Citrus Sinensis ID: 001563

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050--
MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKQLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRVK
cccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHccccHHHcHHcHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHcHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcc
MESLAQLEALCERLYNS*****RAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARM**GDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKQLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRV*
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MESxxxxxxxxxxxxxxxxxxxxxHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKQLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRVK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Ran-binding protein 16 May function as a nuclear transport receptor.probableQ9GQN0
Exportin-7 Mediates the nuclear export of proteins (cargos) with broad substrate specificity. In the nucleus binds cooperatively to its cargo and to the GTPase Ran in its active GTP-bound form. Docking of this trimeric complex to the nuclear pore complex (NPC) is mediated through binding to nucleoporins. Upon transit of a nuclear export complex into the cytoplasm, disassembling of the complex and hydrolysis of Ran-GTP to Ran-GDP (induced by RANBP1 and RANGAP1, respectively) cause release of the cargo from the export receptor. XPO7 then return to the nuclear compartment and mediate another round of transport. The directionality of nuclear export is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus.probableQ9EPK7
Exportin-7 Mediates the nuclear export of proteins (cargos) with broad substrate specificity.probableQ5ZLT0

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3M1I, chain C
Confidence level:probable
Coverage over the Query: 3-218,240-553,576-834,845-939,952-1049
View the alignment between query and template
View the model in PyMOL
Template: 3GJX, chain A
Confidence level:probable
Coverage over the Query: 3-211,234-417,434-834,845-926
View the alignment between query and template
View the model in PyMOL