Citrus Sinensis ID: 001378

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090

MSSDRRDGTRNPARSARREWVPRGSPARVVNPPPQSINPNTMNGVVENSRNMPTPDDNQHSRNIAPRVQNGQFTNHHRGRARGENQDKKLPKDLDLPQLLQEIQDKLMKSKVECMICYDMVKRSAPIWSCSSCFSIFHLSCIKKWARAPTSADLSAERSQGFNWRCPGCQSVQLTSSKEIRYVCFCGKRTDPTSDFYLTPHSCGEPCGKPLESKISSAGGSEEDLCPHKCVLQCHPGPCPPCKAFAPPRLCPCGKKMITTRCFDRKSVLTCGQHCNKHLECWRHKCEKICHVGPCGPCRVLVNASCFCKKKVEVVLCGDMAVKGEVKAEAGVFSCSSTCGKKLSCGHHSCGEICHPGPCGDCELLPSKIKSCFCGKMSLQEQRKSCLDPIPACSEKCGKPLACGLHYCDELCHAGNCPPCLAAVTQKCRCGSTSRNVECYRTTGGENFTCEKACGRKKNCGRHRCSERCCPLSSSNSLLSGDWDPHFCQMACGKKLRCGQHSCESLCHSGHCPPCLETIFTDLTCACGRTSFPPPLPCGTPPPSCQLPCSVPQPCGHSASHSCHFGDCPPCSVPIAKECIGGHVVLRNVPCGSKDIRCNKLCGKTRQCGMHACGRTCHPPPCDTACNSEPGSKASCGQVCGAPRRDCRHTCTALCHPSALCPDVRCEFPFTITCSCGRITASVPCDAGGSSSGYSSDTVYEASIVQKLPAPLQPVESTGKKIPLGQRKLMCDDECAKLERKRVLADAFEITTPNLDALHFGESAVTELLADLYRRDPKWVLSVEERCKFLVLGKNRGSTNALKVHVFCPMLKDKRDAVRLIAERWKLAVNPAGWEPKRFIVVHVTPKSKPPPRVIGVKGATTVNAPHAPVFDPLVDMDPRLVVSFLDLPRESDISALVLRFGGECELVWLNDKNALAVFSDPARAATATRRLDHGSVYYGAVVVQNVGAPSTANAWGGPGTVKEVGAALSSQRGNPWKKAVVQEMAWREDSWGEEESSAGSGDVQASAWKNKEAPIVASINRWSVLDSETSSYSSPVSIRTEKPAKQSASQSNKGGESNASSANVAGQPASSFSETELSEVVDDWEKAYD

cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEECcccccccEEcccccccEEcccHHHHHHHccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHccccccccccccEEEcccccHHHHHHHHHHHHHHccCEECcccccccEEEEEEcccccccccccccccccccccccccccccccccccccEEEcccccccHHHHHHHHHcccEEEEEEEccccEEEEEccHHHHHHHHHHccccccEEcEEEEEccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHc

****************************************************************************************************QEIQDKLMKSKVECMICYDMVKRSAPIWSCSSCFSIFHLSCIKKWAR***************NWRCPGCQSVQLTSSKEIRYVCFCGKRTDPTSDFYLTPHSCGEPCGKPLESKISSAGGSEEDLCPHKCVLQCHPGPCPPCKAFAPPRLCPCGKKMITTRCFDRKSVLTCGQHCNKHLECWRHKCEKICHVGPCGPCRVLVNASCFCKKKVEVVLCGDMAVKGEVKAEAGVFSCSSTCGKKLSCGHHSCGEICHPGPCGDCELLPSKIKSCFCGKMSLQEQRKSCLDPIPACSEKCGKPLACGLHYCDELCHAGNCPPCLAAVTQKCRCGSTSRNVECYRTTGGENFTCEKACGRKKNCGRHRCSERCCPLSSSNSLLSGDWDPHFCQMACGKKLRCGQHSCESLCHSGHCPPCLETIFTDLTCACGRTSFPPPLPCGTPPPSCQLPCSVPQPCGHSASHSCHFGDCPPCSVPIAKECIGGHVVLRNVPCGSKDIRCNKLCGKTRQCGMHACGRTCHPPPCDTAC*SE***KASCGQVCGAPRRDCRHTCTALCHPSALCPDVRCEFPFTITCSCGRITASVPCDAGGSSSGYSSDTVYEASIVQKL***LQPVESTGKKIPLGQRKLMCDDECAKLERKRVLADAFEITTPNLDALHFGESAVTELLADLYRRDPKWVLSVEERCKFLVLGKNRGSTNALKVHVFCPMLKDKRDAVRLIAERWKLAVNPAGWEPKRFIVVHVTPKSKP**RVIGVKGATTVNAPHAPVFDPLVDMDPRLVVSFLDLPRESDISALVLRFGGECELVWLNDKNALAVFSDPARAATATRRLDHGSVYYGAVVVQNVG****************************WKK***********************************PIVASINRWSV**********************************************************DWE****

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
NF-X1-type zinc finger protein NFXL1	Mediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi).	probable	Q9SY59

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1WHR, chain A
Confidence level:confident
Coverage over the Query: 765-858
View the alignment between query and template
View the model in PyMOL

Template: 3NW0, chain A
Confidence level:confident
Coverage over the Query: 95-149,162-174
View the alignment between query and template
View the model in PyMOL

Template: 1WHV, chain A
Confidence level:probable
Coverage over the Query: 881-939
View the alignment between query and template
View the model in PyMOL

Template: 3T5O, chain A
Confidence level:probable
Coverage over the Query: 251-403,414-692
View the alignment between query and template
View the model in PyMOL