Citrus Sinensis ID: 001453

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070-----

MTMTMTMAKKRHLSYQAQSQNHYGGEQQNWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGNTTTTSAVTVGNVEDDGRLDLNLGGGLTAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPEDITSRMLIHGHGNQSNNPTANVDIVNLLTALARAQGKTEDRSISCSSVPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDLLAVLSSTLTAPSPDTLAAHSQRSSHSSDSEKTKSTCPEQATPNFLKRTTMDFPSVGGERSSTSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIEERSPSSSPVVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCSFQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQLEGNLLQRINSLVQDSDSDFWRNARFLVHTGKQLASHKDGNIRVCKSWRTWSSPELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYDEIILAGLKIQDTSPSVLGRFFIEVENGFKGNSFPVIIADATICKELSLLESEFGAEAKVCDVISEHQAHEYGRPRSREEVLHFLNELGWLFQRKRASSIVKGSDYSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRNGQVTIPVGVEIEQSGLAKEQVHGLSSQFKQRGKSCTKCAVAAAKLNKRVRGSQGLLNRPYIHSMLAIAAVCVCVCLFLRGSPDIGLVAPFKWENLDFGPK

ccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccEEEEcccEEEccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHcccccccHHHHHHccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccHHHHHHHHHHHHccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccEEEEEEcccEEEEEcccccccccEEEEccEEEEcccEEEEEEEEccccccccEEEEEEccccccccccccccccccccccEEEEEEEcccccccccccEEEEEcccccccccEEEccHHHHHHHHHHHHHHcccccHHHHHHccHHHHccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccccccccccccHHHHHcccccHHHHHHHHHcccccccccccccccccccccHHHHHHHccccHHHHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccc

ccEEcccccccccccccccccccccccccccccccccccHHHEcccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccHHHHHHHHHHccHHHHHccccEEEEcccHHHHHHHccHcccHHHHcccccHHHHHHHcHHHHccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHccccccccHHHHccccccccccccccccccccccccccccccccccHHHHHHHHccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccHHHHHHHHHHHHcccccHHHccccccEEEEEEEcccHHHHHHHHHcHHHHHHHHHHcccccHccccEEEEEEccEEEEEEccEEEEEcccccccccEEEEEEEEEEEccccEEEEEEEEcccccccEEEEEEcccEEEccccccccccccccccccEEEEEccccccccccEEEEEEccccccccEEEEEcHHHHHHHHHHHHHHcccccccccccHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHEccccccccccEEEcccccccccccccHEEEEcccccHHHHHHHcccccHHHHHHHHHccccccccHHHHHHHcccHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccEEEEEcccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccEccccccccc

MTMTMTMAKKRHLSYQAqsqnhyggeqqnwnpklwdwdsvgfvgkpvvdsdpevlrlggatasespnkttdninynynynnqkkgnttttsavtvgnveddgrldlnlgggltavdveqpeppvvtskpnkrvrsgspgtapypmcqvdnckedlsnakdyhrrhkvceLHSKSTKALVGKQMQRFCqqcsrfhplsefdegkRSCRRRLaghnrrrrktqpeditsrmlihghgnqsnnptanVDIVNLLTALARAQgktedrsiscssvpDREQLLMILSKinslplpadLAAKLhnfgslnrktpvhtstdvqnrlnentsspsTMDLLAVLSStltapspdtlaahsqrsshssdsektkstcpeqatpnflkrttmdfpsvggersstsyqspvedsdgqnqetrvnlplqlfssspeddsppklsssrkyfssdssnpieerspssspvvqtffpmqstsetvkseklsigrevnanvegnrsrgsimplelfrgsnkaadncsfqsfpyqagytsssgsdhspsslnsdaqdcTGRIIFKLfdkdpsqfpgtLRKEIYNWLsnspsemesyirpgcvilslyvsmpyatWEQLEGNLLQRINSLvqdsdsdfwRNARFLVHtgkqlashkdgnirvckswrtwsspelisvsplavvggqelsfklrgrnltnlgtkihctfmggyasqevtsstcqgsiYDEIILAGlkiqdtspsvlGRFFIEvengfkgnsfpvIIADATICKELSLLESEFGAEAKVCDVIsehqaheygrprsrEEVLHFLNELGWLFQrkrassivkgsdyslsrFKFLLVFSVDRGCCALVKAILDILVEGnlsmdglsRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYsltssndtpqkyifppnlagpggitplhlaactsdsdDIIDAltndpqeigpsswnsildasghspysyaLMKNNHAYNKLVARKLadrrngqvtipVGVEIEQSGLAKEQVHGLSSQFKQRGKSCTKCAVAAAKLNkrvrgsqgllnrpyiHSMLAIAAVCVCVCLFlrgspdiglvapfkwenldfgpk

MTMTMTMAKKRHLSYQAQSQNHYGGEQQNWNPKLWDWDSVGFVGKPVVDSDPEVLRLggatasespnkttdnINYNYNynnqkkgntTTTSAVTVGNVEDDGRLDLNLGGGLtavdveqpeppvvtskpnkrvrsgspgtapypmcQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRfhplsefdegkrscrrrlaghnrrrrktqpeditSRMLIhghgnqsnnptANVDIVNLLTALARAqgktedrsiscssvPDREQLLMILSKINSLPLPADLAAKLHNFGSlnrktpvhtstdvqnrlnentsspsTMDLLAVLSSTLTAPSPDTLAAHsqrsshssdsektkstcpeqatpnflkrttmdfpsvggersstsyqspvedsdgqnqETRVNLPLQlfssspeddsppklSSSRKYFSsdssnpieerspssspvvQTFFPMQstsetvkseklsigrevnanvegnrsrgsiMPLELFRGSNKAADNCSFQSFPYQAGYTSSSGSDHSPSSLNSDAQDCTGRIIFKLfdkdpsqfpgTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQLEGNLLQRINSLVQDSDSDFWRNARFLVhtgkqlashkdgnirVCKSWRTWSSPELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYDEIILAGLKIQDTSPSVLGRFFIEVENGFKGNSFPVIIADATICKELSLLESEFGAEAKVCDVISEHQAheygrprsREEVLHFLNELGWLFQRKRASsivkgsdyslSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRNGQVTIPVGVEIEQSGLAKEQVHGLSsqfkqrgkSCTKCAVAAAklnkrvrgsqgLLNRPYIHSMLAIAAVCVCVCLFLRGSpdiglvapfkwenldfgpk

MTMTMTMAKKRHLSYQAQSQNHYGGEQQNWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPnkttdninynynynnqkkgnttttSAVTVGNVEddgrldlnlggglTAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCrrrlaghnrrrrKTQPEDITSRMLIHGHGNQSNNPTANVDIVNLLTALARAQGKTEDRSISCSSVPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDLLAVLSSTLTAPSPDTLAAHsqrsshssdsektkstCPEQATPNFLKRTTMDFPSVGGERSSTSYQSPVEDSDGQNQETRVNLPLQLFSSSPEDDSPPKLsssrkyfssdssNPIEERSPSSSPVVQTFFPMQSTSETVKSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCSFQSFPYQAGYTsssgsdhspsslnsDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQLEGNLLQRINSLVQDSDSDFWRNARFLVHTGKQLASHKDGNIRVCKSWRTWSSPELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYDEIILAGLKIQDTSPSVLGRFFIEVENGFKGNSFPVIIADATICKELSLLESEFGAEAKVCDVISEHQAHEYGRPRSREEVLHFLNELGWLFQRKRASSIVKGSDYSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRNGQVTIPVGVEIEQSGLAKEQVHGLSSQFKQRGKSCTKCAVAAAKLNKRVRGSQGLLNRPYIHSMLAIAAVCVCVCLFLRGSPDIGLVAPFKWENLDFGPK

***************************QNWNPKLWDWDSVGFVGKPVVDS**********************INYNYNY*************VTVGNVE**GRLDLNLGGGLT************************************************HRRHKVCELH****KALVGKQMQRFCQQCSRFH*************************************************NVDIVNLLTALAR*******************QLLMILSKINSLPLPADLAAKLHNF***********************************************************************************************************************************************************************************************************************************************CTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQLEGNLLQRINSLVQDSDSDFWRNARFLVHTGKQLASHKDGNIRVCKSWRTWSSPELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYDEIILAGLKIQDTSPSVLGRFFIEVENGFKGNSFPVIIADATICKELSLLESEFGAEAKVCDVISEHQAHEYGR**SREEVLHFLNELGWLFQRKRASSIVKGSDYSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALT**********WNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRNGQVTIPVGVEIEQS******************KSCTKCAVAAAKLNKRVRGSQGLLNRPYIHSMLAIAAVCVCVCLFLRGSPDIGLVAPFKWENLD****

******************************NPKLWDWDSVGFV***************************************************************NLGGG***********************************QVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRS**************************************************************************************************************************************************************************************************************************************************************************************************************************************************IIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQLEGNLLQRINSLVQDSDSDFWRNARFLVHTGKQLASHKDGNIRVCKSWRTWSSPELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYDEIILAGLKIQDTSPSVLGRFFIEVENGFKGNSFPVIIADATICKELSLLESEFGAEAKVCDVISEHQ***YGRPRSREEVLHFLNELGWLFQRK**********YSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRNGQVTIPVG*****************************************RGSQGLLNRPYIHSMLAIAAVCVCVCLFLRGSPDIGLVAPFKWENLDFGP*

**************************QQNWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGATASESPNKTTDNINYNYNYNNQKKGNTTTTSAVTVGNVEDDGRLDLNLGGGLTAVDVEQPEP***************PGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLA***********EDITSRMLIHGHGNQSNNPTANVDIVNLLTALAR*************SVPDREQLLMILSKINSLPLPADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDLLAVLSSTLTAPS*************************EQATPNFLKRTTMDFP***********************ETRVNLPLQLFS***********************************VVQTFFPMQ**********LSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCSFQSFPYQAG****************DAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQLEGNLLQRINSLVQDSDSDFWRNARFLVHTGKQLASHKDGNIRVCKSWRTWSSPELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYDEIILAGLKIQDTSPSVLGRFFIEVENGFKGNSFPVIIADATICKELSLLESEFGAEAKVCDVISEHQAHEYGRPRSREEVLHFLNELGWLFQRKRASSIVKGSDYSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRNGQVTIPVGVEIEQSG*********************KCAVAAAKLNKRVRGSQGLLNRPYIHSMLAIAAVCVCVCLFLRGSPDIGLVAPFKWENLDFGPK

MT***T*AKKRHLSYQAQ*********QNWNPKLWDWDSVGFVGKP******************************************************DGRLDLNLGGGLTA****************************YPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRL*G*******************************NVDIVNLLTALARAQGK***RSIS**SVPDREQLLMILSKINSLPLPADLAAK**N******************************DLLA*L*STLTAPSPDTLAAHS************************************************************NLP***************************************P************************************************************************************DCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWEQLEGNLLQRINSLVQDSDSDFWRNARFLVHTGKQLASHKDGNIRVCKSWRTWSSPELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYDEIILAGLKIQDTSPSVLGRFFIEVENGFKGNSFPVIIADATICKELSLLESEFGA********S*****EYGRPRSREEVLHFLNELGWLFQRKRASSIVKGSDYSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRNGQVTIPVGVEIEQS*******HGLSSQFKQRGKSCTKCAVAAAKLNKRVRGSQGLLNRPYIHSMLAIAAVCVCVCLFLRGSPDIGLVAPFKWENLDF***

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1075	2.2.26 [Sep-21-2011]
Q8RY95		1035	Squamosa promoter-binding	yes	no	0.933	0.970	0.561	0.0
Q700C2		988	Squamosa promoter-binding	no	no	0.871	0.948	0.560	0.0
Q6Z8M8		1140	Squamosa promoter-binding	yes	no	0.950	0.896	0.475	0.0
A2YX04		1140	Squamosa promoter-binding	N/A	no	0.950	0.896	0.475	0.0
Q9SMX9		881	Squamosa promoter-binding	no	no	0.473	0.577	0.326	1e-80
Q9LGU7		862	Squamosa promoter-binding	no	no	0.484	0.604	0.315	5e-80
Q75LH6		969	Squamosa promoter-binding	no	no	0.486	0.539	0.331	9e-80
Q9S7P5		927	Squamosa promoter-binding	no	no	0.468	0.543	0.342	2e-79
P0DI11		359	Squamosa promoter-binding	no	no	0.080	0.242	0.643	1e-29
B9DI20		359	Squamosa promoter-binding	no	no	0.080	0.242	0.643	1e-29

>sp\|Q8RY95\|SPL14_ARATH Squamosa promoter-binding-like protein 14 OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3	Back alignment and function desciption

 Score = 1105 bits (2857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1091 (56%), Positives = 770/1091 (70%), Gaps = 87/1091 (7%)

Query: 1    MTMTMTMAKKRHLSY-------QAQSQNHYGGEQQNWNPKLWDWDSVGFVGKPVVDSDPE 53
            M +  ++ +KR L Y       Q+Q Q      +  WN K+WDWDS  F  KPV   D E
Sbjct: 12   MFIHQSLGRKRDLYYPMSNRLVQSQPQ-----RRDEWNSKMWDWDSRRFEAKPV---DVE 63

Query: 54   VLRLGGATASESPNKTTDNINYNYNYNNQKKGNTTTTSAVTVGNVEDDGR-LDLNLGGGL 112
            V                                      +T+ N   + R LDLNLG GL
Sbjct: 64   VQEFD----------------------------------LTLRNRSGEERGLDLNLGSGL 89

Query: 113  TAVDVEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHS 172
            TAV+        V  +PNK+VRSGSPG   YPMCQVDNC EDLS+AKDYHRRHKVCE+HS
Sbjct: 90   TAVEETTTTTQNV--RPNKKVRSGSPG-GNYPMCQVDNCTEDLSHAKDYHRRHKVCEVHS 146

Query: 173  KSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKT-QPEDITSRMLI 231
            K+TKALVGKQMQRFCQQCSRFH LSEFDEGKRSCRRRLAGHNRRRRKT QPE++ S +++
Sbjct: 147  KATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRRRKTTQPEEVASGVVV 206

Query: 232  HGHGNQSNN-PTANVDIVNLLTALARAQGKTEDRS-ISCSSVPDREQLLMILSKINSLPL 289
             G+ + +NN   AN+D++ LLTALA AQGK   +  +   +VPDREQLL IL+KIN+LPL
Sbjct: 207  PGNHDTTNNTANANMDLMALLTALACAQGKNAVKPPVGSPAVPDREQLLQILNKINALPL 266

Query: 290  PADLAAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDLLAVLSSTLTAPSPDTLAA 349
            P DL +KL+N GSL RK   H + + QN +N   +SPSTMDLLAVLS+TL + SPD LA 
Sbjct: 267  PMDLVSKLNNIGSLARKNMDHPTVNPQNDMN--GASPSTMDLLAVLSTTLGSSSPDALAI 324

Query: 350  HSQRSSHSSDSEKTKSTCPEQATPNFLKRTTMDFPSVGGERSSTSYQSPVEDSDGQNQET 409
             SQ    + DSEKTK +  E      L++ T  F SVGGERSS+S QSP +DSD + Q+T
Sbjct: 325  LSQGGFGNKDSEKTKLSSYENGVTTNLEKRTFGFSSVGGERSSSSNQSPSQDSDSRGQDT 384

Query: 410  RVNLPLQLFSSSPEDDSPPKLSSSRKYFSSDSSNPIEERSPSSSPVVQTFFPMQSTSETV 469
            R +L LQLF+SSPED+S P ++SSRKY+SS SSNP+E+RSPSSSPV+Q  FP+Q++ ET+
Sbjct: 385  RSSLSLQLFTSSPEDESRPTVASSRKYYSSASSNPVEDRSPSSSPVMQELFPLQASPETM 444

Query: 470  KSEKLSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCSFQSFPYQAGYTSSSGSDHS 529
            +S+          N + +  R   +PLELF  SN+ A + +F+ F  Q+GY +SSGSD+S
Sbjct: 445  RSK----------NHKNSSPRTGCLPLELFGASNRGAADPNFKGFGQQSGY-ASSGSDYS 493

Query: 530  PSSLNSDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLY 589
            P SLNSDAQD TG+I+FKL DKDPSQ PGTLR EIYNWLSN PSEMESYIRPGCV+LS+Y
Sbjct: 494  PPSLNSDAQDRTGKIVFKLLDKDPSQLPGTLRSEIYNWLSNIPSEMESYIRPGCVVLSVY 553

Query: 590  VSMPYATWEQLEGNLLQRINSLVQDSDSDFWRNARFLVHTGKQLASHKDGNIRVCKSWRT 649
            V+M  A WEQLE  LLQR+  L+Q+S SDFWRNARF+V+TG+QLASHK+G +R  KSWRT
Sbjct: 554  VAMSPAAWEQLEQKLLQRLGVLLQNSPSDFWRNARFIVNTGRQLASHKNGKVRCSKSWRT 613

Query: 650  WSSPELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYD 709
            W+SPELISVSP+AVV G+E S  +RGR+LTN G  I CT MG Y + EVT + C+ +I+D
Sbjct: 614  WNSPELISVSPVAVVAGEETSLVVRGRSLTNDGISIRCTHMGSYMAMEVTRAVCRQTIFD 673

Query: 710  EIILAGLKIQDTSPSVLGRFFIEVENGFKGNSFPVIIADATICKELSLLESEFGAEAKVC 769
            E+ +   K+Q+  P  LGR FIEVENGF+G+SFP+IIA+A+ICKEL+ L  EF  +++  
Sbjct: 674  ELNVNSFKVQNVHPGFLGRCFIEVENGFRGDSFPLIIANASICKELNRLGEEFHPKSQ-- 731

Query: 770  DVISEHQAHEYGR-PRSREEVLHFLNELGWLFQRKRASSIVKGSDYSLSRFKFLLVFSVD 828
              ++E QA    R P SREEVL FLNELGWLFQ+ + S + + SD+SL+RFKFLLV SV+
Sbjct: 732  -DMTEEQAQSSNRGPTSREEVLCFLNELGWLFQKNQTSELREQSDFSLARFKFLLVCSVE 790

Query: 829  RGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHY---- 884
            R  CAL++ +LD+LVE NL  D L+RE+L+ML EIQLLNRAVK K  +MV+LLIHY    
Sbjct: 791  RDYCALIRTLLDMLVERNLVNDELNREALDMLAEIQLLNRAVKRKSTKMVELLIHYLVNP 850

Query: 885  -SLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSIL 943
             +L+SS    +K++F PN+ GPGGITPLHLAACTS SDD+ID LTNDPQEIG SSWN++ 
Sbjct: 851  LTLSSS----RKFVFLPNITGPGGITPLHLAACTSGSDDMIDLLTNDPQEIGLSSWNTLR 906

Query: 944  DASGHSPYSYALMKNNHAYNKLVARKLADRRNGQVTIPVGVE-IEQSGLAKEQVHGLSSQ 1002
            DA+G +PYSYA ++NNH YN LVARKLAD+RN QV++ +  E ++Q+GL+K     LS +
Sbjct: 907  DATGQTPYSYAAIRNNHNYNSLVARKLADKRNKQVSLNIEHEVVDQTGLSKR----LSLE 962

Query: 1003 FKQRGKSCTKCAVAAAKLNKRVRGSQGLLNRPYIHSMLAIAAVCVCVCLFLRGSPDIGLV 1062
              +   SC  CA  A K  +RV GSQ L   P IHSMLA+A VCVCVC+F+   P +   
Sbjct: 963  MNKSSSSCASCATVALKYQRRVSGSQRLFPTPIIHSMLAVATVCVCVCVFMHAFPIVRQG 1022

Query: 1063 APFKWENLDFG 1073
            + F W  LD+G
Sbjct: 1023 SHFSWGGLDYG 1033

Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May play a role in plant development.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q700C2\|SPL16_ARATH Squamosa promoter-binding-like protein 16 OS=Arabidopsis thaliana GN=SPL16 PE=2 SV=2	Back alignment and function description

>sp\|Q6Z8M8\|SPL15_ORYSJ Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. japonica GN=SPL15 PE=2 SV=1	Back alignment and function description

>sp\|A2YX04\|SPL15_ORYSI Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. indica GN=SPL15 PE=2 SV=1	Back alignment and function description

>sp\|Q9SMX9\|SPL1_ARATH Squamosa promoter-binding-like protein 1 OS=Arabidopsis thaliana GN=SPL1 PE=1 SV=2	Back alignment and function description

>sp\|Q9LGU7\|SPL1_ORYSJ Squamosa promoter-binding-like protein 1 OS=Oryza sativa subsp. japonica GN=SPL1 PE=2 SV=1	Back alignment and function description

>sp\|Q75LH6\|SPL6_ORYSJ Squamosa promoter-binding-like protein 6 OS=Oryza sativa subsp. japonica GN=SPL6 PE=2 SV=1	Back alignment and function description

>sp\|Q9S7P5\|SPL12_ARATH Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana GN=SPL12 PE=1 SV=1	Back alignment and function description

>sp\|P0DI11\|SP13B_ARATH Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana GN=SPL13B PE=3 SV=1	Back alignment and function description

>sp\|B9DI20\|SP13A_ARATH Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana GN=SPL13A PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1075
225457689		1070	PREDICTED: squamosa promoter-binding-lik	0.959	0.963	0.705	0.0
255539362		1073	Squamosa promoter-binding protein, putat	0.967	0.969	0.703	0.0
224065627		1044	predicted protein [Populus trichocarpa]	0.881	0.908	0.700	0.0
297745623		921	unnamed protein product [Vitis vinifera]	0.822	0.959	0.626	0.0
449455740		1031	PREDICTED: squamosa promoter-binding-lik	0.926	0.966	0.600	0.0
449531663		1031	PREDICTED: LOW QUALITY PROTEIN: squamosa	0.926	0.966	0.599	0.0
356574155		1009	PREDICTED: squamosa promoter-binding-lik	0.917	0.977	0.583	0.0
356523388		1019	PREDICTED: squamosa promoter-binding-lik	0.924	0.975	0.588	0.0
297845078		1040	hypothetical protein ARALYDRAFT_472338 [	0.946	0.977	0.566	0.0
15218091		1035	squamosa promoter binding-like protein 1	0.933	0.970	0.561	0.0

>gi\|225457689\|ref\|XP_002273784.1\| PREDICTED: squamosa promoter-binding-like protein 14-like [Vitis vinifera]	Back alignment and taxonomy information

 Score = 1437 bits (3719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 760/1077 (70%), Positives = 865/1077 (80%), Gaps = 46/1077 (4%)

Query: 7    MAKKRHLSY-----QAQSQNHYGGEQQNWNPKLWDWDSVGFVGKPVVDSDPEVLRLGGAT 61
            MAKKR L Y     Q Q    +   + NWNPK+WDWDSV FV  P+   + E+LRLG AT
Sbjct: 28   MAKKRDLPYPSSNFQHQHPQRFQNPRDNWNPKVWDWDSVRFVANPL---ESELLRLGTAT 84

Query: 62   ASESPNKTTDNINYNYNYNNQKKGNTTTTSAVTVGNV-EDDGRLDLNLGGGLTAVDVEQP 120
              ++  K             +K+  T  T+A+    V EDD  L L LGGGL+++     
Sbjct: 85   PVQTELK-------------KKQEGTGITTALKKNPVDEDDESLRLKLGGGLSSI----- 126

Query: 121  EPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVG 180
            E PV  S+P+KRVRSGSPG++ YPMCQVDNC+EDLSNAKDYHRRHKVCE+HSKSTKALVG
Sbjct: 127  EEPV--SRPSKRVRSGSPGSSSYPMCQVDNCREDLSNAKDYHRRHKVCEMHSKSTKALVG 184

Query: 181  KQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPEDITSRMLIHGHGNQSNN 240
            KQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPED++SR+L+ G  N+ N 
Sbjct: 185  KQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPEDVSSRLLLPG--NRDNT 242

Query: 241  PTANVDIVNLLTALARAQGKTEDRSISCSSVPDREQLLMILSKINSLPLPADLAAKLHNF 300
               N+DIVNLLTALAR QG  E +S + SSVPDR+QL+ ILSK+NSLPLPAD AAKL   
Sbjct: 243  GNRNLDIVNLLTALARTQGNNEVKSANNSSVPDRDQLIQILSKLNSLPLPADFAAKLPIS 302

Query: 301  GSLNRKTPVHTSTDVQNRLNENTSSPSTMDLLAVLSSTLTAPSPDTLAAHSQRSSHSSDS 360
            GSLNR TP  +S++ QNRLN  TSSPSTMDLLAVLS+TL A +PD LA  SQRSS SSDS
Sbjct: 303  GSLNRNTPGQSSSEHQNRLNGKTSSPSTMDLLAVLSATLAASAPDALAFLSQRSSQSSDS 362

Query: 361  EKTKSTCPEQAT-PNFLKRTTMDFPSVGGERSSTSYQSPVEDSDGQNQETRVNLPLQLFS 419
            EKTK TC +QAT P+  KR T++FPSVGGERSSTSYQSP+EDSD Q QET+ NLPLQLFS
Sbjct: 363  EKTKLTCLDQATGPDLQKRQTLEFPSVGGERSSTSYQSPMEDSDCQVQETQPNLPLQLFS 422

Query: 420  SSPEDDSPPKLSSSRKYFSSDSSNPIEERSPSSSP-VVQTFFPMQSTSETVKSEKLSIGR 478
            SS EDDSPPKL S+RKYFSSDSSNP+EERSPSSSP VVQ  FPMQ++ ETVK E++SI  
Sbjct: 423  SSLEDDSPPKLGSARKYFSSDSSNPMEERSPSSSPPVVQKLFPMQASMETVKPERMSISG 482

Query: 479  EVNANVEGNRSRGSIMPLELFRGSNKAADNCSFQSFPYQAGYTSSSGSDHSPSSLNSDAQ 538
            EVN N+   R+ G+   LELFR S++ ADN + QSFPYQAGYTSSSGSDHSPSSLNSDAQ
Sbjct: 483  EVNGNIGAGRAHGAT-SLELFRRSDRGADNGAVQSFPYQAGYTSSSGSDHSPSSLNSDAQ 541

Query: 539  DCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMPYATWE 598
            D TGRIIFKLFDKDPS FPGTLR EIYNWL++SPSEMESYIRPGCV+LS+Y SM  A WE
Sbjct: 542  DRTGRIIFKLFDKDPSHFPGTLRTEIYNWLAHSPSEMESYIRPGCVVLSVYASMSSAAWE 601

Query: 599  QLEGNLLQRINSLVQDSDSDFWRNARFLVHTGKQLASHKDGNIRVCKSWRTWSSPELISV 658
            QLE NLL R+NSLVQDSDSDFWRN RFLVHTG++LASHKDG IR+CKSWRTW+SPELISV
Sbjct: 602  QLEENLLHRVNSLVQDSDSDFWRNGRFLVHTGRELASHKDGKIRLCKSWRTWNSPELISV 661

Query: 659  SPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYDEIILAGLKI 718
            SPLAVVGGQE SF L+GRNL N GTKIHCT+MGGY S+EV     QG++YDEI     KI
Sbjct: 662  SPLAVVGGQETSFLLKGRNLANPGTKIHCTYMGGYTSKEVPGLARQGTVYDEISFGSFKI 721

Query: 719  QDTSPSVLGRFFIEVENGFKGNSFPVIIADATICKELSLLESEFGAEAKVCDVISEHQAH 778
             D  PSVLGR FIEVENGF+GNSFPVI+ADATICKEL LLESEF  EAKVCDVISE Q +
Sbjct: 722  NDAIPSVLGRCFIEVENGFRGNSFPVIVADATICKELRLLESEFDEEAKVCDVISEDQVY 781

Query: 779  EYGRPRSREEVLHFLNELGWLFQRKRASSIVKGSDYSLSRFKFLLVFSVDRGCCALVKAI 838
            + GRP SREEVLHFLNELGWLFQRK   S++ G DYSL+RFKFL  FSV+R CCALVK +
Sbjct: 782  DSGRPSSREEVLHFLNELGWLFQRK--FSMLAGPDYSLARFKFLFTFSVERDCCALVKTL 839

Query: 839  LDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 898
            LDILVE NL  DGLS +SLE L E+QLL+RAVK + R+MVDLLIHYS+ SS+   +KYIF
Sbjct: 840  LDILVERNLGSDGLSSKSLETLSEVQLLSRAVKRRYRKMVDLLIHYSVASSSS--KKYIF 897

Query: 899  PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKN 958
            PPNL G GGITPLHLAACT+ SDDIIDALT+DPQEIG  SWNS+LDASG SPY+YA+M+N
Sbjct: 898  PPNLVGAGGITPLHLAACTAGSDDIIDALTSDPQEIGLHSWNSLLDASGQSPYAYAMMRN 957

Query: 959  NHAYNKLVARKLADRRNGQVTIPVGVEIEQ--SGLAKEQVHGLSSQFKQRGKSCTKCAVA 1016
            NH+YN+LVARKLADRRNGQV++ +   +EQ    + +EQ       F Q   SC KCAV 
Sbjct: 958  NHSYNRLVARKLADRRNGQVSLSIENAMEQPWPKVGQEQ------HFGQGRSSCAKCAVV 1011

Query: 1017 AAKLNKRVRGSQGLLNRPYIHSMLAIAAVCVCVCLFLRGSPDIGLVAPFKWENLDFG 1073
            AAK ++R+ GSQGLL+RPYIHSMLAIAAVCVCVCLFLRGSPDIGLVAPFKWENLD+G
Sbjct: 1012 AAKYSRRMPGSQGLLHRPYIHSMLAIAAVCVCVCLFLRGSPDIGLVAPFKWENLDYG 1068

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255539362\|ref\|XP_002510746.1\| Squamosa promoter-binding protein, putative [Ricinus communis] gi\|223551447\|gb\|EEF52933.1\| Squamosa promoter-binding protein, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224065627\|ref\|XP_002301891.1\| predicted protein [Populus trichocarpa] gi\|222843617\|gb\|EEE81164.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297745623\|emb\|CBI40788.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449455740\|ref\|XP_004145609.1\| PREDICTED: squamosa promoter-binding-like protein 14-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449531663\|ref\|XP_004172805.1\| PREDICTED: LOW QUALITY PROTEIN: squamosa promoter-binding-like protein 14-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356574155\|ref\|XP_003555217.1\| PREDICTED: squamosa promoter-binding-like protein 14-like [Glycine max]	Back alignment and taxonomy information

>gi\|356523388\|ref\|XP_003530322.1\| PREDICTED: squamosa promoter-binding-like protein 14-like [Glycine max]	Back alignment and taxonomy information

>gi\|297845078\|ref\|XP_002890420.1\| hypothetical protein ARALYDRAFT_472338 [Arabidopsis lyrata subsp. lyrata] gi\|297336262\|gb\|EFH66679.1\| hypothetical protein ARALYDRAFT_472338 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi|15218091|ref|NP_173522.1| squamosa promoter binding-like protein 14 [Arabidopsis thaliana] gi|67461574|sp|Q8RY95.3|SPL14_ARATH RecName: Full=Squamosa promoter-binding-like protein 14; AltName: Full=Protein FUMONISIN B1-RESISTANT 6; AltName: Full=SPL1-related protein 2 gi|4836890|gb|AAD30593.1|AC007369_3 Unknown protein [Arabidopsis thaliana] gi|332191929|gb|AEE30050.1| squamosa promoter binding-like protein 14 [Arabidopsis thaliana]

Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1075
TAIR\|locus:2037355		1035	SPL14 "squamosa promoter bindi	0.870	0.904	0.555	4.8e-280
TAIR\|locus:2011706		988	AT1G76580 [Arabidopsis thalian	0.860	0.936	0.526	1.8e-251
TAIR\|locus:2041329		881	SPL1 "squamosa promoter bindin	0.498	0.608	0.324	3.5e-109
TAIR\|locus:2101402		927	SPL12 "squamosa promoter-bindi	0.472	0.548	0.343	5.7e-107
TAIR\|locus:2159717		359	SPL13A "SQUAMOSA PROMOTER-BIND	0.097	0.292	0.485	7.6e-23
TAIR\|locus:2832472		359	SPL13B "SQUAMOSA PROMOTER-BIND	0.097	0.292	0.485	7.6e-23
TAIR\|locus:504956101		333	SPL8 "squamosa promoter bindin	0.074	0.240	0.578	5.9e-20
TAIR\|locus:2087105		181	SPL5 "squamosa promoter bindin	0.073	0.436	0.569	2e-19
TAIR\|locus:2016014		396	SPL10 "squamosa promoter bindi	0.083	0.227	0.521	5.9e-18
TAIR\|locus:2009675		174	SPL4 "squamosa promoter bindin	0.068	0.425	0.569	6.3e-18

TAIR\|locus:2037355 SPL14 "squamosa promoter binding protein-like 14" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2629 (930.5 bits), Expect = 4.8e-280, Sum P(2) = 4.8e-280
 Identities = 535/963 (55%), Positives = 674/963 (69%)

Query:   117 VEQPEPPVVTSKPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTK 176
             VE+        +PNK+VRSGSPG   YPMCQVDNC EDLS+AKDYHRRHKVCE+HSK+TK
Sbjct:    92 VEETTTTTQNVRPNKKVRSGSPG-GNYPMCQVDNCTEDLSHAKDYHRRHKVCEVHSKATK 150

Query:   177 ALVGKQMQRFCQQCSRFHPLSEFDEGKRSCXXXXXXXXXXXXKT-QPEDITSRMLIHG-H 234
             ALVGKQMQRFCQQCSRFH LSEFDEGKRSC            KT QPE++ S +++ G H
Sbjct:   151 ALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRRRKTTQPEEVASGVVVPGNH 210

Query:   235 GNQSNNPTANVDIVNLLTALARAQGKTEDRS-ISCSSVPDREQLLMILSKINSLPLPADL 293
                +N   AN+D++ LLTALA AQGK   +  +   +VPDREQLL IL+KIN+LPLP DL
Sbjct:   211 DTTNNTANANMDLMALLTALACAQGKNAVKPPVGSPAVPDREQLLQILNKINALPLPMDL 270

Query:   294 AAKLHNFGSLNRKTPVHTSTDVQNRLNENTSSPSTMDLLAVLSSTLTAPSPDTLAAHXXX 353
              +KL+N GSL RK   H + + QN +N   +SPSTMDLLAVLS+TL + SPD LA     
Sbjct:   271 VSKLNNIGSLARKNMDHPTVNPQNDMNG--ASPSTMDLLAVLSTTLGSSSPDALAILSQG 328

Query:   354 XXXXXXXXXXXXXCPEQATPNFLKRTTMDFPSVGGERSSTSYQSPVEDSDGQNQETRVNL 413
                            E      L++ T  F SVGGERSS+S QSP +DSD + Q+TR +L
Sbjct:   329 GFGNKDSEKTKLSSYENGVTTNLEKRTFGFSSVGGERSSSSNQSPSQDSDSRGQDTRSSL 388

Query:   414 PLQLFSSSPEDDSPPKLXXXXXXXXXXXXNPIEERSPSSSPVVQTFFPMQSTSETVKSEK 473
              LQLF+SSPED+S P +            NP+E+RSPSSSPV+Q  FP+Q++ ET++S+ 
Sbjct:   389 SLQLFTSSPEDESRPTVASSRKYYSSASSNPVEDRSPSSSPVMQELFPLQASPETMRSK- 447

Query:   474 LSIGREVNANVEGNRSRGSIMPLELFRGSNKAADNCSFQSFPYQAGYTXXXXXXXXXXXX 533
                      N + +  R   +PLELF  SN+ A + +F+ F  Q+GY             
Sbjct:   448 ---------NHKNSSPRTGCLPLELFGASNRGAADPNFKGFGQQSGYASSGSDYSPPSLN 498

Query:   534 XXDAQDCTGRIIFKLFDKDPSQFPGTLRKEIYNWLSNSPSEMESYIRPGCVILSLYVSMP 593
               DAQD TG+I+FKL DKDPSQ PGTLR EIYNWLSN PSEMESYIRPGCV+LS+YV+M 
Sbjct:   499 S-DAQDRTGKIVFKLLDKDPSQLPGTLRSEIYNWLSNIPSEMESYIRPGCVVLSVYVAMS 557

Query:   594 YATWEQLEGNLLQRINSLVQDSDSDFWRNARFLVHTGKQLASHKDGNIRVCKSWRTWSSP 653
              A WEQLE  LLQR+  L+Q+S SDFWRNARF+V+TG+QLASHK+G +R  KSWRTW+SP
Sbjct:   558 PAAWEQLEQKLLQRLGVLLQNSPSDFWRNARFIVNTGRQLASHKNGKVRCSKSWRTWNSP 617

Query:   654 ELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYDEIIL 713
             ELISVSP+AVV G+E S  +RGR+LTN G  I CT MG Y + EVT + C+ +I+DE+ +
Sbjct:   618 ELISVSPVAVVAGEETSLVVRGRSLTNDGISIRCTHMGSYMAMEVTRAVCRQTIFDELNV 677

Query:   714 AGLKIQDTSPSVLGRFFIEVENGFKGNSFPVIIADATICKELSLLESEFGAEAKVCDVIS 773
                K+Q+  P  LGR FIEVENGF+G+SFP+IIA+A+ICKEL+ L  EF  +++  D+ +
Sbjct:   678 NSFKVQNVHPGFLGRCFIEVENGFRGDSFPLIIANASICKELNRLGEEFHPKSQ--DM-T 734

Query:   774 EHQAHEYGR-PRSREEVLHFLNELGWLFQRKRASSIVKGSDYSLSRFKFLLVFSVDRGCC 832
             E QA    R P SREEVL FLNELGWLFQ+ + S + + SD+SL+RFKFLLV SV+R  C
Sbjct:   735 EEQAQSSNRGPTSREEVLCFLNELGWLFQKNQTSELREQSDFSLARFKFLLVCSVERDYC 794

Query:   833 ALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSN-D 891
             AL++ +LD+LVE NL  D L+RE+L+ML EIQLLNRAVK K  +MV+LLIHY +      
Sbjct:   795 ALIRTLLDMLVERNLVNDELNREALDMLAEIQLLNRAVKRKSTKMVELLIHYLVNPLTLS 854

Query:   892 TPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPY 951
             + +K++F PN+ GPGGITPLHLAACTS SDD+ID LTNDPQEIG SSWN++ DA+G +PY
Sbjct:   855 SSRKFVFLPNITGPGGITPLHLAACTSGSDDMIDLLTNDPQEIGLSSWNTLRDATGQTPY 914

Query:   952 SYALMKNNHAYNKLVARKLADRRNGQVTIPVGVEI-EQSGLAKEQVHGLSSQFKQRGKSC 1010
             SYA ++NNH YN LVARKLAD+RN QV++ +  E+ +Q+GL+K     LS +  +   SC
Sbjct:   915 SYAAIRNNHNYNSLVARKLADKRNKQVSLNIEHEVVDQTGLSKR----LSLEMNKSSSSC 970

Query:  1011 TKCAVAAAKLNKRVRGSQGLLNRPYIHSMLAIAAVCVCVCLFLRGSPDIGLVAPFKWENL 1070
               CA  A K  +RV GSQ L   P IHSMLA+A VCVCVC+F+   P +   + F W  L
Sbjct:   971 ASCATVALKYQRRVSGSQRLFPTPIIHSMLAVATVCVCVCVFMHAFPIVRQGSHFSWGGL 1030

Query:  1071 DFG 1073
             D+G
Sbjct:  1031 DYG 1033

GO:0003677 "DNA binding" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

TAIR\|locus:2011706 AT1G76580 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2041329 SPL1 "squamosa promoter binding protein-like 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2101402 SPL12 "squamosa promoter-binding protein-like 12" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2159717 SPL13A "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13A" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2832472 SPL13B "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13B" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:504956101 SPL8 "squamosa promoter binding protein-like 8" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2087105 SPL5 "squamosa promoter binding protein-like 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2016014 SPL10 "squamosa promoter binding protein-like 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2009675 SPL4 "squamosa promoter binding protein-like 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6Z8M8	SPL15_ORYSJ	No assigned EC number	0.4757	0.9506	0.8964	yes	no
Q8RY95	SPL14_ARATH	No assigned EC number	0.5618	0.9339	0.9700	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pm.C_LG_II000008	hypothetical protein (1044 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1075
pfam03110		79	pfam03110, SBP, SBP domain	1e-52

>gnl\|CDD\|190527 pfam03110, SBP, SBP domain	Back alignment and domain information

 Score =  177 bits (452), Expect = 1e-52
 Identities = 61/79 (77%), Positives = 65/79 (82%)

Query: 145 MCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKR 204
            CQV+ C  DLSNAKDYHRRHKVCE+HSK+   LV    QRFCQQCSRFH LSEFDEGKR
Sbjct: 1   RCQVEGCGADLSNAKDYHRRHKVCEVHSKAPVVLVSGLEQRFCQQCSRFHLLSEFDEGKR 60

Query: 205 SCRRRLAGHNRRRRKTQPE 223
           SCRRRLAGHN RRRK QP+
Sbjct: 61  SCRRRLAGHNERRRKPQPD 79

SBP domains (for SQUAMOSA-pROMOTER BINDING PROTEIN) are found in plant proteins. It is a sequence specific DNA-binding domain. Members of family probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands. Length = 79

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1075
PF03110		79	SBP: SBP domain; InterPro: IPR004333 The SBP plant	100.0
KOG4412		226	consensus 26S proteasome regulatory complex, subun	99.81
PHA02741		169	hypothetical protein; Provisional	99.74
PHA02791		284	ankyrin-like protein; Provisional	99.73
KOG4412		226	consensus 26S proteasome regulatory complex, subun	99.72
PHA02743		166	Viral ankyrin protein; Provisional	99.71
PHA02859		209	ankyrin repeat protein; Provisional	99.7
PHA02875		413	ankyrin repeat protein; Provisional	99.7
PHA02791		284	ankyrin-like protein; Provisional	99.7
KOG0509		600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.69
PHA02736		154	Viral ankyrin protein; Provisional	99.68
PHA02859		209	ankyrin repeat protein; Provisional	99.68
PHA02878		477	ankyrin repeat protein; Provisional	99.68
PHA02874		434	ankyrin repeat protein; Provisional	99.67
PHA02875		413	ankyrin repeat protein; Provisional	99.67
PHA02878		477	ankyrin repeat protein; Provisional	99.67
PHA02874		434	ankyrin repeat protein; Provisional	99.66
KOG0509		600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.63
PHA02795		437	ankyrin-like protein; Provisional	99.62
PHA03100		480	ankyrin repeat protein; Provisional	99.62
PHA03100		480	ankyrin repeat protein; Provisional	99.61
PLN03192		823	Voltage-dependent potassium channel; Provisional	99.6
PHA02876		682	ankyrin repeat protein; Provisional	99.59
PHA02884		300	ankyrin repeat protein; Provisional	99.59
PHA02989		494	ankyrin repeat protein; Provisional	99.59
PHA03095		471	ankyrin-like protein; Provisional	99.57
KOG0510		929	consensus Ankyrin repeat protein [General function	99.57
PHA02795		437	ankyrin-like protein; Provisional	99.57
PHA02716		764	CPXV016; CPX019; EVM010; Provisional	99.56
KOG0514		452	consensus Ankyrin repeat protein [General function	99.56
PHA03095		471	ankyrin-like protein; Provisional	99.56
PHA02876		682	ankyrin repeat protein; Provisional	99.56
PHA02716		764	CPXV016; CPX019; EVM010; Provisional	99.56
KOG4177		1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.56
PHA02989		494	ankyrin repeat protein; Provisional	99.56
PHA02946		446	ankyin-like protein; Provisional	99.56
PHA02946		446	ankyin-like protein; Provisional	99.55
PHA02798		489	ankyrin-like protein; Provisional	99.55
PF12796		89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.54
KOG0510		929	consensus Ankyrin repeat protein [General function	99.54
KOG0512		228	consensus Fetal globin-inducing factor (contains a	99.53
PHA02798		489	ankyrin-like protein; Provisional	99.51
PHA02741		169	hypothetical protein; Provisional	99.51
KOG0195		448	consensus Integrin-linked kinase [Signal transduct	99.5
PHA02917		661	ankyrin-like protein; Provisional	99.49
KOG0514		452	consensus Ankyrin repeat protein [General function	99.46
PF12796		89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.46
KOG0502		296	consensus Integral membrane ankyrin-repeat protein	99.44
KOG0508		615	consensus Ankyrin repeat protein [General function	99.44
PHA02730		672	ankyrin-like protein; Provisional	99.43
PHA02917		661	ankyrin-like protein; Provisional	99.42
PHA02730		672	ankyrin-like protein; Provisional	99.42
KOG4177		1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.41
PHA02743		166	Viral ankyrin protein; Provisional	99.4
PHA02884		300	ankyrin repeat protein; Provisional	99.4
KOG0502		296	consensus Integral membrane ankyrin-repeat protein	99.39
cd00204		126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.38
COG0666		235	Arp FOG: Ankyrin repeat [General function predicti	99.37
KOG0508		615	consensus Ankyrin repeat protein [General function	99.37
PHA02792		631	ankyrin-like protein; Provisional	99.35
PHA02736		154	Viral ankyrin protein; Provisional	99.35
TIGR00870		743	trp transient-receptor-potential calcium channel p	99.34
KOG0512		228	consensus Fetal globin-inducing factor (contains a	99.33
TIGR00870		743	trp transient-receptor-potential calcium channel p	99.33
KOG0505		527	consensus Myosin phosphatase, regulatory subunit [	99.33
PHA02792		631	ankyrin-like protein; Provisional	99.32
PLN03192		823	Voltage-dependent potassium channel; Provisional	99.32
KOG0195		448	consensus Integrin-linked kinase [Signal transduct	99.32
cd00204		126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.26
PTZ00322		664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.21
KOG0507		854	consensus CASK-interacting adaptor protein (caskin	99.18
PF13637		54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.16
PF13857		56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.15
KOG0507		854	consensus CASK-interacting adaptor protein (caskin	99.12
COG0666		235	Arp FOG: Ankyrin repeat [General function predicti	99.09
PF13637		54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.06
KOG1710		396	consensus MYND Zn-finger and ankyrin repeat protei	99.03
PTZ00322		664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.02
KOG0505		527	consensus Myosin phosphatase, regulatory subunit [	99.01
KOG4214		117	consensus Myotrophin and similar proteins [Transcr	98.99
KOG3676		782	consensus Ca2+-permeable cation channel OSM-9 and	98.96
KOG0515		752	consensus p53-interacting protein 53BP/ASPP, conta	98.95
KOG4214		117	consensus Myotrophin and similar proteins [Transcr	98.88
PF13857		56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	98.84
KOG0515		752	consensus p53-interacting protein 53BP/ASPP, conta	98.83
KOG3676		782	consensus Ca2+-permeable cation channel OSM-9 and	98.82
KOG0818		669	consensus GTPase-activating proteins of the GIT fa	98.66
KOG4369		2131	consensus RTK signaling protein MASK/UNC-44 [Signa	98.65
KOG4369		2131	consensus RTK signaling protein MASK/UNC-44 [Signa	98.43
KOG1710		396	consensus MYND Zn-finger and ankyrin repeat protei	98.38
KOG0705		749	consensus GTPase-activating protein Centaurin gamm	98.25
KOG0782		1004	consensus Predicted diacylglycerol kinase [Signal	98.22
KOG0522		560	consensus Ankyrin repeat protein [General function	98.1
KOG0520		975	consensus Uncharacterized conserved protein, conta	98.06
KOG0506		622	consensus Glutaminase (contains ankyrin repeat) [A	97.97
PF00023		33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	97.96
PF13606		30	Ank_3: Ankyrin repeat	97.95
PF00023		33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	97.92
KOG0521		785	consensus Putative GTPase activating proteins (GAP	97.83
KOG3609		822	consensus Receptor-activated Ca2+-permeable cation	97.81
KOG0783		1267	consensus Uncharacterized conserved protein, conta	97.78
KOG0705		749	consensus GTPase-activating protein Centaurin gamm	97.69
PF13606		30	Ank_3: Ankyrin repeat	97.6
KOG0818		669	consensus GTPase-activating proteins of the GIT fa	97.57
KOG0522		560	consensus Ankyrin repeat protein [General function	97.56
KOG0783		1267	consensus Uncharacterized conserved protein, conta	97.4
KOG2384		223	consensus Major histocompatibility complex protein	97.18
KOG0520		975	consensus Uncharacterized conserved protein, conta	96.98
KOG0782		1004	consensus Predicted diacylglycerol kinase [Signal	96.53
KOG0506		622	consensus Glutaminase (contains ankyrin repeat) [A	96.51
KOG0521		785	consensus Putative GTPase activating proteins (GAP	96.42
KOG0511		516	consensus Ankyrin repeat protein [General function	95.46
KOG2505		591	consensus Ankyrin repeat protein [General function	95.27
KOG2505		591	consensus Ankyrin repeat protein [General function	94.88
smart00248		30	ANK ankyrin repeats. Ankyrin repeats are about 33	94.54
smart00248		30	ANK ankyrin repeats. Ankyrin repeats are about 33	93.96
KOG2384		223	consensus Major histocompatibility complex protein	92.44
KOG3609		822	consensus Receptor-activated Ca2+-permeable cation	92.28
KOG0511		516	consensus Ankyrin repeat protein [General function	91.77

>PF03110 SBP: SBP domain; InterPro: IPR004333 The SBP plant protein domain is a sequence specific DNA-binding domain []	Back alignment and domain information

Probab=100.00  E-value=3.9e-35  Score=264.61  Aligned_cols=78  Identities=65%  Similarity=1.119  Sum_probs=63.1

Q ss_pred             CcccCCChhhhhcccccccccccchhhcCCceeeeCCccchHhHhhccCCCCCCcccccchHHHHHhhHHhhhccCCC
Q 001453          145 MCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP  222 (1075)
Q Consensus       145 ~CqV~gC~~dL~~~k~Y~~R~rvCe~H~ka~~v~~~G~~~RFCQQC~rfH~l~eFd~~krSCr~~L~~hn~RRrk~~~  222 (1075)
                      +||||||++||+.+|.||+||||||.|+||++|+++|.++||||||+|||+|+||||+|||||++|++||+||||.++
T Consensus         1 ~CqV~gC~~dL~~~k~Y~rR~rICe~H~ka~~V~~~G~~~RFCQQC~rfh~l~eFdg~kRSCr~~L~~h~~RRr~~~~   78 (79)
T PF03110_consen    1 RCQVDGCGADLSGAKEYHRRYRICEEHAKAPVVVVDGVEQRFCQQCGRFHPLSEFDGGKRSCRARLARHNERRRKRQQ   78 (79)
T ss_dssp             C-SSTTEE-EETS--SSCCCTT--HHHHTHSEEEETTEEEEE-TTTSSEEETTCB-SSTTSBSTTTT-SSS---S-S-
T ss_pred             CCcCCCCCcchhhhHHHhhccCcchhhcCCCeEEECChhHHHHHHHHcCCCHHHHcchhhhHHHHHHHHHHHhccccC
Confidence            599999999999999999999999999999999999999999999999999999999999999999999999999865

Proteins with this domain probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands.; GO: 0003677 DNA binding, 0005634 nucleus; PDB: 1UL4_A 1WJ0_A 1UL5_A.

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PHA02741 hypothetical protein; Provisional	Back alignment and domain information

>PHA02791 ankyrin-like protein; Provisional	Back alignment and domain information

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PHA02743 Viral ankyrin protein; Provisional	Back alignment and domain information

>PHA02859 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02875 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02791 ankyrin-like protein; Provisional	Back alignment and domain information

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]	Back alignment and domain information

>PHA02736 Viral ankyrin protein; Provisional	Back alignment and domain information

>PHA02859 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02878 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02874 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02875 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02878 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02874 ankyrin repeat protein; Provisional	Back alignment and domain information

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]	Back alignment and domain information

>PHA02795 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA03100 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA03100 ankyrin repeat protein; Provisional	Back alignment and domain information

>PLN03192 Voltage-dependent potassium channel; Provisional	Back alignment and domain information

>PHA02876 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02884 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02989 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA03095 ankyrin-like protein; Provisional	Back alignment and domain information

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>PHA02795 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02716 CPXV016; CPX019; EVM010; Provisional	Back alignment and domain information

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>PHA03095 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02876 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02716 CPXV016; CPX019; EVM010; Provisional	Back alignment and domain information

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PHA02989 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02946 ankyin-like protein; Provisional	Back alignment and domain information

>PHA02946 ankyin-like protein; Provisional	Back alignment and domain information

>PHA02798 ankyrin-like protein; Provisional	Back alignment and domain information

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain	Back alignment and domain information

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]	Back alignment and domain information

>PHA02798 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02741 hypothetical protein; Provisional	Back alignment and domain information

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]	Back alignment and domain information

>PHA02917 ankyrin-like protein; Provisional	Back alignment and domain information

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain	Back alignment and domain information

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]	Back alignment and domain information

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>PHA02730 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02917 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02730 ankyrin-like protein; Provisional	Back alignment and domain information

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PHA02743 Viral ankyrin protein; Provisional	Back alignment and domain information

>PHA02884 ankyrin repeat protein; Provisional	Back alignment and domain information

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]	Back alignment and domain information

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins	Back alignment and domain information

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]	Back alignment and domain information

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>PHA02792 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02736 Viral ankyrin protein; Provisional	Back alignment and domain information

>TIGR00870 trp transient-receptor-potential calcium channel protein	Back alignment and domain information

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]	Back alignment and domain information

>TIGR00870 trp transient-receptor-potential calcium channel protein	Back alignment and domain information

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]	Back alignment and domain information

>PHA02792 ankyrin-like protein; Provisional	Back alignment and domain information

>PLN03192 Voltage-dependent potassium channel; Provisional	Back alignment and domain information

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]	Back alignment and domain information

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins	Back alignment and domain information

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional	Back alignment and domain information

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]	Back alignment and domain information

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A	Back alignment and domain information

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A	Back alignment and domain information

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]	Back alignment and domain information

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]	Back alignment and domain information

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A	Back alignment and domain information

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional	Back alignment and domain information

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]	Back alignment and domain information

>KOG4214 consensus Myotrophin and similar proteins [Transcription]	Back alignment and domain information

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG4214 consensus Myotrophin and similar proteins [Transcription]	Back alignment and domain information

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A	Back alignment and domain information

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]	Back alignment and domain information

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]	Back alignment and domain information

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]	Back alignment and domain information

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]	Back alignment and domain information

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]	Back alignment and domain information

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]	Back alignment and domain information

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]	Back alignment and domain information

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature	Back alignment and domain information

>PF13606 Ank_3: Ankyrin repeat	Back alignment and domain information

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature	Back alignment and domain information

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]	Back alignment and domain information

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]	Back alignment and domain information

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]	Back alignment and domain information

>PF13606 Ank_3: Ankyrin repeat	Back alignment and domain information

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]	Back alignment and domain information

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]	Back alignment and domain information

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]	Back alignment and domain information

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]	Back alignment and domain information

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]	Back alignment and domain information

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]	Back alignment and domain information

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]	Back alignment and domain information

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>smart00248 ANK ankyrin repeats	Back alignment and domain information

>smart00248 ANK ankyrin repeats	Back alignment and domain information

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]	Back alignment and domain information

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		1075
1wj0_A		60	Solution Structure Of The Dna-Binding Domain Of Squ		2e-22
1ul4_A		94	Solution Structure Of The Dna-Binding Domain Of Squ		9e-21
1ul5_A		88	Solution Structure Of The Dna-binding Domain Of Squ		2e-13

>pdb|1WJ0|A Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 12 Lacking The Second Zinc- Binding Site Length = 60

Back alignment and structure

Iteration: 1
 Score =  105 bits (261), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/55 (80%), Positives = 46/55 (83%)
Query: 146 CQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFD 200
           CQVDNC  DLS  KDYHRRHKVCE+HSK+T ALVG  MQRFCQQCSRFH L EFD
Sbjct: 6   CQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60

PyMOL of 1wj0

>pdb|1UL4|A Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 4 Length = 94

Back alignment and structure

>pdb|1UL5|A Chain A, Solution Structure Of The Dna-binding Domain Of Squamosa Promoter Binding Protein-like 7 Length = 88

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1075
1ul4_A		94	SPL4, squamosa promoter binding protein-like 4; tr	5e-42
1ul5_A		88	SPL7, squamosa promoter binding protein-like 7; tr	4e-39
1wj0_A		60	Squamosa promoter-binding protein-like 12; DNA-bin	7e-33
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-08

>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 94	Back alignment and structure

 Score =  147 bits (373), Expect = 5e-42
 Identities = 56/93 (60%), Positives = 66/93 (70%)

Query: 136 GSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHP 195
           GS G++   +CQVD C  D+  AK YHRRHKVCE+H+K++   +    QRFCQQCSRFH 
Sbjct: 1   GSSGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHD 60

Query: 196 LSEFDEGKRSCRRRLAGHNRRRRKTQPEDITSR 228
           L EFDE KRSCRRRLAGHN RRRK+  E   S 
Sbjct: 61  LQEFDEAKRSCRRRLAGHNERRRKSSGESGPSS 93

PyMOL of 1ul4

>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 88	Back alignment and structure

>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1 Length = 60	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 61.8 bits (149), Expect = 1e-09
 Identities = 75/541 (13%), Positives = 148/541 (27%), Gaps = 184/541 (34%)

Query: 535 SDAQDCTGRIIF-------KLFD-KDPSQFP-GTLRKEIYNWLSNSPSEMESYIRPGCVI 585
            + Q     I+          FD KD    P   L KE  + +  S   +   +R    +
Sbjct: 12  GEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR----L 67

Query: 586 LSLYVSMPYATWEQLEGNLLQRINSLVQDSDSDFWRNARFLVHTGKQLASHKDGNIRVCK 645
               +S      ++    +L+               N +FL+   K          R+  
Sbjct: 68  FWTLLSKQEEMVQKFVEEVLRI--------------NYKFLMSPIKTEQRQPSMMTRMYI 113

Query: 646 SWR--TWSSPELISVSPLAVVGGQELSFKLRGRNLTNL----GTKIHCTFMGGYASQEVT 699
             R   ++  ++ +     V   Q    KLR + L  L       I    + G     V 
Sbjct: 114 EQRDRLYNDNQVFA--KYNVSRLQPYL-KLR-QALLELRPAKNVLIDG--VLGSGKTWVA 167

Query: 700 SSTCQGSIYDEIILAGLKIQDTSPSVLGRFFIEVENGFKGNSFPVIIADATICKELSLLE 759
              C             K+Q         F++ ++N     +  V+     +      ++
Sbjct: 168 LDVCL----SY------KVQCKMDF--KIFWLNLKNCNSPET--VLEMLQKLL---YQID 210

Query: 760 SEFGAEAKVCDVISEHQAHEYGRPRSREEVLHFLNELGWLFQRKRASSIVKGSDYSLSRF 819
             + + +           H          +   L  L  L  +   +             
Sbjct: 211 PNWTSRSD----------HSSNIKLRIHSIQAELRRL--LKSKPYENC------------ 246

Query: 820 KFLLV------------FSVDRGCCALV----KAILDIL---VEGNLSMD----GLS-RE 855
             LLV            F  +  C  L+    K + D L      ++S+D     L+  E
Sbjct: 247 --LLVLLNVQNAKAWNAF--NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE 302

Query: 856 SLEML--W----------EIQLLN-RAVKM---KCRRMVDLLIHY--------------S 885
              +L  +          E+   N R + +     R  +    ++              S
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362

Query: 886 LT--SSNDTPQKY----IFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSW 939
           L      +  + +    +FPP+      I  + L+    D         +D   +     
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAH----IPTILLSLIWFDVI------KSDVMVV----- 407

Query: 940 NSILDASGHSPYSYALMKNNHAYNKLVARKLADRRN--GQVTIP-VGVEIEQSGLAKEQV 996
                                  NKL    L +++     ++IP + +E++     +  +
Sbjct: 408 ----------------------VNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL 445

Query: 997 H 997
           H
Sbjct: 446 H 446

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		1075
d1ul4a_		81	g.72.1.1 (A:) Squamosa promoter binding protein-li	3e-46
d1ul5a_		86	g.72.1.1 (A:) Squamosa promoter binding protein-li	6e-46
d1wj0a_		58	g.72.1.1 (A:) Squamosa-promoter binding-like prote	1e-32

>d1ul4a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 4, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 81	Back information, alignment and structure


class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 4, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  157 bits (399), Expect = 3e-46
 Identities = 52/80 (65%), Positives = 60/80 (75%)

Query: 144 PMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGK 203
            +CQVD C  D+  AK YHRRHKVCE+H+K++   +    QRFCQQCSRFH L EFDE K
Sbjct: 2   RLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAK 61

Query: 204 RSCRRRLAGHNRRRRKTQPE 223
           RSCRRRLAGHN RRRK+  E
Sbjct: 62  RSCRRRLAGHNERRRKSSGE 81

PyMOL of d1ul4a_

>d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 86	Back information, alignment and structure

>d1wj0a_ g.72.1.1 (A:) Squamosa-promoter binding-like protein 12, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 58	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1075
d1ul5a_		86	Squamosa promoter binding protein-like 7, DNA-bind	99.98
d1ul4a_		81	Squamosa promoter binding protein-like 4, DNA-bind	99.98
d1wj0a_		58	Squamosa-promoter binding-like protein 12, DNA-bin	99.89
d2fo1e1		277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.81
d1dcqa1		154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.8
d1oy3d_		255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.78
d1n11a_		408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.77
d1oy3d_		255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.75
d1uoha_		223	26S proteasome non-ATPase regulatory subunit 10, g	99.75
d1awcb_		153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.74
d1s70b_		291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.74
d1ot8a_		209	Neurogenic locus notch receptor domain {Fruit fly	99.73
d1ixva_		229	26S proteasome non-ATPase regulatory subunit 10, g	99.73
d1uoha_		223	26S proteasome non-ATPase regulatory subunit 10, g	99.72
d1k1aa_		228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.72
d1bi7b_		125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.72
d1bd8a_		156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.71
d1ycsb1		130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.71
d1myoa_		118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.68
d1ihba_		156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.68
d1n11a_		408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.68
d1wdya_		285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.67
d1ycsb1		130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.67
d1myoa_		118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.66
d2ajaa1		346	Hypothetical protein LPG2416 {Legionella pneumophi	99.63
d1ixva_		229	26S proteasome non-ATPase regulatory subunit 10, g	99.63
d1sw6a_		301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.62
d1ot8a_		209	Neurogenic locus notch receptor domain {Fruit fly	99.61
d1iknd_		221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.6
d1sw6a_		301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.56
d2ajaa1		346	Hypothetical protein LPG2416 {Legionella pneumophi	99.56
d2fo1e1		277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.55
d1k1aa_		228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.53
d1iknd_		221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.5
d1bi7b_		125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.48
d1s70b_		291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.46
d1awcb_		153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.44
d1ihba_		156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.38
d1dcqa1		154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.37
d1wdya_		285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.34
d1bd8a_		156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.09

>d1ul5a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 7, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

class: Small proteins
fold: SBT domain
superfamily: SBT domain
family: SBT domain
domain: Squamosa promoter binding protein-like 7, DNA-binding domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.98  E-value=1.6e-35  Score=254.71  Aligned_cols=84  Identities=43%  Similarity=0.884  Sum_probs=81.2

Q ss_pred             CCCCCCCCCHHHHHCCCCCCCCCCCCHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf             99742379745530250000212542011187643148940037675105778887566621189997567764216899
Q 001453          143 YPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP  222 (1075)
Q Consensus       143 ~~~CqV~gC~~dL~~~k~Y~~R~rvCe~H~ka~~v~~~G~~~RFCQQC~rfH~L~eFd~~krSCr~~L~~hn~RRrk~~~  222 (1075)
                      .++||||||++||+.+|+||+||||||.|+||++|+++|+++||||||+|||+|+|||++|||||++|++||.||||++|
T Consensus         1 ~~rCqV~gC~~dls~~k~Y~rRhrvCe~H~ka~~V~v~G~~~RfCQqC~rFH~L~eFD~~krSCr~rL~~hn~RRRk~~~   80 (86)
T d1ul5a_           1 VARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKPV   80 (86)
T ss_dssp             CCSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCSC
T ss_pred             CCEEEECCCCCHHHHCHHHHHHHHHHHHHCCCCEEEECCEECHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf             98446178864155477862106999986499869899965168887526367666536541099999888887635995


Q ss_pred             CCCC
Q ss_conf             4100
Q 001453          223 EDIT  226 (1075)
Q Consensus       223 ~~~~  226 (1075)
                      ++++
T Consensus        81 ~~~g   84 (86)
T d1ul5a_          81 DKGG   84 (86)
T ss_dssp             SSCC
T ss_pred             CCCC
T ss_conf             3223

PyMOL of d1ul5a_

>d1ul4a_ g.72.1.1 (A:) Squamosa promoter binding protein-like 4, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1wj0a_ g.72.1.1 (A:) Squamosa-promoter binding-like protein 12, DNA-binding domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	Back information, alignment and structure

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}	Back information, alignment and structure

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}	Back information, alignment and structure

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}	Back information, alignment and structure

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}	Back information, alignment and structure

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	Back information, alignment and structure

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure