCeeEEecCccc--cccccceEEeccch
Confidence 6 44445556554 88899999876444
|