Citrus Sinensis ID: 001563

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050--

MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKQLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRVK

cccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHccccHHHcHHcHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHcHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcc

cHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccccccccccEEcccHcHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHccHHHHHHHHHHHHHHHHcccHHHccccccHHHHHHHHHHHHHHHHHHHcHHHHccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHEccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccHHHccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccEcccEEEccccHHHHHHHHHHHHHHccccHHHHHHcHHHHHHHHHHHHHHHHHcHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccc

MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLtkfgwfdddrFRDLVKESTNFLSQATSDHYAIGLKILNQLVSemnqpnpglpsthhrrvacsfrdqSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKClsfdfvgtsidesseefgtvqipsawrpvledpstlqIFFDYyaiteaplSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQtgqgladhdnYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVtsvpylkgdapslldefvpkiTEGFITsrfnsvqagfpddlsdnpldNVELLQDQLdcfpylcrfqyensglyiINTMEPILQSYTERarmqtgdkseISVIEAKLAWIVHIIAAIVKIKqctgcslesQEVLDAELSARVLQLINVtdsglhsqrYCELSKQRLDRAILTFFQHFrksyvgdqamHSSKQLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANhtrehfpfleeyrcsrsrttfyYTIGWLIfmeespvkfkssmdPLLQVFISLestpdsmfrTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFdwlypahmplllkgishwtdtpevttPLLKFMAEFVLNKAqrltfdssspngiLLFREVSKLIVAYGSrvlslpnaadiyaYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLesglkgldtniSSQCAAAVDNLAAFYfnnitmgeaptspaaINLARHivecptlfPEILKTLFEIVLFedcgnqwslsrpMLSLILISEQVFSDLKAqiltsqpvdqhqrLSVCFDKLMADVARSldsknrdkFTQNLTVFRHEFRVK

MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFgtvqipsawrpvleDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINvtdsglhsqRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKQLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHtrehfpfleeyrcsrsrTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISlestpdsmfRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQrltfdssspnGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVArsldsknrdkftqnltvfrhefrvk

MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWivhiiaaivkikQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKQLYARlsellglhdhllllNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRVK

*********LCERLYN******RAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVS**************RRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARM**GDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKQLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVAR************NLTVF*******

MESLAQLEALCERLYNS******AHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQS****************VIEAKLAWIVHIIAAIVKIK************LDAELSARVLQLINVTDS*************RLDRAILTFFQHFRKSYVGDQAMHSSKQLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLEST*****RTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLP***DIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNN**************LARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRV*

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MESxxxxxxxxxxxxxxxxxxxxxHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKQLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRVK

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1052	2.2.26 [Sep-21-2011]
Q5ZLT0		1087	Exportin-7 OS=Gallus gall	yes	no	0.979	0.947	0.444	0.0
Q9EPK7		1087	Exportin-7 OS=Mus musculu	yes	no	0.985	0.954	0.442	0.0
Q9UIA9		1087	Exportin-7 OS=Homo sapien	yes	no	0.982	0.951	0.442	0.0
Q5R9G4		1087	Exportin-7 OS=Pongo abeli	yes	no	0.982	0.951	0.441	0.0
Q704U0		1087	Exportin-7-A OS=Xenopus l	N/A	no	0.981	0.950	0.439	0.0
Q569Z2		1087	Exportin-7-B OS=Xenopus l	N/A	no	0.981	0.950	0.438	0.0
Q9H2T7		1088	Ran-binding protein 17 OS	no	no	0.981	0.949	0.416	0.0
Q99NF8		1088	Ran-binding protein 17 OS	no	no	0.984	0.952	0.418	0.0
Q9GQN0		1098	Ran-binding protein 16 OS	yes	no	0.975	0.934	0.394	0.0
Q54DN3		1007	Exportin-7 OS=Dictyosteli	yes	no	0.898	0.938	0.347	1e-162

>sp\|Q5ZLT0\|XPO7_CHICK Exportin-7 OS=Gallus gallus GN=XPO7 PE=2 SV=1	Back alignment and function desciption

 Score =  901 bits (2328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/1082 (44%), Positives = 695/1082 (64%), Gaps = 52/1082 (4%)

Query: 1    MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLAS 60
            ++SLAQLE LC++LY + D+  R  AE  L  F+ + D +S+CQ +L+   + Y+ +LA+
Sbjct: 5    VQSLAQLENLCKQLYETTDTATRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAA 64

Query: 61   SSLLKQV--TEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDD 118
            + L K V  T + L L+ R+DIRNY++NYLA R P+L +FVT +LIQL  R+TK GWFD 
Sbjct: 65   TCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATR-PKLATFVTQALIQLYARITKLGWFDC 123

Query: 119  DR----FRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFR 174
             +    FR+++ + T FL Q + +H  IG+ IL+QL +E+NQ +   P T HR++A SFR
Sbjct: 124  QKDEYVFRNVITDVTRFL-QDSVEHCIIGVTILSQLTNEINQADTTHPLTKHRKIASSFR 182

Query: 175  DQSLFQIFQISLTSLGQ-------LKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEE 227
            D SLF IF +S   L Q       L  +    L    L L   CL+FDF+GTS DESS++
Sbjct: 183  DSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLTHNCLNFDFIGTSTDESSDD 242

Query: 228  FGTVQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARS 287
              TVQIP++WR    D STLQ+FFD Y       S   L CLV++ASVRRSLF N+A R+
Sbjct: 243  LCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLVLSCLVQIASVRRSLF-NNAERA 301

Query: 288  KFLAHLMTGTKEILQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAE 347
            KFL+HL+ G K IL+  Q L+D +NYHE+CRLL R + NYQL ELV VE Y + I+L+A 
Sbjct: 302  KFLSHLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVENYPEVIRLIAN 361

Query: 348  FTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSV 407
            FT+ SLQ W++A +SV+YLL LW RL  SVPY+K   P +L+ + P++T+ +ITSR  SV
Sbjct: 362  FTVTSLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTKAYITSRLESV 421

Query: 408  QAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQT 467
                 D L D PLD+  L+Q QLD    + R +YE +   ++   +   QSY E  +  T
Sbjct: 422  HIILRDGLED-PLDDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQSYQELLQSAT 480

Query: 468  GDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLH 527
                +++V E +L W+V+II A++   + +  S + Q+ +D EL  RVLQL+N+TDS   
Sbjct: 481  ASPMDVAVQEGRLTWLVYIIGAVIG-GRVSFASTDEQDAMDGELVCRVLQLMNLTDS--- 536

Query: 528  SQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKQLYARLSELLGLHDHLLLLNVIV 587
              R  +   ++L+ A+L+FF+ FRK Y+GDQ   SSK LY RLSE+LGL+D  ++L+V +
Sbjct: 537  --RLAQAGNEKLELAMLSFFEQFRKIYIGDQVQKSSK-LYRRLSEVLGLNDETMVLSVFI 593

Query: 588  GKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPF--- 644
            GKI TNLK +   + +   TL L  +L+ GY + + L+KL  ++F++ NHT EHF F   
Sbjct: 594  GKIITNLKYWGRCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHFSFLGI 653

Query: 645  -----LEEYRCSRSRTTFYYTIGWLIFME--ESPVKFKSSMDPLLQVFISLESTPDSMFR 697
                 L + RC   RTTFY  +G L+ ++  E   +++  M PL   F     T   MF 
Sbjct: 654  NNQSNLTDMRC---RTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAF----ETVAQMFS 706

Query: 698  TDA-----VKCALIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPE 752
            T+       K  L+GL+RDLRGIA A N++ ++ +LF+W+YP++MP+L + I  W   P 
Sbjct: 707  TNTFNEQEAKRTLVGLVRDLRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPA 766

Query: 753  VTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAA--DIYA 810
             TTP+LK MAE V N++QRL FD SSPNGILLFRE SK+I  YG+R+L+L       +YA
Sbjct: 767  CTTPVLKLMAELVHNRSQRLQFDVSSPNGILLFRETSKMITTYGNRILTLGEVPKDQVYA 826

Query: 811  YKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKL 870
             K KG+ ICF++L  AL+G+YVNFGVF LYGD AL +AL   +K+ LSIP +D+L + KL
Sbjct: 827  LKLKGISICFSMLKAALSGSYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKL 886

Query: 871  TKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFY 930
            +++Y++ LEVL   H+ FI +L  +  M+I+ S+  GL  LDT + + C + +D++  + 
Sbjct: 887  SQSYYSLLEVLTQDHMNFIASLEPHVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYL 946

Query: 931  FNNITMG-EAPTSPAAINLAR--HIV-ECPTLFPEILKTLFEIVLFEDCGNQWSLSRPML 986
            F  ++   +  T+P      R  HI+ + P +  ++L T+  I++FEDC NQWS+SRP+L
Sbjct: 947  FKQLSRSTKKRTTPLTQESDRFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLL 1006

Query: 987  SLILISEQVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFR 1046
             LIL++E+ FSDL+  I+ SQP ++ Q + +CF+ LM  + R+L +KNRD+FTQNL+ FR
Sbjct: 1007 GLILLNEKYFSDLRNSIVNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFR 1066

Query: 1047 HE 1048
             E
Sbjct: 1067 RE 1068

Mediates the nuclear export of proteins (cargos) with broad substrate specificity.
Gallus gallus (taxid: 9031)

>sp\|Q9EPK7\|XPO7_MOUSE Exportin-7 OS=Mus musculus GN=Xpo7 PE=2 SV=3	Back alignment and function description

>sp\|Q9UIA9\|XPO7_HUMAN Exportin-7 OS=Homo sapiens GN=XPO7 PE=1 SV=3	Back alignment and function description

>sp\|Q5R9G4\|XPO7_PONAB Exportin-7 OS=Pongo abelii GN=XPO7 PE=2 SV=3	Back alignment and function description

>sp\|Q704U0\|XPO7A_XENLA Exportin-7-A OS=Xenopus laevis GN=xpo7-a PE=1 SV=1	Back alignment and function description

>sp\|Q569Z2\|XPO7B_XENLA Exportin-7-B OS=Xenopus laevis GN=xpo7-b PE=2 SV=1	Back alignment and function description

>sp\|Q9H2T7\|RBP17_HUMAN Ran-binding protein 17 OS=Homo sapiens GN=RANBP17 PE=2 SV=1	Back alignment and function description

>sp\|Q99NF8\|RBP17_MOUSE Ran-binding protein 17 OS=Mus musculus GN=Ranbp17 PE=2 SV=1	Back alignment and function description

>sp\|Q9GQN0\|RBP16_DROME Ran-binding protein 16 OS=Drosophila melanogaster GN=Ranbp16 PE=2 SV=1	Back alignment and function description

>sp\|Q54DN3\|XPO7_DICDI Exportin-7 OS=Dictyostelium discoideum GN=xpo7 PE=3 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1052
255569209		1089	Exportin-7, putative [Ricinus communis]	1.0	0.966	0.920	0.0
359494939		1052	PREDICTED: exportin-7-like [Vitis vinife	1.0	1.0	0.926	0.0
449458075		1061	PREDICTED: LOW QUALITY PROTEIN: exportin	0.999	0.990	0.907	0.0
224057198		1049	predicted protein [Populus trichocarpa]	0.997	1.0	0.911	0.0
224073084		1049	predicted protein [Populus trichocarpa]	0.997	1.0	0.903	0.0
356507720		1051	PREDICTED: exportin-7-A-like [Glycine ma	0.997	0.998	0.886	0.0
356517848		1053	PREDICTED: exportin-7-A-like [Glycine ma	0.997	0.996	0.884	0.0
334187452		1052	armadillo/beta-catenin-like repeat-conta	1.0	1.0	0.844	0.0
8978348		1059	human RAN binding protein 16-like [Arabi	1.0	0.993	0.838	0.0
334187450		1059	armadillo/beta-catenin-like repeat-conta	0.999	0.992	0.843	0.0

>gi\|255569209\|ref\|XP_002525573.1\| Exportin-7, putative [Ricinus communis] gi\|223535152\|gb\|EEF36832.1\| Exportin-7, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 2018 bits (5227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 968/1052 (92%), Positives = 1014/1052 (96%)

Query: 1    MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLAS 60
            MESLAQLEALCERLYNSQDS ERAHAENTLKCFS+NTDYISQCQ+ILDNALTPYALMLAS
Sbjct: 1    MESLAQLEALCERLYNSQDSAERAHAENTLKCFSMNTDYISQCQYILDNALTPYALMLAS 60

Query: 61   SSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDR 120
            SSLLKQVTEHSL+ QLRLDI+NYLINYLA RGPELQ FV ASLIQLLCR+TKFGWFDDDR
Sbjct: 61   SSLLKQVTEHSLSTQLRLDIQNYLINYLATRGPELQPFVIASLIQLLCRVTKFGWFDDDR 120

Query: 121  FRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQ 180
            FRD+VKESTNFL QATS+HYAIGLKILNQLVSEMNQPN GLP+T+HRRVACSFRDQSLFQ
Sbjct: 121  FRDVVKESTNFLGQATSNHYAIGLKILNQLVSEMNQPNTGLPATNHRRVACSFRDQSLFQ 180

Query: 181  IFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPV 240
            IFQISLTSL QLK+DV+SRLQELALSL LKCLSFDFVGTSIDESSEEFGTVQIPS+WRPV
Sbjct: 181  IFQISLTSLHQLKNDVSSRLQELALSLSLKCLSFDFVGTSIDESSEEFGTVQIPSSWRPV 240

Query: 241  LEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEI 300
            LEDPSTLQIFFDYYAIT APLSKEALECLVRLASVRRSLFTND  RSKFLAHLMTGTKEI
Sbjct: 241  LEDPSTLQIFFDYYAITTAPLSKEALECLVRLASVRRSLFTNDTTRSKFLAHLMTGTKEI 300

Query: 301  LQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWAS 360
            LQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGY DWIQLVAEFTL SLQSWQWAS
Sbjct: 301  LQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYGDWIQLVAEFTLTSLQSWQWAS 360

Query: 361  SSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPL 420
            SSVYYLLGLWS+LVTSVPYLKGDAPS+LDEFVPKITEGFITSRFNSVQAGFPDDLSDNPL
Sbjct: 361  SSVYYLLGLWSKLVTSVPYLKGDAPSMLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPL 420

Query: 421  DNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKL 480
            DNVELLQDQLDCFPYLCRFQYE+SG YIIN MEPILQ+YTERAR+QT D +E++VIEAKL
Sbjct: 421  DNVELLQDQLDCFPYLCRFQYESSGFYIINIMEPILQAYTERARVQTTDGNELAVIEAKL 480

Query: 481  AWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLD 540
            AWIVHIIAAI+KIKQ TGCS ESQE+LDAELSARVLQLINV DSGLHSQRY +LSKQRLD
Sbjct: 481  AWIVHIIAAILKIKQSTGCSAESQEMLDAELSARVLQLINVMDSGLHSQRYGQLSKQRLD 540

Query: 541  RAILTFFQHFRKSYVGDQAMHSSKQLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTES 600
            RAILTFFQHFRKSYVGDQA+HSSKQLYARLSELLGLHDHL+LLNVIVGKIATNLKCYTES
Sbjct: 541  RAILTFFQHFRKSYVGDQAVHSSKQLYARLSELLGLHDHLVLLNVIVGKIATNLKCYTES 600

Query: 601  QEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYT 660
            +EVIDHTL+LFLELASGYMTGKLLLKLD IKFIVANHTREHFPFLEEYRCSRSRT FYYT
Sbjct: 601  EEVIDHTLNLFLELASGYMTGKLLLKLDAIKFIVANHTREHFPFLEEYRCSRSRTIFYYT 660

Query: 661  IGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATN 720
            IGWLIFME+SPVKFKSSM+PLLQVFISLESTPD+MFR+DAVK ALIGLMRDLRGIAMATN
Sbjct: 661  IGWLIFMEDSPVKFKSSMEPLLQVFISLESTPDAMFRSDAVKFALIGLMRDLRGIAMATN 720

Query: 721  SRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPN 780
               TYGLLFDWLYPAH+PLLLKGISHW DTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPN
Sbjct: 721  RHVTYGLLFDWLYPAHLPLLLKGISHWADTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPN 780

Query: 781  GILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELY 840
            GILLFREVSKLIVAYG+R+L+LPNAADIYAYKYKG+WIC TIL+RALAGNYVNFGVFELY
Sbjct: 781  GILLFREVSKLIVAYGTRILTLPNAADIYAYKYKGIWICLTILSRALAGNYVNFGVFELY 840

Query: 841  GDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHI 900
            GDRAL+DALDIALK+TLSIPLADILAFRKLT+AYFAFLEVLFSSHI FILNL TNTFMHI
Sbjct: 841  GDRALADALDIALKLTLSIPLADILAFRKLTRAYFAFLEVLFSSHIIFILNLETNTFMHI 900

Query: 901  VGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFP 960
            VGSLESGLKGLDTNISSQCA+AVDNLAAFYFNNITMGEAPT PAA+ LARHI +CP LFP
Sbjct: 901  VGSLESGLKGLDTNISSQCASAVDNLAAFYFNNITMGEAPTLPAAVKLARHIADCPNLFP 960

Query: 961  EILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSVCFD 1020
            EILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQ+FSDLKAQIL SQPVDQHQRLS+CFD
Sbjct: 961  EILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQIFSDLKAQILVSQPVDQHQRLSLCFD 1020

Query: 1021 KLMADVARSLDSKNRDKFTQNLTVFRHEFRVK 1052
            KLMADV RSLDSKNRD+FTQNLTVFRHEFRVK
Sbjct: 1021 KLMADVTRSLDSKNRDRFTQNLTVFRHEFRVK 1052

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359494939\|ref\|XP_003634876.1\| PREDICTED: exportin-7-like [Vitis vinifera] gi\|298205126\|emb\|CBI40647.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449458075\|ref\|XP_004146773.1\| PREDICTED: LOW QUALITY PROTEIN: exportin-7-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224057198\|ref\|XP_002299168.1\| predicted protein [Populus trichocarpa] gi\|222846426\|gb\|EEE83973.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224073084\|ref\|XP_002303964.1\| predicted protein [Populus trichocarpa] gi\|222841396\|gb\|EEE78943.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356507720\|ref\|XP_003522612.1\| PREDICTED: exportin-7-A-like [Glycine max]	Back alignment and taxonomy information

>gi\|356517848\|ref\|XP_003527598.1\| PREDICTED: exportin-7-A-like [Glycine max]	Back alignment and taxonomy information

>gi|334187452|ref|NP_001190236.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi|334187454|ref|NP_001190237.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi|332003588|gb|AED90971.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi|332003589|gb|AED90972.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|8978348\|dbj\|BAA98201.1\| human RAN binding protein 16-like [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|334187450\|ref\|NP_001190235.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi\|332003587\|gb\|AED90970.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1052
TAIR\|locus:2152840		1066	AT5G06120 "AT5G06120" [Arabido	0.999	0.985	0.815	0.0
UNIPROTKB\|E9PEN8		1096	XPO7 "Exportin-7" [Homo sapien	0.875	0.840	0.425	2.4e-236
UNIPROTKB\|Q5ZLT0		1087	XPO7 "Exportin-7" [Gallus gall	0.984	0.953	0.434	2.9e-229
ZFIN\|ZDB-GENE-060628-2		1090	xpo7 "exportin 7" [Danio rerio	0.984	0.950	0.435	1.3e-228
UNIPROTKB\|A1A4I8		1087	XPO7 "Uncharacterized protein"	0.984	0.953	0.434	5.5e-228
MGI\|MGI:1929705		1087	Xpo7 "exportin 7" [Mus musculu	0.984	0.953	0.433	7e-228
UNIPROTKB\|Q9UIA9		1087	XPO7 "Exportin-7" [Homo sapien	0.984	0.953	0.434	8.9e-228
UNIPROTKB\|E2RH14		1087	XPO7 "Uncharacterized protein"	0.983	0.952	0.434	1.1e-227
UNIPROTKB\|E7ESC6		1088	XPO7 "Exportin-7" [Homo sapien	0.983	0.951	0.434	1.5e-227
UNIPROTKB\|F1LQM9		1089	F1LQM9 "Uncharacterized protei	0.984	0.951	0.431	3.9e-227

TAIR\|locus:2152840 AT5G06120 "AT5G06120" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 4531 (1600.1 bits), Expect = 0., P = 0.
 Identities = 864/1059 (81%), Positives = 959/1059 (90%)

Query:     1 MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLAS 60
             MESLAQLEA+CERLYNSQDS ERAHAEN+L+CFSVNTDYISQCQ+ILDN+  PY+LMLAS
Sbjct:     9 MESLAQLEAMCERLYNSQDSAERAHAENSLRCFSVNTDYISQCQYILDNSSKPYSLMLAS 68

Query:    61 SSLLKQVTEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDDR 120
             SSLLKQVT+H+L L LRLDIR Y++NYLA RGP++QSFV ASLIQLLCRLTKFGW DDDR
Sbjct:    69 SSLLKQVTDHTLPLNLRLDIRAYIVNYLATRGPKMQSFVIASLIQLLCRLTKFGWLDDDR 128

Query:   121 FRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRDQSLFQ 180
             FRD+VKESTNFL Q +SDHYAIGL+IL+QLV EMNQPNPGLPSTHHRRVAC+FRDQSLFQ
Sbjct:   129 FRDVVKESTNFLEQGSSDHYAIGLRILDQLVQEMNQPNPGLPSTHHRRVACNFRDQSLFQ 188

Query:   181 IFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPSAWRPV 240
             +F+I+LTSL  LK+D A RLQELALSL L+C+SFDFVGTSIDES+EEFGTVQIP++WR V
Sbjct:   189 VFRIALTSLSYLKNDAAGRLQELALSLALRCVSFDFVGTSIDESTEEFGTVQIPTSWRSV 248

Query:   241 LEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEI 300
             LED STLQIFFDYY  TE+PLSKEALECLVRLASVRRSLFTNDA RS FLAHLMTGTKEI
Sbjct:   249 LEDSSTLQIFFDYYGSTESPLSKEALECLVRLASVRRSLFTNDATRSNFLAHLMTGTKEI 308

Query:   301 LQTGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWAS 360
             LQTG+GLADHDNYH +CRLLGRFR+NYQLSELV +EGY +WIQLVAEFTLKSLQSWQWAS
Sbjct:   309 LQTGKGLADHDNYHVFCRLLGRFRLNYQLSELVKMEGYGEWIQLVAEFTLKSLQSWQWAS 368

Query:   361 SSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNSVQAGFPDDLSDNPL 420
             SSVYYLLG+WSRLV SVPYLKGD+PSLLDEFVPKITEGFI SRFNSVQA  PDD +D+PL
Sbjct:   369 SSVYYLLGMWSRLVASVPYLKGDSPSLLDEFVPKITEGFIISRFNSVQASVPDDPTDHPL 428

Query:   421 DNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDKSEISVIEAKL 480
             D VE+LQD+LDCFPYLCRFQYE +G+YIINTMEP+LQSYTER ++Q  D SE+++IEAKL
Sbjct:   429 DKVEVLQDELDCFPYLCRFQYERTGMYIINTMEPLLQSYTERGQLQFADNSELALIEAKL 488

Query:   481 AWXXXXXXXXXXXXQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLD 540
             +W            QC+GCS+E+QEVLDAELSARVL+L+NV DSGLH QRY E+SKQRLD
Sbjct:   489 SWIVHIVAAIVKIKQCSGCSVETQEVLDAELSARVLRLVNVMDSGLHRQRYGEISKQRLD 548

Query:   541 RAILTFFQHFRKSYVGDQAMHSSKQLYARXXXXXXXXXXXXXXNVIVGKIATNLKCYTES 600
             RAILTFFQ+FRKSYVGDQAMHSSK LYAR              NVIVGKIATNLKCYTES
Sbjct:   549 RAILTFFQNFRKSYVGDQAMHSSK-LYARLKELLGLHDHLVLLNVIVGKIATNLKCYTES 607

Query:   601 QEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFLEEYRCSRSRTTFYYT 660
             +EVI+HTLSLFLELASGYMTGKLLLKLDT+ FI++NHTRE FPFLEEYRCSRSRTTFYYT
Sbjct:   608 EEVINHTLSLFLELASGYMTGKLLLKLDTVTFIISNHTREQFPFLEEYRCSRSRTTFYYT 667

Query:   661 IGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCALIGLMRDLRGIAMATN 720
             IGWLIFME+S +KFK+SM+PLLQVF +LESTPDSMFRTDAVK ALIGLMRDLRGIAMAT+
Sbjct:   668 IGWLIFMEDSLIKFKTSMEPLLQVFRTLESTPDSMFRTDAVKFALIGLMRDLRGIAMATS 727

Query:   721 SRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPN 780
             SRR+YG LFDWLYPAHMPLLL+G+SHW DTPEVTTPLLKFMAEFV NK QRLTFDSSSPN
Sbjct:   728 SRRSYGFLFDWLYPAHMPLLLRGVSHWFDTPEVTTPLLKFMAEFVHNKTQRLTFDSSSPN 787

Query:   781 GILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGNYVNFGVFELY 840
             GILLFREVSKLIVAYGSR+L+LPN ADIYA+KYKG+W+  TIL+RAL+GNY NFGVFELY
Sbjct:   788 GILLFREVSKLIVAYGSRILALPNVADIYAFKYKGIWVSLTILSRALSGNYCNFGVFELY 847

Query:   841 GDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHI 900
             GDRAL+DALDIALKMTL+IPLADILA+RKLTKAYF F+EVL +SHITFIL L+T TFMH+
Sbjct:   848 GDRALADALDIALKMTLAIPLADILAYRKLTKAYFGFVEVLCASHITFILKLDTATFMHL 907

Query:   901 VGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFP 960
             VGSLESGLKGLDT+ISSQCA AVDNLA++YFNNITMGEAPT+PAAI  A+HI +CP+LFP
Sbjct:   908 VGSLESGLKGLDTSISSQCAIAVDNLASYYFNNITMGEAPTTPAAIRFAQHIADCPSLFP 967

Query:   961 EILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQ-------PVDQHQ 1013
             EILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQ+FSDLKA+IL+SQ       P DQHQ
Sbjct:   968 EILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQIFSDLKAKILSSQSIILMVQPADQHQ 1027

Query:  1014 RLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRVK 1052
             RLS CFD LM D++R LDSKNRDKFTQNLT+FRHEFRVK
Sbjct:  1028 RLSACFDSLMTDISRGLDSKNRDKFTQNLTLFRHEFRVK 1066

GO:0000059 "protein import into nucleus, docking" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005643 "nuclear pore" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA;ISS

GO:0006486 "protein glycosylation" evidence=RCA

GO:0009630 "gravitropism" evidence=RCA

UNIPROTKB\|E9PEN8 XPO7 "Exportin-7" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5ZLT0 XPO7 "Exportin-7" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-060628-2 xpo7 "exportin 7" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|A1A4I8 XPO7 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

MGI\|MGI:1929705 Xpo7 "exportin 7" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9UIA9 XPO7 "Exportin-7" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|E2RH14 XPO7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|E7ESC6 XPO7 "Exportin-7" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1LQM9 F1LQM9 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9GQN0	RBP16_DROME	No assigned EC number	0.3942	0.9752	0.9344	yes	no
Q9EPK7	XPO7_MOUSE	No assigned EC number	0.4427	0.9857	0.9540	yes	no
Q5ZLT0	XPO7_CHICK	No assigned EC number	0.4445	0.9790	0.9475	yes	no
Q54DN3	XPO7_DICDI	No assigned EC number	0.3479	0.8982	0.9384	yes	no
Q9UIA9	XPO7_HUMAN	No assigned EC number	0.4424	0.9828	0.9512	yes	no
Q5R9G4	XPO7_PONAB	No assigned EC number	0.4415	0.9828	0.9512	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1052
smart00913		67	smart00913, IBN_N, Importin-beta N-terminal domain	2e-05
pfam03810		71	pfam03810, IBN_N, Importin-beta N-terminal domain	9e-05

>gnl\|CDD\|197981 smart00913, IBN_N, Importin-beta N-terminal domain	Back alignment and domain information

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 26 AENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTEH--SLALQLRLDIRNY 83
          AE  L+ F  +  +      IL N+   Y   LA+ +L  ++T    SL  + + +I+N 
Sbjct: 1  AEKQLEQFQKSPGFWLLLLEILANSEDQYVRQLAAITLKNKITRRWSSLPEEEKEEIKNS 60

Query: 84 LINYLAK 90
          L+  L  
Sbjct: 61 LLELLLS 67

Members of the importin-beta (karyopherin-beta) family can bind and transport cargo by themselves, or can form heterodimers with importin-alpha. As part of a heterodimer, importin-beta mediates interactions with the pore complex, while importin-alpha acts as an adaptor protein to bind the nuclear localisation signal (NLS) on the cargo through the classical NLS import of proteins. Importin-beta is a helicoidal molecule constructed from 19 HEAT repeats. Many nuclear pore proteins contain FG sequence repeats that can bind to HEAT repeats within importins.. which is important for importin-beta mediated transport. Length = 67

>gnl\|CDD\|217743 pfam03810, IBN_N, Importin-beta N-terminal domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1052
KOG1410		1082	consensus Nuclear transport receptor RanBP16 (impo	100.0
COG5101		1053	CRM1 Importin beta-related nuclear transport recep	100.0
KOG4541		748	consensus Nuclear transport receptor exportin 4 (i	100.0
KOG2020		1041	consensus Nuclear transport receptor CRM1/MSN5 (im	100.0
KOG2022		982	consensus Nuclear transport receptor LGL2 (importi	99.88
PF08767		319	CRM1_C: CRM1 C terminal; InterPro: IPR014877 CRM1	99.8
KOG2021		980	consensus Nuclear mRNA export factor receptor LOS1	99.79
KOG2171		1075	consensus Karyopherin (importin) beta 3 [Nuclear s	99.33
KOG2023		885	consensus Nuclear transport receptor Karyopherin-b	99.23
PF08389		148	Xpo1: Exportin 1-like protein; InterPro: IPR013598	99.04
KOG1991		1010	consensus Nuclear transport receptor RANBP7/RANBP8	98.93
KOG1992		960	consensus Nuclear export receptor CSE1/CAS (import	98.92
KOG2081		559	consensus Nuclear transport regulator [Intracellul	98.78
PF03810		77	IBN_N: Importin-beta N-terminal domain; InterPro:	98.18
KOG1241		859	consensus Karyopherin (importin) beta 1 [Nuclear s	97.97
COG5657		947	CSE1 CAS/CSE protein involved in chromosome segreg	96.49
KOG2274		1005	consensus Predicted importin 9 [Intracellular traf	96.23
KOG1993		978	consensus Nuclear transport receptor KAP120 (impor	95.19
COG5656		970	SXM1 Importin, protein involved in nuclear import	93.76
KOG4541		748	consensus Nuclear transport receptor exportin 4 (i	92.63
COG5215		858	KAP95 Karyopherin (importin) beta [Intracellular t	91.01
PF03378		435	CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: I	81.17

>KOG1410 consensus Nuclear transport receptor RanBP16 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

Probab=100.00  E-value=4.1e-206  Score=1657.98  Aligned_cols=1041  Identities=50%  Similarity=0.843  Sum_probs=996.1

Q ss_pred             ChhHHHHHHHHHHHhcCCCHHHHHHHHHHHhhhccCcccHHHHHHHHhcCCChhHHHHHHHHHHHHHhh-cCCCHHHHHH
Q 001563            1 MESLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLLKQVTE-HSLALQLRLD   79 (1052)
Q Consensus         1 ~~~l~~le~~~~~ly~~~~~~~r~~Ae~~L~~f~~~~~~~~~~~~IL~~S~~~~~~f~a~~~L~~~i~~-~~l~~~~r~~   79 (1052)
                      |+++++||.+|+.+|.++|+.+|.+||+.|.+|.++|+++.+|+.+|++++.||.++.|+++|.+.+.+ +.+|.++|.+
T Consensus         1 m~sLaqLe~lCk~LY~s~D~~~R~~AE~~L~e~s~speclskCqlll~~gs~pYs~mlAst~L~Klvs~~t~lpl~qrld   80 (1082)
T KOG1410|consen    1 MQSLAQLESLCKDLYESTDPTARHRAEKALAELSESPECLSKCQLLLERGSYPYSQMLASTCLMKLVSRKTPLPLEQRLD   80 (1082)
T ss_pred             CccHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHccCHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHcCCCCCcHHHHHH
Confidence            789999999999999999999999999999999999999999999999999999999999999999999 8899999999


Q ss_pred             HHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHhhccCCCh----hhhhHHHHHHHHHhccCchhHHHHHHHHHHHHHhcc
Q 001563           80 IRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGWFDDD----RFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMN  155 (1052)
Q Consensus        80 lr~~ll~~l~~~~~~~~~~v~~~l~~~la~i~K~~W~~~~----~~~~~i~~i~~~l~~~~~~~~~~gl~lL~~lv~Ef~  155 (1052)
                      ||+|++||+.+++|.+++||...+++++|+++|.||+|..    ++|+.+.++.+|++.++.+||++|+.||+.+++||+
T Consensus        81 ir~Yilnylat~~Pk~~~fvi~sLiQl~arlTK~gW~d~~k~~y~FRd~v~~~~kfl~~~~ve~~~igv~iLsqLvqemN  160 (1082)
T KOG1410|consen   81 IRNYILNYLATGAPKLAPFVIQSLIQLFARLTKLGWFDQQKDEYVFRDPVDDVTKFLQMDNVEHCIIGVQILSQLVQEMN  160 (1082)
T ss_pred             HHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHhccccccccccchhhhhHHHHHHHhccCchHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999854    789999999999987789999999999999999999


Q ss_pred             CCCCCcchHHhHhhhhhccccchHHHHHHHHHHHHhhh-----hhhHHHHHHHHHHHHhHhccccCccCCCCCCcccccc
Q 001563          156 QPNPGLPSTHHRRVACSFRDQSLFQIFQISLTSLGQLK-----SDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGT  230 (1052)
Q Consensus       156 ~~~~~~~~~~h~k~~~~f~~~~L~~if~~~~~~L~~~~-----~~~~~~l~~~~L~l~~~~Lsw~f~~~~~de~~~~~~~  230 (1052)
                      +.+.+.+..+|||...+|||+.|.+||.+++.+|+...     ++.+..+..++|++..+||+|||+|++.||++||..+
T Consensus       161 ~~~~~~p~tkHRkias~FRD~sL~~vf~laln~L~~~~~~nlnd~~q~~L~~~vL~L~l~Cl~FDfiGss~DEssed~ct  240 (1082)
T KOG1410|consen  161 QADGMDPSTKHRKIASSFRDDSLFDVFSLALNLLKDNVDLNLNDRAQLGLLMQVLKLNLNCLNFDFIGSSTDESSEDLCT  240 (1082)
T ss_pred             CCCCCCcchHHHHHHhhhhhhHHHHHHHHHHHHHHHhcccCcccHhHhhHHHHHHHHHhhhccccccccccccccccccc
Confidence            99999999999999999999999999999999999875     3335689999999999999999999999999999999


Q ss_pred             ccCCCCccccccCccHHHHHHHHHhhcCCcchHHHHHHHHHHhhhcccCCCChHHHHHHHHHHHHHHHHHhhcCcCCCCc
Q 001563          231 VQIPSAWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKEILQTGQGLADH  310 (1052)
Q Consensus       231 ~~~p~~W~~~l~~~~~l~~lf~~y~~~~~~l~~~~l~cL~~l~sl~~~~f~~~~~~~~~l~~~l~~~~~il~~~~~l~~~  310 (1052)
                      ||+|.+||..|.|++.+++||++|...+|+++..++.||+|+||+||++|++ .+|.+|++++++|+..|+++++|++|+
T Consensus       241 VQIPTsWRs~f~d~stlqlfFdly~slp~~~S~~alsclvqlASvRRsLFN~-aeRa~yl~~Lv~Gvk~il~np~~LsD~  319 (1082)
T KOG1410|consen  241 VQIPTSWRSSFLDSSTLQLFFDLYHSLPPELSELALSCLVQLASVRRSLFNG-AERAKYLQHLVEGVKRILENPQGLSDP  319 (1082)
T ss_pred             eecCcHHHHHhcCchHHHHHHHHhccCCchhhHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHhCCcCCCCc
Confidence            9999999999999999999999999899999999999999999999999965 899999999999999999999999999


Q ss_pred             hhHHHHHHHHhhhhhhcchhhhhcccChHHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHhhcccCccCCCCcchhhh
Q 001563          311 DNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVAEFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDE  390 (1052)
Q Consensus       311 e~~~~~~~~l~rl~~~~~l~~l~~~~~~~~~l~~l~~~T~~~l~~~~~~~~s~~~lL~~W~~lv~~~~~~~~~~~~~l~~  390 (1052)
                      .+||+|||++.|+++|||+.+|+++++|++||+.+|.||+.+++.|.|+++|.+|||.+|.+|+.++||++++.|+.++.
T Consensus       320 ~nyHeFCRllaRlktNYQL~ELv~v~~Y~e~irLiAeFTv~SLq~wefa~nSvyyLlt~WqRmvaSVPyvk~~~phlLd~  399 (1082)
T KOG1410|consen  320 ANYHEFCRLLARLKTNYQLGELVKVECYPEVIRLIAEFTVTSLQHWEFAPNSVYYLLTLWQRMVASVPYVKNTEPHLLDT  399 (1082)
T ss_pred             chHHHHHHHHHHHHhhhhhHhhhccCCcHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHhcCCcccCCChHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhccccccccccCCCCCCCCCCcHHHHHHHHhhhhhhhccchhhHHHHHHHhHHHHHHHHHHHhhcCCCCc
Q 001563          391 FVPKITEGFITSRFNSVQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQTGDK  470 (1052)
Q Consensus       391 ~~~~I~~~yi~~~l~~~~~~~~~e~~e~~~~d~~~~~~~le~i~~l~r~~~~~t~~~l~~ll~~~~~~~~~~~~~~~~~~  470 (1052)
                      |+|+|.++||.||++.++.+++|+ .|+|+||.+...+++|++++++||.|+.|+.+|.++|++..++|++....+..++
T Consensus       400 y~PeIt~afi~SRl~sV~~ivrd~-~d~PLdd~~~~~q~le~l~~icRceYEkTc~llvq~fdq~aqsyqe~~~~~s~~~  478 (1082)
T KOG1410|consen  400 YCPEITKAFITSRLQSVEIIVRDG-LDDPLDDTGAVQQQLEQLATICRCEYEKTCALLVQLFDQNAQSYQELLQNGSAND  478 (1082)
T ss_pred             hcHHHHHHHHHHHhhhhheecccC-CCCcchhhHHHHHHHHHhhhhhhhhHhhHHHHHHHHHhhhHHHHHHHhcccCCCc
Confidence            999999999999999998777766 6999999999999999999999999999999999999999999988765444466


Q ss_pred             chhhHHHHHHHHHHHHHHHHhhcccccCCCcccccchhhhHHHHHHHHhhhccccccccccccccHHHHHHHHHHHHHHh
Q 001563          471 SEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGLHSQRYCELSKQRLDRAILTFFQHF  550 (1052)
Q Consensus       471 ~~l~~~~e~L~Wli~i~g~~l~~~~~~~~~~~~~~~~d~~L~~~v~~l~~l~~~~~~~~~~~~~s~~rl~~a~l~Fl~~~  550 (1052)
                      .++.+.|++|.|+|+|+|++++|+ .+.+++++++++||+|+++|++++++.|...     +..+.+|++.|++|||++|
T Consensus       479 ~d~ai~EgrL~Wlv~lvgtvV~gk-~t~~Std~~d~mDgEL~arvlql~nlmdsr~-----~~~~n~rle~ail~f~eqF  552 (1082)
T KOG1410|consen  479 ADIAIQEGRLVWLVYLVGTVVGGK-TTATSTDEHDAMDGELSARVLQLVNLMDSRL-----PLKGNERLELAILHFLEQF  552 (1082)
T ss_pred             hhHHHHhhhhhhhHHHhHHHhcce-ecccccchhhhhhhHHHHHHHHHHHhhhccc-----chhhhHHHHHHHHHHHHHH
Confidence            677788999999999999999999 4456788999999999999999999988754     4566799999999999999


Q ss_pred             hhHhhccccccchHHHHHHHHHHhCCCChHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHhcccchhhHHhcchHH
Q 001563          551 RKSYVGDQAMHSSKQLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESQEVIDHTLSLFLELASGYMTGKLLLKLDTI  630 (1052)
Q Consensus       551 ~~~yl~~~~~~~~~~~~~~l~~~~G~~~~~~~~~~~l~ki~~~l~~~~~~~~vi~~al~Ll~~l~~~~~~~~~l~~~~~~  630 (1052)
                      +|+|+|++.++ ++|+|.+++|.+|+.|+..+++++++||.+||++|+..++|+..+++||.+|+.|++.+|+++++|.|
T Consensus       553 Rk~YvgDQ~~r-sSkvY~rl~e~Lgi~de~~~L~viv~KI~TNLK~w~~~e~vi~~tLslf~dLs~GY~~~kkL~kl~~V  631 (1082)
T KOG1410|consen  553 RKAYVGDQIQR-SSKVYARLSEVLGITDESDVLGVIVGKILTNLKYWGRNEPVISLTLSLFNDLSLGYSAVKKLVKLDAV  631 (1082)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHhhhHHHHHHHhcchhh
Confidence            99999999877 56799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcccCCCCCcccc---cccchhHHHHHHHHHHHhcc--CChHHHHHhhHHHHHHHHHhh-cCCCcccccHHHHHH
Q 001563          631 KFIVANHTREHFPFLEEY---RCSRSRTTFYYTIGWLIFME--ESPVKFKSSMDPLLQVFISLE-STPDSMFRTDAVKCA  704 (1052)
Q Consensus       631 ~~l~~~~~~~~~~~l~~~---~~~~~r~~~y~al~~~~~~~--~~~~~~~~~l~p~~~~~~~l~-~~~~~~~~~~~~~~~  704 (1052)
                      +.+++||++++|||++..   +..|+||+||.|+|++++.|  +++..|++||.|+++.|..+. .-+++.++.+++|+.
T Consensus       632 qfmlnNHT~ehF~FLg~~~~~~~~r~RTTFY~al~rLl~~d~sede~~fe~fm~PLt~~fe~v~~~~~nn~f~ee~vK~~  711 (1082)
T KOG1410|consen  632 QFMLNNHTSEHFPFLGINIDLQDMRCRTTFYTALTRLLMVDLSEDEDMFERFMLPLTDAFEGVLQVFQNNCFEEEQVKRI  711 (1082)
T ss_pred             hhHhcccchhhCcccccCccchhhhhHhHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHH
Confidence            999999999999999866   66899999999999999887  447799999999999999775 222256999999999


Q ss_pred             HHHHHHHHhhHHhhhccchhHHHHHHHHhhcchHHHHHHhhcccCCCchHHHHHHHHHHHhhccccceeccCCCcchhhh
Q 001563          705 LIGLMRDLRGIAMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILL  784 (1052)
Q Consensus       705 l~~ll~~l~Gi~~a~~~~~~~~~lf~~i~p~~~~~~~~l~~~y~~~~~v~~~iLkl~~~~~~n~~~ri~f~~~s~~~~~l  784 (1052)
                      ++|++||+||||.|.+++.+|.++|+|+||.++|++...++.|.++|++++|||||++|+|+||+||+.|+.+||+|++|
T Consensus       712 liGL~RDLRGiA~A~~tktsy~~LFdWmYP~~mpllq~~Ve~W~~~p~vtTPiLklmaE~v~NrsQRL~Fd~SSpngiLL  791 (1082)
T KOG1410|consen  712 LIGLCRDLRGIAFASNTKTSYQMLFDWMYPEYMPLLQRAVEKWYGCPDVTTPILKLMAELVQNRSQRLKFDVSSPNGILL  791 (1082)
T ss_pred             HHHHHHHhhhhhhhhccchHHHHHHHHhhhhHHHHHHHHHHhcCCCCccccHHHHHHHHHHhhhHhheecccCCCceeEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhccCC--CchhhHhhhhhhHHHHHHHHHHhhcCCCcccccccccCCCcHHHHHHHHHHhhcccChh
Q 001563          785 FREVSKLIVAYGSRVLSLP--NAADIYAYKYKGMWICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLA  862 (1052)
Q Consensus       785 f~~~~~l~~~y~~~~~~~~--~~~~~~~~~~k~l~~~l~~l~~~l~~~~vnfg~~~~y~D~~~~~~~~~~l~~~l~ip~~  862 (1052)
                      ||+++|++..||.+++++|  ++...|+++||+|.+|+.+|+++++|+|||||||++|||+++.+++..+++|+++||..
T Consensus       792 FrEtSKmv~~YG~riL~Lp~vskdqiY~~kyKgI~v~~siLk~AL~GnYv~FGVFrLYGD~~l~daL~~fvKm~lsIp~s  871 (1082)
T KOG1410|consen  792 FRETSKMVSIYGNRILQLPEVSKDQIYAEKYKGISVCFSILKNALSGNYVNFGVFRLYGDSALDDALQTFVKMLLSIPHS  871 (1082)
T ss_pred             ehhhhHHHHHHhhHhhcccCcchhhhHHHHhcCceehHHHHHHHhhcCccccceeeeeCchHHHHHHHHHHHHHhcCCHH
Confidence            9999999999999999998  45568999999999999999999999999999999999999999999999999999999


Q ss_pred             hHhhhHhhHHHHHHHHHHHHhhhHHhHhcCCHHHHHHHHHHHHHhhcCCChHHHhHHHHHHHHHHHHHHHhhccCCCC--
Q 001563          863 DILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMGEAP--  940 (1052)
Q Consensus       863 dl~~yPkl~~~~f~ll~~~~~~~~~~l~~l~~~~f~~l~~sl~~gl~~~~~~i~~~~~~~l~~l~~~~~~~~~~~~~~--  940 (1052)
                      |+++|||+.++||.|+|.+++.|+.++.+|+++.|..++.||..|+++.|+.|++.||.++|++++|+|+++.++..|  
T Consensus       872 D~l~Y~Klsqsyy~llE~l~qdhm~Fi~nL~~~vfm~ll~Si~sGLt~lDt~v~ssccsslD~i~tYlfk~itr~~~p~~  951 (1082)
T KOG1410|consen  872 DLLSYRKLSQSYYNLLEVLTQDHMPFITNLEPDVFMYLLRSISSGLTSLDTIVSSSCCSSLDTIVTYLFKRITRSTKPTR  951 (1082)
T ss_pred             HHHhHHHHHHHHhhHHHHHHhccchhhhcCcHHHHHHHHHHHHhccchhhHHHHhHHHHHHHHHHHHHHHHHhccCCCcC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999877666  


Q ss_pred             ---CChHHHHHHHHhhhCCCcHHHHHHHHHHHHhccCCCchhhchhhhHHHHhcCHHHHHHHHHHHHhcCChhhHHHHHH
Q 001563          941 ---TSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQWSLSRPMLSLILISEQVFSDLKAQILTSQPVDQHQRLSV 1017 (1052)
Q Consensus       941 ---~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~s~~L~~li~~~~~~f~~l~~~li~~q~~~~~~~l~~ 1017 (1052)
                         .+|.++.+..++++||+++++||+.++++++|+||++||++||||++||++++++|..++.+|+++||+++|+++..
T Consensus       952 ~~~~tpa~~r~l~~i~q~Pdil~qml~tl~~ii~Fedc~nQWSlSRPlLgLILi~E~~fSdlk~~l~ssQp~dkqq~l~~ 1031 (1082)
T KOG1410|consen  952 KVGMTPAGDRFLHAIQQHPDILQQMLSTLINIIMFEDCRNQWSLSRPLLGLILINEKYFSDLKASLTSSQPYDKQQDLDM 1031 (1082)
T ss_pred             cCCCChhHHHHHHHHHhChHHHHHHHHHHHHHHhHHhhcccccccchhhHHHhhhHHHHHHHHHHHhcCCCcchhHHHHH
Confidence               45899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhcccChhhHHHHHHHHHHHHHHhh
Q 001563         1018 CFDKLMADVARSLDSKNRDKFTQNLTVFRHEFR 1050 (1052)
Q Consensus      1018 af~~L~~~i~~~l~~~nr~~F~~nl~~F~~~vr 1050 (1052)
                      ||.+||+||+.+++.||||+||+|+..||++|+
T Consensus      1032 cF~~LM~~ve~nL~~KNrD~FTQNLt~FRrdv~ 1064 (1082)
T KOG1410|consen 1032 CFTNLMEGVERNLTVKNRDRFTQNLTRFRRDVA 1064 (1082)
T ss_pred             HHHHHHHHHhhcccccchhHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999997

>COG5101 CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion]	Back alignment and domain information

>KOG4541 consensus Nuclear transport receptor exportin 4 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2020 consensus Nuclear transport receptor CRM1/MSN5 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2022 consensus Nuclear transport receptor LGL2 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF08767 CRM1_C: CRM1 C terminal; InterPro: IPR014877 CRM1 (also known as Exportin1) mediates the nuclear export of proteins bearing a leucine-rich nuclear export signal (NES)	Back alignment and domain information

>KOG2021 consensus Nuclear mRNA export factor receptor LOS1/Exportin-t (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport; Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF08389 Xpo1: Exportin 1-like protein; InterPro: IPR013598 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane	Back alignment and domain information

>KOG1991 consensus Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1992 consensus Nuclear export receptor CSE1/CAS (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2081 consensus Nuclear transport regulator [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF03810 IBN_N: Importin-beta N-terminal domain; InterPro: IPR001494 Karyopherins are a group of proteins involved in transporting molecules through the pores of the nuclear envelope	Back alignment and domain information

>KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG5657 CSE1 CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]	Back alignment and domain information

>KOG2274 consensus Predicted importin 9 [Intracellular trafficking, secretion, and vesicular transport; Nuclear structure]	Back alignment and domain information

>KOG1993 consensus Nuclear transport receptor KAP120 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG5656 SXM1 Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG4541 consensus Nuclear transport receptor exportin 4 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion]	Back alignment and domain information

>PF03378 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: IPR005043 Mammalian cellular apoptosis susceptibility (CAS) proteins and the yeast chromosome-segregation protein, CSE1 are homologous []	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1052
3m1i_C		1049	Exportin-1; heat repeat, GTP-binding, nucleotide-b	4e-27
3a6p_A		1204	Exportin-5; exportin-5, RANGTP, nuclearexport, imp	7e-17
3gjx_A		1073	Exportin-1; transport, cytoplasm, nucleus, RNA-bin	4e-15
2x19_B		963	Importin-13; nuclear transport, protein transport;	4e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09
3ibv_A		980	Exportin-T; karyopherin, heat repeat, cytoplasm, n	7e-08

>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B Length = 1049	Back alignment and structure

 Score =  118 bits (296), Expect = 4e-27
 Identities = 130/1076 (12%), Positives = 316/1076 (29%), Gaps = 128/1076 (11%)

Query: 3    SLAQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSS 62
             +A L+ +    Y      ++  A+  L  F  N D   +   IL  +  P +  +A S 
Sbjct: 14   DIALLDQVVSTFYQGSGV-QQKQAQEILTKFQDNPDAWQKADQILQFSTNPQSKFIALSI 72

Query: 63   LLKQVTEH--SLALQLRLDIRNYLINYLAKRGPELQSFVTASLI-----QLLCRLTKFGW 115
            L K +T     L    R+ IRN+++  +     + + F T   +       L ++ K  W
Sbjct: 73   LDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEW 132

Query: 116  FDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRD 175
                 + + + E     S  + +     + +L  L  E+   +    +        +   
Sbjct: 133  --PQNWPEFIPELIGSSSS-SVNVCENNMIVLKLLSEEVFDFSAEQMTQAKALHLKNSMS 189

Query: 176  QSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPS 235
            +   QIF++       L+   +S L    L   L+ L +                     
Sbjct: 190  KEFEQIFKLCFQ---VLEQGSSSSLIVATLESLLRYLHWIPYR----------------- 229

Query: 236  AWRPVLEDPSTLQIFFDYYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMT 295
                 + + + L++    + +T        L+CL  +++++     ND  + + +     
Sbjct: 230  ----YIYETNILELLSTKF-MTSPDTRAITLKCLTEVSNLKIPQD-NDLIKRQTVLFFQN 283

Query: 296  GTKEILQ---------TGQGLADHDNYHEYCRLLGRFRVNYQLSELVNVEGYSDWIQLVA 346
              ++I                  + N   + + L  F   Y       +E      +L+ 
Sbjct: 284  TLQQIATSVMPVTADLKATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLL 343

Query: 347  EFTLKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDAPSLLDEFVPKITEGFITSRFNS 406
                  +Q  +     ++     +   + +  + +     + +E   ++    I +    
Sbjct: 344  NAHQYLIQLSKIEERELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENMV-- 401

Query: 407  VQAGFPDDLSDNPLDNVELLQDQLDCFPYLCRFQYENSGLYIINTMEPILQSYTERARMQ 466
                 P+++     D  E++++ +     +  ++ E   L  +  +  I       +++ 
Sbjct: 402  ----RPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLA 457

Query: 467  TGDKSEISVIEAKLAWIVHIIAAIVKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGL 526
                                I +I         S ++++     +   +L L        
Sbjct: 458  RQIDGSEWSWHNINTLS-WAIGSISG-----TMSEDTEKRFVVTVIKDLLDLT------- 504

Query: 527  HSQRYCELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKQLYARLSELLGLHDHLLLLNVI 586
              ++  + +K  +   I+     + +                       L  H   L  +
Sbjct: 505  -VKKRGKDNKAVVASDIMYVVGQYPRF----------------------LKAHWNFLRTV 541

Query: 587  VGKIATNLKCYTES-QEVIDHTLSLFLELASGYMTGKLLLKLDTIKFIVANHTREHFPFL 645
            + K+   +    E  Q++   T    ++    +   +   + +     +    ++    L
Sbjct: 542  ILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTTADL 601

Query: 646  EEYRCSRSRTTFYYTIGWLIFMEESPVKFKSSMDPLLQVFISLESTPDSMFRTDAVKCAL 705
            +     +   TFY   G +I  E S  +    +  L+Q+      T       +      
Sbjct: 602  Q----PQQVHTFYKACGIIISEERSVAERNRLLSDLMQLPNMAWDTIVEQSTANPTLLLD 657

Query: 706  IGLMRDLRGI-----AMATNSRRTYGLLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKF 760
               ++ +  I     A+ T+    +      +Y   + L     S  +        +   
Sbjct: 658  SETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNMLQLYRAVSSMISAQVAAEGLIATK 717

Query: 761  MAEFVLN---KAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMW 817
              +       K + L    +  +      +V K++V      +      ++   +   + 
Sbjct: 718  TPKVRGLRTIKKEILKLVETYISKARNLDDVVKVLVEPLLNAVLEDYMNNVPDARDAEVL 777

Query: 818  ICFTILARALAGNYVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAF 877
             C T +   +                 +   L    + TL +   D   + +    ++  
Sbjct: 778  NCMTTVVEKVGHMIPQG----------VILILQSVFECTLDMINKDFTEYPEHRVEFYKL 827

Query: 878  LEVLFSSHITFILNLNTNTFMHIVGSLESGLKGLDTNISSQCAAAVDNLAAFYFNNITMG 937
            L+V+        L L    F   V ++    K  + ++         +L         + 
Sbjct: 828  LKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVP 887

Query: 938  EAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFED----CGNQWSLSRPMLSLILISE 993
             A                   F   +   F ++   D       Q  L   ++SL+    
Sbjct: 888  FA------------NEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLISLV-YDN 934

Query: 994  QVFSDLKAQILTSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEF 1049
            ++   L  +    Q       LS     ++++    L S+    F   LT    + 
Sbjct: 935  KISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQYKDL 990

PyMOL of 3m1i

>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens} Length = 1204	Back alignment and structure

>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A Length = 1073	Back alignment and structure

>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B Length = 963	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T* Length = 980	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		1052
d1wa5c_		959	a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Sacc	1e-06
d1qbkb_		888	a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapi	8e-05
d2bpta1		861	a.118.1.1 (A:1-861) Importin beta {Baker's yeast (	0.004

>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 959	Back information, alignment and structure


class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Exportin Cse1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.9 bits (118), Expect = 1e-06
 Identities = 36/324 (11%), Positives = 86/324 (26%), Gaps = 24/324 (7%)

Query: 5   AQLEALCERLYNSQDSVERAHAENTLKCFSVNTDYISQCQFILDNALTPYALMLASSSLL 64
           + LE + + L  S  +     +E  L+       +      ++ +   P +  LA +   
Sbjct: 2   SDLETVAKFLAESVIASTAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALFF 61

Query: 65  KQV---------TEHSLALQLRLDIRNYLINYLAKRGPELQSFVTASLIQLLCRLTKFGW 115
           K             H L       I+  ++  +      LQ      + + +  +    +
Sbjct: 62  KNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQV----QIGEAISSIADSDF 117

Query: 116 FDDDRFRDLVKESTNFLSQATSDHYAIGLKILNQLVSEMNQPNPGLPSTHHRRVACSFRD 175
              DR+  L+ +  + LS          L + + +                 ++      
Sbjct: 118 P--DRWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFT 175

Query: 176 QSLFQIFQISLTSLGQLKSDVASRLQELALSLCLKCLSFDFVGTSIDESSEEFGTVQIPS 235
                + +     +   +++ AS L  L   L +    +            E        
Sbjct: 176 APFLNLLKTVDEQITANENNKAS-LNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMG 234

Query: 236 AWRPVLEDPSTLQIFFD--YYAITEAPLSKEALECLVRLASVRRSLFTNDAARSKFLAHL 293
            +   L   + L    D   +A     +     E +    +    +F         +   
Sbjct: 235 IFHKYLSYSNPLLEDPDETEHASVLIKVKSSIQELVQLYTTRYEDVFGP------MINEF 288

Query: 294 MTGTKEILQTGQGLADHDNYHEYC 317
           +  T  +L +      +D      
Sbjct: 289 IQITWNLLTSISNQPKYDILVSKS 312

PyMOL of d1wa5c_

>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Length = 888	Back information, alignment and structure

>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 861	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1052
d1w9ca_		321	Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [Tax	99.91
d1wa5c_		959	Exportin Cse1p {Baker's yeast (Saccharomyces cerev	99.89
d1qbkb_		888	Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96	99.68
d2bpta1		861	Importin beta {Baker's yeast (Saccharomyces cerevi	99.56
d1qgra_		876	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	99.22
d1ibrb_		458	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	98.53

>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Exportin HEAT-like repeat
domain: Exportin-1 (Xpo1, Crm1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.5e-22  Score=155.54  Aligned_cols=251  Identities=17%  Similarity=0.252  Sum_probs=169.8

Q ss_pred             HHHHHHHHHHHHHCCCCCEECCCCCCCHH---HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             78999999999641235111247891135---569999999999997650699811167654656999999999826099
Q 001563          754 TTPLLKFMAEFVLNKAQRLTFDSSSPNGI---LLFREVSKLIVAYGSRVLSLPNAADIYAYKYKGMWICFTILARALAGN  830 (1052)
Q Consensus       754 ~~~iLkl~~~~~~n~~~ri~f~~~s~~~~---~lf~~~~~ii~~y~~~~~~~~~~~~~~~~~~k~i~~~l~il~~~l~~~  830 (1052)
                      -..+||++..+++.- .       .++.+   ++-..+..++..|.+.   .|..+  +++.+    .++..+.+.+++.
T Consensus        46 KkeiLkLi~t~i~~~-~-------d~~~v~~~~i~pl~~~vL~DY~~~---~p~~R--~~eVL----~l~~~ii~kl~~~  108 (321)
T d1w9ca_          46 KRETLKLISGWVSRS-N-------DPQMVAENFVPPLLDAVLIDYQRN---VPAAR--EPEVL----STMAIIVNKLGGH  108 (321)
T ss_dssp             HHHHHHHHHHHHTTC-S-------CHHHHHHHTHHHHHHHHHHHHHTS---CGGGC--CTHHH----HHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHHHCC-C-------CHHHHHHHHHHHHHHHHHHHHHHC---CHHHC--CHHHH----HHHHHHHHHHHHH
T ss_conf             999999999998438-9-------799999987888999999998847---61102--67599----9999999988786


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
Q ss_conf             73345655469970899999999964056824686128648999999999995537767448978999999999972048
Q 001563          831 YVNFGVFELYGDRALSDALDIALKMTLSIPLADILAFRKLTKAYFAFLEVLFSSHITFILNLNTNTFMHIVGSLESGLKG  910 (1052)
Q Consensus       831 ~vnfg~~~~y~D~~~~~~~~~~l~l~l~ip~~dl~~yPkl~~~~f~ll~~~~~~~~~~l~~l~~~~f~~l~~~l~~gl~~  910 (1052)
                      +          .+.++.+++.++++++.|..+|+.+||++|..||+|++.+++.|++.++++|++.|+.+++++.||++|
T Consensus       109 ~----------~~~v~~I~~~VFe~Tl~MI~~df~~yPehR~~ff~LL~~i~~~cf~~ll~lp~~qf~~vidsi~wa~kH  178 (321)
T d1w9ca_         109 I----------TAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKH  178 (321)
T ss_dssp             G----------GGGHHHHHHHHHHHHHHHHSSTTTCSHHHHHHHHHHHHHHHHHCTTHHHHSCHHHHHHHHHHHHHHTTC
T ss_pred             H----------HHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf             3----------557999999999999999863220080989999999999999788999849999999999999998189


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHH----HCHHHHH
Q ss_conf             884778699999999999998741368999974788999886209991899999999999416777502----1033548
Q 001563          911 LDTNISSQCAAAVDNLAAFYFNNITMGEAPTSPAAINLARHIVECPTLFPEILKTLFEIVLFEDCGNQW----SLSRPML  986 (1052)
Q Consensus       911 ~~~~i~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ll~~~~~~~~----~~s~~L~  986 (1052)
                      .+++|+..|++++..+...+.+..        +.++.+.      .+++..++..+|.++++.+|+..+    .+-+.|+
T Consensus       179 ~~~~V~~~gL~~l~~ll~n~~~~~--------~~~~~F~------~~y~~~il~~if~vltD~~Hk~gf~~q~~iL~~Lf  244 (321)
T d1w9ca_         179 TMRNVADTGLQILFTLLQNVAQEE--------AAAQSFY------QTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMF  244 (321)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHCH--------HHHHHHH------HHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCH--------HHHHHHH------HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_conf             966899999999999999876274--------8799999------99999999999999887017877999999999999


Q ss_pred             HHHHC--------------CHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             88816--------------9789999999998-03991368899999999883431036812387889989999998623
Q 001563          987 SLILI--------------SEQVFSDLKAQIL-TSQPVDQHQRLSVCFDKLMADVARSLDSKNRDKFTQNLTVFRHEFRV 1051 (1052)
Q Consensus       987 ~li~~--------------~~~~f~~l~~~li-~~q~~~~~~~l~~af~~L~~~i~~~l~~~~r~~F~~nl~~F~~~vr~ 1051 (1052)
                      .++-.              ++.+..++..+++ +..|.-..+.+...-..|.+      ...++.+|++++..|+-.+|.
T Consensus       245 ~ive~~~i~~~l~~~~~~~n~~~l~e~l~~lL~~~Fp~l~~~qi~~fv~~Lf~------~~~d~~~Fk~~lrDFLI~~ke  318 (321)
T d1w9ca_         245 NLVEEGKISTSLNPGNPVNNQIFLQEYVANLLKSAFPHLQDAQVKLFVTGLFS------LNQDIPAFKEHLRDFLVQIKE  318 (321)
T ss_dssp             HHHHTTCCCSCSCSSSCCCHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHH------TTTCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHHHHH
T ss_conf             99980544455553445545999999999999975789999999999999987------448799999999889687650

PyMOL of d1w9ca_

>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure