Citrus Sinensis ID: 001568

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050-
MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFVGRNRRLSGKKEKTA
ccccccccccccHHHHHHHHcccccccccHHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHEEEcccHHHHHHHHHccccccCEEEEcccccccccccccccccEEEEccccccccccccccEEEccEEECccccccccccccccccccccccccccccccEEEEccEEEEcEEEEEEEEccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccEEEccccccccccccEEEEEEEEccccccccEEEEECccccccccccccccccccccHHHHHHHHHHHHccccCEECccccEEECcccHHHHHHHHHHHcccccccccccccHHHHHHHHcccccccccccHHHHHHHccccEEEccccccccEEEEEEcccccCEEEEcccHHHHHHHccccccccccEECccHHHHHHHHHHHHHHHHHHcHHHEEEEEcccccccccccccccccccccccccccccccccEEEEEEcccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccccccccccccccECcHHHccccHHHHHHHHHHccccEEEcccccHHHHHHHHHHHcccEEEEccccccccHHHcccccccccccccHHHHHHHccHHHcccccHHHHHHHHHcHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHccccHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
****PFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI*********TPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFVGR************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxx
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MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFGSIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECLIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKIDDALINSWVLLRYLVIGSYVGIATVGIFVLWYTKGSFMGINLVGDGHTLVTLPQLRNWGECSTWSNFTVAPYAVGGGQMITFSNPCDYFTIGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLVTMPPWRNPWLLVAMSVSLGLHCLILYVPFLADVFGVVPLNLNEWFLVILVSAPVILIDEVLKFVGRNRRLSGKKEKTA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Calcium-transporting ATPase 2, endoplasmic reticulum-type This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment.confidentO23087
Calcium-transporting ATPase, endoplasmic reticulum-type This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment.probableQ42883
Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Isoform SERCA2A is involved in the regulation of the contraction/relaxation cycle.probableP11607

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.6.-.-Acting on acid anhydrides.probable
3.6.3.-3'-nucleotidase.probable
3.6.3.8Transferred entry: 3.6.3.8.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3B8C, chain A
Confidence level:very confident
Coverage over the Query: 6-197,211-295,311-383,395-405,423-433,444-461,475-480,500-539,551-582,602-887,914-928,946-1042
View the alignment between query and template
View the model in PyMOL
Template: 1MHS, chain A
Confidence level:very confident
Coverage over the Query: 2-79,93-197,211-295,311-380,393-405,423-432,443-464,475-480,500-583,611-892,907-910,946-1050
View the alignment between query and template
View the model in PyMOL
Template: 3AR4, chain A
Confidence level:very confident
Coverage over the Query: 1-478,491-919,933-1041
View the alignment between query and template
View the model in PyMOL
Template: 3N23, chain A
Confidence level:confident
Coverage over the Query: 12-290,304-402,415-445,459-894,905-1049
View the alignment between query and template
View the model in PyMOL