Citrus Sinensis ID: 001436

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------108
Protein Sequence
MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGLEDIADGDLDLIDIDSLLDDDTFMSVAFE
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccEEEEEcHHHHHHccccccEEEccccccHHHHHHHcccccEEEEEEEEcccccccccEEEEEEEcccccccEEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccEEEEEEccccccccccccccEEEEEccccccHHHHHcccEEEEccccccccccEEEEEcccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHcccccccccccHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccccHHHHHHHcccHHHHHHHHHccccHHHHcccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccEEEEEcccEEEEEEccccccEEcccccccHHHHHHcccccEEEEEEEEEccccccccEEEEHHHcccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccEEEEEEccccccccccccccEEEEEcccEccHEEEcccEEEEEccccccccEEEEEEEcccEEEEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHccccccccccccHHHHEHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHcccccccccccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcHHccccHHcccccccHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
madrgsyalaprldMQQLQMEAQHRWLRPAEICEILCNYQkfhiaseppsrppsgslflfdRKVLRYFRkdghnwrkkkdgktvREAHEKLKVGSVDVLHCYYahgednenFQRRCYWMLEQDLMHIVFVHYLEvqgnksnvgdresnevtsnpgkhssltfsfpgnrtkapsgitdstsptstltlscedadsgydaedshqassRAHLYyelpqmgngprmekmdsglsysyflspssvrssipgdyvshaghipndnQDLMIECQKALGLASWEEVLEHcsgendnvpphaklesnvqkenifdgellsreaseensgsslpvqfnwqipladnssHFLKSIMDLSrdlepaydlgdglfeqrthdacllgapepfcafldqqnelpvqnnlqmqqrdveshsqtksnseseihgegtinFSFSVKQKLLngegnlekvDSFSRWMSKELeevdnlhvqssgiewsteecgnvvddsslspslsqdqlfsiidfspkwtytdpeiEVVVTGMFLKSHQEVAKCKWSCmfaevevpaevladgvlccripphavgrvpfyitcsnrlacsevrefdyivgsvkdadisdiygsstseSFLHLRLERILSMrsspqnhlseglcEKQKLISKIIQLKEEEESYQMveanpeknlSQHVEKYQILQKIMKEKLYSWLLRKVcedgkgpcilddegqGVLHLAASLgydwaikptvtagvsinfrdlsgwTALHWAAYCGREKTVAVLLSLgaapglltdpspefplsrtpsdlassnghkgisgFLAESSLTSLLLSLKmndsaddgalEDSIAKAVQTVSektatpandndesdvLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAakslrpvqgdglaHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVrghqarkkyrpiiwSVGILEKVILRWRrkgsglrgfrrdalgmnpnpqhmplkeddydfLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEgsretkesnmvpnglediadgdldlididslldddtfmsvafe
Flexible Loop (DISEMBL)
madrgsyalaprldmQQLQMEAQHRWLRPAEICEILCNYQKFHIaseppsrppsgslFLFDRKVLRYfrkdghnwrkkkdgktvreaheklkvgsvdVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQGNKSNVgdresnevtsnpgkhssltfsfpgnrtkapsgitdstsptsTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSqtksnseseihgegtiNFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQnhlseglcekqKLISKIIQLKEEEESYQMVeanpeknlsqHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVsektatpandndesdVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKiqahvrghqarkkyrpiiwsvgilekvilrwrrkgsglrgfrrdalgmnpnpqhmplkedDYDFLKDGRKQTEERLQKalgrvksmvqypearaQYRRLLTVvegsretkesnmvpnglediadGDLDLIDIDSLLDDDTFMSVAFE
Low Complexity Region (SEG)
MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDstsptstltlsCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGIEWSTEECGNVVddsslspslsqdqlfsIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCekqkliskiiqlkeeeesYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAEssltslllslKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGlediadgdldlididslldddTFMSVAFE
Disordered region (IsUnstruct)
********************EAQHRWLRPAEICEILCNYQKFHIA**********SLFLFDRKVLRYFRKDGHNWRKK****TVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQ************************************************************************************************SYF************DYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHC******************************************VQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQ************************************INFSFSVKQKLLNG***L*KVDSFSRWM******VDNLHVQSSGIEWSTEECGNV************DQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERIL******************KLISKII**********************HVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLL**********************************************************************************KDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGF***********************************************Y***RAQYRRLLTVV*****************DIADGDLDLIDIDSLLDDDTF******
Disordered Region (DISOPRED)
************LDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEP**RPPSGSLFLFDRKVLRYFRKDGHNWRKKK******EAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV***********************************************************************************************************************************************************************************************************************************************************************************************************************RW*********************************************IIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRL*************************************************SQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGS******************************DGRKQTEERLQKALGRVKSMVQY****AQYRRLLT*************************LDLIDIDSLLDDDTFMSVAF*
Disordered Region (DISEMBL)
MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQGNKS****************HSSLTFSFPGNRTKAPSGITDSTSPTSTLTLSCEDA************SSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNVQKENIFDGELLS***********LPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNL*********************HGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMR*********GLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQA********KKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGLEDIADGDLDLIDIDSLLDDDTFMSVAFE
Disordered Region (DISPRO)
*****SYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQG*************************************************************************************************************************************************************************************************************************************************************************************************************LEKVDSFSRWMSKELEEVDNLHV*******************SLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSV***DIS*IYGSSTSESFLHLRLERILSMRSSPQNH*********************EESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKM*******************************DESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGL********************EDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKE**************DLDLIDIDSLLDDDTFMSVAFE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGLEDIADGDLDLIDIDSLLDDDTFMSVAFE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	1078	2.2.26 [Sep-21-2011]
Q6NPP4	1050	Calmodulin-binding transc	yes	no	0.948	0.974	0.549	0.0
Q9FY74	1007	Calmodulin-binding transc	no	no	0.904	0.968	0.52	0.0
Q8GSA7	1032	Calmodulin-binding transc	no	no	0.911	0.952	0.446	0.0
Q9FYG2	1016	Calmodulin-binding transc	no	no	0.511	0.542	0.380	5e-93
O23463	923	Calmodulin-binding transc	no	no	0.520	0.607	0.352	7e-81
Q9LSP8	838	Calmodulin-binding transc	no	no	0.550	0.707	0.337	6e-79
Q9Y6Y1	1673	Calmodulin-binding transc	yes	no	0.102	0.065	0.452	7e-22
A2A891	1682	Calmodulin-binding transc	yes	no	0.102	0.065	0.452	9e-22
O94983	1202	Calmodulin-binding transc	no	no	0.100	0.089	0.442	2e-19
Q80Y50	1208	Calmodulin-binding transc	no	no	0.100	0.089	0.423	1e-17

>sp|Q6NPP4|CMTA2_ARATH Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana GN=CMTA2 PE=1 SV=1

 Score = 1092 bits (2823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1105 (54%), Positives = 755/1105 (68%), Gaps = 82/1105 (7%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLF 60
            MADRGS+  APRLD++QL  EAQHRWLRPAEICEIL N+QKFHIASEPP+RPPSGSLFLF
Sbjct: 1    MADRGSFGFAPRLDIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLF 60

Query: 61   DRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWML 120
            DRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGS+DVLHCYYAHGEDNENFQRRCYWML
Sbjct: 61   DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRCYWML 120

Query: 121  EQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTS 180
            EQDLMHIVFVHYLEV+GN+ +    + N   S  G  S                +  + +
Sbjct: 121  EQDLMHIVFVHYLEVKGNRMSTSGTKENHSNSLSGTGS--------------VNVDSTAT 166

Query: 181  PTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSS 240
             +S L+  CEDADSG    DS QASS      E PQ      M   ++    SY  + +S
Sbjct: 167  RSSILSPLCEDADSG----DSRQASSSLQQNPE-PQTVVPQIMHHQNASTINSY--NTTS 219

Query: 241  VRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKL---- 296
            V  +  G   +H   +   N       Q++  + +W+   E+      N+P +A L    
Sbjct: 220  VLGNRDGWTSAHGNRVKGSN------SQRSGDVPAWDASFENSLARYQNLPYNAPLTQTQ 273

Query: 297  ---------ESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMD 347
                     E   +K ++   E L          + L  Q NWQ P+ + S    K  MD
Sbjct: 274  PSTFGLIPMEGKTEKGSLLTSEHLR---------NPLQSQVNWQTPVQE-SVPLQKWPMD 323

Query: 348  LSRDLEPAYDLGDGLFEQRTHD-----ACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDV 402
                +  A DL   LF Q  H+     + LLG+            + P  NN        
Sbjct: 324  SHSGMTDATDL--ALFGQGAHENFGTFSSLLGS----QDQQSSSFQAPFTNN-------- 369

Query: 403  ESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQ 462
            E+    K   E  I+ E + N +  +++ LL  E +L+KVDSFSRW+SKEL E+++L +Q
Sbjct: 370  EAAYIPKLGPEDLIY-EASANQTLPLRKALLKKEDSLKKVDSFSRWVSKELGEMEDLQMQ 428

Query: 463  SS--GIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSH 520
            SS  GI W++ EC N    SSLSPSLS+DQ F++IDF PKWT TD E+EV+V G FL S 
Sbjct: 429  SSSGGIAWTSVECENAAAGSSLSPSLSEDQRFTMIDFWPKWTQTDSEVEVMVIGTFLLSP 488

Query: 521  QEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYI 580
            QEV    WSCMF EVEVPA++L DGVLCC  PPH VGRVPFYITCS+R +CSEVREFD++
Sbjct: 489  QEVTSYSWSCMFGEVEVPADILVDGVLCCHAPPHEVGRVPFYITCSDRFSCSEVREFDFL 548

Query: 581  VGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQ-NHLSEGLCEKQKLISKIIQLKE 639
             GS +  + +DIYG++T E+ LHLR E +L++R S Q +H+ E + EK++ ISKI+ LK+
Sbjct: 549  PGSTRKLNATDIYGANTIETSLHLRFENLLALRCSVQEHHIFENVGEKRRKISKIMLLKD 608

Query: 640  EEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVL 699
            E+E    +    EK+L++   K +++++  ++KLY WL+ KV E+GKGP ILD++GQGVL
Sbjct: 609  EKEP--PLPGTIEKDLTELEAKERLIREEFEDKLYLWLIHKVTEEGKGPNILDEDGQGVL 666

Query: 700  HLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTD 759
            HLAA+LGYDWAIKP + AGVSINFRD +GW+ALHWAA+ GRE TVAVL+SLGA  G L D
Sbjct: 667  HLAAALGYDWAIKPILAAGVSINFRDANGWSALHWAAFSGREDTVAVLVSLGADAGALAD 726

Query: 760  PSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQT 819
            PSPE PL +T +DLA  NGH+GISGFLAESSLTS L  L + D+ ++ + + S AKAV T
Sbjct: 727  PSPEHPLGKTAADLAYGNGHRGISGFLAESSLTSYLEKLTV-DAKENSSADSSGAKAVLT 785

Query: 820  VSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF--NNEL 877
            V+E+TATP +  D  + LS+KDSLTA+ NATQAADR+HQ+FRMQSFQRKQL+E   +N+ 
Sbjct: 786  VAERTATPMSYGDVPETLSMKDSLTAVLNATQAADRLHQVFRMQSFQRKQLSELGGDNKF 845

Query: 878  GISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVR 937
             IS E A+S  AAK+ +     G  H+AA+QIQKK+RGWKKRKEFLLIRQRIVKIQAHVR
Sbjct: 846  DISDELAVSFAAAKTKKSGHSSGAVHAAAVQIQKKYRGWKKRKEFLLIRQRIVKIQAHVR 905

Query: 938  GHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLK 997
            GHQ RK+YR IIWSVG+LEK+ILRWRRKGSGLRGF+RD +     P     +EDDYDFLK
Sbjct: 906  GHQVRKQYRAIIWSVGLLEKIILRWRRKGSGLRGFKRDTISKPTEPVCPAPQEDDYDFLK 965

Query: 998  DGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETK--ESNMVPNGLEDIAD 1055
            +GRKQTEERLQKAL RVKSM QYPEARAQYRRLLTVVEG RE +   S+ + N  E+ A+
Sbjct: 966  EGRKQTEERLQKALTRVKSMAQYPEARAQYRRLLTVVEGFRENEASSSSALKNNTEEAAN 1025

Query: 1056 GDLD--LIDIDSLLDDDTFMSVAFE 1078
             + +  LIDIDSLLDDDTFMS+AFE
Sbjct: 1026 YNEEDDLIDIDSLLDDDTFMSLAFE 1050

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FY74|CMTA1_ARATH Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana GN=CMTA1 PE=2 SV=2

 Score = 1020 bits (2638), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 572/1100 (52%), Positives = 722/1100 (65%), Gaps = 125/1100 (11%)

Query: 1    MADRGSY-ALAP--RLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSL 57
            M DR S+ ++ P  +LDM+QL  EAQHRWLRP EICEIL NY KFHIASE P+RP SGSL
Sbjct: 1    MVDRRSFGSITPPLQLDMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSL 60

Query: 58   FLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCY 117
            FLFDRKVLRYFRKDGHNWRKKKDGKT+REAHEKLKVGS+DVLHCYYAHGE NENFQRRCY
Sbjct: 61   FLFDRKVLRYFRKDGHNWRKKKDGKTIREAHEKLKVGSIDVLHCYYAHGEANENFQRRCY 120

Query: 118  WMLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITD 177
            WMLEQ LMHIVFVHYLEV+GN++++G +E+N  + N                 A   I  
Sbjct: 121  WMLEQHLMHIVFVHYLEVKGNRTSIGMKENNSNSVN---------------GTASVNIDS 165

Query: 178  STSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLS 237
            + SPTSTL+  CEDAD+G    DS QASS      E PQ GN            Y +  +
Sbjct: 166  TASPTSTLSSLCEDADTG----DSQQASSVLRPSPE-PQTGN-----------RYGWTPA 209

Query: 238  PSSVR-SSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKL 296
            P     S + G+ V  +            + Q+ + + + + V    +  +D  P    L
Sbjct: 210  PGMRNVSQVHGNRVRES------------DSQRLVDVRALDTVGNSLTRFHDQ-PYCNNL 256

Query: 297  ESNVQKENIFDGELLSREASE-------ENSGSSLPVQFNWQIPLADNSSHFLKSIMDLS 349
             + +Q  N     +L  E SE       E+  + L  QFNWQ    D++        DL+
Sbjct: 257  LTQMQPSNT--DSMLVEENSEKGGRLKAEHIRNPLQTQFNWQ----DDT--------DLA 302

Query: 350  RDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTK 409
                        LFEQ   D       E F + L  +N  P             S+    
Sbjct: 303  ------------LFEQSAQDNF-----ETFSSLLGSENLQPFGI----------SYQAPP 335

Query: 410  SNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS--GIE 467
            SN +SE            V + L   E +L+KVDSFS+W  KEL E+++L +QSS   I 
Sbjct: 336  SNMDSEY---------MPVMKILRRSEDSLKKVDSFSKWAIKELGEMEDLQMQSSRGDIA 386

Query: 468  WSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCK 527
            W+T EC       SLSPSLS+DQ F+I+DF PK   TD E+EV+V G FL S QEV K  
Sbjct: 387  WTTVECETAAAGISLSPSLSEDQRFTIVDFWPKSAKTDAEVEVMVIGTFLLSPQEVTKYN 446

Query: 528  WSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDA 587
            WSCMF EVEVPAE+L DGVLCC  PPH  G VPFY+TCSNR ACSEVREFD++ GS +  
Sbjct: 447  WSCMFGEVEVPAEILVDGVLCCHAPPHTAGHVPFYVTCSNRFACSEVREFDFLSGSTQKI 506

Query: 588  DISDIYGSSTSESFLHLRLERILSMRS-SPQNHLSEGLCEKQKLISKIIQLKEEEESYQM 646
            + +D+YG+ T+E+ L LR E++L+ R    ++H+ E + +K++ ISKI+ LKEE+E   +
Sbjct: 507  NATDVYGTYTNEASLQLRFEKMLAHRDFVHEHHIFEDVGDKRRQISKIMLLKEEKE--YL 564

Query: 647  VEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLG 706
            +    +++ ++   K Q+ +++ +E+LY WL+ KV E+GKGP ILD++GQG+LH  A+LG
Sbjct: 565  LPGTYQRDSTKQEPKGQLFRELFEEELYIWLIHKVTEEGKGPNILDEDGQGILHFVAALG 624

Query: 707  YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPL 766
            YDWAIKP + AGV+INFRD +GW+ALHWAA+ GRE+TVAVL+SLGA  G LTDPSPE PL
Sbjct: 625  YDWAIKPVLAAGVNINFRDANGWSALHWAAFSGREETVAVLVSLGADAGALTDPSPELPL 684

Query: 767  SRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTAT 826
             +T +DLA +NGH+GISGFLAESSLTS L  L + DS ++        KAVQTVSE+TA 
Sbjct: 685  GKTAADLAYANGHRGISGFLAESSLTSYLEKLTV-DSKENSPANSCGEKAVQTVSERTAA 743

Query: 827  PANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNE--LGISYEHA 884
            P    D  + LSLKDSLTA+ NATQAADR+HQ+FRMQSFQRKQL +  ++  + IS + A
Sbjct: 744  PMTYGDVPEKLSLKDSLTAVRNATQAADRLHQVFRMQSFQRKQLCDIGDDEKIDISDQLA 803

Query: 885  LSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKK 944
            +S  A+K+  P QGD     AA  IQKK+RGWKKRKEFLLIRQRIVKIQAHVRGHQ RK+
Sbjct: 804  VSFAASKTKNPGQGDVSLSCAATHIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQ 863

Query: 945  YRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQ--------HMPLKEDDYDFL 996
            YR +IWSVG+LEK+ILRWRRKG+GLRGF+R+A+     P+         +P +ED+YD+L
Sbjct: 864  YRTVIWSVGLLEKIILRWRRKGNGLRGFKRNAVAKTVEPEPPVSAICPRIP-QEDEYDYL 922

Query: 997  KDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESN--MVPNGLEDIA 1054
            K+GRKQTEERLQKAL RVKSMVQYPEAR QYRRLLTVVEG RE + S+   + N  E+  
Sbjct: 923  KEGRKQTEERLQKALTRVKSMVQYPEARDQYRRLLTVVEGFRENEASSSASINNKEEEAV 982

Query: 1055 DGDL-DLIDIDSLLDDDTFM 1073
            + +  D IDI+SLL+DDT M
Sbjct: 983  NCEEDDFIDIESLLNDDTLM 1002

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'. Activates the expression of the V-PPase proton pump in pollen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GSA7|CMTA3_ARATH Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE=1 SV=1

 Score =  811 bits (2095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/1112 (44%), Positives = 657/1112 (59%), Gaps = 129/1112 (11%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLF 60
            MA+   ++    LD+ Q+  EA+HRWLRP EICEIL NYQ+F I++EPP+ P SGS+F+F
Sbjct: 1    MAEARRFSPVHELDVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMF 60

Query: 61   DRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWML 120
            DRKVLRYFRKDGHNWRKKKDGKTV+EAHE+LK GSVDVLHCYYAHG+DNENFQRR YW+L
Sbjct: 61   DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGQDNENFQRRSYWLL 120

Query: 121  EQDLMHIVFVHYLEVQGNKS----NVGDRESNEVTSNPGKHSSLT--------FSFPGNR 168
            +++L HIVFVHYLEV+G++     N   R  +   S      +LT         SF  N 
Sbjct: 121  QEELSHIVFVHYLEVKGSRVSTSFNRMQRTEDAARSPQETGDALTSEHDGYASCSFNQND 180

Query: 169  TKAPSGITDSTSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDS 228
                S  TDS S     +   EDA+S Y+       SS A+ + EL Q   G  +   D 
Sbjct: 181  HSNHSQTTDSASVNGFHSPELEDAESAYN----QHGSSTAYSHQELQQPATGGNLTGFDP 236

Query: 229  GLSYSYFLSPSSVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGEND 288
               Y   L+P   R S    Y      IP  +  +M++  K +          +  G  +
Sbjct: 237  --YYQISLTP---RDS----YQKELRTIPVTDSSIMVDKSKTI----------NSPGVTN 277

Query: 289  NVPPHAKLESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSH-FLKSIMD 347
             +     ++S   +E +             N GS +       +PL  NS H  L  I++
Sbjct: 278  GLKNRKSIDSQTWEEIL------------GNCGSGVEA-----LPLQPNSEHEVLDQILE 320

Query: 348  LSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQ 407
             S  ++    L + + + +  +       +    F  Q  EL   +NL   ++       
Sbjct: 321  SSFTMQDFASLQESMVKSQNQELNSGLTSDRTVWFQGQDMELNAISNLASNEK------- 373

Query: 408  TKSNSESEIHGEGTINFSFSVKQKLLNG---EGNLEKVDSFSRWMSKELEEV-------D 457
                            +  ++KQ LL+G   E  L+K+DSF+RWMSKEL +V       +
Sbjct: 374  --------------APYLSTMKQHLLHGALGEEGLKKMDSFNRWMSKELGDVGVIADANE 419

Query: 458  NLHVQSSGIEWS---TEECGNV------VDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEI 508
            +    SS   W    +E+  N       +D   +SPSLS++QLFSI DFSP W Y   E+
Sbjct: 420  SFTQSSSRTYWEEVESEDGSNGHNSRRDMDGYVMSPSLSKEQLFSINDFSPSWAYVGCEV 479

Query: 509  EVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNR 568
             V VTG FLK+ +E    +WSCMF + EVPA+V+++G+L C  P H  GRVPFY+TCSNR
Sbjct: 480  VVFVTGKFLKTREETEIGEWSCMFGQTEVPADVISNGILQCVAPMHEAGRVPFYVTCSNR 539

Query: 569  LACSEVREFDYIVG--SVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCE 626
            LACSEVREF+Y V    V D +  D     ++   L  R  ++L  +S   + +S    +
Sbjct: 540  LACSEVREFEYKVAESQVFDREADD----ESTIDILEARFVKLLCSKSENTSPVSGNDSD 595

Query: 627  KQKLISKI-IQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDG 685
              +L  KI + L E ++    +  N    +SQ   K  +LQ+ +KE L+SWLL+K+ E G
Sbjct: 596  LSQLSEKISLLLFENDDQLDQMLMN---EISQENMKNNLLQEFLKESLHSWLLQKIAEGG 652

Query: 686  KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVA 745
            KGP +LD+ GQGVLH AASLGY+WA++PT+ AGVS++FRD++GWTALHWAA+ GRE+ + 
Sbjct: 653  KGPSVLDEGGQGVLHFAASLGYNWALEPTIIAGVSVDFRDVNGWTALHWAAFFGRERIIG 712

Query: 746  VLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSAD 805
             L++LGAAPG LTDP+P+FP   TPSDLA +NGHKGI+G+L+E +L + +  L +ND   
Sbjct: 713  SLIALGAAPGTLTDPNPDFPSGSTPSDLAYANGHKGIAGYLSEYALRAHVSLLSLND--- 769

Query: 806  DGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSF 865
                             K A            SL DSLTA+ NATQAA RIHQ+FR QSF
Sbjct: 770  -----------------KNAETVEMAPSPSSSSLTDSLTAVRNATQAAARIHQVFRAQSF 812

Query: 866  QRKQLTEFNN-ELGISYEHALSLVAAKSLRP--VQGDGLAHSAAIQIQKKFRGWKKRKEF 922
            Q+KQL EF + +LG+S E ALS++A K+ +      D    +AAI+IQ KFRG+K RK++
Sbjct: 813  QKKQLKEFGDKKLGMSEERALSMLAPKTHKSGRAHSDDSVQAAAIRIQNKFRGYKGRKDY 872

Query: 923  LLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPN 982
            L+ RQRI+KIQAHVRG+Q RK YR IIWSVG+LEKVILRWRRKG+GLRGF+ +AL     
Sbjct: 873  LITRQRIIKIQAHVRGYQFRKNYRKIIWSVGVLEKVILRWRRKGAGLRGFKSEAL--VEK 930

Query: 983  PQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKE 1042
             Q    KE+D DF K GRKQTE+RLQKAL RVKSMVQYPEAR QYRRLL VV   +E+K 
Sbjct: 931  MQDGTEKEEDDDFFKQGRKQTEDRLQKALARVKSMVQYPEARDQYRRLLNVVNDIQESKV 990

Query: 1043 SNMVPNGLEDIADGDLDLIDIDSLL-DDDTFM 1073
               + N      D D DLIDI++LL DDDT M
Sbjct: 991  EKALENSEATCFDDDDDLIDIEALLEDDDTLM 1022

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FYG2|CMTA4_ARATH Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE=1 SV=1

 Score =  343 bits (879), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 227/596 (38%), Positives = 344/596 (57%), Gaps = 45/596 (7%)

Query: 487  SQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGV 546
            + +Q F+I D SP W Y +   +V++ G FL    E     WSCMF   +VP E++ +GV
Sbjct: 441  AHNQKFTIQDISPDWGYANETTKVIIIGSFLCDPTEST---WSCMFGNAQVPFEIIKEGV 497

Query: 547  LCCRIPPHAVGRVPFYITCSNRLACSEVREFDY------IVGSVKDADISDIYGSSTSES 600
            + C  P    G+V   IT  + L CSE+REF+Y            +   SD+  +S +E 
Sbjct: 498  IRCEAPQCGPGKVNLCITSGDGLLCSEIREFEYREKPDTCCPKCSEPQTSDM-STSPNEL 556

Query: 601  FLHLR-LERILSMRSSP-QNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANP-EKNLSQ 657
             L +R ++ +LS RSS  +++L  G     KL++K   LK +++ ++ V     + + S 
Sbjct: 557  ILLVRFVQTLLSDRSSERKSNLESG---NDKLLTK---LKADDDQWRHVIGTIIDGSASS 610

Query: 658  HVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTA 717
                  +LQ+++K+KL +WL  + C++    C L  + QG++H+ A LG++WA  P +  
Sbjct: 611  TSTVDWLLQELLKDKLDTWLSSRSCDEDYITCSLSKQEQGIIHMVAGLGFEWAFYPILAH 670

Query: 718  GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSN 777
            GV+++FRD+ GW+ALHWAA  G EK VA L++ GA+ G +TDPS + P  +T + +A+SN
Sbjct: 671  GVNVDFRDIKGWSALHWAAQFGSEKMVAALIASGASAGAVTDPSRQDPNGKTAASIAASN 730

Query: 778  GHKGISGFLAESSLTSLLLSLKMNDSADD-GALEDSIAKAVQTVSEKTATPANDNDESDV 836
            GHKG++G+L+E +LT+ L SL + ++ +     +    K + ++SE+  +P+ + D+   
Sbjct: 731  GHKGLAGYLSEVALTNHLSSLTLEETENSKDTAQVQTEKTLNSISEQ--SPSGNEDQ--- 785

Query: 837  LSLKDSLTAICNATQAADRIHQIFRMQSFQRKQ-----LTEFNNELGISYEHALSLVAAK 891
            +SLKD+L A+ NA QAA RI   FR  SF++++     L     E G+  E    + A  
Sbjct: 786  VSLKDTLAAVRNAAQAAARIQAAFRAHSFRKRKQREAALVACLQEYGMYCEDIEGISAMS 845

Query: 892  SLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWS 951
             L   +G    +SAA+ IQK FRG+K RK FL +RQ++VKIQAHVRG+Q RK Y+ I W+
Sbjct: 846  KLTFGKGRNY-NSAALSIQKNFRGYKDRKCFLELRQKVVKIQAHVRGYQIRKNYKVICWA 904

Query: 952  VGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQ-TEERLQKA 1010
            V IL+KV+LRWRRKG GLRGFR+D      +        +D D LK  RKQ  +  + +A
Sbjct: 905  VRILDKVVLRWRRKGVGLRGFRQDVESTEDS--------EDEDILKVFRKQKVDVAVNEA 956

Query: 1011 LGRVKSMVQYPEARAQYRRLL-----TVVEGSRETKESNMVPNGLEDIADGDLDLI 1061
              RV SM   PEAR QY R+L     T  E  +         +GL DIAD + D +
Sbjct: 957  FSRVLSMSNSPEARQQYHRVLKRYCQTKAELGKTETLVGEDDDGLFDIADMEYDTL 1012

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|O23463|CMTA5_ARATH Calmodulin-binding transcription activator 5 OS=Arabidopsis thaliana GN=CMTA5 PE=2 SV=2

 Score =  303 bits (775), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 219/622 (35%), Positives = 323/622 (51%), Gaps = 61/622 (9%)

Query: 432  LLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGI--EWSTEECGNVVDDSSLSPSLSQ- 488
            L NG G+    DSF RW       V+N    S G   + S E       DSS  P++   
Sbjct: 315  LNNGYGSQ---DSFGRW-------VNNFISDSPGSVDDPSLEAVYTPGQDSSTPPTVFHS 364

Query: 489  -----DQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLA 543
                 +Q+F+I D SP W Y+  + +++VTG F  S Q + +    C+  E+ VPAE L 
Sbjct: 365  HSDIPEQVFNITDVSPAWAYSTEKTKILVTGFFHDSFQHLGRSNLICICGELRVPAEFLQ 424

Query: 544  DGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDY-IVGSVKDADISDIYGSSTSESFL 602
             GV  C +PP + G V  Y++       S++  F++  V  ++ A   D       E   
Sbjct: 425  MGVYRCFLPPQSPGVVNLYLSVDGNKPISQLFSFEHRSVQFIEKAIPQDDQLYKWEEFEF 484

Query: 603  HLRLERILSMRSSPQNHLS-----EGLCEKQKLISKIIQLKEEEESYQM--VEAN--PEK 653
             +RL  +L   S+  + L+     E L E +KL S+   L     +Y M  ++AN  P  
Sbjct: 485  QVRLAHLLFTSSNKISVLTSKISPENLLEAKKLASRTSHLLNSW-AYLMKSIQANEVPFD 543

Query: 654  NLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKP 713
                H     + +  +K +L  WLL KV E+ +     D +G GV+HL A LGY W+I  
Sbjct: 544  QARDH-----LFELTLKNRLKEWLLEKVIEN-RNTKEYDSKGLGVIHLCAVLGYTWSILL 597

Query: 714  TVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDL 773
               A +S++FRD  GWTALHWAAY GREK VA LLS GA P L+TDP+ EF    T +DL
Sbjct: 598  FSWANISLDFRDKQGWTALHWAAYYGREKMVAALLSAGARPNLVTDPTKEFLGGCTAADL 657

Query: 774  ASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTV-SEKTATPANDND 832
            A   G+ G++ FLAE  L +     +  D    G    +I+  ++T+ +EK++ P N N+
Sbjct: 658  AQQKGYDGLAAFLAEKCLVA-----QFKDMQTAG----NISGNLETIKAEKSSNPGNANE 708

Query: 833  ESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQ-RKQLTEFNNELGISYEHALSLVAAK 891
            E    SLKD+L A   A +AA RI   FR    + R     F ++     E A +++AA 
Sbjct: 709  EEQ--SLKDTLAAYRTAAEAAARIQGAFREHELKVRSSAVRFASK----EEEAKNIIAAM 762

Query: 892  SLRPVQGDGLAH---SAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPI 948
             ++    +       +AA +IQ +F+ WK R+EFL +R++ ++IQA  RG Q R++Y+ I
Sbjct: 763  KIQHAFRNFEVRRKIAAAARIQYRFQTWKMRREFLNMRKKAIRIQAAFRGFQVRRQYQKI 822

Query: 949  IWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQ 1008
             WSVG+LEK ILRWR K  G RG +         P      E   DF K  +KQ EERL+
Sbjct: 823  TWSVGVLEKAILRWRLKRKGFRGLQVS------QPDEKEGSEAVEDFYKTSQKQAEERLE 876

Query: 1009 KALGRVKSMVQYPEARAQYRRL 1030
            +++ +V++M +  +A+  YRR+
Sbjct: 877  RSVVKVQAMFRSKKAQQDYRRM 898

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'. Activates the expression of the V-PPase proton pump in pollen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSP8|CMTA6_ARATH Calmodulin-binding transcription activator 6 OS=Arabidopsis thaliana GN=CMTA6 PE=2 SV=1

 Score =  296 bits (758), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 215/637 (33%), Positives = 334/637 (52%), Gaps = 44/637 (6%)

Query: 407  QTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGI 466
            Q  +N  +E HG  T+    S+   L +G  + E   SF RWM+  + E  N  ++    
Sbjct: 206  QNAANGTAE-HGNATVA-DGSLDALLNDGPQSRE---SFGRWMNSFISE-SNGSLEDPSF 259

Query: 467  EWSTEECGNVVDDSSLSPSLSQ--DQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVA 524
            E       + +   ++  S S   +Q+F+I D SP W Y+  + +++VTG    S+Q + 
Sbjct: 260  EPMVMPRQDPLAPQAVFHSHSNIPEQVFNITDVSPAWAYSSEKTKILVTGFLHDSYQHLE 319

Query: 525  KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSV 584
            +    C+  +  VPAE L  GV  C IPPH+ G V  Y++       S+   F++    V
Sbjct: 320  RSNLYCVCGDFCVPAEYLQAGVYRCIIPPHSPGMVNLYLSADGHKPISQCFRFEHRAVPV 379

Query: 585  KDADISDIYGSSTSESF-LHLRLERILSMRSSPQNHLS-----EGLCEKQKLISKIIQLK 638
             D  + +    S  E F   +RL  +L   S+  N LS       L + +KL SK   L 
Sbjct: 380  LDKTVPEDNQDSKWEEFEFQVRLSHLLFTSSNKLNVLSSKISPHNLRDAKKLASKTNHLL 439

Query: 639  EEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGV 698
                +Y +V++     +S    K  + +  +K +L  WL+ KV E G+     D +G GV
Sbjct: 440  NSW-AY-LVKSIQGNKVSFDQAKDHLFELSLKNRLKEWLMEKVLE-GRNTLDYDSKGLGV 496

Query: 699  LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 758
            +HL ASLGY W+++    +G+S+NFRD  GWTALHWAAY GREK VA LLS GA P L+T
Sbjct: 497  IHLCASLGYTWSVQLFSLSGLSLNFRDKQGWTALHWAAYYGREKMVAALLSAGARPNLVT 556

Query: 759  DPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQ 818
            D + +       +DLA  NG+ G++ +LAE  L +    +K+  +   G LE   A+ + 
Sbjct: 557  DSTKDNLGGCMAADLAQQNGYDGLAAYLAEKCLVAQFRDMKIAGNI-TGDLEACKAEMLN 615

Query: 819  TVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQ--RKQLTEFNNE 876
                +   P ++       SLKD+L A   A +AA RI   FR ++ +  R  + +F N+
Sbjct: 616  ----QGTLPEDEQ------SLKDALAAYRTAAEAAARIQGAFREKALKAARSSVIQFANK 665

Query: 877  LGISYEHALSLVAAKSLRPV---QGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQ 933
                 E A S++AA  ++             AA +IQ +F+ WK R+E+L +R++ ++IQ
Sbjct: 666  ----EEEAKSIIAAMKIQNAFRKYDTRRKIEAAYRIQCRFQTWKIRREYLNMRRQAIRIQ 721

Query: 934  AHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDY 993
            A  RG QAR++Y+ I+WSVG+LEK +LRWR+K  G RG +  A   +P        E   
Sbjct: 722  AAFRGLQARRQYKKILWSVGVLEKAVLRWRQKRKGFRGLQVAAEEDSPG-------EAQE 774

Query: 994  DFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRL 1030
            DF K  ++Q EERL++++ RV++M +  +A+  YRR+
Sbjct: 775  DFYKTSQRQAEERLERSVVRVQAMFRSKKAQQDYRRM 811

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9Y6Y1|CMTA1_HUMAN Calmodulin-binding transcription activator 1 OS=Homo sapiens GN=CAMTA1 PE=1 SV=4

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 5/115 (4%)

Query: 23  QHRWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKD 80
           +HRW    EI   L  ++K    + + P +RP +GS+ L++RK ++Y RKDG+ W+K+KD
Sbjct: 71  RHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKY-RKDGYCWKKRKD 129

Query: 81  GKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
           GKT RE H KLKV  V+ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct: 130 GKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNP--DIVLVHYLNV 182

Transcriptional activator. May act as a tumor suppressor.

Homo sapiens (taxid: 9606)

>sp|A2A891|CMTA1_MOUSE Calmodulin-binding transcription activator 1 OS=Mus musculus GN=Camta1 PE=2 SV=1

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 5/115 (4%)

Query: 23  QHRWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKD 80
           +HRW    EI   L  ++K    + + P +RP +GS+ L++RK ++Y RKDG+ W+K+KD
Sbjct: 71  RHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKY-RKDGYCWKKRKD 129

Query: 81  GKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
           GKT RE H KLKV  V+ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct: 130 GKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNP--DIVLVHYLNV 182

Transcriptional activator.

Mus musculus (taxid: 10090)

>sp|O94983|CMTA2_HUMAN Calmodulin-binding transcription activator 2 OS=Homo sapiens GN=CAMTA2 PE=1 SV=3

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 5/113 (4%)

Query: 25  RWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
           RW    EI   L  ++K    ++  P +RP +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct: 40  RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 98

Query: 83  TVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
           T RE H KLKV  ++ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct: 99  TTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 149

Transcription activator. May act as tumor suppressor.

Homo sapiens (taxid: 9606)

>sp|Q80Y50|CMTA2_MOUSE Calmodulin-binding transcription activator 2 OS=Mus musculus GN=Camta2 PE=2 SV=1

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/118 (42%), Positives = 69/118 (58%), Gaps = 10/118 (8%)

Query: 25  RWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
           RW    EI   L  ++K    ++  P +RP +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct: 40  RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 98

Query: 83  TVREAHEKLKVGSVD-----VLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
           T RE H KLKV  ++      L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct: 99  TTREDHMKLKVQGMEPVSWQCLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 154

Transcription activator. May act as tumor suppressor.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	1078
356528046	1079	PREDICTED: calmodulin-binding transcript	0.985	0.984	0.592	0.0
356557555	1088	PREDICTED: calmodulin-binding transcript	0.992	0.983	0.593	0.0
356510676	1046	PREDICTED: calmodulin-binding transcript	0.957	0.986	0.582	0.0
449438552	1067	PREDICTED: calmodulin-binding transcript	0.957	0.967	0.577	0.0
357445841	1052	Calmodulin-binding transcription activat	0.949	0.973	0.565	0.0
297794005	1062	calmodulin-binding protein [Arabidopsis	0.961	0.976	0.554	0.0
30697970	1050	calmodulin-binding transcription activat	0.948	0.974	0.549	0.0
9759398	1014	ER66 protein-like [Arabidopsis thaliana]	0.896	0.952	0.535	0.0
186521534	1007	calmodulin-binding transcription activat	0.904	0.968	0.52	0.0
9955528	1007	putative protein [Arabidopsis thaliana]	0.904	0.968	0.519	0.0

>gi|356528046|ref|XP_003532616.1| PREDICTED: calmodulin-binding transcription activator 2-like [Glycine max]

 Score = 1219 bits (3155), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 649/1095 (59%), Positives = 785/1095 (71%), Gaps = 33/1095 (3%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLF 60
            M++R S+ L PRLD+QQLQ+EAQHRWLRPAEICEIL NY+ F I SEPP+RPPSGSLFLF
Sbjct: 1    MSERSSFGLGPRLDLQQLQLEAQHRWLRPAEICEILRNYRMFQITSEPPNRPPSGSLFLF 60

Query: 61   DRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWML 120
            DRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGSVDVLHCYYAHGE+NENFQRR YWML
Sbjct: 61   DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWML 120

Query: 121  EQDLMHIVFVHYLEVQGNKSNVGDRE-SNEVTSNPGKHSSLTFSFPGNRTKAPSGITDST 179
            E D+MHIVFVHYL+V+ NK+N+G +  S+EVTS+  K SSL+  FP N    PSG TDS 
Sbjct: 121  ELDMMHIVFVHYLDVKVNKTNIGGKTYSDEVTSDSQKSSSLSSGFPRNYGSMPSGSTDSM 180

Query: 180  SPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSP- 238
            SPTSTLT  CEDADS    ED HQASS  H Y E   +GN   M+K+ +  + SY + P 
Sbjct: 181  SPTSTLTSLCEDADS----EDIHQASSGLHSYRESQNLGNDRPMDKIHARSNSSYLMHPF 236

Query: 239  SSVRSSIP---GDYVSHA-GHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVP--- 291
            S     +P    +Y+ H  G+    +    IE Q+A G+ASW+  +E  +G++ +     
Sbjct: 237  SDNHGQLPVSGAEYIPHVQGNKSRASDTTYIEGQRAHGIASWDNAMEQSAGKHADPSLVS 296

Query: 292  ----PHAKLESNVQKENIFDGELLSRE-ASEENSGSSLPVQFNWQIPLADNSSHFLKSIM 346
                P + + + + K +   G LL  + A  E    + PVQ NWQIP  DN+        
Sbjct: 297  STSIPSSAMGNILDKNHTVPGNLLGHKIALTEVERGAQPVQSNWQIPFEDNTGELPNWGF 356

Query: 347  DLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHS 406
              S  LE   D G  L    T++A     PE F               L+ Q    +S  
Sbjct: 357  TQSLGLEFGSDYGTSLLGDVTNNAGPEIDPELFT----------FNGELKEQYTHGQSQP 406

Query: 407  QTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS-G 465
              KSNS  E+ GE +IN++ ++++ LL+GE +L+KVDSFSRWM+KEL  VD+LH+QSS G
Sbjct: 407  ALKSNSAYEVPGEASINYALTMRRGLLDGEESLKKVDSFSRWMTKELAGVDDLHMQSSPG 466

Query: 466  IEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAK 525
            I WST+ECG+V+DD+SL  SLSQDQLFSI DFSPKW Y + EIEV++ G FLKS   VAK
Sbjct: 467  ISWSTDECGDVIDDTSLHLSLSQDQLFSINDFSPKWAYAESEIEVLIVGTFLKSQPVVAK 526

Query: 526  CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVK 585
            C WSCMF EVEVPAEVLADG+LCC+ PPH +GRVPFY+TCSNR ACSEVREF+Y  G  +
Sbjct: 527  CNWSCMFGEVEVPAEVLADGILCCQAPPHKIGRVPFYVTCSNRFACSEVREFEYREGFDR 586

Query: 586  DADISDIYGSSTSESFLHLRLERILSMRS-SPQNHLSEGLCEKQKLISKIIQLKEEEESY 644
            + +  D + +S SE  LHLRL  +LS+ S    N + EG  +K+ LI K+I LKEEEE  
Sbjct: 587  NINFPDFFNNS-SEMELHLRLVGLLSLNSMHTLNQVFEGDMDKRNLIFKLISLKEEEEYS 645

Query: 645  QMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS 704
               E   E ++SQ   K  +  K +KEKLYSWLL KV E GKGP +LD+EGQGVLHL A+
Sbjct: 646  SKEETTAEMDISQQKLKEHMFHKQVKEKLYSWLLHKVTETGKGPLVLDEEGQGVLHLIAA 705

Query: 705  LGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEF 764
            LGYDWAI P +TAGV+INFRD++GWTALHWAA+CGRE+TVAVL+S+ AA G LTDP PEF
Sbjct: 706  LGYDWAINPIITAGVNINFRDVNGWTALHWAAFCGRERTVAVLVSMDAAAGALTDPCPEF 765

Query: 765  PLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKT 824
            PL RTP+DLASS GHKGISGFLAES LTS L SL M D   DG  E S  K VQTVSE+T
Sbjct: 766  PLGRTPADLASSKGHKGISGFLAESLLTSHLESLTM-DENKDGRKETSGMKVVQTVSERT 824

Query: 825  ATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF-NNELGISYEH 883
            ATP  + D  D + LKDSL A+ NATQAADRI+Q+FRMQSFQRKQL  + ++E G+S + 
Sbjct: 825  ATPVLNGDIPDDICLKDSLNAVRNATQAADRIYQVFRMQSFQRKQLALYEDDEFGLSDQQ 884

Query: 884  ALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARK 943
            ALSL+A+K+ R  QG+GLA++AAIQIQKKFRGW KRKEFL+IRQRIVKIQAHVRGHQ RK
Sbjct: 885  ALSLLASKACRSGQGEGLANAAAIQIQKKFRGWTKRKEFLIIRQRIVKIQAHVRGHQVRK 944

Query: 944  KYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQT 1003
            +Y+PIIWSVGILEKVILRWRRKGSGLRGFR  +    P       KEDDYD+LK+GRKQ+
Sbjct: 945  QYKPIIWSVGILEKVILRWRRKGSGLRGFRPASQNKVPEQPSESPKEDDYDYLKEGRKQS 1004

Query: 1004 EERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGLEDIADGDLDLIDI 1063
            E + +KAL RVKSMVQYPEARAQYRR+L VVE  R+TK  N+     E+  DG  DLIDI
Sbjct: 1005 EVKFKKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKGGNLNLINSEETVDGVEDLIDI 1064

Query: 1064 DSLLDDDTFMSVAFE 1078
            D LLDD+ F+ +AF+
Sbjct: 1065 DMLLDDENFLPIAFD 1079

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557555|ref|XP_003547081.1| PREDICTED: calmodulin-binding transcription activator 2-like [Glycine max]

 Score = 1204 bits (3114), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 651/1096 (59%), Positives = 787/1096 (71%), Gaps = 26/1096 (2%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLF 60
            MA+  SY L   LD+QQLQ EAQHRWLRPAEICEIL NY+ FHI SEP +RPPSGSLFLF
Sbjct: 1    MAEGASYGLRRPLDIQQLQFEAQHRWLRPAEICEILRNYRMFHITSEPHNRPPSGSLFLF 60

Query: 61   DRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWML 120
            DRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGSVDVLHCYYAHGE+NENFQRR YWML
Sbjct: 61   DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWML 120

Query: 121  EQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTS 180
            E D+MHIVFVHYLEV+GNK+ V + E +EV ++  K +S + S P + +   S  TDS S
Sbjct: 121  EPDMMHIVFVHYLEVKGNKNIVVNNEGDEVPTDSQKVTSPSSSLPTHHSCVSSLSTDSVS 180

Query: 181  PTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSS 240
            PT++L    EDADS    ED H ASS  H  +E    GN P  EK+ +G + SY + P S
Sbjct: 181  PTTSLMSLHEDADS----EDIHHASSGLHPLHESQHSGNSPLTEKIGAGSNSSYLMHPFS 236

Query: 241  ---VRSSIPG-DYVSHA-GHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAK 295
                +SSI G DY+    G     N     + QK  G+A W  VL+  + +  N P  A 
Sbjct: 237  GDNEQSSISGTDYIPVVHGDKFRGNDTAYTDGQKPHGMAPWGTVLQ-STAKLHNDPSLAS 295

Query: 296  LESNV---------QKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIM 346
              S +         Q+  IF   L+S+    E + SS  +Q NWQIP  DNS        
Sbjct: 296  FPSILPSSMGDVLEQEHTIFGDLLMSKSGLTEEAESSQSLQSNWQIPFEDNSGGMPMLTQ 355

Query: 347  DLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHS 406
              S  L+   D G GL    T +A    AP  + +F  +  E P+Q N   +  D +S  
Sbjct: 356  TQSFGLQFRSDYGTGLLGNETRNASSEIAPILY-SFHGEPKEQPMQQNYPQELEDGQSQH 414

Query: 407  QTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS-G 465
              KSNS +++  E TIN+  +VK  LL+ + +L+KVDSFSRW++KEL EV +L++QSS G
Sbjct: 415  ALKSNSANKVPDEETINYGLTVKSTLLDRDESLKKVDSFSRWITKELGEVADLNMQSSPG 474

Query: 466  IEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAK 525
            I WST+EC +V+DD+SLSPSLSQDQLFSI DFSPKW Y + EIEV++ G FLKS  EV  
Sbjct: 475  ISWSTDECQHVIDDTSLSPSLSQDQLFSINDFSPKWAYAESEIEVLIIGSFLKSQPEVTT 534

Query: 526  CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVK 585
            C WSCMF EVEVPAEVLADG+LCC+ P H VGRVPFY+TCSNRLACSEVREFD+  G  +
Sbjct: 535  CNWSCMFGEVEVPAEVLADGILCCQAPCHKVGRVPFYVTCSNRLACSEVREFDFREGFAR 594

Query: 586  DADISDIYGSSTSESFLHLRLERILSMRS-SPQNHLSEGLCEKQKLISKIIQLKEEEESY 644
            + D +D Y SST E   HLRLE  LS++   P NH  EG  EK+ LI K+I L+EEE+  
Sbjct: 595  NVDFADFYISST-EMLRHLRLEDFLSLKPVDPSNHSFEGDMEKRNLIFKLISLREEEDYS 653

Query: 645  QMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS 704
               E   E ++SQH+ K  +  +  KEKLYSWLL KV E+GKGP +LD++GQGVLHLAA 
Sbjct: 654  IKDEVTRELDISQHMVKEHLFHRQFKEKLYSWLLHKVTENGKGPNVLDEDGQGVLHLAAF 713

Query: 705  LGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEF 764
            LGYDWAI P ++AGV+INFRD++GWTALHWAA CGRE+TVAVL+S+GA  G LTDPSP F
Sbjct: 714  LGYDWAINPIISAGVNINFRDVNGWTALHWAASCGRERTVAVLVSMGADCGALTDPSPAF 773

Query: 765  PLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKT 824
            P  RT +DLASS GHKGISGFLAESSLT  L +L M+D    G  E S  K VQTVSE++
Sbjct: 774  PSGRTAADLASSYGHKGISGFLAESSLTHHLETLTMDDQKG-GQQEISGMKVVQTVSERS 832

Query: 825  ATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF--NNELGISYE 882
            ATP +  D  D + LKDSLTA+ NATQAADRIHQ++RMQSFQRKQLT++  ++ELG+S +
Sbjct: 833  ATPVHYCDIPDAICLKDSLTAVRNATQAADRIHQVYRMQSFQRKQLTQYEGDDELGLSDQ 892

Query: 883  HALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQAR 942
             ALSL+A+++ +  QGDGLA++AA+QIQKKFRGWKKRKEFL+IRQR+VKIQAHVRGHQ R
Sbjct: 893  QALSLLASRACKSGQGDGLANAAAVQIQKKFRGWKKRKEFLMIRQRVVKIQAHVRGHQIR 952

Query: 943  KKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQ 1002
            K+Y+PIIWSVGILEKVILRWRRKGSGLRGFR +A+   PN Q+  LKEDDYD+LK+GRKQ
Sbjct: 953  KQYKPIIWSVGILEKVILRWRRKGSGLRGFRPNAINKVPNQQNDSLKEDDYDYLKEGRKQ 1012

Query: 1003 TEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGLEDIADGDLDLID 1062
             EE++QKAL RVKSMVQYPEARAQYRRLL VVE  R+TK SN      E+  DG  DLID
Sbjct: 1013 KEEKIQKALSRVKSMVQYPEARAQYRRLLNVVEDFRQTKASNKGLINSEETVDGVEDLID 1072

Query: 1063 IDSLLDDDTFMSVAFE 1078
            ID LLDDD F+ +AF+
Sbjct: 1073 IDMLLDDDNFIPIAFD 1088

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510676|ref|XP_003524062.1| PREDICTED: calmodulin-binding transcription activator 2-like [Glycine max]

 Score = 1195 bits (3091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1092 (58%), Positives = 766/1092 (70%), Gaps = 60/1092 (5%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLF 60
            MA+R  + L PRLD+QQLQ+EAQHRWLRPAEICEIL NYQ F I SEPP+ PPSGSLFLF
Sbjct: 1    MAERSCFGLGPRLDLQQLQLEAQHRWLRPAEICEILRNYQMFQITSEPPNGPPSGSLFLF 60

Query: 61   DRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWML 120
            DRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGSVDVLHCYYAHGE+NENFQRR YWML
Sbjct: 61   DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWML 120

Query: 121  EQDLMHIVFVHYLEVQGNKSNVGDRE-SNEVTSNPGKHSSLTFSFPGNRTKAPSGITDST 179
            E D+MHIVFVHYL+V+ NK+NVG +  S+EVTS+  K SSL+  FP N    PSG TDS 
Sbjct: 121  EPDMMHIVFVHYLDVKVNKTNVGGKTYSDEVTSDSQKSSSLSSGFPRNYGSVPSGSTDSM 180

Query: 180  SPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPS 239
            SPTSTLT  CEDADSG   +              LP  G                     
Sbjct: 181  SPTSTLTSLCEDADSGDHGQ--------------LPVSG--------------------- 205

Query: 240  SVRSSIPGDYVSHA-GHIPNDNQDLMIECQKALGLASWEEVLEHCSGE-------NDNVP 291
                    +Y+ H  G     +    IE Q+A G+ASW+  +E  +GE       +    
Sbjct: 206  -------AEYIPHVLGDKSRASDTTYIEGQRAQGIASWDNTMEQSAGEYADPSLVSSTTI 258

Query: 292  PHAKLESNVQKENIFDGELLSRE--ASEENSGSSLPVQFNWQIPLADNSSHFLKSIMDLS 349
            P + + + +++ +   G+LL R+   +EE  GS  PVQ NWQIP  DN+          S
Sbjct: 259  PSSAVGNILEENHTVPGKLLGRKNALTEEERGSQ-PVQSNWQIPFEDNTGELPNWGFTQS 317

Query: 350  RDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTK 409
              LE   D G  L    T++A     PE F  F  +  E  V  N        +S    K
Sbjct: 318  LGLEFGSDYGASLLGDVTNNAGPEIVPELF-TFNGELKEQSVHQNFSKLYTHGQSQPTLK 376

Query: 410  SNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS-GIEW 468
            SNSE E+ GE +IN++ ++++ LL+GE +L+KVDSFSRWM+KE   VD+LH+QSS GI W
Sbjct: 377  SNSEYEVPGEASINYALTMRRGLLDGEESLKKVDSFSRWMTKEFAGVDDLHMQSSPGISW 436

Query: 469  STEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKW 528
            ST+ECG+V+DD+SL+ SLSQDQLFSI DFSPKW Y + EIEV++ G FLKS   VAKC W
Sbjct: 437  STDECGDVIDDTSLNLSLSQDQLFSINDFSPKWAYAESEIEVLIVGTFLKSQPVVAKCNW 496

Query: 529  SCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDAD 588
            SCMF EVEVPAEVLADG+LCC+ PPH +GRVPFY+TCSNR ACSEVREF+Y  G  ++  
Sbjct: 497  SCMFGEVEVPAEVLADGILCCQAPPHKIGRVPFYVTCSNRFACSEVREFEYREGFDRNIQ 556

Query: 589  ISDIYGSSTSESFLHLRLERILSMRS-SPQNHLSEGLCEKQKLISKIIQLKEEEESYQMV 647
             +D + +ST E  LHLRL  +LS+ S    N + EG  +K+ LI K+I LKEEEE     
Sbjct: 557  FADCFNNST-EMVLHLRLVGLLSLNSVRTSNQVFEGDMDKRSLIFKLISLKEEEEYSSKE 615

Query: 648  EANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGY 707
            E   E ++S+H  K  +  K +KEKLYSWLL KV E GKGP +LD+EGQGVLHL A+LGY
Sbjct: 616  ETTAEMDISKHKLKELMFHKQVKEKLYSWLLHKVTETGKGPLVLDEEGQGVLHLIAALGY 675

Query: 708  DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLS 767
            DWAI P +TAGV+INFRD++GWTALHWAA+CGRE+TVAVL+S+GAA G  TDP PEFP  
Sbjct: 676  DWAINPIITAGVNINFRDVNGWTALHWAAFCGRERTVAVLVSMGAAAGAWTDPCPEFPSG 735

Query: 768  RTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATP 827
            R+P+DLASS GHKGISGFLAES LT  L SL M D   DG  E S  K VQT SE+TATP
Sbjct: 736  RSPADLASSKGHKGISGFLAESLLTGHLESLTM-DENKDGRKETSGTKVVQTASERTATP 794

Query: 828  ANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF-NNELGISYEHALS 886
                D  D + LKDSL A+ NATQAADRI+Q+FRMQSFQRKQ  ++ ++E G+S + ALS
Sbjct: 795  VLYGDIPDAICLKDSLNAVRNATQAADRIYQVFRMQSFQRKQFAQYEDDEFGLSDQQALS 854

Query: 887  LVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYR 946
            L+A+K+ +  QG+GLA++AAIQIQKKFRGW KRKEFL+IRQRIVKIQAHVRGHQ RK+Y+
Sbjct: 855  LLASKTCKSGQGEGLANAAAIQIQKKFRGWTKRKEFLIIRQRIVKIQAHVRGHQVRKQYK 914

Query: 947  PIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEER 1006
            PIIWSVGILEKVILRWRRKGSGLRGFR  AL   P       KEDDYD+LK+GRKQ+E +
Sbjct: 915  PIIWSVGILEKVILRWRRKGSGLRGFRPAALNKVPEQPSESPKEDDYDYLKEGRKQSEVK 974

Query: 1007 LQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGLEDIADGDLDLIDIDSL 1066
             +KAL RVKSMVQYPEARAQYRR+L VVE  R+TK  N+     E+  DG  DLIDID L
Sbjct: 975  FKKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKGGNLNLINSEETVDGVEDLIDIDML 1034

Query: 1067 LDDDTFMSVAFE 1078
            LDD+ F+ +AF+
Sbjct: 1035 LDDENFLPIAFD 1046

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438552|ref|XP_004137052.1| PREDICTED: calmodulin-binding transcription activator 2-like [Cucumis sativus]

 Score = 1175 bits (3039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1091 (57%), Positives = 784/1091 (71%), Gaps = 59/1091 (5%)

Query: 14   DMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGH 73
            D++QL +EA+HRWLRPAEICEIL NY KF IASEPP RP SGSLFLFDRKVLRYFRKDGH
Sbjct: 10   DIEQLLVEAKHRWLRPAEICEILRNYTKFRIASEPPDRPSSGSLFLFDRKVLRYFRKDGH 69

Query: 74   NWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYL 133
             WRKKKDGKTVREAHEKLKVGS+DVLHCYYAHGE+NENFQRR YWMLE+ LMHIVFVHYL
Sbjct: 70   KWRKKKDGKTVREAHEKLKVGSIDVLHCYYAHGEENENFQRRSYWMLEEHLMHIVFVHYL 129

Query: 134  EVQGNKSNVGD-RESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTSPTSTLTLSCEDA 192
            EV+GN++NVG   E++EV+++  K  S ++S   N  +A S   DS SPTSTLT  CEDA
Sbjct: 130  EVKGNRTNVGAVVETDEVSTSSQKSRSSSYSSSHN--QAASENADSPSPTSTLTSFCEDA 187

Query: 193  DSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSS----VRSSIPG- 247
            D+     D++QA+SR H +   P+MGNG  + K D+G S  YF   SS      S++P  
Sbjct: 188  DN-----DTYQATSRFHSFPTSPKMGNGLLVNKPDAGQSNFYFPHSSSNNAEAWSTVPAV 242

Query: 248  DYVSHA---GHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNV---- 300
            DYV+     G   N     M+  QK L  ASWEE+L  C+     VP H  L S++    
Sbjct: 243  DYVTQVQKDGLGGNGGDTSMMGSQKTLSSASWEEILHQCTTGFQTVPSHV-LTSSIEPLP 301

Query: 301  ------QKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMDLSRDLEP 354
                  Q+ +  D  L S  A +E+ GS+L +  NWQ+P  DN+  F K  +D   DL  
Sbjct: 302  SGIVFGQENSTPDKLLTSNSAIKEDFGSALAMTSNWQVPFEDNTLSFSKEHVDHFPDLYS 361

Query: 355  AYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTKSNSES 414
              D+   L  Q++HDA      E FCA   +QNE  +  NL++Q ++ ES+S  + +S++
Sbjct: 362  VCDIDSRLTAQKSHDATFGRGHEMFCAHPGKQNE-EILPNLELQFKEGESYSTARLSSDN 420

Query: 415  EIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQ-SSGIEWSTEEC 473
            ++  EGTI++S ++KQ L++GE +L+KVDSFSRW+SKEL EVD+LH+  SSG+ W+T EC
Sbjct: 421  DMSKEGTISYSLTLKQSLMDGEESLKKVDSFSRWVSKELGEVDDLHMHPSSGLTWTTVEC 480

Query: 474  GNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFA 533
            G++VDDSSLSPS+S+DQLFSI  FSPKWT  D + EVVV G F+ ++     C WSCMF 
Sbjct: 481  GDMVDDSSLSPSISEDQLFSITAFSPKWTVADLDTEVVVIGRFMGNNNGT-NCHWSCMFG 539

Query: 534  EVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIY 593
            EVEVPAEVLADG+LCC  PPH+VGRVPFY+TCSNR+ACSEVREFDY+ GS +D +++DIY
Sbjct: 540  EVEVPAEVLADGILCCHAPPHSVGRVPFYVTCSNRVACSEVREFDYLAGSAQDVNVTDIY 599

Query: 594  GSSTSESF-LHLRLERILSMR-SSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANP 651
             +  +E   +HLR ER+LS+  S P N LSE   EKQ LI ++I +KEE+++Y   + NP
Sbjct: 600  NAGATEELRMHLRFERLLSLEPSDPSNDLSESALEKQNLIRELITIKEEDDTYGE-DPNP 658

Query: 652  EKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAI 711
            + +  QH  K  +  K+MKEKLYSWL+ KV E GKGP ILD EGQGV+HLAA+LGYDWAI
Sbjct: 659  QNDQIQHQSKEFLFVKLMKEKLYSWLIHKVIEGGKGPNILDSEGQGVIHLAAALGYDWAI 718

Query: 712  KPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPS 771
            +P V AGVSINFRD++GWTALHWAA CGRE TV  L++L A+PGL++DPSPE PL   P+
Sbjct: 719  RPIVAAGVSINFRDINGWTALHWAALCGRELTVGTLITLDASPGLMSDPSPEVPLGIVPA 778

Query: 772  DLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDN 831
            DLAS NGHKGISGFLAE++LTS +                     VQTVSE+ ATP ND 
Sbjct: 779  DLASINGHKGISGFLAEAALTSYV--------------------TVQTVSERRATPVNDG 818

Query: 832  DESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF-NNELGISYEHALSLVAA 890
                 LSLKDSLTA+CNATQAA RI+QI R+QSFQRK+L+E   +E G S    LS + A
Sbjct: 819  FMPGDLSLKDSLTAVCNATQAAGRIYQILRVQSFQRKKLSECGTDEFGSSDNSILSFMKA 878

Query: 891  KSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIW 950
            ++ +    +  AH+AA+QIQKKFRGW+ RKEFLLIRQRIVKIQAHVRGHQ RK+Y+ I+W
Sbjct: 879  RARKSGLSNNPAHAAAVQIQKKFRGWRMRKEFLLIRQRIVKIQAHVRGHQVRKQYKKIVW 938

Query: 951  SVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHM--PLKEDDYDFLKDGRKQTEERLQ 1008
            SVG+++K+ILRWRRKGSGLRGFR DA+  +P P  M  P KEDDYDFLK+GR+QTEER Q
Sbjct: 939  SVGMIDKIILRWRRKGSGLRGFRSDAVPKDP-PALMAPPTKEDDYDFLKEGRRQTEERFQ 997

Query: 1009 KALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGL-EDIADGDLDLIDIDSLL 1067
            KAL RVKSM QYPE R QYRRLLTVV+  RETK S MV     E++ +GD D+IDID+LL
Sbjct: 998  KALTRVKSMAQYPEGRDQYRRLLTVVQKCRETKGSAMVVTTTSEEVIEGD-DMIDIDTLL 1056

Query: 1068 DDDTFMSVAFE 1078
            DDD  MS+ F+
Sbjct: 1057 DDDALMSMTFD 1067

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445841|ref|XP_003593198.1| Calmodulin-binding transcription activator [Medicago truncatula] gi|355482246|gb|AES63449.1| Calmodulin-binding transcription activator [Medicago truncatula]

 Score = 1144 bits (2960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1106 (56%), Positives = 759/1106 (68%), Gaps = 82/1106 (7%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPS------ 54
            MA+  S+ L PRLD+QQLQ EAQHRWLRPAEICEIL NY+ FHI  EP +RPPS      
Sbjct: 1    MAEPPSFGLGPRLDIQQLQFEAQHRWLRPAEICEILRNYRMFHITPEPHTRPPSTVIAYV 60

Query: 55   ------GSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGED 108
                  GSLFLFDRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGSVD LHCYYAHGE+
Sbjct: 61   SDKLFSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDALHCYYAHGEE 120

Query: 109  NENFQRRCYWMLEQDLMHIVFVHYLEVQGNKSNVG-DRESNEVTSNPGKHSSLTFSFPGN 167
            NENFQRR YW+LEQD  HIVFVHYLEV+ NKSN+G + +SNEV S+  K +S +   P  
Sbjct: 121  NENFQRRSYWLLEQD-THIVFVHYLEVKSNKSNIGGNADSNEVISDSQKVNSPSSGIPAT 179

Query: 168  RTKAPSGITDSTSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMD 227
             +  PS  TDS SPTS+ T   EDADSG    D  Q+S                      
Sbjct: 180  YSSVPSLSTDSMSPTSSYTSLREDADSG----DHGQSSV--------------------- 214

Query: 228  SGLSYSYFLSPSSVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGEN 287
            SG+ Y     P   R +  G            N    I+     G ASW+ VL+  + E 
Sbjct: 215  SGMDYI----PPFSRDTFRG------------NGATCID-----GQASWDTVLQ-STAEL 252

Query: 288  DNVP--------PHAKLESNV--QKENIFDGELLSREASEENSGSSLPVQFNWQIPLADN 337
               P        P   L SN+  Q++NI     +SR      +GSS P+Q NWQIP  DN
Sbjct: 253  HADPSLVSFTSIPSGSL-SNILDQEDNILGDFSMSRSGLAIGAGSSQPLQSNWQIPFEDN 311

Query: 338  SSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQM 397
            + H       LS  LE A D G GL    + +   +  P  F    + + +L  QN L+ 
Sbjct: 312  TGHMPTFTQSLS--LEFASDYGTGLLGNESDNGSSIIDPVLFSFHGEPKEKLAQQNYLE- 368

Query: 398  QQRDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVD 457
            ++ D       KSNS  E+  E TIN+   V++ LL+ + +L KVDSF+RW++K L EVD
Sbjct: 369  EKVDGHPRDDLKSNSTKEVPSEETINYPLPVRRTLLDRDESLRKVDSFNRWITKALGEVD 428

Query: 458  NLHVQSS-GIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMF 516
            +L++QSS GI WS ++CG+V+DD+SLSPSLSQDQL+SI DFSPKW Y + + EV++ G F
Sbjct: 429  DLNMQSSPGISWSADDCGHVIDDTSLSPSLSQDQLYSITDFSPKWAYAESDTEVLIIGSF 488

Query: 517  LKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVRE 576
            LKS  +V  C WSCMF EVEVPAEV+A+G+LCC+ PPH VGRVPFY+TC+NRLACSEVRE
Sbjct: 489  LKSQPDVTACNWSCMFGEVEVPAEVVANGILCCQAPPHKVGRVPFYVTCANRLACSEVRE 548

Query: 577  FDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRS-SPQNHLSEGLCEKQKLISKII 635
            FD+  G  ++ D +D + SS ++  LHLRLE  LS++   P N   EG  EK+ LI K+I
Sbjct: 549  FDFRDGYSRNVDYTDFFNSS-NDMLLHLRLEEFLSLKPVHPSNQTFEGDTEKRSLILKLI 607

Query: 636  QLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEG 695
             L+EEEE     E   E ++S+H  K  +  +  KEKLYSWLL KV E GKGP +LD +G
Sbjct: 608  SLREEEEYSSKEEQTVEMDISRHKVKKHLFHRQFKEKLYSWLLHKVTESGKGPNVLDKDG 667

Query: 696  QGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPG 755
            QGVLHLAA LGYDWAI   + AGV+INFRD++GWTALHWAA CGRE+TV  L+ +GA  G
Sbjct: 668  QGVLHLAAGLGYDWAIILILAAGVNINFRDVNGWTALHWAASCGRERTVGALVHMGADCG 727

Query: 756  LLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAK 815
             LTDPSPEFP  RT +DLASSNG+KG+SGFLAESSLTS L SL ++D    G  E S  K
Sbjct: 728  ALTDPSPEFPSGRTAADLASSNGNKGLSGFLAESSLTSHLESLTVDDLHKGGQQEVSRTK 787

Query: 816  AVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTE--- 872
            AVQTVSE+TATP   ND  D L LKDSLTA+ NATQAADRIHQ+FRMQSFQRKQLT+   
Sbjct: 788  AVQTVSERTATPVIYNDMPDALCLKDSLTAVRNATQAADRIHQVFRMQSFQRKQLTQDED 847

Query: 873  FNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKI 932
             ++E G+  + ALSL+A+K+ +  QGDGL ++AA QIQKKFRGWKKRKEFLLIRQRIVKI
Sbjct: 848  DDDEFGLLDQRALSLLASKARKSGQGDGLVNAAATQIQKKFRGWKKRKEFLLIRQRIVKI 907

Query: 933  QAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDD 992
            QAHVRGHQ RK+Y+ +IWSVGILEK+ILRWRRKGSGLRGFR +AL   P+ Q+  LKEDD
Sbjct: 908  QAHVRGHQVRKQYKTVIWSVGILEKIILRWRRKGSGLRGFRPEALNKAPSQQNDSLKEDD 967

Query: 993  YDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGLED 1052
            YD+LK+GRKQ EE++QKAL RVKSMVQYPEARAQYRR+L VVE  R+ K+ NM  +  E+
Sbjct: 968  YDYLKEGRKQKEEKIQKALSRVKSMVQYPEARAQYRRVLNVVEDFRQKKDCNMGMSS-EE 1026

Query: 1053 IADGDLDLIDIDSLLDDDTFMSVAFE 1078
              DG  DLIDID LLDD+ F  +AF+
Sbjct: 1027 TVDGVEDLIDIDMLLDDENFNPIAFD 1052

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297794005|ref|XP_002864887.1| calmodulin-binding protein [Arabidopsis lyrata subsp. lyrata] gi|297310722|gb|EFH41146.1| calmodulin-binding protein [Arabidopsis lyrata subsp. lyrata]

 Score = 1100 bits (2845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1103 (55%), Positives = 765/1103 (69%), Gaps = 66/1103 (5%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLF 60
            MADRGS+  APRLD++QL  EAQHRWLRPAEICEIL N+QKFHIASEPP+RPPSGSLFLF
Sbjct: 1    MADRGSFGFAPRLDIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLF 60

Query: 61   DRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWML 120
            DRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGS+DVLHCYYAHGEDNENFQRRCYWML
Sbjct: 61   DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRCYWML 120

Query: 121  EQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTS 180
            EQDLMHIVFVHYLEV+GN+ +    + N   S  G  S                +  + +
Sbjct: 121  EQDLMHIVFVHYLEVKGNRMSTSGTKENHSNSLSGTGS--------------VNVDSTAT 166

Query: 181  PTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSY----FL 236
             +S L+  CEDADSG    DS QASS      E PQ      M  +++    SY     L
Sbjct: 167  RSSILSPLCEDADSG----DSRQASSSLQQNPE-PQTVVPQIMHHLNANTMNSYNTTSVL 221

Query: 237  SPSSVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKL 296
                  +S PG  +    H    N+    + Q++  + +W+   E+      N+P +A L
Sbjct: 222  GNRDGWTSAPGIGIVSQVH---GNRVKESDSQRSGDVPAWDASFENSLARYQNLPYNAPL 278

Query: 297  ESNVQKENIF---------DGELLSREASEENSGSSLPVQFNWQ---IPLADNSSHFLKS 344
             +  Q  N            G LL+ E   +     L  Q NWQ   IP+ + S    K 
Sbjct: 279  -TQTQPSNFGLIPMEGKTEKGSLLTAEHLRD----PLRNQVNWQLIYIPVQE-SVPLQKW 332

Query: 345  IMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVES 404
             MD    +  A DL   LF Q  H+    G    F + L  QN+ P  ++ Q    + E+
Sbjct: 333  PMDSHSGMTDATDL--ALFGQGAHEN--FGT---FSSLLGSQNQQP--SSFQAPFTNNEA 383

Query: 405  HSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS 464
                K   E  I+ E + N +  +++ LL  E +L+KVDSFSRW+SKEL E+++L +QSS
Sbjct: 384  AYIPKLGPEDLIY-EASANQTLPLRKALLKKEDSLKKVDSFSRWVSKELGEMEDLQMQSS 442

Query: 465  --GIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQE 522
              GI W++ EC N    SSLSPSLS+DQ F++IDF PKWT TD E+EV+V G FL S QE
Sbjct: 443  SGGIAWTSVECENAAAGSSLSPSLSEDQRFTMIDFWPKWTQTDSEVEVMVIGTFLLSPQE 502

Query: 523  VAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVG 582
            V    WSCMF EVEVPA++L DGVLCC  PPH VGRVPFYITCS+R +CSEVREFD++ G
Sbjct: 503  VTSYSWSCMFGEVEVPADILVDGVLCCHAPPHEVGRVPFYITCSDRFSCSEVREFDFLPG 562

Query: 583  SVKDADISDIYGSSTSESFLHLRLERILSMRSSPQ-NHLSEGLCEKQKLISKIIQLKEEE 641
            S +  + +DIYG++T E+ LH+R E +L++RSS Q +H+ E + EK++ ISKI+ LK+E+
Sbjct: 563  STRKLNATDIYGANTIETSLHVRFENLLALRSSVQEHHIFENVGEKRRKISKIMLLKDEK 622

Query: 642  ESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHL 701
            ES  ++    EK+L++   K +++++  ++KLY WL+ KV E+GKGP ILD++GQGVLHL
Sbjct: 623  ES--LLPGTIEKDLAELEAKDRLIREEFEDKLYLWLIHKVTEEGKGPNILDEDGQGVLHL 680

Query: 702  AASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPS 761
            AA+LGYDWAIKP + AGVSINFRD +GW+ALHWAA+ GRE TVAVL+SLGA  G L DPS
Sbjct: 681  AAALGYDWAIKPILAAGVSINFRDANGWSALHWAAFSGREDTVAVLVSLGADAGALADPS 740

Query: 762  PEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVS 821
            PE PL +T +DLA  NGH+GISGFLAESSLTS L  L + D+ ++ + + S AKAV TV+
Sbjct: 741  PEHPLGKTAADLAYGNGHRGISGFLAESSLTSYLEKLTV-DAKENSSADSSGAKAVLTVA 799

Query: 822  EKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF--NNELGI 879
            E+TATP +  D  + LS+KDSLTA+ NATQAADR+HQ+FRMQSFQRKQL+E   + +  I
Sbjct: 800  ERTATPMSYGDVPETLSMKDSLTAVFNATQAADRLHQVFRMQSFQRKQLSELGGDKKFDI 859

Query: 880  SYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGH 939
            S E A+S  AAK+ +P   +G  H+AA+QIQKK+RGWKKRKEFLLIRQRIVKIQAHVRGH
Sbjct: 860  SDELAVSFAAAKTKKPGHSNGAVHAAAVQIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGH 919

Query: 940  QARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDG 999
            Q RK+YR IIWSVG+LEK+ILRWRRKGSGLRGF+RD +     P     +EDDYDFLK+G
Sbjct: 920  QVRKQYRAIIWSVGLLEKIILRWRRKGSGLRGFKRDTITKPTEPVCPAPQEDDYDFLKEG 979

Query: 1000 RKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETK--ESNMVPNGLEDIADGD 1057
            RKQTEERL+KAL RVKSM QYPEARAQYRRLLTVVEG RE +   S+ + N  E+ A+ +
Sbjct: 980  RKQTEERLKKALTRVKSMAQYPEARAQYRRLLTVVEGFRENEASSSSALKNNTEEAANYN 1039

Query: 1058 LD--LIDIDSLLDDDTFMSVAFE 1078
             +  LIDIDSLLDDDTFMS+AFE
Sbjct: 1040 EEDDLIDIDSLLDDDTFMSIAFE 1062

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30697970|ref|NP_201227.3| calmodulin-binding transcription activator 2 [Arabidopsis thaliana] gi|79332100|ref|NP_001032135.1| calmodulin-binding transcription activator 2 [Arabidopsis thaliana] gi|75324343|sp|Q6NPP4.1|CMTA2_ARATH RecName: Full=Calmodulin-binding transcription activator 2; AltName: Full=Ethylene-induced calmodulin-binding protein c; Short=AtER66; Short=EICBP.c; AltName: Full=Signal-responsive protein 4 gi|38603814|gb|AAR24652.1| At5g64220 [Arabidopsis thaliana] gi|110738680|dbj|BAF01265.1| Calmodulin-binding transcription activator 2 [Arabidopsis thaliana] gi|225879158|dbj|BAH30649.1| hypothetical protein [Arabidopsis thaliana] gi|332010473|gb|AED97856.1| calmodulin-binding transcription activator 2 [Arabidopsis thaliana] gi|332010474|gb|AED97857.1| calmodulin-binding transcription activator 2 [Arabidopsis thaliana]

 Score = 1092 bits (2823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1105 (54%), Positives = 755/1105 (68%), Gaps = 82/1105 (7%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLF 60
            MADRGS+  APRLD++QL  EAQHRWLRPAEICEIL N+QKFHIASEPP+RPPSGSLFLF
Sbjct: 1    MADRGSFGFAPRLDIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLF 60

Query: 61   DRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWML 120
            DRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGS+DVLHCYYAHGEDNENFQRRCYWML
Sbjct: 61   DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRCYWML 120

Query: 121  EQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTS 180
            EQDLMHIVFVHYLEV+GN+ +    + N   S  G  S                +  + +
Sbjct: 121  EQDLMHIVFVHYLEVKGNRMSTSGTKENHSNSLSGTGS--------------VNVDSTAT 166

Query: 181  PTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSS 240
             +S L+  CEDADSG    DS QASS      E PQ      M   ++    SY  + +S
Sbjct: 167  RSSILSPLCEDADSG----DSRQASSSLQQNPE-PQTVVPQIMHHQNASTINSY--NTTS 219

Query: 241  VRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKL---- 296
            V  +  G   +H   +   N       Q++  + +W+   E+      N+P +A L    
Sbjct: 220  VLGNRDGWTSAHGNRVKGSN------SQRSGDVPAWDASFENSLARYQNLPYNAPLTQTQ 273

Query: 297  ---------ESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMD 347
                     E   +K ++   E L          + L  Q NWQ P+ + S    K  MD
Sbjct: 274  PSTFGLIPMEGKTEKGSLLTSEHLR---------NPLQSQVNWQTPVQE-SVPLQKWPMD 323

Query: 348  LSRDLEPAYDLGDGLFEQRTHD-----ACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDV 402
                +  A DL   LF Q  H+     + LLG+            + P  NN        
Sbjct: 324  SHSGMTDATDL--ALFGQGAHENFGTFSSLLGS----QDQQSSSFQAPFTNN-------- 369

Query: 403  ESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQ 462
            E+    K   E  I+ E + N +  +++ LL  E +L+KVDSFSRW+SKEL E+++L +Q
Sbjct: 370  EAAYIPKLGPEDLIY-EASANQTLPLRKALLKKEDSLKKVDSFSRWVSKELGEMEDLQMQ 428

Query: 463  SS--GIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSH 520
            SS  GI W++ EC N    SSLSPSLS+DQ F++IDF PKWT TD E+EV+V G FL S 
Sbjct: 429  SSSGGIAWTSVECENAAAGSSLSPSLSEDQRFTMIDFWPKWTQTDSEVEVMVIGTFLLSP 488

Query: 521  QEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYI 580
            QEV    WSCMF EVEVPA++L DGVLCC  PPH VGRVPFYITCS+R +CSEVREFD++
Sbjct: 489  QEVTSYSWSCMFGEVEVPADILVDGVLCCHAPPHEVGRVPFYITCSDRFSCSEVREFDFL 548

Query: 581  VGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQ-NHLSEGLCEKQKLISKIIQLKE 639
             GS +  + +DIYG++T E+ LHLR E +L++R S Q +H+ E + EK++ ISKI+ LK+
Sbjct: 549  PGSTRKLNATDIYGANTIETSLHLRFENLLALRCSVQEHHIFENVGEKRRKISKIMLLKD 608

Query: 640  EEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVL 699
            E+E    +    EK+L++   K +++++  ++KLY WL+ KV E+GKGP ILD++GQGVL
Sbjct: 609  EKEP--PLPGTIEKDLTELEAKERLIREEFEDKLYLWLIHKVTEEGKGPNILDEDGQGVL 666

Query: 700  HLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTD 759
            HLAA+LGYDWAIKP + AGVSINFRD +GW+ALHWAA+ GRE TVAVL+SLGA  G L D
Sbjct: 667  HLAAALGYDWAIKPILAAGVSINFRDANGWSALHWAAFSGREDTVAVLVSLGADAGALAD 726

Query: 760  PSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQT 819
            PSPE PL +T +DLA  NGH+GISGFLAESSLTS L  L + D+ ++ + + S AKAV T
Sbjct: 727  PSPEHPLGKTAADLAYGNGHRGISGFLAESSLTSYLEKLTV-DAKENSSADSSGAKAVLT 785

Query: 820  VSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF--NNEL 877
            V+E+TATP +  D  + LS+KDSLTA+ NATQAADR+HQ+FRMQSFQRKQL+E   +N+ 
Sbjct: 786  VAERTATPMSYGDVPETLSMKDSLTAVLNATQAADRLHQVFRMQSFQRKQLSELGGDNKF 845

Query: 878  GISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVR 937
             IS E A+S  AAK+ +     G  H+AA+QIQKK+RGWKKRKEFLLIRQRIVKIQAHVR
Sbjct: 846  DISDELAVSFAAAKTKKSGHSSGAVHAAAVQIQKKYRGWKKRKEFLLIRQRIVKIQAHVR 905

Query: 938  GHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLK 997
            GHQ RK+YR IIWSVG+LEK+ILRWRRKGSGLRGF+RD +     P     +EDDYDFLK
Sbjct: 906  GHQVRKQYRAIIWSVGLLEKIILRWRRKGSGLRGFKRDTISKPTEPVCPAPQEDDYDFLK 965

Query: 998  DGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETK--ESNMVPNGLEDIAD 1055
            +GRKQTEERLQKAL RVKSM QYPEARAQYRRLLTVVEG RE +   S+ + N  E+ A+
Sbjct: 966  EGRKQTEERLQKALTRVKSMAQYPEARAQYRRLLTVVEGFRENEASSSSALKNNTEEAAN 1025

Query: 1056 GDLD--LIDIDSLLDDDTFMSVAFE 1078
             + +  LIDIDSLLDDDTFMS+AFE
Sbjct: 1026 YNEEDDLIDIDSLLDDDTFMSLAFE 1050

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9759398|dbj|BAB09853.1| ER66 protein-like [Arabidopsis thaliana]

 Score = 1041 bits (2693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/1096 (53%), Positives = 728/1096 (66%), Gaps = 130/1096 (11%)

Query: 13   LDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDG 72
            +D++QL  EAQHRWLRPAEICEIL N+QKFHIASEPP+RPPSGSLFLFDRKVLRYFRKDG
Sbjct: 19   VDIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDG 78

Query: 73   HNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHY 132
            HNWRKKKDGKTV+EAHEKLKVGS+DVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHY
Sbjct: 79   HNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHY 138

Query: 133  LEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTSPTSTLTLSCEDA 192
            LEV+GN+ +    + N   S  G  S                +  + + +S L+  CEDA
Sbjct: 139  LEVKGNRMSTSGTKENHSNSLSGTGSV--------------NVDSTATRSSILSPLCEDA 184

Query: 193  DSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSVRSSIPGDYVSH 252
            DSG     +    + AH        GN                         + G     
Sbjct: 185  DSG-----NRDGWTSAH--------GN------------------------RVKGSNSQR 207

Query: 253  AGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKL-------------ESN 299
            +G +P                 +W+   E+      N+P +A L             E  
Sbjct: 208  SGDVP-----------------AWDASFENSLARYQNLPYNAPLTQTQPSTFGLIPMEGK 250

Query: 300  VQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLG 359
             +K     G LL+ E       S  PVQ +  +PL        K  MD    +  A DL 
Sbjct: 251  TEK-----GSLLTSEHLRNPLQSQTPVQES--VPLQ-------KWPMDSHSGMTDATDLA 296

Query: 360  DGLFEQRTHD-----ACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTKSNSES 414
              LF Q  H+     + LLG+            + P  NN        E+    K   E 
Sbjct: 297  --LFGQGAHENFGTFSSLLGS----QDQQSSSFQAPFTNN--------EAAYIPKLGPED 342

Query: 415  EIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS--GIEWSTEE 472
             I+ E + N +  +++ LL  E +L+KVDSFSRW+SKEL E+++L +QSS  GI W++ E
Sbjct: 343  LIY-EASANQTLPLRKALLKKEDSLKKVDSFSRWVSKELGEMEDLQMQSSSGGIAWTSVE 401

Query: 473  CGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMF 532
            C N    SSLSPSLS+DQ F++IDF PKWT TD E+EV+V G FL S QEV    WSCMF
Sbjct: 402  CENAAAGSSLSPSLSEDQRFTMIDFWPKWTQTDSEVEVMVIGTFLLSPQEVTSYSWSCMF 461

Query: 533  AEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDI 592
             EVEVPA++L DGVLCC  PPH VGRVPFYITCS+R +CSEVREFD++ GS +  + +DI
Sbjct: 462  GEVEVPADILVDGVLCCHAPPHEVGRVPFYITCSDRFSCSEVREFDFLPGSTRKLNATDI 521

Query: 593  YGSSTSESFLHLRLERILSMRSSPQ-NHLSEGLCEKQKLISKIIQLKEEEESYQMVEANP 651
            YG++T E+ LHLR E +L++R S Q +H+ E + EK++ ISKI+ LK+E+E    +    
Sbjct: 522  YGANTIETSLHLRFENLLALRCSVQEHHIFENVGEKRRKISKIMLLKDEKEP--PLPGTI 579

Query: 652  EKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAI 711
            EK+L++   K +++++  ++KLY WL+ KV E+GKGP ILD++GQGVLHLAA+LGYDWAI
Sbjct: 580  EKDLTELEAKERLIREEFEDKLYLWLIHKVTEEGKGPNILDEDGQGVLHLAAALGYDWAI 639

Query: 712  KPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPS 771
            KP + AGVSINFRD +GW+ALHWAA+ GRE TVAVL+SLGA  G L DPSPE PL +T +
Sbjct: 640  KPILAAGVSINFRDANGWSALHWAAFSGREDTVAVLVSLGADAGALADPSPEHPLGKTAA 699

Query: 772  DLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDN 831
            DLA  NGH+GISGFLAESSLTS L  L + D+ ++ + + S AKAV TV+E+TATP +  
Sbjct: 700  DLAYGNGHRGISGFLAESSLTSYLEKLTV-DAKENSSADSSGAKAVLTVAERTATPMSYG 758

Query: 832  DESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF--NNELGISYEHALSLVA 889
            D  + LS+KDSLTA+ NATQAADR+HQ+FRMQSFQRKQL+E   +N+  IS E A+S  A
Sbjct: 759  DVPETLSMKDSLTAVLNATQAADRLHQVFRMQSFQRKQLSELGGDNKFDISDELAVSFAA 818

Query: 890  AKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPII 949
            AK+ +     G  H+AA+QIQKK+RGWKKRKEFLLIRQRIVKIQAHVRGHQ RK+YR II
Sbjct: 819  AKTKKSGHSSGAVHAAAVQIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQYRAII 878

Query: 950  WSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQK 1009
            WSVG+LEK+ILRWRRKGSGLRGF+RD +     P     +EDDYDFLK+GRKQTEERLQK
Sbjct: 879  WSVGLLEKIILRWRRKGSGLRGFKRDTISKPTEPVCPAPQEDDYDFLKEGRKQTEERLQK 938

Query: 1010 ALGRVKSMVQYPEARAQYRRLLTVVEGSRETK-----ESNMVPNGLEDIADGDLD--LID 1062
            AL RVKSM QYPEARAQYRRLLTVVEG RE +      S+ + N  E+ A+ + +  LID
Sbjct: 939  ALTRVKSMAQYPEARAQYRRLLTVVEGFRENEVTIASSSSALKNNTEEAANYNEEDDLID 998

Query: 1063 IDSLLDDDTFMSVAFE 1078
            IDSLLDDDTFMS+AFE
Sbjct: 999  IDSLLDDDTFMSLAFE 1014

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186521534|ref|NP_001119195.1| calmodulin-binding transcription activator 1 [Arabidopsis thaliana] gi|341940364|sp|Q9FY74.2|CMTA1_ARATH RecName: Full=Calmodulin-binding transcription activator 1; AltName: Full=Ethylene-induced calmodulin-binding protein b; Short=EICBP.b; AltName: Full=Signal-responsive protein 2 gi|332004006|gb|AED91389.1| calmodulin-binding transcription activator 1 [Arabidopsis thaliana]

 Score = 1020 bits (2638), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 572/1100 (52%), Positives = 722/1100 (65%), Gaps = 125/1100 (11%)

Query: 1    MADRGSY-ALAP--RLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSL 57
            M DR S+ ++ P  +LDM+QL  EAQHRWLRP EICEIL NY KFHIASE P+RP SGSL
Sbjct: 1    MVDRRSFGSITPPLQLDMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSL 60

Query: 58   FLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCY 117
            FLFDRKVLRYFRKDGHNWRKKKDGKT+REAHEKLKVGS+DVLHCYYAHGE NENFQRRCY
Sbjct: 61   FLFDRKVLRYFRKDGHNWRKKKDGKTIREAHEKLKVGSIDVLHCYYAHGEANENFQRRCY 120

Query: 118  WMLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITD 177
            WMLEQ LMHIVFVHYLEV+GN++++G +E+N  + N                 A   I  
Sbjct: 121  WMLEQHLMHIVFVHYLEVKGNRTSIGMKENNSNSVN---------------GTASVNIDS 165

Query: 178  STSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLS 237
            + SPTSTL+  CEDAD+G    DS QASS      E PQ GN            Y +  +
Sbjct: 166  TASPTSTLSSLCEDADTG----DSQQASSVLRPSPE-PQTGN-----------RYGWTPA 209

Query: 238  PSSVR-SSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKL 296
            P     S + G+ V  +            + Q+ + + + + V    +  +D  P    L
Sbjct: 210  PGMRNVSQVHGNRVRES------------DSQRLVDVRALDTVGNSLTRFHDQ-PYCNNL 256

Query: 297  ESNVQKENIFDGELLSREASE-------ENSGSSLPVQFNWQIPLADNSSHFLKSIMDLS 349
             + +Q  N     +L  E SE       E+  + L  QFNWQ    D++        DL+
Sbjct: 257  LTQMQPSNT--DSMLVEENSEKGGRLKAEHIRNPLQTQFNWQ----DDT--------DLA 302

Query: 350  RDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTK 409
                        LFEQ   D       E F + L  +N  P             S+    
Sbjct: 303  ------------LFEQSAQDNF-----ETFSSLLGSENLQPFGI----------SYQAPP 335

Query: 410  SNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS--GIE 467
            SN +SE            V + L   E +L+KVDSFS+W  KEL E+++L +QSS   I 
Sbjct: 336  SNMDSEY---------MPVMKILRRSEDSLKKVDSFSKWAIKELGEMEDLQMQSSRGDIA 386

Query: 468  WSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCK 527
            W+T EC       SLSPSLS+DQ F+I+DF PK   TD E+EV+V G FL S QEV K  
Sbjct: 387  WTTVECETAAAGISLSPSLSEDQRFTIVDFWPKSAKTDAEVEVMVIGTFLLSPQEVTKYN 446

Query: 528  WSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDA 587
            WSCMF EVEVPAE+L DGVLCC  PPH  G VPFY+TCSNR ACSEVREFD++ GS +  
Sbjct: 447  WSCMFGEVEVPAEILVDGVLCCHAPPHTAGHVPFYVTCSNRFACSEVREFDFLSGSTQKI 506

Query: 588  DISDIYGSSTSESFLHLRLERILSMRS-SPQNHLSEGLCEKQKLISKIIQLKEEEESYQM 646
            + +D+YG+ T+E+ L LR E++L+ R    ++H+ E + +K++ ISKI+ LKEE+E   +
Sbjct: 507  NATDVYGTYTNEASLQLRFEKMLAHRDFVHEHHIFEDVGDKRRQISKIMLLKEEKE--YL 564

Query: 647  VEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLG 706
            +    +++ ++   K Q+ +++ +E+LY WL+ KV E+GKGP ILD++GQG+LH  A+LG
Sbjct: 565  LPGTYQRDSTKQEPKGQLFRELFEEELYIWLIHKVTEEGKGPNILDEDGQGILHFVAALG 624

Query: 707  YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPL 766
            YDWAIKP + AGV+INFRD +GW+ALHWAA+ GRE+TVAVL+SLGA  G LTDPSPE PL
Sbjct: 625  YDWAIKPVLAAGVNINFRDANGWSALHWAAFSGREETVAVLVSLGADAGALTDPSPELPL 684

Query: 767  SRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTAT 826
             +T +DLA +NGH+GISGFLAESSLTS L  L + DS ++        KAVQTVSE+TA 
Sbjct: 685  GKTAADLAYANGHRGISGFLAESSLTSYLEKLTV-DSKENSPANSCGEKAVQTVSERTAA 743

Query: 827  PANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNE--LGISYEHA 884
            P    D  + LSLKDSLTA+ NATQAADR+HQ+FRMQSFQRKQL +  ++  + IS + A
Sbjct: 744  PMTYGDVPEKLSLKDSLTAVRNATQAADRLHQVFRMQSFQRKQLCDIGDDEKIDISDQLA 803

Query: 885  LSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKK 944
            +S  A+K+  P QGD     AA  IQKK+RGWKKRKEFLLIRQRIVKIQAHVRGHQ RK+
Sbjct: 804  VSFAASKTKNPGQGDVSLSCAATHIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQ 863

Query: 945  YRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQ--------HMPLKEDDYDFL 996
            YR +IWSVG+LEK+ILRWRRKG+GLRGF+R+A+     P+         +P +ED+YD+L
Sbjct: 864  YRTVIWSVGLLEKIILRWRRKGNGLRGFKRNAVAKTVEPEPPVSAICPRIP-QEDEYDYL 922

Query: 997  KDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESN--MVPNGLEDIA 1054
            K+GRKQTEERLQKAL RVKSMVQYPEAR QYRRLLTVVEG RE + S+   + N  E+  
Sbjct: 923  KEGRKQTEERLQKALTRVKSMVQYPEARDQYRRLLTVVEGFRENEASSSASINNKEEEAV 982

Query: 1055 DGDL-DLIDIDSLLDDDTFM 1073
            + +  D IDI+SLL+DDT M
Sbjct: 983  NCEEDDFIDIESLLNDDTLM 1002

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9955528|emb|CAC05467.1| putative protein [Arabidopsis thaliana]

 Score = 1019 bits (2635), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 571/1100 (51%), Positives = 722/1100 (65%), Gaps = 125/1100 (11%)

Query: 1    MADRGSY-ALAP--RLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSL 57
            M DR S+ ++ P  +LDM+QL  EAQHRWLRP EICEIL NY KFHIASE P+RP SGSL
Sbjct: 1    MVDRRSFGSITPPLQLDMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSL 60

Query: 58   FLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCY 117
            FLFDRKVLRYFRKDGHNWRKKKDGKT+REAHEKLKVGS+DVLHCYYAHGE NENFQRRCY
Sbjct: 61   FLFDRKVLRYFRKDGHNWRKKKDGKTIREAHEKLKVGSIDVLHCYYAHGEANENFQRRCY 120

Query: 118  WMLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITD 177
            WMLEQ LMHIVFVHYL+V+GN++++G +E+N  + N                 A   I  
Sbjct: 121  WMLEQHLMHIVFVHYLQVKGNRTSIGMKENNSNSVN---------------GTASVNIDS 165

Query: 178  STSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLS 237
            + SPTSTL+  CEDAD+G    DS QASS      E PQ GN            Y +  +
Sbjct: 166  TASPTSTLSSLCEDADTG----DSQQASSVLRPSPE-PQTGN-----------RYGWTPA 209

Query: 238  PSSVR-SSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKL 296
            P     S + G+ V  +            + Q+ + + + + V    +  +D  P    L
Sbjct: 210  PGMRNVSQVHGNRVRES------------DSQRLVDVRALDTVGNSLTRFHDQ-PYCNNL 256

Query: 297  ESNVQKENIFDGELLSREASE-------ENSGSSLPVQFNWQIPLADNSSHFLKSIMDLS 349
             + +Q  N     +L  E SE       E+  + L  QFNWQ    D++        DL+
Sbjct: 257  LTQMQPSNT--DSMLVEENSEKGGRLKAEHIRNPLQTQFNWQ----DDT--------DLA 302

Query: 350  RDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTK 409
                        LFEQ   D       E F + L  +N  P             S+    
Sbjct: 303  ------------LFEQSAQDNF-----ETFSSLLGSENLQPFGI----------SYQAPP 335

Query: 410  SNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS--GIE 467
            SN +SE            V + L   E +L+KVDSFS+W  KEL E+++L +QSS   I 
Sbjct: 336  SNMDSEY---------MPVMKILRRSEDSLKKVDSFSKWAIKELGEMEDLQMQSSRGDIA 386

Query: 468  WSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCK 527
            W+T EC       SLSPSLS+DQ F+I+DF PK   TD E+EV+V G FL S QEV K  
Sbjct: 387  WTTVECETAAAGISLSPSLSEDQRFTIVDFWPKSAKTDAEVEVMVIGTFLLSPQEVTKYN 446

Query: 528  WSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDA 587
            WSCMF EVEVPAE+L DGVLCC  PPH  G VPFY+TCSNR ACSEVREFD++ GS +  
Sbjct: 447  WSCMFGEVEVPAEILVDGVLCCHAPPHTAGHVPFYVTCSNRFACSEVREFDFLSGSTQKI 506

Query: 588  DISDIYGSSTSESFLHLRLERILSMRS-SPQNHLSEGLCEKQKLISKIIQLKEEEESYQM 646
            + +D+YG+ T+E+ L LR E++L+ R    ++H+ E + +K++ ISKI+ LKEE+E   +
Sbjct: 507  NATDVYGTYTNEASLQLRFEKMLAHRDFVHEHHIFEDVGDKRRQISKIMLLKEEKE--YL 564

Query: 647  VEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLG 706
            +    +++ ++   K Q+ +++ +E+LY WL+ KV E+GKGP ILD++GQG+LH  A+LG
Sbjct: 565  LPGTYQRDSTKQEPKGQLFRELFEEELYIWLIHKVTEEGKGPNILDEDGQGILHFVAALG 624

Query: 707  YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPL 766
            YDWAIKP + AGV+INFRD +GW+ALHWAA+ GRE+TVAVL+SLGA  G LTDPSPE PL
Sbjct: 625  YDWAIKPVLAAGVNINFRDANGWSALHWAAFSGREETVAVLVSLGADAGALTDPSPELPL 684

Query: 767  SRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTAT 826
             +T +DLA +NGH+GISGFLAESSLTS L  L + DS ++        KAVQTVSE+TA 
Sbjct: 685  GKTAADLAYANGHRGISGFLAESSLTSYLEKLTV-DSKENSPANSCGEKAVQTVSERTAA 743

Query: 827  PANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNE--LGISYEHA 884
            P    D  + LSLKDSLTA+ NATQAADR+HQ+FRMQSFQRKQL +  ++  + IS + A
Sbjct: 744  PMTYGDVPEKLSLKDSLTAVRNATQAADRLHQVFRMQSFQRKQLCDIGDDEKIDISDQLA 803

Query: 885  LSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKK 944
            +S  A+K+  P QGD     AA  IQKK+RGWKKRKEFLLIRQRIVKIQAHVRGHQ RK+
Sbjct: 804  VSFAASKTKNPGQGDVSLSCAATHIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQ 863

Query: 945  YRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQ--------HMPLKEDDYDFL 996
            YR +IWSVG+LEK+ILRWRRKG+GLRGF+R+A+     P+         +P +ED+YD+L
Sbjct: 864  YRTVIWSVGLLEKIILRWRRKGNGLRGFKRNAVAKTVEPEPPVSAICPRIP-QEDEYDYL 922

Query: 997  KDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESN--MVPNGLEDIA 1054
            K+GRKQTEERLQKAL RVKSMVQYPEAR QYRRLLTVVEG RE + S+   + N  E+  
Sbjct: 923  KEGRKQTEERLQKALTRVKSMVQYPEARDQYRRLLTVVEGFRENEASSSASINNKEEEAV 982

Query: 1055 DGDL-DLIDIDSLLDDDTFM 1073
            + +  D IDI+SLL+DDT M
Sbjct: 983  NCEEDDFIDIESLLNDDTLM 1002

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	1078
TAIR|locus:2173368	1050	AT5G64220 [Arabidopsis thalian	0.796	0.818	0.477	4.8e-271
TAIR|locus:2060405	1032	SR1 "signal responsive 1" [Ara	0.358	0.374	0.428	8.6e-209
TAIR|locus:2019534	1016	AT1G67310 [Arabidopsis thalian	0.478	0.507	0.375	8.2e-128
TAIR|locus:2130125	923	AT4G16150 [Arabidopsis thalian	0.528	0.617	0.327	7.8e-114
UNIPROTKB|Q9Y6Y1	1673	CAMTA1 "Calmodulin-binding tra	0.102	0.065	0.452	5.2e-30
MGI|MGI:2140230	1682	Camta1 "calmodulin binding tra	0.102	0.065	0.452	4.4e-29
UNIPROTKB|F1P8J0	1204	CAMTA2 "Uncharacterized protei	0.100	0.089	0.442	6e-29
UNIPROTKB|J9NZ90	1214	CAMTA2 "Uncharacterized protei	0.100	0.088	0.442	6.3e-29
UNIPROTKB|F1RFY4	1201	CAMTA2 "Uncharacterized protei	0.100	0.089	0.442	2.4e-28
UNIPROTKB|O94983	1202	CAMTA2 "Calmodulin-binding tra	0.100	0.089	0.442	3.1e-28

TAIR|locus:2173368 AT5G64220 [Arabidopsis thaliana (taxid:3702)]

 Score = 1912 (678.1 bits), Expect = 4.8e-271, Sum P(2) = 4.8e-271
 Identities = 427/895 (47%), Positives = 555/895 (62%)

Query:   197 DAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSVRSSIPGDYVSHAGHI 256
             D+ DS QASS      E PQ      M   ++    SY  + +SV  +  G   +H   +
Sbjct:   179 DSGDSRQASSSLQQNPE-PQTVVPQIMHHQNASTINSY--NTTSVLGNRDGWTSAHGNRV 235

Query:   257 PNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKL-ESNVQKENIFDGELLSREA 315
                N       Q++  + +W+   E+      N+P +A L ++      +   E  + + 
Sbjct:   236 KGSNS------QRSGDVPAWDASFENSLARYQNLPYNAPLTQTQPSTFGLIPMEGKTEKG 289

Query:   316 S---EENSGSSLPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACL 372
             S    E+  + L  Q NWQ P+ + S    K  MD    +  A DL   LF Q  H+   
Sbjct:   290 SLLTSEHLRNPLQSQVNWQTPVQE-SVPLQKWPMDSHSGMTDATDLA--LFGQGAHEN-- 344

Query:   373 LGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTKSNSESEIHGEGTINFSFSVKQKL 432
              G    F + L  Q++    ++ Q    + E+    K   E  I+ E + N +  +++ L
Sbjct:   345 FGT---FSSLLGSQDQQ--SSSFQAPFTNNEAAYIPKLGPEDLIY-EASANQTLPLRKAL 398

Query:   433 LNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS--GIEWSTEECGNVVXXXXXXXXXXXXX 490
             L  E +L+KVDSFSRW+SKEL E+++L +QSS  GI W++ EC N               
Sbjct:   399 LKKEDSLKKVDSFSRWVSKELGEMEDLQMQSSSGGIAWTSVECENAAAGSSLSPSLSEDQ 458

Query:   491 XXXIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCR 550
                +IDF PKWT TD E+EV+V G FL S QEV    WSCMF EVEVPA++L DGVLCC 
Sbjct:   459 RFTMIDFWPKWTQTDSEVEVMVIGTFLLSPQEVTSYSWSCMFGEVEVPADILVDGVLCCH 518

Query:   551 IPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERIL 610
              PPH VGRVPFYITCS+R +CSEVREFD++ GS +  + +DIYG++T E+ LHLR E +L
Sbjct:   519 APPHEVGRVPFYITCSDRFSCSEVREFDFLPGSTRKLNATDIYGANTIETSLHLRFENLL 578

Query:   611 SMRSSPQ-NHLSEGLCXXXXXXXXXXXXXXXXXXYQMVEANPEKNLSQHVEKYQILQKIM 669
             ++R S Q +H+ E +                      +    EK+L++   K +++++  
Sbjct:   579 ALRCSVQEHHIFENV--GEKRRKISKIMLLKDEKEPPLPGTIEKDLTELEAKERLIREEF 636

Query:   670 KEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGW 729
             ++KLY WL+ KV E+GKGP ILD++GQGVLHLAA+LGYDWAIKP + AGVSINFRD +GW
Sbjct:   637 EDKLYLWLIHKVTEEGKGPNILDEDGQGVLHLAAALGYDWAIKPILAAGVSINFRDANGW 696

Query:   730 TALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAEX 789
             +ALHWAA+ GRE TVAVL+SLGA  G L DPSPE PL +T +DLA  NGH+GISGFLAE 
Sbjct:   697 SALHWAAFSGREDTVAVLVSLGADAGALADPSPEHPLGKTAADLAYGNGHRGISGFLAES 756

Query:   790 XXXXXXXXXKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNA 849
                       + D+ ++ + + S AKAV TV+E+TATP +  D  + LS+KDSLTA+ NA
Sbjct:   757 SLTSYLEKLTV-DAKENSSADSSGAKAVLTVAERTATPMSYGDVPETLSMKDSLTAVLNA 815

Query:   850 TQAADRIHQIFRMQSFQRKQLTEF--NNELGISYEHALSLVAAKSLRPVQGDGLAHSAAI 907
             TQAADR+HQ+FRMQSFQRKQL+E   +N+  IS E A+S  AAK+ +     G  H+AA+
Sbjct:   816 TQAADRLHQVFRMQSFQRKQLSELGGDNKFDISDELAVSFAAAKTKKSGHSSGAVHAAAV 875

Query:   908 QIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGS 967
             QIQKK+RGWKKRKEFLLIRQRIVKIQAHVRGHQ RK+YR IIWSVG+LEK+ILRWRRKGS
Sbjct:   876 QIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQYRAIIWSVGLLEKIILRWRRKGS 935

Query:   968 GLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQY 1027
             GLRGF+RD +     P     +EDDYDFLK+GRKQTEERLQKAL RVKSM QYPEARAQY
Sbjct:   936 GLRGFKRDTISKPTEPVCPAPQEDDYDFLKEGRKQTEERLQKALTRVKSMAQYPEARAQY 995

Query:  1028 RRLLTVVEGSRETK--ESNMVPNGXXXXXXXXXXXXXXXXXXXXX--TFMSVAFE 1078
             RRLLTVVEG RE +   S+ + N                        TFMS+AFE
Sbjct:   996 RRLLTVVEGFRENEASSSSALKNNTEEAANYNEEDDLIDIDSLLDDDTFMSLAFE 1050

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2060405 SR1 "signal responsive 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 806 (288.8 bits), Expect = 8.6e-209, Sum P(3) = 8.6e-209
 Identities = 177/413 (42%), Positives = 243/413 (58%)

Query:   411 NSESEIHGEGTINFSFSVKQKLLNG---EGNLEKVDSFSRWMSKELEEV-------DNLH 460
             N+ S +       +  ++KQ LL+G   E  L+K+DSF+RWMSKEL +V       ++  
Sbjct:   363 NAISNLASNEKAPYLSTMKQHLLHGALGEEGLKKMDSFNRWMSKELGDVGVIADANESFT 422

Query:   461 VQSSGIEWS---TEECGNV------VXXXXXXXXXXXXXXXXIIDFSPKWTYTDPEIEVV 511
               SS   W    +E+  N       +                I DFSP W Y   E+ V 
Sbjct:   423 QSSSRTYWEEVESEDGSNGHNSRRDMDGYVMSPSLSKEQLFSINDFSPSWAYVGCEVVVF 482

Query:   512 VTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLAC 571
             VTG FLK+ +E    +WSCMF + EVPA+V+++G+L C  P H  GRVPFY+TCSNRLAC
Sbjct:   483 VTGKFLKTREETEIGEWSCMFGQTEVPADVISNGILQCVAPMHEAGRVPFYVTCSNRLAC 542

Query:   572 SEVREFDYIVGS--VKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCXXXX 629
             SEVREF+Y V    V D +  D    ST +  L  R  ++L  +S   + +S G      
Sbjct:   543 SEVREFEYKVAESQVFDREADD---ESTID-ILEARFVKLLCSKSENTSPVS-GNDSDLS 597

Query:   630 XXXXXXXXXXXXXXYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPC 689
                            Q+ +    + +SQ   K  +LQ+ +KE L+SWLL+K+ E GKGP 
Sbjct:   598 QLSEKISLLLFENDDQLDQMLMNE-ISQENMKNNLLQEFLKESLHSWLLQKIAEGGKGPS 656

Query:   690 ILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLS 749
             +LD+ GQGVLH AASLGY+WA++PT+ AGVS++FRD++GWTALHWAA+ GRE+ +  L++
Sbjct:   657 VLDEGGQGVLHFAASLGYNWALEPTIIAGVSVDFRDVNGWTALHWAAFFGRERIIGSLIA 716

Query:   750 LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAEXXXXXXXXXXKMND 802
             LGAAPG LTDP+P+FP   TPSDLA +NGHKGI+G+L+E           +ND
Sbjct:   717 LGAAPGTLTDPNPDFPSGSTPSDLAYANGHKGIAGYLSEYALRAHVSLLSLND 769

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=TAS;IPI

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0042742 "defense response to bacterium" evidence=IGI;IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0050832 "defense response to fungus" evidence=IGI

TAIR|locus:2019534 AT1G67310 [Arabidopsis thaliana (taxid:3702)]

 Score = 870 (311.3 bits), Expect = 8.2e-128, Sum P(3) = 8.2e-128
 Identities = 207/552 (37%), Positives = 307/552 (55%)

Query:   494 IIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPP 553
             I D SP W Y +   +V++ G FL    E     WSCMF   +VP E++ +GV+ C  P 
Sbjct:   448 IQDISPDWGYANETTKVIIIGSFLCDPTEST---WSCMFGNAQVPFEIIKEGVIRCEAPQ 504

Query:   554 HAVGRVPFYITCSNRLACSEVREFDY------IVGSVKDADISDIYGSSTSESFLHLR-L 606
                G+V   IT  + L CSE+REF+Y            +   SD+  +S +E  L +R +
Sbjct:   505 CGPGKVNLCITSGDGLLCSEIREFEYREKPDTCCPKCSEPQTSDM-STSPNELILLVRFV 563

Query:   607 ERILSMRSSPQNHLSEGLCXXXXXXXXXXXXXXXXXXYQMVEANPEKNLSQHVEKYQILQ 666
             + +LS RSS +    E                       +++ +     +  V+   +LQ
Sbjct:   564 QTLLSDRSSERKSNLESGNDKLLTKLKADDDQWRHVIGTIIDGSASSTST--VD--WLLQ 619

Query:   667 KIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDL 726
             +++K+KL +WL  + C++    C L  + QG++H+ A LG++WA  P +  GV+++FRD+
Sbjct:   620 ELLKDKLDTWLSSRSCDEDYITCSLSKQEQGIIHMVAGLGFEWAFYPILAHGVNVDFRDI 679

Query:   727 SGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
              GW+ALHWAA  G EK VA L++ GA+ G +TDPS + P  +T + +A+SNGHKG++G+L
Sbjct:   680 KGWSALHWAAQFGSEKMVAALIASGASAGAVTDPSRQDPNGKTAASIAASNGHKGLAGYL 739

Query:   787 AEXXXXXXXXXXKMNDSADD-GALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTA 845
             +E           + ++ +     +    K + ++SE++  P+ + D+   +SLKD+L A
Sbjct:   740 SEVALTNHLSSLTLEETENSKDTAQVQTEKTLNSISEQS--PSGNEDQ---VSLKDTLAA 794

Query:   846 ICNATQAADRIHQIFRMQSFQ-RKQ----LTEFNNELGISYEHALSLVAAKSLRPVQGDG 900
             + NA QAA RI   FR  SF+ RKQ    L     E G+  E    + A   L   +G  
Sbjct:   795 VRNAAQAAARIQAAFRAHSFRKRKQREAALVACLQEYGMYCEDIEGISAMSKLTFGKGRN 854

Query:   901 LAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVIL 960
               +SAA+ IQK FRG+K RK FL +RQ++VKIQAHVRG+Q RK Y+ I W+V IL+KV+L
Sbjct:   855 Y-NSAALSIQKNFRGYKDRKCFLELRQKVVKIQAHVRGYQIRKNYKVICWAVRILDKVVL 913

Query:   961 RWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQ-TEERLQKALGRVKSMVQ 1019
             RWRRKG GLRGFR+D      +        +D D LK  RKQ  +  + +A  RV SM  
Sbjct:   914 RWRRKGVGLRGFRQDVESTEDS--------EDEDILKVFRKQKVDVAVNEAFSRVLSMSN 965

Query:  1020 YPEARAQYRRLL 1031
              PEAR QY R+L
Sbjct:   966 SPEARQQYHRVL 977

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2130125 AT4G16150 [Arabidopsis thaliana (taxid:3702)]

 Score = 732 (262.7 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
 Identities = 201/613 (32%), Positives = 305/613 (49%)

Query:   432 LLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGIE--WSTEECGNVVXXXXXXXXXXXX 489
             L NG G+    DSF RW++  + +     V    +E  ++  +  +              
Sbjct:   315 LNNGYGSQ---DSFGRWVNNFISDSPG-SVDDPSLEAVYTPGQDSSTPPTVFHSHSDIPE 370

Query:   490 XXXXIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCC 549
                 I D SP W Y+  + +++VTG F  S Q + +    C+  E+ VPAE L  GV  C
Sbjct:   371 QVFNITDVSPAWAYSTEKTKILVTGFFHDSFQHLGRSNLICICGELRVPAEFLQMGVYRC 430

Query:   550 RIPPHAVGRVPFYITCSNRLACSEVREFDY-IVGSVKDADISDIYGSSTSESFLHLRLER 608
              +PP + G V  Y++       S++  F++  V  ++ A   D       E    +RL  
Sbjct:   431 FLPPQSPGVVNLYLSVDGNKPISQLFSFEHRSVQFIEKAIPQDDQLYKWEEFEFQVRLAH 490

Query:   609 ILSMRSSPQNHLSEGLC----XXXXXXXXXXXXXXXXXXYQM--VEANPEKNLSQHVEKY 662
             +L   S+  + L+  +                       Y M  ++AN E    Q   + 
Sbjct:   491 LLFTSSNKISVLTSKISPENLLEAKKLASRTSHLLNSWAYLMKSIQAN-EVPFDQ--ARD 547

Query:   663 QILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSIN 722
              + +  +K +L  WLL KV E+ +     D +G GV+HL A LGY W+I     A +S++
Sbjct:   548 HLFELTLKNRLKEWLLEKVIEN-RNTKEYDSKGLGVIHLCAVLGYTWSILLFSWANISLD 606

Query:   723 FRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 782
             FRD  GWTALHWAAY GREK VA LLS GA P L+TDP+ EF    T +DLA   G+ G+
Sbjct:   607 FRDKQGWTALHWAAYYGREKMVAALLSAGARPNLVTDPTKEFLGGCTAADLAQQKGYDGL 666

Query:   783 SGFLAEXXXXXXXXXXKMNDSADDGALEDSIAKAVQTV-SEKTATPANDNDESDVLSLKD 841
             + FLAE          +  D    G    +I+  ++T+ +EK++ P N N+E    SLKD
Sbjct:   667 AAFLAEKCLVA-----QFKDMQTAG----NISGNLETIKAEKSSNPGNANEEEQ--SLKD 715

Query:   842 SLTAICNATQAADRIHQIFRMQSFQ-RKQLTEFNNELGISYEHALSLVAAKSLRPVQGDG 900
             +L A   A +AA RI   FR    + R     F ++     E A +++AA  ++    + 
Sbjct:   716 TLAAYRTAAEAAARIQGAFREHELKVRSSAVRFASK----EEEAKNIIAAMKIQHAFRNF 771

Query:   901 LAH---SAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEK 957
                   +AA +IQ +F+ WK R+EFL +R++ ++IQA  RG Q R++Y+ I WSVG+LEK
Sbjct:   772 EVRRKIAAAARIQYRFQTWKMRREFLNMRKKAIRIQAAFRGFQVRRQYQKITWSVGVLEK 831

Query:   958 VILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSM 1017
              ILRWR K  G RG +         P      E   DF K  +KQ EERL++++ +V++M
Sbjct:   832 AILRWRLKRKGFRGLQVS------QPDEKEGSEAVEDFYKTSQKQAEERLERSVVKVQAM 885

Query:  1018 VQYPEARAQYRRL 1030
              +  +A+  YRR+
Sbjct:   886 FRSKKAQQDYRRM 898

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

UNIPROTKB|Q9Y6Y1 CAMTA1 "Calmodulin-binding transcription activator 1" [Homo sapiens (taxid:9606)]

 Score = 262 (97.3 bits), Expect = 5.2e-30, Sum P(5) = 5.2e-30
 Identities = 52/115 (45%), Positives = 71/115 (61%)

Query:    23 QHRWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKD 80
             +HRW    EI   L  ++K    + + P +RP +GS+ L++RK ++Y RKDG+ W+K+KD
Sbjct:    71 RHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKY-RKDGYCWKKRKD 129

Query:    81 GKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
             GKT RE H KLKV  V+ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct:   130 GKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNP--DIVLVHYLNV 182

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

MGI|MGI:2140230 Camta1 "calmodulin binding transcription activator 1" [Mus musculus (taxid:10090)]

 Score = 262 (97.3 bits), Expect = 4.4e-29, Sum P(5) = 4.4e-29
 Identities = 52/115 (45%), Positives = 71/115 (61%)

Query:    23 QHRWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKD 80
             +HRW    EI   L  ++K    + + P +RP +GS+ L++RK ++Y RKDG+ W+K+KD
Sbjct:    71 RHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKY-RKDGYCWKKRKD 129

Query:    81 GKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
             GKT RE H KLKV  V+ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct:   130 GKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNP--DIVLVHYLNV 182

GO:0003674 "molecular_function" evidence=ND

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1P8J0 CAMTA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 248 (92.4 bits), Expect = 6.0e-29, Sum P(4) = 6.0e-29
 Identities = 50/113 (44%), Positives = 69/113 (61%)

Query:    25 RWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
             RW    EI   L  ++K    ++  P +RP +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct:    40 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 98

Query:    83 TVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
             T RE H KLKV  ++ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct:    99 TTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 149

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|J9NZ90 CAMTA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 248 (92.4 bits), Expect = 6.3e-29, Sum P(4) = 6.3e-29
 Identities = 50/113 (44%), Positives = 69/113 (61%)

Query:    25 RWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
             RW    EI   L  ++K    ++  P +RP +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct:    63 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 121

Query:    83 TVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
             T RE H KLKV  ++ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct:   122 TTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 172

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|F1RFY4 CAMTA2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 248 (92.4 bits), Expect = 2.4e-28, Sum P(4) = 2.4e-28
 Identities = 50/113 (44%), Positives = 69/113 (61%)

Query:    25 RWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
             RW    EI   L  ++K    ++  P +RP +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct:    40 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 98

Query:    83 TVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
             T RE H KLKV  ++ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct:    99 TTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 149

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|O94983 CAMTA2 "Calmodulin-binding transcription activator 2" [Homo sapiens (taxid:9606)]

 Score = 248 (92.4 bits), Expect = 3.1e-28, Sum P(4) = 3.1e-28
 Identities = 50/113 (44%), Positives = 69/113 (61%)

Query:    25 RWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
             RW    EI   L  ++K    ++  P +RP +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct:    40 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 98

Query:    83 TVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
             T RE H KLKV  ++ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct:    99 TTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 149

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003682 "chromatin binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0008134 "transcription factor binding" evidence=IGI

GO:0014898 "cardiac muscle hypertrophy in response to stress" evidence=IDA

GO:0042826 "histone deacetylase binding" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6NPP4	CMTA2_ARATH	No assigned EC number	0.5493	0.9489	0.9742	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: scaffold_803130.1 annotation not avaliable (1062 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	1078
pfam03859	119	pfam03859, CG-1, CG-1 domain	2e-71
smart01076	118	smart01076, CG-1, CG-1 domains are highly conserve	7e-65
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-12
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	9e-12
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	5e-10
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	6e-07
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	6e-07
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-06
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-05
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-05
pfam00612	21	pfam00612, IQ, IQ calmodulin-binding motif	6e-05
smart00015	23	smart00015, IQ, Calmodulin-binding motif	7e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	7e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-04
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	6e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	0.002
pfam01833	84	pfam01833, TIG, IPT/TIG domain	0.002
COG5022	1463	COG5022, COG5022, Myosin heavy chain [Cytoskeleton	0.003

>gnl|CDD|217766 pfam03859, CG-1, CG-1 domain

 Score =  232 bits (593), Expect = 2e-71
 Identities = 85/116 (73%), Positives = 100/116 (86%)

Query: 21  EAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKD 80
           EA+ RWLRP EI  IL N++K  I  EPP+RPPSGSLFL++RKV+RYFRKDG+NW+KKKD
Sbjct: 4   EAKSRWLRPEEIYAILQNFEKHFITLEPPTRPPSGSLFLYNRKVVRYFRKDGYNWKKKKD 63

Query: 81  GKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQ 136
           GKT REAHEKLKVG V+VL+CYYAHGEDN  FQRRCYW+L++DL HIV VHYL V+
Sbjct: 64  GKTTREAHEKLKVGGVEVLNCYYAHGEDNPTFQRRCYWLLDEDLEHIVLVHYLNVK 119

CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs. Length = 119

>gnl|CDD|198144 smart01076, CG-1, CG-1 domains are highly conserved domains of about 130 amino-acid residues

 Score =  214 bits (546), Expect = 7e-65
 Identities = 75/118 (63%), Positives = 87/118 (73%), Gaps = 4/118 (3%)

Query: 21  EAQHRWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKK 78
           EA+HRWL P EI  IL N+ K    + + PP+RP SGSLFLF+RK L+YFRKDG+NW+KK
Sbjct: 3   EAKHRWLTPEEIAAILINFDKHTEWLTTSPPTRPKSGSLFLFNRKKLKYFRKDGYNWKKK 62

Query: 79  KDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQ 136
           KDGKTVRE HEKLKVG ++ LHCYYAH E N  F RRCYW+L      IV VHYL V 
Sbjct: 63  KDGKTVREDHEKLKVGGIECLHCYYAHSEINPTFHRRCYWLL--QNPDIVLVHYLNVP 118

The domains contain a predicted bipartite NLS and are named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs. Length = 118

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 64.3 bits (157), Expect = 3e-12
 Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 6/104 (5%)

Query: 683 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK 742
           E+G      D++G+  LHLAA  G+   +K  +  G  +N RD  G T LH AA  G   
Sbjct: 28  ENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLD 87

Query: 743 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            V +LL  GA               RTP  LA+ NGH  +   L
Sbjct: 88  VVKLLLKHGADVNARDK------DGRTPLHLAAKNGHLEVVKLL 125

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 62.8 bits (153), Expect = 9e-12
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 690 ILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLS 749
             D++G+  LHLAAS G+   +K  +  G  +N +D  G T LH AA  G  + V +LL 
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLE 61

Query: 750 LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 782
            GA                TP  LA+ NG+  +
Sbjct: 62  KGADVNARDK------DGNTPLHLAARNGNLDV 88

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 56.9 bits (138), Expect = 5e-10
 Identities = 25/67 (37%), Positives = 33/67 (49%)

Query: 686 KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVA 745
           KG  +   +    LHLAA  G    +K  +  G  +N +D  G TALH AA  G  + V 
Sbjct: 19  KGADVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVK 78

Query: 746 VLLSLGA 752
           +LL  GA
Sbjct: 79  LLLEHGA 85

Length = 91

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 53.1 bits (128), Expect = 6e-07
 Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 17/127 (13%)

Query: 655 LSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIK-- 712
           L  H++ ++   +I++E     L+R  C     P   D  G   LH  A+          
Sbjct: 191 LHHHLQSFKPRARIVRE-----LIRAGC----DPAATDMLGNTPLHSMATGSSCKRSLVL 241

Query: 713 PTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSD 772
           P + AG+SIN R+  G T LH+AA     +    L++LGA    ++          TP  
Sbjct: 242 PLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVS------SDGNTPLS 295

Query: 773 LASSNGH 779
           L   N +
Sbjct: 296 LMVRNNN 302

Length = 471

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 51.4 bits (122), Expect = 6e-07
 Identities = 38/130 (29%), Positives = 47/130 (36%), Gaps = 14/130 (10%)

Query: 683 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT-------AGVSINFR-DLSGWTALHW 734
             G      D +G   LHLAA  G        V        A + +N   D  G T LHW
Sbjct: 94  ASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHW 153

Query: 735 AAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSL 794
           AA  G    V +LL  GA      DP+       T  D A+ NG   +   L +  L   
Sbjct: 154 AALNGDADIVELLLEAGA------DPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLS 207

Query: 795 LLSLKMNDSA 804
           LL   +   A
Sbjct: 208 LLKFNLEGVA 217

Length = 235

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 8/75 (10%)

Query: 678 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT----AGVSINFRDLSGWTALH 733
           ++ + E G      D +G   LHLAA  G        V      G  +N RD  G T LH
Sbjct: 56  VKLLLEKGADVNARDKDGNTPLHLAARNGN----LDVVKLLLKHGADVNARDKDGRTPLH 111

Query: 734 WAAYCGREKTVAVLL 748
            AA  G  + V +LL
Sbjct: 112 LAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 8/84 (9%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 758
           LHLAA  G    +K  +  G  +N  D    TALH AA  G  + V +LL  GA      
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGD--TDTALHLAARNGNLEIVKLLLEHGA------ 52

Query: 759 DPSPEFPLSRTPSDLASSNGHKGI 782
           D + +     T   LA+ NG+  I
Sbjct: 53  DVNAKDKDGNTALHLAARNGNLEI 76

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 25/61 (40%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 722 NFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKG 781
           N RD  G T LH AA  G  + V +LL  GA      D        RTP  LA+ NGH  
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADV-NAKDND-----GRTPLHLAAKNGHLE 54

Query: 782 I 782
           I
Sbjct: 55  I 55

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|201341 pfam00612, IQ, IQ calmodulin-binding motif

 Score = 40.4 bits (96), Expect = 6e-05
 Identities = 11/21 (52%), Positives = 16/21 (76%)

Query: 926 RQRIVKIQAHVRGHQARKKYR 946
           R+  +KIQA  RG+ ARK+Y+
Sbjct: 1   RKAAIKIQAAWRGYLARKRYK 21

Calmodulin-binding motif. Length = 21

>gnl|CDD|197470 smart00015, IQ, Calmodulin-binding motif

 Score = 40.4 bits (96), Expect = 7e-05
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 925 IRQRIVKIQAHVRGHQARKKYR 946
           + +  + IQA  RG+ ARK+Y+
Sbjct: 2   LTRAAIIIQAAWRGYLARKRYK 23

Short calmodulin-binding motif containing conserved Ile and Gln residues. Length = 23

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 40.2 bits (95), Expect = 7e-05
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 728 GWTALHWAAYCGREKTVAVLLSLGAAPGLLTD 759
           G T LH AA  G  + V +LL  GA       
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 21/51 (41%), Positives = 26/51 (50%)

Query: 698 VLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLL 748
            LH AA  G    +K  +  GV IN  D  G TALH AA  G  + + +LL
Sbjct: 4   ALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 43.3 bits (102), Expect = 6e-04
 Identities = 32/87 (36%), Positives = 39/87 (44%), Gaps = 7/87 (8%)

Query: 700 HLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTD 759
            LAAS G     +  +T G   N RD  G T LH A   G  + V VLL  GA P LL  
Sbjct: 88  QLAAS-GDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDK 146

Query: 760 PSPEFPLSRTPSDLASSNGHKGISGFL 786
                   +TP +LA  NG + +   L
Sbjct: 147 D------GKTPLELAEENGFREVVQLL 167

Length = 664

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 36.8 bits (86), Expect = 0.002
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 6/59 (10%)

Query: 728 GWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           G TALH AA  GR + V  LL  G       +         T   +A+ NG+  +   L
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDE------DGNTALHIAAENGNLEVLKLL 53

Length = 54

>gnl|CDD|216730 pfam01833, TIG, IPT/TIG domain

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 4/87 (4%)

Query: 493 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIP 552
            I   SP          + +TG    +  E  K  +      V V    ++   + C  P
Sbjct: 2   VITSISPATGPASGGTTITITGSNFGTDSEDTKVTFGGTECTVIV---SVSSTQIVCTTP 58

Query: 553 PHAVGRVPFYITCSNRLACSEVREFDY 579
             A G V   +T +  L+ S V  F Y
Sbjct: 59  AGAAGTVSVSVTVNGGLSSSPVT-FTY 84

This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognise a significant number of members. Length = 84

>gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton]

 Score = 41.2 bits (97), Expect = 0.003
 Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 10/130 (7%)

Query: 903  HSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRP-IIWSVGILEKVILR 961
             + A +IQ+  RG   R+ +L   +RI KIQ    G + R+     + W + I  + +L 
Sbjct: 745  DNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLS 804

Query: 962  WRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYP 1021
                  G R   R  L      Q    +E      K    +  E   KA   ++   +  
Sbjct: 805  ----LLGSRKEYRSYLACIIKLQKTIKRE-----KKLRETEEVEFSLKAEVLIQKFGRSL 855

Query: 1022 EARAQYRRLL 1031
            +A+ ++  L 
Sbjct: 856  KAKKRFSLLK 865

Length = 1463

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	1078
KOG0520	975	consensus Uncharacterized conserved protein, conta	100.0
PF03859	118	CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domain	100.0
PHA02946	446	ankyin-like protein; Provisional	99.97
PHA02876	682	ankyrin repeat protein; Provisional	99.97
PHA03095	471	ankyrin-like protein; Provisional	99.97
PHA02876	682	ankyrin repeat protein; Provisional	99.97
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.97
PHA03095	471	ankyrin-like protein; Provisional	99.97
PHA02946	446	ankyin-like protein; Provisional	99.96
PHA03100	480	ankyrin repeat protein; Provisional	99.96
PHA02874	434	ankyrin repeat protein; Provisional	99.96
PHA02874	434	ankyrin repeat protein; Provisional	99.96
PHA02878	477	ankyrin repeat protein; Provisional	99.96
PHA03100	480	ankyrin repeat protein; Provisional	99.95
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.95
PHA02878	477	ankyrin repeat protein; Provisional	99.95
KOG0510	929	consensus Ankyrin repeat protein [General function	99.95
PHA02730	672	ankyrin-like protein; Provisional	99.95
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.95
PHA02989	494	ankyrin repeat protein; Provisional	99.95
PHA02875	413	ankyrin repeat protein; Provisional	99.95
PHA02791	284	ankyrin-like protein; Provisional	99.94
PHA02917	661	ankyrin-like protein; Provisional	99.94
PHA02989	494	ankyrin repeat protein; Provisional	99.94
PHA02798	489	ankyrin-like protein; Provisional	99.93
PHA02791	284	ankyrin-like protein; Provisional	99.93
KOG0510	929	consensus Ankyrin repeat protein [General function	99.93
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.93
PHA02875	413	ankyrin repeat protein; Provisional	99.92
PHA02798	489	ankyrin-like protein; Provisional	99.92
PHA02730	672	ankyrin-like protein; Provisional	99.92
PHA02917	661	ankyrin-like protein; Provisional	99.92
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.92
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.92
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.92
PHA02792	631	ankyrin-like protein; Provisional	99.89
PHA02859	209	ankyrin repeat protein; Provisional	99.87
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.87
KOG0508	615	consensus Ankyrin repeat protein [General function	99.87
PHA02795	437	ankyrin-like protein; Provisional	99.86
KOG0508	615	consensus Ankyrin repeat protein [General function	99.85
PHA02859	209	ankyrin repeat protein; Provisional	99.84
PHA02795	437	ankyrin-like protein; Provisional	99.83
PHA02792	631	ankyrin-like protein; Provisional	99.81
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.79
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.77
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.77
PHA02743	166	Viral ankyrin protein; Provisional	99.77
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.76
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.76
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.74
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.74
PHA02884	300	ankyrin repeat protein; Provisional	99.73
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.72
PHA02743	166	Viral ankyrin protein; Provisional	99.72
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.72
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.71
PHA02741	169	hypothetical protein; Provisional	99.71
KOG0514	452	consensus Ankyrin repeat protein [General function	99.69
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.68
PHA02741	169	hypothetical protein; Provisional	99.68
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.67
PHA02736	154	Viral ankyrin protein; Provisional	99.66
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.66
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.65
PHA02736	154	Viral ankyrin protein; Provisional	99.64
PHA02884	300	ankyrin repeat protein; Provisional	99.62
KOG0514	452	consensus Ankyrin repeat protein [General function	99.6
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.58
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.5
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.5
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.47
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.45
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.4
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.4
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.39
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.34
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.33
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.28
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.27
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.26
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.25
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.24
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.23
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.23
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.22
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.18
KOG0520	975	consensus Uncharacterized conserved protein, conta	99.13
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.11
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.05
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.04
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.68
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.53
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.46
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	98.4
PF13606	30	Ank_3: Ankyrin repeat	98.37
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.3
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.28
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.25
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.24
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.21
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.18
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.14
KOG0522	560	consensus Ankyrin repeat protein [General function	98.13
KOG0522	560	consensus Ankyrin repeat protein [General function	98.13
PF13606	30	Ank_3: Ankyrin repeat	98.12
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	98.12
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.01
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	97.93
KOG0521	785	consensus Putative GTPase activating proteins (GAP	97.89
KOG2384	223	consensus Major histocompatibility complex protein	97.86
KOG0511	516	consensus Ankyrin repeat protein [General function	97.58
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	97.49
cd01175	85	IPT_COE IPT domain of the COE family (Col/Olf-1/EB	97.45
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.41
KOG2384	223	consensus Major histocompatibility complex protein	97.41
KOG0511	516	consensus Ankyrin repeat protein [General function	97.28
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.18
COG5022	1463	Myosin heavy chain [Cytoskeleton]	97.01
KOG0521	785	consensus Putative GTPase activating proteins (GAP	96.96
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	96.64
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	96.48
PTZ00014	821	myosin-A; Provisional	96.3
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.9
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	95.87
smart00015	26	IQ Short calmodulin-binding motif containing conse	95.87
PTZ00014	821	myosin-A; Provisional	95.65
KOG2505	591	consensus Ankyrin repeat protein [General function	95.59
COG5022	1463	Myosin heavy chain [Cytoskeleton]	95.36
KOG2505	591	consensus Ankyrin repeat protein [General function	95.34
PF01833	85	TIG: IPT/TIG domain; InterPro: IPR002909 This fami	95.23
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.04
smart00015	26	IQ Short calmodulin-binding motif containing conse	94.9
cd00102	89	IPT Immunoglobulin-like fold, Plexins, Transcripti	94.23
cd01179	85	IPT_plexin_repeat2 Second repeat of the IPT domain	94.14
KOG2128	1401	consensus Ras GTPase-activating protein family - I	91.16
PF08549	669	SWI-SNF_Ssr4: Fungal domain of unknown function (D	90.78
cd01180	94	IPT_plexin_repeat1 First repeat of the IPT domain	89.83
cd00603	90	IPT_PCSR IPT domain of Plexins and Cell Surface Re	89.55
cd01181	99	IPT_plexin_repeat3 Third repeat of the IPT domain	88.1
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	82.04

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=100.00  E-value=1.5e-127  Score=1151.78  Aligned_cols=936  Identities=42%  Similarity=0.632  Sum_probs=668.7

Q ss_pred             CCCcccHHHHHHHHHHhcCChHHHHHHHhcccceeecccCCCCCCCCceEeeehhhhhhhhccCccceecCCCcchHhhh
Q 001436            9 LAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAH   88 (1078)
Q Consensus         9 ~~~~~d~~~~~~~~~~rw~~~~e~~~~l~~~~~~~~~~~~~~~p~~g~~~l~~r~~~~~~r~dg~~w~k~~~~~~~~e~h   88 (1078)
                      ....||+..++++|++|||+|+||+.||+||++|.|+.+||+||.|||+||||||+|||||||||+||||||||||||||
T Consensus        19 sl~~l~~~~ll~~~~~rWl~~~EI~~il~n~~~~~lt~~s~trp~sGS~flfnRk~lr~fRKDGh~WkKkkDGKtirEaH   98 (975)
T KOG0520|consen   19 SLQDLDIQTLLPEAKSRWLTPEEILAILINHEKFTLTVSSPTRPQSGSIFLFNRKVLRYFRKDGHNWKKKKDGKTIREAH   98 (975)
T ss_pred             hhhhhhhhhhhHHHHhccCChHHHHHHHhcccccccccCCCCCCCCCceeeeccHHHHHHhhcchhhhhcCCCCcChHHH
Confidence            34679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhccCCEeeEEEEeecccCCcccceeeeecccCCCcceEEEEeeeccCCCCCCCCCCCccccCCCCCCCCCcccCCCCC
Q 001436           89 EKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNR  168 (1078)
Q Consensus        89 ~~lk~~~~~~~~~~y~~~~~~~~f~rr~y~~~~~~~~~ivlvhy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (1078)
                      |||||||+|+||||||||+++|||||||||||++.++||||||||||++.+....+..+.-     .++.|..    .  
T Consensus        99 e~LKvg~~~~l~~~Y~Hg~~~ptF~RRcYwllq~~~~hIVLVHYl~v~~~~~~~~~~~~~~-----~s~~sd~----~--  167 (975)
T KOG0520|consen   99 EKLKVGGVEVLHCYYAHGEINPTFQRRCYWLLQQELEHIVLVHYLNVKGNEDAAKGAGEIF-----SSIISDK----A--  167 (975)
T ss_pred             HhhccCCccceeeeeecccccchHHHHHHHhhccccCceEEEEEeecccccccccCccccc-----ccccccc----c--
Confidence            9999999999999999999999999999999999999999999999998764322211111     0011100    0  


Q ss_pred             CCCCCCCCCCCCCCCC-cccccccccCCCCcccccccccccccccc-cccCCCCCCcccccCCCCccc-ccCCCCccCCC
Q 001436          169 TKAPSGITDSTSPTST-LTLSCEDADSGYDAEDSHQASSRAHLYYE-LPQMGNGPRMEKMDSGLSYSY-FLSPSSVRSSI  245 (1078)
Q Consensus       169 ~~~~~~~~~~~~~~~~-~~~~~e~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  245 (1078)
                       -...+..+..++.-- ..+..+|++++    .+++.+..+-...+ ..++.    +..++..+.... ..+....  ++
T Consensus       168 -~S~~~~~~q~~~~~~~~~s~~~~v~~i----~s~~~~~~~g~~~~~s~~h~----i~~~~~~s~~~~~~~p~s~~--s~  236 (975)
T KOG0520|consen  168 -WSLNQLAGQLSPIFHNHSSVNEDVAEI----NSNQTGNALGSVFGNSRNHR----IRLHEVNSLDPLYKLPVSDD--SL  236 (975)
T ss_pred             -ccHHHhhcccCcchhcccchHHHHHHH----hhhccccccccccCcchhhh----hcccccCCccccccccccCC--cc
Confidence             011122222222111 33567888887    43332222111111 00000    000111001101 1100000  00


Q ss_pred             CCCcccCCCCCCCCCchhhhHhhhcccccchHHHhhccCCCCCCCCCCcccccccccccccccccccccccccccCCCCC
Q 001436          246 PGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNVQKENIFDGELLSREASEENSGSSLP  325 (1078)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (1078)
                      +. ..+.+...+. ....+  .++..+...|.+.+++++.........     +..   ..+.++               
T Consensus       237 ~~-~~~~~~~~~~-~~~~~--~~rs~~~s~~te~l~n~~~~~~~~g~s-----~s~---~l~~i~---------------  289 (975)
T KOG0520|consen  237 NL-SAPKPIDLPK-GPTSV--KQRSSSPSYFTEILGNAPSGLVSQGNS-----LSS---SLQRIS---------------  289 (975)
T ss_pred             cc-ccCCCccccc-CCcch--hhcCCCCcchhhhcccCCCcccccccc-----ccc---chhhcc---------------
Confidence            10 0000000000 01111  112233446888887776211110000     000   000000               


Q ss_pred             cccccccc-----cccCCccchhhhcccccCCCcccccCCccccccccccccCCCCCCccccccccCccccccchhhccc
Q 001436          326 VQFNWQIP-----LADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQR  400 (1078)
Q Consensus       326 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (1078)
                         .||..     .+.|+.+|.....     +.+....                  +.+     ++.   .+++..  .+
T Consensus       290 ---~~~~~~~~~~~~p~~~nf~~~ss-----~~s~~~~------------------~~~-----g~g---~~~~~~--sa  333 (975)
T KOG0520|consen  290 ---SFTGLDNAAYEQPNSQNFEPNSS-----LNSHVTG------------------QSY-----GQG---LQARSP--SA  333 (975)
T ss_pred             ---cccccccccccCCcccccccccc-----CCCCccc------------------ccc-----Ccc---ccCCCc--cc
Confidence               11110     0001111110000     0000000                  000     000   000000  00


Q ss_pred             cccccccccCCCcccccCcccccccccccccccCCCCCCcccccchhhhhhhhhhccccccccC-CCcccccccCCccCC
Q 001436          401 DVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS-GIEWSTEECGNVVDD  479 (1078)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dsf~~w~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~~  479 (1078)
                      ++...|                   .+...+.--..+++++.|||.+||+ .|++..|+...++ +..|....+......
T Consensus       334 ~~~~~P-------------------~~~~~~~~~~~~~l~sgdsf~~~~~-t~~e~~d~~q~~s~~~~~~p~~~~~~~~~  393 (975)
T KOG0520|consen  334 TSESRP-------------------ITSAADAALSELGLKSGDSFSRWAS-TFGEISDLGQDPSGEAVWTPENDPMGPPG  393 (975)
T ss_pred             ccccCC-------------------cchhhccccccccccccccccchhh-hhcccccCCCCCccccccccCCCcCCCcc
Confidence            000000                   0110111111779999999999996 8988887774444 457866644333344


Q ss_pred             CCCCCCccccCceEEEeecCCCCCCCCCeeEEEeccccccccccccchhhhhcCCchHHHHHHHCCCCccCCCCCCCCCc
Q 001436          480 SSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRV  559 (1078)
Q Consensus       480 ~~~~~s~~~~qlfsI~dfsP~wa~~~ggtKVlI~G~f~~~~~~~~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~T  559 (1078)
                      +.++||+ ++|+|+|+||||+|+|++||+||+|+|.+    .+.+..+|.||||+.+||++||+.||+||+||+|.+|.|
T Consensus       394 s~~~~S~-p~qlf~I~DfSP~Wsy~~ggvKVlV~G~~----~~~~~~~ysc~Fg~~~VPAeliq~GVLrC~~P~h~~G~V  468 (975)
T KOG0520|consen  394 SFLSPSS-PEQLFTITDFSPEWSYLDGGVKVLVTGFP----QDETRSNYSCMFGEQRVPAELIQEGVLRCYAPPHEPGVV  468 (975)
T ss_pred             cccCCCC-CcceeeeeccCcccccCCCCcEEEEecCc----cccCCCceEEEeCCccccHHHhhcceeeeecCccCCCeE
Confidence            5677885 49999999999999999999999999962    334567899999999999999999999999999999999


Q ss_pred             hHHHHHh-CCCcccchhhhhhccCCCCCCcccCCCCCCccHHHHHHHHHHHHHhCC----CCCcCCccCcccHHHHHHHh
Q 001436          560 PFYITCS-NRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRS----SPQNHLSEGLCEKQKLISKI  634 (1078)
Q Consensus       560 PLhvA~~-ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl~~rlvkLLl~~g----~~~~~~~~~g~t~lhlAak~  634 (1078)
                      +|++||. ++.+|+++.+|.|+......+|..+.+. ....+.+..++.+++....    ......+........++.++
T Consensus       469 ~l~V~c~~~~~~~se~ref~~~~~~~~~~d~~s~~d-~~~~~sl~~rl~~~~~r~~~~~~s~~~~~n~~~~~~~~l~skv  547 (975)
T KOG0520|consen  469 NLQVTCRISGLACSEVREFAYLVQPSQQIDKLSWED-FLFQMSLLHRLETMLNRKQSILSSKPSTENTSDAESGNLASKV  547 (975)
T ss_pred             EEEEEecccceeeeeehheeecccCccccccccccc-chhhhHHHHHHHHHHHHhHhHhhccCCccccccccchhHHHHH
Confidence            9999998 8999999999999999888888887444 5677777888888887332    22233333333333388888


Q ss_pred             ccchhHHHHH-HHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHhC-CCCCCccCCCCCcHHHHHHHcCCHHHHH
Q 001436          635 IQLKEEEESY-QMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCED-GKGPCILDDEGQGVLHLAASLGYDWAIK  712 (1078)
Q Consensus       635 ~~l~~~~~~~-LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~-Gad~n~~d~~G~TpLH~Aa~~G~~~iv~  712 (1078)
                      ..+ .+.|.+ ++ .....+.....+.++.++.+.+++.++.|+++.+++- |...+..|.+|...+|++|..|+.+.+.
T Consensus       548 ~~l-~~~~~~r~~-~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~l  625 (975)
T KOG0520|consen  548 VHL-LNEWAYRLL-KSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFL  625 (975)
T ss_pred             HHH-HHHHHHHHH-hhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEE
Confidence            887 677777 76 4455555666677889999999999999999999996 8888889999999999999999999998


Q ss_pred             HHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCC
Q 001436          713 PTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT  792 (1078)
Q Consensus       713 ~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~  792 (1078)
                      +.+..|..++++|..||||||||+.+|++.++..|++.|++.++++||++.++.|.|+..+|..+|+.++..+|-+..+.
T Consensus       626 l~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L~  705 (975)
T KOG0520|consen  626 PISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKALS  705 (975)
T ss_pred             EEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHHH
Confidence            88889999999999999999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             cccccCccCCC-C-CCChhHHhHHHHHHHHHHccCCCCCCCCCcchhcccchHHHHHHHHHHhHHHHHHHhhhhHHHHHH
Q 001436          793 SLLLSLKMNDS-A-DDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQL  870 (1078)
Q Consensus       793 ~~~adln~kd~-~-g~tal~~a~~~~v~~Lle~ga~~~~~~~~e~~lslkdsltAl~~AaqaAarIq~afR~~s~~rKq~  870 (1078)
                      .++.++...+. . +.++..    ...+...+....+     .++..+++|.++|+++|+++|+|||++||.++|+++++
T Consensus       706 ~~~~~~~~~~~~~s~~~~~~----~~~~t~~e~s~~~-----~~~~~sl~Dtl~avrdAa~aa~r~q~vfr~~~~~~~~a  776 (975)
T KOG0520|consen  706 AHLSNLELADPNLSADSEED----KAEKTSSEGSPNP-----DEDSDSLKDTLAAVRDAAQAAARIQAVFRAQSFQKKQA  776 (975)
T ss_pred             HHHhhccccccccCCCchhh----hhhhccCCCCCCC-----CccccccccccccccchHHHHHhhhhhhhhhhhhhhhH
Confidence            88877776663 2 122222    2222221211111     13344599999999999999999999999999999999


Q ss_pred             HHhhh--hhcCchHHHhHHHHhhccCcccchhhhhhhHHHhhhhhhhHHHHHHhhccccchhhHHHHHhHHHHHHHHHHH
Q 001436          871 TEFNN--ELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPI  948 (1078)
Q Consensus       871 ~e~~d--e~g~~~e~alsllA~K~~k~~~R~~~l~~AAv~IQk~~Rg~~~Rk~fl~~R~aai~IQa~~RG~~aRk~y~~~  948 (1078)
                      .+..+  ...+..+.+.++.+.+.-+ ....+....++..||++||+|+.|+.|+.+|+.+++||+++||++.|+.|+++
T Consensus       777 ~~i~~~~~~~i~~~~~~~m~~~~a~~-~~~~r~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki  855 (975)
T KOG0520|consen  777 REIMDATKEQISEELAVSMKASSAFS-MCDDRSDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKI  855 (975)
T ss_pred             HHHHhhcchhhhhhhhhhhhcccchh-cCccccchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhhee
Confidence            99886  5556666666555443332 34455678899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhccccchhhhccCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Q 001436          949 IWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYR 1028 (1078)
Q Consensus       949 r~aa~~IQk~iR~~~~Rr~~lRg~r~~~~~~~~~~~~~~~~e~e~~~lk~~r~q~e~r~~~A~~riQs~~r~~~aR~~y~ 1028 (1078)
                      .|++.++.+.+.+|+++++++|||+.++..+.... ....+++.|||+|+++++.|+++.+|+++||+|+|++++|.|||
T Consensus       856 ~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~~~-a~t~~e~~yd~yKq~~~~~~~r~~~A~~~VQsm~rs~~a~qqyr  934 (975)
T KOG0520|consen  856 TWSVGVLEKLILRWRRKGKGFRGFKGRALFEEQET-AATVIEDCYDFYKQLRKQTEERLTRAVVRVQSMFRSPKAQQQYR  934 (975)
T ss_pred             chhhhHHHHHHHHHHHhhhhhcccccccchhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            99999999999999999999999998865441110 12345899999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccccccCCCCCCccccccCCccccccccccCCCCCcc
Q 001436         1029 RLLTVVEGSRETKESNMVPNGLEDIADGDLDLIDIDSLLDDDTFMS 1074 (1078)
Q Consensus      1029 r~l~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1074 (1078)
                      |++..+..+|+...+..+      .....+.++||+.|+.|+++|.
T Consensus       935 R~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~~~~~~  974 (975)
T KOG0520|consen  935 RLLLVYEQYQESYKEEAL------VGLLDDSLFDIEQLQADRKIMM  974 (975)
T ss_pred             HHHHHHHHHHhhhhhhcc------ccccccchhhhHhhhhhhhhhc
Confidence            999999999987732222      1234578999999998888763

>PF03859 CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein []

Probab=100.00  E-value=3.3e-60  Score=445.69  Aligned_cols=117  Identities=71%  Similarity=1.292  Sum_probs=114.5

Q ss_pred             HHHHHHhcCChHHHHHHHhcccceeecccCCCCCCCCceEeeehhhhhhhhccCccceecCCCcchHhhhhhhccCCEee
Q 001436           19 QMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDV   98 (1078)
Q Consensus        19 ~~~~~~rw~~~~e~~~~l~~~~~~~~~~~~~~~p~~g~~~l~~r~~~~~~r~dg~~w~k~~~~~~~~e~h~~lk~~~~~~   98 (1078)
                      ++| ++|||+|+||++||+||++|++..+||++|+|||+|||||+++||||||||+|||||||||||||||||||||+|+
T Consensus         2 ~~~-~~rWl~~~Ei~~IL~n~~~~~~~~~~~~rP~sGslfLf~Rk~~r~fRkDG~~WrKkkdgktvRE~HekLKv~~~e~   80 (118)
T PF03859_consen    2 LKE-KTRWLKPEEIAFILLNYEKFQIWLEPPNRPPSGSLFLFNRKVVRFFRKDGHNWRKKKDGKTVREDHEKLKVGGVEV   80 (118)
T ss_pred             chH-hcccCCHHHHHHHHHhHHhCCcccCCCCCCCCceEEEEEchHhhhhhcccceeEEcCCCCchhhhhhhhccCceee
Confidence            345 9999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeecccCCcccceeeeecccCCCcceEEEEeeecc
Q 001436           99 LHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQ  136 (1078)
Q Consensus        99 ~~~~y~~~~~~~~f~rr~y~~~~~~~~~ivlvhy~~~~  136 (1078)
                      ||||||||++|||||||||||||++|+||||||||||+
T Consensus        81 l~~~Yah~~~~~~F~RR~Ywll~~~~~~iVLVHY~~v~  118 (118)
T PF03859_consen   81 LNCYYAHSEDNPTFHRRCYWLLDPPYEHIVLVHYLDVK  118 (118)
T ss_pred             eEEEEEeeccCCCeeeEEEEccCCCCceEEEEEeeecC
Confidence            99999999999999999999999999999999999985

CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin-binding domain and ankyrins [].; GO: 0005516 calmodulin binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PHA02946 ankyin-like protein; Provisional

Probab=99.97  E-value=4.8e-30  Score=303.34  Aligned_cols=285  Identities=13%  Similarity=0.070  Sum_probs=235.7

Q ss_pred             cCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHH-------HH
Q 001436          532 FAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-------HL  604 (1078)
Q Consensus       532 fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl-------~~  604 (1078)
                      .++.++++.|++.|++  .+..+..|.||||+||..++  .++++  +++.+|+++|..|..|  .||||+       ..
T Consensus        49 ~~~~~iv~~Ll~~Gad--vn~~d~~G~TpLh~Aa~~g~--~eiv~--lLL~~GAdin~~d~~g--~TpLh~A~~~~~~~~  120 (446)
T PHA02946         49 GLDERFVEELLHRGYS--PNETDDDGNYPLHIASKINN--NRIVA--MLLTHGADPNACDKQH--KTPLYYLSGTDDEVI  120 (446)
T ss_pred             CCCHHHHHHHHHCcCC--CCccCCCCCCHHHHHHHcCC--HHHHH--HHHHCcCCCCCCCCCC--CCHHHHHHHcCCchH
Confidence            4466899999999998  67788999999999999998  77776  7778899999999988  899997       25


Q ss_pred             HHHHHHHhCCCCCc-CCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHc-CHHHHHHHHH
Q 001436          605 RLERILSMRSSPQN-HLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEK-LYSWLLRKVC  682 (1078)
Q Consensus       605 rlvkLLl~~g~~~~-~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~-~~~~lvk~Ll  682 (1078)
                      +++++|+..|++.+ ..+..|.+++| ++..++  .++++.|++.+++.+..+..+  .+++|.++... ....++++|+
T Consensus       121 e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~--~~vv~~Ll~~gad~~~~d~~G--~t~Lh~A~~~~~~~~~~v~~Ll  195 (446)
T PHA02946        121 ERINLLVQYGAKINNSVDEEGCGPLL-ACTDPS--ERVFKKIMSIGFEARIVDKFG--KNHIHRHLMSDNPKASTISWMM  195 (446)
T ss_pred             HHHHHHHHcCCCcccccCCCCCcHHH-HHHCCC--hHHHHHHHhccccccccCCCC--CCHHHHHHHhcCCCHHHHHHHH
Confidence            78999999996655 46888999997 455566  588999999999888877654  58888776544 4467899999


Q ss_pred             hCCCCCCccCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCccccCCCCchHHHHHHHcCC-HHHHHHHHHcCCCCCCCC-
Q 001436          683 EDGKGPCILDDEGQGVLHLAASLG--YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGR-EKTVAVLLSLGAAPGLLT-  758 (1078)
Q Consensus       683 e~Gad~n~~d~~G~TpLH~Aa~~G--~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~-~eiV~~LL~~GAdvn~~~-  758 (1078)
                      +.|++++.+|..|.||||+|+..|  +.+++++|+. |+++|.+|..|.||||+|+..++ .+++++|+++|++++..+ 
T Consensus       196 ~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~  274 (446)
T PHA02946        196 KLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTV  274 (446)
T ss_pred             HcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHH
Confidence            999999999999999999999986  7889999985 99999999999999999999988 589999999997653211 


Q ss_pred             ------C-------CCCC-CCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH----HHHHHHH
Q 001436          759 ------D-------PSPE-FPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTV  820 (1078)
Q Consensus       759 ------d-------~~~~-D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~----~~~v~~L  820 (1078)
                            +       ++.+ +..|.||||+|+.+|+.+++++|+++|.            .|.||+++|.    .+.++.|
T Consensus       275 ~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~~------------~~~t~L~~A~~~~~~~~v~~L  342 (446)
T PHA02946        275 NICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDNDI------------ICEDAMYYAVLSEYETMVDYL  342 (446)
T ss_pred             HHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCCC------------ccccHHHHHHHhCHHHHHHHH
Confidence                  0       0111 2357899999999999999999999874            2689999987    4678899


Q ss_pred             HHccCCCCCCCCCcchhcccchHHHHHHHHH
Q 001436          821 SEKTATPANDNDESDVLSLKDSLTAICNATQ  851 (1078)
Q Consensus       821 le~ga~~~~~~~~e~~lslkdsltAl~~Aaq  851 (1078)
                      +..|++++..         ..+.|+++.|+.
T Consensus       343 l~~ga~~n~~---------~~G~t~l~~a~~  364 (446)
T PHA02946        343 LFNHFSVDSV---------VNGHTCMSECVR  364 (446)
T ss_pred             HHCCCCCCCc---------cccccHHHHHHH
Confidence            9999986641         368888888876

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.97  E-value=1.5e-29  Score=314.33  Aligned_cols=296  Identities=14%  Similarity=0.046  Sum_probs=240.6

Q ss_pred             chhhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHH---
Q 001436          526 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL---  602 (1078)
Q Consensus       526 ~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl---  602 (1078)
                      ...++..|+.++++.|++.|++  .+..+..|.||||+||..|+  .++++  +++..|++++..+..|  .+++|+   
T Consensus       149 l~~~i~~~~~~i~k~Ll~~Gad--vn~~d~~G~TpLh~Aa~~G~--~~iv~--~LL~~Gad~n~~~~~g--~t~L~~A~~  220 (682)
T PHA02876        149 IKERIQQDELLIAEMLLEGGAD--VNAKDIYCITPIHYAAERGN--AKMVN--LLLSYGADVNIIALDD--LSVLECAVD  220 (682)
T ss_pred             HHHHHHCCcHHHHHHHHhCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCcCccCCCC--CCHHHHHHH
Confidence            4567788999999999999988  66778889999999999888  67666  7778888888888777  788876   


Q ss_pred             --HHHHHH-----------------------------HHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCC
Q 001436          603 --HLRLER-----------------------------ILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANP  651 (1078)
Q Consensus       603 --~~rlvk-----------------------------LLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad  651 (1078)
                        +.++++                             +|+..|...+..+..|.||||+|+..+.+ ...+..|++.+++
T Consensus       221 ~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~-~~iv~lLl~~gad  299 (682)
T PHA02876        221 SKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSL-SRLVPKLLERGAD  299 (682)
T ss_pred             cCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCH-HHHHHHHHHCCCC
Confidence              334444                             44555555566677889999999998886 6788888888888


Q ss_pred             CCCcCcccccchHHHHHHHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC-CHHHHHHHHhCCCCccccCCCCch
Q 001436          652 EKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLG-YDWAIKPTVTAGVSINFRDLSGWT  730 (1078)
Q Consensus       652 ~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G-~~~iv~~LL~~Gadin~~D~~G~T  730 (1078)
                      ++..+..+  .+++|.++..+....+++.|+..|++++..|..|.||||+|+..+ +.+++.+|++.|+++|.+|..|+|
T Consensus       300 in~~d~~g--~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~T  377 (682)
T PHA02876        300 VNAKNIKG--ETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKT  377 (682)
T ss_pred             CCCcCCCC--CCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCC
Confidence            88776544  588888887775677889999999999999999999999998864 688889999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCc-HHHHHHHHHcCCCcccccCccCCCCCCChh
Q 001436          731 ALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGH-KGISGFLAESSLTSLLLSLKMNDSADDGAL  809 (1078)
Q Consensus       731 pLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~-~~iv~~LLe~ga~~~~adln~kd~~g~tal  809 (1078)
                      |||+|+..|+.+++++|+++|++++..+      ..|.||||+|+..++ ..++++|++.|++     +|.+|..|.||+
T Consensus       378 pLh~Aa~~~~~~iv~~Ll~~gad~~~~~------~~g~T~Lh~A~~~~~~~~~vk~Ll~~gad-----in~~d~~G~TpL  446 (682)
T PHA02876        378 PIHYAAVRNNVVIINTLLDYGADIEALS------QKIGTALHFALCGTNPYMSVKTLIDRGAN-----VNSKNKDLSTPL  446 (682)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCccccC------CCCCchHHHHHHcCCHHHHHHHHHhCCCC-----CCcCCCCCChHH
Confidence            9999999999999999999999988744      688999999987665 5678999998854     888999999999


Q ss_pred             HHhH-----HHHHHHHHHccCCCCCCCCCcchhcccchHHHHHHHHH
Q 001436          810 EDSI-----AKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQ  851 (1078)
Q Consensus       810 ~~a~-----~~~v~~Lle~ga~~~~~~~~e~~lslkdsltAl~~Aaq  851 (1078)
                      |+|+     ..+++.|++.|++++..+        ..+.+++..|+.
T Consensus       447 h~Aa~~~~~~~iv~lLl~~Gad~n~~d--------~~g~tpl~~a~~  485 (682)
T PHA02876        447 HYACKKNCKLDVIEMLLDNGADVNAIN--------IQNQYPLLIALE  485 (682)
T ss_pred             HHHHHhCCcHHHHHHHHHCCCCCCCCC--------CCCCCHHHHHHH
Confidence            9876     367889999999877644        566777777654

>PHA03095 ankyrin-like protein; Provisional

Probab=99.97  E-value=2e-29  Score=298.97  Aligned_cols=281  Identities=16%  Similarity=0.120  Sum_probs=242.3

Q ss_pred             hhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCC-CcccchhhhhhccCCCCCCcccCCCCCCccHHHH----
Q 001436          528 WSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNR-LACSEVREFDYIVGSVKDADISDIYGSSTSESFL----  602 (1078)
Q Consensus       528 ~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng-~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl----  602 (1078)
                      .++..+++++++.|++.|++  .+..+..|.||||+|+..+ ..+.+++.  +++..|+++|..+..|  .||||+    
T Consensus        20 ~~~~~~~~~~v~~Ll~~ga~--vn~~~~~g~t~Lh~a~~~~~~~~~~iv~--~Ll~~Gadin~~~~~g--~TpLh~A~~~   93 (471)
T PHA03095         20 LNASNVTVEEVRRLLAAGAD--VNFRGEYGKTPLHLYLHYSSEKVKDIVR--LLLEAGADVNAPERCG--FTPLHLYLYN   93 (471)
T ss_pred             HcCCCCCHHHHHHHHHcCCC--cccCCCCCCCHHHHHHHhcCCChHHHHH--HHHHCCCCCCCCCCCC--CCHHHHHHHc
Confidence            56778999999999999998  6677888999999999887 32256655  7788999999999977  999998    


Q ss_pred             --HHHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcC-HHHHHH
Q 001436          603 --HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKL-YSWLLR  679 (1078)
Q Consensus       603 --~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~-~~~lvk  679 (1078)
                        ..+++++|+..|++.+..+..|.||+|+|+.....-.++++.|++.+++++..+..+  .+++|.++.... ...+++
T Consensus        94 ~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g--~tpL~~a~~~~~~~~~iv~  171 (471)
T PHA03095         94 ATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYG--MTPLAVLLKSRNANVELLR  171 (471)
T ss_pred             CCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCC--CCHHHHHHHcCCCCHHHHH
Confidence              368999999999888889999999999999543211478999999999988877654  688887776553 567899


Q ss_pred             HHHhCCCCCCccCCCCCcHHHHHHHc--CCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCH--HHHHHHHHcCCCCC
Q 001436          680 KVCEDGKGPCILDDEGQGVLHLAASL--GYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE--KTVAVLLSLGAAPG  755 (1078)
Q Consensus       680 ~Lle~Gad~n~~d~~G~TpLH~Aa~~--G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~--eiV~~LL~~GAdvn  755 (1078)
                      +|++.|++++..|..|.||||+|+..  +...+++.|+++|++++.+|..|+||||+||..|+.  .++..|+..|+++|
T Consensus       172 ~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din  251 (471)
T PHA03095        172 LLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISIN  251 (471)
T ss_pred             HHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCC
Confidence            99999999999999999999999875  788999999999999999999999999999999975  58889999999998


Q ss_pred             CCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH----HHHHHHHHHccCCC
Q 001436          756 LLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATP  827 (1078)
Q Consensus       756 ~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~----~~~v~~Lle~ga~~  827 (1078)
                      .      +|..|.||||+|+..|+.+++++|++.|+     +++++|..|.||++.|.    ...++.|++.++++
T Consensus       252 ~------~d~~g~TpLh~A~~~~~~~~v~~LL~~ga-----d~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~  316 (471)
T PHA03095        252 A------RNRYGQTPLHYAAVFNNPRACRRLIALGA-----DINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSA  316 (471)
T ss_pred             C------cCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCH
Confidence            8      55799999999999999999999999995     48889999999999987    46778888877753

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.97  E-value=3.9e-29  Score=310.68  Aligned_cols=285  Identities=13%  Similarity=-0.015  Sum_probs=247.8

Q ss_pred             ccchhhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhh--------------------------
Q 001436          524 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREF--------------------------  577 (1078)
Q Consensus       524 ~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~f--------------------------  577 (1078)
                      +++++||..|+.++++.|++.|++  ....+..|.||||+|+..++  .+++++                          
T Consensus       180 TpLh~Aa~~G~~~iv~~LL~~Gad--~n~~~~~g~t~L~~A~~~~~--~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~  255 (682)
T PHA02876        180 TPIHYAAERGNAKMVNLLLSYGAD--VNIIALDDLSVLECAVDSKN--IDTIKAIIDNRSNINKNDLSLLKAIRNEDLET  255 (682)
T ss_pred             CHHHHHHHCCCHHHHHHHHHCCCC--cCccCCCCCCHHHHHHHcCC--HHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHH
Confidence            446799999999999999999998  66678889999999998876  444332                          


Q ss_pred             -hhccCCCCCCcccCCCCCCccHHHHHH------HHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcC
Q 001436          578 -DYIVGSVKDADISDIYGSSTSESFLHL------RLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEAN  650 (1078)
Q Consensus       578 -eyll~~gadvn~~d~~G~~~t~Lhl~~------rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~a  650 (1078)
                       .++...|++++..|..|  .||||+..      .++++|+..|++.+..+..|.||+|+|+..+.. .+.++.|+..++
T Consensus       256 ~~~Ll~~g~~vn~~d~~g--~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~-~~~v~~Ll~~ga  332 (682)
T PHA02876        256 SLLLYDAGFSVNSIDDCK--NTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYD-TENIRTLIMLGA  332 (682)
T ss_pred             HHHHHHCCCCCCCCCCCC--CCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCC-HHHHHHHHHcCC
Confidence             34556677888888777  99999833      588999999988888899999999999999853 588899998999


Q ss_pred             CCCCcCcccccchHHHHHHHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCch
Q 001436          651 PEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWT  730 (1078)
Q Consensus       651 d~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~T  730 (1078)
                      +.+..+..+  .+++|.++..+....++++|++.|+++|.+|..|.||||+|+..|+.+++++|+++|++++..+..|.|
T Consensus       333 din~~d~~g--~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T  410 (682)
T PHA02876        333 DVNAADRLY--ITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGT  410 (682)
T ss_pred             CCCCcccCC--CcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCc
Confidence            988776544  589999988887888999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcC-cHHHHHHHHHcCCCcccccCccCCCCCCCh
Q 001436          731 ALHWAAYCGR-EKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNG-HKGISGFLAESSLTSLLLSLKMNDSADDGA  808 (1078)
Q Consensus       731 pLH~Aa~~G~-~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G-~~~iv~~LLe~ga~~~~adln~kd~~g~ta  808 (1078)
                      |||+|+..++ ..++++|++.|+++|.      +|..|.||||+|+..| +.+++++|++.|++     +|.+|..|.||
T Consensus       411 ~Lh~A~~~~~~~~~vk~Ll~~gadin~------~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad-----~n~~d~~g~tp  479 (682)
T PHA02876        411 ALHFALCGTNPYMSVKTLIDRGANVNS------KNKDLSTPLHYACKKNCKLDVIEMLLDNGAD-----VNAINIQNQYP  479 (682)
T ss_pred             hHHHHHHcCCHHHHHHHHHhCCCCCCc------CCCCCChHHHHHHHhCCcHHHHHHHHHCCCC-----CCCCCCCCCCH
Confidence            9999998766 5679999999999988      5579999999999977 68999999999964     89999999999


Q ss_pred             hHHhHH--HHHHHHHHccCCCC
Q 001436          809 LEDSIA--KAVQTVSEKTATPA  828 (1078)
Q Consensus       809 l~~a~~--~~v~~Lle~ga~~~  828 (1078)
                      ++.+..  ..++.|+..+++..
T Consensus       480 l~~a~~~~~~v~~Ll~~~a~~~  501 (682)
T PHA02876        480 LLIALEYHGIVNILLHYGAELR  501 (682)
T ss_pred             HHHHHHhCCHHHHHHHCCCCCC
Confidence            998764  57888899988754

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.97  E-value=2.8e-29  Score=307.28  Aligned_cols=182  Identities=13%  Similarity=0.018  Sum_probs=102.8

Q ss_pred             HHHHHHHhhcCCCCCcCcccccchHHHHHHHH-cCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHH--------------
Q 001436          640 EEESYQMVEANPEKNLSQHVEKYQILQKIMKE-KLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS--------------  704 (1078)
Q Consensus       640 ~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~-~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~--------------  704 (1078)
                      ++++.|++.+++++..+..+  .++||.++.. .+...++++|++.|+++|.+|..|+||||+|+.              
T Consensus       298 eiVklLLe~GAdIN~kD~~G--~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~  375 (764)
T PHA02716        298 SVVYSFLQPGVKLHYKDSAG--RTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDN  375 (764)
T ss_pred             HHHHHHHhCCCceeccCCCC--CCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccc
Confidence            55666666666655544332  4566654432 334456666666666666666666666666543              


Q ss_pred             cCCHHHHHHHHhCCCCccccCCCCchHHHHH----HHcCCHHHHHHHHHcCCCCCCC-----------------------
Q 001436          705 LGYDWAIKPTVTAGVSINFRDLSGWTALHWA----AYCGREKTVAVLLSLGAAPGLL-----------------------  757 (1078)
Q Consensus       705 ~G~~~iv~~LL~~Gadin~~D~~G~TpLH~A----a~~G~~eiV~~LL~~GAdvn~~-----------------------  757 (1078)
                      .|+.+++++|+++|++++.+|..|+||||.|    ...++.+++++|++.|+.....                       
T Consensus       376 ~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a  455 (764)
T PHA02716        376 DIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIA  455 (764)
T ss_pred             cChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHH
Confidence            2456666666666666666666666666631    1235566666666654321000                       


Q ss_pred             --------------------------------CCCCCCCCCCCCHHHHHHhcCcHH-----HHHHHHHcCCCcccccCcc
Q 001436          758 --------------------------------TDPSPEFPLSRTPSDLASSNGHKG-----ISGFLAESSLTSLLLSLKM  800 (1078)
Q Consensus       758 --------------------------------~d~~~~D~~G~TPLhlAa~~G~~~-----iv~~LLe~ga~~~~adln~  800 (1078)
                                                      .+++..|..|+||||+|+..|+.+     ++++|++.|++     +|.
T Consensus       456 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GAD-----IN~  530 (764)
T PHA02716        456 KYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYN-----INI  530 (764)
T ss_pred             hcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCC-----Ccc
Confidence                                            012334556666666666666543     33666666643     666


Q ss_pred             CCCCCCChhHHhHH---------HHHHHHHHccCCCC
Q 001436          801 NDSADDGALEDSIA---------KAVQTVSEKTATPA  828 (1078)
Q Consensus       801 kd~~g~tal~~a~~---------~~v~~Lle~ga~~~  828 (1078)
                      +|..|.||+|+|..         ++++.|++.++.++
T Consensus       531 ~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~  567 (764)
T PHA02716        531 PTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVD  567 (764)
T ss_pred             cCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcc
Confidence            66666666666653         55666666666533

>PHA03095 ankyrin-like protein; Provisional

Probab=99.97  E-value=6.7e-29  Score=294.54  Aligned_cols=253  Identities=19%  Similarity=0.173  Sum_probs=222.7

Q ss_pred             cchhhhhcC---CchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHH
Q 001436          525 KCKWSCMFA---EVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESF  601 (1078)
Q Consensus       525 ~~~~Ac~fG---~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lh  601 (1078)
                      ++++|+..|   +.+++..|++.|++  .+..+..|.||||+|+..+. ..+++.  ++...|+++|..+..|  .||||
T Consensus        50 ~Lh~a~~~~~~~~~~iv~~Ll~~Gad--in~~~~~g~TpLh~A~~~~~-~~~iv~--lLl~~ga~in~~~~~g--~tpLh  122 (471)
T PHA03095         50 PLHLYLHYSSEKVKDIVRLLLEAGAD--VNAPERCGFTPLHLYLYNAT-TLDVIK--LLIKAGADVNAKDKVG--RTPLH  122 (471)
T ss_pred             HHHHHHHhcCCChHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCC-cHHHHH--HHHHcCCCCCCCCCCC--CCHHH
Confidence            356999998   99999999999999  77778899999999999883 155555  7788899999999888  89999


Q ss_pred             HH-------HHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHH-cC
Q 001436          602 LH-------LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKE-KL  673 (1078)
Q Consensus       602 l~-------~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~-~~  673 (1078)
                      +.       .+++++|+..|++.+..+..|.||+|++........+.++.|++.+++.+..+.  ...+++|.++.. ..
T Consensus       123 ~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~--~g~t~Lh~~~~~~~~  200 (471)
T PHA03095        123 VYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDD--RFRSLLHHHLQSFKP  200 (471)
T ss_pred             HHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCC--CCCCHHHHHHHHCCC
Confidence            84       478999999998888889999999999888764214788999989988887743  446888887764 45


Q ss_pred             HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCH--HHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcC
Q 001436          674 YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYD--WAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG  751 (1078)
Q Consensus       674 ~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~--~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~G  751 (1078)
                      ...+++.|++.|++++.+|..|.||||+||..|+.  .++..|+..|+++|.+|..|+||||+|+..|+.++|++||+.|
T Consensus       201 ~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~g  280 (471)
T PHA03095        201 RARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALG  280 (471)
T ss_pred             cHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence            67789999999999999999999999999999975  5788999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCC
Q 001436          752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT  792 (1078)
Q Consensus       752 Advn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~  792 (1078)
                      |+++.      +|..|.||||+|+..|+.+++++|++.+++
T Consensus       281 ad~n~------~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~  315 (471)
T PHA03095        281 ADINA------VSSDGNTPLSLMVRNNNGRAVRAALAKNPS  315 (471)
T ss_pred             CCCcc------cCCCCCCHHHHHHHhCCHHHHHHHHHhCCC
Confidence            99988      457999999999999999999999999865

>PHA02946 ankyin-like protein; Provisional

Probab=99.96  E-value=9.9e-29  Score=292.13  Aligned_cols=275  Identities=10%  Similarity=-0.006  Sum_probs=226.4

Q ss_pred             cccchhhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcc-cCCCCCCccHHH
Q 001436          523 VAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADI-SDIYGSSTSESF  601 (1078)
Q Consensus       523 ~~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~-~d~~G~~~t~Lh  601 (1078)
                      .+++++||..|+.++++.|++.|++  .+..+..|+||||+|+.++....++++  +++..|+++|. .|..|  .||++
T Consensus        73 ~TpLh~Aa~~g~~eiv~lLL~~GAd--in~~d~~g~TpLh~A~~~~~~~~e~v~--lLl~~Gadin~~~d~~g--~tpL~  146 (446)
T PHA02946         73 NYPLHIASKINNNRIVAMLLTHGAD--PNACDKQHKTPLYYLSGTDDEVIERIN--LLVQYGAKINNSVDEEG--CGPLL  146 (446)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCcCC--CCCCCCCCCCHHHHHHHcCCchHHHHH--HHHHcCCCcccccCCCC--CcHHH
Confidence            3557799999999999999999998  677899999999999877653344444  77889999996 46666  89987


Q ss_pred             H----HHHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHc-CHHH
Q 001436          602 L----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEK-LYSW  676 (1078)
Q Consensus       602 l----~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~-~~~~  676 (1078)
                      .    +.+++++|+..|++.+..+..|.+++|+|+.....-.+.++.|++.+++++..+..+  .|++|.++..+ ....
T Consensus       147 aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G--~TpLH~Aa~~~~~~~~  224 (446)
T PHA02946        147 ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDG--NTPLHIVCSKTVKNVD  224 (446)
T ss_pred             HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCC--CCHHHHHHHcCCCcHH
Confidence            6    568999999999888899999999999988766531367899999999998877654  58999888764 3566


Q ss_pred             HHHHHHhCCCCCCccCCCCCcHHHHHHHcCC-HHHHHHHHhCCCCcc--------------------ccC-CCCchHHHH
Q 001436          677 LLRKVCEDGKGPCILDDEGQGVLHLAASLGY-DWAIKPTVTAGVSIN--------------------FRD-LSGWTALHW  734 (1078)
Q Consensus       677 lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~-~~iv~~LL~~Gadin--------------------~~D-~~G~TpLH~  734 (1078)
                      ++++|+. |+++|.+|..|.||||+|+..++ .+++++|+.+|++++                    ..+ ..|.||||+
T Consensus       225 iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~  303 (446)
T PHA02946        225 IINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKM  303 (446)
T ss_pred             HHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHH
Confidence            7888885 89999999999999999999988 589999999987542                    222 357899999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHH
Q 001436          735 AAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA  814 (1078)
Q Consensus       735 Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~  814 (1078)
                      |+..|+.++|++||++|+             .|.||||+|+..|+.+++++|+.+|++     +|.++ .|.||+++|..
T Consensus       304 Aa~~g~~eivk~Ll~~~~-------------~~~t~L~~A~~~~~~~~v~~Ll~~ga~-----~n~~~-~G~t~l~~a~~  364 (446)
T PHA02946        304 AVEVGSIRCVKYLLDNDI-------------ICEDAMYYAVLSEYETMVDYLLFNHFS-----VDSVV-NGHTCMSECVR  364 (446)
T ss_pred             HHHcCCHHHHHHHHHCCC-------------ccccHHHHHHHhCHHHHHHHHHHCCCC-----CCCcc-ccccHHHHHHH
Confidence            999999999999999864             478999999999999999999999965     77764 59999999985


Q ss_pred             HHHHHHHHccC
Q 001436          815 KAVQTVSEKTA  825 (1078)
Q Consensus       815 ~~v~~Lle~ga  825 (1078)
                      .....+++.+.
T Consensus       365 ~~~~~~~~~ll  375 (446)
T PHA02946        365 LNNPVILSKLM  375 (446)
T ss_pred             cCCHHHHHHHH
Confidence            44444444433

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.96  E-value=1.6e-28  Score=292.20  Aligned_cols=274  Identities=16%  Similarity=0.114  Sum_probs=234.8

Q ss_pred             cCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHH---------
Q 001436          532 FAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL---------  602 (1078)
Q Consensus       532 fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl---------  602 (1078)
                      +....++..++..+-.  ..+.+..|.||||+|+..+.  .++++  +++..|++++..+..+  .+++|+         
T Consensus        12 ~~~~~~~~~~~~~~~~--~~~~~~~~~t~L~~A~~~~~--~~ivk--~Ll~~g~~~~~~~~~~--~t~L~~~~~~~a~~~   83 (480)
T PHA03100         12 IIKVKNIKYIIMEDDL--NDYSYKKPVLPLYLAKEARN--IDVVK--ILLDNGADINSSTKNN--STPLHYLSNIKYNLT   83 (480)
T ss_pred             HHHHHHHHHHHhcCcc--chhhhcccchhhhhhhccCC--HHHHH--HHHHcCCCCCCccccC--cCHHHHHHHHHHHhh
Confidence            3445677778877755  55667889999999999888  66666  7778889988887776  788877         


Q ss_pred             -HHHHHHHHHhCCCCCcCCccCcccHHHHHH--HhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcC-HHHHH
Q 001436          603 -HLRLERILSMRSSPQNHLSEGLCEKQKLIS--KIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKL-YSWLL  678 (1078)
Q Consensus       603 -~~rlvkLLl~~g~~~~~~~~~g~t~lhlAa--k~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~-~~~lv  678 (1078)
                       +.+++++|+..|+..+..+..|.+|+|+|+  ..++  .+.++.|++.+++.+..+..+  .+++|.++..+. ...++
T Consensus        84 ~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~--~~iv~~Ll~~g~~~~~~~~~g--~t~L~~A~~~~~~~~~iv  159 (480)
T PHA03100         84 DVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNS--YSIVEYLLDNGANVNIKNSDG--ENLLHLYLESNKIDLKIL  159 (480)
T ss_pred             chHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcccCh--HHHHHHHHHcCCCCCccCCCC--CcHHHHHHHcCCChHHHH
Confidence             568899999999777888889999999999  8888  589999998898888776544  577877776552 67789


Q ss_pred             HHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCC------chHHHHHHHcCC--HHHHHHHHHc
Q 001436          679 RKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSG------WTALHWAAYCGR--EKTVAVLLSL  750 (1078)
Q Consensus       679 k~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G------~TpLH~Aa~~G~--~eiV~~LL~~  750 (1078)
                      ++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|      .||||+|+..|+  .+++++|++.
T Consensus       160 ~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~  239 (480)
T PHA03100        160 KLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSY  239 (480)
T ss_pred             HHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHc
Confidence            99999999999999999999999999999999999999999999999999      999999999999  9999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH----HHHHHHHHHccCC
Q 001436          751 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTAT  826 (1078)
Q Consensus       751 GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~----~~~v~~Lle~ga~  826 (1078)
                      |++++.      +|..|.||||+|+..|+.+++++|++.|+     +++.+|..|.||++.|.    .+.++.|++.|++
T Consensus       240 g~din~------~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga-----d~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~  308 (480)
T PHA03100        240 GVPINI------KDVYGFTPLHYAVYNNNPEFVKYLLDLGA-----NPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPS  308 (480)
T ss_pred             CCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCC
Confidence            999987      55799999999999999999999999995     48889999999999876    5788899999986


Q ss_pred             CC
Q 001436          827 PA  828 (1078)
Q Consensus       827 ~~  828 (1078)
                      ++
T Consensus       309 i~  310 (480)
T PHA03100        309 IK  310 (480)
T ss_pred             HH
Confidence            54

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.96  E-value=8.8e-28  Score=283.23  Aligned_cols=283  Identities=15%  Similarity=0.092  Sum_probs=184.2

Q ss_pred             chhhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHH---
Q 001436          526 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL---  602 (1078)
Q Consensus       526 ~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl---  602 (1078)
                      ...||..|++++++.|++.+.. .....+..|.||||.|+..|+  .++++  +++..|+++|..+..|  .+|++.   
T Consensus         5 l~~ai~~gd~~~v~~ll~~~~~-~~n~~~~~~~tpL~~A~~~g~--~~iv~--~Ll~~Ga~~n~~~~~~--~t~L~~A~~   77 (434)
T PHA02874          5 LRMCIYSGDIEAIEKIIKNKGN-CINISVDETTTPLIDAIRSGD--AKIVE--LFIKHGADINHINTKI--PHPLLTAIK   77 (434)
T ss_pred             HHHHHhcCCHHHHHHHHHcCCC-CCCCcCCCCCCHHHHHHHcCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHHHH
Confidence            3468888898888888875433 244556778889999888888  67666  6677888888877776  788877   


Q ss_pred             --HHHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHH
Q 001436          603 --HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRK  680 (1078)
Q Consensus       603 --~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~  680 (1078)
                        +.+++++|+..|......          ......  .+.+..|++.+++.+..+..+  .+++|.++..+ ...++++
T Consensus        78 ~~~~~iv~~Ll~~g~~~~~~----------~~~~~~--~~~i~~ll~~g~d~n~~~~~g--~T~Lh~A~~~~-~~~~v~~  142 (434)
T PHA02874         78 IGAHDIIKLLIDNGVDTSIL----------PIPCIE--KDMIKTILDCGIDVNIKDAEL--KTFLHYAIKKG-DLESIKM  142 (434)
T ss_pred             cCCHHHHHHHHHCCCCCCcc----------hhccCC--HHHHHHHHHCcCCCCCCCCCC--ccHHHHHHHCC-CHHHHHH
Confidence              567888888777432211          011112  355666666666666554333  35665555433 4455667


Q ss_pred             HHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 001436          681 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDP  760 (1078)
Q Consensus       681 Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~  760 (1078)
                      |++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|++.|++++.    
T Consensus       143 Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~----  218 (434)
T PHA02874        143 LFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMN----  218 (434)
T ss_pred             HHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcC----
Confidence            7777777777777777777777777777777777777777777777777777777777777777777777776655    


Q ss_pred             CCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH-----HHHHHHHHHccCCCCCCCCCcc
Q 001436          761 SPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI-----AKAVQTVSEKTATPANDNDESD  835 (1078)
Q Consensus       761 ~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~-----~~~v~~Lle~ga~~~~~~~~e~  835 (1078)
                        ++..|.||||+|+..++ .++.+|+ .|     ++++.+|..|.||+|+|.     .++++.|++.|++++..+    
T Consensus       219 --~~~~g~TpL~~A~~~~~-~~i~~Ll-~~-----~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d----  285 (434)
T PHA02874        219 --KCKNGFTPLHNAIIHNR-SAIELLI-NN-----ASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKD----  285 (434)
T ss_pred             --CCCCCCCHHHHHHHCCh-HHHHHHH-cC-----CCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCC----
Confidence              33567777777776654 3444444 33     236666666777777655     256666777776655433    


Q ss_pred             hhcccchHHHHHHHHH
Q 001436          836 VLSLKDSLTAICNATQ  851 (1078)
Q Consensus       836 ~lslkdsltAl~~Aaq  851 (1078)
                          ..+.|+++.|..
T Consensus       286 ----~~g~TpL~~A~~  297 (434)
T PHA02874        286 ----NKGENPIDTAFK  297 (434)
T ss_pred             ----CCCCCHHHHHHH
Confidence                455666666553

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.96  E-value=1.7e-27  Score=280.87  Aligned_cols=272  Identities=14%  Similarity=0.087  Sum_probs=232.1

Q ss_pred             ccchhhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHHH
Q 001436          524 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLH  603 (1078)
Q Consensus       524 ~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl~  603 (1078)
                      +++++||..|+.++++.|++.|+.  .+..+..|.||||+|+..++  .++++  +++..|++++......       ..
T Consensus        37 tpL~~A~~~g~~~iv~~Ll~~Ga~--~n~~~~~~~t~L~~A~~~~~--~~iv~--~Ll~~g~~~~~~~~~~-------~~  103 (434)
T PHA02874         37 TPLIDAIRSGDAKIVELFIKHGAD--INHINTKIPHPLLTAIKIGA--HDIIK--LLIDNGVDTSILPIPC-------IE  103 (434)
T ss_pred             CHHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCC--HHHHH--HHHHCCCCCCcchhcc-------CC
Confidence            456799999999999999999998  66778889999999999998  77766  6777777655432111       24


Q ss_pred             HHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHh
Q 001436          604 LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCE  683 (1078)
Q Consensus       604 ~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle  683 (1078)
                      .+++++|+..|.+.+..+..|.|++|+|+..+..  +.++.|++.+++++..+..+  .+++|.++.. +...++++|++
T Consensus       104 ~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~--~~v~~Ll~~gad~n~~d~~g--~tpLh~A~~~-~~~~iv~~Ll~  178 (434)
T PHA02874        104 KDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDL--ESIKMLFEYGADVNIEDDNG--CYPIHIAIKH-NFFDIIKLLLE  178 (434)
T ss_pred             HHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCH--HHHHHHHhCCCCCCCcCCCC--CCHHHHHHHC-CcHHHHHHHHH
Confidence            5788999999988888899999999999999994  89999999999988776544  5888877764 46678999999


Q ss_pred             CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 001436          684 DGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPE  763 (1078)
Q Consensus       684 ~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~  763 (1078)
                      .|++++..|..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..++ .++.+|+ .|++++.      +
T Consensus       179 ~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~------~  250 (434)
T PHA02874        179 KGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASIND------Q  250 (434)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCC------c
Confidence            999999999999999999999999999999999999999999999999999999876 5666666 6888876      5


Q ss_pred             CCCCCCHHHHHHhcC-cHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHH-----HHHHHHHHccCC
Q 001436          764 FPLSRTPSDLASSNG-HKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA-----KAVQTVSEKTAT  826 (1078)
Q Consensus       764 D~~G~TPLhlAa~~G-~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~-----~~v~~Lle~ga~  826 (1078)
                      |..|.||||+|+..+ +.+++++|+++|++     ++.+|..|.||+++|..     ..++.|+..++.
T Consensus       251 d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad-----~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~  314 (434)
T PHA02874        251 DIDGSTPLHHAINPPCDIDIIDILLYHKAD-----ISIKDNKGENPIDTAFKYINKDPVIKDIIANAVL  314 (434)
T ss_pred             CCCCCCHHHHHHhcCCcHHHHHHHHHCcCC-----CCCCCCCCCCHHHHHHHhCCccHHHHHHHHhcCc
Confidence            679999999999876 78999999999964     89999999999999863     467778877764

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.96  E-value=1.3e-27  Score=285.15  Aligned_cols=265  Identities=15%  Similarity=0.077  Sum_probs=136.5

Q ss_pred             cccchhhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHH
Q 001436          523 VAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL  602 (1078)
Q Consensus       523 ~~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl  602 (1078)
                      .+++++||..|+.++++.|++.|++  .+..+..|+||||+||..++  .+++.  +++..+...+.  ..  +.++++.
T Consensus        38 ~tPLh~A~~~g~~e~vk~Ll~~gad--vn~~d~~g~TpLh~A~~~g~--~~~v~--~Ll~~~~~~~~--~~--~~~~l~~  107 (477)
T PHA02878         38 FIPLHQAVEARNLDVVKSLLTRGHN--VNQPDHRDLTPLHIICKEPN--KLGMK--EMIRSINKCSV--FY--TLVAIKD  107 (477)
T ss_pred             cchHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCcc--HhHHH--HHHHHHhcccc--cc--chhhHHH
Confidence            3456799999999999999999987  67778889999999998877  45444  33333332222  11  2344433


Q ss_pred             -----HHHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHH
Q 001436          603 -----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWL  677 (1078)
Q Consensus       603 -----~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~l  677 (1078)
                           +.+++++|+..+........  ...+........+..+.++.|++.|++++..+.. .+.+++|.|+.. +...+
T Consensus       108 a~~~~~~ei~~~Ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~-~g~tpLh~A~~~-~~~~i  183 (477)
T PHA02878        108 AFNNRNVEIFKIILTNRYKNIQTID--LVYIDKKSKDDIIEAEITKLLLSYGADINMKDRH-KGNTALHYATEN-KDQRL  183 (477)
T ss_pred             HHHcCCHHHHHHHHhCcccCcccCc--HHHHhhccchhhHHHHHHHHHHHcCCCCCccCCC-CCCCHHHHHHhC-CCHHH
Confidence                 44555555544311110000  0000000000010013445555555555544432 013444444433 23344


Q ss_pred             HHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHc-CCHHHHHHHHHcCCCCCC
Q 001436          678 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYC-GREKTVAVLLSLGAAPGL  756 (1078)
Q Consensus       678 vk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~-G~~eiV~~LL~~GAdvn~  756 (1078)
                      +++|++.|++++.+|..|.||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+.. ++.+++++|+++|+++|.
T Consensus       184 v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~  263 (477)
T PHA02878        184 TELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNA  263 (477)
T ss_pred             HHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCc
Confidence            5555555555555555555555555555555555555555555555555555555555543 455555555555555554


Q ss_pred             CCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH
Q 001436          757 LTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI  813 (1078)
Q Consensus       757 ~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~  813 (1078)
                      .++     ..|.||||+|  .++.+++++|+++|++     +|..|..|.||++.|.
T Consensus       264 ~~~-----~~g~TpLh~A--~~~~~~v~~Ll~~gad-----in~~d~~g~TpL~~A~  308 (477)
T PHA02878        264 KSY-----ILGLTALHSS--IKSERKLKLLLEYGAD-----INSLNSYKLTPLSSAV  308 (477)
T ss_pred             cCC-----CCCCCHHHHH--ccCHHHHHHHHHCCCC-----CCCcCCCCCCHHHHHH
Confidence            221     2455555555  2345555555555532     5555555555555544

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.95  E-value=2.4e-27  Score=282.19  Aligned_cols=250  Identities=18%  Similarity=0.161  Sum_probs=225.9

Q ss_pred             ccchhhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHH-----HHhCCCcccchhhhhhccCCCCCCcccCCCCCCcc
Q 001436          524 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYI-----TCSNRLACSEVREFDYIVGSVKDADISDIYGSSTS  598 (1078)
Q Consensus       524 ~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhv-----A~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t  598 (1078)
                      +++++||..|+.++++.|++.|+.  ....+..|.||||+     |+..+.  .+++.  +++..|++++..|..|  .|
T Consensus        37 t~L~~A~~~~~~~ivk~Ll~~g~~--~~~~~~~~~t~L~~~~~~~a~~~~~--~~iv~--~Ll~~ga~i~~~d~~g--~t  108 (480)
T PHA03100         37 LPLYLAKEARNIDVVKILLDNGAD--INSSTKNNSTPLHYLSNIKYNLTDV--KEIVK--LLLEYGANVNAPDNNG--IT  108 (480)
T ss_pred             hhhhhhhccCCHHHHHHHHHcCCC--CCCccccCcCHHHHHHHHHHHhhch--HHHHH--HHHHCCCCCCCCCCCC--Cc
Confidence            457799999999999999999988  66677889999999     999888  66666  7788899999988888  89


Q ss_pred             HHHHH-------HHHHHHHHhCCCCCcCCccCcccHHHHHHHhc--cchhHHHHHHHhhcCCCCCcCcccccchHHHHHH
Q 001436          599 ESFLH-------LRLERILSMRSSPQNHLSEGLCEKQKLISKII--QLKEEEESYQMVEANPEKNLSQHVEKYQILQKIM  669 (1078)
Q Consensus       599 ~Lhl~-------~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~--~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa  669 (1078)
                      |||+.       .+++++|+..|++.+..+..|.+++|+|+..+  .  .+.++.|++.+++++..+..  +.+++|.|+
T Consensus       109 pL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~--~~iv~~Ll~~g~din~~d~~--g~tpL~~A~  184 (480)
T PHA03100        109 PLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKID--LKILKLLIDKGVDINAKNRY--GYTPLHIAV  184 (480)
T ss_pred             hhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCCh--HHHHHHHHHCCCCcccccCC--CCCHHHHHH
Confidence            99874       47899999999888888999999999999999  7  59999999999998877653  358888887


Q ss_pred             HHcCHHHHHHHHHhCCCCCCccCCCC------CcHHHHHHHcCC--HHHHHHHHhCCCCccccCCCCchHHHHHHHcCCH
Q 001436          670 KEKLYSWLLRKVCEDGKGPCILDDEG------QGVLHLAASLGY--DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE  741 (1078)
Q Consensus       670 ~~~~~~~lvk~Lle~Gad~n~~d~~G------~TpLH~Aa~~G~--~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~  741 (1078)
                      ..+ ...++++|++.|++++..+..|      .||||+|+..|+  .+++++|+++|+++|.+|..|+||||+|+..|+.
T Consensus       185 ~~~-~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~  263 (480)
T PHA03100        185 EKG-NIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNP  263 (480)
T ss_pred             HhC-CHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence            766 6678999999999999999999      999999999999  9999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCC
Q 001436          742 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT  792 (1078)
Q Consensus       742 eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~  792 (1078)
                      +++++|++.|++++.      +|..|.||||+|+..++.+++++|+++|++
T Consensus       264 ~iv~~Ll~~gad~n~------~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~  308 (480)
T PHA03100        264 EFVKYLLDLGANPNL------VNKYGDTPLHIAILNNNKEIFKLLLNNGPS  308 (480)
T ss_pred             HHHHHHHHcCCCCCc------cCCCCCcHHHHHHHhCCHHHHHHHHhcCCC
Confidence            999999999999988      457999999999999999999999999965

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.95  E-value=2.2e-27  Score=290.76  Aligned_cols=251  Identities=13%  Similarity=0.028  Sum_probs=207.3

Q ss_pred             chhhh--hcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHHH
Q 001436          526 CKWSC--MFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLH  603 (1078)
Q Consensus       526 ~~~Ac--~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl~  603 (1078)
                      +++|+  ..|+.++++.|++.|++  .+..+..|.||||+|+..++.+.++++  +++..|+++|.+|..|  +||||..
T Consensus       181 LH~A~~n~~~~~eIVklLLe~GAD--VN~kD~~G~TPLH~Aa~~g~~~~eIVk--lLLe~GADVN~kD~~G--~TPLh~A  254 (764)
T PHA02716        181 LHAYLGNMYVDIDILEWLCNNGVN--VNLQNNHLITPLHTYLITGNVCASVIK--KIIELGGDMDMKCVNG--MSPIMTY  254 (764)
T ss_pred             HHHHHHhccCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCCCHHHHH--HHHHcCCCCCCCCCCC--CCHHHHH
Confidence            45664  46788999999999998  777889999999999998874456666  7788899999999888  8998741


Q ss_pred             ------------------------------------------HHHHHHHHhCCCCCcCCccCcccHHHHHHHh--ccchh
Q 001436          604 ------------------------------------------LRLERILSMRSSPQNHLSEGLCEKQKLISKI--IQLKE  639 (1078)
Q Consensus       604 ------------------------------------------~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~--~~l~~  639 (1078)
                                                                .+++++|+..|++.+..+..|.||||+|+..  ++  .
T Consensus       255 i~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~--~  332 (764)
T PHA02716        255 IINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNIS--T  332 (764)
T ss_pred             HHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCC--c
Confidence                                                      3577889999988888899999999997654  34  4


Q ss_pred             HHHHHHHhhcCCCCCcCcccccchHHHHHHHH-------------cCHHHHHHHHHhCCCCCCccCCCCCcHHHHH----
Q 001436          640 EEESYQMVEANPEKNLSQHVEKYQILQKIMKE-------------KLYSWLLRKVCEDGKGPCILDDEGQGVLHLA----  702 (1078)
Q Consensus       640 ~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~-------------~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~A----  702 (1078)
                      ++++.|++.|++++..+..+  .+++|.++..             .+...++++|++.|++++.+|..|.||||.+    
T Consensus       333 eIVklLLe~GADIN~kD~~G--~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a  410 (764)
T PHA02716        333 DIIKLLHEYGNDLNEPDNIG--NTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTA  410 (764)
T ss_pred             hHHHHHHHcCCCCccCCCCC--CCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHH
Confidence            88999999999998876544  6899877542             3567899999999999999999999999942    


Q ss_pred             HHcCCHHHHHHHHhCCC-------------------------------------------------------------Cc
Q 001436          703 ASLGYDWAIKPTVTAGV-------------------------------------------------------------SI  721 (1078)
Q Consensus       703 a~~G~~~iv~~LL~~Ga-------------------------------------------------------------di  721 (1078)
                      ...++.+++++|++.|+                                                             ++
T Consensus       411 ~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nv  490 (764)
T PHA02716        411 QNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNN  490 (764)
T ss_pred             HhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccc
Confidence            23467888888877543                                                             33


Q ss_pred             cccCCCCchHHHHHHHcCCHH-----HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcH-----HHHHHHHHcCC
Q 001436          722 NFRDLSGWTALHWAAYCGREK-----TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHK-----GISGFLAESSL  791 (1078)
Q Consensus       722 n~~D~~G~TpLH~Aa~~G~~e-----iV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~-----~iv~~LLe~ga  791 (1078)
                      |..|..|+||||+|+..|+.+     ++++||+.||++|+      +|..|+||||+|+.+|+.     +++++||++|+
T Consensus       491 N~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~------~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga  564 (764)
T PHA02716        491 AVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINI------PTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRP  564 (764)
T ss_pred             cccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcc------cCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCC
Confidence            556788999999999999875     45999999999998      558999999999999976     99999999996


Q ss_pred             C
Q 001436          792 T  792 (1078)
Q Consensus       792 ~  792 (1078)
                      +
T Consensus       565 ~  565 (764)
T PHA02716        565 N  565 (764)
T ss_pred             C
Confidence            5

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.95  E-value=3.8e-27  Score=281.14  Aligned_cols=266  Identities=15%  Similarity=0.082  Sum_probs=218.1

Q ss_pred             CCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHH-----HHHHHHHHHhCCCCCcCCccCcccH
Q 001436          553 PHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-----HLRLERILSMRSSPQNHLSEGLCEK  627 (1078)
Q Consensus       553 ~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl-----~~rlvkLLl~~g~~~~~~~~~g~t~  627 (1078)
                      ....|.||||+|+..|+  .++++  +++..|+++|..|..|  .||||+     +..+++.|+..+.....  ..+.++
T Consensus        33 ~~~~~~tPLh~A~~~g~--~e~vk--~Ll~~gadvn~~d~~g--~TpLh~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~~  104 (477)
T PHA02878         33 ASLIPFIPLHQAVEARN--LDVVK--SLLTRGHNVNQPDHRD--LTPLHIICKEPNKLGMKEMIRSINKCSV--FYTLVA  104 (477)
T ss_pred             ccccCcchHHHHHHcCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHHHHCccHhHHHHHHHHHhcccc--ccchhh
Confidence            35578999999999998  77776  7778899999999888  999998     44678888876532222  456789


Q ss_pred             HHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHH-HHHHcCHHHHHHHHHhCCCCCCccCCC-CCcHHHHHHHc
Q 001436          628 QKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQK-IMKEKLYSWLLRKVCEDGKGPCILDDE-GQGVLHLAASL  705 (1078)
Q Consensus       628 lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~-aa~~~~~~~lvk~Lle~Gad~n~~d~~-G~TpLH~Aa~~  705 (1078)
                      ++.|+..++  .++++.|+..+....... +.   ..+.. .........++++|++.|+++|.+|.. |.||||+||..
T Consensus       105 l~~a~~~~~--~ei~~~Ll~~~~~~~~~~-~~---~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~  178 (477)
T PHA02878        105 IKDAFNNRN--VEIFKIILTNRYKNIQTI-DL---VYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATEN  178 (477)
T ss_pred             HHHHHHcCC--HHHHHHHHhCcccCcccC-cH---HHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhC
Confidence            999999998  488999985544332211 10   11111 111122345899999999999999998 99999999999


Q ss_pred             CCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhc-CcHHHHH
Q 001436          706 GYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSN-GHKGISG  784 (1078)
Q Consensus       706 G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~-G~~~iv~  784 (1078)
                      |+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|++.|++++.      +|..|.||||+|+.. ++.++++
T Consensus       179 ~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~------~d~~g~TpLh~A~~~~~~~~iv~  252 (477)
T PHA02878        179 KDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDA------RDKCGNTPLHISVGYCKDYDILK  252 (477)
T ss_pred             CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHhcCCHHHHH
Confidence            999999999999999999999999999999999999999999999999988      557999999999975 7899999


Q ss_pred             HHHHcCCCcccccCccCCC-CCCChhHHhH--HHHHHHHHHccCCCCCCCCCcchhcccchHHHHHHHHH
Q 001436          785 FLAESSLTSLLLSLKMNDS-ADDGALEDSI--AKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQ  851 (1078)
Q Consensus       785 ~LLe~ga~~~~adln~kd~-~g~tal~~a~--~~~v~~Lle~ga~~~~~~~~e~~lslkdsltAl~~Aaq  851 (1078)
                      +|+++|++     ++.++. .|.||+|.|.  ...++.|++.|++++..+        .++.||++.|+.
T Consensus       253 ~Ll~~gad-----vn~~~~~~g~TpLh~A~~~~~~v~~Ll~~gadin~~d--------~~g~TpL~~A~~  309 (477)
T PHA02878        253 LLLEHGVD-----VNAKSYILGLTALHSSIKSERKLKLLLEYGADINSLN--------SYKLTPLSSAVK  309 (477)
T ss_pred             HHHHcCCC-----CCccCCCCCCCHHHHHccCHHHHHHHHHCCCCCCCcC--------CCCCCHHHHHHH
Confidence            99999965     777775 6999999985  578999999999988754        578899999976

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.95  E-value=2.7e-27  Score=278.50  Aligned_cols=289  Identities=19%  Similarity=0.132  Sum_probs=237.9

Q ss_pred             ccchhhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHH-
Q 001436          524 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-  602 (1078)
Q Consensus       524 ~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl-  602 (1078)
                      ++++||+.....+.+..|++.|++  ..+.+..+.+|||+|+..+.  .+...  .++..++++|..|..|  .||+|+ 
T Consensus        90 ~~l~~a~~~~~~~~i~~Lls~gad--~~~~n~~~~aplh~A~~~~~--~s~L~--~Ll~~~~dvnl~de~~--~TpLh~A  161 (929)
T KOG0510|consen   90 TPLHAAVEYNQGDKIQVLLSYGAD--TPLRNLNKNAPLHLAADSGN--YSCLK--LLLDYGADVNLEDENG--FTPLHLA  161 (929)
T ss_pred             chhHHHhhcchHHHHHHHHhcCCC--CChhhhhccCchhhccccch--HHHHH--HHHHhcCCccccccCC--CchhhHH
Confidence            457799999999999999999999  77778999999999997654  33333  5667779999999888  999999 


Q ss_pred             ----HHHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHh-----hcCCCCCcCcccccchHHHHHHHHcC
Q 001436          603 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMV-----EANPEKNLSQHVEKYQILQKIMKEKL  673 (1078)
Q Consensus       603 ----~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~-----~~ad~n~~s~~~~~~t~L~~aa~~~~  673 (1078)
                          +.+..++|+..++++...+..|+.++|.|+..++  .+..+..+.     ....+|-.+.  .+.+++|.++ +++
T Consensus       162 ~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s--~e~mEi~l~~~g~~r~~~in~~~n--~~~~pLhlAv-e~g  236 (929)
T KOG0510|consen  162 ARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGS--KECMEIFLPEHGYERQTHINFDNN--EKATPLHLAV-EGG  236 (929)
T ss_pred             HhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcc--hhhhhhhhccccchhhcccccccC--CCCcchhhhh-hcC
Confidence                6788899999998888999999999999999999  477887774     3444554443  3346666655 566


Q ss_pred             HHHHHHHHHhCCCC---------------CCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHc
Q 001436          674 YSWLLRKVCEDGKG---------------PCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYC  738 (1078)
Q Consensus       674 ~~~lvk~Lle~Gad---------------~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~  738 (1078)
                      +..+++.+++.|+.               +|..|.+|.||||+||..|+.++++.|+..|++++.++.++.||||.||.+
T Consensus       237 ~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~y  316 (929)
T KOG0510|consen  237 DIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIY  316 (929)
T ss_pred             CHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHc
Confidence            66778888887754               345689999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH----H
Q 001436          739 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----A  814 (1078)
Q Consensus       739 G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~----~  814 (1078)
                      |+..+|+-||+ -.+...   .+..|-.|.||||+|+..||..++++||+.|+..+-  ..-.|..|.||||.|+    .
T Consensus       317 g~~ntv~rLL~-~~~~rl---lne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~--~~e~D~dg~TaLH~Aa~~g~~  390 (929)
T KOG0510|consen  317 GRINTVERLLQ-ESDTRL---LNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLN--MSEADSDGNTALHLAAKYGNT  390 (929)
T ss_pred             ccHHHHHHHHh-CcCccc---cccccccCCCchhhhhhcCHHHHHHHHHhcChhhhc--ccccccCCchhhhHHHHhccH
Confidence            99999999999 222222   234788999999999999999999999999976221  1134888999999988    5


Q ss_pred             HHHHHHHHccCCCCCCC
Q 001436          815 KAVQTVSEKTATPANDN  831 (1078)
Q Consensus       815 ~~v~~Lle~ga~~~~~~  831 (1078)
                      .+|+.|+..|+++...+
T Consensus       391 ~av~~Li~~Ga~I~~~n  407 (929)
T KOG0510|consen  391 SAVQKLISHGADIGVKN  407 (929)
T ss_pred             HHHHHHHHcCCceeecc
Confidence            68899999999986543

>PHA02730 ankyrin-like protein; Provisional

Probab=99.95  E-value=1.8e-26  Score=278.19  Aligned_cols=306  Identities=11%  Similarity=0.049  Sum_probs=238.7

Q ss_pred             cccchhhhhcC---CchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccH
Q 001436          523 VAKCKWSCMFA---EVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSE  599 (1078)
Q Consensus       523 ~~~~~~Ac~fG---~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~  599 (1078)
                      .+.++||+..|   +.++++.||++|++  ....+..|+||||+|+..++.-.++++++.....+++++..|..+  .++
T Consensus        42 ~TaLh~A~~~~~~~~~eivklLLs~GAd--in~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~--d~~  117 (672)
T PHA02730         42 NNALHCYVSNKCDTDIKIVRLLLSRGVE--RLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIN--DFD  117 (672)
T ss_pred             CcHHHHHHHcCCcCcHHHHHHHHhCCCC--CcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccC--Cch
Confidence            45678999987   58999999999999  778899999999999986632267777444333355667777666  778


Q ss_pred             HHH-------HHHHHHHHHh-CCCCCcCCc-----cCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcC-----ccccc
Q 001436          600 SFL-------HLRLERILSM-RSSPQNHLS-----EGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLS-----QHVEK  661 (1078)
Q Consensus       600 Lhl-------~~rlvkLLl~-~g~~~~~~~-----~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s-----~~~~~  661 (1078)
                      ++.       +.+++++|+. ++.++....     ..|.++++++...+.  .++++.|++.|+++++..     .+...
T Consensus       118 l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~--~eIvklLi~~g~~v~g~~~~~~~~~~~~  195 (672)
T PHA02730        118 LYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPR--PEVLLWLLKSECYSTGYVFRSCMYDSDR  195 (672)
T ss_pred             HHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCc--hHHHHHHHHcCCcccccccccccccCCc
Confidence            877       4579999996 544444332     378899999999999  599999999999986331     12222


Q ss_pred             c-hHHHHH-----HHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHH--HHHcCCHHHHHHHHh-----------------
Q 001436          662 Y-QILQKI-----MKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHL--AASLGYDWAIKPTVT-----------------  716 (1078)
Q Consensus       662 ~-t~L~~a-----a~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~--Aa~~G~~~iv~~LL~-----------------  716 (1078)
                      . +.||..     ........++++|+++|+++|.+|..|.||||+  |+..|+.++|++|++                 
T Consensus       196 c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~  275 (672)
T PHA02730        196 CKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIR  275 (672)
T ss_pred             cchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhh
Confidence            2 334411     135567789999999999999999999999995  556688999999999                 


Q ss_pred             ---------------CCCCccc--------------------cCCCCch---------------------HHHHHHHcC-
Q 001436          717 ---------------AGVSINF--------------------RDLSGWT---------------------ALHWAAYCG-  739 (1078)
Q Consensus       717 ---------------~Gadin~--------------------~D~~G~T---------------------pLH~Aa~~G-  739 (1078)
                                     +|+|+..                    .|..|.+                     .||.-...| 
T Consensus       276 ~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~  355 (672)
T PHA02730        276 GVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGD  355 (672)
T ss_pred             hhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCC
Confidence                           7998877                    6677765                     677777755 


Q ss_pred             --CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCc----HHHHHHHHHcCCCcccccCccCCCCCCChhHH--
Q 001436          740 --REKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGH----KGISGFLAESSLTSLLLSLKMNDSADDGALED--  811 (1078)
Q Consensus       740 --~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~----~~iv~~LLe~ga~~~~adln~kd~~g~tal~~--  811 (1078)
                        +.++|++||++||++|..       ..|.||||+|+..++    .+++++|+++|+.   .++|.+|..|.||+|.  
T Consensus       356 ~v~ieIvelLIs~GAdIN~k-------~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~---~dIN~kd~~G~T~Lh~~i  425 (672)
T PHA02730        356 MVSIPILRCMLDNGATMDKT-------TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGH---MAINHVSNNGRLCMYGLI  425 (672)
T ss_pred             cCcHHHHHHHHHCCCCCCcC-------CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCC---ccccccccCCCchHhHHH
Confidence              689999999999999962       489999999998875    8999999999974   4689999999999983  


Q ss_pred             -hH-------------HHHHHHHHHccCCCCCCCCCcchhcccchHHHHHHHHHH
Q 001436          812 -SI-------------AKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQA  852 (1078)
Q Consensus       812 -a~-------------~~~v~~Lle~ga~~~~~~~~e~~lslkdsltAl~~Aaqa  852 (1078)
                       +.             ..+++.|+..|++++..+        +.+.||++.|+..
T Consensus       426 ~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD--------~~G~TPLh~Aa~~  472 (672)
T PHA02730        426 LSRFNNCGYHCYETILIDVFDILSKYMDDIDMID--------NENKTLLYYAVDV  472 (672)
T ss_pred             HHHhccccccccchhHHHHHHHHHhcccchhccC--------CCCCCHHHHHHHh
Confidence             21             134799999999877654        6788999999763

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.95  E-value=2.1e-27  Score=238.13  Aligned_cols=211  Identities=22%  Similarity=0.210  Sum_probs=168.7

Q ss_pred             hhhhhcCCchHHHHHHHCCCCccCCCC-CCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHHHHH
Q 001436          527 KWSCMFAEVEVPAEVLADGVLCCRIPP-HAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLR  605 (1078)
Q Consensus       527 ~~Ac~fG~veVv~~LLq~Gv~rC~~p~-~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl~~r  605 (1078)
                      .-.|+.-...-+.++++.... ..+.. +.+|+||||+||+-|+  .+++.|+.. ..+..+|-+|..|  |+|||    
T Consensus         8 ~~~~~~~~~~kveel~~s~~k-SL~~r~dqD~Rt~LHwa~S~g~--~eiv~fLls-q~nv~~ddkDdaG--WtPlh----   77 (226)
T KOG4412|consen    8 KAICENCEEFKVEELIQSDPK-SLNARDDQDGRTPLHWACSFGH--VEIVYFLLS-QPNVKPDDKDDAG--WTPLH----   77 (226)
T ss_pred             HHHHhhchHHHHHHHHhcChh-hhhccccccCCceeeeeeecCc--hhHHHHHHh-cCCCCCCCccccC--Cchhh----
Confidence            456777777788888887652 23444 5599999999999999  888886543 4444555444444  55554    


Q ss_pred             HHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHhC-
Q 001436          606 LERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCED-  684 (1078)
Q Consensus       606 lvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~-  684 (1078)
                                              +|+..+.                                      ..+|+.|+.+ 
T Consensus        78 ------------------------ia~s~g~--------------------------------------~evVk~Ll~r~   95 (226)
T KOG4412|consen   78 ------------------------IAASNGN--------------------------------------DEVVKELLNRS   95 (226)
T ss_pred             ------------------------hhhhcCc--------------------------------------HHHHHHHhcCC
Confidence                                    4444443                                      2345666665 


Q ss_pred             CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 001436          685 GKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEF  764 (1078)
Q Consensus       685 Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D  764 (1078)
                      |+|+|..+..|+|+||||+..|..+++++|+++|+.|+.+|..|.||||-||.-|..+++++|+..|+.+|.      +|
T Consensus        96 ~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~------qD  169 (226)
T KOG4412|consen   96 GADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNT------QD  169 (226)
T ss_pred             CCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCc------cc
Confidence            899999999999999999999999999999999999999999999999999999999999999999999988      67


Q ss_pred             CCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHHHHHHHHH
Q 001436          765 PLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVS  821 (1078)
Q Consensus       765 ~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~~~v~~Ll  821 (1078)
                      ..|+||||.|...||.+++.+|+++|+     ++++.|++| ||+.++...-...+.
T Consensus       170 k~G~TpL~~al~e~~~d~a~lLV~~gA-----d~~~edke~-t~~~~a~~~l~~alk  220 (226)
T KOG4412|consen  170 KYGFTPLHHALAEGHPDVAVLLVRAGA-----DTDREDKEG-TALRIACNELLEALK  220 (226)
T ss_pred             ccCccHHHHHHhccCchHHHHHHHhcc-----ceeeccccC-chHHHHHHHHHHHHH
Confidence            899999999999999999999999995     588899977 998876654444433

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.95  E-value=3.6e-26  Score=273.99  Aligned_cols=271  Identities=9%  Similarity=-0.012  Sum_probs=219.6

Q ss_pred             hcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHHH-------
Q 001436          531 MFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLH-------  603 (1078)
Q Consensus       531 ~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl~-------  603 (1078)
                      ...+.++++.||+.|++  .+.. ..|.||||+++..+....++++  +++..|+++|..+ .+  .||||..       
T Consensus        12 ~~~~~~~v~~LL~~Gad--vN~~-~~g~t~l~~~~~~~~~~~~iv~--~Ll~~GAdvn~~~-~~--~tpL~~a~~~~~~~   83 (494)
T PHA02989         12 DTVDKNALEFLLRTGFD--VNEE-YRGNSILLLYLKRKDVKIKIVK--LLIDNGADVNYKG-YI--ETPLCAVLRNREIT   83 (494)
T ss_pred             CcCcHHHHHHHHHcCCC--cccc-cCCCCHHHHHHhcCCCChHHHH--HHHHcCCCccCCC-CC--CCcHHHHHhccCcc
Confidence            35788999999999998  4444 5699999876644332256666  7788899999875 33  7888863       


Q ss_pred             ----HHHHHHHHhCCCCCcCCccCcccHHHHHHHh---ccchhHHHHHHHhhcCCC-CCcCcccccchHHHHHHHH-cCH
Q 001436          604 ----LRLERILSMRSSPQNHLSEGLCEKQKLISKI---IQLKEEEESYQMVEANPE-KNLSQHVEKYQILQKIMKE-KLY  674 (1078)
Q Consensus       604 ----~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~---~~l~~~~~~~LL~~~ad~-n~~s~~~~~~t~L~~aa~~-~~~  674 (1078)
                          .+++++|+..|++.+..+..|.||||.|...   +.  .++++.|+++|+++ +..+..  +.+++|.++.. .+.
T Consensus        84 ~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~--~eiv~~Ll~~Gadin~~~d~~--g~tpLh~a~~~~~~~  159 (494)
T PHA02989         84 SNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINN--CDMLRFLLSKGINVNDVKNSR--GYNLLHMYLESFSVK  159 (494)
T ss_pred             hhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCc--HHHHHHHHHCCCCcccccCCC--CCCHHHHHHHhccCC
Confidence                4689999999988888899999999987654   34  48899999999998 555443  35888887764 356


Q ss_pred             HHHHHHHHhCCCCCCc-cCCCCCcHHHHHHHcC----CHHHHHHHHhCCCCccccCCCCchHHHHHHHcC------CHHH
Q 001436          675 SWLLRKVCEDGKGPCI-LDDEGQGVLHLAASLG----YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCG------REKT  743 (1078)
Q Consensus       675 ~~lvk~Lle~Gad~n~-~d~~G~TpLH~Aa~~G----~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G------~~ei  743 (1078)
                      ..++++|++.|++++. .+..|.||||+|+..+    +.+++++|+++|+++|.+|..|.||||.++..+      ..++
T Consensus       160 ~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~i  239 (494)
T PHA02989        160 KDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKV  239 (494)
T ss_pred             HHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHH
Confidence            7899999999999998 6889999999998764    889999999999999999999999999877643      4677


Q ss_pred             HHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH----HHHHHH
Q 001436          744 VAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQT  819 (1078)
Q Consensus       744 V~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~----~~~v~~  819 (1078)
                      +++|+. |+++|.      +|..|.||||+|+..|+.+++++|++.|+     +++.+|..|.||++.|.    ...++.
T Consensus       240 l~~l~~-~advn~------~d~~G~TpL~~Aa~~~~~~~v~~LL~~Ga-----din~~d~~G~TpL~~A~~~~~~~iv~~  307 (494)
T PHA02989        240 LNFILK-YIKINK------KDKKGFNPLLISAKVDNYEAFNYLLKLGD-----DIYNVSKDGDTVLTYAIKHGNIDMLNR  307 (494)
T ss_pred             HHHHHh-CCCCCC------CCCCCCCHHHHHHHhcCHHHHHHHHHcCC-----CccccCCCCCCHHHHHHHcCCHHHHHH
Confidence            776654 788887      56799999999999999999999999995     48899999999999987    456666


Q ss_pred             HHHccC
Q 001436          820 VSEKTA  825 (1078)
Q Consensus       820 Lle~ga  825 (1078)
                      |++.+.
T Consensus       308 LL~~~p  313 (494)
T PHA02989        308 ILQLKP  313 (494)
T ss_pred             HHhcCC
Confidence            766654

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.95  E-value=1.5e-26  Score=270.62  Aligned_cols=240  Identities=15%  Similarity=0.083  Sum_probs=196.8

Q ss_pred             cchhhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHHHH
Q 001436          525 KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHL  604 (1078)
Q Consensus       525 ~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl~~  604 (1078)
                      .+.-||.+|+.+++..|++.|++  .+.....|.||||+|+..+.  .+++.  +++..|++++..+.            
T Consensus         5 ~L~~A~~~g~~~iv~~Ll~~g~~--~n~~~~~g~tpL~~A~~~~~--~~~v~--~Ll~~ga~~~~~~~------------   66 (413)
T PHA02875          5 ALCDAILFGELDIARRLLDIGIN--PNFEIYDGISPIKLAMKFRD--SEAIK--LLMKHGAIPDVKYP------------   66 (413)
T ss_pred             HHHHHHHhCCHHHHHHHHHCCCC--CCccCCCCCCHHHHHHHcCC--HHHHH--HHHhCCCCccccCC------------
Confidence            35679999999999999999988  55667789999999998877  55555  55555665554433            


Q ss_pred             HHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHhC
Q 001436          605 RLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCED  684 (1078)
Q Consensus       605 rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~  684 (1078)
                                        .+.+++|.|+..++.  +.++.|+..+...+.... ..+.+++|.|+..+ ...++++|++.
T Consensus        67 ------------------~~~t~L~~A~~~g~~--~~v~~Ll~~~~~~~~~~~-~~g~tpL~~A~~~~-~~~iv~~Ll~~  124 (413)
T PHA02875         67 ------------------DIESELHDAVEEGDV--KAVEELLDLGKFADDVFY-KDGMTPLHLATILK-KLDIMKLLIAR  124 (413)
T ss_pred             ------------------CcccHHHHHHHCCCH--HHHHHHHHcCCccccccc-CCCCCHHHHHHHhC-CHHHHHHHHhC
Confidence                              346778888988884  888999977766544321 12357888777655 56789999999


Q ss_pred             CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 001436          685 GKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEF  764 (1078)
Q Consensus       685 Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D  764 (1078)
                      |++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++..+      
T Consensus       125 gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~------  198 (413)
T PHA02875        125 GADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFG------  198 (413)
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCC------
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999855      


Q ss_pred             CCC-CCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHh
Q 001436          765 PLS-RTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDS  812 (1078)
Q Consensus       765 ~~G-~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a  812 (1078)
                      ..| .||+|+|+..|+.+++++|+++|+++..  ++..+..+.|+++..
T Consensus       199 ~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~--~~~~~~~~~t~l~~~  245 (413)
T PHA02875        199 KNGCVAALCYAIENNKIDIVRLFIKRGADCNI--MFMIEGEECTILDMI  245 (413)
T ss_pred             CCCCchHHHHHHHcCCHHHHHHHHHCCcCcch--HhhcCCCchHHHHHH
Confidence            354 5899999999999999999999987443  233466678888753

>PHA02791 ankyrin-like protein; Provisional

Probab=99.94  E-value=3.6e-26  Score=254.63  Aligned_cols=234  Identities=9%  Similarity=0.023  Sum_probs=186.8

Q ss_pred             cCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHHHHHHHHHHH
Q 001436          532 FAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILS  611 (1078)
Q Consensus       532 fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl~~rlvkLLl  611 (1078)
                      .|..+++..|++.|..    ..+..|.||||+||..++  .++++  +++..+++++..                     
T Consensus         9 ~~~~~~~~~Lis~~a~----~~D~~G~TpLh~Aa~~g~--~eiv~--~Ll~~ga~~n~~---------------------   59 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF----KADVHGHSALYYAIADNN--VRLVC--TLLNAGALKNLL---------------------   59 (284)
T ss_pred             cCHHHHHHHHHhCCCC----CCCCCCCcHHHHHHHcCC--HHHHH--HHHHCcCCCcCC---------------------
Confidence            4677899999998875    468889999999999887  66655  455555555432                     


Q ss_pred             hCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHhCCCCCCcc
Q 001436          612 MRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCIL  691 (1078)
Q Consensus       612 ~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~  691 (1078)
                                 .+.||||+|+..++  .++++.|+..+++++..+..+  .+++|.++..+ ...++++|++.|++++.+
T Consensus        60 -----------d~~TpLh~Aa~~g~--~eiV~lLL~~Gadvn~~d~~G--~TpLh~Aa~~g-~~eivk~Ll~~gadin~~  123 (284)
T PHA02791         60 -----------ENEFPLHQAATLED--TKIVKILLFSGMDDSQFDDKG--NTALYYAVDSG-NMQTVKLFVKKNWRLMFY  123 (284)
T ss_pred             -----------CCCCHHHHHHHCCC--HHHHHHHHHCCCCCCCCCCCC--CCHHHHHHHcC-CHHHHHHHHHCCCCcCcc
Confidence                       23577788888888  488888888888887766543  57787777654 567889999999999999


Q ss_pred             CCCCC-cHHHHHHHcCCHHHHHHHHhCCCCccccC-CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCC
Q 001436          692 DDEGQ-GVLHLAASLGYDWAIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRT  769 (1078)
Q Consensus       692 d~~G~-TpLH~Aa~~G~~~iv~~LL~~Gadin~~D-~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~T  769 (1078)
                      +..|+ ||||+|+..|+.++|++|+++|.+.  .| ..|+||||+|+..|+.++|++||++||+++.      +|..|.|
T Consensus       124 ~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~------~d~~g~t  195 (284)
T PHA02791        124 GKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNT------NNSLLFI  195 (284)
T ss_pred             CCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCc------ccCCCCC
Confidence            88885 8999999999999999999987643  23 3589999999999999999999999999887      4568887


Q ss_pred             H-HHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHHHHHHHHHHccCC
Q 001436          770 P-SDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTAT  826 (1078)
Q Consensus       770 P-LhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~~~v~~Lle~ga~  826 (1078)
                      | ||+|+..|+.+++++|+++|++     +|.+|. +.+++  ...+.++.|++.-++
T Consensus       196 ~~L~~Aa~~~~~e~v~lLl~~Ga~-----in~~~~-~~~~l--~~~e~~~~ll~~~~~  245 (284)
T PHA02791        196 PDIKLAIDNKDLEMLQALFKYDIN-----IYSVNL-ENVLL--DDAEIAKMIIEKHVE  245 (284)
T ss_pred             hHHHHHHHcCCHHHHHHHHHCCCC-----CccCcc-cCccC--CCHHHHHHHHHhhhh
Confidence            7 9999999999999999999965     788887 44655  455688899888775

>PHA02917 ankyrin-like protein; Provisional

Probab=99.94  E-value=2e-25  Score=274.37  Aligned_cols=303  Identities=14%  Similarity=0.068  Sum_probs=218.8

Q ss_pred             ccchhhhh---cCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhh--hhhccCCCCCCcccCCCCCCcc
Q 001436          524 AKCKWSCM---FAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVRE--FDYIVGSVKDADISDIYGSSTS  598 (1078)
Q Consensus       524 ~~~~~Ac~---fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~--feyll~~gadvn~~d~~G~~~t  598 (1078)
                      ++++|||.   +|+.++++.||+.|+.  ....+..|+||||+|+..|+  .+++.  +++++..+..+|..+.    .+
T Consensus        34 t~Lh~a~~~~~~~~~~~v~~Ll~~ga~--v~~~~~~g~TpL~~Aa~~g~--~~v~~~~~~~Ll~~~~~~n~~~~----~~  105 (661)
T PHA02917         34 NALHAYLFNEHCNNVEVVKLLLDSGTN--PLHKNWRQLTPLEEYTNSRH--VKVNKDIAMALLEATGYSNINDF----NI  105 (661)
T ss_pred             cHHHHHHHhhhcCcHHHHHHHHHCCCC--ccccCCCCCCHHHHHHHcCC--hhHHHHHHHHHHhccCCCCCCCc----ch
Confidence            44668655   5889999999999998  56778899999999998886  33321  2355544333454432    12


Q ss_pred             HHHH-----HHHHHHHHHhCCCCCcCCccCcccHHHHHHH--hccchhHHHHHHHhhcCCCCCcCcccc-----------
Q 001436          599 ESFL-----HLRLERILSMRSSPQNHLSEGLCEKQKLISK--IIQLKEEEESYQMVEANPEKNLSQHVE-----------  660 (1078)
Q Consensus       599 ~Lhl-----~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak--~~~l~~~~~~~LL~~~ad~n~~s~~~~-----------  660 (1078)
                      +++.     +.+++++|+..|++.+..+..|.|+||+++.  .++  .++++.|++.|++++..+..+.           
T Consensus       106 ~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~--~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~  183 (661)
T PHA02917        106 FSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPV--PEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPR  183 (661)
T ss_pred             HHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCC--HHHHHHHHHcCCCcccccccccccccccccccc
Confidence            3332     6799999999999999999999999996554  456  5999999999998875432211           


Q ss_pred             -cchHHHHHHHH----------cCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCH--HHHHHHHhCCCCcc----c
Q 001436          661 -KYQILQKIMKE----------KLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYD--WAIKPTVTAGVSIN----F  723 (1078)
Q Consensus       661 -~~t~L~~aa~~----------~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~--~iv~~LL~~Gadin----~  723 (1078)
                       ..+++|.++..          .++..++++|++.|+++|.+|..|.||||+|+..|+.  ++|++|+. |++++    .
T Consensus       184 ~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~  262 (661)
T PHA02917        184 NCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYI  262 (661)
T ss_pred             ccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccc
Confidence             13888888752          3467899999999999999999999999999999985  78998874 87765    3


Q ss_pred             cCCCCchHHHHHHH----------------------------------------------------------------cC
Q 001436          724 RDLSGWTALHWAAY----------------------------------------------------------------CG  739 (1078)
Q Consensus       724 ~D~~G~TpLH~Aa~----------------------------------------------------------------~G  739 (1078)
                      .|..|.||+|+|++                                                                .|
T Consensus       263 ~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g  342 (661)
T PHA02917        263 DDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFG  342 (661)
T ss_pred             cCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcC
Confidence            45567777777663                                                                12


Q ss_pred             C--HHHHHHHHHcCCCCCCCC------------------------CCCCCCCCCCCHHHHHHhcC---------------
Q 001436          740 R--EKTVAVLLSLGAAPGLLT------------------------DPSPEFPLSRTPSDLASSNG---------------  778 (1078)
Q Consensus       740 ~--~eiV~~LL~~GAdvn~~~------------------------d~~~~D~~G~TPLhlAa~~G---------------  778 (1078)
                      .  .++|++||++||++|..+                        ++..++.+|.||||.|++.+               
T Consensus       343 ~~~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~  422 (661)
T PHA02917        343 DIDIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGL  422 (661)
T ss_pred             CCcHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhcc
Confidence            1  236677777777766532                        12234556888888876432               


Q ss_pred             --------cHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH----HHHHHHHHHccCCCCCCCCCcchhcccchHHHH
Q 001436          779 --------HKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDESDVLSLKDSLTAI  846 (1078)
Q Consensus       779 --------~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~----~~~v~~Lle~ga~~~~~~~~e~~lslkdsltAl  846 (1078)
                              ..+++++|+.+|+     ++|.+|..|.||+|.|.    .+.++.|++.|++++..+        ..+.|++
T Consensus       423 ~~~~~~~~~~~~v~~Ll~~GA-----dIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d--------~~G~T~L  489 (661)
T PHA02917        423 CDMSYACPILSTINICLPYLK-----DINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRS--------NNGYTCI  489 (661)
T ss_pred             chhhhhhhhHHHHHHHHHCCC-----CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCC--------CCCCCHH
Confidence                    2456788888884     48888888888888876    467788888888877544        4567777


Q ss_pred             HHHH
Q 001436          847 CNAT  850 (1078)
Q Consensus       847 ~~Aa  850 (1078)
                      +.|.
T Consensus       490 ~~A~  493 (661)
T PHA02917        490 AIAI  493 (661)
T ss_pred             HHHH
Confidence            7775

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.94  E-value=1.6e-25  Score=268.35  Aligned_cols=244  Identities=11%  Similarity=0.044  Sum_probs=202.8

Q ss_pred             CCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcc----cchhhhhhccCCCCCCcccCCCCCCccHHHH------
Q 001436          533 AEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLAC----SEVREFDYIVGSVKDADISDIYGSSTSESFL------  602 (1078)
Q Consensus       533 G~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~c----seVv~feyll~~gadvn~~d~~G~~~t~Lhl------  602 (1078)
                      |+.++++.||+.|++  .+..+ .|.||||.|+.++..+    .+++  ++++..|+++|..|..|  .||||.      
T Consensus        48 ~~~~iv~~Ll~~GAd--vn~~~-~~~tpL~~a~~~~~~~~~~~~~iv--~~Ll~~Gadin~~d~~g--~tpL~~a~~~~~  120 (494)
T PHA02989         48 VKIKIVKLLIDNGAD--VNYKG-YIETPLCAVLRNREITSNKIKKIV--KLLLKFGADINLKTFNG--VSPIVCFIYNSN  120 (494)
T ss_pred             CChHHHHHHHHcCCC--ccCCC-CCCCcHHHHHhccCcchhhHHHHH--HHHHHCCCCCCCCCCCC--CcHHHHHHHhcc
Confidence            478999999999998  44333 5799999998876422    2344  48889999999999988  999985      


Q ss_pred             --HHHHHHHHHhCCCCC-cCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHc---CHHH
Q 001436          603 --HLRLERILSMRSSPQ-NHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEK---LYSW  676 (1078)
Q Consensus       603 --~~rlvkLLl~~g~~~-~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~---~~~~  676 (1078)
                        +.+++++|+..|++. ...+..|.||||+++.....-.++++.|++.|++++... +....+++|.++...   +...
T Consensus       121 ~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~-~~~g~tpL~~a~~~~~~~~~~~  199 (494)
T PHA02989        121 INNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKT-SLYGLTPMNIYLRNDIDVISIK  199 (494)
T ss_pred             cCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccc-cccCCChHHHHHhcccccccHH
Confidence              368999999999777 788899999999987654211589999999999988732 223457888776543   4678


Q ss_pred             HHHHHHhCCCCCCccCCCCCcHHHHHHHcC------CHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHc
Q 001436          677 LLRKVCEDGKGPCILDDEGQGVLHLAASLG------YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL  750 (1078)
Q Consensus       677 lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G------~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~  750 (1078)
                      ++++|++.|+++|.+|..|.||||.++..+      ...++++|+ .|+++|.+|..|+||||+|+..|+.++|++||+.
T Consensus       200 iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~-~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~  278 (494)
T PHA02989        200 VIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFIL-KYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKL  278 (494)
T ss_pred             HHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHH-hCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHc
Confidence            999999999999999999999999877654      456777655 5799999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCC
Q 001436          751 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSL  791 (1078)
Q Consensus       751 GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga  791 (1078)
                      ||+++.      +|..|.||||+|+..|+.+++++|++.+.
T Consensus       279 Gadin~------~d~~G~TpL~~A~~~~~~~iv~~LL~~~p  313 (494)
T PHA02989        279 GDDIYN------VSKDGDTVLTYAIKHGNIDMLNRILQLKP  313 (494)
T ss_pred             CCCccc------cCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence            999988      45799999999999999999999998764

>PHA02798 ankyrin-like protein; Provisional

Probab=99.93  E-value=2.7e-25  Score=266.16  Aligned_cols=249  Identities=13%  Similarity=0.066  Sum_probs=209.9

Q ss_pred             hhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhC-----CCcccchhhhhhccCCCCCCcccCCCCCCccHHHH--
Q 001436          530 CMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSN-----RLACSEVREFDYIVGSVKDADISDIYGSSTSESFL--  602 (1078)
Q Consensus       530 c~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~n-----g~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl--  602 (1078)
                      +-.++.++++.|++.|++  .+..+..|.||||+|+.+     +.  .++++  +++..|+++|..|..|  .||||+  
T Consensus        46 ~~~~~~~iv~~Ll~~Gad--vn~~d~~g~TpL~~~~~n~~~~~~~--~~iv~--~Ll~~GadiN~~d~~G--~TpLh~a~  117 (489)
T PHA02798         46 RDSPSTDIVKLFINLGAN--VNGLDNEYSTPLCTILSNIKDYKHM--LDIVK--ILIENGADINKKNSDG--ETPLYCLL  117 (489)
T ss_pred             CCCCCHHHHHHHHHCCCC--CCCCCCCCCChHHHHHHhHHhHHhH--HHHHH--HHHHCCCCCCCCCCCc--CcHHHHHH
Confidence            445688999999999998  777889999999999875     22  45555  7788999999999988  999987  


Q ss_pred             ------HHHHHHHHHhCCCCCcCCccCcccHHHHHHHhcc-chhHHHHHHHhhcCCCCCcCcccccchHHHHHHHH---c
Q 001436          603 ------HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQ-LKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKE---K  672 (1078)
Q Consensus       603 ------~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~-l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~---~  672 (1078)
                            +.+++++|+..|++.+..+..|.||+|+|+..+. ...++++.|++.|++++..+.. ...+++|.++..   .
T Consensus       118 ~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~-~~~t~Lh~~~~~~~~~  196 (489)
T PHA02798        118 SNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNK-EKYDTLHCYFKYNIDR  196 (489)
T ss_pred             HcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCc-CCCcHHHHHHHhcccc
Confidence                  3589999999999899999999999999999875 1138899999999988766422 235778777654   3


Q ss_pred             CHHHHHHHHHhCCCCCCccCCCCCcHHH-------HHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHH
Q 001436          673 LYSWLLRKVCEDGKGPCILDDEGQGVLH-------LAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVA  745 (1078)
Q Consensus       673 ~~~~lvk~Lle~Gad~n~~d~~G~TpLH-------~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~  745 (1078)
                      +...+++.|++.|++++..+..|.|+++       ++...+...++.+|+. |+++|.+|..|+||||+|+..|+.++++
T Consensus       197 ~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN~~d~~G~TPL~~A~~~~~~~~v~  275 (489)
T PHA02798        197 IDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDINQVDELGFNPLYYSVSHNNRKIFE  275 (489)
T ss_pred             CCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCCCcCcCCccHHHHHHHcCcHHHHH
Confidence            4677999999999999999999999987       2344567788888765 6999999999999999999999999999


Q ss_pred             HHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcc
Q 001436          746 VLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSL  794 (1078)
Q Consensus       746 ~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~  794 (1078)
                      +||+.||++|.+      |..|.||||+|+.+|+.++++.|++.+++.+
T Consensus       276 ~LL~~GAdin~~------d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~  318 (489)
T PHA02798        276 YLLQLGGDINII------TELGNTCLFTAFENESKFIFNSILNKKPNKN  318 (489)
T ss_pred             HHHHcCCccccc------CCCCCcHHHHHHHcCcHHHHHHHHccCCCHH
Confidence            999999999984      4799999999999999999999999997643

>PHA02791 ankyrin-like protein; Provisional

Probab=99.93  E-value=7.8e-25  Score=243.95  Aligned_cols=208  Identities=15%  Similarity=0.066  Sum_probs=180.6

Q ss_pred             HHHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHH
Q 001436          603 HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVC  682 (1078)
Q Consensus       603 ~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Ll  682 (1078)
                      ..+++++|+..+.  ...+..|.||||+|+..++  .++++.|++.+++.+..+    ..+++|.++. .+...++++|+
T Consensus        11 ~~~~~~~Lis~~a--~~~D~~G~TpLh~Aa~~g~--~eiv~~Ll~~ga~~n~~d----~~TpLh~Aa~-~g~~eiV~lLL   81 (284)
T PHA02791         11 SKQLKSFLSSKDA--FKADVHGHSALYYAIADNN--VRLVCTLLNAGALKNLLE----NEFPLHQAAT-LEDTKIVKILL   81 (284)
T ss_pred             HHHHHHHHHhCCC--CCCCCCCCcHHHHHHHcCC--HHHHHHHHHCcCCCcCCC----CCCHHHHHHH-CCCHHHHHHHH
Confidence            4578889998775  3467889999999999999  489999998888776543    2578877766 45677899999


Q ss_pred             hCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCc-hHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 001436          683 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGW-TALHWAAYCGREKTVAVLLSLGAAPGLLTDPS  761 (1078)
Q Consensus       683 e~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~-TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~  761 (1078)
                      +.|++++.+|..|+||||+||..|+.+++++|+++|++++.++..|+ ||||+|+..|+.++|++|+++|++..  +   
T Consensus        82 ~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~--d---  156 (284)
T PHA02791         82 FSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF--D---  156 (284)
T ss_pred             HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccc--c---
Confidence            99999999999999999999999999999999999999999999996 89999999999999999999876531  1   


Q ss_pred             CCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCCh-hHHhH----HHHHHHHHHccCCCCCCC
Q 001436          762 PEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGA-LEDSI----AKAVQTVSEKTATPANDN  831 (1078)
Q Consensus       762 ~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~ta-l~~a~----~~~v~~Lle~ga~~~~~~  831 (1078)
                        ...|.||||+|+.+|+.+++++|+++|++     ++.+|..|.|| +|.|+    .++++.|++.|+++++.+
T Consensus       157 --~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd-----~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~  224 (284)
T PHA02791        157 --LAILLSCIHITIKNGHVDMMILLLDYMTS-----TNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVN  224 (284)
T ss_pred             --cccCccHHHHHHHcCCHHHHHHHHHCCCC-----CCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCc
Confidence              02589999999999999999999999964     88899989987 88876    689999999999998866

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.93  E-value=1.8e-25  Score=263.39  Aligned_cols=269  Identities=16%  Similarity=0.112  Sum_probs=224.4

Q ss_pred             ccchhhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHH-
Q 001436          524 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-  602 (1078)
Q Consensus       524 ~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl-  602 (1078)
                      ++.++|++.|.++++..|++.|++  .+..+..|.||||+||..++  .|...  .++..++++--.|.+|  ..|+|- 
T Consensus       123 aplh~A~~~~~~s~L~~Ll~~~~d--vnl~de~~~TpLh~A~~~~~--~E~~k--~Li~~~a~~~K~~~~~--~~~iH~a  194 (929)
T KOG0510|consen  123 APLHLAADSGNYSCLKLLLDYGAD--VNLEDENGFTPLHLAARKNK--VEAKK--ELINKGADPCKSDIDG--NFPIHEA  194 (929)
T ss_pred             CchhhccccchHHHHHHHHHhcCC--ccccccCCCchhhHHHhcCh--HHHHH--HHHhcCCCCCcccCcC--CchHHHH
Confidence            456799999999999999999988  77788999999999999888  66545  5677788888888887  777776 


Q ss_pred             ----HHHHHHHHHh-----CCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcC-------------cccc
Q 001436          603 ----HLRLERILSM-----RSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLS-------------QHVE  660 (1078)
Q Consensus       603 ----~~rlvkLLl~-----~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s-------------~~~~  660 (1078)
                          ..++.++.+.     .+...+..++.+.+|||.|...+.+  +.++..++.+..+...-             .+..
T Consensus       195 a~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~--e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~d  272 (929)
T KOG0510|consen  195 ARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDI--EMLKMCLQNGKKIADVQLDAMQQEKELVNDEDND  272 (929)
T ss_pred             HHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCH--HHHHHHHhCccccchhhhHHHHHHHHHhhccccc
Confidence                5567777776     4477888899999999999999995  77777775554332211             1222


Q ss_pred             cchHHHHHHHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHh-CC-CCccccCCCCchHHHHHHHc
Q 001436          661 KYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT-AG-VSINFRDLSGWTALHWAAYC  738 (1078)
Q Consensus       661 ~~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~-~G-adin~~D~~G~TpLH~Aa~~  738 (1078)
                      +.+++|.++.+++. ..+..|+..|++++.+++++.||||.||..|+..+|+-||+ .| ..+|..|-.|.||||+|+..
T Consensus       273 g~tpLH~a~r~G~~-~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~  351 (929)
T KOG0510|consen  273 GCTPLHYAARQGGP-ESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKS  351 (929)
T ss_pred             CCchHHHHHHcCCh-hHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhc
Confidence            35888888876655 56899999999999999999999999999999999999998 55 46788999999999999999


Q ss_pred             CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHH
Q 001436          739 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALED  811 (1078)
Q Consensus       739 G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~  811 (1078)
                      ||.+++++||..||......   ..|.+|.||||+|+..|+..+|++|+.+|++     +..+|..|.+|+++
T Consensus       352 gH~~v~qlLl~~GA~~~~~~---e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~-----I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  352 GHDRVVQLLLNKGALFLNMS---EADSDGNTALHLAAKYGNTSAVQKLISHGAD-----IGVKNKKGKSAFDT  416 (929)
T ss_pred             CHHHHHHHHHhcChhhhccc---ccccCCchhhhHHHHhccHHHHHHHHHcCCc-----eeeccccccccccc
Confidence            99999999999999887422   2478999999999999999999999999965     88889888888773

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.93  E-value=3.3e-25  Score=275.87  Aligned_cols=270  Identities=16%  Similarity=0.119  Sum_probs=232.2

Q ss_pred             cchhhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHH--
Q 001436          525 KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL--  602 (1078)
Q Consensus       525 ~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl--  602 (1078)
                      ....+|..|.++++..++..|..  .+.....|.||||+|+..++  ..+++  .+...+++++..+..|  .|++|+  
T Consensus       377 pl~la~~~g~~~~v~Lll~~ga~--~~~~gk~gvTplh~aa~~~~--~~~v~--l~l~~gA~~~~~~~lG--~T~lhvaa  448 (1143)
T KOG4177|consen  377 PLHLAVKSGRVSVVELLLEAGAD--PNSAGKNGVTPLHVAAHYGN--PRVVK--LLLKRGASPNAKAKLG--YTPLHVAA  448 (1143)
T ss_pred             chhhhcccCchhHHHhhhhccCC--cccCCCCCcceeeehhhccC--cceEE--EEeccCCChhhHhhcC--CChhhhhh
Confidence            45689999999999999999999  77788999999999998777  55665  6667889999999999  999988  


Q ss_pred             ----HHHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHH
Q 001436          603 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLL  678 (1078)
Q Consensus       603 ----~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv  678 (1078)
                          +.+++.+++..+.+.+.....|.|+||+++..++  .+.+..|++.++..+....  ..-+++|.+. ..+...++
T Consensus       449 ~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh--~~~~~llle~~~~~~~~~~--~~l~~lhla~-~~~~v~~~  523 (1143)
T KOG4177|consen  449 KKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGH--TEVVQLLLEGGANDNLDAK--KGLTPLHLAA-DEDTVKVA  523 (1143)
T ss_pred             hcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCC--chHHHHhhhcCCccCccch--hccchhhhhh-hhhhHHHH
Confidence                4667778888889999999999999999999999  5888888855544444433  2235555554 45566788


Q ss_pred             HHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 001436          679 RKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT  758 (1078)
Q Consensus       679 k~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~  758 (1078)
                      +.+++.|++++.++..|.||||.||..|+..+|++||++|++++.+|+.|+||||.||..|+.+|+.+|+++||++|+  
T Consensus       524 ~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna--  601 (1143)
T KOG4177|consen  524 KILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNA--  601 (1143)
T ss_pred             HHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCc--
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999998  


Q ss_pred             CCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH
Q 001436          759 DPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI  813 (1078)
Q Consensus       759 d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~  813 (1078)
                          .|.+|.||||+|+..|+.+++++|+..+.++...+....+..|.+|.....
T Consensus       602 ----~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e  652 (1143)
T KOG4177|consen  602 ----ADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAE  652 (1143)
T ss_pred             ----ccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHHH
Confidence                458999999999999999999999999988655556667778889877654

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.92  E-value=5.3e-24  Score=249.16  Aligned_cols=238  Identities=16%  Similarity=0.084  Sum_probs=191.4

Q ss_pred             CCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHHHHHHHHHHHhCCCCCcCCccCcccHHHHHHHhcc
Q 001436          557 GRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQ  636 (1078)
Q Consensus       557 G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~  636 (1078)
                      ++++||.|+..|+  .+++.  +++..|+++|..+.                              .|.||||+|+..++
T Consensus         2 ~~~~L~~A~~~g~--~~iv~--~Ll~~g~~~n~~~~------------------------------~g~tpL~~A~~~~~   47 (413)
T PHA02875          2 DQVALCDAILFGE--LDIAR--RLLDIGINPNFEIY------------------------------DGISPIKLAMKFRD   47 (413)
T ss_pred             CchHHHHHHHhCC--HHHHH--HHHHCCCCCCccCC------------------------------CCCCHHHHHHHcCC
Confidence            4678888888877  55544  55555666655443                              45788888998888


Q ss_pred             chhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHhCCCCCC-ccCCCCCcHHHHHHHcCCHHHHHHHH
Q 001436          637 LKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPC-ILDDEGQGVLHLAASLGYDWAIKPTV  715 (1078)
Q Consensus       637 l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~Gad~n-~~d~~G~TpLH~Aa~~G~~~iv~~LL  715 (1078)
                        .+.++.|++.+++.+.....  ..+++|.++.. +...+++.|++.|++++ ..+..|.||||+|+..|+.+++++|+
T Consensus        48 --~~~v~~Ll~~ga~~~~~~~~--~~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll  122 (413)
T PHA02875         48 --SEAIKLLMKHGAIPDVKYPD--IESELHDAVEE-GDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLI  122 (413)
T ss_pred             --HHHHHHHHhCCCCccccCCC--cccHHHHHHHC-CCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHH
Confidence              48999999888877665433  35788877765 45677899999998764 45778999999999999999999999


Q ss_pred             hCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCccc
Q 001436          716 TAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLL  795 (1078)
Q Consensus       716 ~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~  795 (1078)
                      ++|++++.++..|+||||+|+..|+.+++++|+++|++++.      +|..|.||||+|+..|+.+++++|+++|++   
T Consensus       123 ~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~---  193 (413)
T PHA02875        123 ARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDI------EDCCGCTPLIIAMAKGDIAICKMLLDSGAN---  193 (413)
T ss_pred             hCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHhCCCC---
Confidence            99999999999999999999999999999999999999887      557999999999999999999999999965   


Q ss_pred             ccCccCCCCCC-ChhHHhH----HHHHHHHHHccCCCCCCCCCcchhcccchHHHHHHH
Q 001436          796 LSLKMNDSADD-GALEDSI----AKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNA  849 (1078)
Q Consensus       796 adln~kd~~g~-tal~~a~----~~~v~~Lle~ga~~~~~~~~e~~lslkdsltAl~~A  849 (1078)
                        ++..+..|. +|++.|.    .+.++.|+++|++++...     ....++.+++...
T Consensus       194 --~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~-----~~~~~~~t~l~~~  245 (413)
T PHA02875        194 --IDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMF-----MIEGEECTILDMI  245 (413)
T ss_pred             --CCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHh-----hcCCCchHHHHHH
Confidence              777777775 6667555    589999999999977532     1223455666544

>PHA02798 ankyrin-like protein; Provisional

Probab=99.92  E-value=7.5e-24  Score=253.77  Aligned_cols=272  Identities=11%  Similarity=0.013  Sum_probs=222.1

Q ss_pred             chHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHH----------HH
Q 001436          535 VEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL----------HL  604 (1078)
Q Consensus       535 veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl----------~~  604 (1078)
                      +++++.|+..+..    .....|.|+++.+........++++  +++.+|+++|..|..|  .||||.          +.
T Consensus        18 ~~~v~~ll~~~~~----~~~~~~~~~~~~yl~~~~~~~~iv~--~Ll~~Gadvn~~d~~g--~TpL~~~~~n~~~~~~~~   89 (489)
T PHA02798         18 LSTVKLLIKSCNP----NEIVNEYSIFQKYLQRDSPSTDIVK--LFINLGANVNGLDNEY--STPLCTILSNIKDYKHML   89 (489)
T ss_pred             HHHHHHHHhcCCh----hhhcccchHHHHHHhCCCCCHHHHH--HHHHCCCCCCCCCCCC--CChHHHHHHhHHhHHhHH
Confidence            4799999976543    1124577888766554442355555  7888999999999888  899976          26


Q ss_pred             HHHHHHHhCCCCCcCCccCcccHHHHHHHhccc-hhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcC--HHHHHHHH
Q 001436          605 RLERILSMRSSPQNHLSEGLCEKQKLISKIIQL-KEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKL--YSWLLRKV  681 (1078)
Q Consensus       605 rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l-~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~--~~~lvk~L  681 (1078)
                      +++++|+..|++.+..+..|.||+|+|+..+.. ..+.++.|++.|++++..+..+  .+++|.++..+.  ...++++|
T Consensus        90 ~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g--~tpL~~a~~~~~~~~~~vv~~L  167 (489)
T PHA02798         90 DIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDG--FTMLQVYLQSNHHIDIEIIKLL  167 (489)
T ss_pred             HHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCC--CcHHHHHHHcCCcchHHHHHHH
Confidence            899999999988999999999999999986521 0488999999999998887655  588888887654  37889999


Q ss_pred             HhCCCCCCccC-CCCCcHHHHHHHc----CCHHHHHHHHhCCCCccccCCCCchHHH-------HHHHcCCHHHHHHHHH
Q 001436          682 CEDGKGPCILD-DEGQGVLHLAASL----GYDWAIKPTVTAGVSINFRDLSGWTALH-------WAAYCGREKTVAVLLS  749 (1078)
Q Consensus       682 le~Gad~n~~d-~~G~TpLH~Aa~~----G~~~iv~~LL~~Gadin~~D~~G~TpLH-------~Aa~~G~~eiV~~LL~  749 (1078)
                      ++.|++++..+ ..|.||||.++..    ++.+++++|+++|++++..|..|.|+++       ++...++.+++.+|+.
T Consensus       168 l~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~  247 (489)
T PHA02798        168 LEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS  247 (489)
T ss_pred             HHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh
Confidence            99999999885 5799999998765    4789999999999999999999999987       3455677888888776


Q ss_pred             cCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHH----HHHHHHHHccC
Q 001436          750 LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA----KAVQTVSEKTA  825 (1078)
Q Consensus       750 ~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~----~~v~~Lle~ga  825 (1078)
                       |+++|.      +|..|.||||+|+..|+.+++++|++.|+     +++.+|..|.||++.|..    ..++.|++.++
T Consensus       248 -~~dvN~------~d~~G~TPL~~A~~~~~~~~v~~LL~~GA-----din~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~  315 (489)
T PHA02798        248 -YIDINQ------VDELGFNPLYYSVSHNNRKIFEYLLQLGG-----DINIITELGNTCLFTAFENESKFIFNSILNKKP  315 (489)
T ss_pred             -cCCCCC------cCcCCccHHHHHHHcCcHHHHHHHHHcCC-----cccccCCCCCcHHHHHHHcCcHHHHHHHHccCC
Confidence             688877      56799999999999999999999999995     489999999999999874    66777888877


Q ss_pred             CCC
Q 001436          826 TPA  828 (1078)
Q Consensus       826 ~~~  828 (1078)
                      ++.
T Consensus       316 ~~~  318 (489)
T PHA02798        316 NKN  318 (489)
T ss_pred             CHH
Confidence            644

>PHA02730 ankyrin-like protein; Provisional

Probab=99.92  E-value=6.7e-24  Score=256.01  Aligned_cols=281  Identities=13%  Similarity=0.002  Sum_probs=196.5

Q ss_pred             hhhh--cCCchHHHHHHHCC-CCccCCCC---CCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcc-------cCCCC
Q 001436          528 WSCM--FAEVEVPAEVLADG-VLCCRIPP---HAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADI-------SDIYG  594 (1078)
Q Consensus       528 ~Ac~--fG~veVv~~LLq~G-v~rC~~p~---~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~-------~d~~G  594 (1078)
                      .+|.  .|+.++++.|+..| .+...+..   +..|.+|+|+|..+++  .+|++  +++.+|++++-       .+...
T Consensus       120 ~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~--~eIvk--lLi~~g~~v~g~~~~~~~~~~~~  195 (672)
T PHA02730        120 SYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPR--PEVLL--WLLKSECYSTGYVFRSCMYDSDR  195 (672)
T ss_pred             HHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCc--hHHHH--HHHHcCCcccccccccccccCCc
Confidence            4444  66667777777533 33111111   1356777777777776  66665  55666666641       12222


Q ss_pred             CCccHHHH-----------HHHHHHHHHhCCCCCcCCccCcccHHHHHHH--hccchhHHHHHHHh--------------
Q 001436          595 SSTSESFL-----------HLRLERILSMRSSPQNHLSEGLCEKQKLISK--IIQLKEEEESYQMV--------------  647 (1078)
Q Consensus       595 ~~~t~Lhl-----------~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak--~~~l~~~~~~~LL~--------------  647 (1078)
                       ..+.||+           ..+++++|+..|++.+..+..|.||||++..  .++  .++++.|++              
T Consensus       196 -c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~--~eiv~~Li~~~~~~~~~~~~~~~  272 (672)
T PHA02730        196 -CKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTID--IEIVKLLIKDVDTCSVYDDISQP  272 (672)
T ss_pred             -cchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCccc--HHHHHHHHhccccccccccccch
Confidence             2344442           4567777777777777777777777775322  223  366666664              


Q ss_pred             ------------------hcCCCCC--------------------cCccc-------------------ccchHHHHHHH
Q 001436          648 ------------------EANPEKN--------------------LSQHV-------------------EKYQILQKIMK  670 (1078)
Q Consensus       648 ------------------~~ad~n~--------------------~s~~~-------------------~~~t~L~~aa~  670 (1078)
                                        ++++...                    .+..+                   .....|+....
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~  352 (672)
T PHA02730        273 YIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLH  352 (672)
T ss_pred             hhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHh
Confidence                              2333311                    11111                   01125666666


Q ss_pred             Hc--CHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCC----HHHHHHHHhCCC--CccccCCCCchHHHH---HHHcC
Q 001436          671 EK--LYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGY----DWAIKPTVTAGV--SINFRDLSGWTALHW---AAYCG  739 (1078)
Q Consensus       671 ~~--~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~----~~iv~~LL~~Ga--din~~D~~G~TpLH~---Aa~~G  739 (1078)
                      .+  ....++++|+++||++|.. ..|.||||+|+..++    .+++++||++|+  ++|.+|..|.||||.   |...+
T Consensus       353 ~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n  431 (672)
T PHA02730        353 YGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNN  431 (672)
T ss_pred             cCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhcc
Confidence            55  5788999999999999985 799999999998875    899999999998  699999999999994   33332


Q ss_pred             ---------CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCC-CCCChh
Q 001436          740 ---------REKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDS-ADDGAL  809 (1078)
Q Consensus       740 ---------~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~-~g~tal  809 (1078)
                               ..+++++|+.+||++|+      +|..|.||||+|+..++.+++++|+++|++     +|.+|. .|.||+
T Consensus       432 ~~~~~~e~~~~~ivk~LIs~GADINa------kD~~G~TPLh~Aa~~~~~eive~LI~~GAd-----IN~~d~~~g~TaL  500 (672)
T PHA02730        432 CGYHCYETILIDVFDILSKYMDDIDM------IDNENKTLLYYAVDVNNIQFARRLLEYGAS-----VNTTSRSIINTAI  500 (672)
T ss_pred             ccccccchhHHHHHHHHHhcccchhc------cCCCCCCHHHHHHHhCCHHHHHHHHHCCCC-----CCCCCCcCCcCHH
Confidence                     23569999999999998      567999999999999999999999999964     888986 589999


Q ss_pred             HHhHH------HHHHHHHHccCCC
Q 001436          810 EDSIA------KAVQTVSEKTATP  827 (1078)
Q Consensus       810 ~~a~~------~~v~~Lle~ga~~  827 (1078)
                      +.++.      +.++.|++.|++.
T Consensus       501 ~~Aa~~~~~~~eIv~~LLs~ga~i  524 (672)
T PHA02730        501 QKSSYRRENKTKLVDLLLSYHPTL  524 (672)
T ss_pred             HHHHHhhcCcHHHHHHHHHcCCCH
Confidence            99864      4899999999863

>PHA02917 ankyrin-like protein; Provisional

Probab=99.92  E-value=1.3e-23  Score=258.34  Aligned_cols=139  Identities=12%  Similarity=-0.045  Sum_probs=115.6

Q ss_pred             HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCccccCCCCchHHHHHHHcC--------------
Q 001436          675 SWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT-AGVSINFRDLSGWTALHWAAYCG--------------  739 (1078)
Q Consensus       675 ~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~-~Gadin~~D~~G~TpLH~Aa~~G--------------  739 (1078)
                      ..++++|++.|+++|.++..|.|+.    .....++++.||. .|++++..+..|+||||.||..+              
T Consensus       346 ~~~v~~Ll~~GAdvn~~~~~g~~~~----~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~  421 (661)
T PHA02917        346 IPLVECMLEYGAVVNKEAIHGYFRN----INIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKG  421 (661)
T ss_pred             HHHHHHHHHcCCCCCCCCccccchh----hcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhc
Confidence            4478888888888888888887754    3556667777776 58887777778999999997533              


Q ss_pred             ---------CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhH
Q 001436          740 ---------REKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALE  810 (1078)
Q Consensus       740 ---------~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~  810 (1078)
                               ..+++++|+.+||++|.      +|..|.||||+|+..++.+++++|+++|+     +++.+|..|.||++
T Consensus       422 ~~~~~~~~~~~~~v~~Ll~~GAdIN~------kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GA-----din~~d~~G~T~L~  490 (661)
T PHA02917        422 LCDMSYACPILSTINICLPYLKDINM------IDKRGETLLHKAVRYNKQSLVSLLLESGS-----DVNIRSNNGYTCIA  490 (661)
T ss_pred             cchhhhhhhhHHHHHHHHHCCCCCCC------CCCCCcCHHHHHHHcCCHHHHHHHHHCcC-----CCCCCCCCCCCHHH
Confidence                     35678999999999988      56799999999999999999999999995     48999999999999


Q ss_pred             HhH-----HHHHHHHHHccCCCC
Q 001436          811 DSI-----AKAVQTVSEKTATPA  828 (1078)
Q Consensus       811 ~a~-----~~~v~~Lle~ga~~~  828 (1078)
                      ++.     ...++.|+..++++.
T Consensus       491 ~A~~~~~~~~iv~~LL~~ga~i~  513 (661)
T PHA02917        491 IAINESRNIELLKMLLCHKPTLD  513 (661)
T ss_pred             HHHHhCCCHHHHHHHHHcCCChh
Confidence            986     467888999998754

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.92  E-value=6.8e-25  Score=273.06  Aligned_cols=317  Identities=19%  Similarity=0.180  Sum_probs=264.0

Q ss_pred             cccchhhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHH
Q 001436          523 VAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL  602 (1078)
Q Consensus       523 ~~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl  602 (1078)
                      .+..++++.+|+.++...+...+..  ....++.|.||+|+||..+.  .++++  +++..|+++|.....|  +||+|+
T Consensus       342 ~t~lHlaa~~~~~~~~~~l~~~~~~--~~~a~~k~~~pl~la~~~g~--~~~v~--Lll~~ga~~~~~gk~g--vTplh~  413 (1143)
T KOG4177|consen  342 YTPLHLAAKEGQVEVAGALLEHGAQ--RRQAEEKGFTPLHLAVKSGR--VSVVE--LLLEAGADPNSAGKNG--VTPLHV  413 (1143)
T ss_pred             cccccHhhhhhhHHHHHHhhccccc--cCcccccCCcchhhhcccCc--hhHHH--hhhhccCCcccCCCCC--cceeee
Confidence            4557788999999977777776655  66678999999999998888  66666  7778888888887777  999998


Q ss_pred             -----HHHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHH
Q 001436          603 -----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWL  677 (1078)
Q Consensus       603 -----~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~l  677 (1078)
                           +.+++++++..++..+.....|.|++|++++.+.. .+....++..+.+.+..+..+.  +++|.++ ..++..+
T Consensus       414 aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~-~~~~~~l~~~g~~~n~~s~~G~--T~Lhlaa-q~Gh~~~  489 (1143)
T KOG4177|consen  414 AAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRY-LQIARLLLQYGADPNAVSKQGF--TPLHLAA-QEGHTEV  489 (1143)
T ss_pred             hhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccH-hhhhhhHhhcCCCcchhccccC--cchhhhh-ccCCchH
Confidence                 66888999999988899999999999999999833 4666777778999999987664  5665555 4567778


Q ss_pred             HHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 001436          678 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLL  757 (1078)
Q Consensus       678 vk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~  757 (1078)
                      ++.|++.++..+...+.|.|+||+|+..++..+++.++++|++++.++..|.||||.||.+|+..+|++||++||++++ 
T Consensus       490 ~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~a-  568 (1143)
T KOG4177|consen  490 VQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNA-  568 (1143)
T ss_pred             HHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccc-
Confidence            8999999999998899999999999999999999999999999999999999999999999999999999999999998 


Q ss_pred             CCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH----HHHHHHHHHccCCCCCCCCC
Q 001436          758 TDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDE  833 (1078)
Q Consensus       758 ~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~----~~~v~~Lle~ga~~~~~~~~  833 (1078)
                           +|+.|+||||.||..|+.+|+.+|+++|+.     +|..|..|.||++++.    ...++.|...++++.+ .  
T Consensus       569 -----k~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~-----vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~-~--  635 (1143)
T KOG4177|consen  569 -----KDKLGYTPLHQAAQQGHNDIAELLLKHGAS-----VNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAA-T--  635 (1143)
T ss_pred             -----cCCCCCChhhHHHHcChHHHHHHHHHcCCC-----CCcccccCcchhHHHHHhcccchhhHHHhccCcccc-c--
Confidence                 558999999999999999999999999964     8899999999999977    4567777777776421 1  


Q ss_pred             cchhcccchHHHHHHHHHHhHHHHHHHhhhhH
Q 001436          834 SDVLSLKDSLTAICNATQAADRIHQIFRMQSF  865 (1078)
Q Consensus       834 e~~lslkdsltAl~~AaqaAarIq~afR~~s~  865 (1078)
                      ........+.++...+......++..++...-
T Consensus       636 ~~~~e~~~g~~p~~v~e~~~~~~~~~i~~~~~  667 (1143)
T KOG4177|consen  636 DPVKENRKGAVPEDVAEELDTDRQDLIRGKLQ  667 (1143)
T ss_pred             cchhhhhcccChhhHHHHhhhhhhhhhccchH
Confidence            23445566777777777766666665555433

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.92  E-value=8e-25  Score=254.69  Aligned_cols=206  Identities=23%  Similarity=0.268  Sum_probs=175.2

Q ss_pred             hhhhhcCCchHHHHHHHC-CCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHHHHH
Q 001436          527 KWSCMFAEVEVPAEVLAD-GVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLR  605 (1078)
Q Consensus       527 ~~Ac~fG~veVv~~LLq~-Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl~~r  605 (1078)
                      -.||..|+++.+++|++. |..  .+.++.+|.|+||+||.|+.  .+|+.  |++++|+++|..+-..           
T Consensus        49 v~A~q~G~l~~v~~lve~~g~~--v~~~D~~g~tlLHWAAiNNr--l~v~r--~li~~gadvn~~gG~l-----------  111 (600)
T KOG0509|consen   49 VKATQYGELETVKELVESEGES--VNNPDREGVTLLHWAAINNR--LDVAR--YLISHGADVNAIGGVL-----------  111 (600)
T ss_pred             hhHhhcchHHHHHHHHhhcCcC--CCCCCcCCccceeHHHHcCc--HHHHH--HHHHcCCCccccCCCC-----------
Confidence            468999999999999998 766  78889999999999999988  66666  6677777777653221           


Q ss_pred             HHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHhCC
Q 001436          606 LERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDG  685 (1078)
Q Consensus       606 lvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~G  685 (1078)
                                        +.                                     +|+|.|+. +++..++.+|+++|
T Consensus       112 ------------------~s-------------------------------------tPLHWAar-~G~~~vv~lLlqhG  135 (600)
T KOG0509|consen  112 ------------------GS-------------------------------------TPLHWAAR-NGHISVVDLLLQHG  135 (600)
T ss_pred             ------------------CC-------------------------------------CcchHHHH-cCcHHHHHHHHHcC
Confidence                              12                                     34443333 33455788999999


Q ss_pred             CCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCC
Q 001436          686 KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFP  765 (1078)
Q Consensus       686 ad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~  765 (1078)
                      |||+.+|.+|.||||+||..|+.-+|-+||.+|+++|.+|.+|+|||||||..|+...+..||..|+.++..++     .
T Consensus       136 Adpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~-----~  210 (600)
T KOG0509|consen  136 ADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDD-----N  210 (600)
T ss_pred             CCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccccccc-----c
Confidence            99999999999999999999999999999999999999999999999999999999989999999999998654     8


Q ss_pred             CCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHHH
Q 001436          766 LSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAK  815 (1078)
Q Consensus       766 ~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~~  815 (1078)
                      .|.||||+|+..|+..++.+|++.|+     +.+..|.+|.||+.+|...
T Consensus       211 ~g~TpLHwa~~~gN~~~v~Ll~~g~~-----~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  211 HGNTPLHWAVVGGNLTAVKLLLEGGA-----DLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             cCCchHHHHHhcCCcceEehhhhcCC-----cccccccCCCCHHHHHHHh
Confidence            99999999999999999997766664     5888888899999998755

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.92  E-value=1.2e-24  Score=218.49  Aligned_cols=179  Identities=20%  Similarity=0.171  Sum_probs=150.7

Q ss_pred             HHHHHHHhhcC-CCCCcCcccccchHHHHHHHHcCHHHHHHHHH-hCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 001436          640 EEESYQMVEAN-PEKNLSQHVEKYQILQKIMKEKLYSWLLRKVC-EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTA  717 (1078)
Q Consensus       640 ~~~~~LL~~~a-d~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Ll-e~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~  717 (1078)
                      ..++.++.... ..+..+ +...+++||.+|. -++..++++|+ +.+..+|.+|..||||||.||..|+.++|+.|+.+
T Consensus        17 ~kveel~~s~~kSL~~r~-dqD~Rt~LHwa~S-~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r   94 (226)
T KOG4412|consen   17 FKVEELIQSDPKSLNARD-DQDGRTPLHWACS-FGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNR   94 (226)
T ss_pred             HHHHHHHhcChhhhhccc-cccCCceeeeeee-cCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcC
Confidence            44555653332 223332 3234677777765 45667888888 67889999999999999999999999999999998


Q ss_pred             -CCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccc
Q 001436          718 -GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLL  796 (1078)
Q Consensus       718 -Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~a  796 (1078)
                       |+++|..++.|.||||||+..|+.+|+++|++.|+.+++      +|..|.||||-|+..|...++++|+..|+     
T Consensus        95 ~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~------kD~~~qtplHRAAavGklkvie~Li~~~a-----  163 (226)
T KOG4412|consen   95 SGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRI------KDKQGQTPLHRAAAVGKLKVIEYLISQGA-----  163 (226)
T ss_pred             CCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcc------cccccCchhHHHHhccchhhHHHHHhcCC-----
Confidence             999999999999999999999999999999999999988      67899999999999999999999999995     


Q ss_pred             cCccCCCCCCChhHHhH----HHHHHHHHHccCCCCCCC
Q 001436          797 SLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDN  831 (1078)
Q Consensus       797 dln~kd~~g~tal~~a~----~~~v~~Lle~ga~~~~~~  831 (1078)
                      .+|..|+.|.||||.+-    .+...+|++.||+...++
T Consensus       164 ~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~ed  202 (226)
T KOG4412|consen  164 PLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDRED  202 (226)
T ss_pred             CCCcccccCccHHHHHHhccCchHHHHHHHhccceeecc
Confidence            49999999999999983    456678899998766544

>PHA02792 ankyrin-like protein; Provisional

Probab=99.89  E-value=6.2e-22  Score=236.86  Aligned_cols=277  Identities=8%  Similarity=-0.017  Sum_probs=190.4

Q ss_pred             hhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHh-CCCcccchhhhhhccCCCCCCc------------------
Q 001436          528 WSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCS-NRLACSEVREFDYIVGSVKDAD------------------  588 (1078)
Q Consensus       528 ~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~-ng~~cseVv~feyll~~gadvn------------------  588 (1078)
                      .|+..|++|++++||.+|++  .+..+..|.||||+|+. +++  .+|++  +++..|++++                  
T Consensus        78 ~~s~n~~lElvk~LI~~GAd--vN~~~n~~~~~l~ya~~~~~~--~eivk--~Ll~~Gad~~~~~~~g~~~~~~~~~~~~  151 (631)
T PHA02792         78 LCSDNIDIELLKLLISKGLE--INSIKNGINIVEKYATTSNPN--VDVFK--LLLDKGIPTCSNIQYGYKIIIEQITRAE  151 (631)
T ss_pred             HHHhcccHHHHHHHHHcCCC--cccccCCCCcceeEeecCCCC--hHHHH--HHHHCCCCcccccccCcchhhhhccccc
Confidence            45566666777777776666  44555556666666643 344  55555  4444455422                  


Q ss_pred             ------------------ccCCCCCCccHHHH----H--------HHHHHHHHhCCCCCcCCccCcccHHHHHHHhccch
Q 001436          589 ------------------ISDIYGSSTSESFL----H--------LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLK  638 (1078)
Q Consensus       589 ------------------~~d~~G~~~t~Lhl----~--------~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~  638 (1078)
                                        ..|..|  .||||+    +        .+++++|+..|+..+..+..|.||||++.....+-
T Consensus       152 ~~~~~~~~~~~~~~~~i~~~~~~g--~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~  229 (631)
T PHA02792        152 YYNWDDELDDYDYDYTTDYDDRMG--KTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIK  229 (631)
T ss_pred             ccchhhhccccccccccccCCCCC--CchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccch
Confidence                              222333  667766    3        56777777777666666667777777777766321


Q ss_pred             hHHHHHHHhhcCCCC--------------------CcC------------------------c-----------ccccch
Q 001436          639 EEEESYQMVEANPEK--------------------NLS------------------------Q-----------HVEKYQ  663 (1078)
Q Consensus       639 ~~~~~~LL~~~ad~n--------------------~~s------------------------~-----------~~~~~t  663 (1078)
                      .++++.|+. .....                    ..+                        .           ......
T Consensus       230 ~ei~~~L~~-~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~  308 (631)
T PHA02792        230 REIFDALFD-SNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQD  308 (631)
T ss_pred             HHHHHHHHh-ccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHH
Confidence            344444442 11100                    000                        0           000112


Q ss_pred             HHHHHHHHc-CHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCC--chHHHHHHHcCC
Q 001436          664 ILQKIMKEK-LYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSG--WTALHWAAYCGR  740 (1078)
Q Consensus       664 ~L~~aa~~~-~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G--~TpLH~Aa~~G~  740 (1078)
                      .||...... .+..++++|++.|++++ + ..+..++|.||..|+.++|++|+++||++|.+|..|  .||||+|+..+.
T Consensus       309 ~l~~Yl~~~~v~ieiIK~LId~Ga~~~-r-~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~  386 (631)
T PHA02792        309 LLSEYVSYHTVYINVIKCMIDEGATLY-R-FKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHE  386 (631)
T ss_pred             HHHHHHhcCCccHHHHHHHHHCCCccc-c-CCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhcc
Confidence            233333332 35678899999999875 2 235677999999999999999999999999999875  699999887766


Q ss_pred             HH---HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHH---
Q 001436          741 EK---TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA---  814 (1078)
Q Consensus       741 ~e---iV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~---  814 (1078)
                      .+   ++++|+++||++|.      +|..|.||||+|+..++.+++++|+++|+     +++.+|..|.||+++|..   
T Consensus       387 ~~v~~IlklLIs~GADIN~------kD~~G~TPLh~Aa~~~n~eivelLLs~GA-----DIN~kD~~G~TpL~~A~~~~~  455 (631)
T PHA02792        387 SDVLSILKLCKPYIDDINK------IDKHGRSILYYCIESHSVSLVEWLIDNGA-----DINITTKYGSTCIGICVILAH  455 (631)
T ss_pred             HhHHHHHHHHHhcCCcccc------ccccCcchHHHHHHcCCHHHHHHHHHCCC-----CCCCcCCCCCCHHHHHHHHHh
Confidence            54   58899999999988      56799999999999999999999999995     489999999999999753   


Q ss_pred             -----------HHHHHHHHccCC
Q 001436          815 -----------KAVQTVSEKTAT  826 (1078)
Q Consensus       815 -----------~~v~~Lle~ga~  826 (1078)
                                 ..++.|++++.+
T Consensus       456 ~~~~~i~~~~~~il~lLLs~~p~  478 (631)
T PHA02792        456 ACIPEIAELYIKILEIILSKLPT  478 (631)
T ss_pred             cccHHHHHHHHHHHHHHHhcCCC
Confidence                       457777887765

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.87  E-value=2.6e-21  Score=206.96  Aligned_cols=177  Identities=14%  Similarity=0.045  Sum_probs=150.3

Q ss_pred             cCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHc-CHHHHHHHHHhCCCCCCccC-CCCCcHH
Q 001436          622 EGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEK-LYSWLLRKVCEDGKGPCILD-DEGQGVL  699 (1078)
Q Consensus       622 ~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~-~~~~lvk~Lle~Gad~n~~d-~~G~TpL  699 (1078)
                      ....+||+.|+..+++  +.++.|+..   .+..+.  ...+++|.++..+ +...++++|++.|+++|.++ ..|.|||
T Consensus        19 ~~~~~pL~~A~~~~~~--~~vk~Li~~---~n~~~~--~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpL   91 (209)
T PHA02859         19 YRYCNPLFYYVEKDDI--EGVKKWIKF---VNDCND--LYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSAL   91 (209)
T ss_pred             hccCcHHHHHHHhCcH--HHHHHHHHh---hhccCc--cCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHH
Confidence            4557899999999995  888888843   233333  3468998887654 46789999999999999997 5899999


Q ss_pred             HHHHHc---CCHHHHHHHHhCCCCccccCCCCchHHHHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH-
Q 001436          700 HLAASL---GYDWAIKPTVTAGVSINFRDLSGWTALHWAAY--CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDL-  773 (1078)
Q Consensus       700 H~Aa~~---G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~--~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhl-  773 (1078)
                      |+|+..   ++.+++++|+++|+++|.+|..|.||||+|+.  .++.+++++|++.|++++.      +|..|.||||. 
T Consensus        92 h~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~------~d~~g~t~Lh~~  165 (209)
T PHA02859         92 HHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLN------KDFDNNNILYSY  165 (209)
T ss_pred             HHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc------ccCCCCcHHHHH
Confidence            998764   47999999999999999999999999999976  4789999999999999987      56899999996 


Q ss_pred             HHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHHHH
Q 001436          774 ASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKA  816 (1078)
Q Consensus       774 Aa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~~~  816 (1078)
                      |+..++.+++++|+++|++     ++.+|..|.||+++|....
T Consensus       166 a~~~~~~~iv~~Ll~~Gad-----i~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        166 ILFHSDKKIFDFLTSLGID-----INETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHhcCCHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHhhhh
Confidence            5678899999999999965     8899999999999987543

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.87  E-value=5.4e-22  Score=231.22  Aligned_cols=204  Identities=22%  Similarity=0.145  Sum_probs=169.1

Q ss_pred             ccHHHHHHHhccchhHHHHHHHhh-cCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHhCCCCCCccC-CCCCcHHHHH
Q 001436          625 CEKQKLISKIIQLKEEEESYQMVE-ANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILD-DEGQGVLHLA  702 (1078)
Q Consensus       625 ~t~lhlAak~~~l~~~~~~~LL~~-~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d-~~G~TpLH~A  702 (1078)
                      ......|++.+.+  +.++.|++. +.+++..+.++  -+++|.|+- ++...++++|+++|+++|..+ .-|.||||||
T Consensus        45 ~~~~v~A~q~G~l--~~v~~lve~~g~~v~~~D~~g--~tlLHWAAi-NNrl~v~r~li~~gadvn~~gG~l~stPLHWA  119 (600)
T KOG0509|consen   45 LDDIVKATQYGEL--ETVKELVESEGESVNNPDREG--VTLLHWAAI-NNRLDVARYLISHGADVNAIGGVLGSTPLHWA  119 (600)
T ss_pred             hhhhhhHhhcchH--HHHHHHHhhcCcCCCCCCcCC--ccceeHHHH-cCcHHHHHHHHHcCCCccccCCCCCCCcchHH
Confidence            3445678888886  778888877 77777777644  366666655 446678999999999999998 7799999999


Q ss_pred             HHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHH
Q 001436          703 ASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI  782 (1078)
Q Consensus       703 a~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~i  782 (1078)
                      |.+|+..+|.+|+++|||++.+|..|.||||+||..|+.-+|.+||.+|+++|.      +|.+|+||||+|+.+|+...
T Consensus       120 ar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~------~D~~grTpLmwAaykg~~~~  193 (600)
T KOG0509|consen  120 ARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDL------RDNNGRTPLMWAAYKGFALF  193 (600)
T ss_pred             HHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCC------cCCCCCCHHHHHHHhcccHH
Confidence            999999999999999999999999999999999999999999999999999888      66899999999999999988


Q ss_pred             HHHHHHcCCCcccccCccCC-CCCCChhHHhHH----HHHHHHHHccCCCCCCCCCcchhcccchHHHHHHHHHH
Q 001436          783 SGFLAESSLTSLLLSLKMND-SADDGALEDSIA----KAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQA  852 (1078)
Q Consensus       783 v~~LLe~ga~~~~adln~kd-~~g~tal~~a~~----~~v~~Lle~ga~~~~~~~~e~~lslkdsltAl~~Aaqa  852 (1078)
                      +..||..|+.     ++.+| ..|.||||.+..    .++..|++.|++..        .....+.++...|.+.
T Consensus       194 v~~LL~f~a~-----~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d--------~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  194 VRRLLKFGAS-----LLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLD--------KTNTNGKTPFDLAQER  255 (600)
T ss_pred             HHHHHHhccc-----ccccccccCCchHHHHHhcCCcceEehhhhcCCccc--------ccccCCCCHHHHHHHh
Confidence            9999999954     77777 889999999774    55665555555422        3345577888777654

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.87  E-value=2.5e-22  Score=224.95  Aligned_cols=221  Identities=20%  Similarity=0.191  Sum_probs=177.6

Q ss_pred             hhhcCCchHHHHHHHCCC----CccCCCCCCCCCchHHHHHhCCCcccchhhhhhccC-CCCCCcccCCCCCCccHHHHH
Q 001436          529 SCMFAEVEVPAEVLADGV----LCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVG-SVKDADISDIYGSSTSESFLH  603 (1078)
Q Consensus       529 Ac~fG~veVv~~LLq~Gv----~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~-~gadvn~~d~~G~~~t~Lhl~  603 (1078)
                      |+.+|.+...+.|+-...    ..| ......|.|||-+||.+|+  .+|++  |++. -++++...   |  .-.    
T Consensus        11 aa~~g~l~~l~~ll~~~s~~ei~~l-~~~~~~g~tPL~iaaRnGH--~~vVe--yLle~~~a~~e~~---G--sV~----   76 (615)
T KOG0508|consen   11 AARDGKLQLLAKLLINSSNEEIISL-IGEVQNGGTPLLIAARNGH--ADVVE--YLLEHCRASPEQG---G--SVR----   76 (615)
T ss_pred             HhhhhhHHHHHHHHhCCchHHHHHH-hccccCCCCceeeehhcCc--HHHHH--HHHHHhcCCccCC---c--eEE----
Confidence            566788877777765422    222 2345678899999999999  78877  5554 23433322   1  000    


Q ss_pred             HHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHh
Q 001436          604 LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCE  683 (1078)
Q Consensus       604 ~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle  683 (1078)
                                   -.-....|.+||-.|+..+++  ++++.|+.+++++|..+..+  .+|+..+|- .|+..++++|++
T Consensus        77 -------------FDge~IegappLWaAsaAGHl--~vVk~L~~~ga~VN~tT~TN--StPLraACf-DG~leivKyLvE  138 (615)
T KOG0508|consen   77 -------------FDGETIEGAPPLWAASAAGHL--EVVKLLLRRGASVNDTTRTN--STPLRAACF-DGHLEIVKYLVE  138 (615)
T ss_pred             -------------eCCcccCCCchhhHHhccCcH--HHHHHHHHhcCccccccccC--CccHHHHHh-cchhHHHHHHHH
Confidence                         011234567888889999996  99999999999999877422  356655555 557788999999


Q ss_pred             CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 001436          684 DGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPE  763 (1078)
Q Consensus       684 ~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~  763 (1078)
                      +|+|++..|..|.|.||+||..||.+|+++|++.|+|+|.++..|.|+||.|+..|+.+++++|+.+|+.+..       
T Consensus       139 ~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~-------  211 (615)
T KOG0508|consen  139 HGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV-------  211 (615)
T ss_pred             cCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeee-------
Confidence            9999999999999999999999999999999999999999999999999999999999999999999998864       


Q ss_pred             CCCCCCHHHHHHhcCcHHHHHHHHH
Q 001436          764 FPLSRTPSDLASSNGHKGISGFLAE  788 (1078)
Q Consensus       764 D~~G~TPLhlAa~~G~~~iv~~LLe  788 (1078)
                      |..|.|||..|+..|+.++|.+|+.
T Consensus       212 d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  212 DGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             cCCCCchHHHHhhhcchHHHHHHhc
Confidence            5689999999999999999999996

>PHA02795 ankyrin-like protein; Provisional

Probab=99.86  E-value=5.6e-21  Score=221.63  Aligned_cols=231  Identities=13%  Similarity=-0.028  Sum_probs=180.9

Q ss_pred             hhhhhccCCCCCCcccCCCCCCccHHHHHHHHHHHHHhCCCCCc------CCccCcccHHHHHHH--hccchhHHHHHHH
Q 001436          575 REFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQN------HLSEGLCEKQKLISK--IIQLKEEEESYQM  646 (1078)
Q Consensus       575 v~feyll~~gadvn~~d~~G~~~t~Lhl~~rlvkLLl~~g~~~~------~~~~~g~t~lhlAak--~~~l~~~~~~~LL  646 (1078)
                      +.++|.+.+|+++|..+.+|  ..+..-..+++.+|+..+...+      ...+.+.++||+++.  .++  .+.+++|+
T Consensus        63 ~~~~~~~~~~~~i~~~~~~~--~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~--~eiV~~LI  138 (437)
T PHA02795         63 VLYDYFRIHRDNIDQYIVDR--LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVE--IDIVDFMV  138 (437)
T ss_pred             HHHHHHHHcCcchhhhhhhh--HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCC--HHHHHHHH
Confidence            34678889999998887776  2222236788999999886644      466778999999999  666  59999999


Q ss_pred             hhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHhCCCCCCccC------CCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 001436          647 VEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILD------DEGQGVLHLAASLGYDWAIKPTVTAGVS  720 (1078)
Q Consensus       647 ~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d------~~G~TpLH~Aa~~G~~~iv~~LL~~Gad  720 (1078)
                      .+|++++..+.    .+++|.++.. +...++++|+++|++++...      ..|.|++|.|+..++.+++++|+++|++
T Consensus       139 ~~GADIn~~~~----~t~lh~A~~~-~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GAD  213 (437)
T PHA02795        139 DHGAVIYKIEC----LNAYFRGICK-KESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIED  213 (437)
T ss_pred             HCCCCCCCCCC----CCHHHHHHHc-CcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCC
Confidence            99999987432    4677776654 46678999999998543222      3488999999999999999999999999


Q ss_pred             ccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcC--------cHHHHHHHHHcCCC
Q 001436          721 INFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNG--------HKGISGFLAESSLT  792 (1078)
Q Consensus       721 in~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G--------~~~iv~~LLe~ga~  792 (1078)
                      +|.+|..|+||||+|+..|+.++|++|+++||+++.      +|..|.||||+|+..|        |.+++++|+++|++
T Consensus       214 IN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~------~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gad  287 (437)
T PHA02795        214 INQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNA------VMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLS  287 (437)
T ss_pred             cCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCC
Confidence            999999999999999999999999999999999988      5579999999999998        47999999999965


Q ss_pred             cccccCccCCCCCCChhHHhHHHHHHHHHHccCC
Q 001436          793 SLLLSLKMNDSADDGALEDSIAKAVQTVSEKTAT  826 (1078)
Q Consensus       793 ~~~adln~kd~~g~tal~~a~~~~v~~Lle~ga~  826 (1078)
                           ++.....+..- ..-....++.++++...
T Consensus       288 -----I~~~~~~~~~~-~~~n~~~ik~lI~y~~~  315 (437)
T PHA02795        288 -----IDCIKLAILNN-TIENHDVIKLCIKYFMM  315 (437)
T ss_pred             -----CCchhHHhhhc-ccchHHHHHHHHHHHHh
Confidence                 44332211000 01144666777766654

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.85  E-value=3e-21  Score=216.35  Aligned_cols=192  Identities=13%  Similarity=0.030  Sum_probs=165.4

Q ss_pred             ccCcccHHHHHHHhccchhHHHHHHHhh-cCCCCC-----cCcccccchHHHHHHHHcCHHHHHHHHHhCCCCCCccCCC
Q 001436          621 SEGLCEKQKLISKIIQLKEEEESYQMVE-ANPEKN-----LSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDE  694 (1078)
Q Consensus       621 ~~~g~t~lhlAak~~~l~~~~~~~LL~~-~ad~n~-----~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d~~  694 (1078)
                      ..+|.+|+-+|++.++.  +++++|+++ ++++..     .+.....+.+...++...++..+|+.|+++|+++|.....
T Consensus        39 ~~~g~tPL~iaaRnGH~--~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~T  116 (615)
T KOG0508|consen   39 VQNGGTPLLIAARNGHA--DVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRT  116 (615)
T ss_pred             ccCCCCceeeehhcCcH--HHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcccccccc
Confidence            45667999999999995  999999963 333221     2222344678888888899999999999999999999988


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 001436          695 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLA  774 (1078)
Q Consensus       695 G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlA  774 (1078)
                      ..|||-.||.-|+.++|++|+++|+|++..|..|.|.||+||+.||.+|+++|++.|||+|.      ++..|.|+||.|
T Consensus       117 NStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~------ks~kGNTALH~c  190 (615)
T KOG0508|consen  117 NSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNA------KSYKGNTALHDC  190 (615)
T ss_pred             CCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcch------hcccCchHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999998      457999999999


Q ss_pred             HhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHHHHHHHHHHccCC
Q 001436          775 SSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTAT  826 (1078)
Q Consensus       775 a~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~~~v~~Lle~ga~  826 (1078)
                      +..|+.+|+++|+.+|+.     ++ +|..|.||+..|+..++..+++++.+
T Consensus       191 aEsG~vdivq~Ll~~ga~-----i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  191 AESGSVDIVQLLLKHGAK-----ID-VDGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             hhcccHHHHHHHHhCCce-----ee-ecCCCCchHHHHhhhcchHHHHHHhc
Confidence            999999999999999965     44 45559999999987777776666664

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.84  E-value=3.7e-20  Score=198.10  Aligned_cols=146  Identities=15%  Similarity=0.074  Sum_probs=113.4

Q ss_pred             cccHHHHHHHhc--cchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHc--CHHHHHHHHHhCCCCCCccCCCCCcHH
Q 001436          624 LCEKQKLISKII--QLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEK--LYSWLLRKVCEDGKGPCILDDEGQGVL  699 (1078)
Q Consensus       624 g~t~lhlAak~~--~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~--~~~~lvk~Lle~Gad~n~~d~~G~TpL  699 (1078)
                      |.||||+|+..+  +  .++++.|++.+++++..+. ....+++|.++...  +...++++|++.|+++|.+|..|.|||
T Consensus        51 g~TpLh~a~~~~~~~--~eiv~~Ll~~gadvn~~~~-~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpL  127 (209)
T PHA02859         51 YETPIFSCLEKDKVN--VEILKFLIENGADVNFKTR-DNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLL  127 (209)
T ss_pred             CCCHHHHHHHcCCCC--HHHHHHHHHCCCCCCccCC-CCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence            344555554432  3  3556666666666655531 12235666555432  346789999999999999999999999


Q ss_pred             HHHHH--cCCHHHHHHHHhCCCCccccCCCCchHHHH-HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHh
Q 001436          700 HLAAS--LGYDWAIKPTVTAGVSINFRDLSGWTALHW-AAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS  776 (1078)
Q Consensus       700 H~Aa~--~G~~~iv~~LL~~Gadin~~D~~G~TpLH~-Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~  776 (1078)
                      |+|+.  .++.+++++|+++|++++.+|..|.||||. |+..|+.+++++|+++|++++.      +|..|.||||+|..
T Consensus       128 h~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~------~d~~g~tpl~la~~  201 (209)
T PHA02859        128 HMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINE------TNKSGYNCYDLIKF  201 (209)
T ss_pred             HHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHhh
Confidence            99876  468999999999999999999999999995 5678999999999999999988      55799999999987


Q ss_pred             cC
Q 001436          777 NG  778 (1078)
Q Consensus       777 ~G  778 (1078)
                      ++
T Consensus       202 ~~  203 (209)
T PHA02859        202 RN  203 (209)
T ss_pred             hh
Confidence            64

>PHA02795 ankyrin-like protein; Provisional

Probab=99.83  E-value=1.5e-19  Score=209.67  Aligned_cols=203  Identities=9%  Similarity=-0.027  Sum_probs=167.7

Q ss_pred             HHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcC----cccccchHHHHHHH-HcCHHHHHHHH
Q 001436          607 ERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLS----QHVEKYQILQKIMK-EKLYSWLLRKV  681 (1078)
Q Consensus       607 vkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s----~~~~~~t~L~~aa~-~~~~~~lvk~L  681 (1078)
                      -++++..|+..+....++     +++..+.  .+.++.|++++++++-.+    ......++||.++. ..++..++++|
T Consensus        65 ~~~~~~~~~~i~~~~~~~-----~~~~~~~--k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~L  137 (437)
T PHA02795         65 YDYFRIHRDNIDQYIVDR-----LFAYITY--KDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFM  137 (437)
T ss_pred             HHHHHHcCcchhhhhhhh-----HHhhcch--HHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHH
Confidence            456777776555544444     7777777  599999999999977111    23345688887776 24688899999


Q ss_pred             HhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccc-c-----CCCCchHHHHHHHcCCHHHHHHHHHcCCCCC
Q 001436          682 CEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINF-R-----DLSGWTALHWAAYCGREKTVAVLLSLGAAPG  755 (1078)
Q Consensus       682 le~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~-~-----D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn  755 (1078)
                      +++||+++..  .+.||||.|+..|+.+++++|+++|++.+. .     +..|.||+|.|+..++.+++++|+++||++|
T Consensus       138 I~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN  215 (437)
T PHA02795        138 VDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDIN  215 (437)
T ss_pred             HHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcC
Confidence            9999999974  458999999999999999999999985432 2     2458899999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHH------------HHHHHHHHc
Q 001436          756 LLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA------------KAVQTVSEK  823 (1078)
Q Consensus       756 ~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~------------~~v~~Lle~  823 (1078)
                      .      +|..|.||||+|+..|+.+++++|+++|+     +++.+|..|.||+|.|+.            ++++.|++.
T Consensus       216 ~------kD~~G~TpLh~Aa~~g~~eiVelLL~~GA-----dIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~  284 (437)
T PHA02795        216 Q------LDAGGRTLLYRAIYAGYIDLVSWLLENGA-----NVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLRE  284 (437)
T ss_pred             c------CCCCCCCHHHHHHHcCCHHHHHHHHHCCC-----CCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhC
Confidence            8      55799999999999999999999999995     489999999999999864            578899999


Q ss_pred             cCCCCC
Q 001436          824 TATPAN  829 (1078)
Q Consensus       824 ga~~~~  829 (1078)
                      |++.+.
T Consensus       285 gadI~~  290 (437)
T PHA02795        285 PLSIDC  290 (437)
T ss_pred             CCCCCc
Confidence            987664

>PHA02792 ankyrin-like protein; Provisional

Probab=99.81  E-value=1.8e-18  Score=207.28  Aligned_cols=286  Identities=12%  Similarity=0.001  Sum_probs=195.2

Q ss_pred             HHHHHHHCCCCccCCCCCCCCCchHHHHHhCCC--cccchhhhhhccCCCCCCcccCCCCCCccHHHH------HHHHHH
Q 001436          537 VPAEVLADGVLCCRIPPHAVGRVPFYITCSNRL--ACSEVREFDYIVGSVKDADISDIYGSSTSESFL------HLRLER  608 (1078)
Q Consensus       537 Vv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~--~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl------~~rlvk  608 (1078)
                      -...|++.|+.+-.   ...|.||||.-...++  .-.+++..+ +    ..++.++-+|  .+++|+      ++++++
T Consensus        20 ~~~~l~~~g~~~~~---~~~~~t~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~n~~~--~~~~~~~~s~n~~lElvk   89 (631)
T PHA02792         20 SAQSLIESGANPLY---EYDGETPLKAYVTKKNNNIKNDVVILL-L----SSVDYKNIND--FDIFEYLCSDNIDIELLK   89 (631)
T ss_pred             HHHHHHHcCCCccc---ccCCCccHHHHHhhhhhhHHHHHHHHH-H----hCCCcCccCC--ccHHHHHHHhcccHHHHH
Confidence            34566777776332   3556677776543332  112222211 1    1223333333  445554      567777


Q ss_pred             HHHhCCCCCcCCccCcccHHHHHHH-hccchhHHHHHHHhhcCCCCCc--------------------------------
Q 001436          609 ILSMRSSPQNHLSEGLCEKQKLISK-IIQLKEEEESYQMVEANPEKNL--------------------------------  655 (1078)
Q Consensus       609 LLl~~g~~~~~~~~~g~t~lhlAak-~~~l~~~~~~~LL~~~ad~n~~--------------------------------  655 (1078)
                      +|+..|++.+..++.+.+++++|.. .++  .++++.|++.|++....                                
T Consensus        90 ~LI~~GAdvN~~~n~~~~~l~ya~~~~~~--~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (631)
T PHA02792         90 LLISKGLEINSIKNGINIVEKYATTSNPN--VDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYT  167 (631)
T ss_pred             HHHHcCCCcccccCCCCcceeEeecCCCC--hHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccc
Confidence            7777776666666666666666644 345  36777777666652210                                


Q ss_pred             --CcccccchHHHHHHHHc---C---HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC--CH-----------------
Q 001436          656 --SQHVEKYQILQKIMKEK---L---YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLG--YD-----------------  708 (1078)
Q Consensus       656 --s~~~~~~t~L~~aa~~~---~---~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G--~~-----------------  708 (1078)
                        -.+..+.|+||.++..+   .   ...++++|+++|++++..|..|.||||+|+...  ..                 
T Consensus       168 i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~  247 (631)
T PHA02792        168 TDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELM  247 (631)
T ss_pred             cccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccccccchH
Confidence              01223468888888776   1   467899999999999999999999999999755  22                 


Q ss_pred             --------------------------------------------------------------------------HHHHHH
Q 001436          709 --------------------------------------------------------------------------WAIKPT  714 (1078)
Q Consensus       709 --------------------------------------------------------------------------~iv~~L  714 (1078)
                                                                                                +++++|
T Consensus       248 ~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~L  327 (631)
T PHA02792        248 NILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCM  327 (631)
T ss_pred             hHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHH
Confidence                                                                                      336667


Q ss_pred             HhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHH---HHHHHHHcCC
Q 001436          715 VTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKG---ISGFLAESSL  791 (1078)
Q Consensus       715 L~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~---iv~~LLe~ga  791 (1078)
                      +++|++++  ...+..++|.||..|+.++|++|+++||+++..+.    +..|.||||+|+..+..+   ++++|+++|+
T Consensus       328 Id~Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~----~g~~~TpLh~A~~n~~~~v~~IlklLIs~GA  401 (631)
T PHA02792        328 IDEGATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDD----NIINIMPLFPTLSIHESDVLSILKLCKPYID  401 (631)
T ss_pred             HHCCCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcC----CCCChhHHHHHHHhccHhHHHHHHHHHhcCC
Confidence            77777764  22356789999999999999999999999988441    223579999988776644   5888899885


Q ss_pred             CcccccCccCCCCCCChhHHhH----HHHHHHHHHccCCCCCCCCCcchhcccchHHHHHHHHHHh
Q 001436          792 TSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAA  853 (1078)
Q Consensus       792 ~~~~adln~kd~~g~tal~~a~----~~~v~~Lle~ga~~~~~~~~e~~lslkdsltAl~~AaqaA  853 (1078)
                           ++|.+|..|.||+|.|.    .+.++.|++.|++++..+        ..+.|+++.|..++
T Consensus       402 -----DIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD--------~~G~TpL~~A~~~~  454 (631)
T PHA02792        402 -----DINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITT--------KYGSTCIGICVILA  454 (631)
T ss_pred             -----ccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcC--------CCCCCHHHHHHHHH
Confidence                 59999999999999987    578899999999877644        56778888887644

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.79  E-value=8.5e-19  Score=222.38  Aligned_cols=174  Identities=13%  Similarity=-0.038  Sum_probs=142.9

Q ss_pred             CcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHHH
Q 001436          623 GLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLA  702 (1078)
Q Consensus       623 ~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~A  702 (1078)
                      .+.++++.|+..++  .+.++.|++.+++.+..+..+  .+++|.|+. .++..++++|++.|+++|.+|..|.||||+|
T Consensus       524 ~~~~~L~~Aa~~g~--~~~l~~Ll~~G~d~n~~d~~G--~TpLh~Aa~-~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A  598 (823)
T PLN03192        524 NMASNLLTVASTGN--AALLEELLKAKLDPDIGDSKG--RTPLHIAAS-KGYEDCVLVLLKHACNVHIRDANGNTALWNA  598 (823)
T ss_pred             cchhHHHHHHHcCC--HHHHHHHHHCCCCCCCCCCCC--CCHHHHHHH-cChHHHHHHHHhcCCCCCCcCCCCCCHHHHH
Confidence            45678888888888  488888888888888776544  577777765 4567788899999999999999999999999


Q ss_pred             HHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHH
Q 001436          703 ASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI  782 (1078)
Q Consensus       703 a~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~i  782 (1078)
                      +..|+.+++++|+..++..+.  ..|.||||+||..|+.++++.|+++|+++|.      +|..|.||||+|+..|+.++
T Consensus       599 ~~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~------~d~~G~TpLh~A~~~g~~~i  670 (823)
T PLN03192        599 ISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDS------EDHQGATALQVAMAEDHVDM  670 (823)
T ss_pred             HHhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCcHHH
Confidence            999999999999888776543  4577899999999999999999999998887      55789999999999999999


Q ss_pred             HHHHHHcCCCcccccCccCCCCC-CChhHHhHH
Q 001436          783 SGFLAESSLTSLLLSLKMNDSAD-DGALEDSIA  814 (1078)
Q Consensus       783 v~~LLe~ga~~~~adln~kd~~g-~tal~~a~~  814 (1078)
                      +++|+++|++     ++..|..| .+|.+++..
T Consensus       671 v~~Ll~~GAd-----v~~~~~~g~~t~~~l~~~  698 (823)
T PLN03192        671 VRLLIMNGAD-----VDKANTDDDFSPTELREL  698 (823)
T ss_pred             HHHHHHcCCC-----CCCCCCCCCCCHHHHHHH
Confidence            9999998854     77777777 778776543

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.77  E-value=5.2e-18  Score=215.27  Aligned_cols=156  Identities=21%  Similarity=0.193  Sum_probs=141.3

Q ss_pred             chHHHHHHHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCH
Q 001436          662 YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE  741 (1078)
Q Consensus       662 ~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~  741 (1078)
                      ..+++.+|. .+...+++.|++.|+++|..|..|+||||+||..|+.+++++|+++|+++|.+|.+|+||||+|+..|+.
T Consensus       526 ~~~L~~Aa~-~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~  604 (823)
T PLN03192        526 ASNLLTVAS-TGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHH  604 (823)
T ss_pred             hhHHHHHHH-cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCH
Confidence            466777766 4566789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH----HHHH
Q 001436          742 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAV  817 (1078)
Q Consensus       742 eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~----~~~v  817 (1078)
                      +++++|+..++..+.        ..|.||||+|+.+|+.+++++|+++|++     +|.+|..|.||+|.|.    .+++
T Consensus       605 ~iv~~L~~~~~~~~~--------~~~~~~L~~Aa~~g~~~~v~~Ll~~Gad-----in~~d~~G~TpLh~A~~~g~~~iv  671 (823)
T PLN03192        605 KIFRILYHFASISDP--------HAAGDLLCTAAKRNDLTAMKELLKQGLN-----VDSEDHQGATALQVAMAEDHVDMV  671 (823)
T ss_pred             HHHHHHHhcCcccCc--------ccCchHHHHHHHhCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCcHHHH
Confidence            999999998876543        4678999999999999999999999964     8999999999999977    6789


Q ss_pred             HHHHHccCCCCCCC
Q 001436          818 QTVSEKTATPANDN  831 (1078)
Q Consensus       818 ~~Lle~ga~~~~~~  831 (1078)
                      +.|++.|++++..+
T Consensus       672 ~~Ll~~GAdv~~~~  685 (823)
T PLN03192        672 RLLIMNGADVDKAN  685 (823)
T ss_pred             HHHHHcCCCCCCCC
Confidence            99999999877654

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.77  E-value=1.4e-18  Score=179.29  Aligned_cols=229  Identities=17%  Similarity=0.076  Sum_probs=163.3

Q ss_pred             hhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHHHHHHH
Q 001436          528 WSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLE  607 (1078)
Q Consensus       528 ~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl~~rlv  607 (1078)
                      -+...|+.++....++-... |...++..|+..+++++-.++    +.+....+..++..|..+..+  |+++.+.+   
T Consensus        68 ~~~~s~nsd~~v~s~~~~~~-~~~~t~p~g~~~~~v~ap~~s----~~k~sttltN~~rgnevs~~p--~s~~slsV---  137 (296)
T KOG0502|consen   68 VAVRSGNSDVAVQSAQLDPD-AIDETDPEGWSALLVAAPCGS----VDKVSTTLTNGARGNEVSLMP--WSPLSLSV---  137 (296)
T ss_pred             hhhhcCCcHHHHHhhccCCC-CCCCCCchhhhhhhhcCCCCC----cceeeeeecccccCCcccccc--CChhhHHH---
Confidence            45667777788777776666 555566669999999886554    333335566667777666665  66665422   


Q ss_pred             HHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHhCCCC
Q 001436          608 RILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKG  687 (1078)
Q Consensus       608 kLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~Gad  687 (1078)
                                               ...++  +....+  ....+|..+..+   .+.+.+++.+++..++++|++.|++
T Consensus       138 -------------------------hql~L--~~~~~~--~~n~VN~~De~G---fTpLiWAaa~G~i~vV~fLL~~GAd  185 (296)
T KOG0502|consen  138 -------------------------HQLHL--DVVDLL--VNNKVNACDEFG---FTPLIWAAAKGHIPVVQFLLNSGAD  185 (296)
T ss_pred             -------------------------HHHHH--HHHHHH--hhccccCccccC---chHhHHHHhcCchHHHHHHHHcCCC
Confidence                                     11121  111111  122334443333   3334444556677888999999999


Q ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 001436          688 PCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLS  767 (1078)
Q Consensus       688 ~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G  767 (1078)
                      |+...+...|+|.+|+..|+.++|++||.+++|+|.-|.+|-|||-||++.||.+||+.||..||+++..+      ..|
T Consensus       186 p~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~------dsG  259 (296)
T KOG0502|consen  186 PDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQED------DSG  259 (296)
T ss_pred             hhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCccccc------ccC
Confidence            99988888899999999999999999999999999999999999999999999999999999999988744      589


Q ss_pred             CCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhH
Q 001436          768 RTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALE  810 (1078)
Q Consensus       768 ~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~  810 (1078)
                      .+++.+|+..|+. +|+..+++-+.     .+.+|+.-.+|+|
T Consensus       260 y~~mdlAValGyr-~Vqqvie~h~l-----kl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  260 YWIMDLAVALGYR-IVQQVIEKHAL-----KLCQDSEKRTPLH  296 (296)
T ss_pred             CcHHHHHHHhhhH-HHHHHHHHHHH-----HHhhcccCCCCCC
Confidence            9999999999987 88888876643     5556655555543

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.77  E-value=2.4e-18  Score=177.57  Aligned_cols=133  Identities=21%  Similarity=0.127  Sum_probs=115.9

Q ss_pred             chHHHHHHHHcCHH---HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHH---HHHHHhCCCCccccC-CCCchHHHH
Q 001436          662 YQILQKIMKEKLYS---WLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWA---IKPTVTAGVSINFRD-LSGWTALHW  734 (1078)
Q Consensus       662 ~t~L~~aa~~~~~~---~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~i---v~~LL~~Gadin~~D-~~G~TpLH~  734 (1078)
                      .+.+|.+++.+...   .+++.|++.|++++.+|..|+||||+||..|+.++   +++|+.+|+++|.+| ..|+||||+
T Consensus        21 ~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~  100 (166)
T PHA02743         21 QNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHI  100 (166)
T ss_pred             CcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Confidence            46788888877664   45557788999999999999999999999998654   789999999999998 589999999


Q ss_pred             HHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCC
Q 001436          735 AAYCGREKTVAVLLS-LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSAD  805 (1078)
Q Consensus       735 Aa~~G~~eiV~~LL~-~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g  805 (1078)
                      |+..|+.+++++|+. .|++++.      +|..|.||||+|+..|+.+++++|+++|++     ++.++..|
T Consensus       101 A~~~g~~~iv~~Ll~~~gad~~~------~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~-----~~~~~~~~  161 (166)
T PHA02743        101 AASTKNYELAEWLCRQLGVNLGA------INYQHETAYHIAYKMRDRRMMEILRANGAV-----CDDPLSIG  161 (166)
T ss_pred             HHHhCCHHHHHHHHhccCCCccC------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcccCC
Confidence            999999999999995 8999987      557999999999999999999999999965     66666655

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.76  E-value=5.3e-18  Score=213.24  Aligned_cols=224  Identities=15%  Similarity=0.027  Sum_probs=155.2

Q ss_pred             cchhhhhcCCchHHHHHHHC--CCCccCCCCCCCCCchHH-HHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHH
Q 001436          525 KCKWSCMFAEVEVPAEVLAD--GVLCCRIPPHAVGRVPFY-ITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESF  601 (1078)
Q Consensus       525 ~~~~Ac~fG~veVv~~LLq~--Gv~rC~~p~~~~G~TPLh-vA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lh  601 (1078)
                      ....||..|+++.+..+++.  +++  .+..+..|+|||| .|+.+++  .++++  ++...++    .+          
T Consensus        20 ~~l~A~~~g~~~~v~~lL~~~~~~~--in~~d~~G~t~Lh~~A~~~~~--~eiv~--lLl~~g~----~~----------   79 (743)
T TIGR00870        20 AFLPAAERGDLASVYRDLEEPKKLN--INCPDRLGRSALFVAAIENEN--LELTE--LLLNLSC----RG----------   79 (743)
T ss_pred             HHHHHHHcCCHHHHHHHhccccccC--CCCcCccchhHHHHHHHhcCh--HHHHH--HHHhCCC----CC----------
Confidence            35579999999999999998  666  6667888999999 7777776  55555  3333332    22          


Q ss_pred             HHHHHHHHHHhCCCCCcCCccCcccHHHHHHHhc--cchhHHHHHHHhhcCC------CCC--cCcccccchHHHHHHHH
Q 001436          602 LHLRLERILSMRSSPQNHLSEGLCEKQKLISKII--QLKEEEESYQMVEANP------EKN--LSQHVEKYQILQKIMKE  671 (1078)
Q Consensus       602 l~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~--~l~~~~~~~LL~~~ad------~n~--~s~~~~~~t~L~~aa~~  671 (1078)
                                          ..|.|+||.|+...  .. ...+..+......      .+.  .+....+.|++|.|+..
T Consensus        80 --------------------~~G~T~Lh~A~~~~~~~v-~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~  138 (743)
T TIGR00870        80 --------------------AVGDTLLHAISLEYVDAV-EAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHR  138 (743)
T ss_pred             --------------------CcChHHHHHHHhccHHHH-HHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHh
Confidence                                23445555554411  11 1222222211110      000  11111234666666654


Q ss_pred             cCHHHHHHHHHhCCCCCCccC--------------CCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHH
Q 001436          672 KLYSWLLRKVCEDGKGPCILD--------------DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY  737 (1078)
Q Consensus       672 ~~~~~lvk~Lle~Gad~n~~d--------------~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~  737 (1078)
                      + ...++++|++.|++++.++              ..|.||||+|+..|+.+++++|+++|+|+|.+|..|+||||+|+.
T Consensus       139 ~-~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~  217 (743)
T TIGR00870       139 Q-NYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVM  217 (743)
T ss_pred             C-CHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHh
Confidence            4 5567888888888887653              359999999999999999999999999999999999999999999


Q ss_pred             cC---------CHHHHHHHHHcCCCCCCCCC-CCCCCCCCCCHHHHHHhcCcHHHHHHHHHcC
Q 001436          738 CG---------REKTVAVLLSLGAAPGLLTD-PSPEFPLSRTPSDLASSNGHKGISGFLAESS  790 (1078)
Q Consensus       738 ~G---------~~eiV~~LL~~GAdvn~~~d-~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~g  790 (1078)
                      .+         ...+.++++..++....... .+..|..|.||||+|+..|+.+++++|++.+
T Consensus       218 ~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~  280 (743)
T TIGR00870       218 ENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIK  280 (743)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHH
Confidence            87         34567778877776533210 0336789999999999999999999999954

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.76  E-value=8.7e-19  Score=209.17  Aligned_cols=288  Identities=13%  Similarity=0.030  Sum_probs=242.4

Q ss_pred             ccccchhhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCccc-CCCCCCccHH
Q 001436          522 EVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADIS-DIYGSSTSES  600 (1078)
Q Consensus       522 ~~~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~-d~~G~~~t~L  600 (1078)
                      +-+++..+|.-|+.|++..||..|+.  ....+..|.|||.+|+..||  ..|+.  .++++.++++.. |..+  .|+|
T Consensus       757 ~~t~LT~acaggh~e~vellv~rgan--iehrdkkgf~plImaatagh--~tvV~--~llk~ha~veaQsdrtk--dt~l  828 (2131)
T KOG4369|consen  757 IKTNLTSACAGGHREEVELLVVRGAN--IEHRDKKGFVPLIMAATAGH--ITVVQ--DLLKAHADVEAQSDRTK--DTML  828 (2131)
T ss_pred             ccccccccccCccHHHHHHHHHhccc--ccccccccchhhhhhcccCc--hHHHH--HHHhhhhhhhhhccccc--CceE
Confidence            44567899999999999999999988  77889999999999999999  66766  667777888876 4444  7777


Q ss_pred             HH-----HHHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHH
Q 001436          601 FL-----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYS  675 (1078)
Q Consensus       601 hl-----~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~  675 (1078)
                      .|     ..+++.+|+..++.....+....+++.+|..-+.  .+++..|+..|+.+|...-....-.+| .++.-.++.
T Consensus       829 Slacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy--~~iI~~llS~GseInSrtgSklgisPL-mlatmngh~  905 (2131)
T KOG4369|consen  829 SLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGY--TKIIHALLSSGSEINSRTGSKLGISPL-MLATMNGHQ  905 (2131)
T ss_pred             EEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcch--HHHHHHHhhcccccccccccccCcchh-hhhhhcccc
Confidence            66     6799999999998888888889999999988888  589999999998888776544333444 455556777


Q ss_pred             HHHHHHHhCCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCC
Q 001436          676 WLLRKVCEDGKGPCILD-DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP  754 (1078)
Q Consensus       676 ~lvk~Lle~Gad~n~~d-~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdv  754 (1078)
                      ..++.|++.|.|+|..- .+-.|+|-+|+..|+.++|.+||.+.+++..+-+.|.|||+-+|..|.+++-++||..|||+
T Consensus       906 ~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~  985 (2131)
T KOG4369|consen  906 AATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADT  985 (2131)
T ss_pred             HHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhccccc
Confidence            88899999999999763 45679999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH----HHHHHHHHHccCCCCC
Q 001436          755 GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPAN  829 (1078)
Q Consensus       755 n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~----~~~v~~Lle~ga~~~~  829 (1078)
                      |+---    -..-.|+|-+++..||...+.+|+...+.     +.++|++|.|+|-++.    ...+..|++.++++..
T Consensus       986 nasPv----p~T~dtalti~a~kGh~kfv~~lln~~at-----v~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~ 1055 (2131)
T KOG4369|consen  986 NASPV----PNTWDTALTIPANKGHTKFVPKLLNGDAT-----VRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQ 1055 (2131)
T ss_pred             ccCCC----CCcCCccceeecCCCchhhhHHhhCCccc-----eecccCCCCcccchhccCCccccchHHhhcccChhh
Confidence            98432    23456899999999999999999987754     8889999999876654    5677888888887654

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.74  E-value=3.8e-18  Score=195.66  Aligned_cols=222  Identities=21%  Similarity=0.234  Sum_probs=177.1

Q ss_pred             hhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHH-----
Q 001436          528 WSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-----  602 (1078)
Q Consensus       528 ~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl-----  602 (1078)
                      =||+-|+.+-+..||..|+.  .+..+.+|.|+||-+|...+  .+++.  |++..|++||..|.+|  |||+|.     
T Consensus        46 ~A~~~~d~~ev~~ll~~ga~--~~~~n~DglTalhq~~id~~--~e~v~--~l~e~ga~Vn~~d~e~--wtPlhaaascg  117 (527)
T KOG0505|consen   46 EACSRGDLEEVRKLLNRGAS--PNLCNVDGLTALHQACIDDN--LEMVK--FLVENGANVNAQDNEG--WTPLHAAASCG  117 (527)
T ss_pred             hccccccHHHHHHHhccCCC--ccccCCccchhHHHHHhccc--HHHHH--HHHHhcCCcccccccc--CCcchhhcccc
Confidence            48999999999999999987  67778999999999999877  77777  8889999999999999  999997     


Q ss_pred             HHHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHh-hcCCCCCcCcccccchHHHHHHHHcCHHHHHHHH
Q 001436          603 HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMV-EANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKV  681 (1078)
Q Consensus       603 ~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~-~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~L  681 (1078)
                      |+.++.+|+..|+.....+..|..|+.++..-..+  ++...-+. .+.++.     ..+...-...     ... ++..
T Consensus       118 ~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~--~~l~~~~~r~gi~ie-----a~R~~~e~~m-----l~D-~~q~  184 (527)
T KOG0505|consen  118 YLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATL--DVLETEMARQGIDIE-----AARKAEEQTM-----LDD-ARQW  184 (527)
T ss_pred             cHHHHHHHHHhhhhhhhccCCCCCccccccCcchh--HHHHHHHHHhcccHH-----HHhhhhHHHH-----HHH-HHHH
Confidence            89999999999988888888888777665544432  22222220 111111     0111111111     111 2233


Q ss_pred             HhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 001436          682 CEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPS  761 (1078)
Q Consensus       682 le~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~  761 (1078)
                      +..|...++.+..|-|.||.|+..|+.++.++||.+|.+++.+|.+||||||.||..|+.+++++|+.+|++.+..+   
T Consensus       185 l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t---  261 (527)
T KOG0505|consen  185 LNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKT---  261 (527)
T ss_pred             HhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhh---
Confidence            44899999999889999999999999999999999999999999999999999999999999999999999999865   


Q ss_pred             CCCCCCCCHHHHHHh
Q 001436          762 PEFPLSRTPSDLASS  776 (1078)
Q Consensus       762 ~~D~~G~TPLhlAa~  776 (1078)
                         ..|.||+.+|..
T Consensus       262 ---~~g~~p~dv~de  273 (527)
T KOG0505|consen  262 ---KMGETPLDVADE  273 (527)
T ss_pred             ---hcCCCCccchhh
Confidence               699999999875

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.74  E-value=6.9e-18  Score=174.20  Aligned_cols=189  Identities=16%  Similarity=0.017  Sum_probs=152.9

Q ss_pred             CccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHhCCCCCCccCCCCCcHH
Q 001436          620 LSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVL  699 (1078)
Q Consensus       620 ~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d~~G~TpL  699 (1078)
                      .+..|..+++.++..++  ......++.++...|..+...   ..+...+..+.+..++..+  ...-+|..|+.|.|||
T Consensus        92 t~p~g~~~~~v~ap~~s--~~k~sttltN~~rgnevs~~p---~s~~slsVhql~L~~~~~~--~~n~VN~~De~GfTpL  164 (296)
T KOG0502|consen   92 TDPEGWSALLVAAPCGS--VDKVSTTLTNGARGNEVSLMP---WSPLSLSVHQLHLDVVDLL--VNNKVNACDEFGFTPL  164 (296)
T ss_pred             CCchhhhhhhhcCCCCC--cceeeeeecccccCCcccccc---CChhhHHHHHHHHHHHHHH--hhccccCccccCchHh
Confidence            34447777777777776  366677777888888877544   3344444445454443333  3446899999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCc
Q 001436          700 HLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGH  779 (1078)
Q Consensus       700 H~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~  779 (1078)
                      .||+..|++.+|++||+.||+++...+.-.|+|.+|+..|..++|++||.++.|+|.      -|.+|-|||-+|++.||
T Consensus       165 iWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNv------yDwNGgTpLlyAvrgnh  238 (296)
T KOG0502|consen  165 IWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNV------YDWNGGTPLLYAVRGNH  238 (296)
T ss_pred             HHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcce------eccCCCceeeeeecCCh
Confidence            999999999999999999999999999999999999999999999999999999998      45799999999999999


Q ss_pred             HHHHHHHHHcCCCcccccCccCCCCCCChhHHhH---HHHHHHHHHccCC
Q 001436          780 KGISGFLAESSLTSLLLSLKMNDSADDGALEDSI---AKAVQTVSEKTAT  826 (1078)
Q Consensus       780 ~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~---~~~v~~Lle~ga~  826 (1078)
                      .+|++.||+.|++     ++..+..|.+++..|-   ...|+.+++.-+.
T Consensus       239 vkcve~Ll~sGAd-----~t~e~dsGy~~mdlAValGyr~Vqqvie~h~l  283 (296)
T KOG0502|consen  239 VKCVESLLNSGAD-----VTQEDDSGYWIMDLAVALGYRIVQQVIEKHAL  283 (296)
T ss_pred             HHHHHHHHhcCCC-----cccccccCCcHHHHHHHhhhHHHHHHHHHHHH
Confidence            9999999999964     8889999999988765   3466666665543

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.73  E-value=5.4e-17  Score=181.74  Aligned_cols=148  Identities=16%  Similarity=0.058  Sum_probs=124.2

Q ss_pred             chHHHHHHHHcCHHHHHHHHHhCCCCCCccC----CCCCcHHHHHHHcCCHHHHHHHHhCCCCcccc-CCCCchHHHHHH
Q 001436          662 YQILQKIMKEKLYSWLLRKVCEDGKGPCILD----DEGQGVLHLAASLGYDWAIKPTVTAGVSINFR-DLSGWTALHWAA  736 (1078)
Q Consensus       662 ~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d----~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~-D~~G~TpLH~Aa  736 (1078)
                      .+++++++...+...++++|++.|+++|.++    ..|.||||+|+..|+.+++++|+++||++|.+ +..|.||||+|+
T Consensus        33 ~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa  112 (300)
T PHA02884         33 IANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISV  112 (300)
T ss_pred             CCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHH
Confidence            3566666666777889999999999999874    58999999999999999999999999999996 468999999999


Q ss_pred             HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHh-HHH
Q 001436          737 YCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDS-IAK  815 (1078)
Q Consensus       737 ~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a-~~~  815 (1078)
                      ..|+.+++++|+..|++++.      +|..|.||||+|+..++..++.++...+          .+..+.+|.+.. ..+
T Consensus       113 ~~~~~eivklLL~~GAdin~------kd~~G~TpL~~A~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~n~e  176 (300)
T PHA02884        113 LHGCLKCLEILLSYGADINI------QTNDMVTPIELALMICNNFLAFMICDNE----------ISNFYKHPKKILINFD  176 (300)
T ss_pred             HcCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHhCChhHHHHhcCCc----------ccccccChhhhhccHH
Confidence            99999999999999999988      4579999999999999998886665322          344456666653 457


Q ss_pred             HHHHHHHccC
Q 001436          816 AVQTVSEKTA  825 (1078)
Q Consensus       816 ~v~~Lle~ga  825 (1078)
                      .++.|+.++.
T Consensus       177 i~~~Lish~v  186 (300)
T PHA02884        177 ILKILVSHFI  186 (300)
T ss_pred             HHHHHHHHHH
Confidence            7788888776

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.72  E-value=2.3e-17  Score=194.29  Aligned_cols=236  Identities=15%  Similarity=0.083  Sum_probs=173.4

Q ss_pred             chhhhhcCCchHHHHHHHCCCCc-----------cCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCC
Q 001436          526 CKWSCMFAEVEVPAEVLADGVLC-----------CRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYG  594 (1078)
Q Consensus       526 ~~~Ac~fG~veVv~~LLq~Gv~r-----------C~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G  594 (1078)
                      ..-||..|+++.++.||+.---+           .++-.|-.|.|.||.||.+|+  .++..  .++...+-+++.|   
T Consensus         7 l~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~--~~is~--llle~ea~ldl~d---   79 (854)
T KOG0507|consen    7 LIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQ--NQISK--LLLDYEALLDLCD---   79 (854)
T ss_pred             HHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCc--hHHHH--HHhcchhhhhhhh---
Confidence            34689999999999999853111           112235578999999998888  66666  3444334444444   


Q ss_pred             CCccHHHHHHHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCH
Q 001436          595 SSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLY  674 (1078)
Q Consensus       595 ~~~t~Lhl~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~  674 (1078)
                                                 ..|..++|+|+..++.  +.++.|+.++...|..+..+  .+++|.++. .++
T Consensus        80 ---------------------------~kg~~plhlaaw~g~~--e~vkmll~q~d~~na~~~e~--~tplhlaaq-hgh  127 (854)
T KOG0507|consen   80 ---------------------------TKGILPLHLAAWNGNL--EIVKMLLLQTDILNAVNIEN--ETPLHLAAQ-HGH  127 (854)
T ss_pred             ---------------------------ccCcceEEehhhcCcc--hHHHHHHhcccCCCcccccC--cCccchhhh-hcc
Confidence                                       3445666777777774  66666665554445444333  456655554 446


Q ss_pred             HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--------ccccCCCCchHHHHHHHcCCHHHHHH
Q 001436          675 SWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVS--------INFRDLSGWTALHWAAYCGREKTVAV  746 (1078)
Q Consensus       675 ~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gad--------in~~D~~G~TpLH~Aa~~G~~eiV~~  746 (1078)
                      ..++.+|+.+|+|+-.+|..+.|+|-+||..|..++|++|+.....        -..++..+-+|||+|+.+||.+|++.
T Consensus       128 ~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~  207 (854)
T KOG0507|consen  128 LEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQA  207 (854)
T ss_pred             hHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHH
Confidence            6788889999999999999999999999999999999988876321        23456678889999999999999999


Q ss_pred             HHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHh
Q 001436          747 LLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDS  812 (1078)
Q Consensus       747 LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a  812 (1078)
                      |++.|.++|..+       ..-|+||.|+..|..+||.+|++.|.+     ..++|..|+|++++-
T Consensus       208 ll~ag~din~~t-------~~gtalheaalcgk~evvr~ll~~gin-----~h~~n~~~qtaldil  261 (854)
T KOG0507|consen  208 LLEAGFDINYTT-------EDGTALHEAALCGKAEVVRFLLEIGIN-----THIKNQHGQTALDII  261 (854)
T ss_pred             HHhcCCCccccc-------ccchhhhhHhhcCcchhhhHHHhhccc-----cccccccchHHHHHH
Confidence            999999998866       345899999999999999999999976     556888889988763

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.72  E-value=4.9e-17  Score=167.83  Aligned_cols=137  Identities=15%  Similarity=0.162  Sum_probs=121.0

Q ss_pred             CCCCCCccCCCCCcHHHHHHHcCCH----HHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHH---HHHHHHcCCCCCC
Q 001436          684 DGKGPCILDDEGQGVLHLAASLGYD----WAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT---VAVLLSLGAAPGL  756 (1078)
Q Consensus       684 ~Gad~n~~d~~G~TpLH~Aa~~G~~----~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~ei---V~~LL~~GAdvn~  756 (1078)
                      +|++++..+..+.++||.||..|+.    +++++|++.|++++.+|..|+||||+||..|+.++   +++|+..|+++|.
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~   88 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA   88 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence            4678888899999999999999998    66678889999999999999999999999998654   8999999999988


Q ss_pred             CCCCCCCC-CCCCCHHHHHHhcCcHHHHHHHHH-cCCCcccccCccCCCCCCChhHHhH----HHHHHHHHHccCCCCCC
Q 001436          757 LTDPSPEF-PLSRTPSDLASSNGHKGISGFLAE-SSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPAND  830 (1078)
Q Consensus       757 ~~d~~~~D-~~G~TPLhlAa~~G~~~iv~~LLe-~ga~~~~adln~kd~~g~tal~~a~----~~~v~~Lle~ga~~~~~  830 (1078)
                            +| ..|.||||+|+..|+.+++++|++ .|+     +++.+|..|.||+|++.    ..+++.|++.|++.+..
T Consensus        89 ------~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~ga-----d~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~  157 (166)
T PHA02743         89 ------RELGTGNTLLHIAASTKNYELAEWLCRQLGV-----NLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDP  157 (166)
T ss_pred             ------CCCCCCCcHHHHHHHhCCHHHHHHHHhccCC-----CccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence                  44 479999999999999999999995 685     48889999999999987    47899999999987764


Q ss_pred             C
Q 001436          831 N  831 (1078)
Q Consensus       831 ~  831 (1078)
                      +
T Consensus       158 ~  158 (166)
T PHA02743        158 L  158 (166)
T ss_pred             c
Confidence            4

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.72  E-value=3.9e-17  Score=205.49  Aligned_cols=219  Identities=14%  Similarity=-0.068  Sum_probs=157.8

Q ss_pred             CCCCchHHHHHhCCCcccchhhhhhccCC--CCCCcccCCCCCCccHHHHHHHHHHHHHhCCCCCcCCccCcccHHH-HH
Q 001436          555 AVGRVPFYITCSNRLACSEVREFDYIVGS--VKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQK-LI  631 (1078)
Q Consensus       555 ~~G~TPLhvA~~ng~~cseVv~feyll~~--gadvn~~d~~G~~~t~Lhl~~rlvkLLl~~g~~~~~~~~~g~t~lh-lA  631 (1078)
                      .++..+|+.||..|.  .+.+.  .++..  +.++|..|.                              .|.+||| .|
T Consensus        15 ~~~~~~~l~A~~~g~--~~~v~--~lL~~~~~~~in~~d~------------------------------~G~t~Lh~~A   60 (743)
T TIGR00870        15 SDEEKAFLPAAERGD--LASVY--RDLEEPKKLNINCPDR------------------------------LGRSALFVAA   60 (743)
T ss_pred             CHHHHHHHHHHHcCC--HHHHH--HHhccccccCCCCcCc------------------------------cchhHHHHHH
Confidence            356778888888777  44433  22222  444554444                              4567778 55


Q ss_pred             HHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHH--HcCHHHHHHHHHhCCCC------CC----ccCCCCCcHH
Q 001436          632 SKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMK--EKLYSWLLRKVCEDGKG------PC----ILDDEGQGVL  699 (1078)
Q Consensus       632 ak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~--~~~~~~lvk~Lle~Gad------~n----~~d~~G~TpL  699 (1078)
                      +..++  .+.++.|+..+.    .  +..+.+++|.++.  ..+...++..+...+.+      ++    ..+..|.|||
T Consensus        61 ~~~~~--~eiv~lLl~~g~----~--~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpL  132 (743)
T TIGR00870        61 IENEN--LELTELLLNLSC----R--GAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITAL  132 (743)
T ss_pred             HhcCh--HHHHHHHHhCCC----C--CCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHH
Confidence            55555  588888886555    1  2234678887776  23445566666655532      11    1235699999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCccccC--------------CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCC
Q 001436          700 HLAASLGYDWAIKPTVTAGVSINFRD--------------LSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFP  765 (1078)
Q Consensus       700 H~Aa~~G~~~iv~~LL~~Gadin~~D--------------~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~  765 (1078)
                      |+||..|+.++|++|+++|++++.++              ..|.||||+|+..|+.+++++|++.|++++.      +|.
T Consensus       133 hlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~------~d~  206 (743)
T TIGR00870       133 HLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILT------ADS  206 (743)
T ss_pred             HHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhh------Hhh
Confidence            99999999999999999999999764              3699999999999999999999999999887      567


Q ss_pred             CCCCHHHHHHhcC---------cHHHHHHHHHcCCCcccccC----ccCCCCCCChhHHhHH----HHHHHHHHc
Q 001436          766 LSRTPSDLASSNG---------HKGISGFLAESSLTSLLLSL----KMNDSADDGALEDSIA----KAVQTVSEK  823 (1078)
Q Consensus       766 ~G~TPLhlAa~~G---------~~~iv~~LLe~ga~~~~adl----n~kd~~g~tal~~a~~----~~v~~Lle~  823 (1078)
                      .|+||||+|+..+         ...+.+++++.+...  .+.    ++.|..|.||+++|+.    +.++.|++.
T Consensus       207 ~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~--~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~  279 (743)
T TIGR00870       207 LGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKL--RDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAI  279 (743)
T ss_pred             hhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc--CChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHH
Confidence            9999999999987         345677777766432  223    6789999999998774    567777774

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.71  E-value=7e-17  Score=161.66  Aligned_cols=140  Identities=19%  Similarity=0.169  Sum_probs=114.5

Q ss_pred             HHHHHHHHcCHHHHHHHHHhCCC-CCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHH
Q 001436          664 ILQKIMKEKLYSWLLRKVCEDGK-GPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK  742 (1078)
Q Consensus       664 ~L~~aa~~~~~~~lvk~Lle~Ga-d~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~e  742 (1078)
                      .++.++. ++....|+.|++..+ .+|.+|.+|.||||-|+.+||.+||..|+..||+++.+...||||||-||..++.+
T Consensus        66 l~lwaae-~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~  144 (228)
T KOG0512|consen   66 LLLWAAE-KNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFE  144 (228)
T ss_pred             HHHHHHh-hccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchh
Confidence            3444444 444445666666554 59999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCc-HHHHHHHHHc-CCCcccccCccCCCCCCChhHHhHHH
Q 001436          743 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGH-KGISGFLAES-SLTSLLLSLKMNDSADDGALEDSIAK  815 (1078)
Q Consensus       743 iV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~-~~iv~~LLe~-ga~~~~adln~kd~~g~tal~~a~~~  815 (1078)
                      |+..||++|+|+|+.+      ....||||+||...+ ...+.+|+.. ++.     .-.++..+.||+.+|...
T Consensus       145 va~~LLqhgaDVnA~t------~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~-----pg~~nn~eeta~~iARRT  208 (228)
T KOG0512|consen  145 VAGRLLQHGADVNAQT------KGLLTPLHLAAGNRNSRDTLELLLHDRYIH-----PGLKNNLEETAFDIARRT  208 (228)
T ss_pred             HHHHHHhccCcccccc------cccchhhHHhhcccchHHHHHHHhhccccC-----hhhhcCccchHHHHHHHh
Confidence            9999999999999977      478999999998766 4456666643 433     445777789999988744

>PHA02741 hypothetical protein; Provisional

Probab=99.71  E-value=9.8e-17  Score=165.90  Aligned_cols=99  Identities=26%  Similarity=0.235  Sum_probs=46.7

Q ss_pred             CCCCccCCCCCcHHHHHHHcCC----HHHHHHHHhCCCCccccCC-CCchHHHHHHHcCCHHHHHHHHH-cCCCCCCCCC
Q 001436          686 KGPCILDDEGQGVLHLAASLGY----DWAIKPTVTAGVSINFRDL-SGWTALHWAAYCGREKTVAVLLS-LGAAPGLLTD  759 (1078)
Q Consensus       686 ad~n~~d~~G~TpLH~Aa~~G~----~~iv~~LL~~Gadin~~D~-~G~TpLH~Aa~~G~~eiV~~LL~-~GAdvn~~~d  759 (1078)
                      ++++.+|..|+||||+|+..|+    .+++++|+.+|+++|.+|. .|+||||+|+..|+.+++++|+. .|++++.   
T Consensus        51 a~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~---  127 (169)
T PHA02741         51 AALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHF---  127 (169)
T ss_pred             hhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc---
Confidence            4444444444455555444444    2444444444444444442 44455555554445454444444 2444443   


Q ss_pred             CCCCCCCCCCHHHHHHhcCcHHHHHHHHHcC
Q 001436          760 PSPEFPLSRTPSDLASSNGHKGISGFLAESS  790 (1078)
Q Consensus       760 ~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~g  790 (1078)
                         +|..|.||||+|+..|+.+++++|++.+
T Consensus       128 ---~n~~g~tpL~~A~~~~~~~iv~~L~~~~  155 (169)
T PHA02741        128 ---CNADNKSPFELAIDNEDVAMMQILREIV  155 (169)
T ss_pred             ---CCCCCCCHHHHHHHCCCHHHHHHHHHHH
Confidence               2234445555555444444444444443

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.69  E-value=9.1e-17  Score=176.21  Aligned_cols=108  Identities=27%  Similarity=0.293  Sum_probs=95.1

Q ss_pred             HHHHHHHHhCCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHc-CC
Q 001436          675 SWLLRKVCEDGKGPCILD-DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL-GA  752 (1078)
Q Consensus       675 ~~lvk~Lle~Gad~n~~d-~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~-GA  752 (1078)
                      ..+|..|...| |||++- ..|+|+|++|+.+|..++|+.||..|||||.+|.+|.|+|++||.+||.+||++||.. ++
T Consensus       320 ~~vV~~LF~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~c  398 (452)
T KOG0514|consen  320 RTVVERLFKMG-DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSC  398 (452)
T ss_pred             HHHHHHHHhcc-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcc
Confidence            34566677665 788874 6799999999999999999999999999999999999999999999999999999975 46


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHc
Q 001436          753 APGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAES  789 (1078)
Q Consensus       753 dvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~  789 (1078)
                      |+.+      .|.+|.|+|.+|...||.+|.-+|..+
T Consensus       399 d~sL------tD~DgSTAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  399 DISL------TDVDGSTALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             ccee------ecCCCchhhhhHHhcCchHHHHHHHHH
Confidence            6554      568999999999999999999888754

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.68  E-value=1.9e-17  Score=198.03  Aligned_cols=270  Identities=16%  Similarity=0.091  Sum_probs=220.9

Q ss_pred             CCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHH-----HHHHHHHHHhCC-CCCcCCccCcccHHHH
Q 001436          557 GRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-----HLRLERILSMRS-SPQNHLSEGLCEKQKL  630 (1078)
Q Consensus       557 G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl-----~~rlvkLLl~~g-~~~~~~~~~g~t~lhl  630 (1078)
                      =.|+|.+||.+|+  .++++  +++..|+++...|+.|  .+++-+     |..+++.|+... +.....+..+.++|.+
T Consensus       757 ~~t~LT~acaggh--~e~ve--llv~rganiehrdkkg--f~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSl  830 (2131)
T KOG4369|consen  757 IKTNLTSACAGGH--REEVE--LLVVRGANIEHRDKKG--FVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSL  830 (2131)
T ss_pred             ccccccccccCcc--HHHHH--HHHHhccccccccccc--chhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEE
Confidence            4799999999999  77776  6778889999999988  777766     889999999888 6667788889999999


Q ss_pred             HHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHhCCCCCCccC--CCCCcHHHHHHHcCCH
Q 001436          631 ISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILD--DEGQGVLHLAASLGYD  708 (1078)
Q Consensus       631 Aak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d--~~G~TpLH~Aa~~G~~  708 (1078)
                      ++.-+.  .++++.||..+++....+..   +.+....+..+++..+++.|+..|+.||.+.  +.|-.||++|+.+||.
T Consensus       831 acsggr--~~vvelLl~~gankehrnvs---DytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~  905 (2131)
T KOG4369|consen  831 ACSGGR--TRVVELLLNAGANKEHRNVS---DYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQ  905 (2131)
T ss_pred             ecCCCc--chHHHHHHHhhccccccchh---hcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhcccc
Confidence            999998  59999999888877766543   3566677788999999999999999999875  6799999999999999


Q ss_pred             HHHHHHHhCCCCcccc-CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHH
Q 001436          709 WAIKPTVTAGVSINFR-DLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLA  787 (1078)
Q Consensus       709 ~iv~~LL~~Gadin~~-D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LL  787 (1078)
                      ..++.||+.|-|||.. ..+-+|+|-+|+..|+.++|.+||.+.+++..      +-+.|.|||+-++..|..++-.+||
T Consensus       906 ~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anveh------Raktgltplme~AsgGyvdvg~~li  979 (2131)
T KOG4369|consen  906 AATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEH------RAKTGLTPLMEMASGGYVDVGNLLI  979 (2131)
T ss_pred             HHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhh------hcccCCcccchhhcCCccccchhhh
Confidence            9999999999999985 35678999999999999999999999998877      4479999999999999999999999


Q ss_pred             HcCCCcccccC-ccCCCCCCChhHHhHHHHHHHHHHccCCCCCCCCCcchhcccchHHHHHHHHH
Q 001436          788 ESSLTSLLLSL-KMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQ  851 (1078)
Q Consensus       788 e~ga~~~~adl-n~kd~~g~tal~~a~~~~v~~Lle~ga~~~~~~~~e~~lslkdsltAl~~Aaq  851 (1078)
                      .+|++.+.+-+ +.+|...-.|+.-++.+-+..|+...|.+        ++..|.+.++|+.|+.
T Consensus       980 ~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv--------~v~NkkG~T~Lwla~~ 1036 (2131)
T KOG4369|consen  980 AAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATV--------RVPNKKGCTVLWLASA 1036 (2131)
T ss_pred             hcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccce--------ecccCCCCcccchhcc
Confidence            99987554322 33343333334444455666666555543        4456788888888765

>PHA02741 hypothetical protein; Provisional

Probab=99.68  E-value=3e-16  Score=162.25  Aligned_cols=130  Identities=21%  Similarity=0.205  Sum_probs=113.9

Q ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHh------CCCCccccCCCCchHHHHHHHcCC----HHHHHHHHHcCCCCCCC
Q 001436          688 PCILDDEGQGVLHLAASLGYDWAIKPTVT------AGVSINFRDLSGWTALHWAAYCGR----EKTVAVLLSLGAAPGLL  757 (1078)
Q Consensus       688 ~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~------~Gadin~~D~~G~TpLH~Aa~~G~----~eiV~~LL~~GAdvn~~  757 (1078)
                      ++.+|..|.||||+||..|+.++++.|+.      .|++++.+|..|+||||+|+..|+    .+++++|+..|+++|. 
T Consensus        14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~-   92 (169)
T PHA02741         14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINA-   92 (169)
T ss_pred             hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC-
Confidence            45678899999999999999999998853      478999999999999999999999    5899999999999987 


Q ss_pred             CCCCCCCC-CCCCHHHHHHhcCcHHHHHHHHH-cCCCcccccCccCCCCCCChhHHhH----HHHHHHHHHccCCCC
Q 001436          758 TDPSPEFP-LSRTPSDLASSNGHKGISGFLAE-SSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPA  828 (1078)
Q Consensus       758 ~d~~~~D~-~G~TPLhlAa~~G~~~iv~~LLe-~ga~~~~adln~kd~~g~tal~~a~----~~~v~~Lle~ga~~~  828 (1078)
                           +|. .|.||||+|+..++.+++++|+. .|++...     +|..|.||+++|.    ..+++.|.+.++...
T Consensus        93 -----~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~-----~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~~  159 (169)
T PHA02741         93 -----QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHF-----CNADNKSPFELAIDNEDVAMMQILREIVATSR  159 (169)
T ss_pred             -----CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc-----CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHhc
Confidence                 443 89999999999999999999998 5999998     4567999999977    478888888887643

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.67  E-value=4.2e-17  Score=173.59  Aligned_cols=131  Identities=23%  Similarity=0.210  Sum_probs=118.8

Q ss_pred             HHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 001436          681 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDP  760 (1078)
Q Consensus       681 Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~  760 (1078)
                      |-+..-|.|.-|..|.+||||||..|+..+++.||..|+.+|..+...-||||+||..||.++|+.||+..+|+|+++  
T Consensus        20 ld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavn--   97 (448)
T KOG0195|consen   20 LDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVN--   97 (448)
T ss_pred             ecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhh--
Confidence            334456788889999999999999999999999999999999999999999999999999999999999999999966  


Q ss_pred             CCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHHHHHHHHHH
Q 001436          761 SPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSE  822 (1078)
Q Consensus       761 ~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~~~v~~Lle  822 (1078)
                          ..|.||||+||.-|...|++-|+..|+.     +++-++.|.||++.|.....+.|.+
T Consensus        98 ----ehgntplhyacfwgydqiaedli~~ga~-----v~icnk~g~tpldkakp~l~~~l~e  150 (448)
T KOG0195|consen   98 ----EHGNTPLHYACFWGYDQIAEDLISCGAA-----VNICNKKGMTPLDKAKPMLKNTLLE  150 (448)
T ss_pred             ----ccCCCchhhhhhhcHHHHHHHHHhccce-----eeecccCCCCchhhhchHHHHHHHH
Confidence                5999999999999999999999999965     8899999999999988665555553

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.66  E-value=2.4e-16  Score=160.07  Aligned_cols=97  Identities=19%  Similarity=0.180  Sum_probs=89.2

Q ss_pred             ccCCCCCcHHHHHHHcCCHH---HHHHHHhCCCCccccC-CCCchHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCC
Q 001436          690 ILDDEGQGVLHLAASLGYDW---AIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLLS-LGAAPGLLTDPSPEF  764 (1078)
Q Consensus       690 ~~d~~G~TpLH~Aa~~G~~~---iv~~LL~~Gadin~~D-~~G~TpLH~Aa~~G~~eiV~~LL~-~GAdvn~~~d~~~~D  764 (1078)
                      .+|..|+||||+||..|+.+   ++++|++.|+++|.+| ..|+||||+|+..|+.+++++|+. .|++++.      +|
T Consensus        50 ~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~------~~  123 (154)
T PHA02736         50 EYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEI------LN  123 (154)
T ss_pred             HhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcc------cc
Confidence            46889999999999999874   6889999999999998 599999999999999999999998 5999887      55


Q ss_pred             CCCCCHHHHHHhcCcHHHHHHHHHcCCC
Q 001436          765 PLSRTPSDLASSNGHKGISGFLAESSLT  792 (1078)
Q Consensus       765 ~~G~TPLhlAa~~G~~~iv~~LLe~ga~  792 (1078)
                      ..|.||||+|+..|+.+++++|++.|++
T Consensus       124 ~~g~tpL~~A~~~~~~~i~~~Ll~~ga~  151 (154)
T PHA02736        124 YAFKTPYYVACERHDAKMMNILRAKGAQ  151 (154)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            7999999999999999999999999976

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.66  E-value=6.4e-16  Score=177.52  Aligned_cols=154  Identities=23%  Similarity=0.286  Sum_probs=119.3

Q ss_pred             cCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcC
Q 001436          672 KLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG  751 (1078)
Q Consensus       672 ~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~G  751 (1078)
                      .+...=++.|+..|+++|..+.+|.|+||-+|.-.+.+||++|+++|++||..|..||||||-|+..||..++.+||.+|
T Consensus        50 ~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~g  129 (527)
T KOG0505|consen   50 RGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHG  129 (527)
T ss_pred             cccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhh
Confidence            33333456677777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             CCCCCCC-----------------------------------------------------CCCCCCCCCCCHHHHHHhcC
Q 001436          752 AAPGLLT-----------------------------------------------------DPSPEFPLSRTPSDLASSNG  778 (1078)
Q Consensus       752 Advn~~~-----------------------------------------------------d~~~~D~~G~TPLhlAa~~G  778 (1078)
                      |++.+++                                                     +...++..|-|+||+|+.+|
T Consensus       130 A~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~G  209 (527)
T KOG0505|consen  130 ANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANG  209 (527)
T ss_pred             hhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhh
Confidence            7665543                                                     12235566999999999999


Q ss_pred             cHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH----HHHHHHHHHccCCCCCC
Q 001436          779 HKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPAND  830 (1078)
Q Consensus       779 ~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~----~~~v~~Lle~ga~~~~~  830 (1078)
                      ..+++++|+++|..     ++++|..|+||+|.++    ....+.|+++|++....
T Consensus       210 y~e~~~lLl~ag~~-----~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~  260 (527)
T KOG0505|consen  210 YTEVAALLLQAGYS-----VNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAK  260 (527)
T ss_pred             HHHHHHHHHHhccC-----cccccccCCCcccHHHHhhhHhHHHHHHHhhcccchh
Confidence            99999999999965     8889999999999876    56677888898876553

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.65  E-value=3.3e-16  Score=184.67  Aligned_cols=221  Identities=19%  Similarity=0.165  Sum_probs=181.3

Q ss_pred             ccchhhhhcCCchHHHHHHHCCCCccCCCCCCCCCchHHHHHhCCCcccchhhhhhccCCCCCCcccCCCCCCccHHHH-
Q 001436          524 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-  602 (1078)
Q Consensus       524 ~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~TPLhvA~~ng~~cseVv~feyll~~gadvn~~d~~G~~~t~Lhl-  602 (1078)
                      +.++.|||.|+.++++.|++....  +..++..|.+|||+|+-+|+  .++++..  +.++..+|+....|  .+++|+ 
T Consensus        51 Talhha~Lng~~~is~llle~ea~--ldl~d~kg~~plhlaaw~g~--~e~vkml--l~q~d~~na~~~e~--~tplhla  122 (854)
T KOG0507|consen   51 TLLHHAVLNGQNQISKLLLDYEAL--LDLCDTKGILPLHLAAWNGN--LEIVKML--LLQTDILNAVNIEN--ETPLHLA  122 (854)
T ss_pred             hHHHHHHhcCchHHHHHHhcchhh--hhhhhccCcceEEehhhcCc--chHHHHH--HhcccCCCcccccC--cCccchh
Confidence            346789999999999999999887  55566899999999999999  8888844  44457778877776  888887 


Q ss_pred             ----HHHHHHHHHhCCCCCcCCccCcccHHHHHHHhccchhHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHH
Q 001436          603 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLL  678 (1078)
Q Consensus       603 ----~~rlvkLLl~~g~~~~~~~~~g~t~lhlAak~~~l~~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv  678 (1078)
                          |.+++.||+..+++....++.+.+++.+|++++..  ++++.|+..     ..                     ++
T Consensus       123 aqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~--~Vvq~ll~~-----~~---------------------~~  174 (854)
T KOG0507|consen  123 AQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRA--EVVQMLLQK-----KF---------------------PV  174 (854)
T ss_pred             hhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhh--HHHHHHhhh-----cc---------------------ch
Confidence                88999999999999999999999999999999994  888888733     00                     01


Q ss_pred             HHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 001436          679 RKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT  758 (1078)
Q Consensus       679 k~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~  758 (1078)
                      .++...|  -..++..+.+|||+|+++||.++++.|+++|.++|.....| |+||-|+.+|..+||.+|++.|.+..+  
T Consensus       175 ~~~~~~~--~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~--  249 (854)
T KOG0507|consen  175 QSSLRVG--DIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHI--  249 (854)
T ss_pred             hhcccCC--CCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhcccccc--
Confidence            1122334  34577889999999999999999999999999999998887 899999999999999999999999887  


Q ss_pred             CCCCCCCCCCCHHHHHHhc---CcHHHHHHHHHc
Q 001436          759 DPSPEFPLSRTPSDLASSN---GHKGISGFLAES  789 (1078)
Q Consensus       759 d~~~~D~~G~TPLhlAa~~---G~~~iv~~LLe~  789 (1078)
                          +|.+|+|+|++-...   -..+++.++.+.
T Consensus       250 ----~n~~~qtaldil~d~~~~~~~ei~ga~~~~  279 (854)
T KOG0507|consen  250 ----KNQHGQTALDIIIDLQENRRYEIAGAVKNF  279 (854)
T ss_pred             ----ccccchHHHHHHHhcchhhhhhhhhhhhcc
Confidence                567999999986653   234566666543

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.64  E-value=6.6e-16  Score=156.82  Aligned_cols=128  Identities=16%  Similarity=0.148  Sum_probs=105.0

Q ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHhCCC--C-----ccccCCCCchHHHHHHHcCCH---HHHHHHHHcCCCCCCC
Q 001436          688 PCILDDEGQGVLHLAASLGYDWAIKPTVTAGV--S-----INFRDLSGWTALHWAAYCGRE---KTVAVLLSLGAAPGLL  757 (1078)
Q Consensus       688 ~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Ga--d-----in~~D~~G~TpLH~Aa~~G~~---eiV~~LL~~GAdvn~~  757 (1078)
                      ++.+|..|.||||+||..|+.  +.+++..++  +     ++.+|..|+||||+|+..|+.   +++++|++.|++++..
T Consensus        10 ~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~   87 (154)
T PHA02736         10 ASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK   87 (154)
T ss_pred             HHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc
Confidence            456788999999999999983  344433322  2     345789999999999999987   4689999999999884


Q ss_pred             CCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHc-CCCcccccCccCCCCCCChhHHhH----HHHHHHHHHccCCC
Q 001436          758 TDPSPEFPLSRTPSDLASSNGHKGISGFLAES-SLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATP  827 (1078)
Q Consensus       758 ~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~-ga~~~~adln~kd~~g~tal~~a~----~~~v~~Lle~ga~~  827 (1078)
                      ++     ..|.||||+|+..|+.+++++|+.. |+     +++.+|..|.||+++|.    .++++.|++.|++.
T Consensus        88 ~~-----~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~-----d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~  152 (154)
T PHA02736         88 ER-----VFGNTPLHIAVYTQNYELATWLCNQPGV-----NMEILNYAFKTPYYVACERHDAKMMNILRAKGAQC  152 (154)
T ss_pred             CC-----CCCCcHHHHHHHhCCHHHHHHHHhCCCC-----CCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            31     4899999999999999999999974 74     48889999999999987    47788888888764

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.62  E-value=2.7e-15  Score=168.20  Aligned_cols=117  Identities=14%  Similarity=0.083  Sum_probs=103.5

Q ss_pred             ccCCCCCcH-HHHHHHcCCHHHHHHHHhCCCCccccC----CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 001436          690 ILDDEGQGV-LHLAASLGYDWAIKPTVTAGVSINFRD----LSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEF  764 (1078)
Q Consensus       690 ~~d~~G~Tp-LH~Aa~~G~~~iv~~LL~~Gadin~~D----~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D  764 (1078)
                      .+|..|.|+ ||.|+..|+.+++++|+++|+++|.++    ..|.||||+|+..|+.+++++|+++||++|..+     +
T Consensus        27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~-----~  101 (300)
T PHA02884         27 KKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYA-----E  101 (300)
T ss_pred             ccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCccc-----C
Confidence            477788765 566777799999999999999999974    689999999999999999999999999999843     2


Q ss_pred             CCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHHHH
Q 001436          765 PLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKA  816 (1078)
Q Consensus       765 ~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~~~  816 (1078)
                      ..|.||||+|+..|+.+++++|++.|++     ++.+|..|.||++.|...+
T Consensus       102 ~~g~TpLh~Aa~~~~~eivklLL~~GAd-----in~kd~~G~TpL~~A~~~~  148 (300)
T PHA02884        102 EAKITPLYISVLHGCLKCLEILLSYGAD-----INIQTNDMVTPIELALMIC  148 (300)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHhC
Confidence            5799999999999999999999999954     8889999999999987543

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.60  E-value=2.5e-15  Score=165.02  Aligned_cols=159  Identities=19%  Similarity=0.172  Sum_probs=127.3

Q ss_pred             hHHHHHHHhhcCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHhCC-CCCCccCCCCCcHHHHHHHcC-----CHHHHH
Q 001436          639 EEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDG-KGPCILDDEGQGVLHLAASLG-----YDWAIK  712 (1078)
Q Consensus       639 ~~~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~G-ad~n~~d~~G~TpLH~Aa~~G-----~~~iv~  712 (1078)
                      ...+.|.+ +.+|.|       ++|.||+++...+. .+|+.|++.| +++|.+|+-|.||+++|+...     +..+|.
T Consensus       254 ~~lL~yvV-NlaDsN-------GNTALHYsVSHaNF-~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~  324 (452)
T KOG0514|consen  254 PPLLEYVV-NLADSN-------GNTALHYAVSHANF-DVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVE  324 (452)
T ss_pred             hHHHHHHh-hhhcCC-------CCeeeeeeecccch-HHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHH
Confidence            35556665 444333       34678777765554 5678888876 899999999999999998653     567787


Q ss_pred             HHHhCCCCccccC-CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCC
Q 001436          713 PTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSL  791 (1078)
Q Consensus       713 ~LL~~Gadin~~D-~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga  791 (1078)
                      -|...| |||.+- ..|.|+|++|+.+|+.++|+.||..|||+|+      +|.+|.|+|++||.+||++|+++||... 
T Consensus       325 ~LF~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNi------QDdDGSTALMCA~EHGhkEivklLLA~p-  396 (452)
T KOG0514|consen  325 RLFKMG-DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNI------QDDDGSTALMCAAEHGHKEIVKLLLAVP-  396 (452)
T ss_pred             HHHhcc-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCcc------ccCCccHHHhhhhhhChHHHHHHHhccC-
Confidence            777665 788765 6899999999999999999999999999998      5679999999999999999999999753 


Q ss_pred             CcccccCccCCCCCCChhHHhHHHHH
Q 001436          792 TSLLLSLKMNDSADDGALEDSIAKAV  817 (1078)
Q Consensus       792 ~~~~adln~kd~~g~tal~~a~~~~v  817 (1078)
                         ..|+.+.|..|.||+.+|-..+.
T Consensus       397 ---~cd~sLtD~DgSTAl~IAleagh  419 (452)
T KOG0514|consen  397 ---SCDISLTDVDGSTALSIALEAGH  419 (452)
T ss_pred             ---cccceeecCCCchhhhhHHhcCc
Confidence               24678899999999988765443

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.58  E-value=9.5e-15  Score=134.20  Aligned_cols=84  Identities=35%  Similarity=0.353  Sum_probs=71.9

Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcC
Q 001436          699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNG  778 (1078)
Q Consensus       699 LH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G  778 (1078)
                      ||+||..|+.++++.|++.|.+++.    |.||||+||..|+.+++++|++.|++++.      +|..|+||||+|+.+|
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~   70 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINS------QDKNGNTALHYAAENG   70 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-------BSTTSSBHHHHHHHTT
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccc------cCCCCCCHHHHHHHcC
Confidence            7889999999999999998888877    88899999999999999999999988877      4468999999999999


Q ss_pred             cHHHHHHHHHcCCC
Q 001436          779 HKGISGFLAESSLT  792 (1078)
Q Consensus       779 ~~~iv~~LLe~ga~  792 (1078)
                      +.+++++|+++|++
T Consensus        71 ~~~~~~~Ll~~g~~   84 (89)
T PF12796_consen   71 NLEIVKLLLEHGAD   84 (89)
T ss_dssp             HHHHHHHHHHTTT-
T ss_pred             CHHHHHHHHHcCCC
Confidence            99999999988865

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.50  E-value=5.1e-14  Score=150.33  Aligned_cols=125  Identities=21%  Similarity=0.196  Sum_probs=107.1

Q ss_pred             chHHHHHHHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCH
Q 001436          662 YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE  741 (1078)
Q Consensus       662 ~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~  741 (1078)
                      -.++|.+|++ ++..+++.|+.+|+.+|..+....||||+||.+||-++|+.||...+|+|+.+..|.|||||||..|..
T Consensus        35 fsplhwaake-gh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgyd  113 (448)
T KOG0195|consen   35 FSPLHWAAKE-GHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYD  113 (448)
T ss_pred             cchhhhhhhc-ccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHH
Confidence            3677777664 577899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCc
Q 001436          742 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTS  793 (1078)
Q Consensus       742 eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~  793 (1078)
                      .+++-|+..||.+++.      ++.|.|||+.|.-.-...+.++--++|-.+
T Consensus       114 qiaedli~~ga~v~ic------nk~g~tpldkakp~l~~~l~e~aek~gq~~  159 (448)
T KOG0195|consen  114 QIAEDLISCGAAVNIC------NKKGMTPLDKAKPMLKNTLLEIAEKHGQSP  159 (448)
T ss_pred             HHHHHHHhccceeeec------ccCCCCchhhhchHHHHHHHHHHHHhCCCC
Confidence            9999999999999984      479999999986543333444444456443

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.50  E-value=1.2e-13  Score=126.95  Aligned_cols=87  Identities=31%  Similarity=0.327  Sum_probs=77.5

Q ss_pred             HHHHHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHH
Q 001436          666 QKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVA  745 (1078)
Q Consensus       666 ~~aa~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~  745 (1078)
                      |.++ ..+...+++.|++.+.+++.    |.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus         2 ~~A~-~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~   76 (89)
T PF12796_consen    2 HIAA-QNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK   76 (89)
T ss_dssp             HHHH-HTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred             HHHH-HcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            4444 45567789999999988886    999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCC
Q 001436          746 VLLSLGAAPGLL  757 (1078)
Q Consensus       746 ~LL~~GAdvn~~  757 (1078)
                      +|+++|++++..
T Consensus        77 ~Ll~~g~~~~~~   88 (89)
T PF12796_consen   77 LLLEHGADVNIR   88 (89)
T ss_dssp             HHHHTTT-TTSS
T ss_pred             HHHHcCCCCCCc
Confidence            999999999873

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.47  E-value=2.3e-13  Score=136.73  Aligned_cols=105  Identities=24%  Similarity=0.188  Sum_probs=96.5

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCC-CccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHh
Q 001436          698 VLHLAASLGYDWAIKPTVTAGV-SINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS  776 (1078)
Q Consensus       698 pLH~Aa~~G~~~iv~~LL~~Ga-din~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~  776 (1078)
                      .+-+|+..+....|+.||+-.+ .+|.+|.+|+||||-|+++||.+||..|+..||++++++      ..|+||||-||.
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T------~~GWTPLhSAck  139 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKT------NEGWTPLHSACK  139 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCccccc------ccCccchhhhhc
Confidence            4678999999999999998766 589999999999999999999999999999999999976      599999999999


Q ss_pred             cCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH
Q 001436          777 NGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI  813 (1078)
Q Consensus       777 ~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~  813 (1078)
                      -++.+|+.+||.+|+     |+|....-..||||+++
T Consensus       140 WnN~~va~~LLqhga-----DVnA~t~g~ltpLhlaa  171 (228)
T KOG0512|consen  140 WNNFEVAGRLLQHGA-----DVNAQTKGLLTPLHLAA  171 (228)
T ss_pred             ccchhHHHHHHhccC-----cccccccccchhhHHhh
Confidence            999999999999995     58888886799999976

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.45  E-value=1.3e-12  Score=124.25  Aligned_cols=113  Identities=30%  Similarity=0.349  Sum_probs=74.6

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCH
Q 001436          691 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTP  770 (1078)
Q Consensus       691 ~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TP  770 (1078)
                      +|..|.||||+|+..|+.++++.|+..|.+++.++..|.||||+|+..+..++++.|+..|++++.      .+..|.||
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~------~~~~~~~~   76 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA------RDKDGNTP   76 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc------cCCCCCCH
Confidence            445667777777777777777777777766666666777777777777777777777776665544      33566677


Q ss_pred             HHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHH
Q 001436          771 SDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA  814 (1078)
Q Consensus       771 LhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~  814 (1078)
                      +|+|+..++.+++++|+..|.     +++..+..+.||++.+..
T Consensus        77 l~~a~~~~~~~~~~~L~~~~~-----~~~~~~~~~~~~l~~~~~  115 (126)
T cd00204          77 LHLAARNGNLDVVKLLLKHGA-----DVNARDKDGRTPLHLAAK  115 (126)
T ss_pred             HHHHHHcCcHHHHHHHHHcCC-----CCcccCCCCCCHHHHHHh
Confidence            777777777777777776663     255566666666666543

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.40  E-value=1.9e-12  Score=135.44  Aligned_cols=122  Identities=30%  Similarity=0.334  Sum_probs=108.3

Q ss_pred             chHHHHHHHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCC-----HHHHHHHHhCCC---CccccCCCCchHHH
Q 001436          662 YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGY-----DWAIKPTVTAGV---SINFRDLSGWTALH  733 (1078)
Q Consensus       662 ~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~-----~~iv~~LL~~Ga---din~~D~~G~TpLH  733 (1078)
                      ..+++.++.. +...++..++..|++++.+|..|.||||+|+..|+     .++++.||+.|+   ..+.+|..|+||||
T Consensus        74 ~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~  152 (235)
T COG0666          74 RLPLHSAASK-GDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLH  152 (235)
T ss_pred             cCHHHHHHHc-CcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhH
Confidence            3455555444 44456688999999999999999999999999999     999999999999   66667999999999


Q ss_pred             HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcC
Q 001436          734 WAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESS  790 (1078)
Q Consensus       734 ~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~g  790 (1078)
                      +|+..|+.+++++|+..|++++.      ++..|.||+++|+..|+..++..|+..+
T Consensus       153 ~A~~~~~~~~~~~ll~~~~~~~~------~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         153 WAALNGDADIVELLLEAGADPNS------RNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             HHHHcCchHHHHHHHhcCCCCcc------cccCCCcchhhhcccchHHHHHHHHhcC
Confidence            99999999999999999999988      4579999999999999999999999976

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.40  E-value=1e-12  Score=119.65  Aligned_cols=111  Identities=21%  Similarity=0.238  Sum_probs=74.9

Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcC
Q 001436          699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNG  778 (1078)
Q Consensus       699 LH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G  778 (1078)
                      +.|+..+|..+-|+-.+..|.++|..- .|+||||+||-+|..+++++|+..||+++.      +|+.|-|||--|+..|
T Consensus         6 ~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~------kDKygITPLLsAvwEG   78 (117)
T KOG4214|consen    6 VAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQD------KDKYGITPLLSAVWEG   78 (117)
T ss_pred             HhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCC------ccccCCcHHHHHHHHh
Confidence            566777777777777777776666543 677777777777777777777777777766      5567777777777777


Q ss_pred             cHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHHHHHHHHH
Q 001436          779 HKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVS  821 (1078)
Q Consensus       779 ~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~~~v~~Ll  821 (1078)
                      |.+||++||..|++     -.++...|.+.++....+.++.|+
T Consensus        79 H~~cVklLL~~GAd-----rt~~~PdG~~~~eate~edIr~LL  116 (117)
T KOG4214|consen   79 HRDCVKLLLQNGAD-----RTIHAPDGTALIEATEEEDIRELL  116 (117)
T ss_pred             hHHHHHHHHHcCcc-----cceeCCCchhHHhhccHHHHHHHh
Confidence            77777777777754     444555566655555444444443

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.39  E-value=6.6e-12  Score=119.34  Aligned_cols=119  Identities=31%  Similarity=0.332  Sum_probs=108.1

Q ss_pred             chHHHHHHHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCH
Q 001436          662 YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE  741 (1078)
Q Consensus       662 ~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~  741 (1078)
                      .++++.++..+ ...+++.|++.|.+++..+..|.||||+|+..+..++++.|+..|++++..+..|.||+|+|+..++.
T Consensus         8 ~t~l~~a~~~~-~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~   86 (126)
T cd00204           8 RTPLHLAASNG-HLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNL   86 (126)
T ss_pred             CCHHHHHHHcC-cHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcH
Confidence            47777777655 45778999999999899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHH
Q 001436          742 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLA  787 (1078)
Q Consensus       742 eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LL  787 (1078)
                      +++++|+..|.+++.      .|..|.||+++|...++.+++++|+
T Consensus        87 ~~~~~L~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          87 DVVKLLLKHGADVNA------RDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HHHHHHHHcCCCCcc------cCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            999999999977766      5578999999999999999999884

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.34  E-value=2.3e-12  Score=146.64  Aligned_cols=116  Identities=26%  Similarity=0.252  Sum_probs=102.7

Q ss_pred             HHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHH
Q 001436          669 MKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLL  748 (1078)
Q Consensus       669 a~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL  748 (1078)
                      +.-.|...+|+.++..--|+...+..|.|+||-|+..||.+||++||+.|+|||..|.+||||||+||.++++.+++.|+
T Consensus       557 aaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLV  636 (752)
T KOG0515|consen  557 AALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLV  636 (752)
T ss_pred             hhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHH
Confidence            34445667788888877899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCCCCCCCCCCCCCCCHHHHHH--hcCcHHHHHHHHHc
Q 001436          749 SLGAAPGLLTDPSPEFPLSRTPSDLAS--SNGHKGISGFLAES  789 (1078)
Q Consensus       749 ~~GAdvn~~~d~~~~D~~G~TPLhlAa--~~G~~~iv~~LLe~  789 (1078)
                      +.|+.+-+.+-     .++.||..-+-  ..|+.+|.+||...
T Consensus       637 e~GaavfAsTl-----SDmeTa~eKCee~eeGY~~CsqyL~~v  674 (752)
T KOG0515|consen  637 ESGAAVFASTL-----SDMETAAEKCEEMEEGYDQCSQYLYGV  674 (752)
T ss_pred             hccceEEeeec-----ccccchhhhcchhhhhHHHHHHHHHHH
Confidence            99999988664     67899988764  45889999999753

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.33  E-value=4e-11  Score=125.40  Aligned_cols=120  Identities=29%  Similarity=0.283  Sum_probs=106.7

Q ss_pred             CCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCC-----HHHHHHHHHcCC--CCCCCCC
Q 001436          687 GPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGR-----EKTVAVLLSLGA--APGLLTD  759 (1078)
Q Consensus       687 d~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~-----~eiV~~LL~~GA--dvn~~~d  759 (1078)
                      .....+..+.+++|.++..+...++.+|+..|++++.+|..|.||||+|+..|+     .+++++||+.|+  +++.   
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~---  141 (235)
T COG0666          65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNN---  141 (235)
T ss_pred             ccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCcc---
Confidence            344567779999999999999999999999999999999999999999999999     999999999999  3332   


Q ss_pred             CCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHHHH
Q 001436          760 PSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKA  816 (1078)
Q Consensus       760 ~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~~~  816 (1078)
                        .+|..|.||||+|+..|+.+++++|++.|++     ++..+..|.|+++.+....
T Consensus       142 --~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~-----~~~~~~~g~t~l~~a~~~~  191 (235)
T COG0666         142 --LRDEDGNTPLHWAALNGDADIVELLLEAGAD-----PNSRNSYGVTALDPAAKNG  191 (235)
T ss_pred             --ccCCCCCchhHHHHHcCchHHHHHHHhcCCC-----CcccccCCCcchhhhcccc
Confidence              2578999999999999999999999999865     7778888999999877443

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.28  E-value=2e-11  Score=146.71  Aligned_cols=125  Identities=22%  Similarity=0.167  Sum_probs=108.7

Q ss_pred             ccchHHHHHHHHcCHHHHHHHHHhCCCCCCcc---------CC--------------CCCcHHHHHHHcCCHHHHHHHHh
Q 001436          660 EKYQILQKIMKEKLYSWLLRKVCEDGKGPCIL---------DD--------------EGQGVLHLAASLGYDWAIKPTVT  716 (1078)
Q Consensus       660 ~~~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~---------d~--------------~G~TpLH~Aa~~G~~~iv~~LL~  716 (1078)
                      .+.++||.|+..... .+|++|++.||||+++         |.              .|..||-+||-.+..+++++|++
T Consensus       183 ~GqSaLHiAIv~~~~-~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~  261 (782)
T KOG3676|consen  183 YGQSALHIAIVNRDA-ELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA  261 (782)
T ss_pred             cCcchHHHHHHhccH-HHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence            345788888877655 5688999999998864         11              37889999999999999999999


Q ss_pred             CCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHc
Q 001436          717 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAES  789 (1078)
Q Consensus       717 ~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~  789 (1078)
                      +|||+|++|.+|+|.||..+..-..++-.++|++|++ ..   ...+|..|.|||-+|++.|..++.+.+++.
T Consensus       262 ~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~-~l---~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  262 HGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN-AL---EHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             cCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC-cc---ccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            9999999999999999999999999999999999999 11   233678999999999999999999999998

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.27  E-value=9.8e-12  Score=113.39  Aligned_cols=99  Identities=22%  Similarity=0.236  Sum_probs=83.5

Q ss_pred             HHHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHH
Q 001436          668 IMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVL  747 (1078)
Q Consensus       668 aa~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~L  747 (1078)
                      .++++.... |+.....|.++|.. ..|+||||+||..|..+++++|+..||+++.+|+.|.|||.-|+..||.+||++|
T Consensus         9 ~vkNG~~De-Vk~~v~~g~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklL   86 (117)
T KOG4214|consen    9 NVKNGEIDE-VKQSVNEGLNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLL   86 (117)
T ss_pred             hhccCcHHH-HHHHHHccccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHH
Confidence            344443434 56666677888855 4899999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 001436          748 LSLGAAPGLLTDPSPEFPLSRTPSDLA  774 (1078)
Q Consensus       748 L~~GAdvn~~~d~~~~D~~G~TPLhlA  774 (1078)
                      |+.||+-..      +-++|.+.+..+
T Consensus        87 L~~GAdrt~------~~PdG~~~~eat  107 (117)
T KOG4214|consen   87 LQNGADRTI------HAPDGTALIEAT  107 (117)
T ss_pred             HHcCcccce------eCCCchhHHhhc
Confidence            999999866      347888776654

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.26  E-value=1.9e-11  Score=151.92  Aligned_cols=102  Identities=22%  Similarity=0.174  Sum_probs=61.2

Q ss_pred             CHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHc-C
Q 001436          673 LYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL-G  751 (1078)
Q Consensus       673 ~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~-G  751 (1078)
                      +...+++.|++.|+++|.+|..|.||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+.+ +
T Consensus        93 G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~  172 (664)
T PTZ00322         93 GDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQ  172 (664)
T ss_pred             CCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCC
Confidence            344556666666666666666666666666666666666666666666666666666666666666666666666665 1


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHH
Q 001436          752 AAPGLLTDPSPEFPLSRTPSDLA  774 (1078)
Q Consensus       752 Advn~~~d~~~~D~~G~TPLhlA  774 (1078)
                      ++.+.-.++++.+..|.+|+..+
T Consensus       173 ~~~~~ga~~~~~~~~g~~~~~~~  195 (664)
T PTZ00322        173 CHFELGANAKPDSFTGKPPSLED  195 (664)
T ss_pred             cccccCCCCCccccCCCCccchh
Confidence            11111112233555666665443

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.25  E-value=3.1e-11  Score=145.19  Aligned_cols=153  Identities=19%  Similarity=0.104  Sum_probs=122.2

Q ss_pred             chHHHHHHH--HcCHHHHHHHHHhCCC-CCCc----cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcccc---------C
Q 001436          662 YQILQKIMK--EKLYSWLLRKVCEDGK-GPCI----LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFR---------D  725 (1078)
Q Consensus       662 ~t~L~~aa~--~~~~~~lvk~Lle~Ga-d~n~----~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~---------D  725 (1078)
                      .+++|.++-  ..++..+++.|++.-. -+|.    -...|+||||+|+.+.+.++|++||+.||||+++         |
T Consensus       144 ET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~d  223 (782)
T KOG3676|consen  144 ETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDD  223 (782)
T ss_pred             hhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCccc
Confidence            455555544  3445556666665321 1221    1256999999999999999999999999999876         2


Q ss_pred             C--------------CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCC
Q 001436          726 L--------------SGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSL  791 (1078)
Q Consensus       726 ~--------------~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga  791 (1078)
                      .              .|..||-+||..++.+|+++|+++|||+++      +|..|+|.||..+..-..++..+++++|+
T Consensus       224 qk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~a------qDS~GNTVLH~lVi~~~~~My~~~L~~ga  297 (782)
T KOG3676|consen  224 QKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNA------QDSNGNTVLHMLVIHFVTEMYDLALELGA  297 (782)
T ss_pred             ccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCc------cccCCChHHHHHHHHHHHHHHHHHHhcCC
Confidence            1              477899999999999999999999999988      77899999999999988999999999997


Q ss_pred             CcccccCccCCCCCCChhHHhHH----HHHHHHHHc
Q 001436          792 TSLLLSLKMNDSADDGALEDSIA----KAVQTVSEK  823 (1078)
Q Consensus       792 ~~~~adln~kd~~g~tal~~a~~----~~v~~Lle~  823 (1078)
                      +   +...++|+.|-||+.+|+.    ++.+.++++
T Consensus       298 ~---~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  298 N---ALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             C---ccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            7   4477799999999998874    455666766

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.24  E-value=5.9e-12  Score=106.73  Aligned_cols=50  Identities=30%  Similarity=0.361  Sum_probs=18.6

Q ss_pred             CCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHH
Q 001436          686 KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWA  735 (1078)
Q Consensus       686 ad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~A  735 (1078)
                      +++|.+|..|.||||+||..|+.+++++||..|++++.+|..|+||||+|
T Consensus         7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             --TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            45555555555555555555555555555555555555555555555554

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.23  E-value=3.4e-11  Score=129.26  Aligned_cols=120  Identities=21%  Similarity=0.206  Sum_probs=102.3

Q ss_pred             hHHHHHHHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccc-cCCCCchHHHHHHHcCCH
Q 001436          663 QILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINF-RDLSGWTALHWAAYCGRE  741 (1078)
Q Consensus       663 t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~-~D~~G~TpLH~Aa~~G~~  741 (1078)
                      .+|+.++..+..+. ...|+..--++|.+|..|+|+|..|+..|+.++|++||+.|+|||. ++..++||||+||..|+.
T Consensus        14 ~~Lle~i~Kndt~~-a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~   92 (396)
T KOG1710|consen   14 SPLLEAIDKNDTEA-ALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQ   92 (396)
T ss_pred             hHHHHHHccCcHHH-HHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCc
Confidence            45555554444333 4456665556999999999999999999999999999999999998 567899999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHc
Q 001436          742 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAES  789 (1078)
Q Consensus       742 eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~  789 (1078)
                      ++..+|++.|+....++      .-|+|+..+|+.-||.+||.++-.+
T Consensus        93 dvcrllldaGa~~~~vN------svgrTAaqmAAFVG~H~CV~iINN~  134 (396)
T KOG1710|consen   93 DVCRLLLDAGARMYLVN------SVGRTAAQMAAFVGHHECVAIINNH  134 (396)
T ss_pred             hHHHHHHhccCcccccc------chhhhHHHHHHHhcchHHHHHHhcc
Confidence            99999999999998865      6899999999999999999887543

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.23  E-value=7.6e-12  Score=106.05  Aligned_cols=55  Identities=36%  Similarity=0.515  Sum_probs=33.3

Q ss_pred             HHhCC-CCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 001436          714 TVTAG-VSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLA  774 (1078)
Q Consensus       714 LL~~G-adin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlA  774 (1078)
                      ||++| +++|.+|..|.||||+||..|+.++|++||..|+++++      +|..|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~------~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNA------KDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---------TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCC------CcCCCCCHHHhC
Confidence            67888 99999999999999999999999999999999999998      567999999997

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.22  E-value=2e-11  Score=102.36  Aligned_cols=54  Identities=39%  Similarity=0.441  Sum_probs=35.9

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHH
Q 001436          695 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLL  748 (1078)
Q Consensus       695 G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL  748 (1078)
                      |+||||+||..|+.+++++|+++|+++|.+|.+|+||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            567777777777777777777777777777777777777777777777777765

...

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.18  E-value=8.1e-11  Score=146.36  Aligned_cols=96  Identities=31%  Similarity=0.352  Sum_probs=89.1

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHh
Q 001436          697 GVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS  776 (1078)
Q Consensus       697 TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~  776 (1078)
                      +.||.||..|+.+++++|++.|+++|.+|..|+||||+||..|+.++|++|+++|++++.      +|..|.||||+|+.
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~------~d~~G~TpLh~A~~  157 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL------LDKDGKTPLELAEE  157 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHH
Confidence            458999999999999999999999999999999999999999999999999999999988      55799999999999


Q ss_pred             cCcHHHHHHHHHc-------CCCcccccC
Q 001436          777 NGHKGISGFLAES-------SLTSLLLSL  798 (1078)
Q Consensus       777 ~G~~~iv~~LLe~-------ga~~~~adl  798 (1078)
                      .|+.+++++|+++       |++....+.
T Consensus       158 ~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~  186 (664)
T PTZ00322        158 NGFREVVQLLSRHSQCHFELGANAKPDSF  186 (664)
T ss_pred             CCcHHHHHHHHhCCCcccccCCCCCcccc
Confidence            9999999999998       777776443

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=99.13  E-value=2.7e-11  Score=148.98  Aligned_cols=254  Identities=17%  Similarity=0.135  Sum_probs=149.9

Q ss_pred             CCCccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCccccCCCCchHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCC
Q 001436          687 GPCILDDEGQGVLHLAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCGREKTVAVLLS-LGAAPGLLTDPSPEF  764 (1078)
Q Consensus       687 d~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~-Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~-~GAdvn~~~d~~~~D  764 (1078)
                      .+......|+|.||+++..++.|+++.+++- |-..+..|.+|.-.+|+ |..++.+++-+|+. .|..++.      +|
T Consensus       566 ~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i------~D  638 (975)
T KOG0520|consen  566 LSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDI------RD  638 (975)
T ss_pred             ccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeeccccccc------cc
Confidence            3445667899999999999999999999986 77777788888888998 55566666655553 5666666      66


Q ss_pred             CCCCCHHHHHHhcCcHHHHHHHHHcCCCccc-ccCccCCCCCCChhHHhHHHHHHHHHHccCC------------C--CC
Q 001436          765 PLSRTPSDLASSNGHKGISGFLAESSLTSLL-LSLKMNDSADDGALEDSIAKAVQTVSEKTAT------------P--AN  829 (1078)
Q Consensus       765 ~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~-adln~kd~~g~tal~~a~~~~v~~Lle~ga~------------~--~~  829 (1078)
                      ..|+||||+|+..|+..++..|++.|+.+.+ .+.+-....|.|+..++...+.+-+....+.            .  +.
T Consensus       639 ~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L~~~~~~~~~~~~~~  718 (975)
T KOG0520|consen  639 RNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKALSAHLSNLELADPNL  718 (975)
T ss_pred             CCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHHHHHHhhcccccccc
Confidence            8999999999999999999999999887663 3344444557888877654332222211110            0  00


Q ss_pred             -CCCC---------cch-hcccc--hHHHHHHHHHHhHHHHHHHhhhhHHHHHHHHhhhhhcCchHHHhHHHHhhccCcc
Q 001436          830 -DNDE---------SDV-LSLKD--SLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPV  896 (1078)
Q Consensus       830 -~~~~---------e~~-lslkd--sltAl~~AaqaAarIq~afR~~s~~rKq~~e~~de~g~~~e~alsllA~K~~k~~  896 (1078)
                       .+..         +.. ..+++  ++..--.|..  +--+.|-|.|..-+-+.....        ++..+....    .
T Consensus       719 s~~~~~~~~~~t~~e~s~~~~~~~~sl~Dtl~avr--dAa~aa~r~q~vfr~~~~~~~--------~a~~i~~~~----~  784 (975)
T KOG0520|consen  719 SADSEEDKAEKTSSEGSPNPDEDSDSLKDTLAAVR--DAAQAAARIQAVFRAQSFQKK--------QAREIMDAT----K  784 (975)
T ss_pred             CCCchhhhhhhccCCCCCCCCcccccccccccccc--chHHHHHhhhhhhhhhhhhhh--------hHHHHHhhc----c
Confidence             0000         000 00000  0000000000  011222222111110000000        011111000    0


Q ss_pred             cchhhhhhhHHHhhhhhhhHHHHHHhhccccchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001436          897 QGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRK  965 (1078)
Q Consensus       897 ~R~~~l~~AAv~IQk~~Rg~~~Rk~fl~~R~aai~IQa~~RG~~aRk~y~~~r~aa~~IQk~iR~~~~R  965 (1078)
                      .+..........+++.++++..|.    .-.++..||..+|||+.|+.|..+++-+++||+.+|++..|
T Consensus       785 ~~i~~~~~~~m~~~~a~~~~~~r~----~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r  849 (975)
T KOG0520|consen  785 EQISEELAVSMKASSAFSMCDDRS----DPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVR  849 (975)
T ss_pred             hhhhhhhhhhhhcccchhcCcccc----chhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHh
Confidence            111123344555666655333322    23578899999999999999999999999999999999876

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.11  E-value=1.2e-10  Score=97.66  Aligned_cols=54  Identities=41%  Similarity=0.519  Sum_probs=45.8

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHH
Q 001436          728 GWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLA  787 (1078)
Q Consensus       728 G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LL  787 (1078)
                      |+||||+||..|+.+++++|++.|+++|..      |..|.||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~------d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQ------DEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-------TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCC------CCCCCCHHHHHHHccCHHHHHHHC
Confidence            789999999999999999999999999884      579999999999999999999996

...

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.05  E-value=3.9e-10  Score=128.87  Aligned_cols=105  Identities=24%  Similarity=0.127  Sum_probs=90.5

Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcC
Q 001436          699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNG  778 (1078)
Q Consensus       699 LH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G  778 (1078)
                      |.-|+..|-.++|+-.+..--|+...+..|.||||-|+..||.+||++||..|+++|+      .|.+||||||+|+..+
T Consensus       554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa------~DSdGWTPLHCAASCN  627 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNA------ADSDGWTPLHCAASCN  627 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccC------ccCCCCchhhhhhhcC
Confidence            3447888999999999988889999999999999999999999999999999999998      6689999999999999


Q ss_pred             cHHHHHHHHHcCCCcccccCccCCCCCCChhHHhH
Q 001436          779 HKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI  813 (1078)
Q Consensus       779 ~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~  813 (1078)
                      +..+++.|++.|+....  ..+  ..+.||++.|.
T Consensus       628 nv~~ckqLVe~GaavfA--sTl--SDmeTa~eKCe  658 (752)
T KOG0515|consen  628 NVPMCKQLVESGAAVFA--STL--SDMETAAEKCE  658 (752)
T ss_pred             chHHHHHHHhccceEEe--eec--ccccchhhhcc
Confidence            99999999999975222  222  33578877654

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.04  E-value=7e-10  Score=119.30  Aligned_cols=110  Identities=24%  Similarity=0.205  Sum_probs=99.2

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 001436          695 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLA  774 (1078)
Q Consensus       695 G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlA  774 (1078)
                      -..||.-+...|..+....||+.--++|.+|..|.|||..|++.|+.++|++||+.|||+|...     +..+.||||.|
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~q-----hg~~YTpLmFA   86 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQ-----HGTLYTPLMFA   86 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCccc-----ccccccHHHHH
Confidence            4578999999999999999988766799999999999999999999999999999999999854     47899999999


Q ss_pred             HhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHH
Q 001436          775 SSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA  814 (1078)
Q Consensus       775 a~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~  814 (1078)
                      +..|+.++..+|++.|+.     ..+.|..|+||+..|+-
T Consensus        87 ALSGn~dvcrllldaGa~-----~~~vNsvgrTAaqmAAF  121 (396)
T KOG1710|consen   87 ALSGNQDVCRLLLDAGAR-----MYLVNSVGRTAAQMAAF  121 (396)
T ss_pred             HHcCCchHHHHHHhccCc-----cccccchhhhHHHHHHH
Confidence            999999999999999976     66678889999988773

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.68  E-value=5.7e-08  Score=110.88  Aligned_cols=95  Identities=29%  Similarity=0.320  Sum_probs=85.8

Q ss_pred             CccCCCCCcH------HHHHHHcCCHHHHHHHHhCCCCccccC-CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 001436          689 CILDDEGQGV------LHLAASLGYDWAIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPS  761 (1078)
Q Consensus       689 n~~d~~G~Tp------LH~Aa~~G~~~iv~~LL~~Gadin~~D-~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~  761 (1078)
                      -.+|.+|.|.      ||..+..|+.+..--||..||++|+.+ ..|.||||.||..|+..-+++|+-+|||+++     
T Consensus       121 ~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a-----  195 (669)
T KOG0818|consen  121 PCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGA-----  195 (669)
T ss_pred             CCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCC-----
Confidence            3466677665      899999999999988999999999987 6799999999999999999999999999998     


Q ss_pred             CCCCCCCCHHHHHHhcCcHHHHHHHHHc
Q 001436          762 PEFPLSRTPSDLASSNGHKGISGFLAES  789 (1078)
Q Consensus       762 ~~D~~G~TPLhlAa~~G~~~iv~~LLe~  789 (1078)
                       .|..|+||+.+|-..||.++++-|++.
T Consensus       196 -~d~~GmtP~~~AR~~gH~~laeRl~e~  222 (669)
T KOG0818|consen  196 -QDSSGMTPVDYARQGGHHELAERLVEI  222 (669)
T ss_pred             -CCCCCCcHHHHHHhcCchHHHHHHHHH
Confidence             568999999999999999999988873

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.53  E-value=4e-08  Score=117.43  Aligned_cols=83  Identities=29%  Similarity=0.370  Sum_probs=78.0

Q ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccC-CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 001436          688 PCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPL  766 (1078)
Q Consensus       688 ~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D-~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~  766 (1078)
                      .|.+|..|+|+||+|+..|...+++.||.+|++++.+| ..||||||-|.++|+.+|+-+||.+|+...+      +|.+
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i------~Dke  118 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRI------KDKE  118 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEE------eccc
Confidence            67899999999999999999999999999999999999 5799999999999999999999999998877      6789


Q ss_pred             CCCHHHHHHh
Q 001436          767 SRTPSDLASS  776 (1078)
Q Consensus       767 G~TPLhlAa~  776 (1078)
                      |..||..-++
T Consensus       119 glsplq~~~r  128 (1267)
T KOG0783|consen  119 GLSPLQFLSR  128 (1267)
T ss_pred             CCCHHHHHhh
Confidence            9999998776

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.46  E-value=1.5e-07  Score=107.21  Aligned_cols=94  Identities=29%  Similarity=0.305  Sum_probs=84.6

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCC
Q 001436          691 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL-GAAPGLLTDPSPEFPLSRT  769 (1078)
Q Consensus       691 ~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~-GAdvn~~~d~~~~D~~G~T  769 (1078)
                      ++.++.-++++||..|.+..++-+.-.|.|++.+|.+.+|+||.||..|+++++++||.. +.+++      ++|..|+|
T Consensus       502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~------~kDRw~rt  575 (622)
T KOG0506|consen  502 RENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPD------PKDRWGRT  575 (622)
T ss_pred             ccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCC------hhhccCCC
Confidence            345677889999999999999999999999999999999999999999999999999985 45544      47899999


Q ss_pred             HHHHHHhcCcHHHHHHHHHcC
Q 001436          770 PSDLASSNGHKGISGFLAESS  790 (1078)
Q Consensus       770 PLhlAa~~G~~~iv~~LLe~g  790 (1078)
                      ||+-|...+|.+++++|-+.-
T Consensus       576 PlDdA~~F~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  576 PLDDAKHFKHKEVVKLLEEAQ  596 (622)
T ss_pred             cchHhHhcCcHHHHHHHHHHh
Confidence            999999999999999998865

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=98.40  E-value=6.1e-07  Score=111.35  Aligned_cols=69  Identities=26%  Similarity=0.356  Sum_probs=61.1

Q ss_pred             cchhhhhhhHHHhhhhhhhHHHHHHhhccccchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001436          897 QGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKG  966 (1078)
Q Consensus       897 ~R~~~l~~AAv~IQk~~Rg~~~Rk~fl~~R~aai~IQa~~RG~~aRk~y~~~r~aa~~IQk~iR~~~~Rr  966 (1078)
                      +|...+..+++.||+.+|+|+.|+.|+.+|++++.||+.+||+.+|+... ...|++.||+.+|+|..|+
T Consensus       667 ~R~~vl~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~~~-~~~aai~~q~~~r~~~~r~  735 (862)
T KOG0160|consen  667 RRSDVLSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRETE-REAAAIGIQKECRSYLNRR  735 (862)
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhH-HHHHHHHhHHHHHHHHHHH
Confidence            45667889999999999999999999999999999999999999998444 4459999999999997754

>PF13606 Ank_3: Ankyrin repeat

Probab=98.37  E-value=3.8e-07  Score=67.52  Aligned_cols=30  Identities=40%  Similarity=0.403  Sum_probs=22.6

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 001436          727 SGWTALHWAAYCGREKTVAVLLSLGAAPGL  756 (1078)
Q Consensus       727 ~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~  756 (1078)
                      +|+||||+||..|+.++|++||++|+++|+
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            477777777777777777777777777763

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.30  E-value=1.7e-06  Score=100.70  Aligned_cols=85  Identities=21%  Similarity=0.109  Sum_probs=46.1

Q ss_pred             HHHcCCHHHHHHHHhCCCC--cc--ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhc
Q 001436          702 AASLGYDWAIKPTVTAGVS--IN--FRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSN  777 (1078)
Q Consensus       702 Aa~~G~~~iv~~LL~~Gad--in--~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~  777 (1078)
                      |+.......+-+||.+|..  +|  .-+.+|+||||+||..|++.+.++|+=+|+|+-+      +|..|+|||.||-..
T Consensus       631 A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~------rda~g~t~l~yar~a  704 (749)
T KOG0705|consen  631 AVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMA------RDAHGRTALFYARQA  704 (749)
T ss_pred             HHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcccee------cccCCchhhhhHhhc
Confidence            3333444445555555532  22  2334555666666666666666666666665544      345566666666666


Q ss_pred             CcHHHHHHHHHcCCC
Q 001436          778 GHKGISGFLAESSLT  792 (1078)
Q Consensus       778 G~~~iv~~LLe~ga~  792 (1078)
                      |..+|+.+|+.+|+.
T Consensus       705 ~sqec~d~llq~gcp  719 (749)
T KOG0705|consen  705 GSQECIDVLLQYGCP  719 (749)
T ss_pred             ccHHHHHHHHHcCCC
Confidence            666666666666555

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.28  E-value=1e-06  Score=66.43  Aligned_cols=32  Identities=38%  Similarity=0.439  Sum_probs=23.0

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 001436          727 SGWTALHWAAYCGREKTVAVLLSLGAAPGLLT  758 (1078)
Q Consensus       727 ~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~  758 (1078)
                      +|+||||+||..|+.+++++||++|+++++.+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            46777777777777777777777777776643

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.25  E-value=5e-07  Score=108.31  Aligned_cols=82  Identities=23%  Similarity=0.188  Sum_probs=75.7

Q ss_pred             ccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCcc
Q 001436          721 INFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKM  800 (1078)
Q Consensus       721 in~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~  800 (1078)
                      +|.+|..|+|+||+|+..|...+++.||.+|++++..+.     ..|+||||-|...|+.+|+-+||.+|.     ++.+
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~-----ESG~taLHRaiyyG~idca~lLL~~g~-----SL~i  114 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDE-----ESGYTALHRAIYYGNIDCASLLLSKGR-----SLRI  114 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccc-----cccchHhhHhhhhchHHHHHHHHhcCC-----ceEE
Confidence            688999999999999999999999999999999998654     579999999999999999999999994     5889


Q ss_pred             CCCCCCChhHHh
Q 001436          801 NDSADDGALEDS  812 (1078)
Q Consensus       801 kd~~g~tal~~a  812 (1078)
                      +|++|..|+..-
T Consensus       115 ~Dkeglsplq~~  126 (1267)
T KOG0783|consen  115 KDKEGLSPLQFL  126 (1267)
T ss_pred             ecccCCCHHHHH
Confidence            999999998763

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.24  E-value=2.9e-06  Score=97.38  Aligned_cols=86  Identities=19%  Similarity=0.219  Sum_probs=73.8

Q ss_pred             HHHHHHHHcCHHHHHHHHHhCCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHH
Q 001436          664 ILQKIMKEKLYSWLLRKVCEDGKGPCILD-DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK  742 (1078)
Q Consensus       664 ~L~~aa~~~~~~~lvk~Lle~Gad~n~~d-~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~e  742 (1078)
                      -||..+.....+. .-.|+..|+++|..+ ..|.||||.||..|...-+++|+-+|||++..|.+|.||+.+|-..||-+
T Consensus       136 QLhasvRt~nlet-~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~  214 (669)
T KOG0818|consen  136 QLHSSVRTGNLET-CLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHE  214 (669)
T ss_pred             HHHHHhhcccHHH-HHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchH
Confidence            3555555555444 445888999999987 56999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHc
Q 001436          743 TVAVLLSL  750 (1078)
Q Consensus       743 iV~~LL~~  750 (1078)
                      +.+-|++.
T Consensus       215 laeRl~e~  222 (669)
T KOG0818|consen  215 LAERLVEI  222 (669)
T ss_pred             HHHHHHHH
Confidence            98888764

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.21  E-value=4e-06  Score=97.00  Aligned_cols=104  Identities=25%  Similarity=0.301  Sum_probs=93.1

Q ss_pred             HHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--ccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 001436          681 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVS--INFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT  758 (1078)
Q Consensus       681 Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gad--in~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~  758 (1078)
                      +...|-++-.++.+..|.||+|+..|+-++|++||.+|-.  ++..|..|.|+||-||..++..+..+|+..||....  
T Consensus       885 ~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~k--  962 (1004)
T KOG0782|consen  885 THLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRK--  962 (1004)
T ss_pred             HHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhhee--
Confidence            4456777888899999999999999999999999999864  577889999999999999999999999999998866  


Q ss_pred             CCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcC
Q 001436          759 DPSPEFPLSRTPSDLASSNGHKGISGFLAESS  790 (1078)
Q Consensus       759 d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~g  790 (1078)
                          .|..|.||-.-|-+.|..+++.||-.+.
T Consensus       963 ----td~kg~tp~eraqqa~d~dlaayle~rq  990 (1004)
T KOG0782|consen  963 ----TDSKGKTPQERAQQAGDPDLAAYLESRQ  990 (1004)
T ss_pred             ----cccCCCChHHHHHhcCCchHHHHHhhhh
Confidence                4589999999999999999999997643

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.18  E-value=3.3e-06  Score=98.41  Aligned_cols=93  Identities=26%  Similarity=0.270  Sum_probs=74.9

Q ss_pred             hHHHHHHHHcCHHHHHHHHHhCCCC--CCc--cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHc
Q 001436          663 QILQKIMKEKLYSWLLRKVCEDGKG--PCI--LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYC  738 (1078)
Q Consensus       663 t~L~~aa~~~~~~~lvk~Lle~Gad--~n~--~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~  738 (1078)
                      .-|..|...... ..+-+|+.+|..  +|.  -+.+|+|+||+||..|++.+.++||.+|+|+-.+|.+|+|||.||-..
T Consensus       626 qqLl~A~~~~Dl-~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a  704 (749)
T KOG0705|consen  626 QQLLRAVAAEDL-QTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQA  704 (749)
T ss_pred             HHHHHHHHHHHH-HHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhc
Confidence            344444444433 345567777753  333  356789999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHcCCCCCC
Q 001436          739 GREKTVAVLLSLGAAPGL  756 (1078)
Q Consensus       739 G~~eiV~~LL~~GAdvn~  756 (1078)
                      |.-+|+.+||.+|+....
T Consensus       705 ~sqec~d~llq~gcp~e~  722 (749)
T KOG0705|consen  705 GSQECIDVLLQYGCPDEC  722 (749)
T ss_pred             ccHHHHHHHHHcCCCccc
Confidence            999999999999986543

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.14  E-value=2.6e-06  Score=64.19  Aligned_cols=33  Identities=36%  Similarity=0.410  Sum_probs=31.3

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCccccCC
Q 001436          694 EGQGVLHLAASLGYDWAIKPTVTAGVSINFRDL  726 (1078)
Q Consensus       694 ~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~  726 (1078)
                      +|.||||+||..|+.+++++||.+|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            589999999999999999999999999999874

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.13  E-value=4.4e-06  Score=97.26  Aligned_cols=87  Identities=24%  Similarity=0.264  Sum_probs=69.3

Q ss_pred             HHHHHHHHcCHHHHHHHHH-hCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHH
Q 001436          664 ILQKIMKEKLYSWLLRKVC-EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK  742 (1078)
Q Consensus       664 ~L~~aa~~~~~~~lvk~Ll-e~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~e  742 (1078)
                      ++|.+.-......+.+.|. +.+..++.+|..|.||||+|+..|+..+++.|+.+||++..+|+.||+|||-|+..|+.+
T Consensus        23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q  102 (560)
T KOG0522|consen   23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ  102 (560)
T ss_pred             ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence            3555554444444444333 445678889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHc
Q 001436          743 TVAVLLSL  750 (1078)
Q Consensus       743 iV~~LL~~  750 (1078)
                      ++..+|.+
T Consensus       103 ~i~~vlr~  110 (560)
T KOG0522|consen  103 IITEVLRH  110 (560)
T ss_pred             HHHHHHHH
Confidence            88877765

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.13  E-value=4.7e-06  Score=97.08  Aligned_cols=87  Identities=25%  Similarity=0.257  Sum_probs=73.8

Q ss_pred             cHHHHHHHcCCHHHHHH-H-HhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 001436          697 GVLHLAASLGYDWAIKP-T-VTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLA  774 (1078)
Q Consensus       697 TpLH~Aa~~G~~~iv~~-L-L~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlA  774 (1078)
                      -|||+++.....+-+.. | .+.+..|+.+|..|.||||+|+..|+..+++.|+.+||++..      +|..|++|||-|
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~------kN~~gWs~L~EA   95 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSI------KNNEGWSPLHEA   95 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccc------cccccccHHHHH
Confidence            45999998876665544 3 334678899999999999999999999999999999999987      668999999999


Q ss_pred             HhcCcHHHHHHHHHc
Q 001436          775 SSNGHKGISGFLAES  789 (1078)
Q Consensus       775 a~~G~~~iv~~LLe~  789 (1078)
                      +..|+..++..++.+
T Consensus        96 v~~g~~q~i~~vlr~  110 (560)
T KOG0522|consen   96 VSTGNEQIITEVLRH  110 (560)
T ss_pred             HHcCCHHHHHHHHHH
Confidence            999999887776654

>PF13606 Ank_3: Ankyrin repeat

Probab=98.12  E-value=2.8e-06  Score=62.92  Aligned_cols=30  Identities=37%  Similarity=0.381  Sum_probs=28.4

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCccc
Q 001436          694 EGQGVLHLAASLGYDWAIKPTVTAGVSINF  723 (1078)
Q Consensus       694 ~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~  723 (1078)
                      +|+||||+||..|+.++|++||++|+|||.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            589999999999999999999999999984

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=98.12  E-value=2.2e-05  Score=93.52  Aligned_cols=68  Identities=18%  Similarity=0.197  Sum_probs=55.7

Q ss_pred             chhhhhhhHHHhhhhhhhHHHHHHhhccccchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchh
Q 001436          898 GDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFR  973 (1078)
Q Consensus       898 R~~~l~~AAv~IQk~~Rg~~~Rk~fl~~R~aai~IQa~~RG~~aRk~y~~~r~aa~~IQk~iR~~~~Rr~~lRg~r  973 (1078)
                      |...+..-++.||+.||||++|.+|+++|.+++.|+ |||.       -++++.+..||+.+|+|++++-+-+.++
T Consensus       691 r~~~l~~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~-------~K~ks~v~el~~~~rg~k~~r~ygk~~~  758 (1001)
T KOG0164|consen  691 RAERLPSLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRR-------YKLKSYVQELQRRFRGAKQMRDYGKSIR  758 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-------HHHHHHHHHHHHHHHhhhhccccCCCCC
Confidence            445577889999999999999999999999999999 8883       3456788899999999988765444443

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.01  E-value=5.1e-06  Score=95.07  Aligned_cols=87  Identities=23%  Similarity=0.111  Sum_probs=76.0

Q ss_pred             HHHHHHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCccccCCCCchHHHHHHHcCCHHH
Q 001436          665 LQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCGREKT  743 (1078)
Q Consensus       665 L~~aa~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~-Gadin~~D~~G~TpLH~Aa~~G~~ei  743 (1078)
                      +..++.. |....++.+.-.|.|++.+|.+.+|+||.||..|+.+++++||+. +++++.+|.+|+|||.-|..++|.++
T Consensus       510 ~~~aa~~-GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v  588 (622)
T KOG0506|consen  510 VMYAAKN-GDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEV  588 (622)
T ss_pred             hhhhhhc-CCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHH
Confidence            4445554 455556777778999999999999999999999999999999985 99999999999999999999999999


Q ss_pred             HHHHHHcCC
Q 001436          744 VAVLLSLGA  752 (1078)
Q Consensus       744 V~~LL~~GA  752 (1078)
                      +++|-+.-.
T Consensus       589 ~k~L~~~~~  597 (622)
T KOG0506|consen  589 VKLLEEAQY  597 (622)
T ss_pred             HHHHHHHhc
Confidence            999988643

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=97.93  E-value=0.00071  Score=83.39  Aligned_cols=123  Identities=20%  Similarity=-0.006  Sum_probs=94.4

Q ss_pred             HHHHHHHHcCHHHHHHHHHh-CC---CCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcC
Q 001436          664 ILQKIMKEKLYSWLLRKVCE-DG---KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCG  739 (1078)
Q Consensus       664 ~L~~aa~~~~~~~lvk~Lle-~G---ad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G  739 (1078)
                      .++.++. +|....|+..++ ..   .++|..|.-|+++||+|..+-+.+++++|+.++..+       ..+|-+|...|
T Consensus        28 ~fL~a~E-~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~   99 (822)
T KOG3609|consen   28 GFLLAHE-NGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVG   99 (822)
T ss_pred             HHHHHHH-cCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHH
Confidence            3444444 444445555554 33   468899999999999999999999999999987766       34899999999


Q ss_pred             CHHHHHHHHHcCCCCC----CCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcc
Q 001436          740 REKTVAVLLSLGAAPG----LLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSL  794 (1078)
Q Consensus       740 ~~eiV~~LL~~GAdvn----~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~  794 (1078)
                      ..++|++|+.+-....    ..++..+...-+.|||.+||..++.+|+++||.+|+..+
T Consensus       100 ~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~  158 (822)
T KOG3609|consen  100 SVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP  158 (822)
T ss_pred             HHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence            9999999998733221    122233455678999999999999999999999997633

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=97.89  E-value=1.2e-05  Score=100.71  Aligned_cols=97  Identities=28%  Similarity=0.351  Sum_probs=84.9

Q ss_pred             CCCCCc--cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 001436          685 GKGPCI--LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSP  762 (1078)
Q Consensus       685 Gad~n~--~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~  762 (1078)
                      |+.+|.  .-..|.|+||.|+..|..-++++|+..|+++|.+|..|.||||.+...|+...+..|+++||+.++.+    
T Consensus       644 ~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~----  719 (785)
T KOG0521|consen  644 GCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFD----  719 (785)
T ss_pred             hhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccC----
Confidence            444443  23568999999999999999999999999999999999999999999999999999999999999854    


Q ss_pred             CCCCCCCHHHHHHhcCcHHHHHHHH
Q 001436          763 EFPLSRTPSDLASSNGHKGISGFLA  787 (1078)
Q Consensus       763 ~D~~G~TPLhlAa~~G~~~iv~~LL  787 (1078)
                        .+|.+||++|....+.+++-+|.
T Consensus       720 --~~~~~~l~~a~~~~~~d~~~l~~  742 (785)
T KOG0521|consen  720 --PDGKLPLDIAMEAANADIVLLLR  742 (785)
T ss_pred             --ccCcchhhHHhhhccccHHHHHh
Confidence              79999999998877777666554

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.86  E-value=4.1e-05  Score=79.16  Aligned_cols=65  Identities=37%  Similarity=0.419  Sum_probs=37.8

Q ss_pred             CCccccCCCCchHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHc
Q 001436          719 VSINFRDLSGWTALHWAAYCGREKTVAVLLSLG-AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAES  789 (1078)
Q Consensus       719 adin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~G-Advn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~  789 (1078)
                      .+||.+|..|||||+.||..|..+.|.+|+.+| +.+.+      .|..|.+++.+|-+.|+.+++..|.+.
T Consensus         3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv------~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGV------TDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccc------cccccchHHHHHHhcChHHHHHHHHHH
Confidence            455566666666666666666666666666666 44444      335566666666666666666655554

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.58  E-value=0.00021  Score=80.37  Aligned_cols=87  Identities=26%  Similarity=0.214  Sum_probs=68.5

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 001436          696 QGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLAS  775 (1078)
Q Consensus       696 ~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa  775 (1078)
                      ..-|..||..|..+.|+.|++.|++||.+|.....||.+|+..||+.+|++||++||-...-+      ..|.-. |+++
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdt------f~G~RC-~Yga  109 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDT------FDGDRC-HYGA  109 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccc------cCcchh-hhhh
Confidence            456899999999999999999999999999999999999999999999999999998665422      345443 5665


Q ss_pred             hcCcHHHHHHHHHcCC
Q 001436          776 SNGHKGISGFLAESSL  791 (1078)
Q Consensus       776 ~~G~~~iv~~LLe~ga  791 (1078)
                      .+.  .|=.+|+...+
T Consensus       110 Lnd--~IR~mllsydi  123 (516)
T KOG0511|consen  110 LND--RIRRMLLSYDI  123 (516)
T ss_pred             hhH--HHHHHHHHHHH
Confidence            543  34455555443

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=97.49  E-value=0.00014  Score=84.56  Aligned_cols=104  Identities=20%  Similarity=0.213  Sum_probs=82.4

Q ss_pred             HHHHcCCHHHHHHHHhCCCCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcH
Q 001436          701 LAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHK  780 (1078)
Q Consensus       701 ~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~  780 (1078)
                      -|+..+..--++-+-.+|.++-.++.+..|.||+|+..|+.++|++||.+|..- ++   +..|..|.|+||-|+..++.
T Consensus       872 ~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~e-ll---d~~de~get~lhkaa~~~~r  947 (1004)
T KOG0782|consen  872 RAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSE-LL---DMADETGETALHKAACQRNR  947 (1004)
T ss_pred             HHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHH-HH---HHHhhhhhHHHHHHHHhcch
Confidence            344444433333344568888899999999999999999999999999998642 21   22557899999999999999


Q ss_pred             HHHHHHHHcCCCcccccCccCCCCCCChhHHhH
Q 001436          781 GISGFLAESSLTSLLLSLKMNDSADDGALEDSI  813 (1078)
Q Consensus       781 ~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~  813 (1078)
                      .++.+|.+.|+.     +--.|..|.||-.-+.
T Consensus       948 ~vc~~lvdagas-----l~ktd~kg~tp~eraq  975 (1004)
T KOG0782|consen  948 AVCQLLVDAGAS-----LRKTDSKGKTPQERAQ  975 (1004)
T ss_pred             HHHHHHHhcchh-----heecccCCCChHHHHH
Confidence            999999999954     7778999999976554

>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors

Probab=97.45  E-value=2.9e-05  Score=69.90  Aligned_cols=66  Identities=21%  Similarity=0.310  Sum_probs=57.3

Q ss_pred             EEEeecCCCCCCCCCeeEEEeccccccccccccchhhhhcCCchHHHHHHHCCCCccCCCC-CCCCCchHHHHH
Q 001436          493 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPP-HAVGRVPFYITC  565 (1078)
Q Consensus       493 sI~dfsP~wa~~~ggtKVlI~G~f~~~~~~~~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~-~~~G~TPLhvA~  565 (1078)
                      .|+.++|.|+++.||++|.|+|..+.+.       +.|+||+..+-.+++...+++|.+|| +.+|-+...+.-
T Consensus         2 ~I~ai~P~eG~~tGGt~VtI~GenF~~g-------l~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~Vtl~~   68 (85)
T cd01175           2 CIKAISPSEGWTTGGATVIIIGDNFFDG-------LQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSY   68 (85)
T ss_pred             cccEecCCCCcccCCeEEEEECCCCCCC-------cEEEECCEeEEEEEeccceEEEecCCCCCCceEEEEEEE
Confidence            4899999999999999999999666553       77999999999999999999999999 999987765543

COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.41  E-value=0.00053  Score=85.95  Aligned_cols=87  Identities=20%  Similarity=0.152  Sum_probs=62.1

Q ss_pred             HHHHHhhccccchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhccCCCCCCCCCCCCcchHHHH
Q 001436          917 KKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFL  996 (1078)
Q Consensus       917 ~~Rk~fl~~R~aai~IQa~~RG~~aRk~y~~~r~aa~~IQk~iR~~~~Rr~~lRg~r~~~~~~~~~~~~~~~~e~e~~~l  996 (1078)
                      +..++-..+..+++.||..+|||..|++|..+|.+++.||+.+||+..|+..                            
T Consensus       664 le~~R~~vl~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~~----------------------------  715 (862)
T KOG0160|consen  664 LEARRSDVLSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRET----------------------------  715 (862)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhh----------------------------
Confidence            3333434566788899999999999999999999999999999999885411                            


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhhccc
Q 001436          997 KDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRET 1040 (1078)
Q Consensus       997 k~~r~q~e~r~~~A~~riQs~~r~~~aR~~y~r~l~~~~~~q~~ 1040 (1078)
                             +  ...|++.+|+.||+...|++|+.+..+.+.+|..
T Consensus       716 -------~--~~~aai~~q~~~r~~~~r~~y~~~~~~~~~~qs~  750 (862)
T KOG0160|consen  716 -------E--REAAAIGIQKECRSYLNRRRYRALIPASITIQSG  750 (862)
T ss_pred             -------H--HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   0  2355566666666666666666665555555543

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.41  E-value=0.0003  Score=73.00  Aligned_cols=71  Identities=21%  Similarity=0.102  Sum_probs=65.9

Q ss_pred             CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCC
Q 001436          685 GKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPG  755 (1078)
Q Consensus       685 Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~G-adin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn  755 (1078)
                      +.++|++|..|+|+|+.|+..|..+++.+|+.+| +.|...|..|.+++.+|-..|+.++|..|.+.-.+-.
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets   73 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETS   73 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCC
Confidence            4689999999999999999999999999999999 8999999999999999999999999999998744443

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.28  E-value=0.00078  Score=75.91  Aligned_cols=82  Identities=20%  Similarity=0.194  Sum_probs=64.8

Q ss_pred             chHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCCh
Q 001436          729 WTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGA  808 (1078)
Q Consensus       729 ~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~ta  808 (1078)
                      +--|..||+.|..+.|+.|++.|.++|.+      |.....||.+|+..||..+|++||++|+.      --+|...+.-
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~v------D~fD~spL~lAsLcGHe~vvklLLenGAi------C~rdtf~G~R  104 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNAV------DRFDSSPLYLASLCGHEDVVKLLLENGAI------CSRDTFDGDR  104 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcchh------hcccccHHHHHHHcCcHHHHHHHHHcCCc------ccccccCcch
Confidence            34589999999999999999999999985      47889999999999999999999999974      3344444455


Q ss_pred             hHHhHH--HHHHHHHH
Q 001436          809 LEDSIA--KAVQTVSE  822 (1078)
Q Consensus       809 l~~a~~--~~v~~Lle  822 (1078)
                      +|+++.  .+...|+.
T Consensus       105 C~YgaLnd~IR~mlls  120 (516)
T KOG0511|consen  105 CHYGALNDRIRRMLLS  120 (516)
T ss_pred             hhhhhhhHHHHHHHHH
Confidence            666663  34444443

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=97.18  E-value=0.00027  Score=48.00  Aligned_cols=20  Identities=40%  Similarity=0.585  Sum_probs=12.7

Q ss_pred             cchhhHHHHHhHHHHHHHHH
Q 001436          927 QRIVKIQAHVRGHQARKKYR  946 (1078)
Q Consensus       927 ~aai~IQa~~RG~~aRk~y~  946 (1078)
                      +++++||++|||+++|++|+
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcC
Confidence            45666666666666666653

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=97.01  E-value=0.0012  Score=85.45  Aligned_cols=67  Identities=24%  Similarity=0.232  Sum_probs=53.0

Q ss_pred             cchhhhhhhHHHhhhhhhhHHHHHHhhccccchhhHHHHHhHHHHHHHHHHHHH--HHHHHHHHHHHHH
Q 001436          897 QGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIW--SVGILEKVILRWR  963 (1078)
Q Consensus       897 ~R~~~l~~AAv~IQk~~Rg~~~Rk~fl~~R~aai~IQa~~RG~~aRk~y~~~r~--aa~~IQk~iR~~~  963 (1078)
                      +|...++..++.||+.|||++.||+|+...+.+..||...+|++.|+....-.|  +++.+|..++...
T Consensus       739 ~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  807 (1463)
T COG5022         739 MRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLG  807 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchHHHhHHHhhHHhHHHh
Confidence            456678999999999999999999999988888888888888887766654444  6677777776543

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=96.96  E-value=0.00062  Score=85.83  Aligned_cols=101  Identities=19%  Similarity=0.072  Sum_probs=80.9

Q ss_pred             cCCCCCcCcccccchHHHHHHHHcCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCC
Q 001436          649 ANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSG  728 (1078)
Q Consensus       649 ~ad~n~~s~~~~~~t~L~~aa~~~~~~~lvk~Lle~Gad~n~~d~~G~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~~G  728 (1078)
                      +..++.........+++|.++. .+...++++|++.|+++|.+|..|.||||.+...|+...+..|+.+|++.++.|..|
T Consensus       644 ~~~~n~~~~~~~~~s~lh~a~~-~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~  722 (785)
T KOG0521|consen  644 GCCENWPVVLCIGCSLLHVAVG-TGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDG  722 (785)
T ss_pred             hhhhccchhhhcccchhhhhhc-cchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccC
Confidence            3334433333344566666665 446667899999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHcCCHHHHHHHHHc
Q 001436          729 WTALHWAAYCGREKTVAVLLSL  750 (1078)
Q Consensus       729 ~TpLH~Aa~~G~~eiV~~LL~~  750 (1078)
                      .+||++|....+.+++-+|...
T Consensus       723 ~~~l~~a~~~~~~d~~~l~~l~  744 (785)
T KOG0521|consen  723 KLPLDIAMEAANADIVLLLRLA  744 (785)
T ss_pred             cchhhHHhhhccccHHHHHhhh
Confidence            9999999877777766555443

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=96.64  E-value=0.0017  Score=44.14  Aligned_cols=21  Identities=43%  Similarity=0.637  Sum_probs=19.0

Q ss_pred             hhhHHHhhhhhhhHHHHHHhh
Q 001436          903 HSAAIQIQKKFRGWKKRKEFL  923 (1078)
Q Consensus       903 ~~AAv~IQk~~Rg~~~Rk~fl  923 (1078)
                      +.||+.||+.||||++|++|+
T Consensus         1 ~~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    1 RKAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcC
Confidence            468999999999999999984

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=96.48  E-value=0.0045  Score=74.66  Aligned_cols=90  Identities=18%  Similarity=0.142  Sum_probs=63.2

Q ss_pred             ccccchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hccccchhhhccCCCCCCCCCCCCcchHHHHH
Q 001436          924 LIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRK------GSGLRGFRRDALGMNPNPQHMPLKEDDYDFLK  997 (1078)
Q Consensus       924 ~~R~aai~IQa~~RG~~aRk~y~~~r~aa~~IQk~iR~~~~R------r~~lRg~r~~~~~~~~~~~~~~~~e~e~~~lk  997 (1078)
                      ++..-++.||+.||||++|.+|++++.++++|+ ++|++..|      ++.+||++.++.-..+..=+..|         
T Consensus       694 ~l~~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~K~ks~v~el~~~~rg~k~~r~ygk~~~WP~pP---------  763 (1001)
T KOG0164|consen  694 RLPSLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRYKLKSYVQELQRRFRGAKQMRDYGKSIRWPAPP---------  763 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCc---------
Confidence            345678899999999999999999999998888 88888776      66778877665432211111122         


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 001436          998 DGRKQTEERLQKALGRVKSMVQYPEARAQYRRL 1030 (1078)
Q Consensus       998 ~~r~q~e~r~~~A~~riQs~~r~~~aR~~y~r~ 1030 (1078)
                             ..++++..+++.|+-.+.|++-.+++
T Consensus       764 -------~~Lr~~~~~L~~lf~rwra~~~~~~i  789 (1001)
T KOG0164|consen  764 -------LVLREFEELLRELFIRWRAWQILKSI  789 (1001)
T ss_pred             -------hHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence                   24557777888887777766554444

>PTZ00014 myosin-A; Provisional

Probab=96.30  E-value=0.0029  Score=80.55  Aligned_cols=39  Identities=15%  Similarity=0.084  Sum_probs=26.2

Q ss_pred             cchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001436          927 QRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRK  965 (1078)
Q Consensus       927 ~aai~IQa~~RG~~aRk~y~~~r~aa~~IQk~iR~~~~R  965 (1078)
                      ..++.||++||||++|++|++++.++++||+.+|+|..+
T Consensus       778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~  816 (821)
T PTZ00014        778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVI  816 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345666777777777777776666667777777776654

>smart00248 ANK ankyrin repeats

Probab=95.90  E-value=0.012  Score=40.23  Aligned_cols=27  Identities=44%  Similarity=0.495  Sum_probs=17.2

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHcCCCC
Q 001436          728 GWTALHWAAYCGREKTVAVLLSLGAAP  754 (1078)
Q Consensus       728 G~TpLH~Aa~~G~~eiV~~LL~~GAdv  754 (1078)
                      |.||||+|+..|+.++++.|+..|.++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            556666666666666666666666544

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=95.87  E-value=0.023  Score=70.62  Aligned_cols=122  Identities=19%  Similarity=0.074  Sum_probs=94.1

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhC--C--CCccccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCH
Q 001436          695 GQGVLHLAASLGYDWAIKPTVTA--G--VSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTP  770 (1078)
Q Consensus       695 G~TpLH~Aa~~G~~~iv~~LL~~--G--adin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TP  770 (1078)
                      +.--.-.||..|+.-.|+..++.  .  .++|++|.-|+++||+|..+.+.+++++|+.++..+             .-+
T Consensus        25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------------gdA   91 (822)
T KOG3609|consen   25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------------GDA   91 (822)
T ss_pred             hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------------chH
Confidence            33345689999999999887764  2  589999999999999999999999999999886544             348


Q ss_pred             HHHHHhcCcHHHHHHHHHcCCCcccccC-----ccCCCCCCChhHHhH----HHHHHHHHHccCCCCC
Q 001436          771 SDLASSNGHKGISGFLAESSLTSLLLSL-----KMNDSADDGALEDSI----AKAVQTVSEKTATPAN  829 (1078)
Q Consensus       771 LhlAa~~G~~~iv~~LLe~ga~~~~adl-----n~kd~~g~tal~~a~----~~~v~~Lle~ga~~~~  829 (1078)
                      |-+|+..|..++|++|+.+-...+....     ...-..+-||+-+|+    .++++.|+.+|+++.-
T Consensus        92 LL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~  159 (822)
T KOG3609|consen   92 LLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI  159 (822)
T ss_pred             HHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence            9999999999999999987544322111     112233567866655    6899999999987543

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=95.87  E-value=0.0054  Score=43.90  Aligned_cols=21  Identities=43%  Similarity=0.597  Sum_probs=15.8

Q ss_pred             ccchhhHHHHHhHHHHHHHHH
Q 001436          926 RQRIVKIQAHVRGHQARKKYR  946 (1078)
Q Consensus       926 R~aai~IQa~~RG~~aRk~y~  946 (1078)
                      ..++++||++|||+++|++|+
T Consensus         3 ~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        3 TRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHhhh
Confidence            457778888888888887773

Calmodulin-binding motif.

>PTZ00014 myosin-A; Provisional

Probab=95.65  E-value=0.015  Score=74.19  Aligned_cols=43  Identities=21%  Similarity=0.219  Sum_probs=39.7

Q ss_pred             hhhhHHHhhhhhhhHHHHHHhhccccchhhHHHHHhHHHHHHH
Q 001436          902 AHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKK  944 (1078)
Q Consensus       902 l~~AAv~IQk~~Rg~~~Rk~fl~~R~aai~IQa~~RG~~aRk~  944 (1078)
                      +...++.||++||||+.|++|++++.++++||++||+|++++.
T Consensus       776 ~~~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~  818 (821)
T PTZ00014        776 WEPLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAE  818 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3457899999999999999999999999999999999999865

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=95.59  E-value=0.018  Score=67.43  Aligned_cols=71  Identities=30%  Similarity=0.319  Sum_probs=55.5

Q ss_pred             HHHHHHHHhCCCCcccc------CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHH
Q 001436          708 DWAIKPTVTAGVSINFR------DLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKG  781 (1078)
Q Consensus       708 ~~iv~~LL~~Gadin~~------D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~  781 (1078)
                      ...|++|.+++++.|+.      +..--|+||+|+..|..+||.+||+.|+|+.+      +|..|.||..++.   +.+
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~------kd~~Grtpy~ls~---nkd  474 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPST------KDGAGRTPYSLSA---NKD  474 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchh------cccCCCCcccccc---cHH
Confidence            46778888888877653      44567999999999999999999999988866      6679999999887   445


Q ss_pred             HHHHHH
Q 001436          782 ISGFLA  787 (1078)
Q Consensus       782 iv~~LL  787 (1078)
                      |-..++
T Consensus       475 Vk~~F~  480 (591)
T KOG2505|consen  475 VKSIFI  480 (591)
T ss_pred             HHHHHH
Confidence            544444

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=95.36  E-value=0.31  Score=64.09  Aligned_cols=143  Identities=20%  Similarity=0.169  Sum_probs=79.7

Q ss_pred             HhHHHHHHHhhhhHHHHHHHHhhhhhcCchHHHhHHH--HhhccCcccchhhhhhhHHHhhhhhhhHHHHHHhhccccch
Q 001436          852 AADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLV--AAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRI  929 (1078)
Q Consensus       852 aAarIq~afR~~s~~rKq~~e~~de~g~~~e~alsll--A~K~~k~~~R~~~l~~AAv~IQk~~Rg~~~Rk~fl~~R~aa  929 (1078)
                      ++.+||+++|..-.||+-......      ..+...+  .++..+... ....-.+++.||..||....|++|...-.++
T Consensus       747 ~~~~iq~aiR~~~~rrr~~~~~k~------i~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~i  819 (1463)
T COG5022         747 IATRIQRAIRGRYLRRRYLQALKR------IKKIQVIQHGFRLRRLVD-YELKWRLFIKLQPLLSLLGSRKEYRSYLACI  819 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHhcccchhhhcc-cchHHHhHHHhhHHhHHHhhHHHHHHHHHHH
Confidence            889999999986666543211111      0001111  112221111 2234456777777777777777777766677


Q ss_pred             hhHH-HHHhHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhccccchhhhccCCCCCCCCCCCCcchHHHHHHHHHHHHHH
Q 001436          930 VKIQ-AHVRGHQARKKYRP--IIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEER 1006 (1078)
Q Consensus       930 i~IQ-a~~RG~~aRk~y~~--~r~aa~~IQk~iR~~~~Rr~~lRg~r~~~~~~~~~~~~~~~~e~e~~~lk~~r~q~e~r 1006 (1078)
                      +.+| ..+|....|..+..  ...+...+++++|....                                    +.+...
T Consensus       820 ~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~~~------------------------------------~kr~~~  863 (1463)
T COG5022         820 IKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKA------------------------------------KKRFSL  863 (1463)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhh------------------------------------hHHHHH
Confidence            7777 55666655554322  23366677776555433                                    112334


Q ss_pred             HHHHHHHHHHhhccHHHHHHHHHHHHHHHhh
Q 001436         1007 LQKALGRVKSMVQYPEARAQYRRLLTVVEGS 1037 (1078)
Q Consensus      1007 ~~~A~~riQs~~r~~~aR~~y~r~l~~~~~~ 1037 (1078)
                      +.+.++.+|+.+|...|++++..+...+..+
T Consensus       864 L~k~~i~~~~~~r~~~a~r~~~e~k~~~~~~  894 (1463)
T COG5022         864 LKKETIYLQSAQRVELAERQLQELKIDVKSI  894 (1463)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence            4456666777777777777777775544433

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=95.34  E-value=0.17  Score=59.57  Aligned_cols=75  Identities=16%  Similarity=0.145  Sum_probs=61.9

Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCcccccCccCCCCCCChhHHhHHHHHHHH
Q 001436          741 EKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTV  820 (1078)
Q Consensus       741 ~eiV~~LL~~GAdvn~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~ga~~~~adln~kd~~g~tal~~a~~~~v~~L  820 (1078)
                      ...+++|.+.+++.|..-.|...+..-.|+||+|+.+|...+|.+||+.|++     ..++|..|.||..+++..-|+..
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~D-----p~~kd~~Grtpy~ls~nkdVk~~  478 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCD-----PSTKDGAGRTPYSLSANKDVKSI  478 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCC-----chhcccCCCCcccccccHHHHHH
Confidence            5678899999998877544555666778999999999999999999999965     67799999999998876655544

>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold

Probab=95.23  E-value=0.00033  Score=63.39  Aligned_cols=71  Identities=18%  Similarity=0.257  Sum_probs=57.0

Q ss_pred             EEEeecCCCCCCCCCeeEEEeccccccccccccchhhhhcCCchHHHH-HHHCCCCccCCCCCCCCCchHHHHHhC
Q 001436          493 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAE-VLADGVLCCRIPPHAVGRVPFYITCSN  567 (1078)
Q Consensus       493 sI~dfsP~wa~~~ggtKVlI~G~f~~~~~~~~~~~~Ac~fG~veVv~~-LLq~Gv~rC~~p~~~~G~TPLhvA~~n  567 (1078)
                      .|+.++|.|++..||.+|.|.|.+|..    ....+.|.+|+..+... .+....+.|..|+...|..++.+...+
T Consensus         2 ~I~si~P~~~~~~gg~~ItI~G~~f~~----~~~~~~v~i~~~~~~~~~~~~~~~i~c~~p~~~~~~~~v~v~~~~   73 (85)
T PF01833_consen    2 VITSISPNSGSISGGTNITITGSNFGS----NSSNISVKIGGSQCTVITVVSSTQITCTSPALPSGNVNVSVTVNG   73 (85)
T ss_dssp             EEEEEESSEEETTCTSEEEEEEESSES----SSTTEEEEETTEEEEEEGEEETTEEEEE--SCSSEEEEEEEEETT
T ss_pred             EEEEEECCeEecCCCEEEEEEEEeecc----cCCceEEEECCEeeeEEEEECCcEEEEEECCCCCccEEEEEEECC
Confidence            689999999999999999999999822    12468999999987777 888899999999988777777665554

These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....

>smart00248 ANK ankyrin repeats

Probab=95.04  E-value=0.035  Score=37.85  Aligned_cols=29  Identities=38%  Similarity=0.461  Sum_probs=26.4

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCcc
Q 001436          694 EGQGVLHLAASLGYDWAIKPTVTAGVSIN  722 (1078)
Q Consensus       694 ~G~TpLH~Aa~~G~~~iv~~LL~~Gadin  722 (1078)
                      .|.||||+|+..|+.++++.|+..|.+++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            47899999999999999999999998765

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=94.90  E-value=0.022  Score=40.77  Aligned_cols=22  Identities=41%  Similarity=0.590  Sum_probs=19.8

Q ss_pred             hhhhHHHhhhhhhhHHHHHHhh
Q 001436          902 AHSAAIQIQKKFRGWKKRKEFL  923 (1078)
Q Consensus       902 l~~AAv~IQk~~Rg~~~Rk~fl  923 (1078)
                      +..+|+.||+.||||+.|++|+
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            4578999999999999999984

Calmodulin-binding motif.

>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT)

Probab=94.23  E-value=0.0062  Score=55.75  Aligned_cols=59  Identities=24%  Similarity=0.313  Sum_probs=47.9

Q ss_pred             EEEeecCCCCCCCCCeeEEEeccccccccccccchhhhhc-CCchHHHHHHHCCCCccCCCCCCC
Q 001436          493 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMF-AEVEVPAEVLADGVLCCRIPPHAV  556 (1078)
Q Consensus       493 sI~dfsP~wa~~~ggtKVlI~G~f~~~~~~~~~~~~Ac~f-G~veVv~~LLq~Gv~rC~~p~~~~  556 (1078)
                      .|+.++|.+++..||++|.|.|..+....     .+.|+| |...+....+....+.|..|+...
T Consensus         2 ~I~~i~P~~g~~~GGt~itI~G~~f~~~~-----~~~v~~~g~~~c~~~~~~~~~i~C~~p~~~~   61 (89)
T cd00102           2 VITSISPSSGPVSGGTEVTITGSNFGSGS-----NLRVTFGGGVPCSVLSVSSTAIVCTTPPYAN   61 (89)
T ss_pred             EEeEEECCcCCCCCCeEEEEEEECCCCCC-----cEEEEEeCCCeEEEEEecCCEEEEECCCCCC
Confidence            68999999999999999999999887642     468889 887666555577888899887544

IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.

>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR)

Probab=94.14  E-value=0.0067  Score=55.95  Aligned_cols=70  Identities=19%  Similarity=0.315  Sum_probs=53.2

Q ss_pred             EEEeecCCCCCCCCCeeEEEeccccccccccccchhhhhcCCchHHHHHHHCCCCccCCCCCC-CCCchHHHHHhC
Q 001436          493 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHA-VGRVPFYITCSN  567 (1078)
Q Consensus       493 sI~dfsP~wa~~~ggtKVlI~G~f~~~~~~~~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~-~G~TPLhvA~~n  567 (1078)
                      .|+.|+|..++..|||.|.|.|.++...     ....|++|..++...-.....+.|..|+.. .|..++.+...+
T Consensus         2 ~I~~i~P~~Gp~~GGT~vtI~G~~~~~~-----~~~~V~ig~~~C~~~~~~~~~i~C~tp~~~~~~~~~v~V~~d~   72 (85)
T cd01179           2 SITSLSPSYGPQSGGTRLTITGKHLNAG-----SSVRVTVGGQPCKILSVSSSQIVCLTPPSASPGEAPVKVLIDG   72 (85)
T ss_pred             eeeEEcCCCCCCCCCEEEEEEEECCCCC-----CeEEEEECCeEeeEEEecCCEEEEECCCCCCCceEEEEEEECC
Confidence            6899999999999999999999998764     226788999866654456677889988753 355556555443

Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=91.16  E-value=0.47  Score=62.17  Aligned_cols=96  Identities=24%  Similarity=0.241  Sum_probs=70.5

Q ss_pred             HhhhhhhhHHHHHHhhcc------c-cchhhHHHHHhHHHH---HHHH-HHHHHHHHHHHHHHHHHHHhhccccchhhhc
Q 001436          908 QIQKKFRGWKKRKEFLLI------R-QRIVKIQAHVRGHQA---RKKY-RPIIWSVGILEKVILRWRRKGSGLRGFRRDA  976 (1078)
Q Consensus       908 ~IQk~~Rg~~~Rk~fl~~------R-~aai~IQa~~RG~~a---Rk~y-~~~r~aa~~IQk~iR~~~~Rr~~lRg~r~~~  976 (1078)
                      +||+..||+..|..|...      + -.+..||+.|||+..   |..| .....-++.+|+..|+...|.++.|      
T Consensus       540 ~~qa~~rg~~~r~~~~~~~~fl~~~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~------  613 (1401)
T KOG2128|consen  540 RIQASERGFSTRNKFRSRLDFLKKQTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSR------  613 (1401)
T ss_pred             hhhhhccccchHHHHHhhhhHHHhcCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHH------
Confidence            449999999888766442      2 467889999999985   2222 2233478899999999888655443      


Q ss_pred             cCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 001436          977 LGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLT 1032 (1078)
Q Consensus       977 ~~~~~~~~~~~~~e~e~~~lk~~r~q~e~r~~~A~~riQs~~r~~~aR~~y~r~l~ 1032 (1078)
                                             +.|.......+++.+|+..|...+|..|+.++.
T Consensus       614 -----------------------~~q~~~~~~~~~i~iqs~~r~f~~r~~y~~L~~  646 (1401)
T KOG2128|consen  614 -----------------------KLQYFKDNMTKIIKIQSKIRKFPNRKDYKLLFT  646 (1401)
T ss_pred             -----------------------HHHHHHHhhhhHHHHHHHHHhcccchHHHHHhc
Confidence                                   233444556889999999999999999999854

>PF08549 SWI-SNF_Ssr4: Fungal domain of unknown function (DUF1750); InterPro: IPR013859 This is a fungal protein of unknown function

Probab=90.78  E-value=0.56  Score=57.67  Aligned_cols=104  Identities=22%  Similarity=0.384  Sum_probs=68.3

Q ss_pred             CChHHHHHHHhccccee-----ecccCCCCCCCCceEe-ee--hhhhhhhhccCccceecCCCcchHhhhhhhccCCEee
Q 001436           27 LRPAEICEILCNYQKFH-----IASEPPSRPPSGSLFL-FD--RKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDV   98 (1078)
Q Consensus        27 ~~~~e~~~~l~~~~~~~-----~~~~~~~~p~~g~~~l-~~--r~~~~~~r~dg~~w~k~~~~~~~~e~h~~lk~~~~~~   98 (1078)
                      |..++|+++|..-.+.-     +.-.=-.+|+-|+||| |-  -++.-.|-.|||.|.-       -|.--+..|+|..+
T Consensus        30 l~~~~~~~~Ll~ap~i~r~~~P~~WtylD~P~DGtv~L~wqp~~~lg~~fasDGy~wad-------~E~~y~~~~~G~~l  102 (669)
T PF08549_consen   30 LPPETVVEYLLKAPQIARDTAPFFWTYLDKPPDGTVLLTWQPLNRLGTNFASDGYVWAD-------PEQAYTHEVNGYTL  102 (669)
T ss_pred             CCHHHHHHHHHhchhhhccCCCeEeecccCCCCCcEEEEecCchhcCCcCCCCcceecC-------hhheeeecCCCeEE
Confidence            56667777776644311     1111146789999986 43  2445779999999974       25555566666542


Q ss_pred             --E---EEEeecccCCcccceeeeecccCCC---------cceEEEEeeeccC
Q 001436           99 --L---HCYYAHGEDNENFQRRCYWMLEQDL---------MHIVFVHYLEVQG  137 (1078)
Q Consensus        99 --~---~~~y~~~~~~~~f~rr~y~~~~~~~---------~~ivlvhy~~~~~  137 (1078)
                        .   ++|+-=+|.....-||.|-|+-...         +..+||||---..
T Consensus       103 Ei~~~k~G~~p~~e~~a~h~RrRyRL~~~~~p~pn~P~~DpsLwiVHY~~a~~  155 (669)
T PF08549_consen  103 EIYEHKSGYHPPGEQYASHSRRRYRLVPGKVPNPNAPPPDPSLWIVHYGPAPP  155 (669)
T ss_pred             EEEEeecCcCCCCCchhheeeeeeEecCCCCCCCCCCCCCCcEEEEEecCCCc
Confidence              2   1233337888899999999996543         4689999987654

>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR)

Probab=89.83  E-value=0.065  Score=50.45  Aligned_cols=61  Identities=15%  Similarity=0.211  Sum_probs=43.9

Q ss_pred             EEEeecCCCCCCCCCeeEEEeccccccccccccchhhhhcCCchHHHH---HHHCCCCccCCCCCC
Q 001436          493 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAE---VLADGVLCCRIPPHA  555 (1078)
Q Consensus       493 sI~dfsP~wa~~~ggtKVlI~G~f~~~~~~~~~~~~Ac~fG~veVv~~---LLq~Gv~rC~~p~~~  555 (1078)
                      .|+.|+|..++..|||.|.|+|..|.....  .....++.|..+....   ......+.|..++..
T Consensus         2 ~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~~--~~~~~V~ig~~~C~i~~~~~~~~~~I~C~t~~~~   65 (94)
T cd01180           2 VITEFFPLSGPLEGGTRLTICGSNLGLRKN--DVRHGVRVGGVPCNPEPPEYSSSEKIVCTTGPAG   65 (94)
T ss_pred             eeEEEeCCCCCCCCCEEEEEEEEcCCCCcc--cceeEEEECCEECcccCCCcCcCCEEEEECCCCC
Confidence            599999999999999999999999887531  1234567777754432   234456788887643

Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.

>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins

Probab=89.55  E-value=0.15  Score=47.03  Aligned_cols=59  Identities=20%  Similarity=0.216  Sum_probs=47.2

Q ss_pred             EEEeecCCCCCCCCCeeEEEeccccccccccccchhhhhcCCchHHHHHHHCCCCccCCCCCC
Q 001436          493 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHA  555 (1078)
Q Consensus       493 sI~dfsP~wa~~~ggtKVlI~G~f~~~~~~~~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~  555 (1078)
                      .|+.|+|.+++..||+.|.|.|..+....    ....|.+|..++...-+....+.|..|+..
T Consensus         2 ~I~~i~P~~g~~~Ggt~vtI~G~~f~~~~----~~~~V~ig~~~C~~~~~~~~~i~C~~p~~~   60 (90)
T cd00603           2 VITSISPSSGPLSGGTRLTITGSNLGSGS----PRVRVTVGGVPCKVLNVSSTEIVCRTPAAA   60 (90)
T ss_pred             eEEEEcCCCCCCCCCeEEEEEEECCCCCC----ceEEEEECCEECcEEecCCCEEEEECCCCC
Confidence            68999999999999999999998887643    246788999876654456677889888743

This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.

>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR)

Probab=88.10  E-value=0.31  Score=46.51  Aligned_cols=58  Identities=24%  Similarity=0.495  Sum_probs=39.4

Q ss_pred             EEEeecCCCCCCCCCeeEEEeccccccccccccchhhhhcCCch-HHHHHHHCCCCccCCCC
Q 001436          493 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVE-VPAEVLADGVLCCRIPP  553 (1078)
Q Consensus       493 sI~dfsP~wa~~~ggtKVlI~G~f~~~~~~~~~~~~Ac~fG~ve-Vv~~LLq~Gv~rC~~p~  553 (1078)
                      .|++++|.|++..||+.|.|+|..+..-..   ....+.+++.. +.-.+.....+.|..|+
T Consensus         2 ~I~~i~P~~g~~SGGt~itV~G~~Lds~q~---p~~~V~~~~~~~~~C~v~s~~~i~C~tP~   60 (99)
T cd01181           2 TITRIEPEWSFLSGGTPITVTGTNLNTVQE---PRIRVKYGGVEKTSCKVRNSTLMTCPAPS   60 (99)
T ss_pred             EEEEeccCCCccCCCEEEEEEeeccCcccc---cEEEEEECCceeccceeCCCCEEEeCCCC
Confidence            689999999999999999999999886541   23455566531 11111334556677665

Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=82.04  E-value=4  Score=44.32  Aligned_cols=93  Identities=10%  Similarity=0.048  Sum_probs=62.1

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCccccCC----CCchHHHHHHH--cCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCC
Q 001436          696 QGVLHLAASLGYDWAIKPTVTAGVSINFRDL----SGWTALHWAAY--CGREKTVAVLLSLG-AAPGLLTDPSPEFPLSR  768 (1078)
Q Consensus       696 ~TpLH~Aa~~G~~~iv~~LL~~Gadin~~D~----~G~TpLH~Aa~--~G~~eiV~~LL~~G-Advn~~~d~~~~D~~G~  768 (1078)
                      .++|-+|...+..+++-+|+.. .+....|.    .+.--+-|+..  .-...+.+..|.+| +++|.   +-.+-+.|.
T Consensus       180 ~~Am~~si~~~K~dva~~lls~-f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~---~F~~~NSGd  255 (284)
T PF06128_consen  180 HQAMWLSIGNAKEDVALYLLSK-FNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNK---KFQKVNSGD  255 (284)
T ss_pred             HHHHHHHhcccHHHHHHHHHhh-cceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccch---hhhccCCcc
Confidence            4677777777777777777754 11111221    12223344433  33567888888888 56665   333556899


Q ss_pred             CHHHHHHhcCcHHHHHHHHHcCCC
Q 001436          769 TPSDLASSNGHKGISGFLAESSLT  792 (1078)
Q Consensus       769 TPLhlAa~~G~~~iv~~LLe~ga~  792 (1078)
                      |-|+-|.+.++.+++.+||++|+.
T Consensus       256 tMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  256 TMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             hHHHhHHhcCcHHHHHHHHHcCcc
Confidence            999999999999999999999975

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	1078
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		6e-10
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-09
2cxk_A	95	Crystal Structure Of The Tig Domain Of Human Calmod		4e-08
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		1e-07
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		6e-07
2xee_A	157	Structural Determinants For Improved Thermal Stabil		6e-07
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		1e-06
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-06
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-06
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		4e-06
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		5e-06
1ycs_B	239	P53-53bp2 Complex Length = 239		5e-06
2dfs_A	1080	3-D Structure Of Myosin-V Inhibited State Length =		7e-06
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		8e-06
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		8e-06
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		2e-05
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		2e-05
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		4e-05
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		4e-05
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		5e-05
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		5e-05
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		6e-05
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		7e-05
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		8e-05
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		9e-05
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		1e-04
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		1e-04
1uoh_A	226	Human Gankyrin Length = 226		2e-04
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		2e-04
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		2e-04
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		2e-04
2ix7_C	58	Structure Of Apo-Calmodulin Bound To Unconventional		2e-04
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		4e-04
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		6e-04

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 678 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 737
           ++ + E+G  P   D +G+  LH AA  G+   +K  ++ G   N +D  G T LH+AA 
Sbjct: 20  VKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAE 79
Query: 738 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            G ++ V +LLS GA      DP+ +    RTP   A+ NGHK I   L
Sbjct: 80  NGHKEIVKLLLSKGA------DPNAKDSDGRTPLHYAAENGHKEIVKLL 122

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 678 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 737
           ++ + E+G      D +G+  LHLAA  G+   +K  ++ G   N +D  G T LH AA 
Sbjct: 20  VKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAE 79
Query: 738 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            G ++ V +LLS GA      DP+ +    +TP  LA+ NGHK +   L
Sbjct: 80  NGHKEVVKLLLSQGA------DPNAKDSDGKTPLHLAAENGHKEVVKLL 122

>pdb|2CXK|A Chain A, Crystal Structure Of The Tig Domain Of Human Calmodulin- Binding Transcription Activator 1 (Camta1) Length = 95

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 494 IIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPP 553
           + D+SP+W+Y +  ++V++TG +    QE A   +SC+F ++ VPA ++  GVL C  P 
Sbjct: 9   VTDYSPEWSYPEGGVKVLITGPW----QE-ASNNYSCLFDQISVPASLIQPGVLRCYCPA 63
Query: 554 HAVGRVPFYITCSNRLACSEVREFDYIVG 582
           H  G V   +  +N++  + V  F+Y  G
Sbjct: 64  HDTGLVTLQVAFNNQIISNSV-VFEYKSG 91

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           DD+G   LHLAA +G+   ++  +  G  +N RD  GWT LH AA  G  + V VLL  G
Sbjct: 44  DDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAADNGHLEIVEVLLKYG 103
Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGH 779
           A      D + +     TP  LA+  GH
Sbjct: 104 A------DVNAQDAYGLTPLHLAADRGH 125

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D +G   LHLAA  G+   ++  + AG  +N +D  G+T LH AA  G  + V VLL  G
Sbjct: 65  DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAG 124
Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      D + +    +TP DLA   GH+ I+  L
Sbjct: 125 A------DVNAQDKFGKTPFDLAIREGHEDIAEVL 153

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D +G   LHLAA  G+   ++  + AG  +N +D  G+T LH AA  G  + V VLL  G
Sbjct: 65  DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAG 124
Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      D + +    +TP DLA  NG++ I+  L
Sbjct: 125 A------DVNAQDKFGKTPFDLAIDNGNEDIAEVL 153

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G+  LHLAA  G+   +K  + AG  +N +D +G T LH AA  G  + V +LL  G
Sbjct: 32  DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91
Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
           A      D + +    RTP  LA+ NGH  +   L E
Sbjct: 92  A------DVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 678 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 737
           ++ + E+G      D +G+  LH AA  G+   +K  ++ G  +N +D  G T LH+AA 
Sbjct: 20  VKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAK 79
Query: 738 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            G ++ V +L+S GA      D + +    RTP   A+  GHK I   L
Sbjct: 80  EGHKEIVKLLISKGA------DVNAKDSDGRTPLHYAAKEGHKEIVKLL 122

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 678 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 737
           ++ + E+G      D +G+  LH AA  G+   +K  ++ G  +N +D  G T LH AA 
Sbjct: 20  VKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAE 79
Query: 738 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            G ++ V +L+S GA      D + +    RTP   A+ NGHK +   L
Sbjct: 80  NGHKEVVKLLISKGA------DVNAKDSDGRTPLHHAAENGHKEVVKLL 122

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 695 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 754
           G+  LHLAA  G+   +K  + AG  +N +D +G T LH AA  G  + V +LL  GA  
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-- 59
Query: 755 GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
               D + +    RTP  LA+ NGH  +   L E
Sbjct: 60  ----DVNAKDKNGRTPLHLAARNGHLEVVKLLLE 89

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 677 LLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA 736
           L++++  +   P + +DEG   LH A   G+   +K  V  GV++N  D  GWT LH AA
Sbjct: 52  LVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAA 111
Query: 737 YCGREKTVAVLLSLGAAPGLLT 758
            C   +    L+  GAA   +T
Sbjct: 112 SCNNVQVCKFLVESGAAVFAMT 133

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 677 LLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA 736
           L++++  +   P + +DEG   LH A   G+   +K  V  GV++N  D  GWT LH AA
Sbjct: 52  LVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAA 111
Query: 737 YCGREKTVAVLLSLGAAPGLLT 758
            C   +    L+  GAA   +T
Sbjct: 112 SCNNVQVCKFLVESGAAVFAMT 133

>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 893 LRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQAR 942
           L  ++ D L  +A I+IQK  RGW  RK+++ +R+  + IQ +VRGHQAR
Sbjct: 759 LEKIRADKL-RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQAR 807

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 693 DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 752
           D G+ +L  AA  G D  ++  +  G  +N RD +GWT LH AA+ G  + V VLL  GA
Sbjct: 13  DLGKKLLE-AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGA 71
Query: 753 APGLLTDPSPEFPLSRTPSDLASSNGH 779
                 D + +  L  TP  LA+  GH
Sbjct: 72  ------DVNAKDSLGVTPLHLAARRGH 92

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 678 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 737
           +R +  +G     +DD G   LHLAA  G+   ++  +  G  +N RD+ G T LH AA 
Sbjct: 30  VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAAT 89
Query: 738 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            G  + V VLL  GA      D + +    +T  D++  NG++ ++  L
Sbjct: 90  VGHLEIVEVLLEYGA------DVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D+ G   LHLAA  G+   ++  +  G  +N +D  G+T LH AAY G  + V VLL  G
Sbjct: 77  DNYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYG 136
Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      D + +    +T  D++  NG++ ++  L
Sbjct: 137 A------DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 695 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 754
           G   LH+AA+ GY   +K  + A   +N +D  GWT LH AA+ G+E+   +L+      
Sbjct: 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVE----- 253
Query: 755 GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
             L D      + +T  D+A  +    I G+L E
Sbjct: 254 -NLCDMEAVNKVGQTAFDVADED----ILGYLEE 282

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 693 DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 752
           D G+ +L  AA  G D  ++  +  G  +N  D  GWT LH AAY G  + V VLL  GA
Sbjct: 13  DLGKKLLE-AARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGA 71
Query: 753 APGLLTDPSPEFPLSRTPSDLASSNGH 779
                 D + +  L  TP  LA+  GH
Sbjct: 72  ------DVNADDSLGVTPLHLAADRGH 92

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 691 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL 750
           LD  G   LHLAA  G+   ++  +  G  +N  D  G T LH AA  G  + V VLL  
Sbjct: 76  LDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKY 135
Query: 751 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           GA      D + +    +T  D++  NG++ ++  L
Sbjct: 136 GA------DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 678 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 737
           +R +  +G     +DD G   LHLAA  G+   ++  +  G  +N  D+ G T LH AA 
Sbjct: 30  VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAAT 89
Query: 738 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            G  + V VLL  GA      D + +    +T  D++  NG++ ++  L
Sbjct: 90  VGHLEIVEVLLEYGA------DVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D +G   LHLAA  G+   ++  + AG  +N +D  G+T LH AA  G  + V VLL  G
Sbjct: 77  DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAG 136
Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      D + +    +T  D++  NG++ ++  L
Sbjct: 137 A------DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 691 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL 750
           +D  G   LHLAASLG+   ++  +  G  +N +D +G T L+ AAY G  + V VLL  
Sbjct: 64  VDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKH 123
Query: 751 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           GA      D + +    +T  D++   G++ ++  L
Sbjct: 124 GA------DVNAQDKFGKTAFDISIDIGNEDLAEIL 153

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G   LHLAA  G+   ++  +  G  +N +D +G T LH AA  G  + V VLL  G
Sbjct: 77  DTLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYG 136
Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      D + +    +T  D++ +NG++ ++  L
Sbjct: 137 A------DVNAQDKFGKTAFDISINNGNEDLAEIL 165

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 678 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 737
           +R +  +G     LD++G   LHLAA LG+   ++  +  G  +N  D  G T LH AA 
Sbjct: 30  VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 738 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            G  + V VLL  GA      D + +    +T  D++  NG++ ++  L
Sbjct: 90  RGHLEIVEVLLKHGA------DVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D++G   LHLAAS G+   ++  +  G  +N  DL+G T LH AA  G  + V VLL  G
Sbjct: 44  DNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGHLEIVEVLLKHG 103
Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGH 779
           A      D +       TP  LA+  GH
Sbjct: 104 A------DVNAYDNDGHTPLHLAAKYGH 125

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           DD G   LH+AAS G D  +K  +  G  +N  + +G T LH+AA   R +   +LL  G
Sbjct: 70  DDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 129
Query: 752 AAP 754
           A P
Sbjct: 130 ANP 132

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           DD G   LH+AAS G D  +K  +  G  +N  + +G T LH+AA   R +   +LL  G
Sbjct: 70  DDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 129
Query: 752 AAP 754
           A P
Sbjct: 130 ANP 132

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           DD G   LH+AAS G D  +K  +  G  +N  + +G T LH+AA   R +   +LL  G
Sbjct: 70  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 129
Query: 752 AAP 754
           A P
Sbjct: 130 ANP 132

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           DD G   LH+AAS G D  +K  +  G  +N  + +G T LH+AA   R +   +LL  G
Sbjct: 71  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 130
Query: 752 AAP 754
           A P
Sbjct: 131 ANP 133

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 678 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 737
           +R +  +G     +DD G   LHLAA  G+   ++  +  G  +N  D  G T LH AA 
Sbjct: 30  VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAAT 89
Query: 738 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            G  + V VLL  GA      D + +    +T  D++  NG++ ++  L
Sbjct: 90  VGHLEIVEVLLEYGA------DVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G   LHLAA  G+   ++  +  G  +N  D +GWT LH AA  G+ + V VLL  G
Sbjct: 69  DSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHG 128
Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      D + +  L  T  D++ + G + ++  L
Sbjct: 129 A------DVNAQDALGLTAFDISINQGQEDLAEIL 157

>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 58

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 904 SAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQAR 942
           +A I+IQK  RGW  RK +L +++  + +Q +VRG+QAR
Sbjct: 6   AACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQAR 44

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G   LHLAA  G+   ++  +  G  +N  D  G+T LH AA  G  + V VLL  G
Sbjct: 77  DKSGWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYG 136
Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      D + +    +T  D++  NG++ ++  L
Sbjct: 137 A------DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G   LHLAA  G+   ++  +  G  +N  D  G+T LH AA  G  + V VLL  G
Sbjct: 77  DKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYG 136
Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      D + +    +T  D++  NG++ ++  L
Sbjct: 137 A------DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	1078
2cxk_A	95	Camta1, calmodulin binding transcription activator	9e-32
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	2e-18
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	4e-04
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	6e-13
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	8e-11
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-06
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-06
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	6e-13
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-10
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	7e-09
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	6e-13
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	9e-11
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-09
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-12
3v30_A	172	DNA-binding protein rfxank; structural genomics co	5e-10
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-09
3v30_A	172	DNA-binding protein rfxank; structural genomics co	7e-08
3v30_A	172	DNA-binding protein rfxank; structural genomics co	7e-05
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-12
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-12
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-11
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-09
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-08
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	7e-06
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	7e-12
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-11
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-10
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	5e-08
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-08
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-06
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-05
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	8e-12
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-10
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-07
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-07
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-07
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	4e-06
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	8e-12
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-10
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-09
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-09
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	8e-09
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-06
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-06
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	9e-06
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-04
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-11
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-10
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	8e-09
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	4e-08
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-05
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	7e-04
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-11
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-10
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-09
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-05
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-11
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-10
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-10
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	6e-10
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-11
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	5e-11
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-04
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-11
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	9e-11
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	3e-10
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-08
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	8e-08
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-06
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-11
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-10
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-10
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-09
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	9e-09
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-08
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-11
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-11
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	6e-11
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-09
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	7e-09
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-11
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-09
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	5e-05
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-11
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-10
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-09
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	7e-09
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-07
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	8e-05
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-11
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-09
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	6e-09
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-08
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-08
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-06
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	8e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-11
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-11
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	9e-11
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-07
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-06
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-11
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	5e-11
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-09
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	7e-09
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-08
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-06
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-06
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	5e-11
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-09
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-09
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	7e-07
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-04
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	5e-11
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-08
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-07
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	6e-04
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	7e-11
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-10
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-10
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	6e-10
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	7e-09
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-06
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-06
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	9e-11
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-09
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-08
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-08
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	9e-11
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-10
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	9e-10
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	7e-09
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-08
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	8e-08
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	7e-07
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	9e-07
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	9e-11
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-10
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-09
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-09
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-08
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-10
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-10
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-09
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-08
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-05
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-10
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-10
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	9e-08
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-07
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-07
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-07
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-06
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-10
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	9e-10
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-09
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	3e-09
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-09
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	3e-06
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-04
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-10
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	8e-09
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-08
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	5e-08
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-06
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-10
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	7e-10
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-09
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-04
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-10
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-10
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-09
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	9e-08
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-06
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-10
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	8e-10
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-09
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-07
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-10
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-09
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-07
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-07
3hra_A	201	Ankyrin repeat family protein; structural protein;	5e-06
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-04
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	3e-10
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	8e-09
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	6e-05
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	5e-04
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-10
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-08
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	5e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-08
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-10
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-09
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	4e-06
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	7e-10
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-09
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	5e-09
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	8e-06
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-09
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	4e-09
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-08
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-07
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-09
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-09
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	7e-09
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-08
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	6e-08
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-07
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-09
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-09
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-09
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-09
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	3e-06
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-09
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	4e-08
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-05
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	9e-04
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-09
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	6e-08
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-06
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-04
2rfa_A	232	Transient receptor potential cation channel subfa	3e-09
2rfa_A	232	Transient receptor potential cation channel subfa	1e-08
2rfa_A	232	Transient receptor potential cation channel subfa	2e-08
2rfa_A	232	Transient receptor potential cation channel subfa	6e-08
2rfa_A	232	Transient receptor potential cation channel subfa	6e-06
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	3e-09
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	9e-09
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-08
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-08
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	3e-08
2pnn_A	273	Transient receptor potential cation channel subfa	3e-07
2pnn_A	273	Transient receptor potential cation channel subfa	4e-07
2pnn_A	273	Transient receptor potential cation channel subfa	7e-07
2pnn_A	273	Transient receptor potential cation channel subfa	2e-05
2etb_A	256	Transient receptor potential cation channel subfam	3e-07
2etb_A	256	Transient receptor potential cation channel subfam	4e-07
2etb_A	256	Transient receptor potential cation channel subfam	2e-06
2etb_A	256	Transient receptor potential cation channel subfam	5e-06
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	6e-07
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-06
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-05
3jxi_A	260	Vanilloid receptor-related osmotically activated p	3e-05
3jxi_A	260	Vanilloid receptor-related osmotically activated p	6e-05
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-05
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	2e-05
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	1e-05
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-05
3muj_A	138	Transcription factor COE3; immunoglobulin like fol	6e-05

>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1 Length = 95

 Score =  118 bits (297), Expect = 9e-32
 Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 6/93 (6%)

Query: 487 SQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGV 546
           S      + D+SP+W+Y +  ++V++TG + ++        +SC+F ++ VPA ++  GV
Sbjct: 2   SSGSSGMVTDYSPEWSYPEGGVKVLITGPWQEA-----SNNYSCLFDQISVPASLIQPGV 56

Query: 547 LCCRIPPHAVGRVPFYITCSNRLACSEVREFDY 579
           L C  P H  G V   +  +N++  + V  F+Y
Sbjct: 57  LRCYCPAHDTGLVTLQVAFNNQIISNSV-VFEY 88

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 79.1 bits (196), Expect = 2e-18
 Identities = 18/44 (40%), Positives = 29/44 (65%)

Query: 903 HSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYR 946
            +A I+IQK  RGW  RK +L +++  + +Q +VRG+QAR   +
Sbjct: 5   RAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAK 48

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 925 IRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRW--RRKGSGLR 970
           +R   ++IQ  +RG   RK+Y  +  +   +++ +  +  R     LR
Sbjct: 4   LRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLR 51

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 66.3 bits (163), Expect = 6e-13
 Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 6/91 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G   LH A + G+   ++  +     +N       + LH AA  G    V +LLS G
Sbjct: 40  DHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYG 99

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 782
           A+   +            P D       K +
Sbjct: 100 ASRNAVNI------FGLRPVDYTDDESMKSL 124

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 59.7 bits (146), Expect = 8e-11
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 18/97 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           +  G+ +LH+A+  G   +++  +  G   N +D +GWT LH A   G  K V +LL   
Sbjct: 7   NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK 66

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGI 782
           A                      +P   A+ NGH  I
Sbjct: 67  ALVNTTGYQN------------DSPLHDAAKNGHVDI 91

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 48.2 bits (116), Expect = 1e-06
 Identities = 10/61 (16%), Positives = 23/61 (37%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
             +    LH AA  G+   +K  ++ G S N  ++ G   + +      +  + +     
Sbjct: 73  GYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132

Query: 752 A 752
           +
Sbjct: 133 S 133

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 47.8 bits (115), Expect = 1e-06
 Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 19/75 (25%)

Query: 718 GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPS 771
           G+     +  G T LH A+  G   +V  LL  G+ P      G             TP 
Sbjct: 1   GIDPF-TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAG------------WTPL 47

Query: 772 DLASSNGHKGISGFL 786
             A ++GH  +   L
Sbjct: 48  HEACNHGHLKVVELL 62

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 68.8 bits (169), Expect = 6e-13
 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 7/98 (7%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDL-SGWTALHWAAYCGREKTVAVLLSL 750
           D+ G+  L   A LG D  ++    AG  ++ RD+  G TALH AA   R + V  L+ L
Sbjct: 74  DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL 133

Query: 751 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
           GA   +  +         T  +LA         G   +
Sbjct: 134 GADIEVEDE------RGLTALELAREILKTTPKGNPMQ 165

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 61.8 bits (151), Expect = 1e-10
 Identities = 20/102 (19%), Positives = 35/102 (34%), Gaps = 14/102 (13%)

Query: 691 LDDEGQGVLHLAASLGYDWAIKPTVT---AGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
           +  E +     AA        +  ++       ++  D +G TAL + A  G +K V +L
Sbjct: 41  VVSEYETPWWTAARKAD----EQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLL 96

Query: 748 LSLGAAPGLLTDP-SPEFPLSRTPSDLASSNGHKGISGFLAE 788
              GA      D    +     T   +A+      +   L E
Sbjct: 97  AEAGA------DLDHRDMRGGLTALHMAAGYVRPEVVEALVE 132

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 56.8 bits (138), Expect = 7e-09
 Identities = 14/58 (24%), Positives = 17/58 (29%), Gaps = 8/58 (13%)

Query: 699 LHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 752
           LH+AA           V      G  I   D  G TAL  A    +       +  G 
Sbjct: 115 LHMAAGYVR----PEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGR 168

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 67.5 bits (166), Expect = 6e-13
 Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 19/104 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDL-SGWTALHWAAYCGREKTVAVLLSL 750
           D+ G+  L   A LG D  ++    AG  ++ RD+  G TALH AA   R + V  L+ L
Sbjct: 73  DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL 132

Query: 751 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
           GA        G             T  +LA         G   +
Sbjct: 133 GADIEVEDERG------------LTALELAREILKTTPKGNPMQ 164

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 61.0 bits (149), Expect = 9e-11
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 26/105 (24%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVT---AGVSINFRDLSGWTALHWAAYCGREKTVAVLL 748
             E +     AA        +  ++       ++  D +G TAL + A  G +K V +L 
Sbjct: 41  VSEYETPWWTAARKAD----EQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLA 96

Query: 749 SLGAAP-------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
             GA         G             T   +A+      +   L
Sbjct: 97  EAGADLDHRDMRGG------------LTALHMAAGYVRPEVVEAL 129

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 57.9 bits (141), Expect = 1e-09
 Identities = 14/54 (25%), Positives = 19/54 (35%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 752
           LH+AA       ++  V  G  I   D  G TAL  A    +       +  G 
Sbjct: 114 LHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGR 167

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 65.5 bits (161), Expect = 2e-12
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
             E +  L LA++ GY   +   +   V IN  D +G T L +A      K V  LL+ G
Sbjct: 66  AKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG 125

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 782
           A      D + E     TP DLA + G++ +
Sbjct: 126 A------DLTTEADSGYTPMDLAVALGYRKV 150

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 58.6 bits (143), Expect = 5e-10
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 699 LHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLL 757
           +H  A+ G    +K  +  G   +N  D  G+T L WA+  G  +TV  LL  GA P +L
Sbjct: 6   IHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHIL 65

Query: 758 TDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                      +   LAS+ G+  I G L
Sbjct: 66  AK------ERESALSLASTGGYTDIVGLL 88

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 56.3 bits (137), Expect = 3e-09
 Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 18/97 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D+ G   L  A++ G    ++  +  G   +       +AL  A+  G    V +LL   
Sbjct: 33  DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD 92

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGI 782
                    G             TP   A    H   
Sbjct: 93  VDINIYDWNG------------GTPLLYAVRGNHVKC 117

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 52.4 bits (127), Expect = 7e-08
 Identities = 12/61 (19%), Positives = 21/61 (34%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G   L  A    +   ++  +  G  +     SG+T +  A   G  K   V+ +  
Sbjct: 99  DWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHI 158

Query: 752 A 752
            
Sbjct: 159 L 159

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 43.6 bits (104), Expect = 7e-05
 Identities = 11/55 (20%), Positives = 15/55 (27%), Gaps = 5/55 (9%)

Query: 728 GWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 782
              ++H  A  G    +   L  G       D         TP   AS+ G    
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDER-----GFTPLIWASAFGEIET 51

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 63.4 bits (155), Expect = 3e-12
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
             +    L  AA  G D  ++  +  G  +  +D +G T LH AA  G  + V +LL  G
Sbjct: 21  GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG 80

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      D   +    +T  D++  NG++ ++  L
Sbjct: 81  A------DVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 64.7 bits (159), Expect = 4e-12
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
               +  L LA S GY   +K  +  GV +N  D +G T L +A +    K V +LL  G
Sbjct: 66  GKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG 125

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      DP+ E        DLA + G++ +   +
Sbjct: 126 A------DPTIETDSGYNSMDLAVALGYRSVQQVI 154

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 62.8 bits (154), Expect = 2e-11
 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 758
           +H  A+ G    +   +     IN  D  G+T L WAA  G+   V  LL  GA P LL 
Sbjct: 7   VHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG 66

Query: 759 DPSPEFPLSRTPSDLASSNGHKGI 782
                     +   LA S G+  I
Sbjct: 67  K------GRESALSLACSKGYTDI 84

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 56.2 bits (137), Expect = 3e-09
 Identities = 22/101 (21%), Positives = 29/101 (28%), Gaps = 18/101 (17%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D+EG   L  AA+ G    ++  +  G           +AL  A   G    V +LL  G
Sbjct: 33  DEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCG 92

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                    G             TP   A    H      L
Sbjct: 93  VDVNEYDWNG------------GTPLLYAVHGNHVKCVKML 121

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 53.5 bits (130), Expect = 3e-08
 Identities = 12/61 (19%), Positives = 20/61 (32%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G   L  A    +   +K  + +G        SG+ ++  A   G      V+ S  
Sbjct: 99  DWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHL 158

Query: 752 A 752
            
Sbjct: 159 L 159

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 46.2 bits (111), Expect = 7e-06
 Identities = 11/66 (16%), Positives = 20/66 (30%), Gaps = 18/66 (27%)

Query: 727 SGWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHK 780
           +   ++H  A  G    +A  +            G             TP   A+++G  
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEG------------FTPLMWAAAHGQI 49

Query: 781 GISGFL 786
            +  FL
Sbjct: 50  AVVEFL 55

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 66.0 bits (162), Expect = 7e-12
 Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 18/101 (17%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           DD G+  LH AA++    A    +  G + + ++    T L  AA  G  +T  VLL   
Sbjct: 154 DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 213

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A                     R P D+A    H  I   L
Sbjct: 214 ANRDITDHMD------------RLPRDIAQERMHHDIVRLL 242

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 62.9 bits (154), Expect = 6e-11
 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
             +G   L LAA L  +  ++  + +   +N  D  G +ALHWAA         VLL  G
Sbjct: 121 MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG 180

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A   +  +         TP  LA+  G    +  L
Sbjct: 181 ANKDMQNN------REETPLFLAAREGSYETAKVL 209

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 62.1 bits (152), Expect = 1e-10
 Identities = 26/102 (25%), Positives = 35/102 (34%), Gaps = 19/102 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G+  LHLAA      A K  + A    N +D  G T LH A     +    +L+   
Sbjct: 54  DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 113

Query: 752 AAP-------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A         G             TP  LA+    +G+   L
Sbjct: 114 ATDLDARMHDG------------TTPLILAARLAVEGMLEDL 143

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 54.4 bits (132), Expect = 5e-08
 Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 15/100 (15%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV-----TAGVSINFRDLSGWTALHWAAYCGREKTVAV 746
           D+ G+  LH A S       +             ++ R   G T L  AA    E  +  
Sbjct: 87  DNMGRTPLHAAVSADA----QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLED 142

Query: 747 LLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           L++  A    + D      L ++    A++  +   +  L
Sbjct: 143 LINSHADVNAVDD------LGKSALHWAAAVNNVDAAVVL 176

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 53.6 bits (130), Expect = 8e-08
 Identities = 27/115 (23%), Positives = 35/115 (30%), Gaps = 32/115 (27%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTA-------------GVSI-NFRDLSGWTALHWAAY 737
             +G   L +A+  G       +                G S+ N  D +G TALH AA 
Sbjct: 7   GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAAR 66

Query: 738 CGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
             R      LL   A        G            RTP   A S   +G+   L
Sbjct: 67  YSRSDAAKRLLEASADANIQDNMG------------RTPLHAAVSADAQGVFQIL 109

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 50.2 bits (121), Expect = 1e-06
 Identities = 10/67 (14%), Positives = 16/67 (23%), Gaps = 8/67 (11%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
           ++  +  L LAA  G       T         + +  D         A        V +L
Sbjct: 187 NNREETPLFLAAREGS----YETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242

Query: 748 LSLGAAP 754
                  
Sbjct: 243 DLEHHHH 249

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 45.9 bits (110), Expect = 3e-05
 Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 18/81 (22%)

Query: 719 VSINFRDLSGWTALHWAAYCG-------------REKTVAVLLSLGAAPGLLTDPSPEFP 765
           + +N R   G+T L  A+  G                 ++  +  GA+    TD + E  
Sbjct: 1   MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETA 60

Query: 766 LSRTPSDLASSNGHKGISGFL 786
           L      LA+       +  L
Sbjct: 61  LH-----LAARYSRSDAAKRL 76

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 66.4 bits (163), Expect = 8e-12
 Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 15/115 (13%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
              G   LH+AA+ GY   +K  + A   +N +D  GWT LH AA+ G+E+   +L+   
Sbjct: 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL 255

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADD 806
                +        + +T  D+A  +             L  L     +  S   
Sbjct: 256 CDMEAVNK------VGQTAFDVADEDILG---------YLEELQKKQNLLHSEKR 295

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 62.5 bits (153), Expect = 2e-10
 Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           + +G   LH A        +K  V  G +IN  D  GW  LH AA CG       L+S G
Sbjct: 70  NVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQG 129

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A  G +           TP D+A     + +    
Sbjct: 130 AHVGAVNS------EGDTPLDIAEEEAMEELLQNE 158

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 52.9 bits (128), Expect = 2e-07
 Identities = 18/96 (18%), Positives = 29/96 (30%), Gaps = 18/96 (18%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP---- 754
                 +    A +   +  ++      SG TALH AA  G  + + +L+          
Sbjct: 170 RKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD 229

Query: 755 --GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
             G             TP   A+  G +     L E
Sbjct: 230 YDG------------WTPLHAAAHWGKEEACRILVE 253

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 52.5 bits (127), Expect = 3e-07
 Identities = 24/100 (24%), Positives = 35/100 (35%), Gaps = 18/100 (18%)

Query: 693 DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 752
            +   V   A S G    +   +  G  IN+ ++ G TALH A        V  L+  GA
Sbjct: 38  FDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGA 97

Query: 753 AP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                   G              P   A+S G+  I+ +L
Sbjct: 98  NINQPDNEG------------WIPLHAAASCGYLDIAEYL 125

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 51.7 bits (125), Expect = 5e-07
 Identities = 21/116 (18%), Positives = 37/116 (31%), Gaps = 21/116 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D+EG   LH AAS GY    +  ++ G  +   +  G T L  A     E+ +   ++  
Sbjct: 103 DNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ 162

Query: 752 AAPGLLTDPSPEFPLS---------------------RTPSDLASSNGHKGISGFL 786
                      E  +                       T   +A++ G+  +   L
Sbjct: 163 GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 49.0 bits (118), Expect = 4e-06
 Identities = 20/101 (19%), Positives = 31/101 (30%), Gaps = 19/101 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D + +    L   +G +  ++P V        +   G   L  A   G  + V  LL  G
Sbjct: 5   DAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLA-ACSSGDTEEVLRLLERG 63

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A        GL            T    A  + +  +  FL
Sbjct: 64  ADINYANVDGL------------TALHQACIDDNVDMVKFL 92

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 67.1 bits (165), Expect = 8e-12
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G   LH A S G+    +  +  G  +N  DL  +T LH AA   R +  ++LLS G
Sbjct: 88  DKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHG 147

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A P L+          ++  D+A +   +    + 
Sbjct: 148 ADPTLVNC------HGKSAVDMAPTPELRERLTYE 176

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 63.3 bits (155), Expect = 1e-10
 Identities = 22/99 (22%), Positives = 32/99 (32%), Gaps = 11/99 (11%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVT----AGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
               +  LH A +  +    K         G ++N ++    T LH AA       + VL
Sbjct: 208 PQSHETALHCAVASLHP-KRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVL 266

Query: 748 LSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
              GA    L        L +T    A+  GH      L
Sbjct: 267 HKHGAKMNALDS------LGQTALHRAALAGHLQTCRLL 299

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 58.7 bits (143), Expect = 4e-09
 Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D      LHLAA       ++  +  G  ++ +D  G   LH A   G  +   +LL  G
Sbjct: 55  DGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHG 114

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A        +       TP   A+S     +   L
Sbjct: 115 A------CVNAMDLWQFTPLHEAASKNRVEVCSLL 143

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 57.9 bits (141), Expect = 7e-09
 Identities = 20/61 (32%), Positives = 31/61 (50%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           + +    LH+AA   ++  ++     G  +N  D  G TALH AA  G  +T  +LLS G
Sbjct: 244 NKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYG 303

Query: 752 A 752
           +
Sbjct: 304 S 304

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 57.5 bits (140), Expect = 8e-09
 Identities = 24/102 (23%), Positives = 34/102 (33%), Gaps = 19/102 (18%)

Query: 692 DDEGQGVLHLAASLG-YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL 750
            +  +  L  AA  G  +  +       V+ +  D    T LH AA   R + V +LL  
Sbjct: 21  GEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQH 80

Query: 751 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           GA        G              P   A S GH  ++  L
Sbjct: 81  GADVHAKDKGG------------LVPLHNACSYGHYEVTELL 110

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 51.3 bits (124), Expect = 1e-06
 Identities = 10/62 (16%), Positives = 18/62 (29%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D      LH AAS          ++ G      +  G +A+  A      + +       
Sbjct: 121 DLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGH 180

Query: 752 AA 753
           + 
Sbjct: 181 SL 182

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 48.6 bits (117), Expect = 7e-06
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 5/61 (8%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  GQ  LH AA  G+    +  ++ G   +   L G+TA          + V  +LS  
Sbjct: 277 DSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN-----EAVQQILSES 331

Query: 752 A 752
            
Sbjct: 332 T 332

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 48.3 bits (116), Expect = 9e-06
 Identities = 21/94 (22%), Positives = 32/94 (34%), Gaps = 9/94 (9%)

Query: 696 QGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA---YCGREKTVAVLLSLGA 752
              L  AA       +K T+   +    +  S  TALH A    +  R++   +LL  GA
Sbjct: 179 GHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGA 238

Query: 753 APGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                           TP  +A+   H  +   L
Sbjct: 239 NVNEKNK------DFMTPLHVAAERAHNDVMEVL 266

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 43.3 bits (103), Expect = 3e-04
 Identities = 18/93 (19%), Positives = 23/93 (24%), Gaps = 20/93 (21%)

Query: 695 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA-YCGREKTVAVLLSLGAA 753
           G+  L LA                             L  AA     EK +A+L  L   
Sbjct: 4   GKSALDLADP-------------SAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNV- 49

Query: 754 PGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                +         TP  LA+      I   L
Sbjct: 50  -----NCHASDGRKSTPLHLAAGYNRVRIVQLL 77

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 15/96 (15%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV-----TAGVSINFRDLSGWTALHWAAYCGREKTVAV 746
           D  G   L+ A   G+    K  V        + +N ++  G TALH AA+ G    V +
Sbjct: 103 DKAGSTALYWACHGGH----KDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQL 158

Query: 747 LLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 782
           LL+ GA   L           +   D+A++     +
Sbjct: 159 LLAKGARTDLRNI------EKKLAFDMATNAACASL 188

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 61.9 bits (151), Expect = 1e-10
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 5/91 (5%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
            +     LH AA  G    ++  +   V +N  D +G TAL+WA + G +  V +L +  
Sbjct: 70  AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQP 129

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 782
                  + + +  L  T    A+  G+  I
Sbjct: 130 NI-----ELNQQNKLGDTALHAAAWKGYADI 155

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 56.1 bits (136), Expect = 8e-09
 Identities = 14/88 (15%), Positives = 24/88 (27%), Gaps = 6/88 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           +  G   LH AA  GY   ++  +  G   + R++    A   A        +       
Sbjct: 137 NKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTD 196

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGH 779
           A   L               + +    H
Sbjct: 197 AVRTLSNAE------DYLDDEDSDLEHH 218

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 54.2 bits (131), Expect = 4e-08
 Identities = 17/91 (18%), Positives = 21/91 (23%), Gaps = 11/91 (12%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
            D          S G    I         +  +  S    LH AA  G    +   L   
Sbjct: 42  TDMSDTNWWKGTSKGRTGLIP-----SNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNR 96

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 782
                    +       T    A   GHK I
Sbjct: 97  V------GVNGLDKAGSTALYWACHGGHKDI 121

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 46.1 bits (110), Expect = 2e-05
 Identities = 11/56 (19%), Positives = 16/56 (28%), Gaps = 6/56 (10%)

Query: 728 GWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGIS 783
           G   +  A Y    +T   L           D      +S T     +S G  G+ 
Sbjct: 12  GQVKVFRALYTFEPRTPDELYIEEG------DIIYITDMSDTNWWKGTSKGRTGLI 61

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 41.5 bits (98), Expect = 7e-04
 Identities = 10/88 (11%), Positives = 15/88 (17%), Gaps = 11/88 (12%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 758
           +  A                  I +      T        GR   +         P    
Sbjct: 16  VFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLI---------PSNYV 66

Query: 759 DPSPEFPLSRTPSDLASSNGHKGISGFL 786
               E      P   A+  G+       
Sbjct: 67  AEQAES--IDNPLHEAAKRGNLSWLREC 92

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 64.9 bits (159), Expect = 1e-11
 Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
           +DEG   LH A   G+       V      GV++N  D  GWT LH AA C   +    L
Sbjct: 67  NDEGITALHNAVCAGH----TEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFL 122

Query: 748 LSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           +  GAA   +T    +              G+   S FL
Sbjct: 123 VESGAAVFAMTYSDMQTA---ADKCEEMEEGYTQCSQFL 158

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 60.3 bits (147), Expect = 4e-10
 Identities = 19/95 (20%), Positives = 27/95 (28%), Gaps = 7/95 (7%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           +  GQ  L               +  G+ + F  L     L  ++  G    V  ++   
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPL-PLALLLDSSLEGEFDLVQRIIYEV 60

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                  DPS       T    A   GH  I  FL
Sbjct: 61  D------DPSLPNDEGITALHNAVCAGHTEIVKFL 89

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 57.6 bits (140), Expect = 3e-09
 Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 18/101 (17%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           +     +L  ++  G    ++  +      +  +  G TALH A   G  + V  L+  G
Sbjct: 34  NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFG 93

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                    G             TP   A+S  +  +  FL
Sbjct: 94  VNVNAADSDG------------WTPLHCAASCNNVQVCKFL 122

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 45.7 bits (109), Expect = 3e-05
 Identities = 14/92 (15%), Positives = 22/92 (23%), Gaps = 9/92 (9%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSG---WTALHWAAYCGREKTVAVLL 748
           D +G   LH AAS       K  V +G ++     S              G  +    L 
Sbjct: 100 DSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLY 159

Query: 749 SLGAAPGLLTDPSPEFPLSRTPSDLASSNGHK 780
            +    G++                       
Sbjct: 160 GVQEKMGIMNKG------VIYALWDYEPQNDD 185

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 63.6 bits (156), Expect = 1e-11
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 26/107 (24%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
           +      LHLAAS G+    +  V         IN  +  G   LH+A + G+++    L
Sbjct: 69  NRGDDTPLHLAASHGH----RDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDL 124

Query: 748 LSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
           ++ GA        G              P D A +   + +     +
Sbjct: 125 VANGALVSICNKYG------------EMPVDKAKAPLRELLRERAEK 159

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 60.9 bits (149), Expect = 1e-10
 Identities = 16/88 (18%), Positives = 24/88 (27%), Gaps = 12/88 (13%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           ++ G   LH A   G D   +  V  G  ++  +  G   +  A    RE        +G
Sbjct: 102 NEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMG 161

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGH 779
                           R P       G 
Sbjct: 162 QNLN------------RIPYKDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 60.1 bits (147), Expect = 2e-10
 Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 19/102 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCGREKTVAVLLSL 750
             E    +      G   A++  +      +N  D  G++ LHWA   GR   V +L+  
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61

Query: 751 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           GA                      TP  LA+S+GH+ I   L
Sbjct: 62  GARINVMNRGD------------DTPLHLAASHGHRDIVQKL 91

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 58.6 bits (143), Expect = 6e-10
 Identities = 25/101 (24%), Positives = 31/101 (30%), Gaps = 18/101 (17%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           DD G   LH A   G    ++  +  G  IN  +    T LH AA  G    V  LL   
Sbjct: 36  DDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYK 95

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A        G              P   A   G   ++  L
Sbjct: 96  ADINAVNEHG------------NVPLHYACFWGQDQVAEDL 124

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 62.8 bits (154), Expect = 1e-11
 Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 18/101 (17%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
               +  LH+AAS G+   ++  +  G  +N +D+   TALHWA     ++ V +L+  G
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A                     +T  D++  NG++ ++  L
Sbjct: 124 ADVHTQSKFC------------KTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 60.9 bits (149), Expect = 5e-11
 Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 14/99 (14%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
           D  G   LHLAA  G+      T      AGVS + R     T LH AA  G    V VL
Sbjct: 31  DWLGTSPLHLAAQYGH----FSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVL 86

Query: 748 LSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           L  GA      D + +  L  T    A+ + H+ +   L
Sbjct: 87  LKHGA------DVNAKDMLKMTALHWATEHNHQEVVELL 119

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 42.0 bits (100), Expect = 2e-04
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 17/64 (26%)

Query: 728 GWTALHWAAYCGREKTVAVLLSLGA-----APGLLTDPSPEFPLSRTPSDLASSNGHKGI 782
               L  AA  G++  V +L++ GA       G             +P  LA+  GH   
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFTTDWLG------------TSPLHLAAQYGHFST 49

Query: 783 SGFL 786
           +  L
Sbjct: 50  TEVL 53

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 64.4 bits (158), Expect = 2e-11
 Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 18/101 (17%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           DD G+  LH AA++    A    +  G + + ++    T L  AA  G  +T  VLL   
Sbjct: 122 DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 181

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A                     R P D+A    H  I   L
Sbjct: 182 ANRDITDHMD------------RLPRDIAQERMHHDIVRLL 210

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 62.0 bits (152), Expect = 9e-11
 Identities = 26/102 (25%), Positives = 35/102 (34%), Gaps = 19/102 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G+  LHLAA      A K  + A    N +D  G T LH A     +    +L+   
Sbjct: 22  DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81

Query: 752 AAP-------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A         G             TP  LA+    +G+   L
Sbjct: 82  ATDLDARMHDG------------TTPLILAARLAVEGMLEDL 111

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 60.5 bits (148), Expect = 3e-10
 Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 18/101 (17%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
             +G   L LAA L  +  ++  + +   +N  D  G +ALHWAA         VLL  G
Sbjct: 89  MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG 148

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A                      TP  LA+  G    +  L
Sbjct: 149 ANKDMQNNRE------------ETPLFLAAREGSYETAKVL 177

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 53.2 bits (129), Expect = 7e-08
 Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 15/100 (15%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTA-----GVSINFRDLSGWTALHWAAYCGREKTVAV 746
           D+ G+  LH A S       +             ++ R   G T L  AA    E  +  
Sbjct: 55  DNMGRTPLHAAVSADA----QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLED 110

Query: 747 LLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           L++  A      D +    L ++    A++  +   +  L
Sbjct: 111 LINSHA------DVNAVDDLGKSALHWAAAVNNVDAAVVL 144

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 53.2 bits (129), Expect = 8e-08
 Identities = 10/61 (16%), Positives = 17/61 (27%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           ++  +  L LAA  G     K  +    + +  D         A        V +L    
Sbjct: 155 NNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214

Query: 752 A 752
            
Sbjct: 215 L 215

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 47.8 bits (115), Expect = 5e-06
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 718 GVSI-NFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS 776
           G S+ N  D +G TALH AA   R      LL   A      D + +  + RTP   A S
Sbjct: 14  GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA------DANIQDNMGRTPLHAAVS 67

Query: 777 NGHKGISGFL 786
              +G+   L
Sbjct: 68  ADAQGVFQIL 77

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 64.0 bits (157), Expect = 2e-11
 Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 10/99 (10%)

Query: 692 DDEGQGVLHLAASLGYDWA----IKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
           D++G   LH+A   G   A    +      G  ++  +    T LH A        V +L
Sbjct: 6   DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLL 65

Query: 748 LSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           ++ GA       P       +T + LA  +        L
Sbjct: 66  VTAGA------SPMALDRHGQTAAHLACEHRSPTCLRAL 98

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 60.5 bits (148), Expect = 3e-10
 Identities = 23/95 (24%), Positives = 32/95 (33%), Gaps = 2/95 (2%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           ++  Q  LHLA        ++  VTAG S    D  G TA H A        +  LL   
Sbjct: 43  NNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSA 102

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A   L  +         T   +A +   +     L
Sbjct: 103 APGTLDLEARNYD--GLTALHVAVNTECQETVQLL 135

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 60.5 bits (148), Expect = 3e-10
 Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 6/88 (6%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 758
           L  A        ++  +  G ++N +  SG +ALH A+  G    V  L+  GA   L  
Sbjct: 154 LIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN 213

Query: 759 DPSPEFPLSRTPSDLASSNGHKGISGFL 786
                   + TP  +A S     I    
Sbjct: 214 C------HNDTPLMVARSRRVIDILRGK 235

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 58.2 bits (142), Expect = 2e-09
 Identities = 25/104 (24%), Positives = 36/104 (34%), Gaps = 19/104 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV--------TAGVSINFRDLSGWTALHWAAYCGREKT 743
           D  GQ   HLA            +           + +  R+  G TALH A     ++T
Sbjct: 76  DRHGQTAAHLACEHRS----PTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQET 131

Query: 744 VAVLLSLGAAPGLLTDP-SPEFPLSRTPSDLASSNGHKGISGFL 786
           V +LL  GA      D  + +    R+P   A  N    +   L
Sbjct: 132 VQLLLERGA------DIDAVDIKSGRSPLIHAVENNSLSMVQLL 169

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 56.3 bits (137), Expect = 9e-09
 Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 19/102 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDL-SGWTALHWAAYCGREKTVAVLLSL 750
           + +G   LH+A +      ++  +  G  I+  D+ SG + L  A        V +LL  
Sbjct: 113 NYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQH 172

Query: 751 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           GA        G             +    AS  G   +   L
Sbjct: 173 GANVNAQMYSG------------SSALHSASGRGLLPLVRTL 202

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 54.0 bits (131), Expect = 5e-08
 Identities = 11/61 (18%), Positives = 20/61 (32%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
              G   LH A+  G    ++  V +G   + ++    T L  A        +    +  
Sbjct: 180 MYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239

Query: 752 A 752
           A
Sbjct: 240 A 240

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 63.7 bits (156), Expect = 2e-11
 Identities = 23/99 (23%), Positives = 31/99 (31%), Gaps = 10/99 (10%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
            ++G   LHLA            +         +NF++    T LH A    + +    L
Sbjct: 5   TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64

Query: 748 LSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           L  G  P L            TP  LA   G     G L
Sbjct: 65  LGAGCDPELRDF------RGNTPLHLACEQGCLASVGVL 97

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 63.3 bits (155), Expect = 4e-11
 Identities = 28/95 (29%), Positives = 36/95 (37%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           ++  Q  LHLA         +  + AG     RD  G T LH A   G   +V VL    
Sbjct: 42  NNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSC 101

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
             P L +          T   LAS +G+ GI   L
Sbjct: 102 TTPHLHSILKATNYNGHTCLHLASIHGYLGIVELL 136

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 62.6 bits (153), Expect = 6e-11
 Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 19/102 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLLSL 750
           +  G   LHLA+  GY   ++  V+ G  +N ++  +G TALH A        V++LL  
Sbjct: 114 NYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC 173

Query: 751 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           GA        G             +P  L        I   L
Sbjct: 174 GADVNRVTYQG------------YSPYQLTWGRPSTRIQQQL 203

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 58.7 bits (143), Expect = 2e-09
 Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 11/105 (10%)

Query: 688 PCILDDEGQGVLHLAASLGYDWAIK------PTVTAGVSINFRDLSGWTALHWAAYCGRE 741
           P + D  G   LHLA   G   ++        T      +   + +G T LH A+  G  
Sbjct: 71  PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYL 130

Query: 742 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
             V +L+SLGA        +      RT   LA    +  +   L
Sbjct: 131 GIVELLVSLGADVNAQEPCN-----GRTALHLAVDLQNPDLVSLL 170

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 56.4 bits (137), Expect = 7e-09
 Identities = 13/92 (14%), Positives = 24/92 (26%), Gaps = 6/92 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
              G+  LHLA  L     +   +  G  +N     G++           +    L  L 
Sbjct: 148 PCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLT 207

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGIS 783
                  +     P S       + +     +
Sbjct: 208 L------ENLQMLPESEDEESYDTESEFTEFT 233

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 60.9 bits (149), Expect = 3e-11
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 6/91 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
            + G+  LH AA  G    ++  +  G  IN  D    T L  A Y G    V +LLS G
Sbjct: 37  LEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKG 96

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 782
           A      D + + P   T  +   +   K +
Sbjct: 97  A------DKTVKGPDGLTAFEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 56.3 bits (137), Expect = 1e-09
 Identities = 24/90 (26%), Positives = 30/90 (33%), Gaps = 18/90 (20%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA---AP- 754
              A   G    +K  V  G  +N     G   LH+AA CG+ + +  LL  GA   AP 
Sbjct: 11  FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 70

Query: 755 --GLLTDPSPEFPLSRTPSDLASSNGHKGI 782
                           TP   A   GH   
Sbjct: 71  KHH------------ITPLLSAVYEGHVSC 88

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 43.2 bits (103), Expect = 5e-05
 Identities = 11/55 (20%), Positives = 15/55 (27%), Gaps = 6/55 (10%)

Query: 728 GWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 782
                 WA   G    V   ++ G       D +      R P   A+  G   I
Sbjct: 7   CDKEFMWALKNGDLDEVKDYVAKGE------DVNRTLEGGRKPLHYAADCGQLEI 55

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 64.4 bits (158), Expect = 3e-11
 Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 7/95 (7%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
             +    LH A   G+   +K  +  G  +N       T L  A   G    V +LL  G
Sbjct: 89  TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHG 148

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A+    +D         +P   A+  GH      L
Sbjct: 149 ASVQPESD-------LASPIHEAARRGHVECVNSL 176

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 62.9 bits (154), Expect = 1e-10
 Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 7/95 (7%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           + +    +H AA  G+   +   +  G +I+ +     T L+ A    +   V  LL  G
Sbjct: 154 ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESG 213

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A                +P         + ++  L
Sbjct: 214 ADVNQGKG-------QDSPLHAVVRTASEELACLL 241

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 59.8 bits (146), Expect = 1e-09
 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 6/88 (6%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 758
           +H AA  G+  +++  ++ G ++N       + LH A   G    V +LL  GA    +T
Sbjct: 63  MHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT 122

Query: 759 DPSPEFPLSRTPSDLASSNGHKGISGFL 786
                     TP   A  +G       L
Sbjct: 123 A------DWHTPLFNACVSGSWDCVNLL 144

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 57.1 bits (139), Expect = 7e-09
 Identities = 14/88 (15%), Positives = 26/88 (29%), Gaps = 7/88 (7%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
                  L+LA        +K  + +G  +N +     + LH       E+   +L+  G
Sbjct: 187 ISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFG 245

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGH 779
           A               + P +L      
Sbjct: 246 ADTQAKNA------EGKRPVELVPPESP 267

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 52.1 bits (126), Expect = 3e-07
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 9/95 (9%)

Query: 693 DEGQGVLHLAASLGY-DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  QG +  +   G  D+     ++  +  +      W+ +H AA  G + ++  L+S G
Sbjct: 25  DGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVS--DWSPMHEAAIHGHQLSLRNLISQG 82

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            A  ++T          +P   A   GH      L
Sbjct: 83  WAVNIITA------DHVSPLHEACLGGHLSCVKIL 111

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 44.8 bits (107), Expect = 8e-05
 Identities = 7/61 (11%), Positives = 13/61 (21%), Gaps = 1/61 (1%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
                  LH       +      +  G     ++  G   +           +  L   G
Sbjct: 219 GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQL-FLEREG 277

Query: 752 A 752
           A
Sbjct: 278 A 278

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 64.4 bits (158), Expect = 3e-11
 Identities = 25/99 (25%), Positives = 34/99 (34%), Gaps = 4/99 (4%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
              G     LAA  G    +K  ++ G  +N  D  G+TA   AA  G+ K +  L   G
Sbjct: 69  KKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG 128

Query: 752 AAP----GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A          D         T    A+  GH  +   L
Sbjct: 129 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKIL 167

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 58.6 bits (143), Expect = 2e-09
 Identities = 22/106 (20%), Positives = 29/106 (27%), Gaps = 23/106 (21%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
           D+ G+  L  A     D  ++         G  +N R   G T L  A        V  L
Sbjct: 179 DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238

Query: 748 LS-LGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           L             G            +T   LA     K I+  L
Sbjct: 239 LEQEHIEINDTDSDG------------KTALLLAVELKLKKIAELL 272

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 57.5 bits (140), Expect = 6e-09
 Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           ++ G   LH A  +  +  ++  +  G     R  +G T    AA  G  K + + LS G
Sbjct: 36  EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKG 95

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      D +       T    A+  G      FL
Sbjct: 96  A------DVNECDFYGFTAFMEAAVYGKVKALKFL 124

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 54.8 bits (133), Expect = 4e-08
 Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 9/66 (13%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV-----TAGVSINFRDLSGWTALHWAAYCGREKTVAV 746
            + G+  L LA    +       V        + IN  D  G TAL  A     +K   +
Sbjct: 216 GERGKTPLILAVEKKH----LGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAEL 271

Query: 747 LLSLGA 752
           L   GA
Sbjct: 272 LCKRGA 277

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 54.8 bits (133), Expect = 5e-08
 Identities = 25/119 (21%), Positives = 34/119 (28%), Gaps = 31/119 (26%)

Query: 683 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTV-----TAGVSINFRDLSGWTALHWAAY 737
           +  +    L   G   L  AA  G+       +       G  +N  D  G  AL  A  
Sbjct: 136 KTKEDQERLRKGGATALMDAAEKGH----VEVLKILLDEMGADVNACDNMGRNALIHALL 191

Query: 738 CGREKT----VAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
              +        +LL  GA        G            +TP  LA    H G+   L
Sbjct: 192 SSDDSDVEAITHLLLDHGADVNVRGERG------------KTPLILAVEKKHLGLVQRL 238

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 48.6 bits (117), Expect = 5e-06
 Identities = 27/123 (21%), Positives = 36/123 (29%), Gaps = 34/123 (27%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD----------LSGWTALHWAAYCGRE 741
           D  G      AA  G   A+K     G ++N R             G TAL  AA  G  
Sbjct: 102 DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 161

Query: 742 KTVAVLLS-LGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSL 794
           + + +LL  +GA        G            R     A  +        +       L
Sbjct: 162 EVLKILLDEMGADVNACDNMG------------RNALIHALLSSDDSDVEAITH-----L 204

Query: 795 LLS 797
           LL 
Sbjct: 205 LLD 207

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 41.7 bits (99), Expect = 8e-04
 Identities = 12/59 (20%), Positives = 14/59 (23%), Gaps = 5/59 (8%)

Query: 728 GWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
               L  A        V  LL  GA      +     PL       A     + I   L
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLH-----NAVQMSREDIVELL 58

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 65.6 bits (161), Expect = 4e-11
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
             + Q  LH AA +G+   +K  +    + N    +G T LH AA  G  +TV  LL   
Sbjct: 77  AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE 136

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A        +       TP  +A+  G   ++  L
Sbjct: 137 A------SQACMTKKGFTPLHVAAKYGKVRVAELL 165

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 65.2 bits (160), Expect = 4e-11
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
              G   LH+A+  G    +K  +     +N +   G++ LH AA  G    V +LL  G
Sbjct: 308 TRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG 367

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A+P  ++          TP  +A   G+  ++  L
Sbjct: 368 ASPNEVSS------DGTTPLAIAKRLGYISVTDVL 396

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 64.4 bits (158), Expect = 9e-11
 Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           + + +  LH+AA  G+    K  +     +N +     T LH AA  G    V +LL   
Sbjct: 44  NVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENN 103

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A P L T          TP  +A+  GH      L
Sbjct: 104 ANPNLATT------AGHTPLHIAAREGHVETVLAL 132

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 64.1 bits (157), Expect = 1e-10
 Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
              G   LH+AA  G+   +   +    S       G+T LH AA  G+ +   +LL   
Sbjct: 110 TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERD 169

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A       P+       TP  +A  + +  I   L
Sbjct: 170 A------HPNAAGKNGLTPLHVAVHHNNLDIVKLL 198

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 64.1 bits (157), Expect = 1e-10
 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           +  G   LHL A  G+       +  GV ++     G+T LH A++ G  K V  LL   
Sbjct: 275 NKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 334

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      D + +  L  +P   A+  GH  I   L
Sbjct: 335 A------DVNAKTKLGYSPLHQAAQQGHTDIVTLL 363

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 63.3 bits (155), Expect = 2e-10
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
            + G   LH+A+ +G+   +K  +  G S N  ++   T LH AA  G  +    LL   
Sbjct: 11  GESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNK 70

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A               +TP   A+  GH  +   L
Sbjct: 71  AKVNAKAK------DDQTPLHCAARIGHTNMVKLL 99

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 63.3 bits (155), Expect = 2e-10
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
             +G   LHLAA  G+   +   ++   + N  + SG T LH  A  G      VL+  G
Sbjct: 242 SVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG 301

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                         +  TP  +AS  G+  +  FL
Sbjct: 302 V------MVDATTRMGYTPLHVASHYGNIKLVKFL 330

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 62.5 bits (153), Expect = 3e-10
 Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
              G   LH+A        +K  +  G S +    +G+T LH AA   + +    LL  G
Sbjct: 176 GKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYG 235

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            +    +          TP  LA+  GH  +   L
Sbjct: 236 GSANAESV------QGVTPLHLAAQEGHAEMVALL 264

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 62.5 bits (153), Expect = 3e-10
 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
              G   LH+AA        +  +  G S N   + G T LH AA  G  + VA+LLS  
Sbjct: 209 AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQ 268

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A   L            TP  L +  GH  ++  L
Sbjct: 269 ANGNLGNK------SGLTPLHLVAQEGHVPVADVL 297

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 62.1 bits (152), Expect = 5e-10
 Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
             +G   LH+AA  G     +  +      N    +G T LH A +      V +LL  G
Sbjct: 143 TKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRG 202

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            +P              TP  +A+      ++  L
Sbjct: 203 GSPHSPAW------NGYTPLHIAAKQNQVEVARSL 231

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 54.4 bits (132), Expect = 1e-07
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 718 GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSN 777
           G+S      SG T LH A++ G    V  LL  GA       P+       TP  +A+  
Sbjct: 4   GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGA------SPNVSNVKVETPLHMAARA 57

Query: 778 GHKGISGFL 786
           GH  ++ +L
Sbjct: 58  GHTEVAKYL 66

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 50.6 bits (122), Expect = 2e-06
 Identities = 16/61 (26%), Positives = 20/61 (32%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
              G   LH AA  G+   +   +  G S N     G T L  A   G      VL  + 
Sbjct: 341 TKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT 400

Query: 752 A 752
            
Sbjct: 401 D 401

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 61.6 bits (151), Expect = 5e-11
 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G   L LAA  G+   ++  +  G  +N  D+ G T LH AA  G  + V VLL  G
Sbjct: 77  DHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG 136

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A        G            +T  D++  NG++ ++  L
Sbjct: 137 ADVNAQDKFG------------KTAFDISIDNGNEDLAEIL 165

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 57.4 bits (140), Expect = 1e-09
 Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G   LHLAA  G+   ++  +  G  +N  D +G T L  AA  G  + V VLL  G
Sbjct: 44  DASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNG 103

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      D +       TP  LA+  GH  I   L
Sbjct: 104 A------DVNANDMEGHTPLHLAAMFGHLEIVEVL 132

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 55.8 bits (136), Expect = 4e-09
 Identities = 32/94 (34%), Positives = 39/94 (41%), Gaps = 18/94 (19%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP---- 754
           L  AA  G D  ++  +  G  +N  D SGWT LH AA+ G  + V VLL  GA      
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD 77

Query: 755 --GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
             G             TP  LA+  GH  I   L
Sbjct: 78  HAG------------MTPLRLAALFGHLEIVEVL 99

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 49.3 bits (119), Expect = 7e-07
 Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 8/62 (12%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
           D EG   LHLAA  G+       V      G  +N +D  G TA   +   G E    +L
Sbjct: 110 DMEGHTPLHLAAMFGH----LEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165

Query: 748 LS 749
             
Sbjct: 166 QK 167

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 41.2 bits (98), Expect = 4e-04
 Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 18/65 (27%)

Query: 728 GWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKG 781
               L  AA  GR+  V +L++ GA        G             TP  LA+ NGH  
Sbjct: 14  LGKKLLEAARAGRDDEVRILMANGADVNAEDASG------------WTPLHLAAFNGHLE 61

Query: 782 ISGFL 786
           I   L
Sbjct: 62  IVEVL 66

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 60.5 bits (148), Expect = 5e-11
 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D+ G   L+LA + G+   ++  +  G  +N  D  G+T LH AA+ G  +   VLL  G
Sbjct: 44  DEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHG 103

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      D + +    +T  D++  NG++ ++  L
Sbjct: 104 A------DVNAQDKFGKTAFDISIGNGNEDLAEIL 132

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 52.8 bits (128), Expect = 2e-08
 Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 18/94 (19%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP---- 754
           L  AA  G D  ++  +  G  +N +D  G T L+ A   G  + V VLL  GA      
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVD 77

Query: 755 --GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
             G             TP  LA+  GH  I+  L
Sbjct: 78  AIG------------FTPLHLAAFIGHLEIAEVL 99

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 49.7 bits (120), Expect = 3e-07
 Identities = 17/58 (29%), Positives = 25/58 (43%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLS 749
           D  G   LHLAA +G+    +  +  G  +N +D  G TA   +   G E    +L  
Sbjct: 77  DAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 40.1 bits (95), Expect = 6e-04
 Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 18/65 (27%)

Query: 728 GWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKG 781
               L  AA  G++  V +L++ GA        G             TP  LA+++GH  
Sbjct: 14  LGKKLLEAARAGQDDEVRILMANGADVNAKDEYG------------LTPLYLATAHGHLE 61

Query: 782 ISGFL 786
           I   L
Sbjct: 62  IVEVL 66

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 62.4 bits (153), Expect = 7e-11
 Identities = 23/97 (23%), Positives = 33/97 (34%), Gaps = 18/97 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D+E    LH AA  G     +  + A   ++  ++ G + LH AA   R   V + LS  
Sbjct: 141 DNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRD 200

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGI 782
           +        G             TP   AS N     
Sbjct: 201 SDVTLKNKEG------------ETPLQCASLNSQVWS 225

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 61.3 bits (150), Expect = 2e-10
 Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 19/102 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
            ++ +  L  AA   +  A+K  + AG  ++ +D  G T LH AA  G  + V  LLS G
Sbjct: 41  SEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNG 100

Query: 752 AAP-------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                     G             TP   A+   H  +   L
Sbjct: 101 QMDVNCQDDGG------------WTPMIWATEYKHVDLVKLL 130

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 61.3 bits (150), Expect = 2e-10
 Identities = 24/101 (23%), Positives = 33/101 (32%), Gaps = 18/101 (17%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
               +  LH AA  G+       V AG +I+       T L  AA     + V  L+  G
Sbjct: 8   HQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAG 67

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A        G             T   LA+  GH  +  +L
Sbjct: 68  ALVDPKDAEG------------STCLHLAAKKGHYEVVQYL 96

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 59.7 bits (146), Expect = 6e-10
 Identities = 21/95 (22%), Positives = 32/95 (33%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           DD G   +  A    +   +K  ++ G  IN RD      LHWAA+ G      +LL+  
Sbjct: 108 DDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAK 167

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                  D         +P  +A+           
Sbjct: 168 C------DLHAVNIHGDSPLHIAARENRYDCVVLF 196

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 56.7 bits (138), Expect = 7e-09
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 19/102 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCGREKTVAVLLSL 750
           D EG   LHLAA  G+   ++  ++ G + +N +D  GWT + WA        V +LLS 
Sbjct: 74  DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK 133

Query: 751 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           G+                           A+ +G   I+  L
Sbjct: 134 GSDINIRDNEE------------NICLHWAAFSGCVDIAEIL 163

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 49.7 bits (120), Expect = 2e-06
 Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 8/65 (12%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVT----AGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
           +  G   LH+AA           V         +  ++  G T L  A+   +  +   +
Sbjct: 174 NIHGDSPLHIAARENR----YDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQM 229

Query: 748 LSLGA 752
                
Sbjct: 230 SKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 48.9 bits (118), Expect = 3e-06
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 6/68 (8%)

Query: 719 VSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNG 778
           ++      +  + LH AA  G      +L+  GA     ++        RTP   A+ N 
Sbjct: 2   MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSE------DQRTPLMEAAENN 55

Query: 779 HKGISGFL 786
           H     +L
Sbjct: 56  HLEAVKYL 63

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 60.5 bits (148), Expect = 9e-11
 Identities = 24/102 (23%), Positives = 35/102 (34%), Gaps = 19/102 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G  V+H AA  G+   ++  +     +N  D  G   LH AA  G  + V  L+   
Sbjct: 67  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126

Query: 752 AAP-------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A+        G             T  DLA   G   +   +
Sbjct: 127 ASNVGHRNHKG------------DTACDLARLYGRNEVVSLM 156

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 56.2 bits (137), Expect = 2e-09
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 7/95 (7%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           +  G+  L     LG     +  +  G + + +D +G+  +H AA  G   T+  LL   
Sbjct: 35  NGFGRTALQ-VMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQ 93

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A      D + E      P  LA+  GH  +  FL
Sbjct: 94  A------DVNIEDNEGNLPLHLAAKEGHLRVVEFL 122

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 54.3 bits (132), Expect = 1e-08
 Identities = 20/102 (19%), Positives = 31/102 (30%), Gaps = 19/102 (18%)

Query: 691 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL 750
           + +     L  AA+ G    +   +   V++N ++  G TAL      G  +    LL  
Sbjct: 1   MAEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLR 59

Query: 751 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           GA P      G                  A+  G       L
Sbjct: 60  GANPDLKDRTG------------FAVIHDAARAGFLDTLQTL 89

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 53.9 bits (131), Expect = 2e-08
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCGREKTVAVLLSL 750
           D+EG   LHLAA  G+   ++  V     ++  R+  G TA   A   GR + V+++ + 
Sbjct: 100 DNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159

Query: 751 GAA 753
           GA 
Sbjct: 160 GAG 162

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 63.7 bits (156), Expect = 9e-11
 Identities = 15/119 (12%), Positives = 37/119 (31%), Gaps = 11/119 (9%)

Query: 692 DDEGQGVLHLAASLGYDWAIK-----PTVTAGVSINFRDLSGWTALHWAAYCGREKTVAV 746
           D   +  L  A       A+          + + +++ +  G + LHWA     E     
Sbjct: 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMR 229

Query: 747 LLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSAD 805
            + +G    +  +          P  L+       ++  L + +   L+ +   ++   
Sbjct: 230 FVEMGIDVNMEDN------EHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTT 282

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 62.2 bits (152), Expect = 3e-10
 Identities = 28/118 (23%), Positives = 40/118 (33%), Gaps = 20/118 (16%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           DDE    +H+AA  G    ++  +  GVS   ++  G TALH A   G   T   L S+G
Sbjct: 17  DDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVG 76

Query: 752 AAP----GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL----AESSLTSLLLSLKMN 801
                  G            + P  LA       +   L     E       L  + +
Sbjct: 77  EVHSLWHG------------QKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECD 122

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 60.7 bits (148), Expect = 9e-10
 Identities = 16/97 (16%), Positives = 28/97 (28%), Gaps = 14/97 (14%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           +  G   LHLA   G     K   + G   +     G   +H A    +   V  L+   
Sbjct: 50  NRFGCTALHLACKFGCVDTAKYLASVGEVHSLWH--GQKPIHLAVMANKTDLVVALVEGA 107

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
              G            + P  L +    + ++   + 
Sbjct: 108 KERG------------QMPESLLNECDEREVNEIGSH 132

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 58.0 bits (141), Expect = 7e-09
 Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 14/97 (14%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE--KTVAVLLS 749
            + GQ    L                 +  + +   G TALHW    G E  + + +L+ 
Sbjct: 108 KERGQMPESLLNECDE------REVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQ 161

Query: 750 LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           LGA       P+ +     TP   A    ++     +
Sbjct: 162 LGA------SPTAKDKADETPLMRAMEFRNREALDLM 192

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 57.2 bits (139), Expect = 1e-08
 Identities = 6/70 (8%), Positives = 14/70 (20%)

Query: 683 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK 742
            +G             +  AA       ++        +     +G              
Sbjct: 278 HNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPA 337

Query: 743 TVAVLLSLGA 752
              + L+  A
Sbjct: 338 VKRMKLAPSA 347

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 54.5 bits (132), Expect = 8e-08
 Identities = 14/110 (12%), Positives = 30/110 (27%), Gaps = 29/110 (26%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
             +GQ  LH    LG ++     +      G S   +D +  T L  A      + + ++
Sbjct: 135 HCKGQTALHWCVGLGPEY--LEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLM 192

Query: 748 LSLGAAP-----------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           +    +            G             +    A     + ++   
Sbjct: 193 MDTVPSKSSLRLDYANKQG------------NSHLHWAILINWEDVAMRF 230

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 51.8 bits (125), Expect = 7e-07
 Identities = 18/91 (19%), Positives = 27/91 (29%), Gaps = 15/91 (16%)

Query: 717 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS 776
             ++    D      +H AA  G+   V  L+  G +P +            T   LA  
Sbjct: 9   PKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNR------FGCTALHLACK 62

Query: 777 NGHKGISGFLAESSLTSLLLSLKMNDSADDG 807
            G        A+      L S+    S   G
Sbjct: 63  FGCVDT----AK-----YLASVGEVHSLWHG 84

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 51.4 bits (124), Expect = 9e-07
 Identities = 9/108 (8%), Positives = 26/108 (24%), Gaps = 19/108 (17%)

Query: 692 DDEGQGVLHLAA------------SLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYC 738
           D+E    L+L+                  + I+      G ++    +     +  AA  
Sbjct: 241 DNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADP 300

Query: 739 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            +++ + +L           +           +          +    
Sbjct: 301 SKQEVLQLLQEKLD------EVVRSLNTGAGGAVKRKKKAAPAVKRMK 342

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 61.3 bits (150), Expect = 9e-11
 Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 15/108 (13%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G+  L  +   GY       +  G ++N R+L G T L  A+  GR + V  LL LG
Sbjct: 98  DFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELG 157

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLK 799
           A      D S       T    A   G + +     +     +   ++
Sbjct: 158 A------DISARDLTGLTAEASARIFGRQEV----IK-----IFTEVR 190

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 59.3 bits (145), Expect = 5e-10
 Identities = 19/103 (18%), Positives = 26/103 (25%), Gaps = 24/103 (23%)

Query: 690 ILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLS 749
            +D  G+ V  +                    N+RD    T L  A   G E  +  L+ 
Sbjct: 3   HMDKNGEIVEKIKDEKSI------NQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVE 56

Query: 750 LGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                      G             T    A  N   GI+  L
Sbjct: 57  NFDKLEDKDIEG------------STALIWAVKNNRLGIAEKL 87

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 57.8 bits (141), Expect = 1e-09
 Identities = 26/101 (25%), Positives = 35/101 (34%), Gaps = 18/101 (17%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D EG   L  A         +  ++ G ++N +D SG T L W+   G  +    LL  G
Sbjct: 65  DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHG 124

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A        G             TP  +AS  G   I   L
Sbjct: 125 ANVNDRNLEG------------ETPLIVASKYGRSEIVKKL 153

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 57.0 bits (139), Expect = 3e-09
 Identities = 27/101 (26%), Positives = 38/101 (37%), Gaps = 18/101 (17%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D   +  L +A  LG + AI   V     +  +D+ G TAL WA    R      LLS G
Sbjct: 32  DSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKG 91

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           +        G            +TP   +   G+  +S FL
Sbjct: 92  SNVNTKDFSG------------KTPLMWSIIFGYSEMSYFL 120

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 53.2 bits (129), Expect = 5e-08
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 8/66 (12%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
           + EG+  L +A+  G        V      G  I+ RDL+G TA   A   GR++ + + 
Sbjct: 131 NLEGETPLIVASKYGR----SEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIF 186

Query: 748 LSLGAA 753
             +  A
Sbjct: 187 TEVRRA 192

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 62.1 bits (152), Expect = 1e-10
 Identities = 26/95 (27%), Positives = 32/95 (33%), Gaps = 5/95 (5%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           DD     +  A   G     +  V AG  +   D    T LHWAA   R   V   +S G
Sbjct: 6   DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKG 65

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A    L       PL       A+  GH  +   L
Sbjct: 66  AIVDQLGGDLNSTPLH-----WATRQGHLSMVVQL 95

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 60.9 bits (149), Expect = 2e-10
 Identities = 27/126 (21%), Positives = 38/126 (30%), Gaps = 35/126 (27%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRD-LSGWTALHWAAYCGREKTVAV 746
           D  G   L  AA   +            T  VS+N  D     TALHWA   G    +++
Sbjct: 139 DQNGMTPLMWAAYRTHS---VDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISL 195

Query: 747 LLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKM 800
           LL  GA        G             +  DLA    +  +          + L   + 
Sbjct: 196 LLEAGANVDAQNIKG------------ESALDLAKQRKNVWM---------INHLQEARQ 234

Query: 801 NDSADD 806
               D+
Sbjct: 235 AKGYDN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 57.8 bits (141), Expect = 3e-09
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 6/96 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK-TVAVLLSL 750
           D EG   +HLAA  G+   +   +  G  ++  D +G T L WAAY         +LL+ 
Sbjct: 106 DGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF 165

Query: 751 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
             +  L            T    A   G+  +   L
Sbjct: 166 NVSVNLGDKYH-----KNTALHWAVLAGNTTVISLL 196

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 55.9 bits (136), Expect = 1e-08
 Identities = 22/93 (23%), Positives = 29/93 (31%), Gaps = 14/93 (15%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
            D     LH A   G+       V      G   +  D  G + +H AA  G    VA L
Sbjct: 73  GDLNSTPLHWATRQGH----LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYL 128

Query: 748 LSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHK 780
           ++ G       D         TP   A+   H 
Sbjct: 129 IAKGQ------DVDMMDQNGMTPLMWAAYRTHS 155

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 46.7 bits (112), Expect = 1e-05
 Identities = 9/66 (13%), Positives = 17/66 (25%), Gaps = 6/66 (9%)

Query: 721 INFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHK 780
           +   D      +  A   G  +    L+  G       D       + T    A+ N   
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGY------DVRQPDKENVTLLHWAAINNRI 55

Query: 781 GISGFL 786
            +  + 
Sbjct: 56  DLVKYY 61

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 63.4 bits (155), Expect = 1e-10
 Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 14/103 (13%)

Query: 692 DDEGQGVLHLAASLGY--------DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT 743
               + VLH  AS               K  + AG  +N  D    T L  A    R + 
Sbjct: 122 PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRL 181

Query: 744 VAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           VA L+  GA      DP+      R+    A++N   G+  ++
Sbjct: 182 VAYLMKAGA------DPTIYNKSERSALHQAAANRDFGMMVYM 218

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 62.7 bits (153), Expect = 2e-10
 Identities = 25/106 (23%), Positives = 36/106 (33%), Gaps = 27/106 (25%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV-----TAGVSINFRDLSGWTALHWAAYCGREKTVAV 746
             +G+  LH AA +       P V       G + + +D  G T +  AA  GR + V  
Sbjct: 276 KYKGRTALHYAAQVSN----MPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMY 331

Query: 747 LLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           L+  GA+                     T   LA +N H  I    
Sbjct: 332 LIQQGASVEAVDATD------------HTARQLAQANNHHNIVDIF 365

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 54.6 bits (132), Expect = 9e-08
 Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 16/107 (14%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV-------TAGVSINFRDLSGWTALHWAAYCGREKTV 744
           +   +  LH AA+          +            I   D +G TAL   A+      V
Sbjct: 196 NKSERSALHQAAANRD----FGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQV 251

Query: 745 AV---LLSLGAAPGLLTDPSPEFPLS--RTPSDLASSNGHKGISGFL 786
           A    L+  GA          +      RT    A+   +  I  +L
Sbjct: 252 ASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYL 298

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 53.8 bits (130), Expect = 2e-07
 Identities = 14/110 (12%), Positives = 19/110 (17%), Gaps = 18/110 (16%)

Query: 691 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL 750
           L              G D+      T        +      LH  A  G       +   
Sbjct: 57  LQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAA-GSYAITEPITRE 115

Query: 751 GAAP-----GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLL 795
                                 RT     +SN     S  L        +
Sbjct: 116 SVNIIDPRHN------------RTVLHWIASNSSAEKSEDLIVHEAKECI 153

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 53.4 bits (129), Expect = 2e-07
 Identities = 17/100 (17%), Positives = 28/100 (28%), Gaps = 21/100 (21%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLS-- 749
           D +    L LA        +   + AG      + S  +ALH AA       +  +L+  
Sbjct: 163 DCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNST 222

Query: 750 -LGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGI 782
            L          G             T   + + N  +  
Sbjct: 223 KLKGDIEELDRNG------------MTALMIVAHNEGRDQ 250

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 52.6 bits (127), Expect = 3e-07
 Identities = 13/61 (21%), Positives = 22/61 (36%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D++G+  + LAA  G    +   +  G S+   D +  TA   A        V +     
Sbjct: 310 DEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCR 369

Query: 752 A 752
            
Sbjct: 370 P 370

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 50.7 bits (122), Expect = 2e-06
 Identities = 23/113 (20%), Positives = 35/113 (30%), Gaps = 30/113 (26%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPT---VTAGVSINFR--------DLSGWTALHWAAYCGR 740
           D  G   L + A       +      V  G  +++            G TALH+AA    
Sbjct: 232 DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSN 291

Query: 741 EKTVAVLLS-LGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
              V  L+   G+        G            +TP  LA+  G   +  +L
Sbjct: 292 MPIVKYLVGEKGSNKDKQDEDG------------KTPIMLAAQEGRIEVVMYL 332

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 62.6 bits (153), Expect = 1e-10
 Identities = 17/89 (19%), Positives = 27/89 (30%), Gaps = 6/89 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
              G+  LHLA        ++  + AG     R   G T L  A          +L + G
Sbjct: 189 PTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHG 248

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHK 780
           A          +     +P   + S+   
Sbjct: 249 A------PEPEDGGDKLSPCSSSGSDSDS 271

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 59.9 bits (146), Expect = 9e-10
 Identities = 20/102 (19%), Positives = 30/102 (29%), Gaps = 8/102 (7%)

Query: 687 GPCILDDEGQGVLHLAASLGYDWAIKPT-VTAGVSINFRDLSGWTALHWAAYCGREKTVA 745
                 D       + +    +   +P      + +   +  G T LH A      + V 
Sbjct: 116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVR 175

Query: 746 VLLSLGAAPGLLTDP-SPEFPLSRTPSDLASSNGHKGISGFL 786
           +L   GA      D   PE    RTP  LA       +   L
Sbjct: 176 LLRDAGA------DLNKPEPTCGRTPLHLAVEAQAASVLELL 211

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 59.9 bits (146), Expect = 1e-09
 Identities = 25/103 (24%), Positives = 33/103 (32%), Gaps = 8/103 (7%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           +D GQ  LHLAA LG    ++    AG  +   +  G TALH A          VLL   
Sbjct: 42  NDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPR 101

Query: 752 AAPGL-LTDPSPEFPLSRTPSDL-------ASSNGHKGISGFL 786
            +     +D         TP          +  N         
Sbjct: 102 PSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRD 144

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 58.7 bits (143), Expect = 3e-09
 Identities = 34/169 (20%), Positives = 52/169 (30%), Gaps = 32/169 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAG---VSINFRDLSGWTALHWAAYCGREKTVAVLL 748
            ++G   LHLA    ++  +   +        ++ ++  G TALH AA  G   TV  L 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 749 SLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMND 802
           + GA        G             T   LA            A      +LL  + + 
Sbjct: 66  AAGAGVLVAERGG------------HTALHLACRVRAHTC----AC-----VLLQPRPSH 104

Query: 803 SAD--DGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNA 849
             D  D  L  S      T     A  +  N E++     +       A
Sbjct: 105 PRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA 153

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 57.9 bits (141), Expect = 4e-09
 Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 19/102 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLLSL 750
           + +G   LH+A        ++    AG  +N  +   G T LH A        + +LL  
Sbjct: 155 NYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA 214

Query: 751 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           GA P      G            RTP   A    +  ++  L
Sbjct: 215 GADPTARMYGG------------RTPLGSALLRPNPILARLL 244

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 49.1 bits (118), Expect = 3e-06
 Identities = 16/66 (24%), Positives = 21/66 (31%), Gaps = 3/66 (4%)

Query: 721 INFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHK 780
             +    G TALH A     E  +  LL   A    L   +      +T   LA+  G  
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDL---GQTALHLAAILGEA 58

Query: 781 GISGFL 786
                L
Sbjct: 59  STVEKL 64

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 42.5 bits (101), Expect = 5e-04
 Identities = 4/53 (7%), Positives = 8/53 (15%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTV 744
              G+  L  A         +     G           +    +         
Sbjct: 222 MYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNR 274

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 61.0 bits (148), Expect = 2e-10
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D + +  LH A S G+   ++  +  GV +N +D +GW+ LH AA  G ++ V  LL  G
Sbjct: 37  DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKG 96

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
           A        +       TP   A+S     I+  L E
Sbjct: 97  A------HVNAVNQNGCTPLHYAASKNRHEIAVMLLE 127

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 56.4 bits (136), Expect = 8e-09
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           DD G   LH+AAS G D  +K  +  G  +N  + +G T LH+AA   R +   +LL  G
Sbjct: 70  DDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 129

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
           A      +P  +     T    A++ G+  +   L  
Sbjct: 130 A------NPDAKDHYDATAMHRAAAKGNLKMVHILLF 160

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 54.9 bits (132), Expect = 3e-08
 Identities = 17/54 (31%), Positives = 21/54 (38%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 752
            +LA S   D   +  +         D    TALHWA   G  + V  LL LG 
Sbjct: 11  CNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGV 64

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 54.1 bits (130), Expect = 5e-08
 Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 6/110 (5%)

Query: 677 LLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA 736
           +++ +   G     ++  G   LH AAS          +  G + + +D    TA+H AA
Sbjct: 88  IVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAA 147

Query: 737 YCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
             G  K V +LL   A        + +     TP  LA        + FL
Sbjct: 148 AKGNLKMVHILLFYKA------STNIQDTEGNTPLHLACDEERVEEAKFL 191

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 49.1 bits (117), Expect = 2e-06
 Identities = 23/95 (24%), Positives = 34/95 (35%), Gaps = 8/95 (8%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D      +H AA+ G    +   +    S N +D  G T LH A    R +    L++ G
Sbjct: 136 DHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQG 195

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A          E    +TP  +A   G  G+    
Sbjct: 196 A------SIYIENKEEKTPLQVAK--GGLGLILKR 222

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 59.0 bits (144), Expect = 3e-10
 Identities = 14/84 (16%), Positives = 25/84 (29%), Gaps = 11/84 (13%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 758
           +H AA  G+   +     AG  ++ RD  G   +  A   G       L +         
Sbjct: 82  VHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR--- 138

Query: 759 DPSPEFPLSRTPSDLASSNGHKGI 782
                       + + ++ G   I
Sbjct: 139 --------GSNHARIDAAEGPSDI 154

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 57.9 bits (141), Expect = 7e-10
 Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
            +     L  AA+ G    ++  + AG + N  +  G   +      G  +   +LL  G
Sbjct: 9   MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVAELLLLHG 67

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A P      +   P+       A+  G       L
Sbjct: 68  AEPNCADPATLTRPVH-----DAAREGFLDTLVVL 97

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 57.5 bits (140), Expect = 1e-09
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWT-ALHWAAYCGREKTVAVLLSL 750
           +  G+  + +   +G     +  +  G   N  D +  T  +H AA  G   T+ VL   
Sbjct: 42  NSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA 100

Query: 751 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           GA   +           R P DLA   GH+ ++ +L
Sbjct: 101 GARLDVRDA------WGRLPVDLAEELGHRDVARYL 130

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 42.8 bits (102), Expect = 1e-04
 Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 717 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 754
           AG S+          L  AA  GR + V  LL  GA P
Sbjct: 5   AGSSME----PSADWLATAAARGRVEEVRALLEAGANP 38

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 60.5 bits (148), Expect = 3e-10
 Identities = 24/102 (23%), Positives = 36/102 (35%), Gaps = 19/102 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
            ++G   LHLA    +    +  +  G S+  +D      LH AA  G  K + +L  LG
Sbjct: 104 TNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG 163

Query: 752 AAP-------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            +        G             TP   A + GH   +  L
Sbjct: 164 KSAVNWQDKQG------------WTPLFHALAEGHGDAAVLL 193

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 59.8 bits (146), Expect = 5e-10
 Identities = 22/101 (21%), Positives = 32/101 (31%), Gaps = 16/101 (15%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV------TAGVSINFRDLSGWTALHWAAYCGREKTVA 745
           DD G    H+A S+G        V           +N     G T LH A      +   
Sbjct: 69  DDSGWTPFHIACSVGN----LEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124

Query: 746 VLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            L+  GA          +   ++ P   A+S G   +   L
Sbjct: 125 FLIENGA------SVRIKDKFNQIPLHRAASVGSLKLIELL 159

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 57.8 bits (141), Expect = 3e-09
 Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 4/89 (4%)

Query: 699 LHLAASLG-YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLL 757
           LH A     +    +   +    +  +D  G   LHW+      +  + LLS      L 
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 65

Query: 758 TDPSPEFPLSRTPSDLASSNGHKGISGFL 786
             P        TP  +A S G+  +   L
Sbjct: 66  DYPDDS---GWTPFHIACSVGNLEVVKSL 91

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 53.2 bits (129), Expect = 9e-08
 Identities = 24/106 (22%), Positives = 33/106 (31%), Gaps = 23/106 (21%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDL---SGWTALHWAAYCGREKTVAVLL 748
           D +G+  LH + S          ++   ++N  D    SGWT  H A   G  + V  L 
Sbjct: 33  DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLY 92

Query: 749 SLGAAP--------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                P        G             T   LA       +S FL
Sbjct: 93  DRPLKPDLNKITNQG------------VTCLHLAVGKKWFEVSQFL 126

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 49.8 bits (120), Expect = 1e-06
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVS-INFRDLSGWTALHWAAYCGREKTVAVLLSL 750
           D   Q  LH AAS+G    I+     G S +N++D  GWT L  A   G      +L+  
Sbjct: 137 DKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEK 196

Query: 751 GAA 753
             A
Sbjct: 197 YGA 199

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 59.0 bits (144), Expect = 3e-10
 Identities = 23/105 (21%), Positives = 35/105 (33%), Gaps = 27/105 (25%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVT----AGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
           D  G   +H AA  G+      T+      G  +N  D +G   +H A   G    V+ L
Sbjct: 65  DTSGTSPVHDAARTGF----LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120

Query: 748 LSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            +  +        G             TP +LA   G + +   L
Sbjct: 121 AA-ESDLHRRDARG------------LTPLELALQRGAQDLVDIL 152

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 57.4 bits (140), Expect = 8e-10
 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 7/97 (7%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           +  G+  L +    G        +  G S N +D SG + +H AA  G   T+ VL+  G
Sbjct: 33  NRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHG 91

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
           A      D +        P  LA   GH  +  FLA 
Sbjct: 92  A------DVNVPDGTGALPIHLAVQEGHTAVVSFLAA 122

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 55.5 bits (135), Expect = 4e-09
 Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 20/95 (21%)

Query: 699 LHLAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP--- 754
           L  AA+ G    ++  +    V  +  +  G TAL    + G       LL  GA+P   
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQ 64

Query: 755 ---GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
              G             +P   A+  G       L
Sbjct: 65  DTSG------------TSPVHDAARTGFLDTLKVL 87

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 51.3 bits (124), Expect = 1e-07
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 7/61 (11%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVT---AGVSINFRDLSGWTALHWAAYCGREKTVAVLL 748
           D  G   +HLA   G+       V+   A   ++ RD  G T L  A   G +  V +L 
Sbjct: 98  DGTGALPIHLAVQEGH----TAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

Query: 749 S 749
            
Sbjct: 154 G 154

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 60.2 bits (147), Expect = 3e-10
 Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 6/91 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
             E   +L  A         +        ++  D  G T L+ A +    +    L+  G
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG 62

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 782
           A      D + +  +S +P   A + G   I
Sbjct: 63  A------DINLQNSISDSPYLYAGAQGRTEI 87

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 58.2 bits (142), Expect = 1e-09
 Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 5/91 (5%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D EG   L++A         K  +  G  IN ++    +   +A   GR + +A +L   
Sbjct: 36  DTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHA 95

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 782
                  D +            A+  GH   
Sbjct: 96  TP-----DLNKHNRYGGNALIPAAEKGHIDN 121

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 51.7 bits (125), Expect = 2e-07
 Identities = 27/111 (24%), Positives = 38/111 (34%), Gaps = 32/111 (28%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAG-VSINFRDLSGWTALHWAAYC-----GRE 741
           +  G   L  AA  G+       V      G   I+F++  G+TAL  A          +
Sbjct: 103 NRYGGNALIPAAEKGH----IDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQ 158

Query: 742 KTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
             V +L+  GA        G            RT  D A+  G+  IS  L
Sbjct: 159 DIVKLLMENGADQSIKDNSG------------RTAMDYANQKGYTEISKIL 197

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 51.3 bits (124), Expect = 2e-07
 Identities = 14/67 (20%), Positives = 20/67 (29%), Gaps = 9/67 (13%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV-----TAGVSINFRDLSGWTALHWAAYCGREKTVAV 746
           +         A + G        +      A   +N  +  G  AL  AA  G    V +
Sbjct: 69  NSISDSPYLYAGAQGR----TEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKL 124

Query: 747 LLSLGAA 753
           LL  G  
Sbjct: 125 LLEDGRE 131

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 47.4 bits (114), Expect = 5e-06
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 5/63 (7%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVT-----AGVSINFRDLSGWTALHWAAYCGREKTVAV 746
           +D G   L  A  L     +   +       G   + +D SG TA+ +A   G  +   +
Sbjct: 137 NDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKI 196

Query: 747 LLS 749
           L  
Sbjct: 197 LAQ 199

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 42.8 bits (102), Expect = 2e-04
 Identities = 11/69 (15%), Positives = 17/69 (24%), Gaps = 18/69 (26%)

Query: 724 RDLSGWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSN 777
           +       L  A     +K   +L             G             TP ++A  N
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEG------------NTPLNIAVHN 49

Query: 778 GHKGISGFL 786
               I+  L
Sbjct: 50  NDIEIAKAL 58

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 60.4 bits (147), Expect = 3e-10
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 7/99 (7%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           ++EG   LH A        +   +TAG ++N  D  GWT LH AA C        L+  G
Sbjct: 51  NEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHG 110

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASS--NGHKGISGFLAE 788
           AA    T          T  +       G+   + +LA+
Sbjct: 111 AAIFATTLSD-----GATAFEKCDPYREGYADCATYLAD 144

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 56.5 bits (137), Expect = 8e-09
 Identities = 21/92 (22%), Positives = 31/92 (33%), Gaps = 6/92 (6%)

Query: 695 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 754
              +L  AA  G    ++  V      +  +  G TALH A        V  L++ GA  
Sbjct: 21  PLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGA-- 78

Query: 755 GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
               + +       TP   A+S     I   L
Sbjct: 79  ----NVNSPDSHGWTPLHCAASCNDTVICMAL 106

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 44.6 bits (106), Expect = 6e-05
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 2/63 (3%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           +      L   ++  +   +       V++  RD    T   WAA  G+E  V      G
Sbjct: 153 NSGAVYALWDYSA-EFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY-FG 210

Query: 752 AAP 754
             P
Sbjct: 211 LFP 213

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 41.9 bits (99), Expect = 5e-04
 Identities = 14/94 (14%), Positives = 24/94 (25%), Gaps = 11/94 (11%)

Query: 692 DDEGQGVLHLAASL--GYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLS 749
             +G            GY            S+   +     AL   +    E    +   
Sbjct: 118 LSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYS---AEFGDELSFR 174

Query: 750 LGAAPGLLT-DPSPEFPLSRTPSDLASSNGHKGI 782
            G +  +L  D         T    A+ +G +G 
Sbjct: 175 EGESVTVLRRDGP-----EETDWWWAALHGQEGY 203

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 57.4 bits (140), Expect = 4e-10
 Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 18/101 (17%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
             +G   LH AA  G+   +K  ++ G  +N R   G T LH AA  G  + V +LL+ G
Sbjct: 6   SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A        G             TP  LA  NGH  I   L
Sbjct: 66  ADVNARSKDG------------NTPEHLAKKNGHHEIVKLL 94

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 52.8 bits (128), Expect = 2e-08
 Identities = 20/61 (32%), Positives = 28/61 (45%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
             +G   LHLAA  G+   +K  +  G  +N R   G T  H A   G  + V +L + G
Sbjct: 39  SKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKG 98

Query: 752 A 752
           A
Sbjct: 99  A 99

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 45.8 bits (110), Expect = 5e-06
 Identities = 25/75 (33%), Positives = 28/75 (37%), Gaps = 20/75 (26%)

Query: 718 GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPS 771
           G     +D  G T LH AA  G  + V  LLS GA        G             TP 
Sbjct: 1   GHMWGSKD--GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDG------------NTPL 46

Query: 772 DLASSNGHKGISGFL 786
            LA+ NGH  I   L
Sbjct: 47  HLAAKNGHAEIVKLL 61

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.6 bits (151), Expect = 7e-10
 Identities = 81/619 (13%), Positives = 174/619 (28%), Gaps = 186/619 (30%)

Query: 569  LACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERIL-SMRSSPQNHLSEGLCEK 627
              C +V+  D     +   +I  I  S  + S       R+  ++ S  +  + + + E 
Sbjct: 33   FDCKDVQ--DMPKSILSKEEIDHIIMSKDAVS----GTLRLFWTLLSKQEEMVQKFVEEV 86

Query: 628  QK-----LISKI----IQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLL 678
             +     L+S I     Q       Y + + +   N +Q   KY + +     KL   LL
Sbjct: 87   LRINYKFLMSPIKTEQRQPSMMTRMY-IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALL 145

Query: 679  R-----KVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALH 733
                   V  DG         G+    +A  +   + ++  +   +              
Sbjct: 146  ELRPAKNVLIDGVLGS-----GKTW--VALDVCLSYKVQCKMDFKI-------------F 185

Query: 734  WA--AYCGREKTV-AVLLSL--GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
            W     C   +TV  +L  L     P   +       +      + +      +   L  
Sbjct: 186  WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE-----LRRLLKS 240

Query: 789  SSLTSLLLSLKMNDSADDGALEDS-IAKA--------VQT--------VSEKTATPANDN 831
                + LL L       +  ++++    A        + T        +S  T T  + +
Sbjct: 241  KPYENCLLVL------LN--VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD 292

Query: 832  DESDVLSLKDSLTAICNAT---------QA-----------ADRIHQ-IFRMQSFQRKQL 870
              S  L+  +  + +             +            A+ I   +    +++    
Sbjct: 293  HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC 352

Query: 871  TEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRG------------WKK 918
             +    +  S            L P +   +    ++     F              W  
Sbjct: 353  DKLTTIIESSLNV---------LEPAEYRKMFDRLSV-----FPPSAHIPTILLSLIWFD 398

Query: 919  RKEF-------------LLIRQ------RIVKIQAHVRGHQARKKYRPIIWSVGILEKVI 959
              +              L+ +Q       I  I   ++     +           L + I
Sbjct: 399  VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA---------LHRSI 449

Query: 960  LRWRRKGSGLRGFRRDALGMNPNPQ--------HMPLKED------------DYDFLKDG 999
            +         + F  D L      Q        H+   E             D+ FL+  
Sbjct: 450  VDHYNI---PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE-- 504

Query: 1000 RK-QTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKES---NMVPNGLEDIAD 1055
            +K + +     A G + + +Q  +    Y+  +   +   E   +   + +P   E++  
Sbjct: 505  QKIRHDSTAWNASGSILNTLQQLK---FYKPYICDNDPKYERLVNAILDFLPKIEENLIC 561

Query: 1056 GD-LDLIDIDSLLDDDTFM 1073
                DL+ I +L+ +D  +
Sbjct: 562  SKYTDLLRI-ALMAEDEAI 579

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 58.7 bits (141), Expect = 1e-08
 Identities = 110/728 (15%), Positives = 214/728 (29%), Gaps = 261/728 (35%)

Query: 175 ITDSTSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLS--Y 232
           + D         LS E+ D    ++D+   + R  L++ L         + ++  L   Y
Sbjct: 38  VQDMPKSI----LSKEEIDHIIMSKDAVSGTLR--LFWTLLSKQEEMVQKFVEEVLRINY 91

Query: 233 SYFLSPSSVRSSIPGD----YVSHAGHIPNDNQ----------DLMIECQKAL-GLASWE 277
            + +SP       P      Y+     + NDNQ             ++ ++AL  L   +
Sbjct: 92  KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK 151

Query: 278 EVLEH----CSGENDNVPPHAK--LESNVQK----ENIFDGEL----LSREASEENSGSS 323
            VL        G         K  +  +V      +   D ++    L    S E   + 
Sbjct: 152 NVLIDGVLGS-G---------KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPE---TV 198

Query: 324 LPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFL 383
           L +       +  N +       ++   +         L + + ++ CLL         L
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL--------VL 250

Query: 384 DQQNELPVQNNLQMQQRDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVD 443
                            +V        N++         N +F++  K+L        + 
Sbjct: 251 L----------------NV-------QNAK-------AWN-AFNLSCKIL--------L- 270

Query: 444 SFSRWMSKELEEVDNLHVQSSGIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTY 503
                                     T     V D   LS + +     S+   S   T 
Sbjct: 271 --------------------------TTRFKQVTD--FLSAATTTH--ISLDHHS--MTL 298

Query: 504 TDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYI 563
           T  E++     + LK       C+        ++P EV           P          
Sbjct: 299 TPDEVK----SLLLK----YLDCRPQ------DLPREV-------LTTNP---------- 327

Query: 564 TCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEG 623
                   S       I+       I D  G +T +++ H+  +++ ++  S  N L   
Sbjct: 328 -----RRLS-------IIA----ESIRD--GLATWDNWKHVNCDKLTTIIESSLNVLEPA 369

Query: 624 LCEKQKL-----I----SKI---------IQLKEEEE--------SYQMVEANPEKN--- 654
             E +K+     +    + I           + + +          Y +VE  P+++   
Sbjct: 370 --EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS 427

Query: 655 -------LSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGY 707
                  L   +E    L + + +  Y+ + +    D   P  LD       +  + +G+
Sbjct: 428 IPSIYLELKVKLENEYALHRSIVDH-YN-IPKTFDSDDLIPPYLDQ------YFYSHIGH 479

Query: 708 DWAIKPTVTAGVSINFRDLSGWTALHW---------AAYCGREKTVAVLLSLGAAPGLLT 758
              +K          FR +  +    +          A+      +  L  L      + 
Sbjct: 480 H--LKNIEHPERMTLFRMV--FLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC 535

Query: 759 DPSPEFPLSRTPSDLASSNGHKGISGFL--AESSL-----TSLL-LSLKMNDSADDGALE 810
           D  P++   R  + +           FL   E +L     T LL ++L M +  D+   E
Sbjct: 536 DNDPKY--ERLVNAILD---------FLPKIEENLICSKYTDLLRIAL-MAE--DEAIFE 581

Query: 811 DSIAKAVQ 818
           ++  K VQ
Sbjct: 582 EA-HKQVQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.0 bits (134), Expect = 7e-08
 Identities = 76/582 (13%), Positives = 172/582 (29%), Gaps = 192/582 (32%)

Query: 38  NYQKF---HIASEPPSRPPSGSLFLFDRKVLRYFR-----KDGHNWRKKKDGKTVREAHE 89
           NY KF    I +E   R PS    ++  +  R +         +  R +     +R+A  
Sbjct: 90  NY-KFLMSPIKTEQ--RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY-LKLRQALL 145

Query: 90  KLKVGSVDVLH--------CYYAHGEDNENFQRR----CYWM-----------LE--QDL 124
           +L+     ++                 +   Q +     +W+           LE  Q L
Sbjct: 146 ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205

Query: 125 MHIVFVHYLEVQGNKSN-------VGDRESNEVTSNPGKHSSL------------TFSFP 165
           ++ +  ++     + SN       +       + S P ++  L             F+  
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL- 264

Query: 166 GNR---TKAPSGITDSTSPTSTLTLSCEDADSGYDAEDSHQASSRA--HLYYELP-QMGN 219
             +   T     +TD  S  +T  +S +        ++      +       +LP ++  
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 220 G-PRM-----EKMDSGLS-YSYFLSPSSVRSSIPGDYVSHAGHIPNDNQDLMIE-CQKAL 271
             PR      E +  GL+ +  +                   H+  D    +IE     L
Sbjct: 325 TNPRRLSIIAESIRDGLATWDNWK------------------HVNCDKLTTIIESSLNVL 366

Query: 272 GLASWEEVLEHCS--GENDNVPPHAKLESNVQKENIFDGELLSREASE---ENSGSSLPV 326
             A + ++ +  S    + ++P    L        +   +++  +      +    SL  
Sbjct: 367 EPAEYRKMFDRLSVFPPSAHIPTIL-LS-------LIWFDVIKSDVMVVVNKLHKYSL-- 416

Query: 327 QFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQ 386
                  +         SI  +  +L                                  
Sbjct: 417 -------VEKQPKESTISIPSIYLEL---------------------------------- 435

Query: 387 NELPVQNNLQMQQRDVESHSQTK---SNSESEIHGEGTINFSFSVKQKL---LNGEGNLE 440
            ++ ++N   + +  V+ ++  K   S+     + +    +S      +   L    + E
Sbjct: 436 -KVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYF-YSH-----IGHHLKNIEHPE 488

Query: 441 KVDSFS------RWMSKELEEVDNLHVQSSGIEWSTEECGNVVDDSSLSPSLSQDQLFS- 493
           ++  F       R++ +++              W+           S+  +L Q + +  
Sbjct: 489 RMTLFRMVFLDFRFLEQKIR--------HDSTAWNAS--------GSILNTLQQLKFYKP 532

Query: 494 -IIDFSPKWTYTDPEIEVVVTGM--FLKSHQE-VAKCKWSCM 531
            I D        DP+ E +V  +  FL   +E +   K++ +
Sbjct: 533 YICD-------NDPKYERLVNAILDFLPKIEENLICSKYTDL 567

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 55.8 bits (136), Expect = 7e-10
 Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 18/90 (20%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP---- 754
           LHLAA  G+   +K  + AG  +N +D +G T LH AA  G  + V +LL  GA      
Sbjct: 6   LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65

Query: 755 --GLLTDPSPEFPLSRTPSDLASSNGHKGI 782
             G            RTP  LA+ NGH  +
Sbjct: 66  KNG------------RTPLHLAARNGHLEV 83

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 53.1 bits (129), Expect = 7e-09
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G+  LHLAA  G+   +K  + AG  +N +D +G T LH AA  G  + V +LL  G
Sbjct: 32  DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91

Query: 752 A 752
           A
Sbjct: 92  A 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 45.4 bits (109), Expect = 4e-06
 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 18/62 (29%)

Query: 727 SGWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHK 780
           +G T LH AA  G  + V +LL  GA        G            RTP  LA+ NGH 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG------------RTPLHLAARNGHL 48

Query: 781 GI 782
            +
Sbjct: 49  EV 50

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 57.0 bits (139), Expect = 7e-10
 Identities = 34/101 (33%), Positives = 43/101 (42%), Gaps = 26/101 (25%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
           D  G+  LHLAA  G+       V     AG  +N +D +G T LH AA  G  + V +L
Sbjct: 32  DKNGRTPLHLAARNGH----LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 87

Query: 748 LSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGI 782
           L  GA        G            RTP  LA+ NGH  +
Sbjct: 88  LEAGADVNAKDKNG------------RTPLHLAARNGHLEV 116

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 56.6 bits (138), Expect = 1e-09
 Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 18/94 (19%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP---- 754
           LHLAA  G+   +K  + AG  +N +D +G T LH AA  G  + V +LL  GA      
Sbjct: 6   LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65

Query: 755 --GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
             G            RTP  LA+ NGH  +   L
Sbjct: 66  KNG------------RTPLHLAARNGHLEVVKLL 87

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 54.3 bits (132), Expect = 5e-09
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G+  LHLAA  G+   +K  + AG  +N +D +G T LH AA  G  + V +LL  G
Sbjct: 65  DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124

Query: 752 A 752
           A
Sbjct: 125 A 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 45.4 bits (109), Expect = 8e-06
 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 18/62 (29%)

Query: 727 SGWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHK 780
           +G T LH AA  G  + V +LL  GA        G            RTP  LA+ NGH 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG------------RTPLHLAARNGHL 48

Query: 781 GI 782
            +
Sbjct: 49  EV 50

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 56.7 bits (138), Expect = 1e-09
 Identities = 18/95 (18%), Positives = 29/95 (30%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
                  L  AA+ G    ++  + AG   N  +  G   +      G  +   +LL  G
Sbjct: 9   GGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHG 67

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A P      +   P+       A+  G       L
Sbjct: 68  AEPNCADPATLTRPVH-----DAAREGFLDTLVVL 97

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 55.1 bits (134), Expect = 4e-09
 Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 8/96 (8%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWT-ALHWAAYCGREKTVAVLLSL 750
           +  G+  + +    G     +  +  G   N  D +  T  +H AA  G   T+ VL   
Sbjct: 42  NRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA 100

Query: 751 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           GA   +           R P DLA   GH+ I+ +L
Sbjct: 101 GARLDVCDA------WGRLPVDLAEEQGHRDIARYL 130

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 54.0 bits (131), Expect = 1e-08
 Identities = 11/54 (20%), Positives = 18/54 (33%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 752
           +H AA  G+   +     AG  ++  D  G   +  A   G       L +   
Sbjct: 82  VHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 50.9 bits (123), Expect = 1e-07
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 717 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 752
               I+    S    L  AA  G+ +TV  LL  GA
Sbjct: 1   GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGA 36

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 59.1 bits (144), Expect = 2e-09
 Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 17/94 (18%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP---- 754
           LH AA+L     +K  + +G+  +  D  G TAL++A   G  +TV + +          
Sbjct: 66  LHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYG 125

Query: 755 --GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
             G            +T    A       I  + 
Sbjct: 126 KTGW-----------KTSFYHAVMLNDVSIVSYF 148

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 57.9 bits (141), Expect = 4e-09
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 8/96 (8%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGW-TALHWAAYCGREKTVAVLLSL 750
           DD+G   L+ A   G    +K  V     + F   +GW T+ + A        V+  LS 
Sbjct: 92  DDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE 151

Query: 751 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
             +   L           +   +   NGH  +   L
Sbjct: 152 IPSTFDLAI-------LLSCIHITIKNGHVDMMILL 180

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 57.2 bits (139), Expect = 7e-09
 Identities = 19/101 (18%), Positives = 27/101 (26%), Gaps = 20/101 (19%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G    + A +      +   + AG   N  +      LH AA     K V +LL  G
Sbjct: 28  DVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSG 85

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                    G             T    A  +G+       
Sbjct: 86  LDDSQFDDKG------------NTALYYAVDSGNMQTVKLF 114

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 54.5 bits (132), Expect = 5e-08
 Identities = 7/96 (7%), Positives = 22/96 (22%), Gaps = 14/96 (14%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWT-ALHWAAYCGREKTVAVLLSL 750
                  +H+    G+   +   +    S N  +   +   +  A      + +  L   
Sbjct: 158 LAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKY 217

Query: 751 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                   +         + +          I+  +
Sbjct: 218 DI------NIY-------SANLENVLLDDAEIAKMI 240

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 54.5 bits (132), Expect = 6e-08
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 8/70 (11%)

Query: 717 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS 776
           +       D+ G +A ++A      + V  LL+ GA   LL +          P   A++
Sbjct: 20  SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLEN--------EFPLHQAAT 71

Query: 777 NGHKGISGFL 786
                I   L
Sbjct: 72  LEDTKIVKIL 81

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 51.4 bits (124), Expect = 5e-07
 Identities = 13/89 (14%), Positives = 23/89 (25%), Gaps = 8/89 (8%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 758
            + A  L     +   ++      F      + +H     G    + +LL    +     
Sbjct: 133 FYHAVMLNDVSIVSYFLSEI-PSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNN 191

Query: 759 DPSPEFPLSRTPS-DLASSNGHKGISGFL 786
                  L   P   LA  N    +   L
Sbjct: 192 S------LLFIPDIKLAIDNKDIEMLQAL 214

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 57.0 bits (139), Expect = 2e-09
 Identities = 21/105 (20%), Positives = 30/105 (28%), Gaps = 26/105 (24%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 747
           +      LH AA           V      G  ++ +D  G   LH A   G  +   +L
Sbjct: 39  EGRQSTPLHFAAGYNR----VSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELL 94

Query: 748 LSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           +  GA                      TP   A++ G   I   L
Sbjct: 95  VKHGAVVNVADLWK------------FTPLHEAAAKGKYEICKLL 127

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 57.0 bits (139), Expect = 2e-09
 Identities = 31/101 (30%), Positives = 39/101 (38%), Gaps = 19/101 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G   LH A S G+    +  V  G  +N  DL  +T LH AA  G+ +   +LL  G
Sbjct: 72  DKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHG 131

Query: 752 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A P      G             TP DL   +G   I   L
Sbjct: 132 ADPTKKNRDG------------NTPLDLV-KDGDTDIQDLL 159

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 55.5 bits (135), Expect = 5e-09
 Identities = 26/106 (24%), Positives = 32/106 (30%), Gaps = 27/106 (25%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV-----TAGVSINFRDLSGWTALHWAAYCGREKTVAV 746
           + E    L  AA  G       TV        V+    +    T LH+AA   R   V  
Sbjct: 5   NSEADRQLLEAAKAGD----VETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEY 60

Query: 747 LLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           LL  GA        G              P   A S GH  ++  L
Sbjct: 61  LLQHGADVHAKDKGG------------LVPLHNACSYGHYEVAELL 94

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 60.9 bits (148), Expect = 2e-09
 Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 16/143 (11%)

Query: 903  HSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPI--IWSVGILEKVIL 960
             +A I+IQK  RGW  RK+++ +R+  + IQ +VRGHQAR     +    +  I++K   
Sbjct: 768  RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQR 827

Query: 961  RWR-RK------------GSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERL 1007
             +  RK             + LRG+           +H  +    +      R      L
Sbjct: 828  MYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTL 887

Query: 1008 QKALGRVKSMVQYPEARAQYRRL 1030
            +  +  ++   +   A+ + ++L
Sbjct: 888  KAIV-YLQCCYRRMMAKRELKKL 909

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 50.5 bits (121), Expect = 3e-06
 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 5/97 (5%)

Query: 850 TQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQI 909
           T+AA  I +  RM    RK+       +  +     +L+    +R      L    +I I
Sbjct: 816 TRAAIIIQKFQRMY-VVRKRY----QCMRDATIALQALLRGYLVRNKYQMMLREHKSIII 870

Query: 910 QKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYR 946
           QK  RGW  R  +    + IV +Q   R   A+++ +
Sbjct: 871 QKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELK 907

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 8/68 (11%), Positives = 21/68 (30%), Gaps = 7/68 (10%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPT-------VTAGVSINFRDLSGWTALHWAAYCGREKTV 744
               + V+       +    +           +G+ +  +D  G TAL +   C +   +
Sbjct: 111 YKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIAL 170

Query: 745 AVLLSLGA 752
            ++     
Sbjct: 171 KMMEDYIK 178

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 8/110 (7%), Positives = 17/110 (15%), Gaps = 19/110 (17%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTA------GVSINFRDLSGWTALHWAAYCGREKTV- 744
             EG  +       G +     T         G  I          +    +        
Sbjct: 72  TKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENE 131

Query: 745 ------AVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
                  +    G           +     T  +             + +
Sbjct: 132 MIPLYKLIFSQSGL------QLLIKDKWGLTALEFVKRCQKPIALKMMED 175

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 17/116 (14%), Positives = 24/116 (20%), Gaps = 19/116 (16%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVT----AGVSINFRDLSGWTALHWAAYCGREKTVA-- 745
                 +L+       D A           G  I  R   G T        G        
Sbjct: 35  SVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTT 94

Query: 746 ----VLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLS 797
               + L  GA    L          +        N     +  +    L  L+ S
Sbjct: 95  ELCKIFLEKGADITALYK------PYKIVVFKNIFNYFVDENEMIP---LYKLIFS 141

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 40.8 bits (96), Expect = 9e-04
 Identities = 10/61 (16%), Positives = 18/61 (29%), Gaps = 3/61 (4%)

Query: 726 LSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGF 785
           +S +  +  AA  G  +    L   G       +   +  +        +      IS F
Sbjct: 4   MSEYRTVSAAAMLGTYEDFLELFEKGYE---DKESVLKSNILYDVLRNNNDEARYKISMF 60

Query: 786 L 786
           L
Sbjct: 61  L 61

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 58.9 bits (142), Expect = 3e-09
 Identities = 25/166 (15%), Positives = 45/166 (27%), Gaps = 21/166 (12%)

Query: 691 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY---CGREKTVAVL 747
           +D+ G   LH   S+     +K  V  G +  + D  G + L  A          T   L
Sbjct: 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEAL 186

Query: 748 LSLGAAPGLLTDPSPEFPLSRTP----SDLASSNGHKGISGFLAESSLTSLLLSLKMNDS 803
           L       +L D       +RT        +   G    + +  +  +  +         
Sbjct: 187 LDYLYPCLILEDSM-----NRTILHHIIITSGMTGCSAAAKYYLDILMGWI--------- 232

Query: 804 ADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNA 849
                         +            +   + L LK  +  + NA
Sbjct: 233 VKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNA 278

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 55.0 bits (132), Expect = 6e-08
 Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 4/80 (5%)

Query: 677 LLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTAL 732
           L+  + +    P       +       +     +I   +         +N +D +G T L
Sbjct: 228 LMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCL 287

Query: 733 HWAAYCGREKTVAVLLSLGA 752
           + AA  G    V  LL  GA
Sbjct: 288 NIAARLGNISIVDALLDYGA 307

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 49.3 bits (117), Expect = 3e-06
 Identities = 17/105 (16%), Positives = 34/105 (32%), Gaps = 5/105 (4%)

Query: 649 ANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYD 708
            + E+ +       ++L   ++E   S        + +G        Q   H++      
Sbjct: 55  NDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEG----GSSNQQQQHVSFDSLLQ 110

Query: 709 WAIKPTVTAGVSINF-RDLSGWTALHWAAYCGREKTVAVLLSLGA 752
                     +++N   D  G T LHW       + V  L+  G+
Sbjct: 111 EVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGS 155

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 44.6 bits (105), Expect = 1e-04
 Identities = 11/45 (24%), Positives = 18/45 (40%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA 736
           D  G   L++AA LG    +   +  G      + SG   + + A
Sbjct: 280 DSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 324

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 57.6 bits (140), Expect = 3e-09
 Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 4/105 (3%)

Query: 686 KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVA 745
             P  L   G+  L  AA +G +  ++  +  G  I  +D  G T LH       +    
Sbjct: 112 YRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFAC 171

Query: 746 ----VLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
               +LLS      L +          TP  LA   G+  +   L
Sbjct: 172 QMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHL 216

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 55.7 bits (135), Expect = 1e-08
 Identities = 28/126 (22%), Positives = 43/126 (34%), Gaps = 24/126 (19%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD-------------LSGWTALHWAAYC 738
             EGQ  LH+A        ++  +  G S++ R                G   L +AA  
Sbjct: 72  LYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACV 131

Query: 739 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSL 798
           G E+ V +L+  GA      D   +  L  T   +     +K  +  +       LLLS 
Sbjct: 132 GSEEIVRLLIEHGA------DIRAQDSLGNTVLHILILQPNKTFACQMYN-----LLLSY 180

Query: 799 KMNDSA 804
              D  
Sbjct: 181 DGGDHL 186

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 24/107 (22%), Positives = 31/107 (28%), Gaps = 12/107 (11%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSI-----NFRDLSGWTALHWAAYCGREKTVAV 746
              G+  LH+AA      A    + A   +           G TALH A        V  
Sbjct: 34  GAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRA 93

Query: 747 LLSLGA-------APGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           LL+ GA              P         P   A+  G + I   L
Sbjct: 94  LLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLL 140

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 53.8 bits (130), Expect = 6e-08
 Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 20/98 (20%)

Query: 699 LHLAASLGYDWAIKPTVT-----AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAA 753
           L LAA           ++      G  ++ R   G TALH AA     +   VL+     
Sbjct: 7   LLLAAKEND----VQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAP- 61

Query: 754 PGLLTDPSPEFPLS-----RTPSDLASSNGHKGISGFL 786
                +   E   S     +T   +A  N +  +   L
Sbjct: 62  -----ELVFEPMTSELYEGQTALHIAVINQNVNLVRAL 94

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 47.6 bits (114), Expect = 6e-06
 Identities = 10/71 (14%), Positives = 15/71 (21%), Gaps = 10/71 (14%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSIN------FRDLSGWTALHWAAYCGRE 741
           D  G  VLH+                  +     +        +  G T    A   G  
Sbjct: 151 DSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNI 210

Query: 742 KTVAVLLSLGA 752
                L+    
Sbjct: 211 VMFQHLMQKRK 221

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837

 Score = 60.0 bits (146), Expect = 3e-09
 Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 903 HSAAIQIQKKFRGWKKRKEFLLIRQR---IVKIQAHVRGHQARKKYR 946
                  Q   RG+  RK +  ++ +   +  IQ ++R     + ++
Sbjct: 779 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ 825

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 58.5 bits (142), Expect = 9e-09
 Identities = 20/147 (13%), Positives = 48/147 (32%), Gaps = 10/147 (6%)

Query: 907  IQIQKKFRGWKKRKEFLLIRQR---IVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWR 963
             +  +  +    ++  L  R     I  +Q+ +  H+  KK         +  ++   + 
Sbjct: 765  KRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVS-ELEAIYN 823

Query: 964  RKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTE------ERLQKALGRVKSM 1017
               + LR  +R+            +        K  ++  E      +R +K    ++  
Sbjct: 824  SLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKY 883

Query: 1018 VQYPEARAQYRRLLTVVEGSRETKESN 1044
             +  +    +    +V  GS ET +S 
Sbjct: 884  NRILKKLENWATTKSVYLGSNETGDSI 910

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 55.8 bits (134), Expect = 2e-08
 Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 18/117 (15%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPT---VTAGVSINFRDLSGWTALHWAAYCGREKTVAVLL 748
            +  +  LHLA       ++      V    +++ +   G TALH+       + + +LL
Sbjct: 166 HEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLL 225

Query: 749 SLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSAD 805
              A+  +            TP D+A    H+             LL          
Sbjct: 226 RGKASIEIAN------ESGETPLDIAKRLKHEHC---------EELLTQALSGRFNS 267

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 55.8 bits (134), Expect = 3e-08
 Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 18/114 (15%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPT---VTAGVSINFRDLSGWTALHWAAYCGREKTVAVLL 748
               + VLHLA  +    ++      +  G  ++ +   G TALH+AA   +   + +LL
Sbjct: 187 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLL 246

Query: 749 SLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMND 802
              A  G + +         T  D+A    HK             LL   +   
Sbjct: 247 KGRALVGTVNE------AGETALDIARKKHHKEC---------EELLEQAQAGT 285

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 57.2 bits (138), Expect = 3e-08
 Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 29/132 (21%)

Query: 903  HSAAIQIQKKFRGWKKRKEFLLIRQR---IVKIQAHVRGHQARKKYRPIIWSVGILEKVI 959
                I  Q + RG+  RK F   +Q+   I  IQ +VR       +      +      +
Sbjct: 792  TDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHWP--WMXLFFXIXPL 849

Query: 960  LRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQ 1019
            L+  R+   ++    +                         ++T+ER QKA   +K + Q
Sbjct: 850  LKVTRQEEEMQAKDEE------------------------LQRTKERQQKAEAELKELEQ 885

Query: 1020 YPEARAQYRRLL 1031
                  + + LL
Sbjct: 886  KHTQLCEEKNLL 897

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 52.5 bits (126), Expect = 3e-07
 Identities = 25/117 (21%), Positives = 32/117 (27%), Gaps = 22/117 (18%)

Query: 692 DDEGQGVLHLA---ASLGYDWAIKPTVTAG-----------VSINFRDLSGWTALHWAAY 737
            + G+  L  A      G +  I   +               S       G TALH A  
Sbjct: 51  PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIE 110

Query: 738 CGREKTVAVLLSLGA--------APGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
                 V +L+  GA             T   P F     P  LA+      I  FL
Sbjct: 111 RRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL 167

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 52.1 bits (125), Expect = 4e-07
 Identities = 15/105 (14%), Positives = 23/105 (21%), Gaps = 29/105 (27%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTA----------------GVSINFRDLSGWTALHWA 735
           D  G  VLH    +  +                                +  G T L  A
Sbjct: 181 DSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240

Query: 736 AYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHK 780
           A  G+   +A +L                         A+ + H 
Sbjct: 241 ASSGKIGVLAYILQREIH-------------EPECRHAAAHHHHH 272

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 50.9 bits (122), Expect = 7e-07
 Identities = 20/120 (16%), Positives = 31/120 (25%), Gaps = 17/120 (14%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD--------------LSGWTALHWAAY 737
             +GQ  LH+A        +   V  G  +                    G   L  AA 
Sbjct: 98  YYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAAC 157

Query: 738 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLS 797
             +   V  LL     P    D S    +  T            +      +S+ + +L 
Sbjct: 158 TNQLAIVKFLLQNSWQP---ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILI 214

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 46.3 bits (110), Expect = 2e-05
 Identities = 22/115 (19%), Positives = 34/115 (29%), Gaps = 13/115 (11%)

Query: 685 GKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVS---INFRDLSGWTALHWAAYCGRE 741
                     G+  L LAA       +K  +        I+ RD  G T LH        
Sbjct: 138 KTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADN 197

Query: 742 KTVAVLLSLGAAPGLLT-----DPSPEFPLS-----RTPSDLASSNGHKGISGFL 786
                         +L       P+ +          TP  LA+S+G  G+  ++
Sbjct: 198 TVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYI 252

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 51.7 bits (124), Expect = 3e-07
 Identities = 9/63 (14%), Positives = 16/63 (25%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           +      L +    G                  +  G T L  AA  G+ +    +L   
Sbjct: 185 NSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244

Query: 752 AAP 754
            + 
Sbjct: 245 FSG 247

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 51.7 bits (124), Expect = 4e-07
 Identities = 23/135 (17%), Positives = 34/135 (25%), Gaps = 25/135 (18%)

Query: 677 LLRKVCEDGKGPCIL----DDEGQGVLHLAASLGYD--------------WAIKPTVTAG 718
           LL  +  + K            G+  L  A     D               +  P     
Sbjct: 21  LLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80

Query: 719 VSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA-----APGLLTDPSPEFPLS--RTPS 771
                    G +ALH A      + V +L+  GA     A G                P 
Sbjct: 81  AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPL 140

Query: 772 DLASSNGHKGISGFL 786
            LA+      +  +L
Sbjct: 141 SLAACTKQWDVVTYL 155

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 49.8 bits (119), Expect = 2e-06
 Identities = 16/76 (21%), Positives = 22/76 (28%), Gaps = 13/76 (17%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLS-------------GWTALHWAAYC 738
             +G   LH+A        +K  V  G  ++ R                G   L  AA  
Sbjct: 87  FYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACT 146

Query: 739 GREKTVAVLLSLGAAP 754
            +   V  LL     P
Sbjct: 147 KQWDVVTYLLENPHQP 162

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 48.2 bits (115), Expect = 5e-06
 Identities = 19/113 (16%), Positives = 29/113 (25%), Gaps = 32/113 (28%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D  G  VLH                    +   +    +AL    Y G  +  A L    
Sbjct: 169 DSLGNTVLHALV-----------------MIADNSPENSALVIHMYDGLLQMGARLCPTV 211

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSA 804
               +            TP  LA+  G   I            +L  + + +A
Sbjct: 212 QLEEISNH------QGLTPLKLAAKEGKIEI---------FRHILQREFSGAA 249

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 52.7 bits (127), Expect = 6e-07
 Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 14/152 (9%)

Query: 903  HSAAIQIQKKFRGWKKRKEFLLIRQR---------IVKIQAHVRGHQARKKYRPIIWSVG 953
             S   +     R  +  +     +           I  +Q+ +  H+  KK         
Sbjct: 763  GSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQE 822

Query: 954  ILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGR 1013
            +  ++   +    + LR  +R+   + P        +  +  L+   ++  E L+  L R
Sbjct: 823  VS-ELEAIYNSLQTKLRLIKREPF-VAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKR 880

Query: 1014 VKSMVQYPEARAQYRRLLTVVEGSRETKESNM 1045
             K +        +Y R+L  +E    TK   +
Sbjct: 881  QKKIA---VLLQKYNRILKKLENWATTKSVYL 909

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 50.5 bits (121), Expect = 1e-06
 Identities = 23/117 (19%), Positives = 31/117 (26%), Gaps = 22/117 (18%)

Query: 692 DDEGQGVLHLAA---SLGYDWAIKPTVTAG-----------VSINFRDLSGWTALHWAAY 737
              G+  L  A    S G +  I   +                       G TALH A  
Sbjct: 43  PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIE 102

Query: 738 CGREKTVAVLLSLGA--------APGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
              +  V +L+  GA              D    F     P  LA+      I  +L
Sbjct: 103 RRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL 159

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 46.7 bits (111), Expect = 2e-05
 Identities = 14/77 (18%), Positives = 21/77 (27%), Gaps = 14/77 (18%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD--------------LSGWTALHWAAY 737
              GQ  LH+A        ++  V  G  ++ +                 G   L  AA 
Sbjct: 90  YYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAAC 149

Query: 738 CGREKTVAVLLSLGAAP 754
             +   V  L   G   
Sbjct: 150 TNQPHIVHYLTENGHKQ 166

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 45.9 bits (109), Expect = 3e-05
 Identities = 11/78 (14%), Positives = 21/78 (26%), Gaps = 16/78 (20%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPT---------VTAGVSIN-------FRDLSGWTALHWA 735
           D  G  VLH   ++  +               +     +          +  G + L  A
Sbjct: 173 DSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMA 232

Query: 736 AYCGREKTVAVLLSLGAA 753
           A  G+      ++    A
Sbjct: 233 AKTGKIGIFQHIIRREIA 250

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 45.2 bits (107), Expect = 6e-05
 Identities = 25/131 (19%), Positives = 39/131 (29%), Gaps = 34/131 (25%)

Query: 691 LDDEGQGVLHLAASLGYDWAIKPTV-------TAGVSINFRDLSGWTALHWAAYCGRE-- 741
               G+  L LAA           V            +  +D  G T LH          
Sbjct: 136 YFYFGELPLSLAACTNQ----PHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTR 191

Query: 742 -------KTVAVLLSLGAAPGLLTDPSPEFPLS---RTPSDLASSNGHKGISGFLAESSL 791
                  K   +LL   A   L  D + E  L+    +P  +A+  G  GI     +   
Sbjct: 192 ENTKFVTKMYDLLLIKCAK--LFPDTNLEALLNNDGLSPLMMAAKTGKIGI----FQ--- 242

Query: 792 TSLLLSLKMND 802
              ++  ++ D
Sbjct: 243 --HIIRREIAD 251

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 48.0 bits (114), Expect = 1e-05
 Identities = 31/231 (13%), Positives = 62/231 (26%), Gaps = 44/231 (19%)

Query: 585 KDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESY 644
            D  +  I        F H      LS+ +                +     +++  +  
Sbjct: 14  NDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIH------IFLPGTKNMEQVRQLL 67

Query: 645 QMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEG-QGVLHLAA 703
            +  A+  +N                ++L+S   +K  +      +    G    L    
Sbjct: 68  CLYYAHYNRN---------------AKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLC 112

Query: 704 SLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPE 763
            L         +T+   +       + A   AA  G    +  L  L     ++     E
Sbjct: 113 LL---------LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTE-IMAMIQAE 162

Query: 764 FPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA 814
              +     LA+ NGH  +          + L  L   ++      E+  A
Sbjct: 163 ---NYHAFRLAAENGHLHV---------LNRLCELAPTEATAMIQAENYYA 201

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 47.6 bits (113), Expect = 2e-05
 Identities = 18/147 (12%), Positives = 38/147 (25%), Gaps = 21/147 (14%)

Query: 653 KNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDE---GQGVLHLAASLGYDW 709
           +   ++V  +        +++     +    DG    +   E   G  +L        + 
Sbjct: 234 EYGEKYVNPFIARHVNRLKEM-HDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEV 292

Query: 710 AIK--------PTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPS 761
            +         P + A              L  A   G +   A+LLS+ +   L     
Sbjct: 293 LLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTKA-- 350

Query: 762 PEFPLSRTPSDLASSNGHKGISGFLAE 788
                      +  + G   +     E
Sbjct: 351 -------NNYYINETGGRLDLRAVALE 370

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 47.1 bits (111), Expect = 2e-05
 Identities = 25/128 (19%), Positives = 37/128 (28%), Gaps = 14/128 (10%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
             +    L  A +     A +  +  G ++N  D +G   LH A   G      + L  G
Sbjct: 232 GQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRG 291

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALED 811
           A  G            R P  +A    +  I         T L L+      A  G   D
Sbjct: 292 ADLGARD------SEGRDPLTIAMETANADIV--------TLLRLAKMREAEAAQGQAGD 337

Query: 812 SIAKAVQT 819
                +  
Sbjct: 338 ETYLDIFR 345

>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A Length = 138

 Score = 43.1 bits (101), Expect = 6e-05
 Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 8/81 (9%)

Query: 493 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIP 552
            I   SP   +T     V++ G                +F  + V +E++    +  + P
Sbjct: 7   CIKAISPSEGWTTGGATVIIIGDNFFDG-------LQVVFGTMLVWSELITPHAIRVQTP 59

Query: 553 P-HAVGRVPFYITCSNRLACS 572
           P H  G V   ++  ++  C 
Sbjct: 60  PRHIPGVVEVTLSYKSKQFCK 80

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	1078
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-11
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	6e-09
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	8e-08
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	8e-08
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	5e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	6e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-04
d2cxka1	82	b.1.18.1 (A:872-953) Calmodulin binding transcript	2e-10
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-10
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-06
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-04
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	0.003
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-08
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-07
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-04
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	1e-08
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	2e-08
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-08
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	5e-05
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	7e-05
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-04
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-07
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	0.003
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	3e-07
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	6e-06
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-05
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	3e-07
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	6e-07
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	5e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	6e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	3e-04
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-05
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	0.004
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-05
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	0.003
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	3e-05
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	3e-05
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-04
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.001
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.002
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.002
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-04
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	3e-04
d1qhoa1	81	b.1.18.2 (A:496-576) Five domain "maltogenic" alph	0.001
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	0.001

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (157), Expect = 2e-11
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 6/90 (6%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 758
           LH+A+ +G+   +K  +  G S N  ++   T LH AA  G  +    LL   A      
Sbjct: 4   LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKA------ 57

Query: 759 DPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
             + +    +TP   A+  GH  +   L E
Sbjct: 58  KVNAKAKDDQTPLHCAARIGHTNMVKLLLE 87

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (137), Expect = 6e-09
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 6/104 (5%)

Query: 683 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK 742
           + G         G   LH+A+  G    +K  +     +N +   G++ LH AA  G   
Sbjct: 285 KHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTD 344

Query: 743 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
            V +LL  GA+P  ++          TP  +A   G+  ++  L
Sbjct: 345 IVTLLLKNGASPNEVSS------DGTTPLAIAKRLGYISVTDVL 382

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 8e-08
 Identities = 17/77 (22%), Positives = 25/77 (32%)

Query: 674 YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALH 733
              L++ + +           G   LH AA  G+   +   +  G S N     G T L 
Sbjct: 309 NIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLA 368

Query: 734 WAAYCGREKTVAVLLSL 750
            A   G      VL  +
Sbjct: 369 IAKRLGYISVTDVLKVV 385

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 8e-08
 Identities = 20/78 (25%), Positives = 35/78 (44%)

Query: 677 LLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA 736
           +++ + + G  P + + + +  LH+AA  G+    K  +     +N +     T LH AA
Sbjct: 15  IVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAA 74

Query: 737 YCGREKTVAVLLSLGAAP 754
             G    V +LL   A P
Sbjct: 75  RIGHTNMVKLLLENNANP 92

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (112), Expect = 5e-06
 Identities = 20/101 (19%), Positives = 34/101 (33%)

Query: 654 NLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKP 713
           N +           I   + +   +  + E       +  +G   LH+AA  G     + 
Sbjct: 91  NPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAEL 150

Query: 714 TVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 754
            +      N    +G T LH A +      V +LL  G +P
Sbjct: 151 LLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP 191

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 4e-05
 Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 4/104 (3%)

Query: 649 ANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYD 708
            +P            I  K  + ++   LL+              +G   LHLAA  G+ 
Sbjct: 189 GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS----ANAESVQGVTPLHLAAQEGHA 244

Query: 709 WAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 752
             +   ++   + N  + SG T LH  A  G      VL+  G 
Sbjct: 245 EMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGV 288

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 6e-05
 Identities = 24/100 (24%), Positives = 36/100 (36%), Gaps = 6/100 (6%)

Query: 683 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK 742
           E    P      G   LH+A        +K  +  G S +    +G+T LH AA   + +
Sbjct: 153 ERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVE 212

Query: 743 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 782
               LL  G +    +          TP  LA+  GH  +
Sbjct: 213 VARSLLQYGGSANAESVQGV------TPLHLAAQEGHAEM 246

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (98), Expect = 2e-04
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 6/59 (10%)

Query: 730 TALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
           T LH A++ G    V  LL  GA       P+       TP  +A+  GH  ++ +L +
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGA------SPNVSNVKVETPLHMAARAGHTEVAKYLLQ 54

>d2cxka1 b.1.18.1 (A:872-953) Calmodulin binding transcription activator 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 82

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: Calmodulin binding transcription activator 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (134), Expect = 2e-10
 Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 6/86 (6%)

Query: 494 IIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPP 553
           + D+SP+W+Y +  ++V++TG + ++        +SC+F ++ VPA ++  GVL C  P 
Sbjct: 2   VTDYSPEWSYPEGGVKVLITGPWQEAS-----NNYSCLFDQISVPASLIQPGVLRCYCPA 56

Query: 554 HAVGRVPFYITCSNRLACSEVREFDY 579
           H  G V   +  +N++  + V  F+Y
Sbjct: 57  HDTGLVTLQVAFNNQIISNSV-VFEY 81

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (143), Expect = 5e-10
 Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 5/109 (4%)

Query: 647 VEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLG 706
           V A      +  +           E +   LL      G    +  + G+  L LA    
Sbjct: 175 VNACDNMGRNALIHALLSSDDSDVEAITHLLLDH----GADVNVRGERGKTPLILAVEKK 230

Query: 707 YDWAIKPTVT-AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 754
           +   ++  +    + IN  D  G TAL  A     +K   +L   GA+ 
Sbjct: 231 HLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 3e-06
 Identities = 18/72 (25%), Positives = 22/72 (30%), Gaps = 5/72 (6%)

Query: 717 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS 776
            G  +N R   G T L  A        V  LL         TD        +T   LA  
Sbjct: 208 HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD-----GKTALLLAVE 262

Query: 777 NGHKGISGFLAE 788
              K I+  L +
Sbjct: 263 LKLKKIAELLCK 274

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (98), Expect = 2e-04
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 694 EGQGVLHLAASLGYDWAIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLL 748
           E   +L  A        ++  +  G ++NF++   GWT LH A    RE  V +LL
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL 59

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 0.003
 Identities = 23/90 (25%), Positives = 30/90 (33%), Gaps = 10/90 (11%)

Query: 674 YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD-------- 725
              LL+     G      D  G      AA  G   A+K     G ++N R         
Sbjct: 84  SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQER 143

Query: 726 --LSGWTALHWAAYCGREKTVAVLLSLGAA 753
               G TAL  AA  G  + + +LL    A
Sbjct: 144 LRKGGATALMDAAEKGHVEVLKILLDEMGA 173

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 55.5 bits (132), Expect = 1e-08
 Identities = 17/84 (20%), Positives = 28/84 (33%)

Query: 665 LQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFR 724
           L    +      +   V E G      D++G+  + LAA  G    +   +  G S+   
Sbjct: 191 LHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAV 250

Query: 725 DLSGWTALHWAAYCGREKTVAVLL 748
           D +  TA   A        V +  
Sbjct: 251 DATDHTARQLAQANNHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 51.3 bits (121), Expect = 2e-07
 Identities = 18/80 (22%), Positives = 25/80 (31%), Gaps = 6/80 (7%)

Query: 707 YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPL 766
                      G + + +D  G T +  AA  GR + V  L+  GA              
Sbjct: 200 MPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGA------SVEAVDAT 253

Query: 767 SRTPSDLASSNGHKGISGFL 786
             T   LA +N H  I    
Sbjct: 254 DHTARQLAQANNHHNIVDIF 273

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 699 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGL 756
           LH  A+ G     +P     V+I        T LHW A     +    L+   A   +
Sbjct: 6   LHTEAA-GSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECI 61

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 57.0 bits (137), Expect = 1e-08
 Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 903 HSAAIQIQKKFRGWKKRKEFLLIRQR---IVKIQAHVRGHQARKKYR 946
                  Q + RG+  R E+  + +R   I  IQ +VR     K + 
Sbjct: 735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWP 781

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 56.3 bits (135), Expect = 2e-08
 Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 903 HSAAIQIQKKFRGWKKRKEFLLIRQR---IVKIQAHVRGHQARKKYR 946
                  Q   RG+  RK +  ++ +   +  IQ ++R     + ++
Sbjct: 731 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ 777

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 54.5 bits (130), Expect = 3e-08
 Identities = 20/155 (12%), Positives = 50/155 (32%), Gaps = 10/155 (6%)

Query: 603 HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKY 662
           +L +  I +  + PQ  L         L   + Q         ++  + ++ +   +   
Sbjct: 1   NLTIHNIENYENDPQLRL-----IPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGT 55

Query: 663 QILQKIMKE--KLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIK---PTVTA 717
           + ++++ +     Y+   R   +          + + +  +AA  G   A+      +T+
Sbjct: 56  KNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTS 115

Query: 718 GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 752
              +       + A   AA  G    +  L  L  
Sbjct: 116 DEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAP 150

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 44.5 bits (104), Expect = 5e-05
 Identities = 11/65 (16%), Positives = 17/65 (26%), Gaps = 2/65 (3%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLS--GWTALHWAAYCGREKTVAVLLS 749
             E      LAA  G+   +        +     +    + A   AA  G    +  L  
Sbjct: 123 QAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCE 182

Query: 750 LGAAP 754
           L    
Sbjct: 183 LAPTE 187

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 43.7 bits (102), Expect = 7e-05
 Identities = 13/71 (18%), Positives = 19/71 (26%), Gaps = 5/71 (7%)

Query: 686 KGPCILDDEGQGVLHLAASLGYDWAIK-----PTVTAGVSINFRDLSGWTALHWAAYCGR 740
           K  C+        L           I+     P + A              L  A   G 
Sbjct: 270 KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGN 329

Query: 741 EKTVAVLLSLG 751
           +   A+LLS+ 
Sbjct: 330 QGACALLLSIP 340

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 17/107 (15%), Positives = 27/107 (25%), Gaps = 16/107 (14%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
             E      L+   G             S   +       L           +  LLS+ 
Sbjct: 249 LKEMHDAFKLSNPDGV------FDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIP 302

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSL 798
               L    +     +     LA   G++G           +LLLS+
Sbjct: 303 GIKALAPTATIP-GDANELLRLALRLGNQGA---------CALLLSI 339

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 52.4 bits (124), Expect = 1e-07
 Identities = 26/138 (18%), Positives = 54/138 (39%), Gaps = 6/138 (4%)

Query: 643 SYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLA 702
             + +E   +  +++     +  +K  +  +     + +             G   LH+A
Sbjct: 147 EEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVA 206

Query: 703 ASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSP 762
           A+ GY   +K  + A   +N +D  GWT LH AA+ G+E+   +L+        +     
Sbjct: 207 AAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNK--- 263

Query: 763 EFPLSRTPSDLASSNGHK 780
              + +T  D+A  +   
Sbjct: 264 ---VGQTAFDVADEDILG 278

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 13/53 (24%), Positives = 20/53 (37%)

Query: 691 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT 743
           +  +   V   A S G    +   +  G  IN+ ++ G TALH A        
Sbjct: 36  VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDM 88

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.2 bits (121), Expect = 3e-07
 Identities = 21/112 (18%), Positives = 34/112 (30%), Gaps = 9/112 (8%)

Query: 666 QKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT---AGVSIN 722
               K  L   +   V +  +      +E +   +       D  ++           +N
Sbjct: 194 SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN 253

Query: 723 FRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLA 774
            +D +G T L+ AA  G    V  LL  GA P +             P D  
Sbjct: 254 AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANK------SGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.0 bits (110), Expect = 6e-06
 Identities = 39/250 (15%), Positives = 77/250 (30%), Gaps = 23/250 (9%)

Query: 608 RILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQK 667
           +I+    SP  + +E   + +  + +++  + +E    +   +  +N S+     Q  Q 
Sbjct: 20  KIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRN-SEGGSSNQQQQH 78

Query: 668 IMKEKLYSWLLRKVCEDGKGPCI-----LDDEGQGVLHLAASLGYDWAIKPTVTAGVSIN 722
           +  + L    L++V +      +     +D+ G   LH   S+     +K  V  G +  
Sbjct: 79  VSFDSL----LQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL 134

Query: 723 FRDLSGWTALHWA---AYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGH 779
           + D  G + L  A          T   LL       +L D        RT          
Sbjct: 135 YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMN-----RTILHHIIITSG 189

Query: 780 KGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSL 839
                  A+  L  L+  +                   +            +   + L L
Sbjct: 190 MTGCSAAAKYYLDILMGWI-----VKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDL 244

Query: 840 KDSLTAICNA 849
           K  +  + NA
Sbjct: 245 KWIIANMLNA 254

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 11/45 (24%), Positives = 18/45 (40%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA 736
           D  G   L++AA LG    +   +  G      + SG   + + A
Sbjct: 256 DSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.9 bits (120), Expect = 3e-07
 Identities = 31/182 (17%), Positives = 50/182 (27%), Gaps = 16/182 (8%)

Query: 691 LDDEGQGVLHLAASLGYDWAIKPTVTAGVS---INFRDLSGWTALHWAAYCGREKTVAVL 747
           + ++G   LHLA    ++  +   +        ++ ++  G TALH AA  G   TV  L
Sbjct: 5   VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64

Query: 748 LSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDG 807
            + G                 T   LA        +  L       L         A D 
Sbjct: 65  YAAG------AGVLVAERGGHTALHLACRVRAHTCACVL-------LQPRPSHPRDASDT 111

Query: 808 ALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQR 867
            L  S      T     A  +  N E++     +       A            +     
Sbjct: 112 YLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDA 171

Query: 868 KQ 869
           + 
Sbjct: 172 EM 173

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.7 bits (117), Expect = 6e-07
 Identities = 10/51 (19%), Positives = 15/51 (29%)

Query: 703 ASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAA 753
                   ++  + AG     R   G T L  A          +L + GA 
Sbjct: 200 VEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.4 bits (111), Expect = 4e-06
 Identities = 15/59 (25%), Positives = 20/59 (33%), Gaps = 3/59 (5%)

Query: 721 INFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGH 779
             +    G TALH A     E  +  LL   A    L   +      +T   LA+  G 
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDL---GQTALHLAAILGE 57

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (109), Expect = 5e-06
 Identities = 12/74 (16%), Positives = 25/74 (33%)

Query: 671 EKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWT 730
           E     +++ + + G         G   LH A+  G    ++  V +G   + ++    T
Sbjct: 153 ENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDT 212

Query: 731 ALHWAAYCGREKTV 744
            L  A        +
Sbjct: 213 PLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (108), Expect = 6e-06
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 6/126 (4%)

Query: 657 QHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT 716
           ++ +    L   +  +    +   +        +    G+  L  A        ++  + 
Sbjct: 106 RNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQ 165

Query: 717 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS 776
            G ++N +  SG +ALH A+  G    V  L+  GA      D S +   + TP  +A S
Sbjct: 166 HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGA------DSSLKNCHNDTPLMVARS 219

Query: 777 NGHKGI 782
                I
Sbjct: 220 RRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (94), Expect = 3e-04
 Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 4/50 (8%)

Query: 693 DEGQGVLHLAASLGYDWA----IKPTVTAGVSINFRDLSGWTALHWAAYC 738
           ++G   LH+A   G   A    +      G  ++  +    T LH A   
Sbjct: 1   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVIT 50

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 44.8 bits (104), Expect = 2e-05
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           D+ G+  LH AA++    A+   +    + + +D    T L  AA  G  +    LL   
Sbjct: 120 DNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNF 179

Query: 752 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 786
           A   +         + R P D+AS   H  I   L
Sbjct: 180 ANREITDH------MDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 37.5 bits (85), Expect = 0.004
 Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 715 VTAGVSINFR-DLSGWTALHWAAYCGREKTVAVL 747
           +  G  +N   D +G T+LH AA   R      L
Sbjct: 9   LAQGAELNATMDKTGETSLHLAARFARADAAKRL 42

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (104), Expect = 2e-05
 Identities = 12/79 (15%), Positives = 20/79 (25%)

Query: 674 YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALH 733
              +   V             G+  LHLA  L     +   +  G  +N     G++   
Sbjct: 124 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQ 183

Query: 734 WAAYCGREKTVAVLLSLGA 752
                   +    L  L  
Sbjct: 184 LTWGRPSTRIQQQLGQLTL 202

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (86), Expect = 0.003
 Identities = 11/49 (22%), Positives = 16/49 (32%), Gaps = 4/49 (8%)

Query: 694 EGQGVLHLAASLGYDWAIKPTVT----AGVSINFRDLSGWTALHWAAYC 738
           +G   LHLA            +         +NF++    T LH A   
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVIT 49

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 3e-05
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 1/93 (1%)

Query: 657 QHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT 716
                            +   L+ + E G    + D  G   +HLA   G+   +     
Sbjct: 63  VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA- 121

Query: 717 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLS 749
           A   ++ RD  G T L  A   G +  V +L  
Sbjct: 122 AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.9 bits (99), Expect = 3e-05
 Identities = 11/74 (14%), Positives = 26/74 (35%)

Query: 674 YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALH 733
           ++ ++  + + G      D      LH A    +   ++  +  G  ++ +     TA  
Sbjct: 79  HANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFD 138

Query: 734 WAAYCGREKTVAVL 747
            +   G E    +L
Sbjct: 139 ISIDNGNEDLAEIL 152

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 2e-04
 Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 7/106 (6%)

Query: 683 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK 742
           E G  P   D      +H AA+ G    I   +    S N +D  G T LH A    R +
Sbjct: 124 EGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVE 183

Query: 743 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 788
              +L+S GA          E    +TP  +A   G   I   + E
Sbjct: 184 EAKLLVSQGA------SIYIENKEEKTPLQVA-KGGLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 0.001
 Identities = 18/81 (22%), Positives = 26/81 (32%), Gaps = 1/81 (1%)

Query: 668 IMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLS 727
               K    ++  +        I D EG   LHLA         K  V+ G SI   +  
Sbjct: 142 RAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKE 201

Query: 728 GWTALHWAAYCGREKTVAVLL 748
             T L  A   G    +  ++
Sbjct: 202 EKTPLQVAKG-GLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 0.002
 Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 33/96 (34%)

Query: 692 DDEGQGVLHLAASLGYDWAIKPT---------------------------------VTAG 718
           D + +  LH A S G+   ++                                   +  G
Sbjct: 34  DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKG 93

Query: 719 VSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 754
             +N  + +G T LH+AA   R +   +LL  GA P
Sbjct: 94  AQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP 129

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 0.002
 Identities = 17/63 (26%), Positives = 26/63 (41%)

Query: 685 GKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTV 744
           G     ++  G   LH AAS          +  G + + +D    TA+H AA  G  K +
Sbjct: 93  GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 152

Query: 745 AVL 747
            +L
Sbjct: 153 HIL 155

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.0 bits (94), Expect = 3e-04
 Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 699 LHLAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           LH A      + ++  + +    +  +D  G   LHW+      +  + LLS  
Sbjct: 4   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKM 57

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (92), Expect = 3e-04
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 721 INFRDLSGWTALHWAAYCGREKTVAVLLSLG 751
           +  R+  G TA   A   GR + V+++ + G
Sbjct: 126 VGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1qhoa1 b.1.18.2 (A:496-576) Five domain "maltogenic" alpha-amylase (glucan 1,4-alpha-maltohydrolase), domain D {Bacillus stearothermophilus [TaxId: 1422]} Length = 81

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: Five domain "maltogenic" alpha-amylase (glucan 1,4-alpha-maltohydrolase), domain D
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 12/75 (16%), Positives = 19/75 (25%), Gaps = 8/75 (10%)

Query: 493 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIP 552
            I   +P      P   V + G    + Q          F  V    +      +   +P
Sbjct: 5   QIGSVAP--NMGIPGNVVTIDGKGFGTTQGT------VTFGGVTATVKSWTSNRIEVYVP 56

Query: 553 PHAVGRVPFYITCSN 567
             A G     +T   
Sbjct: 57  NMAAGLTDVKVTAGG 71

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.0 bits (87), Expect = 0.001
 Identities = 13/76 (17%), Positives = 24/76 (31%)

Query: 677 LLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA 736
           ++  + ++         +G   LH          +K  +    SI   + SG T L  A 
Sbjct: 63  IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 122

Query: 737 YCGREKTVAVLLSLGA 752
               E    +L    +
Sbjct: 123 RLKHEHCEELLTQALS 138

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	1078
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.95
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.95
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.94
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.94
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.94
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.94
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.93
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.93
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.92
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.91
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.9
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.9
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.88
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.87
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.83
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.83
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.83
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.8
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.79
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.79
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.78
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.78
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.78
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.77
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.77
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.76
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.75
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.74
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.73
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.72
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.71
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.69
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.69
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.68
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.59
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	98.33
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	98.33
d2cxka1	82	Calmodulin binding transcription activator 1 {Huma	98.11
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	97.82
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	97.8
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	94.06
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	93.99

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-30  Score=228.05  Aligned_cols=240  Identities=16%  Similarity=0.133  Sum_probs=109.2

Q ss_pred             HHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH-----
Q ss_conf             656239923799999879976678999999813789995799642011212002889997555788998127779-----
Q 001436          528 WSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-----  602 (1078)
Q Consensus       528 ~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl-----  602 (1078)
                      +++..|+.+++..|++.|..  ....+..|.+||+.|+..+.  .++++  +++..+++++..+..|  .++++.     
T Consensus       138 ~a~~~~~~~~v~~ll~~~~~--~~~~~~~~~~~L~~A~~~~~--~~~~~--~Ll~~g~~~~~~~~~~--~t~l~~~~~~~  209 (408)
T d1n11a_         138 VAAKYGKVRVAELLLERDAH--PNAAGKNGLTPLHVAVHHNN--LDIVK--LLLPRGGSPHSPAWNG--YTPLHIAAKQN  209 (408)
T ss_dssp             HHHHTTCHHHHHHHHHTTCC--TTCCCSSCCCHHHHHHHTTC--HHHHH--HHGGGTCCSCCCCTTC--CCHHHHHHHTT
T ss_pred             HHHHCCCHHHHHHHHHCCCC--CCCCCCCCCHHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCCCHHHHCCC
T ss_conf             99875989999999976998--88678767409999998599--99999--9986588400457789--97102432021


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH
Q ss_conf             89999999819999867764713199999996151167899887512998876745310159999999719799999999
Q 001436          603 HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVC  682 (1078)
Q Consensus       603 ~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Ll  682 (1078)
                      ...+...|+.........+..+.+++++++..+.  .+.++.++......+..+..+  .++++.++..+ ...++++|+
T Consensus       210 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~--~~~~~~~~~~~~~~~~~~~~g--~~~l~~a~~~~-~~~i~~~Ll  284 (408)
T d1n11a_         210 QVEVARSLLQYGGSANAESVQGVTPLHLAAQEGH--AEMVALLLSKQANGNLGNKSG--LTPLHLVAQEG-HVPVADVLI  284 (408)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC--HHHHHHHHTTTCCTTCCCTTC--CCHHHHHHHHT-CHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC--HHHHHHHHCCCCCCCCCCCCC--CCHHHHHHHCC-CHHHHHHHH
T ss_conf             0455555432001221247789999999998086--767544200221111124789--97334543028-489999999


Q ss_pred             HCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             68999985589999398999982998889999967999631389995088999982999999999975999998889999
Q 001436          683 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSP  762 (1078)
Q Consensus       683 e~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~  762 (1078)
                      +.|++++..+..+.||||.++..++.++++.++..|+++|.+|.+|.||||+|+.+|+.++|++|+++||++++      
T Consensus       285 ~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~------  358 (408)
T d1n11a_         285 KHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE------  358 (408)
T ss_dssp             HHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC------
T ss_pred             HCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC------
T ss_conf             77996562102344530221005862135530133332234689999999999986889999999987889988------


Q ss_pred             CCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             999999989999966949999999
Q 001436          763 EFPLSRTPSDLASSNGHKGISGFL  786 (1078)
Q Consensus       763 ~d~~G~TPLhlAa~~G~~~iv~~L  786 (1078)
                      +|..|.||||+|+.+||.+++++|
T Consensus       359 ~d~~G~t~L~~A~~~~~~~iv~~L  382 (408)
T d1n11a_         359 VSSDGTTPLAIAKRLGYISVTDVL  382 (408)
T ss_dssp             CCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHCCCHHHHHHH
T ss_conf             799998999999983999999999

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.2e-28  Score=217.93  Aligned_cols=297  Identities=16%  Similarity=0.174  Sum_probs=204.9

Q ss_pred             CCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH-
Q ss_conf             3320656239923799999879976678999999813789995799642011212002889997555788998127779-
Q 001436          524 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-  602 (1078)
Q Consensus       524 ~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl-  602 (1078)
                      |.++.||..|+.+++..|++.|++  ++..+..|.||||+||..|+  .++++  +++..|++++..+..|  .+++++ 
T Consensus         2 TpL~~Aa~~g~~~~v~~Ll~~g~~--in~~d~~g~TpL~~A~~~g~--~~iv~--~Ll~~gadi~~~~~~g--~t~L~~A   73 (408)
T d1n11a_           2 TPLHVASFMGHLPIVKNLLQRGAS--PNVSNVKVETPLHMAARAGH--TEVAK--YLLQNKAKVNAKAKDD--QTPLHCA   73 (408)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTCC--SCCSSSCCCCHHHHHHHHTC--HHHHH--HHHHHTCCSSCCCTTS--CCHHHHH
T ss_pred             CHHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHH
T ss_conf             869999988489999999978789--99889999889999998688--99999--9998859988779998--9999999


Q ss_pred             ----HHH------------------------------------------------------------------HHHHHHH
Q ss_conf             ----899------------------------------------------------------------------9999981
Q 001436          603 ----HLR------------------------------------------------------------------LERILSM  612 (1078)
Q Consensus       603 ----~~r------------------------------------------------------------------ivkLLl~  612 (1078)
                          +.+                                                                  +++.|+.
T Consensus        74 ~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~  153 (408)
T d1n11a_          74 ARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLE  153 (408)
T ss_dssp             HHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             HHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf             98699779999987410012321112202455543033222222221100100145646428999987598999999997


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
Q ss_conf             99998677647131999999961511678998875129988767453101599999997197999999996899998558
Q 001436          613 RSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILD  692 (1078)
Q Consensus       613 ~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~Gadin~~d  692 (1078)
                      .+...+..+..+.++++.|...+++  +.++.|+..+++.+..+..+  .++++.+... ........++..+......+
T Consensus       154 ~~~~~~~~~~~~~~~L~~A~~~~~~--~~~~~Ll~~g~~~~~~~~~~--~t~l~~~~~~-~~~~~~~~l~~~~~~~~~~~  228 (408)
T d1n11a_         154 RDAHPNAAGKNGLTPLHVAVHHNNL--DIVKLLLPRGGSPHSPAWNG--YTPLHIAAKQ-NQVEVARSLLQYGGSANAES  228 (408)
T ss_dssp             TTCCTTCCCSSCCCHHHHHHHTTCH--HHHHHHGGGTCCSCCCCTTC--CCHHHHHHHT-TCHHHHHHHHHTTCCTTCCC
T ss_pred             CCCCCCCCCCCCCHHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCC--CCCCHHHHCC-CHHHHHHHHHHCCCCCCCCC
T ss_conf             6998886787674099999985999--99999986588400457789--9710243202-10455555432001221247


Q ss_pred             CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             99993989999829988899999679996313899950889999829999999999759999988899999999999899
Q 001436          693 DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSD  772 (1078)
Q Consensus       693 ~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLh  772 (1078)
                      ..|.||||+|+..+...+++.++..+..++..+..|.|||+.|+..++.+++++|++.|++++...      ..+.||||
T Consensus       229 ~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~------~~~~t~L~  302 (408)
T d1n11a_         229 VQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT------RMGYTPLH  302 (408)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC------SSCCCHHH
T ss_pred             CCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC------CCCCCCCH
T ss_conf             789999999998086767544200221111124789973345430284899999997799656210------23445302


Q ss_pred             HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHH
Q ss_conf             99966949999999982797433357558899999468759----99999999814799999997310000001889998
Q 001436          773 LASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDESDVLSLKDSLTAICN  848 (1078)
Q Consensus       773 lAa~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~----~~~v~~Lle~~a~~~~~~~~e~~lslkdsltAlr~  848 (1078)
                      .++..++..+++++++.|+     +++.+|..|.||+|.|.    .++++.|+++||+++..+        ++|.||++.
T Consensus       303 ~~~~~~~~~~~~~ll~~g~-----~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d--------~~G~t~L~~  369 (408)
T d1n11a_         303 VASHYGNIKLVKFLLQHQA-----DVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVS--------SDGTTPLAI  369 (408)
T ss_dssp             HHHHSSCSHHHHHHHHTTC-----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC--------SSSCCHHHH
T ss_pred             HHCCCCCCEEEEEECCCCC-----CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC--------CCCCCHHHH
T ss_conf             2100586213553013333-----223468999999999998688999999998788998879--------999899999


Q ss_pred             HHHH
Q ss_conf             7877
Q 001436          849 ATQA  852 (1078)
Q Consensus       849 AaqA  852 (1078)
                      |+..
T Consensus       370 A~~~  373 (408)
T d1n11a_         370 AKRL  373 (408)
T ss_dssp             HHHT
T ss_pred             HHHC
T ss_conf             9983

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.6e-24  Score=190.13  Aligned_cols=257  Identities=14%  Similarity=0.039  Sum_probs=197.9

Q ss_pred             CCHHHHHCCCCHHHHHHHHCCCCCCCCC-CCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH-
Q ss_conf             3206562399237999998799766789-99999813789995799642011212002889997555788998127779-
Q 001436          525 KCKWSCMFAEVEVPAEVLADGVLCCRIP-PHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-  602 (1078)
Q Consensus       525 ~~~~Ac~fG~veVv~~LLq~Gv~rC~~p-~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl-  602 (1078)
                      .+.+||..|+++++..||+.|++  ++. .+..|.||||+|+.++.  .++++  ++...+...+..+..+  .++.+. 
T Consensus         8 ~L~~Ai~~~~~e~vk~Ll~~G~d--in~~~~~~g~tpL~~A~~~~~--~eiv~--~L~~~~~~~~~~~~~~--~~~~~~~   79 (285)
T d1wdya_           8 LLIKAVQNEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSR--EDIVE--LLLRHGADPVLRKKNG--ATPFLLA   79 (285)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHCCC--HHHHH--HHCCCCCCCCCCCCCC--CHHHHHH
T ss_conf             99999982999999999987989--682489999799999998599--98865--5202343222222111--1146777


Q ss_pred             ----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC--------CCCHHHHHHHH
Q ss_conf             ----899999998199998677647131999999961511678998875129988767453--------10159999999
Q 001436          603 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHV--------EKYQILQKIMK  670 (1078)
Q Consensus       603 ----~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~--------~~~t~L~~aa~  670 (1078)
                          ......+++.........+..+.+.++.+...+..  ..+..++....+.+......        ...++++.++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~  157 (285)
T d1wdya_          80 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV--KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE  157 (285)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCH--HHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred             HHCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCH--HHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHH
T ss_conf             643875322113431022101356898636788874001--254454431001132321012222201468569999998


Q ss_pred             HCCHHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCC----CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHH
Q ss_conf             7197999999996-89999855899993989999829----988899999679996313899950889999829999999
Q 001436          671 EKLYSWLLRKVCE-DGKGPCILDDEGQGVLHLAASLG----YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVA  745 (1078)
Q Consensus       671 ~~~~~~lv~~Lle-~Gadin~~d~~G~TpLHlAa~~G----~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~  745 (1078)
                      .+ ...+++.|++ .|++++..+..|.++++.+...+    ...+++.|++.|++++.+|..|.||||+|+..|+.++|+
T Consensus       158 ~~-~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~  236 (285)
T d1wdya_         158 KG-HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQ  236 (285)
T ss_dssp             HT-CHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             CC-CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHH
T ss_conf             68-99999999845698945546789833223322343017999999999779998866899998241122138699999


Q ss_pred             HHHH-CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             9997-599999888999999999998999996694999999998279743335755889
Q 001436          746 VLLS-LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDS  803 (1078)
Q Consensus       746 ~LL~-~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~ladln~~d~  803 (1078)
                      +||. .|++++.      +|..|.||||+|+..|+.+++++|+++|++     +|++|.
T Consensus       237 ~lL~~~g~din~------~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd-----~n~~d~  284 (285)
T d1wdya_         237 RLLEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRGAS-----TDCGDL  284 (285)
T ss_dssp             HHHHSSSCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHSSC-----SCCSSC
T ss_pred             HHHHCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCC
T ss_conf             999808999868------799998999999985979999999987989-----986017

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=1.5e-26  Score=204.68  Aligned_cols=233  Identities=12%  Similarity=-0.015  Sum_probs=157.3

Q ss_pred             CCCHHHHHCCCCHHHHHHHHCCCCCC-CCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             33206562399237999998799766-78999999813789995799642011212002889997555788998127779
Q 001436          524 AKCKWSCMFAEVEVPAEVLADGVLCC-RIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL  602 (1078)
Q Consensus       524 ~~~~~Ac~fG~veVv~~LLq~Gv~rC-~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl  602 (1078)
                      +.+++||..|+.+++..||+.|+... ....+..|.||||+||.+|+  .++++  +++..+++++..+..|  .+|+++
T Consensus        11 t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~--~~iv~--~Ll~~ga~i~~~d~~g--~tpL~~   84 (255)
T d1oy3d_          11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGE--ASTVE--KLYAAGAGVLVAERGG--HTALHL   84 (255)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTC--HHHHH--HHHHTTCCSSCCCTTS--CCHHHH
T ss_pred             CHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCC--CCCCC--CCCCCCCCCCCCCCCC--CHHHHH
T ss_conf             89999998588999999998699900115758999972406876245--43232--2223333322322222--102333


Q ss_pred             -----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHH
Q ss_conf             -----899999998199998677647131999999961511678998875129988767453101599999997197999
Q 001436          603 -----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWL  677 (1078)
Q Consensus       603 -----~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~l  677 (1078)
                           +..++++|+...............   . ....     ....               .....+............
T Consensus        85 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~---~-~~~~-----~~~~---------------~~~~~~~~~~~~~~~~~~  140 (255)
T d1oy3d_          85 ACRVRAHTCACVLLQPRPSHPRDASDTYL---T-QSQD-----CTPD---------------TSHAPAAVDSQPNPENEE  140 (255)
T ss_dssp             HTTTTCHHHHHHHSSSCCSSCCCC--------------------------------------------------------
T ss_pred             HHCCCCHHHHHHHHHHCCCHHCCCCHHHH---H-HHHH-----HCCC---------------CHHHHHHHHHHCCHHHHH
T ss_conf             32268258999998614201012202566---6-7765-----2243---------------067799998620306789


Q ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf             99999689999855899993989999829988899999679996313-89995088999982999999999975999998
Q 001436          678 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFR-DLSGWTALHWAAYCGREKTVAVLLSLGAAPGL  756 (1078)
Q Consensus       678 v~~Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~-D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna  756 (1078)
                      .......+.+++.++..|.||||+||..|+.+++++|++.+++++.. +..|+||||+|+..|+.+++++|+++|++++.
T Consensus       141 ~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~  220 (255)
T d1oy3d_         141 EPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTA  220 (255)
T ss_dssp             ---CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf             98765328663310046763223332232222221000013331221334443322001233399999999987899888


Q ss_pred             CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             889999999999989999966949999999982797
Q 001436          757 LTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT  792 (1078)
Q Consensus       757 ~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~  792 (1078)
                      .      |..|.||||+|+..|+.+++++|+++|+.
T Consensus       221 ~------d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         221 R------MYGGRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             C------CTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             C------CCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             7------99999999999987889999999976989

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1e-25  Score=198.66  Aligned_cols=214  Identities=20%  Similarity=0.117  Sum_probs=143.9

Q ss_pred             HHHHHCCCCHHHHHHHHC-CCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             065623992379999987-9976678999999813789995799642011212002889997555788998127779899
Q 001436          527 KWSCMFAEVEVPAEVLAD-GVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLR  605 (1078)
Q Consensus       527 ~~Ac~fG~veVv~~LLq~-Gv~rC~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl~~r  605 (1078)
                      +-+|..|+++.++.+++. +.+  ....+..|+||||+||..|+  .+++++.  ..........+.             
T Consensus         8 ~~~a~~G~~~~v~~~l~~~~~~--~~~~D~~G~TpLh~Aa~~g~--~e~~~~l--~~~~~~~~~~~~-------------   68 (223)
T d1uoha_           8 CNLAYSGKLEELKESILADKSL--ATRTDQDSRTALHWACSAGH--TEIVEFL--LQLGVPVNDKDD-------------   68 (223)
T ss_dssp             HHHHHTTCHHHHHHHHHHCGGG--GGCCCTTSCCHHHHHHHHTC--HHHHHHH--HHHTCCSCCCCT-------------
T ss_pred             HHHHHHCCHHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHHHH--HCCCCCC--CCCCCCCCCCCC-------------
T ss_conf             9999969999999999949974--76748999888999998511--0243322--222333332222-------------


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCC
Q ss_conf             99999819999867764713199999996151167899887512998876745310159999999719799999999689
Q 001436          606 LERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDG  685 (1078)
Q Consensus       606 ivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~G  685 (1078)
                                       .+.++++.+...++  .+.++.|++.+++.+..+..+  .++++.++..+ ...++++|++.|
T Consensus        69 -----------------~~~~~~~~~~~~~~--~~i~~~Ll~~~~d~~~~d~~g--~tpL~~A~~~~-~~e~~~~Ll~~g  126 (223)
T d1uoha_          69 -----------------AGWSPLHIAASAGR--DEIVKALLGKGAQVNAVNQNG--CTPLHYAASKN-RHEIAVMLLEGG  126 (223)
T ss_dssp             -----------------TCCCHHHHHHHHTC--HHHHHHHHHTTCCTTCCCTTC--CCHHHHHHHHT-CHHHHHHHHHTT
T ss_pred             -----------------CCCCCCCCCCCCCC--CCHHHHHHCCCCEEEEECCCC--CCHHHHHHHCC-CHHHHHHHHHCC
T ss_conf             -----------------22233222222111--101677740686467548999--96626988769-899999999878


Q ss_pred             CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             99985589999398999982998889999967999631389995088999982999999999975999998889999999
Q 001436          686 KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFP  765 (1078)
Q Consensus       686 adin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~  765 (1078)
                      ++++.++..|.||||+|+..|+..++++|+..|++++.+|..|+||||+|+..|+.++|++|++.||+++.      +|.
T Consensus       127 ~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~------~d~  200 (223)
T d1uoha_         127 ANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYI------ENK  200 (223)
T ss_dssp             CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCC------CCT
T ss_pred             CCCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCCEEEECCCCCCCEECCCCCCCCHHHHHHHHHCCCCCCC------CCC
T ss_conf             99987689999501023213874202332022320120368887411210025849999999987799988------799


Q ss_pred             CCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             99998999996694999999998
Q 001436          766 LSRTPSDLASSNGHKGISGFLAE  788 (1078)
Q Consensus       766 ~G~TPLhlAa~~G~~~iv~~LLe  788 (1078)
                      .|+||||+| ..|+.+++++|++
T Consensus       201 ~g~tpl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         201 EEKTPLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             TSCCHHHHC-CTTHHHHHHHHHC
T ss_pred             CCCCHHHHH-HCCCHHHHHCCCC
T ss_conf             999999998-7789999830047

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.94  E-value=8.6e-26  Score=199.26  Aligned_cols=236  Identities=18%  Similarity=0.181  Sum_probs=188.1

Q ss_pred             CHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH---
Q ss_conf             20656239923799999879976678999999813789995799642011212002889997555788998127779---
Q 001436          526 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL---  602 (1078)
Q Consensus       526 ~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl---  602 (1078)
                      +.+||..|+++++..||+.|++  ++..+..|.||||+|+.+|+  .++++  +++..+.+....+..+  .++++.   
T Consensus        44 l~~A~~~G~~~~v~~Ll~~Gad--vn~~d~~G~T~L~~A~~~g~--~eiv~--~Ll~~~~~~~~~~~~~--~~~L~~a~~  115 (291)
T d1s70b_          44 FLAACSSGDTEEVLRLLERGAD--INYANVDGLTALHQACIDDN--VDMVK--FLVENGANINQPDNEG--WIPLHAAAS  115 (291)
T ss_dssp             HHHHHHHTCHHHHHHHHHHCCC--TTCBCTTCCBHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTS--CCHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--CEEEE--EECCCCCCCCCCCCCC--CCCCCCCCC
T ss_conf             9999985889999999987999--88668999969999986197--31211--0012223333322232--333333322


Q ss_pred             --HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH
Q ss_conf             --899999998199998677647131999999961511678998875129988767453101599999997197999999
Q 001436          603 --HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRK  680 (1078)
Q Consensus       603 --~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~  680 (1078)
                        +.++++.|+..+......+..+.++++++...+.  .+.+..++........         .................
T Consensus       116 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~ll~~~~~~~~---------~~~~~~~~~~~~~~~~~  184 (291)
T d1s70b_         116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAM--EELLQNEVNRQGVDIE---------AARKEEERIMLRDARQW  184 (291)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHH--HHHHHHHHHHHTCCHH---------HHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CHHCCCCCCCCCCCCC---------CCCCCCCCCCCCCCHHH
T ss_conf             221100110124676422222467642222111222--0001000002465321---------10000133322110011


Q ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             99689999855899993989999829988899999679996313899950889999829999999999759999988899
Q 001436          681 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDP  760 (1078)
Q Consensus       681 Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp  760 (1078)
                      +.....+....+..|.||||+|+..|+..+++.|+..|+++|.+|..|+||||+|+..|+.++|++|+++||++++    
T Consensus       185 ~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~----  260 (291)
T d1s70b_         185 LNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA----  260 (291)
T ss_dssp             HHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC----
T ss_pred             HCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC----
T ss_conf             0123211002467898730488876995441013441011242125798899999985989999999987999988----


Q ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
Q ss_conf             999999999899999669499999999827
Q 001436          761 SPEFPLSRTPSDLASSNGHKGISGFLAESS  790 (1078)
Q Consensus       761 ~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g  790 (1078)
                        +|..|.||||+|+.    +++++|.+..
T Consensus       261 --~d~~G~TaL~~A~e----~~~~~L~~~~  284 (291)
T d1s70b_         261 --VNKVGQTAFDVADE----DILGYLEELQ  284 (291)
T ss_dssp             --CCTTSCCTTTSCCS----GGGHHHHHHH
T ss_pred             --CCCCCCCHHHHHHH----HHHHHHHHHH
T ss_conf             --68999999999999----8999999986

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=7.8e-25  Score=192.35  Aligned_cols=223  Identities=20%  Similarity=0.219  Sum_probs=166.6

Q ss_pred             CCHHHHHCCCCHHHHHHHHC-CCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             32065623992379999987-99766789999998137899957996420112120028899975557889981277798
Q 001436          525 KCKWSCMFAEVEVPAEVLAD-GVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLH  603 (1078)
Q Consensus       525 ~~~~Ac~fG~veVv~~LLq~-Gv~rC~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl~  603 (1078)
                      +++|||+.|++++++.|+.. +.+  ....+..|.||||+|+..|.  .++++  +++..+++++..+..+         
T Consensus         3 pLh~A~~~g~~~~v~~Ll~~~~~~--~~~~d~~G~TpL~~A~~~g~--~~iv~--~Ll~~ga~~~~~~~~~---------   67 (229)
T d1ixva_           3 PLHQACMENEFFKVQELLHSKPSL--LLQKDQDGRIPLHWSVSFQA--HEITS--FLLSKMENVNLDDYPD---------   67 (229)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHCGGG--TTCCCTTSCCHHHHHHHTTC--HHHHH--HHHTTCTTCCGGGCCC---------
T ss_pred             HHHHHHHCCCHHHHHHHHHCCCCC--CCCCCCCCCCHHHHHHHCCC--CCCCC--HHHHHHCCCCCCCCCC---------
T ss_conf             699999868999999999809986--65659999989999998699--65441--3544301233322232---------


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
Q ss_conf             99999998199998677647131999999961511678998875129988767453101599999997197999999996
Q 001436          604 LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCE  683 (1078)
Q Consensus       604 ~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle  683 (1078)
                                        ..+.++++++.....+  +.+..++..+.............++++.++. .....++..|++
T Consensus        68 ------------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~l~~  126 (229)
T d1ixva_          68 ------------------DSGWTPFHIACSVGNL--EVVKSLYDRPLKPDLNKITNQGVTCLHLAVG-KKWFEVSQFLIE  126 (229)
T ss_dssp             ------------------TTSCCHHHHHHHHTCH--HHHHHHHSSSSCCCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHH
T ss_pred             ------------------CCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHH
T ss_conf             ------------------2222222211112332--3333322222222222232233443322123-200343222211


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCC
Q ss_conf             89999855899993989999829988899999679-9963138999508899998299999999997-599999888999
Q 001436          684 DGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCGREKTVAVLLS-LGAAPGLLTDPS  761 (1078)
Q Consensus       684 ~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~G-adin~~D~~G~TpLH~Aa~~G~~eiV~~LL~-~GAdvna~tdp~  761 (1078)
                      .|...+..+..|.||||+|+..|+..+++.|+..| .+++.+|..|+||||+|+..|+.++|++||+ .|+++++.    
T Consensus       127 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~----  202 (229)
T d1ixva_         127 NGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLV----  202 (229)
T ss_dssp             TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCC----
T ss_pred             HCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCC----
T ss_conf             0023212478899735023212453323333222222222356666781022101251999999999659998885----


Q ss_pred             CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             9999999989999966949999999982797
Q 001436          762 PEFPLSRTPSDLASSNGHKGISGFLAESSLT  792 (1078)
Q Consensus       762 ~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~  792 (1078)
                        |..|.||||+|+.   .+++++|+++|++
T Consensus       203 --d~~g~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         203 --DNKGAKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             --CTTSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             --CCCCCCHHHHHHH---HHHHHHHHHCCCC
T ss_conf             --8999999999846---7899999976999

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.6e-24  Score=188.56  Aligned_cols=194  Identities=15%  Similarity=0.123  Sum_probs=161.5

Q ss_pred             HCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
Q ss_conf             19999867764713199999996151167899887512998876745310159999999719799999999689999855
Q 001436          612 MRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCIL  691 (1078)
Q Consensus       612 ~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~Gadin~~  691 (1078)
                      ..+...+..+..|.|++|+|+..++  .+.+++++.............  .++++.++ ..++..++++|++.|++++.+
T Consensus        25 ~~~~~~~~~D~~G~TpLh~Aa~~g~--~e~~~~l~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~i~~~Ll~~~~d~~~~   99 (223)
T d1uoha_          25 ADKSLATRTDQDSRTALHWACSAGH--TEIVEFLLQLGVPVNDKDDAG--WSPLHIAA-SAGRDEIVKALLGKGAQVNAV   99 (223)
T ss_dssp             HCGGGGGCCCTTSCCHHHHHHHHTC--HHHHHHHHHHTCCSCCCCTTC--CCHHHHHH-HHTCHHHHHHHHHTTCCTTCC
T ss_pred             HCCCCCCCCCCCCCCHHHHHHHHHH--HCCCCCCCCCCCCCCCCCCCC--CCCCCCCC-CCCCCCHHHHHHCCCCEEEEE
T ss_conf             4997476748999888999998511--024332222233333222222--23322222-211110167774068646754


Q ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             89999398999982998889999967999631389995088999982999999999975999998889999999999989
Q 001436          692 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPS  771 (1078)
Q Consensus       692 d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPL  771 (1078)
                      |..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++..++++|+..|++++.      +|..|.|||
T Consensus       100 d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~------~d~~g~TpL  173 (223)
T d1uoha_         100 NQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNI------QDTEGNTPL  173 (223)
T ss_dssp             CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC------CCTTCCCHH
T ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCCEEEE------CCCCCCCEE
T ss_conf             89999662698876989999999987899987689999501023213874202332022320120------368887411


Q ss_pred             HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             999966949999999982797433357558899999468759999999998
Q 001436          772 DLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSE  822 (1078)
Q Consensus       772 hlAa~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~~~~v~~Lle  822 (1078)
                      |+|+..|+.+++++|++.|++     ++.+|..|.||+++|. .+...+++
T Consensus       174 ~~Aa~~g~~~~v~~LL~~Gad-----~~~~d~~g~tpl~~A~-~~~~~i~~  218 (223)
T d1uoha_         174 HLACDEERVEEAKLLVSQGAS-----IYIENKEEKTPLQVAK-GGLGLILK  218 (223)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCC-----SCCCCTTSCCHHHHCC-TTHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHH-CCCHHHHH
T ss_conf             210025849999999987799-----9887999999999987-78999983

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.93  E-value=8.8e-25  Score=191.95  Aligned_cols=243  Identities=18%  Similarity=0.126  Sum_probs=183.7

Q ss_pred             HHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHH------HCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             656239923799999879976678999999813789995799642011212------00288999755578899812777
Q 001436          528 WSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFD------YIVGSVKDADISDIYGSSTSESF  601 (1078)
Q Consensus       528 ~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~tPLhvAa~ng~~cseVv~fe------yl~~~~adin~~d~~g~~~t~Lh  601 (1078)
                      -++ -|..++...|.+.++.  .... ..|+||||+||.+|+  .++++++      +++..|+++|..|..|  .||||
T Consensus         8 ~~~-~~~~~~~~~l~~~~~n--~~~~-~~g~T~Lh~A~~~g~--~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G--~TpLh   79 (277)
T d2fo1e1           8 TEA-AGSYAITEPITRESVN--IIDP-RHNRTVLHWIASNSS--AEKSEDLIVHEAKECIAAGADVNAMDCDE--NTPLM   79 (277)
T ss_dssp             HHH-HSSSCCCSCCSTTTTT--TCCC-SSCCCHHHHHHCTTC--CSCCTTHHHHHHHHHHHTCCCTTCCCTTS--CCHHH
T ss_pred             HHH-CCCHHHHHHHHHCCCC--CCCC-CCCCCHHHHHHHCCC--HHHHHHHHHCCHHHHHHCCCCCCCCCCCC--CEEEC
T ss_conf             981-7988899999866998--6779-999669999998689--99999999652367987699764547888--85100


Q ss_pred             H-----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHC---CCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf             9-----89999999819999867764713199999996151167899887512---998876745310159999999719
Q 001436          602 L-----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEA---NPEKNLSQHVEKYQILQKIMKEKL  673 (1078)
Q Consensus       602 l-----~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~---ad~n~~s~~~~~~t~L~~aa~~~~  673 (1078)
                      +     +.+++++|+..|++.+..+..|.++++.+...++.  +....+....   ...+..+...  .+....+.....
T Consensus        80 ~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  155 (277)
T d2fo1e1          80 LAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF--GMMVYMLNSTKLKGDIEELDRNG--MTALMIVAHNEG  155 (277)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCH--HHHHHHTTSHHHHHTTSCCCTTS--CCHHHHHHHSCS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCH--HHHHHHHHCCCCCCCCCCCCCCC--CHHHHHHHHCCC
T ss_conf             34333333333333223222332222222222100110000--12344431145422222222211--036788875034


Q ss_pred             --HHHHHHHHHHCC--------CCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-HCCCCCCCCCCCCCHHHHHHHHCCCHH
Q ss_conf             --799999999689--------999855899993989999829988899999-679996313899950889999829999
Q 001436          674 --YSWLLRKVCEDG--------KGPCILDDEGQGVLHLAASLGYDWAIKPTV-TAGVSINFRDLSGWTALHWAAYCGREK  742 (1078)
Q Consensus       674 --~~~lv~~Lle~G--------adin~~d~~G~TpLHlAa~~G~~~iv~~LL-~~Gadin~~D~~G~TpLH~Aa~~G~~e  742 (1078)
                        ....+..+....        ...+..+..|.|+||+++..++..++..++ ..+.+++.+|..|+||||+|+..|+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~  235 (277)
T d2fo1e1         156 RDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIE  235 (277)
T ss_dssp             TTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHH
T ss_conf             33222221001123322222234555446689870000122333222223222345433346899998999999859899


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             9999997599999888999999999998999996694999999998
Q 001436          743 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE  788 (1078)
Q Consensus       743 iV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe  788 (1078)
                      +|++|++.|+++++      +|..|.||||+|+.+|+.+++++|++
T Consensus       236 iv~~Ll~~gadin~------~d~~G~T~L~~A~~~~~~~iv~lL~~  275 (277)
T d2fo1e1         236 VVMYLIQQGASVEA------VDATDHTARQLAQANNHHNIVDIFDR  275 (277)
T ss_dssp             HHHHHHHTTCCSSC------CCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             HHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHH
T ss_conf             99999987699988------69999999999998598999999997

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=6.5e-24  Score=185.68  Aligned_cols=234  Identities=12%  Similarity=0.072  Sum_probs=157.0

Q ss_pred             CCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCC---CCCCCCCCCCCCHHHH-----HHHHHHHHHHCCCCCCCCCCC
Q ss_conf             99999981378999579964201121200288999---7555788998127779-----899999998199998677647
Q 001436          552 PPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKD---ADISDIYGSSTSESFL-----HLRLERILSMRSSPQNHLSEG  623 (1078)
Q Consensus       552 p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~ad---in~~d~~g~~~t~Lhl-----~~rivkLLl~~g~~~~~~~~~  623 (1078)
                      ..+.+|.||||+||..++  .++++  +++..+++   ++..+..|  .||||+     +.+++++|+..|++.+..+..
T Consensus         4 ~i~~~G~t~Lh~A~~~~~--~~~v~--~Ll~~~a~~~~i~~~~~~g--~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~   77 (255)
T d1oy3d_           4 YVTEDGDTALHLAVIHQH--EPFLD--FLLGFSAGHEYLDLQNDLG--QTALHLAAILGEASTVEKLYAAGAGVLVAERG   77 (255)
T ss_dssp             CCCTTCCCHHHHHHHTTC--HHHHH--HHHHHHTTSGGGGCCCTTS--CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTT
T ss_pred             CCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCCCCC--CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             589599789999998588--99999--9998699900115758999--97240687624543232222333332232222


Q ss_pred             CCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf             13199999996151167899887512998876745310159999999719799999999689999855899993989999
Q 001436          624 LCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAA  703 (1078)
Q Consensus       624 g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa  703 (1078)
                      |.+++++|...+.  .+.++.|++......... .   ...+... ... .                 ......++....
T Consensus        78 g~tpL~~A~~~~~--~~~~~~Ll~~~~~~~~~~-~---~~~~~~~-~~~-~-----------------~~~~~~~~~~~~  132 (255)
T d1oy3d_          78 GHTALHLACRVRA--HTCACVLLQPRPSHPRDA-S---DTYLTQS-QDC-T-----------------PDTSHAPAAVDS  132 (255)
T ss_dssp             SCCHHHHHTTTTC--HHHHHHHSSSCCSSCCCC-----------------------------------------------
T ss_pred             CCHHHHHHHCCCC--HHHHHHHHHHCCCHHCCC-C---HHHHHHH-HHH-C-----------------CCCHHHHHHHHH
T ss_conf             2102333322682--589999986142010122-0---2566677-652-2-----------------430677999986


Q ss_pred             HCCC-HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf             8299-888999996799963138999508899998299999999997599999888999999999998999996694999
Q 001436          704 SLGY-DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI  782 (1078)
Q Consensus       704 ~~G~-~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~i  782 (1078)
                      .... ......+...+.+++.+|..|+||||+|+..|+.+++++|++.+++.+...     +..|.||||+|+..|+.++
T Consensus       133 ~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~-----~~~g~TpL~~A~~~~~~~~  207 (255)
T d1oy3d_         133 QPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPE-----PTCGRTPLHLAVEAQAASV  207 (255)
T ss_dssp             -----------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC-----TTTCCCHHHHHHHTTCHHH
T ss_pred             HCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC-----CCCCCCCCCCCCCCCHHHH
T ss_conf             20306789987653286633100467632233322322222210000133312213-----3444332200123339999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHCCCC
Q ss_conf             9999982797433357558899999468759----9999999981479
Q 001436          783 SGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTAT  826 (1078)
Q Consensus       783 v~~LLe~g~~~~ladln~~d~~g~tal~~a~----~~~v~~Lle~~a~  826 (1078)
                      +++|+++|++     ++.+|..|.||+++|.    .++++.|++.||+
T Consensus       208 v~~Ll~~gad-----in~~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         208 LELLLKAGAD-----PTARMYGGRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             HHHHHHTTCC-----TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             HHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             9999987899-----888799999999999987889999999976989

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.7e-22  Score=173.07  Aligned_cols=255  Identities=15%  Similarity=0.089  Sum_probs=205.0

Q ss_pred             CCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHH-----HHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf             99813789995799642011212002889997555788998127779-----8999999981999986776471319999
Q 001436          556 VGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-----HLRLERILSMRSSPQNHLSEGLCEKQKL  630 (1078)
Q Consensus       556 ~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl-----~~rivkLLl~~g~~~~~~~~~g~t~lhl  630 (1078)
                      .+.+.|+.|+.+|+  .++++  +++..|++++..+..+ ++||+|+     +.+++++|+..+.........+..+.+.
T Consensus         4 ~~~~~L~~Ai~~~~--~e~vk--~Ll~~G~din~~~~~~-g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~   78 (285)
T d1wdya_           4 EDNHLLIKAVQNED--VDLVQ--QLLEGGANVNFQEEEG-GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLL   78 (285)
T ss_dssp             HHHHHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTT-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred             CCCHHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC-CCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHH
T ss_conf             88489999998299--99999--9998798968248999-9799999998599988655202343222222111114677


Q ss_pred             HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCC----------CCCCCCHHH
Q ss_conf             9996151167899887512998876745310159999999719799999999689999855----------899993989
Q 001436          631 ISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCIL----------DDEGQGVLH  700 (1078)
Q Consensus       631 A~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~Gadin~~----------d~~G~TpLH  700 (1078)
                      +...+..  +....+++...+....+..  ..+.++.++..+ ...++..++....+++..          +..|.||||
T Consensus        79 ~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~l~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~  153 (285)
T d1wdya_          79 AAIAGSV--KLLKLFLSKGADVNECDFY--GFTAFMEAAVYG-KVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALM  153 (285)
T ss_dssp             HHHHTCH--HHHHHHHHTTCCTTCBCTT--CCBHHHHHHHTT-CHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHH
T ss_pred             HHHCCCC--CCCCHHHHHCCCCCCCCCC--CCCHHHHHHHHC-CHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHH
T ss_conf             7643875--3221134310221013568--986367888740-0125445443100113232101222220146856999


Q ss_pred             HHHHCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHC----CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             99982998889999967-999631389995088999982----9999999999759999988899999999999899999
Q 001436          701 LAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYC----GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLAS  775 (1078)
Q Consensus       701 lAa~~G~~~iv~~LL~~-Gadin~~D~~G~TpLH~Aa~~----G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa  775 (1078)
                      +|+..|+.+++++|+.. |++++..+..|.++++.+...    +...+++.|++.|++++.      ++..|.||||+|+
T Consensus       154 ~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~------~~~~g~t~L~~a~  227 (285)
T d1wdya_         154 DAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV------RGERGKTPLILAV  227 (285)
T ss_dssp             HHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSC------CCTTSCCHHHHHH
T ss_pred             HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC------CCCCCCCCCCHHH
T ss_conf             9998689999999984569894554678983322332234301799999999977999886------6899998241122


Q ss_pred             HCCCHHHHHHHHHC-CCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHCCCCCCCCC
Q ss_conf             66949999999982-797433357558899999468759----999999998147999999
Q 001436          776 SNGHKGISGFLAES-SLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDN  831 (1078)
Q Consensus       776 ~~G~~~iv~~LLe~-g~~~~ladln~~d~~g~tal~~a~----~~~v~~Lle~~a~~~~~~  831 (1078)
                      ..|+.+++++|++. |+     +++.+|..|.||+++|.    .++++.|+++||++++.|
T Consensus       228 ~~~~~~~v~~lL~~~g~-----din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d  283 (285)
T d1wdya_         228 EKKHLGLVQRLLEQEHI-----EINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             HTTCHHHHHHHHHSSSC-----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             HCCCHHHHHHHHHCCCC-----CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC
T ss_conf             13869999999980899-----986879999899999998597999999998798998601

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.91  E-value=2.2e-23  Score=181.94  Aligned_cols=206  Identities=17%  Similarity=0.123  Sum_probs=158.9

Q ss_pred             CHHHHHHHHCCCCCCCCC-CCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             237999998799766789-9999981378999579964201121200288999755578899812777989999999819
Q 001436          535 VEVPAEVLADGVLCCRIP-PHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMR  613 (1078)
Q Consensus       535 veVv~~LLq~Gv~rC~~p-~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl~~rivkLLl~~  613 (1078)
                      .+|+..||+.|++  .+. .+..|.||||+||..|+  .++++  +++..+++++..+..+  .++++            
T Consensus         2 ~~~v~~Ll~~g~d--in~~~d~~G~t~L~~A~~~g~--~e~v~--~Ll~~g~~~n~~~~~~--~~~~~------------   61 (209)
T d1ot8a_           2 AQVISDLLAQGAE--LNATMDKTGETSLHLAARFAR--ADAAK--RLLDAGADANSQDNTG--RTPLH------------   61 (209)
T ss_dssp             HHHHHHHHHHHHH--HHHHHHHHCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTS--CCHHH------------
T ss_pred             HHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHHCCCCCCCCCCC--CCCCC------------
T ss_conf             8999999987898--686769999889999998399--99999--9875022332222222--22222------------


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf             99986776471319999999615116789988751299887674531015999999971979999999968999985589
Q 001436          614 SSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDD  693 (1078)
Q Consensus       614 g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~Gadin~~d~  693 (1078)
                                      .+......  ................ .... +......+.......+.+.|...+++++..+.
T Consensus        62 ----------------~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~  121 (209)
T d1ot8a_          62 ----------------AAVAADAM--GVFQILLRNRATNLNA-RMHD-GTTPLILAARLAIEGMVEDLITADADINAADN  121 (209)
T ss_dssp             ----------------HHHHTTCH--HHHHHHHTCTTCCTTC-CCTT-CCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCT
T ss_pred             ----------------CCCCCCCC--CCCCCCCCCCCCCCCC-CCCC-CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf             ----------------22222222--2222222222222322-2222-33322222222101235555310146555577


Q ss_pred             CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             99939899998299888999996799963138999508899998299999999997599999888999999999998999
Q 001436          694 EGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDL  773 (1078)
Q Consensus       694 ~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhl  773 (1078)
                      .|.||||+++..|...++..++..+++++.+|..|+||||+||..|+.++|++||+.||+++.      +|..|.||||+
T Consensus       122 ~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~------~d~~g~Tpl~~  195 (209)
T d1ot8a_         122 SGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREI------TDHMDRLPRDV  195 (209)
T ss_dssp             TSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHH
T ss_pred             CCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCC------CCCCCCCHHHH
T ss_conf             999823000036863145320122223454434445521121032499999999987999988------68999999999


Q ss_pred             HHHCCCHHHHHHH
Q ss_conf             9966949999999
Q 001436          774 ASSNGHKGISGFL  786 (1078)
Q Consensus       774 Aa~~G~~~iv~~L  786 (1078)
                      |+.+|+.+++++|
T Consensus       196 A~~~~~~~iv~lL  208 (209)
T d1ot8a_         196 ASERLHHDIVRLL  208 (209)
T ss_dssp             HHHTTCHHHHHHH
T ss_pred             HHHCCCHHHHHHC
T ss_conf             9986879899643

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=9.2e-22  Score=170.20  Aligned_cols=222  Identities=14%  Similarity=0.060  Sum_probs=174.2

Q ss_pred             CHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCH
Q ss_conf             13789995799642011212002889997555788998127779899999998199998677647131999999961511
Q 001436          559 VPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLK  638 (1078)
Q Consensus       559 tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll  638 (1078)
                      +|||.||..|+  .++++.+. ...+..++..+                              ..|.+++|+|+..++  
T Consensus         2 ~pLh~A~~~g~--~~~v~~Ll-~~~~~~~~~~d------------------------------~~G~TpL~~A~~~g~--   46 (229)
T d1ixva_           2 YPLHQACMENE--FFKVQELL-HSKPSLLLQKD------------------------------QDGRIPLHWSVSFQA--   46 (229)
T ss_dssp             CHHHHHHHHTC--HHHHHHHH-HHCGGGTTCCC------------------------------TTSCCHHHHHHHTTC--
T ss_pred             HHHHHHHHCCC--HHHHHHHH-HCCCCCCCCCC------------------------------CCCCCHHHHHHHCCC--
T ss_conf             76999998689--99999999-80998665659------------------------------999989999998699--


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCC-HHHHHHHHHCCHHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCCHHHHHHHH
Q ss_conf             678998875129988767453101-5999999971979999999968999--9855899993989999829988899999
Q 001436          639 EEEESYQMVEANPEKNLSQHVEKY-QILQKIMKEKLYSWLLRKVCEDGKG--PCILDDEGQGVLHLAASLGYDWAIKPTV  715 (1078)
Q Consensus       639 ~e~~~~LL~~~ad~n~~s~~~~~~-t~L~~aa~~~~~~~lv~~Lle~Gad--in~~d~~G~TpLHlAa~~G~~~iv~~LL  715 (1078)
                      .++++.|++.+++++..+..+..+ ++++.+.. .....+++.++..+..  ....+..+.|+|+.++..++.+++..|+
T Consensus        47 ~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~  125 (229)
T d1ixva_          47 HEITSFLLSKMENVNLDDYPDDSGWTPFHIACS-VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLI  125 (229)
T ss_dssp             HHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHH-HTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             654413544301233322232222222221111-2332333332222222222223223344332212320034322221


Q ss_pred             HCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCC
Q ss_conf             679996313899950889999829999999999759-9999888999999999998999996694999999998-27974
Q 001436          716 TAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG-AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE-SSLTS  793 (1078)
Q Consensus       716 ~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~G-Advna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe-~g~~~  793 (1078)
                      ..|.+.+.+|..|+||||+|+..|+.++++.|+..| .+++.      +|..|.||||+|+..|+.+++++|++ .|+  
T Consensus       126 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~------~d~~g~TpLh~A~~~~~~~~v~~Ll~~~ga--  197 (229)
T d1ixva_         126 ENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW------QDKQGWTPLFHALAEGHGDAAVLLVEKYGA--  197 (229)
T ss_dssp             HTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHCC--
T ss_pred             HHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC------CCCCCCCCHHHHCCCCCHHHHHHHHHHCCC--
T ss_conf             100232124788997350232124533233332222222223------566667810221012519999999996599--


Q ss_pred             CCCCCCCCCCCCCCHHHHHH-HHHHHHHHHCCCCC
Q ss_conf             33357558899999468759-99999999814799
Q 001436          794 LLLSLKMNDSADDGALEDSI-AKAVQTVSEKTATP  827 (1078)
Q Consensus       794 ~ladln~~d~~g~tal~~a~-~~~v~~Lle~~a~~  827 (1078)
                         +++.+|..|.||++++. .++++.|++.|+++
T Consensus       198 ---d~~~~d~~g~t~l~~A~~~~~~~~Ll~~g~d~  229 (229)
T d1ixva_         198 ---EYDLVDNKGAKAEDVALNEQVKKFFLNNVVDA  229 (229)
T ss_dssp             ---CSCCCCTTSCCTGGGCSCHHHHHHHHHHCCCC
T ss_pred             ---CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf             ---98885899999999984678999999769999

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.90  E-value=2e-23  Score=182.12  Aligned_cols=219  Identities=15%  Similarity=0.109  Sum_probs=151.6

Q ss_pred             CCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf             98137899957996420112120028899975557889981277798999999981999986776471319999999615
Q 001436          557 GRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQ  636 (1078)
Q Consensus       557 G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~Lhl~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~  636 (1078)
                      |.|+|+.||..|+  .++++  +++..|+++|..|..|  .||||+                            |...++
T Consensus        40 ~~t~l~~A~~~G~--~~~v~--~Ll~~Gadvn~~d~~G--~T~L~~----------------------------A~~~g~   85 (291)
T d1s70b_          40 DGAVFLAACSSGD--TEEVL--RLLERGADINYANVDG--LTALHQ----------------------------ACIDDN   85 (291)
T ss_dssp             HHHHHHHHHHHTC--HHHHH--HHHHHCCCTTCBCTTC--CBHHHH----------------------------HHHTTC
T ss_pred             CCHHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHH----------------------------HHHCCC
T ss_conf             9669999998588--99999--9998799988668999--969999----------------------------986197


Q ss_pred             CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-
Q ss_conf             1167899887512998876745310159999999719799999999689999855899993989999829988899999-
Q 001436          637 LKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTV-  715 (1078)
Q Consensus       637 ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL-  715 (1078)
                        .+.+++|++.+.+.......+  .++++.++..+ ...+++.|++.|+..+..+..|.+++++|+..++...+..++ 
T Consensus        86 --~eiv~~Ll~~~~~~~~~~~~~--~~~L~~a~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  160 (291)
T d1s70b_          86 --VDMVKFLVENGANINQPDNEG--WIPLHAAASCG-YLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN  160 (291)
T ss_dssp             --HHHHHHHHHTTCCTTCCCTTS--CCHHHHHHHHT-CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHH
T ss_pred             --CEEEEEECCCCCCCCCCCCCC--CCCCCCCCCCC-CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC
T ss_conf             --312110012223333322232--33333332222-1100110124676422222467642222111222000100000


Q ss_pred             --------------------------HCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             --------------------------679996313899950889999829999999999759999988899999999999
Q 001436          716 --------------------------TAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRT  769 (1078)
Q Consensus       716 --------------------------~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~T  769 (1078)
                                                ....+....+..|.||||+|+..|+.++++.|+..|++++.      ++..|.|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~------~~~~g~T  234 (291)
T d1s70b_         161 RQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNI------KDYDGWT  234 (291)
T ss_dssp             HHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC------CCTTCCC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCEECCCC------CCCCCCC
T ss_conf             2465321100001333221100110123211002467898730488876995441013441011242------1257988


Q ss_pred             HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             89999966949999999982797433357558899999468759999999998147
Q 001436          770 PSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTA  825 (1078)
Q Consensus       770 PLhlAa~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~~~~v~~Lle~~a  825 (1078)
                      |||+|+..|+.+++++|+++|++     ++.+|..|.||+++|..+++..|.+...
T Consensus       235 pL~~A~~~g~~~iv~lLl~~Gad-----v~~~d~~G~TaL~~A~e~~~~~L~~~~~  285 (291)
T d1s70b_         235 PLHAAAHWGKEEACRILVENLCD-----MEAVNKVGQTAFDVADEDILGYLEELQK  285 (291)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCTTTSCCSGGGHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999985989999999987999-----9886899999999999989999999863

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.88  E-value=1.6e-21  Score=168.49  Aligned_cols=216  Identities=13%  Similarity=0.097  Sum_probs=130.1

Q ss_pred             CHHHHHCCCCHHHHHH--------HHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             2065623992379999--------98799766789999998137899957996420112120028899975557889981
Q 001436          526 CKWSCMFAEVEVPAEV--------LADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSST  597 (1078)
Q Consensus       526 ~~~Ac~fG~veVv~~L--------Lq~Gv~rC~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~  597 (1078)
                      ++|||..|+.+++..|        +..|++  ++..+..|.||||+||.+|+  .++++  +++..|++++..+..|  .
T Consensus        37 Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gad--vn~~d~~G~TpLh~A~~~g~--~~iv~--~Ll~~Gad~n~~~~~g--~  108 (277)
T d2fo1e1          37 LHWIASNSSAEKSEDLIVHEAKECIAAGAD--VNAMDCDENTPLMLAVLARR--RRLVA--YLMKAGADPTIYNKSE--R  108 (277)
T ss_dssp             HHHHHCTTCCSCCTTHHHHHHHHHHHTCCC--TTCCCTTSCCHHHHHHHHTC--HHHHH--HHHHTTCCSCCCCTTC--C
T ss_pred             HHHHHHCCCHHHHHHHHHCCHHHHHHCCCC--CCCCCCCCCEEECCCCCCCC--CCCCC--CCCCCCCCCCCCCCCC--C
T ss_conf             999998689999999996523679876997--64547888851003433333--33333--3322322233222222--2


Q ss_pred             CHHHH-----HHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHHCCCH-HHHHHHHHHHCCCCCC-----CC-CCCCCC
Q ss_conf             27779-----899999998199---998677647131999999961511-6789988751299887-----67-453101
Q 001436          598 SESFL-----HLRLERILSMRS---SPQNHLSEGLCEKQKLISKIIQLK-EEEESYQMVEANPEKN-----LS-QHVEKY  662 (1078)
Q Consensus       598 t~Lhl-----~~rivkLLl~~g---~~~~~~~~~g~t~lhlA~k~~~ll-~e~~~~LL~~~ad~n~-----~s-~~~~~~  662 (1078)
                      +++++     +..+...+....   ......+....+..+.+....... ......+.........     .. ......
T Consensus       109 t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  188 (277)
T d2fo1e1         109 SALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGR  188 (277)
T ss_dssp             CHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCC
T ss_pred             CCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             22210011000012344431145422222222211036788875034332222210011233222222345554466898


Q ss_pred             HHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHH
Q ss_conf             59999999719799999999689999855899993989999829988899999679996313899950889999829999
Q 001436          663 QILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK  742 (1078)
Q Consensus       663 t~L~~aa~~~~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~e  742 (1078)
                      ++++.++..+....+...+...+.+++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus       189 t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~  268 (277)
T d2fo1e1         189 TALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHN  268 (277)
T ss_dssp             CTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHH
T ss_conf             70000122333222223222345433346899998999999859899999999876999886999999999999859899


Q ss_pred             HHHHHHH
Q ss_conf             9999997
Q 001436          743 TVAVLLS  749 (1078)
Q Consensus       743 iV~~LL~  749 (1078)
                      +|++|++
T Consensus       269 iv~lL~~  275 (277)
T d2fo1e1         269 IVDIFDR  275 (277)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHH
T ss_conf             9999997

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.6e-21  Score=165.90  Aligned_cols=216  Identities=17%  Similarity=0.076  Sum_probs=136.3

Q ss_pred             CCCCHHHHHHHCCCCCCCHHHHH--HCCCCCCCCCCCCCCCCCCCHHHH-----HHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf             99813789995799642011212--002889997555788998127779-----89999999819999867764713199
Q 001436          556 VGRVPFYITCSNRLACSEVREFD--YIVGSVKDADISDIYGSSTSESFL-----HLRLERILSMRSSPQNHLSEGLCEKQ  628 (1078)
Q Consensus       556 ~G~tPLhvAa~ng~~cseVv~fe--yl~~~~adin~~d~~g~~~t~Lhl-----~~rivkLLl~~g~~~~~~~~~g~t~l  628 (1078)
                      +|.||||+||..++  .++++++  ++...+++++..+..|  +||||+     +.+++++|+..++..+.....+....
T Consensus         2 dG~TpLh~A~~~g~--~~~v~~Ll~~~~~~g~~in~~d~~g--~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~   77 (228)
T d1k1aa_           2 DGDTPLHIAVVQGN--LPAVHRLVNLFQQGGRELDIYNNLR--QTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAA   77 (228)
T ss_dssp             TTCCHHHHHHHTTC--HHHHHHHHHHHHHTTCCSCCCCTTS--CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred             CCCCHHHHHHHCCC--HHHHHHHHHHHHHCCCCCCCCCCCC--CCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             88429999998399--9999999998997799777668999--9624100013553333333222223343333222333


Q ss_pred             HHHHHHCCCHHHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHC
Q ss_conf             99999615116789988751299887--6745310159999999719799999999689999-85589999398999982
Q 001436          629 KLISKIIQLKEEEESYQMVEANPEKN--LSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGP-CILDDEGQGVLHLAASL  705 (1078)
Q Consensus       629 hlA~k~~~ll~e~~~~LL~~~ad~n~--~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~Gadi-n~~d~~G~TpLHlAa~~  705 (1078)
                      +.+......  ..+..+.........  .........+++...... .......|.....+. ......|.++||.|+..
T Consensus        78 ~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~  154 (228)
T d1k1aa_          78 HLACEHRSP--TCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE-CQETVQLLLERGADIDAVDIKSGRSPLIHAVEN  154 (228)
T ss_dssp             HHHHHTTCH--HHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHT-CHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHT
T ss_pred             CCCCCCCCC--CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             222223452--10023442045432232233332222222222222-100134430012332222100025578898875


Q ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf             9988899999679996313899950889999829999999999759999988899999999999899999669499999
Q 001436          706 GYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISG  784 (1078)
Q Consensus       706 G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~  784 (1078)
                      +...+++.++..|.+++.+|..|.||||+|+..|+.+++++|+++|++++..      |..|.||||+|+.+|+.++++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~------d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         155 NSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLK------NCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCC------CTTSCCTTTTCSSHHHHHHHT
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC------CCCCCCHHHHHHHCCCCCCCC
T ss_conf             1002344322202232221236861689999858799999999878999887------899999999998687703538

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=6e-21  Score=164.29  Aligned_cols=194  Identities=17%  Similarity=0.108  Sum_probs=137.5

Q ss_pred             CCCCHHHHHHHCCCCCCCHHHH--HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             9981378999579964201121--20028899975557889981277798999999981999986776471319999999
Q 001436          556 VGRVPFYITCSNRLACSEVREF--DYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISK  633 (1078)
Q Consensus       556 ~G~tPLhvAa~ng~~cseVv~f--eyl~~~~adin~~d~~g~~~t~Lhl~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k  633 (1078)
                      +|.||||+|+..+.  .+++..  .++...++++|..+..|                              .||+|+|+.
T Consensus         1 dG~t~Lh~A~~~g~--~~~~~~li~~~~~~~~~in~~d~~g------------------------------~TpLh~A~~   48 (221)
T d1iknd_           1 DGDSFLHLAIIHEE--KALTMEVIRQVKGDLAFLNFQNNLQ------------------------------QTPLHLAVI   48 (221)
T ss_dssp             CCCCTTHHHHHTTC--SSSSSCCCC-----CCCCCCCCTTC------------------------------CCHHHHHHH
T ss_pred             CCCHHHHHHHHCCC--HHHHHHHHHHHHHCCCCCCCCCCCC------------------------------CCCCCCCCC
T ss_conf             98729999998589--9999999999986799753678999------------------------------954634334


Q ss_pred             HCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCC------CCCCCCCCCHHHHHHHCCC
Q ss_conf             6151167899887512998876745310159999999719799999999689999------8558999939899998299
Q 001436          634 IIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGP------CILDDEGQGVLHLAASLGY  707 (1078)
Q Consensus       634 ~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~Gadi------n~~d~~G~TpLHlAa~~G~  707 (1078)
                      .++  .+++.+|++.+++.+..+..+  .++++.++..+ ...+++.++..+...      ......|.||||.|+..|+
T Consensus        49 ~~~--~~iv~~L~~~g~d~~~~d~~g--~t~l~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~  123 (221)
T d1iknd_          49 TNQ--PEIAEALLGAGCDPELRDFRG--NTPLHLACEQG-CLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY  123 (221)
T ss_dssp             TTC--HHHHHCCCSCCCCSCCCCTTC--CCHHHHHHHHT-CHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTC
T ss_pred             CCC--CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCC-CCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
T ss_conf             332--223333222222222232232--22222233322-2221110111013233322222223343213567755598


Q ss_pred             HHHHHHHHHCCCCCCCCC-CCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             888999996799963138-9995088999982999999999975999998889999999999989999966949999999
Q 001436          708 DWAIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL  786 (1078)
Q Consensus       708 ~~iv~~LL~~Gadin~~D-~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~L  786 (1078)
                      ...+.+|+..|+.++..+ .+|+||||+|+..|+.+++++|+++|+++++.      |..|.||||+|+..++.+++++|
T Consensus       124 ~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~------~~~G~tpl~~A~~~~~~~~~~~l  197 (221)
T d1iknd_         124 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV------TYQGYSPYQLTWGRPSTRIQQQL  197 (221)
T ss_dssp             HHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCC------CTTCCCGGGGCTTSSCHHHHHHH
T ss_pred             HHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC------CCCCCCHHHHHHHCCCHHHHHHH
T ss_conf             223010013686311224467778431111222489888898638864566------99998999999987889999999


Q ss_pred             HHCCCC
Q ss_conf             982797
Q 001436          787 AESSLT  792 (1078)
Q Consensus       787 Le~g~~  792 (1078)
                      ++....
T Consensus       198 ~~~~~~  203 (221)
T d1iknd_         198 GQLTLE  203 (221)
T ss_dssp             HTTSCG
T ss_pred             HHCCCC
T ss_conf             982873

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.4e-19  Score=152.71  Aligned_cols=210  Identities=11%  Similarity=0.022  Sum_probs=147.1

Q ss_pred             CCCHHHHHCCCCHHHHHHHH----CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCH
Q ss_conf             33206562399237999998----79976678999999813789995799642011212002889997555788998127
Q 001436          524 AKCKWSCMFAEVEVPAEVLA----DGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSE  599 (1078)
Q Consensus       524 ~~~~~Ac~fG~veVv~~LLq----~Gv~rC~~p~~~~G~tPLhvAa~ng~~cseVv~feyl~~~~adin~~d~~g~~~t~  599 (1078)
                      +.+++||..|+.+++..|+.    .|++  ....+..|.||||+||..++  .++++  +++..+++++.....+  .++
T Consensus         5 TpLh~A~~~g~~~~v~~Ll~~~~~~g~~--in~~d~~g~TpL~~A~~~~~--~~iv~--~Ll~~ga~~~~~~~~~--~~~   76 (228)
T d1k1aa_           5 TPLHIAVVQGNLPAVHRLVNLFQQGGRE--LDIYNNLRQTPLHLAVITTL--PSVVR--LLVTAGASPMALDRHG--QTA   76 (228)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHHHHHTTCC--SCCCCTTSCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTS--CCH
T ss_pred             CHHHHHHHCCCHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCEEHHCCCC--CCCCC--CCCCCCCCCCCCCCCC--CCC
T ss_conf             2999999839999999999989977997--77668999962410001355--33333--3322222334333322--233


Q ss_pred             HHH-----HHHHHHHHHHCC----CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             779-----899999998199----99867764713199999996151167899887512998876745310159999999
Q 001436          600 SFL-----HLRLERILSMRS----SPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMK  670 (1078)
Q Consensus       600 Lhl-----~~rivkLLl~~g----~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~  670 (1078)
                      ++.     ...+.+.+....    ............+++.......  ......+.....+..... .....++++.++.
T Consensus        77 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~l~~~~~~~~~~~-~~~~~~~l~~a~~  153 (228)
T d1k1aa_          77 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC--QETVQLLLERGADIDAVD-IKSGRSPLIHAVE  153 (228)
T ss_dssp             HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTC--HHHHHHHHHTTCCTTCCC-TTTCCCHHHHHHH
T ss_pred             CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CHHHHHHHCCCCCCCCCC-CCCHHHHHHHHHH
T ss_conf             3222223452100234420454322322333322222222222221--001344300123322221-0002557889887


Q ss_pred             HCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHH
Q ss_conf             719799999999689999855899993989999829988899999679996313899950889999829999999
Q 001436          671 EKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVA  745 (1078)
Q Consensus       671 ~~~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~  745 (1078)
                      . ....+.+.+++.|.+++.+|..|.||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+.+|+.++|+
T Consensus       154 ~-~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         154 N-NSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             T-TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred             H-HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
T ss_conf             5-1002344322202232221236861689999858799999999878999887899999999998687703538

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.83  E-value=4.9e-19  Score=150.53  Aligned_cols=204  Identities=18%  Similarity=0.141  Sum_probs=164.0

Q ss_pred             HHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH
Q ss_conf             9999999819999867-764713199999996151167899887512998876745310159999999719799999999
Q 001436          604 LRLERILSMRSSPQNH-LSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVC  682 (1078)
Q Consensus       604 ~rivkLLl~~g~~~~~-~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Ll  682 (1078)
                      .+++++|+..|.+.+. .+..|.+++|+|+..++  .+.++.|+..++.++..+..+  .++++..+.............
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~--~e~v~~Ll~~g~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~~~   77 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKTGETSLHLAARFAR--ADAAKRLLDAGADANSQDNTG--RTPLHAAVAADAMGVFQILLR   77 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTC--HHHHHHHHHTTCCTTCCCTTS--CCHHHHHHHTTCHHHHHHHHT
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCC--HHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCC
T ss_conf             8999999987898686769999889999998399--999999875022332222222--222222222222222222222


Q ss_pred             HCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             68999985589999398999982998889999967999631389995088999982999999999975999998889999
Q 001436          683 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSP  762 (1078)
Q Consensus       683 e~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~  762 (1078)
                      ............|.++.+.+.........+.|+..+++++.++..|+|||++++..|...++..|+..+++++..     
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~-----  152 (209)
T d1ot8a_          78 NRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQ-----  152 (209)
T ss_dssp             CTTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCC-----
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCC-----
T ss_conf             222223222222333222222221012355553101465555779998230000368631453201222234544-----


Q ss_pred             CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             999999989999966949999999982797433357558899999468759999999998
Q 001436          763 EFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSE  822 (1078)
Q Consensus       763 ~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~~~~v~~Lle  822 (1078)
                       |..|.||||+|+..|+.+++++|++.|++     ++.+|..|.||+++|...+...+++
T Consensus       153 -d~~g~TpL~~A~~~g~~~~v~~Ll~~gad-----~n~~d~~g~Tpl~~A~~~~~~~iv~  206 (209)
T d1ot8a_         153 -DDKDETPLFLAAREGSYEASKALLDNFAN-----REITDHMDRLPRDVASERLHHDIVR  206 (209)
T ss_dssp             -CTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             -CCCCCCCCCHHCCCCHHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCCHHHHH
T ss_conf             -34445521121032499999999987999-----9886899999999999868798996

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.7e-19  Score=153.80  Aligned_cols=188  Identities=16%  Similarity=0.058  Sum_probs=79.6

Q ss_pred             CCCHHHHHHHHCCCH--HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf             131999999961511--678998875129988767453101599999997197999999996899998558999939899
Q 001436          624 LCEKQKLISKIIQLK--EEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHL  701 (1078)
Q Consensus       624 g~t~lhlA~k~~~ll--~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~Gadin~~d~~G~TpLHl  701 (1078)
                      |.+++|+|...+...  .+.++.+...+++++..+..+  .|+||.++..+ ...++++|++.|++++.+|..|.||||+
T Consensus         2 G~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g--~TpLh~A~~~~-~~~iv~~L~~~g~d~~~~d~~g~t~l~~   78 (221)
T d1iknd_           2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQ--QTPLHLAVITN-QPEIAEALLGAGCDPELRDFRGNTPLHL   78 (221)
T ss_dssp             CCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTC--CCHHHHHHHTT-CHHHHHCCCSCCCCSCCCCTTCCCHHHH
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             87299999985899999999999986799753678999--95463433433-2223333222222222232232222222


Q ss_pred             HHHCCCHHHHHHHHHCCCCC------CCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             99829988899999679996------313899950889999829999999999759999988899999999999899999
Q 001436          702 AASLGYDWAIKPTVTAGVSI------NFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLAS  775 (1078)
Q Consensus       702 Aa~~G~~~iv~~LL~~Gadi------n~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa  775 (1078)
                      ++..|+..+++.|+..+...      ......|.||||+|+..|+.+++.+|+..|+.++..++     ..|.||||+|+
T Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-----~~G~T~L~~A~  153 (221)
T d1iknd_          79 ACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEP-----CNGRTALHLAV  153 (221)
T ss_dssp             HHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-----TTCCCHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHEEEECCCCCCCCCCCC-----CCCCCCCCCCC
T ss_conf             3332222211101110132333222222233432135677555982230100136863112244-----67778431111


Q ss_pred             HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHCC
Q ss_conf             66949999999982797433357558899999468759----99999999814
Q 001436          776 SNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKT  824 (1078)
Q Consensus       776 ~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~----~~~v~~Lle~~  824 (1078)
                      ..|+.+++++|+++|++     ++.+|..|.||++++.    .+.++.|.+..
T Consensus       154 ~~g~~~~v~~Ll~~gad-----~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~  201 (221)
T d1iknd_         154 DLQNPDLVSLLLKCGAD-----VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLT  201 (221)
T ss_dssp             HTTCHHHHHHHHTTTCC-----SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTS
T ss_pred             CCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
T ss_conf             22248988889863886-----4566999989999999878899999999828

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.9e-18  Score=144.91  Aligned_cols=151  Identities=20%  Similarity=0.196  Sum_probs=117.3

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             19999999615116789988751-29988767453101599999997197999999996899998558999939899998
Q 001436          626 EKQKLISKIIQLKEEEESYQMVE-ANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS  704 (1078)
Q Consensus       626 t~lhlA~k~~~ll~e~~~~LL~~-~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~  704 (1078)
                      +.++.|+..+++  +.+++|+.. +.+.+..+..+  .++++.++ .+ ...+++.|++.+.+++..+..|.+||++++.
T Consensus         4 ~~L~~Aa~~g~~--~~vk~lL~~~~~~~n~~d~~g--~t~L~~A~-~~-~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~   77 (156)
T d1bd8a_           4 DRLSGAAARGDV--QEVRRLLHRELVHPDALNRFG--KTALQVMM-FG-STAIALELLKQGASPNVQDTSGTSPVHDAAR   77 (156)
T ss_dssp             HHHHHHHHHTCH--HHHHHHHHTTCCCTTCCCTTS--CCHHHHSC-TT-CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             HHHHHHHHCCCH--HHHHHHHHHCCCCCCCCCCCC--CCCCCCCC-CC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             799999995899--999999995899988648999--84133432-22-2222222222222222222222222222222


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf             29988899999679996313899950889999829999999999759999988899999999999899999669499999
Q 001436          705 LGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISG  784 (1078)
Q Consensus       705 ~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~  784 (1078)
                      .++..+++.+++.|++++.+|..|+||||+||..|+.+++++|+ .|++++.      +|..|.||||+|+..|+.++++
T Consensus        78 ~~~~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~------~d~~G~TpL~~A~~~g~~~iv~  150 (156)
T d1bd8a_          78 TGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHR------RDARGLTPLELALQRGAQDLVD  150 (156)
T ss_dssp             TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTC------CCTTSCCHHHHHHHSCCHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCC------CCCCCCCHHHHHHHCCCHHHHH
T ss_conf             22222222222221221123677872221222233222211112-2256646------6899999999999859899999


Q ss_pred             HHHHC
Q ss_conf             99982
Q 001436          785 FLAES  789 (1078)
Q Consensus       785 ~LLe~  789 (1078)
                      +|+++
T Consensus       151 ~Ll~h  155 (156)
T d1bd8a_         151 ILQGH  155 (156)
T ss_dssp             HHHTT
T ss_pred             HHHHH
T ss_conf             99966

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=8.5e-18  Score=141.60  Aligned_cols=153  Identities=21%  Similarity=0.194  Sum_probs=105.4

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf             19999999615116789988751299887674531015999999971979999999968999985589999398999982
Q 001436          626 EKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASL  705 (1078)
Q Consensus       626 t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~~  705 (1078)
                      +++|.|+..+++  +.++.|++.+++++..+..+  .+++|.+ . .++..++++|++.|++++..+..|.++|+.++..
T Consensus         3 ~~Lh~Aa~~g~~--~~v~~Ll~~g~d~n~~d~~g--~TpL~~A-~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~   76 (156)
T d1ihba_           3 NELASAAARGDL--EQLTSLLQNNVNVNAQNGFG--RTALQVM-K-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARA   76 (156)
T ss_dssp             HHHHHHHHHTCH--HHHHHHTTSCCCTTCCCTTS--CCHHHHC-C-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             HHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCC--CCCCCCC-C-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             899999986799--99999998787967467744--5321222-2-2222222222222222212123575322233222


Q ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf             99888999996799963138999508899998299999999997599-99988899999999999899999669499999
Q 001436          706 GYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA-APGLLTDPSPEFPLSRTPSDLASSNGHKGISG  784 (1078)
Q Consensus       706 G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GA-dvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~  784 (1078)
                      ++...+..|+..+.+++..|..|.+|||+|+..++.++++.|+.+|+ +++.      +|..|.||||+|+..|+.++++
T Consensus        77 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~------~d~~g~TpL~~A~~~~~~~iv~  150 (156)
T d1ihba_          77 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGH------RNHKGDTACDLARLYGRNEVVS  150 (156)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTC------CCTTSCCHHHHHHHTTCHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHH
T ss_conf             2222222221122222235644321122333322122222222122011224------5899989999999839899999


Q ss_pred             HHHHCC
Q ss_conf             999827
Q 001436          785 FLAESS  790 (1078)
Q Consensus       785 ~LLe~g  790 (1078)
                      +|+++|
T Consensus       151 ~Ll~~G  156 (156)
T d1ihba_         151 LMQANG  156 (156)
T ss_dssp             HHHHTC
T ss_pred             HHHHCC
T ss_conf             999667

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=8.7e-18  Score=141.52  Aligned_cols=151  Identities=19%  Similarity=0.203  Sum_probs=133.8

Q ss_pred             CHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCH
Q ss_conf             15999999971979999999968999985589999398999982998889999967999631389995088999982999
Q 001436          662 YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE  741 (1078)
Q Consensus       662 ~t~L~~aa~~~~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~  741 (1078)
                      +++||.|+..+ ...+++.|++.|++++.+|..|.||||+|+ .|+.+++++|+..|++++.++..|.++|++++..++.
T Consensus         2 ~~~Lh~Aa~~g-~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~   79 (156)
T d1ihba_           2 GNELASAAARG-DLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL   79 (156)
T ss_dssp             HHHHHHHHHHT-CHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             HHHHHHHHHCC-CHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             38999999867-999999999878796746774453212222-2222222222222222212123575322233222222


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHH
Q ss_conf             999999975999998889999999999989999966949999999982797433357558899999468759----9999
Q 001436          742 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAV  817 (1078)
Q Consensus       742 eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~----~~~v  817 (1078)
                      .++..|+..+.+++.      .+..|.+|+++|+..++.+++++|++++.    .+++.+|..|.||++++.    .+++
T Consensus        80 ~~~~~l~~~~~~~~~------~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~----~~~~~~d~~g~TpL~~A~~~~~~~iv  149 (156)
T d1ihba_          80 DTLQTLLEFQADVNI------EDNEGNLPLHLAAKEGHLRVVEFLVKHTA----SNVGHRNHKGDTACDLARLYGRNEVV  149 (156)
T ss_dssp             HHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHSC----CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             CCCCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCHHHHHHHCCCHHHH
T ss_conf             222222112222223------56443211223333221222222221220----11224589998999999983989999


Q ss_pred             HHHHHCC
Q ss_conf             9999814
Q 001436          818 QTVSEKT  824 (1078)
Q Consensus       818 ~~Lle~~  824 (1078)
                      +.|+++|
T Consensus       150 ~~Ll~~G  156 (156)
T d1ihba_         150 SLMQANG  156 (156)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHCC
T ss_conf             9999667

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.1e-18  Score=148.09  Aligned_cols=122  Identities=29%  Similarity=0.320  Sum_probs=107.5

Q ss_pred             HHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHH
Q ss_conf             59999999719799999999689999855899993989999829988899999679996313899950889999829999
Q 001436          663 QILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK  742 (1078)
Q Consensus       663 t~L~~aa~~~~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~e  742 (1078)
                      ++|+.++. .++..+++.|++.|++++.+|..|.||||+|+..|+..++++|++.|++++.+|.+|+||||+|+.+|+.+
T Consensus         3 ~lL~~A~~-~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~   81 (130)
T d1ycsb1           3 ALLLDSSL-EGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQ   81 (130)
T ss_dssp             HHHHHHHH-HTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred             HHHHHHHH-CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf             99999999-39999999999869975610021111112222222222222222222222221236764222321026889


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH--HHCCCHHHHHHHHHCC
Q ss_conf             99999975999998889999999999989999--9669499999999827
Q 001436          743 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLA--SSNGHKGISGFLAESS  790 (1078)
Q Consensus       743 iV~~LL~~GAdvna~tdp~~~d~~G~TPLhlA--a~~G~~~iv~~LLe~g  790 (1078)
                      +|++|+++|++++..+.     ..|.||++++  +.+|+.+++++|++..
T Consensus        82 ~v~~Ll~~ga~v~~~~~-----~~~~~~~~~~~a~~~g~~eiv~~L~~~~  126 (130)
T d1ycsb1          82 VCKFLVESGAAVFAMTY-----SDMQTAADKCEEMEEGYTQCSQFLYGVQ  126 (130)
T ss_dssp             HHHHHHHTTCCTTCCCS-----SSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCCC-----CCCCCHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf             99999986998664668-----9998899999999868299999998678

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.78  E-value=3.3e-21  Score=166.23  Aligned_cols=128  Identities=15%  Similarity=0.036  Sum_probs=83.1

Q ss_pred             HHHHHHHHHCCHHHH---HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC--CCCCHHHHHHHH
Q ss_conf             599999997197999---999996899998558999939899998299888999996799963138--999508899998
Q 001436          663 QILQKIMKEKLYSWL---LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD--LSGWTALHWAAY  737 (1078)
Q Consensus       663 t~L~~aa~~~~~~~l---v~~Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D--~~G~TpLH~Aa~  737 (1078)
                      ++++.++. .|+..+   ++.|++.|++++.+|..|.||||+||..||.++|++|++.|++++..+  .+|+||||+||.
T Consensus        92 t~L~~Aa~-~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~Aa~  170 (346)
T d2ajaa1          92 VICFVAAI-TGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAE  170 (346)
T ss_dssp             HHHHHHHH-HCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHH
T ss_pred             CHHHHHHH-HCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             49999998-59988999999998389855336899997999999878999999999869970214555699874389988


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Q ss_conf             299999999997599999888999999999998999996694999999998279743
Q 001436          738 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSL  794 (1078)
Q Consensus       738 ~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~  794 (1078)
                      +||.++|++|++.|++....+   ..+..+.||++.|+.+||.+++++|++.|++..
T Consensus       171 ~g~~~iv~~Ll~~~~~~~~~~---~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~  224 (346)
T d2ajaa1         171 NGHLHVLNRLCELAPTEATAM---IQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA  224 (346)
T ss_dssp             TTCHHHHHHHHHSCGGGHHHH---HHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCC---CCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCC
T ss_conf             756799999997699420120---016899631157762488999999996899866

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.1e-17  Score=138.71  Aligned_cols=147  Identities=24%  Similarity=0.232  Sum_probs=125.5

Q ss_pred             CHHHHHHHHHCCHHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf             1599999997197999999996-899998558999939899998299888999996799963138999508899998299
Q 001436          662 YQILQKIMKEKLYSWLLRKVCE-DGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGR  740 (1078)
Q Consensus       662 ~t~L~~aa~~~~~~~lv~~Lle-~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~  740 (1078)
                      +.+|+.|+..+.. .+++.|++ .+++++.+|..|.||||+|+ .|+.++++.|+..+++++..+..|.+||+.++..++
T Consensus         3 g~~L~~Aa~~g~~-~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~   80 (156)
T d1bd8a_           3 GDRLSGAAARGDV-QEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF   80 (156)
T ss_dssp             HHHHHHHHHHTCH-HHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CHHHHHHHHCCCH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             1799999995899-99999999589998864899984133432-222222222222222222222222222222222222


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH----HH
Q ss_conf             99999999759999988899999999999899999669499999999827974333575588999994687599----99
Q 001436          741 EKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA----KA  816 (1078)
Q Consensus       741 ~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~~----~~  816 (1078)
                      .++++.++++|++++..      |..|.||||+|+..|+.+++++|+ .|+     +++.+|..|.||+++|..    ++
T Consensus        81 ~~~~~~~l~~~~~~n~~------~~~~~t~L~~A~~~~~~~i~~~L~-~~~-----~~~~~d~~G~TpL~~A~~~g~~~i  148 (156)
T d1bd8a_          81 LDTLKVLVEHGADVNVP------DGTGALPIHLAVQEGHTAVVSFLA-AES-----DLHRRDARGLTPLELALQRGAQDL  148 (156)
T ss_dssp             HHHHHHHHHTTCCSCCC------CTTSCCHHHHHHHHTCHHHHHHHH-TTS-----CTTCCCTTSCCHHHHHHHSCCHHH
T ss_pred             CCCCCCCCCCCCCCCCC------CCCCCEEECCCCCCCCCCCCCCCC-CCC-----CCCCCCCCCCCHHHHHHHCCCHHH
T ss_conf             22222222221221123------677872221222233222211112-225-----664668999999999998598999


Q ss_pred             HHHHHH
Q ss_conf             999998
Q 001436          817 VQTVSE  822 (1078)
Q Consensus       817 v~~Lle  822 (1078)
                      ++.|++
T Consensus       149 v~~Ll~  154 (156)
T d1bd8a_         149 VDILQG  154 (156)
T ss_dssp             HHHHHT
T ss_pred             HHHHHH
T ss_conf             999996

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.77  E-value=2.9e-18  Score=144.93  Aligned_cols=92  Identities=20%  Similarity=0.147  Sum_probs=53.1

Q ss_pred             HHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHH-HH--CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             9999968999-985589999398999982998889999-96--7999631389995088999982999999999975999
Q 001436          678 LRKVCEDGKG-PCILDDEGQGVLHLAASLGYDWAIKPT-VT--AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAA  753 (1078)
Q Consensus       678 v~~Lle~Gad-in~~d~~G~TpLHlAa~~G~~~iv~~L-L~--~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd  753 (1078)
                      +.++...+.. .......+.++++.+........+..+ +.  .+..+|.+|..|+||||+||..|+.++|++||++||+
T Consensus       205 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd  284 (301)
T d1sw6a_         205 MGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD  284 (301)
T ss_dssp             HHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC
T ss_pred             HHHHHHCCCCCHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             99998658720000245664046898860148899998667788607668789998899999986879999999987999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             9988899999999999899999
Q 001436          754 PGLLTDPSPEFPLSRTPSDLAS  775 (1078)
Q Consensus       754 vna~tdp~~~d~~G~TPLhlAa  775 (1078)
                      ++.      +|..|.|||++|+
T Consensus       285 ~~~------~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         285 PFI------ANKSGLRPVDFGA  300 (301)
T ss_dssp             TTC------CCTTSCCGGGGTC
T ss_pred             CCC------CCCCCCCHHHHCC
T ss_conf             999------8999999999737

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=1.5e-17  Score=139.70  Aligned_cols=122  Identities=20%  Similarity=0.160  Sum_probs=104.7

Q ss_pred             HHHHHHHHCCHHHHHHHHHHCCCCCCCC------CCCCCCHHHHHHHC---CCHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             9999999719799999999689999855------89999398999982---99888999996799963138999508899
Q 001436          664 ILQKIMKEKLYSWLLRKVCEDGKGPCIL------DDEGQGVLHLAASL---GYDWAIKPTVTAGVSINFRDLSGWTALHW  734 (1078)
Q Consensus       664 ~L~~aa~~~~~~~lv~~Lle~Gadin~~------d~~G~TpLHlAa~~---G~~~iv~~LL~~Gadin~~D~~G~TpLH~  734 (1078)
                      .+..++..+.... +..++..|.+++..      +..|+||||+|+..   |+.+++++|+++|++++.+|..|+||||+
T Consensus         9 ~L~~Av~~~dl~~-l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~   87 (154)
T d1dcqa1           9 SLCEAVKTRDIFG-LLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY   87 (154)
T ss_dssp             HHHHHHHTTCHHH-HHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred             HHHHHHHHCCHHH-HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCC
T ss_conf             9999999588999-999998699867777754578999826999998328998999999997499733313121010001


Q ss_pred             HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             9982999999999975999998889999999999989999966949999999982797
Q 001436          735 AAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT  792 (1078)
Q Consensus       735 Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~  792 (1078)
                      ||..|+.+++++|+++|++++.      +|..|.||||+|+..|+.+++++|++.+..
T Consensus        88 A~~~~~~~~v~~Ll~~gad~~~------~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~  139 (154)
T d1dcqa1          88 CCLTDNAECLKLLLRGKASIEI------ANESGETPLDIAKRLKHEHCEELLTQALSG  139 (154)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHHCCC
T ss_conf             1112333322122135755024------478999999999993999999999993889

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=8e-17  Score=134.57  Aligned_cols=150  Identities=21%  Similarity=0.220  Sum_probs=113.9

Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             31999999961511678998875129988767453101599999997197999999996899998558999939899998
Q 001436          625 CEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS  704 (1078)
Q Consensus       625 ~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~  704 (1078)
                      .++++.|++.++  .+.++.|++.+++.+ .+.  ...+++|.++... ...++..++.........+..+.++++.++.
T Consensus         3 ~t~L~~Aa~~g~--~~~v~~LL~~ga~~~-~~~--~g~t~L~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (153)
T d1awcb_           3 GKKLLEAARAGQ--DDEVRILMANGAPFT-TDW--LGTSPLHLAAQYG-HFSTTEVLLRAGVSRDARTKVDRTPLHMAAS   76 (153)
T ss_dssp             HHHHHHHHHHTC--HHHHHHHHHHTCCCC-CCT--TCCCHHHHHHHHT-CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CHHHHHHHHCCC--HHHHHHHHHCCCCCC-CCC--CCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             979999998789--999999998699834-244--7875333432322-2222222222222222122223332322223


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf             29988899999679996313899950889999829999999999759999988899999999999899999669499999
Q 001436          705 LGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISG  784 (1078)
Q Consensus       705 ~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~  784 (1078)
                      ..+...++.++..|++++.+|..|+||||+|+..|+.++|++|++.|++++.      +|..|.||||+|+.+|+.++++
T Consensus        77 ~~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~------~d~~g~Tpl~~A~~~g~~eiv~  150 (153)
T d1awcb_          77 EGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT------QSKFCKTAFDISIDNGNEDLAE  150 (153)
T ss_dssp             HTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHEEEECCCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHH
T ss_conf             3110122122246876123224673477766430222412311434467726------6898999999999859999998


Q ss_pred             HH
Q ss_conf             99
Q 001436          785 FL  786 (1078)
Q Consensus       785 ~L  786 (1078)
                      +|
T Consensus       151 lL  152 (153)
T d1awcb_         151 IL  152 (153)
T ss_dssp             HH
T ss_pred             HC
T ss_conf             67

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=4e-18  Score=143.97  Aligned_cols=119  Identities=23%  Similarity=0.252  Sum_probs=106.3

Q ss_pred             HHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC-HHHHHHHHCCCH
Q ss_conf             5999999971979999999968999985589999398999982998889999967999631389995-088999982999
Q 001436          663 QILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGW-TALHWAAYCGRE  741 (1078)
Q Consensus       663 t~L~~aa~~~~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~-TpLH~Aa~~G~~  741 (1078)
                      +.||.++.. ++..+++.|++.|++++.++..|.||||+|+ .|+.+++++|+++|++++.+|..|. ||||+|+..|+.
T Consensus         5 ~~L~~Aa~~-G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~~   82 (125)
T d1bi7b_           5 DWLATAAAR-GRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFL   82 (125)
T ss_dssp             THHHHHHHH-TCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCH
T ss_pred             HHHHHHHHC-CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             599999987-7999999999859741332221222222222-22222222122222222222222222222222232222


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             999999975999998889999999999989999966949999999982
Q 001436          742 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAES  789 (1078)
Q Consensus       742 eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~  789 (1078)
                      +++++|++.|++++.      +|..|.||||+|+.+|+.+++++|+..
T Consensus        83 ~~v~~Ll~~ga~~~~------~d~~G~T~l~~A~~~g~~~~v~~Llsa  124 (125)
T d1bi7b_          83 DTLVVLHRAGARLDV------RDAWGRLPVDLAEELGHRDVARYLRAA  124 (125)
T ss_dssp             HHHHHHHHHTCCSSC------CCTTCCCHHHHHHHHTCHHHHHHHSSC
T ss_pred             CCCCCCCCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHC
T ss_conf             222222122222332------457898999999986879999999956

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=7.6e-19  Score=149.14  Aligned_cols=108  Identities=24%  Similarity=0.176  Sum_probs=81.4

Q ss_pred             CHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             39899998299888999996799963138999508899998299999999997599999888999999999998999996
Q 001436          697 GVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS  776 (1078)
Q Consensus       697 TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~  776 (1078)
                      |||++|+..|+.++++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++..      |..|.||||+|+.
T Consensus         4 tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~------d~~g~tpLh~A~~   77 (118)
T d1myoa_           4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAP------DKHHITPLLSAVY   77 (118)
T ss_dssp             HHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCC------SSSCSCHHHHHHT
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC------CCCCCCCHHHHHH
T ss_conf             2899999877999999999842012232222222222222222222222233432023310------1233210223320


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             694999999998279743335755889999946875999
Q 001436          777 NGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAK  815 (1078)
Q Consensus       777 ~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~~~  815 (1078)
                      +|+.+++++|+++|++     ++.+|..|.||++++..+
T Consensus        78 ~~~~~~v~~Ll~~Gad-----~~~~d~~G~t~l~~a~~~  111 (118)
T d1myoa_          78 EGHVSCVKLLLSKGAD-----KTVKGPDGLTALEATDNQ  111 (118)
T ss_dssp             TTCCHHHHHHHTTCCC-----SSSSSSSTCCCCCTCSST
T ss_pred             CCCHHHHHHHHCCCCC-----CEEECCCCCCHHHHHHHH
T ss_conf             4732432433102000-----000389999999998687

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.73  E-value=1.9e-16  Score=131.82  Aligned_cols=147  Identities=24%  Similarity=0.194  Sum_probs=97.8

Q ss_pred             CHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCH
Q ss_conf             15999999971979999999968999985589999398999982998889999967999631389995088999982999
Q 001436          662 YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE  741 (1078)
Q Consensus       662 ~t~L~~aa~~~~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~  741 (1078)
                      +++|+.|+. .+...+++.|++.|++++ .|..|+||||+|+..++..++..++.........+..+.+++++++...+.
T Consensus         3 ~t~L~~Aa~-~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T d1awcb_           3 GKKLLEAAR-AGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA   80 (153)
T ss_dssp             HHHHHHHHH-HTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred             CHHHHHHHH-CCCHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             979999998-789999999998699834-244787533343232222222222222222221222233323222233110


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             99999997599999888999999999998999996694999999998279743335755889999946875999999999
Q 001436          742 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVS  821 (1078)
Q Consensus       742 eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~~~~v~~Ll  821 (1078)
                      +++++|+..|++++.      ++..|.||||+|+..|+.+++++|++.|++     ++.+|..|.||++++...+...++
T Consensus        81 ~~~~~l~~~~~~~~~------~~~~g~T~L~~A~~~g~~~iv~~ll~~gad-----~~~~d~~g~Tpl~~A~~~g~~eiv  149 (153)
T d1awcb_          81 NIVEVLLKHGADVNA------KDMLKMTALHWATEHNHQEVVELLIKYGAD-----VHTQSKFCKTAFDISIDNGNEDLA  149 (153)
T ss_dssp             HHHHHHHTTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             EEEECCCCCCCCCCC------CCCCCCHHHHHHHHCCHHHEEEECCCCCCC-----CCCCCCCCCCHHHHHHHCCCHHHH
T ss_conf             122122246876123------224673477766430222412311434467-----726689899999999985999999

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.72  E-value=4.3e-19  Score=150.90  Aligned_cols=227  Identities=10%  Similarity=-0.044  Sum_probs=124.0

Q ss_pred             CCCCHHHHHHHCCCCCCCHHH-HHHCCCCCCCCCCCCCCCCCCCHHHH-----HHHHHHHHHHCCCCCCCC--CCCCCCH
Q ss_conf             998137899957996420112-12002889997555788998127779-----899999998199998677--6471319
Q 001436          556 VGRVPFYITCSNRLACSEVRE-FDYIVGSVKDADISDIYGSSTSESFL-----HLRLERILSMRSSPQNHL--SEGLCEK  627 (1078)
Q Consensus       556 ~G~tPLhvAa~ng~~cseVv~-feyl~~~~adin~~d~~g~~~t~Lhl-----~~rivkLLl~~g~~~~~~--~~~g~t~  627 (1078)
                      .|.|||++||.+|+  .++++ ++++...+++++..+.+|  +||||+     |.+++++|+..|+..+..  ...|.|+
T Consensus        89 ~~~t~L~~Aa~~g~--~~~~~~~~~L~~~~~~in~~~~~g--~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~  164 (346)
T d2ajaa1          89 KSEVICFVAAITGC--SSALDTLCLLLTSDEIVKVIQAEN--YQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHA  164 (346)
T ss_dssp             CHHHHHHHHHHHCC--HHHHHHHTTC--CCSSCC--CHHH--HHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHH
T ss_pred             CCCCHHHHHHHHCC--HHHHHHHHHHHHCCCCCCCCCCCC--CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCH
T ss_conf             88849999998599--889999999983898553368999--97999999878999999999869970214555699874


Q ss_pred             HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC-------CCCCCHHH
Q ss_conf             99999961511678998875129988767453101599999997197999999996899998558-------99993989
Q 001436          628 QKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILD-------DEGQGVLH  700 (1078)
Q Consensus       628 lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~lv~~Lle~Gadin~~d-------~~G~TpLH  700 (1078)
                      +|+|+..+++  +++++|++.++.....+.....++++++++...++..++++|++.|++++..+       ..+.++++
T Consensus       165 L~~Aa~~g~~--~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~  242 (346)
T d2ajaa1         165 FRLAAENGHL--HVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFI  242 (346)
T ss_dssp             HHHHHHTTCH--HHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHH
T ss_pred             HHHHHHHHHH--HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHH
T ss_conf             3899887567--99999997699420120016899631157762488999999996899866377999875947666889


Q ss_pred             HHHHCCCHHHHHHHHHCCC--CCCCCCC-------CCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             9998299888999996799--9631389-------995088999982999999999975999998889999999999989
Q 001436          701 LAASLGYDWAIKPTVTAGV--SINFRDL-------SGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPS  771 (1078)
Q Consensus       701 lAa~~G~~~iv~~LL~~Ga--din~~D~-------~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPL  771 (1078)
                      .++..+.......+.....  ..+..+.       .+.++|+.|+..|+.+++++|++.++...... ....+..|.|||
T Consensus       243 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~-~~~~~~~g~T~L  321 (346)
T d2ajaa1         243 ARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAP-TATIPGDANELL  321 (346)
T ss_dssp             HHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSS-CCSSTTCCCHHH
T ss_pred             HHHHCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCC-CCCCCCCCCCHH
T ss_conf             9763044378999997362656767733332356244229999861795999999986867555364-456799998199


Q ss_pred             HHHHHCCCHHHHHHHHHC
Q ss_conf             999966949999999982
Q 001436          772 DLASSNGHKGISGFLAES  789 (1078)
Q Consensus       772 hlAa~~G~~~iv~~LLe~  789 (1078)
                      |+|+..||.+++++|++.
T Consensus       322 hlA~~~Gn~e~v~lLL~~  339 (346)
T d2ajaa1         322 RLALRLGNQGACALLLSI  339 (346)
T ss_dssp             HHHHHHTCTTHHHHHTTS
T ss_pred             HHHHHCCCHHHHHHHHCC
T ss_conf             999984819999998589

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.71  E-value=1.1e-16  Score=133.53  Aligned_cols=183  Identities=16%  Similarity=0.151  Sum_probs=94.5

Q ss_pred             CCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHH----HHCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             32065623992379999987997667899999981378999579964201121----20028899975557889981277
Q 001436          525 KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREF----DYIVGSVKDADISDIYGSSTSES  600 (1078)
Q Consensus       525 ~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~tPLhvAa~ng~~cseVv~f----eyl~~~~adin~~d~~g~~~t~L  600 (1078)
                      .++|||..|+++++..||+.|++  ....+..|.||||.||..++ +.+...|    .++.   ..++..+..|  ++++
T Consensus       110 ~LH~Aa~~g~~~~v~~Ll~~gad--~~~~d~~G~TpL~~A~~~~~-~~~~~~~~~ll~~l~---~~~~~~d~~g--~t~l  181 (301)
T d1sw6a_         110 PLHWLTSIANLELVKHLVKHGSN--RLYGDNMGESCLVKAVKSVN-NYDSGTFEALLDYLY---PCLILEDSMN--RTIL  181 (301)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC--TTBCCTTCCCHHHHHHHSSH-HHHTTCHHHHHHHHG---GGGGEECTTC--CCHH
T ss_pred             HHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC-CHHHHHHHHHHHHHH---HHHHHCCCCC--CCHH
T ss_conf             89999986799999999987899--77677643517777422022-024666999999976---4555134532--7787


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHH---
Q ss_conf             79899999998199998677647131999999961511678998875129988767453101599999997197999---
Q 001436          601 FLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWL---  677 (1078)
Q Consensus       601 hl~~rivkLLl~~g~~~~~~~~~g~t~lhlA~k~~~ll~e~~~~LL~~~ad~n~~s~~~~~~t~L~~aa~~~~~~~l---  677 (1078)
                      |..+.....                .....+.+.. + ...+..++............ .....++..........+   
T Consensus       182 h~~~~~~~~----------------~~~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  242 (301)
T d1sw6a_         182 HHIIITSGM----------------TGCSAAAKYY-L-DILMGWIVKKQNRPIQSGTN-EKESKPNDKNGERKDSILENL  242 (301)
T ss_dssp             HHHHHHHTS----------------TTCHHHHHHH-H-HHHHHHHHHGGGCCEEEC-----------------CHHHHHC
T ss_pred             HHHHHHHCC----------------CCCHHHHHHH-H-HHHHHHHHHCCCCCHHCCCC-CCCCHHHHHHHCCHHHHHHHH
T ss_conf             999998375----------------5418999998-9-99999998658720000245-664046898860148899998


Q ss_pred             -HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             -99999689999855899993989999829988899999679996313899950889999
Q 001436          678 -LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA  736 (1078)
Q Consensus       678 -v~~Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa  736 (1078)
                       ...++.  ..+|.+|..|+||||+||..|+..+|++||++|++++.+|..|+|||++|+
T Consensus       243 ~~~~~~~--~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         243 DLKWIIA--NMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             SHHHHHH--HTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             HHHHHHH--CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCC
T ss_conf             6677886--076687899988999999868799999999879999998999999999737

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.69  E-value=5.5e-18  Score=142.92  Aligned_cols=108  Identities=23%  Similarity=0.148  Sum_probs=98.4

Q ss_pred             CHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCH
Q ss_conf             15999999971979999999968999985589999398999982998889999967999631389995088999982999
Q 001436          662 YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE  741 (1078)
Q Consensus       662 ~t~L~~aa~~~~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~  741 (1078)
                      +++|..|+. .+...+++.|++.|++++.++..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+.+|+.
T Consensus         3 ~tpL~~A~~-~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~   81 (118)
T d1myoa_           3 DKEFMWALK-NGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHV   81 (118)
T ss_dssp             HHHHHHHHH-TTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCC
T ss_pred             CHHHHHHHH-CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCH
T ss_conf             728999998-7799999999984201223222222222222222222222223343202331012332102233204732


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             99999997599999888999999999998999996
Q 001436          742 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS  776 (1078)
Q Consensus       742 eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~  776 (1078)
                      +++++|+++|++++.      +|..|.||||+|..
T Consensus        82 ~~v~~Ll~~Gad~~~------~d~~G~t~l~~a~~  110 (118)
T d1myoa_          82 SCVKLLLSKGADKTV------KGPDGLTALEATDN  110 (118)
T ss_dssp             HHHHHHHTTCCCSSS------SSSSTCCCCCTCSS
T ss_pred             HHHHHHHCCCCCCEE------ECCCCCCHHHHHHH
T ss_conf             432433102000000------38999999999868

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.1e-16  Score=131.51  Aligned_cols=105  Identities=20%  Similarity=0.136  Sum_probs=94.9

Q ss_pred             CHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             39899998299888999996799963138999508899998299999999997599999888999999999998999996
Q 001436          697 GVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS  776 (1078)
Q Consensus       697 TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~TPLhlAa~  776 (1078)
                      ++||.||..|+.++++.|+++|+++|.+|.+|+||||+|+..|+.+++++|+++|++++.      +|..|+||||+|+.
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~------~d~~g~tpLh~A~~   76 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA------ADSDGWTPLHCAAS   76 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC------CCTTCCCHHHHHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCCH
T ss_conf             999999993999999999986997561002111111222222222222222222222222------12367642223210


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCC-CCCCHHHHH
Q ss_conf             694999999998279743335755889-999946875
Q 001436          777 NGHKGISGFLAESSLTSLLLSLKMNDS-ADDGALEDS  812 (1078)
Q Consensus       777 ~G~~~iv~~LLe~g~~~~ladln~~d~-~g~tal~~a  812 (1078)
                      .|+.+++++|+++|++     ++..+. .+.+++.++
T Consensus        77 ~g~~~~v~~Ll~~ga~-----v~~~~~~~~~~~~~~~  108 (130)
T d1ycsb1          77 CNNVQVCKFLVESGAA-----VFAMTYSDMQTAADKC  108 (130)
T ss_dssp             TTCHHHHHHHHHTTCC-----TTCCCSSSCCCHHHHC
T ss_pred             HHHHHHHHHHHHCCCC-----CCCCCCCCCCCHHHHH
T ss_conf             2688999999986998-----6646689998899999

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.2e-16  Score=133.35  Aligned_cols=119  Identities=18%  Similarity=0.182  Sum_probs=102.5

Q ss_pred             CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHHH
Q ss_conf             99398999982998889999967999631389995088999982999999999975999998889999999999-98999
Q 001436          695 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSR-TPSDL  773 (1078)
Q Consensus       695 G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna~tdp~~~d~~G~-TPLhl  773 (1078)
                      +.++||+||..|+.+++++|+++|+++|.+|..|+||||+|+ .|+.+++++|++.|++++..+      ..+. ||||+
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~------~~~~~~~L~~   75 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCAD------PATLTRPVHD   75 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCC------TTTCCCHHHH
T ss_pred             CHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCC
T ss_conf             705999999877999999999859741332221222222222-222222221222222222222------2222222222


Q ss_pred             HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             9966949999999982797433357558899999468759999999998147
Q 001436          774 ASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTA  825 (1078)
Q Consensus       774 Aa~~G~~~iv~~LLe~g~~~~ladln~~d~~g~tal~~a~~~~v~~Lle~~a  825 (1078)
                      |+..|+.+++++|++.|++     ++.+|..|.||++++...+...+++.+.
T Consensus        76 A~~~g~~~~v~~Ll~~ga~-----~~~~d~~G~T~l~~A~~~g~~~~v~~Ll  122 (125)
T d1bi7b_          76 AAREGFLDTLVVLHRAGAR-----LDVRDAWGRLPVDLAEELGHRDVARYLR  122 (125)
T ss_dssp             HHHHTCHHHHHHHHHHTCC-----SSCCCTTCCCHHHHHHHHTCHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCHHHHHHHCCCHHHHHHHH
T ss_conf             2232222222222122222-----3324578989999999868799999999

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.59  E-value=1.8e-14  Score=117.60  Aligned_cols=124  Identities=13%  Similarity=0.020  Sum_probs=94.5

Q ss_pred             HHHHCCCHHHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHHH--CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             99961511678998875129988767----453101599999997--197999999996899998558999939899998
Q 001436          631 ISKIIQLKEEEESYQMVEANPEKNLS----QHVEKYQILQKIMKE--KLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS  704 (1078)
Q Consensus       631 A~k~~~ll~e~~~~LL~~~ad~n~~s----~~~~~~t~L~~aa~~--~~~~~lv~~Lle~Gadin~~d~~G~TpLHlAa~  704 (1078)
                      +.+.+.+  ..+..++..+.+.+...    .+....+++|.++..  .+...++++|++.|++++.+|..|.||||+||.
T Consensus        13 Av~~~dl--~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A~~   90 (154)
T d1dcqa1          13 AVKTRDI--FGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCL   90 (154)
T ss_dssp             HHHTTCH--HHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHH
T ss_pred             HHHHCCH--HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
T ss_conf             9995889--99999998699867777754578999826999998328998999999997499733313121010001111


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf             2998889999967999631389995088999982999999999975999998
Q 001436          705 LGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGL  756 (1078)
Q Consensus       705 ~G~~~iv~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAdvna  756 (1078)
                      .|+.+++++|+.+|++++.+|..|+||||+|+..|+.+++++|++.++..-.
T Consensus        91 ~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~~~  142 (154)
T d1dcqa1          91 TDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFN  142 (154)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCC
T ss_conf             2333322122135755024478999999999993999999999993889778

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.33  E-value=1.8e-07  Score=67.15  Aligned_cols=49  Identities=18%  Similarity=0.266  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CHHHHHHHHHHHHHHHHHHH
Q ss_conf             01333568876456556899998620230---05537987868999999999
Q 001436          899 DGLAHSAAIQIQKKFRGWKKRKEFLLIRQ---RIVKIQAHVRGHQARKKYRP  947 (1078)
Q Consensus       899 ~~~l~~AAi~IQk~~Rg~~~Rk~fl~iR~---aai~IQa~~RG~~aRk~y~~  947 (1078)
                      ...+..+++.||++||||++||+|+++|.   ++++||++||+|++||+|+.
T Consensus       727 ~~~l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~~~  778 (789)
T d1kk8a2         727 DERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQW  778 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf             9999999999999999999999999999999999999999999999803699

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=98.33  E-value=1.4e-07  Score=67.98  Aligned_cols=47  Identities=26%  Similarity=0.284  Sum_probs=24.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             3335688764565568999986202---3005537987868999999999
Q 001436          901 LAHSAAIQIQKKFRGWKKRKEFLLI---RQRIVKIQAHVRGHQARKKYRP  947 (1078)
Q Consensus       901 ~l~~AAi~IQk~~Rg~~~Rk~fl~i---R~aai~IQa~~RG~~aRk~y~~  947 (1078)
                      .+..+++.||++||||++|++|+++   |.++++||++||||++||+|..
T Consensus       733 ~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~~~  782 (794)
T d2mysa2         733 KLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPW  782 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             99999999999999999999999999999999999999999999823699

>d2cxka1 b.1.18.1 (A:872-953) Calmodulin binding transcription activator 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: Calmodulin binding transcription activator 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=5e-09  Score=78.32  Aligned_cols=81  Identities=32%  Similarity=0.775  Sum_probs=69.2

Q ss_pred             EEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
Q ss_conf             88624898778998169995356566000233206562399237999998799766789999998137899957996420
Q 001436          494 IIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSE  573 (1078)
Q Consensus       494 I~dfSP~wa~~~ggtKVlI~G~f~~~~~~~~~~~~Ac~fG~veVv~~LLq~Gv~rC~~p~~~~G~tPLhvAa~ng~~cse  573 (1078)
                      |++++|.|++..|||+|.|.|.++....     .+.|+||+..+....+..+.++|..|++.+|.+++.++..+.. .+.
T Consensus         2 It~isP~~G~~~GGt~V~I~G~~f~~~~-----~~~c~fG~~~~~~~~vs~~~i~C~tP~~~~G~v~v~Vs~ng~~-~s~   75 (82)
T d2cxka1           2 VTDYSPEWSYPEGGVKVLITGPWQEASN-----NYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQI-ISN   75 (82)
T ss_dssp             CCEEECSEECTTCCCEEEEESSCCCCSS-----CEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTEE-CSC
T ss_pred             EEEECCCCEECCCCEEEEEEECCCCCCC-----EEEEEEEEEECCEEEEEEEEEEEECCCCCCEEEEEEEEECCEE-ECC
T ss_conf             9398189660899999999973666445-----0799997200305997125999984753561589999989998-136


Q ss_pred             HHHHHHC
Q ss_conf             1121200
Q 001436          574 VREFDYI  580 (1078)
Q Consensus       574 Vv~feyl  580 (1078)
                      -+.|+|+
T Consensus        76 ~~~F~Yr   82 (82)
T d2cxka1          76 SVVFEYK   82 (82)
T ss_dssp             CEEEEEC
T ss_pred             CCEEEEC
T ss_conf             7088859

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=97.82  E-value=1.4e-05  Score=53.54  Aligned_cols=54  Identities=19%  Similarity=0.131  Sum_probs=42.7

Q ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHCC
Q ss_conf             6899998620230055379878689999999999---99999999999999975103
Q 001436          915 GWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPI---IWSVGILEKVILRWRRKGSG  968 (1078)
Q Consensus       915 g~~~Rk~fl~iR~aai~IQa~~RG~~aRk~y~~~---r~aa~~IQk~iR~w~~rr~~  968 (1078)
                      ..+.+++-..+..+++.||++||||++|++|+++   +.++++||+.||+|+.|+..
T Consensus       724 ~~LE~~r~~~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         724 GLLEEMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999999999999999999999999999999999999999999999999998236

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=97.80  E-value=1.6e-05  Score=53.10  Aligned_cols=48  Identities=23%  Similarity=0.336  Sum_probs=39.9

Q ss_pred             HHHCCCCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHCC
Q ss_conf             862023005537987868999999999999---999999999999975103
Q 001436          921 EFLLIRQRIVKIQAHVRGHQARKKYRPIIW---SVGILEKVILRWRRKGSG  968 (1078)
Q Consensus       921 ~fl~iR~aai~IQa~~RG~~aRk~y~~~r~---aa~~IQk~iR~w~~rr~~  968 (1078)
                      +-..+.+++++||++||||++|++|++++.   ++.+||+.||+|+.||+.
T Consensus       726 r~~~l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~  776 (789)
T d1kk8a2         726 RDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  776 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             999999999999999999999999999999999999999999999998036

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=94.06  E-value=0.012  Score=32.27  Aligned_cols=28  Identities=21%  Similarity=0.299  Sum_probs=18.7

Q ss_pred             HHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             9999999999998314499999999998
Q 001436         1004 EERLQKALGRVKSMVQYPEARAQYRRLL 1031 (1078)
Q Consensus      1004 e~r~~~A~~riqs~~r~~~aR~~y~rll 1031 (1078)
                      +.++.+++++||++||++.+|++|.|++
T Consensus       702 ~~~l~~~~~~iQ~~~R~~l~Rk~~~r~r  729 (730)
T d1w7ja2         702 ADKLRAACIRIQKTIRGWLMRKKYMRMR  729 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999999999999999999999861

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=93.99  E-value=0.02  Score=30.73  Aligned_cols=34  Identities=26%  Similarity=0.347  Sum_probs=25.2

Q ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999862023005537987868999999999999
Q 001436          917 KKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIW  950 (1078)
Q Consensus       917 ~~Rk~fl~iR~aai~IQa~~RG~~aRk~y~~~r~  950 (1078)
                      +.+++-..+..+++.||++||||++||+|+++|+
T Consensus       697 LE~~r~~~l~~~~~~iQ~~~R~~l~Rk~~~r~r~  730 (730)
T d1w7ja2         697 LEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRR  730 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             9999999999999999999999999999998619